Query 009183
Match_columns 541
No_of_seqs 417 out of 3516
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 21:26:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009183.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009183hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0509 Ankyrin repeat and DHH 100.0 4.5E-79 9.7E-84 601.1 28.4 487 25-535 43-599 (600)
2 KOG1314 DHHC-type Zn-finger pr 100.0 2.4E-43 5.3E-48 321.2 14.6 238 279-537 25-277 (414)
3 KOG1315 Predicted DHHC-type Zn 100.0 8.9E-42 1.9E-46 319.1 17.3 218 309-539 50-270 (307)
4 KOG1311 DHHC-type Zn-finger pr 100.0 1E-39 2.2E-44 317.2 20.5 163 365-537 113-277 (299)
5 PF01529 zf-DHHC: DHHC palmito 100.0 1E-39 2.3E-44 293.1 11.6 172 320-493 2-174 (174)
6 KOG4412 26S proteasome regulat 100.0 9.4E-39 2E-43 265.8 15.7 208 26-237 3-213 (226)
7 PHA02791 ankyrin-like protein; 100.0 1.3E-36 2.9E-41 289.8 24.0 230 7-253 13-245 (284)
8 KOG1313 DHHC-type Zn-finger pr 100.0 2.2E-37 4.9E-42 273.5 13.3 173 366-541 103-295 (309)
9 PHA03100 ankyrin repeat protei 100.0 5.2E-36 1.1E-40 314.3 24.6 244 5-252 47-307 (480)
10 PHA02874 ankyrin repeat protei 100.0 2.8E-35 6.1E-40 303.6 27.9 261 3-279 11-296 (434)
11 PHA03100 ankyrin repeat protei 100.0 2.3E-35 5E-40 309.4 25.0 258 9-280 18-292 (480)
12 KOG0509 Ankyrin repeat and DHH 100.0 2.4E-35 5.3E-40 291.8 23.0 335 60-424 44-383 (600)
13 PHA03095 ankyrin-like protein; 100.0 6.5E-35 1.4E-39 305.4 27.0 263 4-280 25-299 (471)
14 PHA02875 ankyrin repeat protei 100.0 7.9E-35 1.7E-39 299.0 27.1 226 26-255 2-229 (413)
15 PHA02874 ankyrin repeat protei 100.0 1E-34 2.2E-39 299.5 26.2 245 3-252 45-313 (434)
16 PHA02946 ankyin-like protein; 100.0 6.6E-35 1.4E-39 298.5 24.4 243 5-251 51-320 (446)
17 PHA03095 ankyrin-like protein; 100.0 1.2E-34 2.6E-39 303.3 25.5 246 5-254 62-316 (471)
18 PHA02716 CPXV016; CPX019; EVM0 100.0 6.9E-35 1.5E-39 306.8 23.1 245 5-253 191-565 (764)
19 PHA02716 CPXV016; CPX019; EVM0 100.0 1.8E-34 3.8E-39 303.7 25.1 265 4-280 153-544 (764)
20 PHA02878 ankyrin repeat protei 100.0 2.1E-34 4.5E-39 300.7 25.2 210 22-237 33-309 (477)
21 KOG4412 26S proteasome regulat 100.0 1E-35 2.2E-40 247.8 11.2 189 12-202 23-213 (226)
22 PHA02791 ankyrin-like protein; 100.0 6.6E-34 1.4E-38 271.2 24.9 210 36-255 9-221 (284)
23 KOG0510 Ankyrin repeat protein 100.0 2.1E-34 4.6E-39 290.0 19.7 268 5-281 100-387 (929)
24 COG5273 Uncharacterized protei 100.0 1.2E-34 2.6E-39 276.9 15.4 200 310-522 61-278 (309)
25 PHA02946 ankyin-like protein; 100.0 2.6E-33 5.7E-38 286.7 26.1 221 26-252 37-267 (446)
26 PHA02876 ankyrin repeat protei 100.0 3.2E-33 6.9E-38 304.3 27.1 264 3-280 155-485 (682)
27 PHA02875 ankyrin repeat protei 100.0 9.9E-33 2.1E-37 283.5 25.5 244 3-248 12-261 (413)
28 PHA02798 ankyrin-like protein; 100.0 6.4E-33 1.4E-37 290.0 23.1 213 38-254 50-317 (489)
29 PHA02989 ankyrin repeat protei 100.0 1.3E-32 2.8E-37 288.1 24.8 242 5-252 15-313 (494)
30 PHA02876 ankyrin repeat protei 100.0 7.1E-32 1.5E-36 293.7 25.8 239 10-253 257-499 (682)
31 PHA02878 ankyrin repeat protei 100.0 3.4E-31 7.4E-36 276.5 27.3 237 29-280 3-309 (477)
32 KOG0510 Ankyrin repeat protein 100.0 4.4E-32 9.5E-37 273.4 19.1 247 6-254 134-403 (929)
33 PHA02989 ankyrin repeat protei 100.0 2.9E-31 6.3E-36 277.8 25.5 235 33-281 10-299 (494)
34 KOG1312 DHHC-type Zn-finger pr 100.0 2.8E-32 6.1E-37 242.3 14.2 103 315-427 108-210 (341)
35 PHA02798 ankyrin-like protein; 100.0 1.6E-30 3.4E-35 271.9 23.6 230 37-280 16-300 (489)
36 KOG0508 Ankyrin repeat protein 100.0 2.4E-31 5.3E-36 252.4 14.8 216 30-249 8-236 (615)
37 PHA02917 ankyrin-like protein; 100.0 2.5E-29 5.4E-34 266.9 22.2 242 7-253 13-301 (661)
38 PHA02859 ankyrin repeat protei 100.0 1E-28 2.2E-33 227.5 20.7 174 59-238 20-202 (209)
39 PHA02859 ankyrin repeat protei 100.0 1.3E-28 2.8E-33 226.8 20.8 177 23-204 18-203 (209)
40 PHA02795 ankyrin-like protein; 100.0 1.8E-28 3.9E-33 242.3 21.3 207 38-254 60-288 (437)
41 KOG0508 Ankyrin repeat protein 100.0 1.9E-29 4.1E-34 239.6 13.7 192 22-215 38-237 (615)
42 KOG4177 Ankyrin [Cell wall/mem 100.0 4.3E-30 9.2E-35 275.2 10.2 244 7-253 355-631 (1143)
43 PHA02917 ankyrin-like protein; 100.0 2.8E-28 6E-33 259.0 23.9 205 39-249 12-252 (661)
44 PHA02730 ankyrin-like protein; 100.0 1.5E-27 3.3E-32 246.7 22.5 246 4-254 166-524 (672)
45 PHA02795 ankyrin-like protein; 100.0 4E-27 8.6E-32 232.7 20.0 182 32-217 83-286 (437)
46 PHA02792 ankyrin-like protein; 100.0 3.6E-27 7.8E-32 241.3 20.0 228 4-237 83-452 (631)
47 PHA02792 ankyrin-like protein; 100.0 9.7E-27 2.1E-31 238.1 22.4 256 9-280 57-452 (631)
48 PHA02730 ankyrin-like protein; 99.9 2.1E-26 4.5E-31 238.3 22.5 205 42-249 23-258 (672)
49 TIGR00870 trp transient-recept 99.9 1.9E-25 4.1E-30 245.3 25.7 226 22-252 13-281 (743)
50 KOG4177 Ankyrin [Cell wall/mem 99.9 2.5E-26 5.4E-31 246.5 17.2 236 4-240 418-656 (1143)
51 KOG0502 Integral membrane anky 99.9 1.4E-26 3.1E-31 199.1 11.4 221 23-248 59-279 (296)
52 KOG0502 Integral membrane anky 99.9 2.1E-26 4.6E-31 198.0 8.0 216 11-233 81-296 (296)
53 PLN03192 Voltage-dependent pot 99.9 8.5E-25 1.8E-29 241.4 22.8 178 57-239 522-700 (823)
54 PLN03192 Voltage-dependent pot 99.9 4.4E-24 9.4E-29 235.7 21.8 179 22-204 521-700 (823)
55 KOG0507 CASK-interacting adapt 99.9 1.6E-24 3.6E-29 217.4 13.8 229 16-249 39-278 (854)
56 KOG0505 Myosin phosphatase, re 99.9 1.8E-24 4E-29 210.2 13.4 206 28-238 42-274 (527)
57 KOG0507 CASK-interacting adapt 99.9 3E-24 6.4E-29 215.6 14.3 222 27-252 4-245 (854)
58 TIGR00870 trp transient-recept 99.9 1.3E-22 2.8E-27 223.0 15.9 207 4-216 28-280 (743)
59 PHA02743 Viral ankyrin protein 99.9 2.5E-22 5.4E-27 178.0 14.5 145 50-194 10-162 (166)
60 KOG0514 Ankyrin repeat protein 99.9 1.2E-22 2.5E-27 187.7 11.1 163 86-251 261-430 (452)
61 PHA02743 Viral ankyrin protein 99.9 1.4E-21 3.1E-26 173.1 14.6 146 82-230 9-163 (166)
62 KOG0514 Ankyrin repeat protein 99.9 9.1E-22 2E-26 181.9 11.4 162 52-215 260-429 (452)
63 KOG0512 Fetal globin-inducing 99.9 2.2E-21 4.8E-26 161.0 12.0 147 25-171 62-209 (228)
64 PHA02741 hypothetical protein; 99.9 5.9E-21 1.3E-25 170.1 14.2 130 54-183 15-155 (169)
65 PHA02884 ankyrin repeat protei 99.9 1.5E-20 3.2E-25 179.4 17.3 155 54-217 26-186 (300)
66 PHA02741 hypothetical protein; 99.8 4.7E-20 1E-24 164.3 15.2 129 122-252 17-156 (169)
67 KOG4369 RTK signaling protein 99.8 2E-21 4.3E-26 200.8 5.7 225 25-253 756-984 (2131)
68 PHA02736 Viral ankyrin protein 99.8 2.8E-20 6E-25 163.4 10.4 95 90-184 52-150 (154)
69 PHA02884 ankyrin repeat protei 99.8 2.8E-19 6E-24 170.7 17.8 156 86-252 25-186 (300)
70 KOG3676 Ca2+-permeable cation 99.8 4.2E-19 9.1E-24 181.3 19.0 214 28-252 103-332 (782)
71 PHA02736 Viral ankyrin protein 99.8 1.1E-19 2.4E-24 159.6 10.8 128 88-218 12-151 (154)
72 KOG4369 RTK signaling protein 99.8 2.3E-20 5.1E-25 193.0 7.2 249 3-252 767-1018(2131)
73 KOG0512 Fetal globin-inducing 99.8 8.9E-19 1.9E-23 145.7 13.1 142 96-239 66-209 (228)
74 KOG0505 Myosin phosphatase, re 99.8 1.4E-19 3.1E-24 176.3 8.8 191 11-203 58-274 (527)
75 KOG0195 Integrin-linked kinase 99.8 4.5E-19 9.8E-24 159.0 7.1 159 29-188 3-161 (448)
76 KOG0195 Integrin-linked kinase 99.7 8.4E-18 1.8E-22 151.0 7.2 123 79-202 20-142 (448)
77 PF12796 Ank_2: Ankyrin repeat 99.7 7.9E-17 1.7E-21 127.3 10.7 89 30-123 1-89 (89)
78 cd00204 ANK ankyrin repeats; 99.7 3.7E-16 7.9E-21 131.8 15.2 122 57-179 4-125 (126)
79 cd00204 ANK ankyrin repeats; 99.7 6.8E-16 1.5E-20 130.2 15.1 122 90-212 4-125 (126)
80 PF12796 Ank_2: Ankyrin repeat 99.7 2.2E-16 4.8E-21 124.7 11.0 89 64-157 1-89 (89)
81 KOG3676 Ca2+-permeable cation 99.7 7.5E-16 1.6E-20 157.8 16.2 163 19-182 136-330 (782)
82 KOG4214 Myotrophin and similar 99.6 5.2E-15 1.1E-19 109.9 8.4 103 28-132 4-106 (117)
83 COG0666 Arp FOG: Ankyrin repea 99.5 2.2E-13 4.8E-18 127.8 15.1 127 89-216 69-203 (235)
84 KOG4214 Myotrophin and similar 99.5 4.3E-14 9.4E-19 105.1 7.7 103 129-235 5-107 (117)
85 COG0666 Arp FOG: Ankyrin repea 99.5 6E-13 1.3E-17 124.9 17.1 130 53-183 66-203 (235)
86 KOG1710 MYND Zn-finger and ank 99.5 3.5E-13 7.6E-18 121.5 11.6 121 25-146 11-132 (396)
87 KOG0515 p53-interacting protei 99.4 8.6E-13 1.9E-17 128.1 9.9 119 27-146 551-672 (752)
88 PF13857 Ank_5: Ankyrin repeat 99.4 5E-13 1.1E-17 94.6 4.9 55 46-100 2-56 (56)
89 PF13637 Ank_4: Ankyrin repeat 99.4 1E-12 2.3E-17 92.5 6.4 54 60-113 1-54 (54)
90 KOG1710 MYND Zn-finger and ank 99.4 3.3E-12 7.1E-17 115.3 11.1 122 127-251 13-135 (396)
91 PTZ00322 6-phosphofructo-2-kin 99.4 6.6E-12 1.4E-16 135.2 15.5 106 63-168 85-196 (664)
92 PF13637 Ank_4: Ankyrin repeat 99.4 1.7E-12 3.6E-17 91.5 6.6 54 160-213 1-54 (54)
93 PTZ00322 6-phosphofructo-2-kin 99.4 3.1E-12 6.7E-17 137.7 11.8 105 29-134 85-196 (664)
94 PF13857 Ank_5: Ankyrin repeat 99.4 8.7E-13 1.9E-17 93.3 4.9 55 79-133 1-56 (56)
95 KOG0515 p53-interacting protei 99.3 2.2E-11 4.8E-16 118.5 9.7 120 130-251 554-675 (752)
96 KOG0818 GTPase-activating prot 98.9 3.9E-09 8.5E-14 102.3 9.6 99 152-252 119-224 (669)
97 KOG0783 Uncharacterized conser 98.9 1.2E-09 2.5E-14 112.1 3.9 87 150-238 42-129 (1267)
98 KOG0782 Predicted diacylglycer 98.8 1.2E-08 2.6E-13 100.4 9.2 118 30-148 870-989 (1004)
99 KOG0782 Predicted diacylglycer 98.8 1.4E-08 3.1E-13 99.9 9.1 120 130-252 870-991 (1004)
100 KOG0818 GTPase-activating prot 98.8 3E-08 6.6E-13 96.3 9.8 95 53-147 120-221 (669)
101 KOG0783 Uncharacterized conser 98.7 9.2E-09 2E-13 105.7 5.1 100 36-135 27-128 (1267)
102 KOG0506 Glutaminase (contains 98.7 1.6E-08 3.5E-13 97.8 5.4 95 157-252 503-597 (622)
103 PF13606 Ank_3: Ankyrin repeat 98.7 2.1E-08 4.5E-13 60.3 3.9 28 60-87 2-29 (30)
104 PF13606 Ank_3: Ankyrin repeat 98.6 4.9E-08 1.1E-12 58.7 3.9 29 92-120 1-29 (30)
105 PF00023 Ank: Ankyrin repeat H 98.6 6.1E-08 1.3E-12 60.1 4.2 31 60-90 2-32 (33)
106 KOG0506 Glutaminase (contains 98.6 5E-08 1.1E-12 94.4 5.4 90 125-215 505-595 (622)
107 PF00023 Ank: Ankyrin repeat H 98.6 1.1E-07 2.5E-12 58.9 4.4 33 92-124 1-33 (33)
108 KOG3609 Receptor-activated Ca2 98.5 5.9E-07 1.3E-11 93.9 11.2 125 22-154 21-158 (822)
109 KOG0705 GTPase-activating prot 98.4 1.2E-06 2.7E-11 87.0 9.5 82 66-147 630-715 (749)
110 KOG0522 Ankyrin repeat protein 98.3 1.5E-06 3.3E-11 86.0 8.0 88 129-216 23-111 (560)
111 KOG0522 Ankyrin repeat protein 98.3 1E-06 2.2E-11 87.2 6.6 88 28-115 22-110 (560)
112 KOG0705 GTPase-activating prot 98.2 5.2E-06 1.1E-10 82.6 8.4 89 96-185 627-719 (749)
113 KOG0520 Uncharacterized conser 98.2 2.5E-06 5.4E-11 91.3 6.3 128 123-250 571-702 (975)
114 KOG0521 Putative GTPase activa 98.1 2.6E-06 5.7E-11 91.7 4.4 91 158-250 654-744 (785)
115 KOG3609 Receptor-activated Ca2 98.0 3.9E-05 8.6E-10 80.6 12.0 120 63-189 28-160 (822)
116 KOG2384 Major histocompatibili 98.0 1.5E-05 3.3E-10 68.5 6.9 64 52-115 4-68 (223)
117 KOG2384 Major histocompatibili 98.0 1.9E-05 4.1E-10 67.9 6.3 79 83-162 2-81 (223)
118 KOG0511 Ankyrin repeat protein 97.9 3.4E-05 7.3E-10 73.2 8.3 71 27-98 37-107 (516)
119 KOG0520 Uncharacterized conser 97.9 1.1E-05 2.4E-10 86.5 5.4 123 57-180 571-700 (975)
120 KOG0521 Putative GTPase activa 97.9 1.1E-05 2.3E-10 87.2 4.7 83 92-175 655-737 (785)
121 KOG0511 Ankyrin repeat protein 97.7 0.00011 2.3E-09 69.9 7.2 74 62-136 38-111 (516)
122 smart00248 ANK ankyrin repeats 96.7 0.0033 7.1E-08 36.5 3.9 27 60-86 2-28 (30)
123 KOG2505 Ankyrin repeat protein 96.5 0.0054 1.2E-07 60.9 6.5 71 173-248 404-480 (591)
124 smart00248 ANK ankyrin repeats 96.3 0.0065 1.4E-07 35.1 3.9 28 93-120 2-29 (30)
125 KOG2505 Ankyrin repeat protein 96.1 0.0067 1.4E-07 60.2 4.5 64 71-134 402-471 (591)
126 COG5273 Uncharacterized protei 96.0 0.09 1.9E-06 51.1 11.8 126 360-496 118-248 (309)
127 PF03158 DUF249: Multigene fam 95.4 0.35 7.5E-06 42.2 11.5 138 62-213 48-190 (192)
128 PF06128 Shigella_OspC: Shigel 94.0 0.44 9.6E-06 42.9 9.1 111 28-147 155-275 (284)
129 PF06128 Shigella_OspC: Shigel 93.6 0.66 1.4E-05 41.8 9.4 113 96-217 156-278 (284)
130 PF03158 DUF249: Multigene fam 92.5 1.5 3.3E-05 38.4 9.8 138 95-249 48-191 (192)
131 PF11929 DUF3447: Domain of un 92.1 0.4 8.7E-06 35.9 5.3 48 95-149 8-55 (76)
132 KOG1311 DHHC-type Zn-finger pr 89.9 0.75 1.6E-05 44.9 6.4 43 377-419 111-164 (299)
133 PF11929 DUF3447: Domain of un 88.8 1 2.2E-05 33.7 4.9 45 64-115 10-54 (76)
134 PF01529 zf-DHHC: DHHC palmito 87.8 4.1 8.8E-05 36.0 9.1 62 361-433 58-119 (174)
135 KOG3614 Ca2+/Mg2+-permeable ca 86.7 8.1 0.00018 44.2 12.1 25 62-86 427-451 (1381)
136 PF13240 zinc_ribbon_2: zinc-r 84.5 0.53 1.1E-05 26.0 1.0 21 367-387 1-21 (23)
137 PRK04136 rpl40e 50S ribosomal 83.1 0.62 1.3E-05 30.6 1.0 22 366-387 15-36 (48)
138 KOG1314 DHHC-type Zn-finger pr 81.7 11 0.00024 36.6 9.0 82 318-419 66-148 (414)
139 PF13248 zf-ribbon_3: zinc-rib 81.3 0.92 2E-05 25.9 1.2 22 366-387 3-24 (26)
140 PTZ00303 phosphatidylinositol 81.1 0.9 1.9E-05 48.1 1.9 31 357-387 450-489 (1374)
141 PF12773 DZR: Double zinc ribb 66.8 4.2 9E-05 27.4 1.8 34 365-398 12-48 (50)
142 PHA02680 ORF090 IMV phosphoryl 66.1 36 0.00079 25.7 6.5 23 471-493 62-84 (91)
143 COG1552 RPL40A Ribosomal prote 64.4 1.4 3E-05 29.0 -0.9 22 366-387 15-36 (50)
144 PF10571 UPF0547: Uncharacteri 63.3 4.2 9E-05 23.2 1.0 21 367-387 2-22 (26)
145 KOG1842 FYVE finger-containing 61.9 2.8 6.2E-05 41.6 0.3 25 365-389 180-206 (505)
146 PF01020 Ribosomal_L40e: Ribos 58.2 4.2 9.2E-05 27.3 0.5 23 366-388 18-42 (52)
147 PRK15103 paraquat-inducible me 57.6 2.3E+02 0.005 29.1 13.7 31 366-396 222-252 (419)
148 KOG3183 Predicted Zn-finger pr 57.3 4 8.7E-05 37.1 0.4 12 389-400 38-49 (250)
149 PF14015 DUF4231: Protein of u 57.2 83 0.0018 25.1 8.2 32 469-500 66-98 (112)
150 KOG1315 Predicted DHHC-type Zn 54.9 77 0.0017 30.8 8.6 65 359-434 117-181 (307)
151 PF00641 zf-RanBP: Zn-finger i 54.2 4.8 0.0001 23.8 0.3 21 367-387 6-26 (30)
152 PF08600 Rsm1: Rsm1-like; Int 49.3 6.6 0.00014 30.5 0.4 12 394-405 56-67 (91)
153 PF06906 DUF1272: Protein of u 46.9 15 0.00032 25.3 1.7 35 368-405 8-50 (57)
154 PF12773 DZR: Double zinc ribb 46.0 15 0.00033 24.6 1.8 22 365-386 29-50 (50)
155 TIGR00155 pqiA_fam integral me 45.5 3.5E+02 0.0076 27.6 13.4 31 366-396 216-247 (403)
156 PF01363 FYVE: FYVE zinc finge 44.4 9.7 0.00021 27.6 0.6 25 365-389 9-35 (69)
157 smart00064 FYVE Protein presen 44.1 15 0.00032 26.5 1.6 24 366-389 11-36 (68)
158 cd07920 Pumilio Pumilio-family 39.8 2.2E+02 0.0048 27.8 9.7 218 22-240 17-249 (322)
159 cd01995 ExsB ExsB is a transcr 36.1 17 0.00036 31.9 0.9 22 368-392 143-164 (169)
160 PF00751 DM: DM DNA binding do 34.9 13 0.00029 24.7 0.1 22 379-400 2-28 (47)
161 KOG0513 Ca2+-independent phosp 33.2 13 0.00027 38.9 -0.4 47 160-206 136-182 (503)
162 KOG1729 FYVE finger containing 31.2 16 0.00036 35.0 0.1 28 364-391 167-197 (288)
163 PF09889 DUF2116: Uncharacteri 30.7 90 0.0019 22.0 3.6 22 366-387 4-26 (59)
164 PF04053 Coatomer_WDAD: Coatom 30.7 65 0.0014 33.3 4.3 162 29-216 267-429 (443)
165 cd07920 Pumilio Pumilio-family 29.9 5.2E+02 0.011 25.0 11.3 219 24-243 55-294 (322)
166 PF02150 RNA_POL_M_15KD: RNA p 29.6 13 0.00029 22.9 -0.5 8 366-373 2-9 (35)
167 PF01437 PSI: Plexin repeat; 29.0 24 0.00052 23.8 0.5 18 383-400 6-23 (51)
168 KOG1709 Guanidinoacetate methy 28.8 49 0.0011 30.2 2.6 39 180-218 2-40 (271)
169 PF09297 zf-NADH-PPase: NADH p 28.4 22 0.00048 21.3 0.3 22 365-386 3-28 (32)
170 smart00547 ZnF_RBZ Zinc finger 28.4 26 0.00057 19.6 0.6 21 367-387 4-24 (26)
171 PF07282 OrfB_Zn_ribbon: Putat 28.2 27 0.00058 25.3 0.8 24 365-388 28-55 (69)
172 KOG4591 Uncharacterized conser 28.1 47 0.001 29.6 2.3 49 191-239 220-271 (280)
173 smart00661 RPOL9 RNA polymeras 27.7 29 0.00064 23.3 0.8 20 367-386 2-27 (52)
174 PF07010 Endomucin: Endomucin; 26.7 1.6E+02 0.0035 26.9 5.3 23 319-341 208-230 (259)
175 COG1579 Zn-ribbon protein, pos 26.4 67 0.0015 29.9 3.1 45 320-392 180-234 (239)
176 PF09788 Tmemb_55A: Transmembr 25.7 1.8E+02 0.0039 27.2 5.7 28 402-429 188-216 (256)
177 KOG1709 Guanidinoacetate methy 25.2 61 0.0013 29.6 2.5 40 79-118 1-40 (271)
178 PLN00186 ribosomal protein S26 23.9 28 0.00061 27.6 0.2 15 378-392 19-33 (109)
179 TIGR00364 exsB protein. This p 23.5 42 0.0009 30.4 1.3 13 379-391 189-201 (201)
180 smart00423 PSI domain found in 23.5 46 0.001 21.8 1.2 16 384-399 6-21 (46)
181 PF07649 C1_3: C1-like domain; 23.3 28 0.00062 20.4 0.1 21 367-387 2-23 (30)
182 PF06508 QueC: Queuosine biosy 22.9 41 0.0009 30.7 1.1 25 366-392 178-203 (209)
183 cd00065 FYVE FYVE domain; Zinc 22.5 36 0.00079 23.3 0.5 23 366-388 3-27 (57)
184 PF12514 DUF3718: Protein of u 22.4 1.1E+02 0.0025 22.2 3.1 48 32-79 3-54 (68)
185 COG0603 Predicted PP-loop supe 22.3 43 0.00093 30.8 1.1 19 374-392 187-205 (222)
186 smart00301 DM Doublesex DNA-bi 22.0 41 0.00089 23.1 0.6 6 395-400 23-28 (54)
187 KOG3836 HLH transcription fact 21.7 20 0.00044 37.6 -1.2 49 67-115 403-451 (605)
188 PRK09335 30S ribosomal protein 21.5 31 0.00067 26.7 0.0 21 378-398 19-39 (95)
189 KOG1818 Membrane trafficking a 21.3 38 0.00083 36.1 0.6 22 366-387 166-189 (634)
190 PRK05978 hypothetical protein; 21.1 3.6E+02 0.0079 23.1 6.3 30 366-395 34-65 (148)
191 KOG1398 Uncharacterized conser 21.0 50 0.0011 32.7 1.2 26 375-406 10-35 (460)
192 PRK00432 30S ribosomal protein 20.9 54 0.0012 22.2 1.1 22 365-386 20-44 (50)
193 PTZ00172 40S ribosomal protein 20.7 33 0.00072 27.2 0.0 15 378-392 19-33 (108)
No 1
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=4.5e-79 Score=601.11 Aligned_cols=487 Identities=34% Similarity=0.570 Sum_probs=348.4
Q ss_pred cchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCC-CCchHHHHHHHh
Q 009183 25 AAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDN-NGQTALHWAAVR 103 (541)
Q Consensus 25 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~-~g~tpL~~A~~~ 103 (541)
.....++.|++.|+++.++.+++..+.+++..|.+|.|+|||||.+|+.+++++|+++|+++|..+. -+.||||||+++
T Consensus 43 ~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~ 122 (600)
T KOG0509|consen 43 SSLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN 122 (600)
T ss_pred hhhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc
Confidence 3466789999999999999999988999999999999999999999999999999999999999985 589999999999
Q ss_pred CCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcC
Q 009183 104 GSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRD 183 (541)
Q Consensus 104 g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 183 (541)
|+..++++|+++|||++.+|.+|.+|+|.|++.|+...+.||+.+ +.++|.+|.+|+||||||+++|....++.|++.|
T Consensus 123 G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~-~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~ 201 (600)
T KOG0509|consen 123 GHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSK-GADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFG 201 (600)
T ss_pred CcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHh-cccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999998 7999999999999999999999988799999999
Q ss_pred CCCCccc-CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhhhcc----ccc
Q 009183 184 ASQGRQD-KDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQHMHR----NHW 258 (541)
Q Consensus 184 ~~~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~~----~~~ 258 (541)
+.+..+| .+|+||||+|+..|+..++++|++.|+ +.+..|.+|+||+++|.++ .++..+........ ..|
T Consensus 202 a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~--~~d~~~~~g~tp~~LA~~~---~~~~~~~h~~~~~~~~~~~K~ 276 (600)
T KOG0509|consen 202 ASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGA--DLDKTNTNGKTPFDLAQER---KLVAALHHDVVERLGKVVKKW 276 (600)
T ss_pred ccccccccccCCchHHHHHhcCCcceEehhhhcCC--cccccccCCCCHHHHHHHh---hhHHHhhccHHHhhcccccch
Confidence 9999998 779999999999999999996666666 6667888899999999888 22222211111000 000
Q ss_pred ccccccccccCC---C-------CchhHHHHHHHHHHHHhc-----ee--------------eccCcccchhhhhhhHH-
Q 009183 259 GDKICGRKTSDI---G-------YAPILFSIIILCIILFIN-----SV--------------VAAPRLTKVTAVLGLWS- 308 (541)
Q Consensus 259 ~~~~~~~~~~~l---g-------~~~l~~~~i~~~~~~f~~-----~~--------------~~~~~~~~~~~~~~~~~- 308 (541)
..+........+ + ..|-.+.++.. ++++.. .+ ...+..........+|.
T Consensus 277 ~~~~~~~~~~~f~~~~~~~~~~~~~~g~i~~~~~-~w~i~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fw~~ 355 (600)
T KOG0509|consen 277 FLGSKLAALIFFIFLGLFYFISSWLPGVIFLINS-LWLIKGLALGKLVLTCLCATRKIVGFLLRPPLLSGFFLSTLFWFY 355 (600)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhhccchhhhhhh-HHHHhhhhhhhhhhheeccchhhccccccchhHHHHHHHHHHHHH
Confidence 000000000000 0 00000000000 000000 00 00000001111111111
Q ss_pred ----------------HHHHHHHHHHHHHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCCCCcCCccc-cccccc
Q 009183 309 ----------------WTVVSLAVGSLIMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNSPIWTGNWS-QLCPTC 371 (541)
Q Consensus 309 ----------------~~~~~~~~~~~~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~C 371 (541)
+.+++..+..+++|.++..+|||++|....... +...++.+.. +.+.+ +||.+|
T Consensus 356 ~~w~~~i~~~~~~~~~~~~i~~~l~~~~~f~~~~rsDPg~i~~~~~~~~--~tIs~l~d~g-------kf~~en~FC~~c 426 (600)
T KOG0509|consen 356 YFWFSKITPYTLFDFHYCFIISVLAYFITFGLFLRSDPGFIPTSTEVGR--ETISQLIDFG-------KFDLENRFCLTC 426 (600)
T ss_pred HhhheeccchhhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCchhhHH--HHHHHhhccc-------cccccccceeee
Confidence 122334555677788888899999998754321 1111222211 11223 699999
Q ss_pred cccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchhhhhc
Q 009183 372 KIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPHLPADGTWIHYVLV 451 (541)
Q Consensus 372 ~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (541)
.+.||.|||||++|||||.||||||||++||||.+|||+|+.|++.+...+.+.+....+++....... ..|.
T Consensus 427 lirKp~rSkhc~vcnrcVarfDHhCPwi~ncVG~kNh~~F~~Fl~~l~~~~~~~l~~~~~y~~~~~~~~--~~~~----- 499 (600)
T KOG0509|consen 427 LIRKPLRSKHCSVCNRCVARFDHHCPWIGNCVGLKNHRLFVFFLLTLLTVIVFYLYLCLYYIMNLENAS--TIYV----- 499 (600)
T ss_pred eeecCCccchhhhhHHHHhccccCCCccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH--HHHH-----
Confidence 999999999999999999999999999999999999999999999988887777777666665443321 0010
Q ss_pred chhHHHHHHHHHHH-------------HHHHHHH-HHHHHHHhhccchhHHhhhhcccccccCCCCCcCCCCChhHHhHH
Q 009183 452 HPGLVLFLVLDTII-------------LIAGTTL-TSIQAYQIARNITTNELANSVRYDYLRGPDGRFRNPYNHGCQKNC 517 (541)
Q Consensus 452 ~~~~~~~~~~~~~~-------------~~~~~~l-~~~~~~~i~~n~Tt~E~~~~~~~~~~~~~~~~~~n~f~~g~~~N~ 517 (541)
.+++.+.++...- ..+.... -+.|...++.++||+|.++..||+++.-+.+..++||+.|+.+|+
T Consensus 500 -~~l~~~~~~~~~~~~~~~~~~n~~~~~t~~~~~~~~~~~~~~c~~~tt~e~~n~~r~~~~~~~~~~~~~~~s~g~~~Nl 578 (600)
T KOG0509|consen 500 -GFLIAVQAFRIPKPVTGNLLGNEDLNPTWGSTSTKCQHYNCACLHLTTNEQINVKRYEHLGIKRGPTRSPFSPGPIRNL 578 (600)
T ss_pred -HHHHHHHHHhCCccceeeeeeccccccccccccccccccceeeecccHHHHHHHHHhhccccccCcCCCCCCchhhhcc
Confidence 0111111111100 0011112 233445588899999999999999998888889999999999999
Q ss_pred HHHhcC---CCCCCccccCCC
Q 009183 518 ADFFIH---GYTNDDELAWPP 535 (541)
Q Consensus 518 ~~~~~~---~~~~~~~~~~p~ 535 (541)
.+||-. +-..+...+|+.
T Consensus 579 ~df~~~~~~~~~~~~~~~~~~ 599 (600)
T KOG0509|consen 579 VDFFLCSDCNLPLNDRFLWDN 599 (600)
T ss_pred hheeecccCcCcchhhcccCC
Confidence 999932 334455556654
No 2
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=2.4e-43 Score=321.21 Aligned_cols=238 Identities=28% Similarity=0.435 Sum_probs=163.3
Q ss_pred HHHHHHHHHhceeeccCcccchhhhhhhHH-HHHHHHHHHHHHHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCC
Q 009183 279 IIILCIILFINSVVAAPRLTKVTAVLGLWS-WTVVSLAVGSLIMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNS 357 (541)
Q Consensus 279 ~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (541)
.++.....++++.+..|. .+..++.. ..+.+...+.++.|+.+++++||++|..+.++...++
T Consensus 25 t~i~~~~~~~n~lww~p~----ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D~------------ 88 (414)
T KOG1314|consen 25 TIITSTTGYMNSLWWFPL----SSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKDE------------ 88 (414)
T ss_pred HHHHHHHHHhhhhhhccc----cchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChhH------------
Confidence 344445556655544332 12222222 2344556778899999999999999999976432211
Q ss_pred CCcCCccccccccccccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHH-------H
Q 009183 358 PIWTGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIA-------I 430 (541)
Q Consensus 358 ~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~-------~ 430 (541)
...+||..|+-+|+||||||+.|||||.+|||||||+|||||..||-||+.||++..+.|+...++. +
T Consensus 89 -----~~lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~I 163 (414)
T KOG1314|consen 89 -----MFLQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGI 163 (414)
T ss_pred -----HHHHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHH
Confidence 1248999999999999999999999999999999999999999999999999999998665432221 2
Q ss_pred HHHHhCCCCCCCCcchhh-hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHhhh----hccc-ccccCCCCC
Q 009183 431 HRIWTAPHLPADGTWIHY-VLVHPGLVLFLVLDTIILIAGTTLTSIQAYQIARNITTNELAN----SVRY-DYLRGPDGR 504 (541)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~~~----~~~~-~~~~~~~~~ 504 (541)
+..|.........+...+ .......++.+.+++.+.+++++|++.|+..|++|+|.+|.+- ..|- .|..+..++
T Consensus 164 y~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~d~~~~ 243 (414)
T KOG1314|consen 164 YFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFNDDEGE 243 (414)
T ss_pred HHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhccCCCCc
Confidence 222211110000010000 0111223334445566677888999999999999999999886 2222 244444578
Q ss_pred cCCCCChhHHhHHHHHh-cCCCCCCccccCCCCC
Q 009183 505 FRNPYNHGCQKNCADFF-IHGYTNDDELAWPPLQ 537 (541)
Q Consensus 505 ~~n~f~~g~~~N~~~~~-~~~~~~~~~~~~p~~~ 537 (541)
+..|||.|+..|+++|| +.+..+.++..||...
T Consensus 244 f~ypydlgWr~n~r~vf~~~~~~~gdg~~wPv~~ 277 (414)
T KOG1314|consen 244 FTYPYDLGWRINLREVFFQNKKEEGDGIEWPVVE 277 (414)
T ss_pred eeeeccccccccHHHHhhhccccCCCCccccccC
Confidence 99999999777999999 4556778999999754
No 3
>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=8.9e-42 Score=319.11 Aligned_cols=218 Identities=25% Similarity=0.314 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCCCCc---CCccccccccccccCCCCCcCCccc
Q 009183 309 WTVVSLAVGSLIMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNSPIW---TGNWSQLCPTCKIIRPVRSKHCPAC 385 (541)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~C~~C~~~kp~Rs~HC~~C 385 (541)
..+.++.++.+++|++++++|||.+|..+..+.+..+............+.. ..-..|+|.+|+.+||+|||||++|
T Consensus 50 l~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdRaHHCsvC 129 (307)
T KOG1315|consen 50 LLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDRAHHCSVC 129 (307)
T ss_pred HHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccCcccccceeeEecCCCCceeecccccccCCccccchhh
Confidence 3455667788999999999999999988765443221110000000111111 1113599999999999999999999
Q ss_pred hhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchhhhhcchhHHHHHHHHHHH
Q 009183 386 KCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPHLPADGTWIHYVLVHPGLVLFLVLDTII 465 (541)
Q Consensus 386 ~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (541)
+|||+||||||||+|||||.+|||+|++|++|.++++++..+..+..+....... +.........+++.+++++.+
T Consensus 130 ~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~f 205 (307)
T KOG1315|consen 130 NRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVTTLIGFTKYFQGG----AGPSSLLLFFIVFLFLVAIAF 205 (307)
T ss_pred hhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----ccCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999776665544443221100 000001122344556666677
Q ss_pred HHHHHHHHHHHHHHhhccchhHHhhhhcccccccCCCCCcCCCCChhHHhHHHHHhcCCCCCCccccCCCCCcc
Q 009183 466 LIAGTTLTSIQAYQIARNITTNELANSVRYDYLRGPDGRFRNPYNHGCQKNCADFFIHGYTNDDELAWPPLQLA 539 (541)
Q Consensus 466 ~~~~~~l~~~~~~~i~~n~Tt~E~~~~~~~~~~~~~~~~~~n~f~~g~~~N~~~~~~~~~~~~~~~~~p~~~~~ 539 (541)
++.++.++++|+++|++|+||+|.++...+.. .+..+|.|+. ..|+.|+|+. ++..|+.|..-+.
T Consensus 206 ~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~~----~~~~~~~~~~--~~n~~~vfg~---~~~~wl~P~~~s~ 270 (307)
T KOG1315|consen 206 SISLSGLLCFHTYLILKNKTTIEAYKSPVFRS----GLHNKNGFNL--YVNFREVFGS---NLLYWLLPIDSSW 270 (307)
T ss_pred HHHHHHHHHHHHHHHHcCchhHhhhccccccc----cccccCCcce--eecHHHHhCC---CceEEeccccCcc
Confidence 77777799999999999999999887653221 2234566776 7999999976 6778888876543
No 4
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=100.00 E-value=1e-39 Score=317.16 Aligned_cols=163 Identities=31% Similarity=0.468 Sum_probs=125.2
Q ss_pred ccccccccccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Q 009183 365 SQLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPHLPADGT 444 (541)
Q Consensus 365 ~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (541)
.++|.+|+.+||+|||||++||+||+||||||||+|||||++|||||+.|++++.+.+++.+++.+..+...........
T Consensus 113 ~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 192 (299)
T KOG1311|consen 113 WKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVNL 192 (299)
T ss_pred eEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 48999999999999999999999999999999999999999999999999999999888888877776654322111111
Q ss_pred c-hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHhhhhcccccccCCCCCc-CCCCChhHHhHHHHHhc
Q 009183 445 W-IHYVLVHPGLVLFLVLDTIILIAGTTLTSIQAYQIARNITTNELANSVRYDYLRGPDGRF-RNPYNHGCQKNCADFFI 522 (541)
Q Consensus 445 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~~~~~~~~~~~~~~~~~-~n~f~~g~~~N~~~~~~ 522 (541)
+ ..........+++.++++++.+.++.|+.+|+++|.+|+||+|.++. +. .+. .+|||+|.++|++++|+
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~--~~------~~~~~~~~~~g~~~n~~~~~~ 264 (299)
T KOG1311|consen 193 TPVLIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKS--LD------FVSRSNPYDLGLLKNLQEVFG 264 (299)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhc--cc------cccccCCCchhHHHHHHHHhC
Confidence 1 01111122234445667777778889999999999999999998776 11 112 49999999999999996
Q ss_pred CCCCCCccccCCCCC
Q 009183 523 HGYTNDDELAWPPLQ 537 (541)
Q Consensus 523 ~~~~~~~~~~~p~~~ 537 (541)
. +....|+.|...
T Consensus 265 ~--~~~~~~~~p~~~ 277 (299)
T KOG1311|consen 265 G--PLPLSWLSPFAR 277 (299)
T ss_pred C--CCCccccccccc
Confidence 4 445667777664
No 5
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding
Probab=100.00 E-value=1e-39 Score=293.10 Aligned_cols=172 Identities=30% Similarity=0.527 Sum_probs=123.9
Q ss_pred HHHHHhhccCCCcccCCC-CCCCCCCCCCccccccCCCCCCcCCccccccccccccCCCCCcCCccchhhhhccCCcCce
Q 009183 320 IMFYRCSSKDPGYIKRSQ-DIDNHTDSEDPLLTIDLNNSPIWTGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPW 398 (541)
Q Consensus 320 ~~~~~~~~~dPG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w 398 (541)
++|+++.++|||++|+.. ..++.....+..........+.......++|.+|+++||+|||||+.||+||.||||||||
T Consensus 2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w 81 (174)
T PF01529_consen 2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW 81 (174)
T ss_pred EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence 457889999999999982 1111111111111111111122234456999999999999999999999999999999999
Q ss_pred eeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009183 399 ISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPHLPADGTWIHYVLVHPGLVLFLVLDTIILIAGTTLTSIQAY 478 (541)
Q Consensus 399 i~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 478 (541)
+|||||++|||+|++|+++.++.+++.....+..+...........+... .....++.++++++++++++.++++|++
T Consensus 82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 159 (174)
T PF01529_consen 82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSSFWIF--SNFSSIFLLIISIFFFIFVGFLLIFQLY 159 (174)
T ss_pred hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc--hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888887777666554332222221111 0011255666777888899999999999
Q ss_pred HhhccchhHHhhhhc
Q 009183 479 QIARNITTNELANSV 493 (541)
Q Consensus 479 ~i~~n~Tt~E~~~~~ 493 (541)
+|++|+||+|.+|++
T Consensus 160 ~i~~n~Tt~E~~~~~ 174 (174)
T PF01529_consen 160 LILRNITTYERIKRK 174 (174)
T ss_pred HHHcCCcHHHHHHcC
Confidence 999999999998863
No 6
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.4e-39 Score=265.85 Aligned_cols=208 Identities=29% Similarity=0.402 Sum_probs=195.0
Q ss_pred chhhHHHHHHcCCHHHHHHHHHhcCCCCccCCC-CCchHHHHHHHcCcHHHHHHHH-hCCCCCCCCCCCCchHHHHHHHh
Q 009183 26 AVTDVFSASAYGDFEKLRKFVEEDGASVSRPDG-NGYFALQWAALNNFADIAQYII-DHGGDVNATDNNGQTALHWAAVR 103 (541)
Q Consensus 26 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~-~g~t~Lh~A~~~~~~~iv~~Ll-~~g~~~~~~~~~g~tpL~~A~~~ 103 (541)
..++.+.+++......+++++++.+..++.++. +|+|||||||..|+.+++++|+ +.+..+|.+|..|+||||+||..
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~ 82 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN 82 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence 356778888999999999999988878888876 9999999999999999999999 56788899999999999999999
Q ss_pred CCHHHHHHHHhC-CCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhc
Q 009183 104 GSIAVADVLVQN-GARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFR 182 (541)
Q Consensus 104 g~~~~v~~Ll~~-g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 182 (541)
|+.++|+.|+.+ |+|++..++.|.|+||+|+..|..++++.|+++ |+.++.+|..|.||||-|+..|+.+++++|+..
T Consensus 83 g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~-ga~i~~kD~~~qtplHRAAavGklkvie~Li~~ 161 (226)
T KOG4412|consen 83 GNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK-GALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ 161 (226)
T ss_pred CcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc-CCCCcccccccCchhHHHHhccchhhHHHHHhc
Confidence 999999999998 999999999999999999999999999999988 899999999999999999999999999999999
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q 009183 183 DASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYD 237 (541)
Q Consensus 183 g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~ 237 (541)
|+.+|.+|..|+||||.|...|+.++...|+++|+ +...+|++| ||+..|+.
T Consensus 162 ~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gA--d~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 162 GAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGA--DTDREDKEG-TALRIACN 213 (226)
T ss_pred CCCCCcccccCccHHHHHHhccCchHHHHHHHhcc--ceeeccccC-chHHHHHH
Confidence 99999999999999999999999999999999998 667789988 99888763
No 7
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=289.78 Aligned_cols=230 Identities=17% Similarity=0.156 Sum_probs=201.9
Q ss_pred EEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCC
Q 009183 7 EVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDV 86 (541)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~ 86 (541)
++.+.|.+.+. ...+..|.||||.|+..|+.++++.|++. +++++..+ |.||||+|+..|+.+++++|+++|+++
T Consensus 13 ~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~-ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadv 87 (284)
T PHA02791 13 QLKSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLNA-GALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDD 87 (284)
T ss_pred HHHHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHC-cCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCC
Confidence 33444444333 35678899999999999999999988875 77887764 789999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCC-hHHHHHHHcCCHHHHHHHHHhcCCCcccCC-CCCCcHH
Q 009183 87 NATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGY-RAVHVAAQYGQTSFLNHIVAKYHADYDASD-NEGRSPL 164 (541)
Q Consensus 87 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~-t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~g~t~L 164 (541)
+.++..|.||||+|+..|+.++++.|+++|++++.++..|. ||||+|+..|+.+++++|+++ +.+ ..| ..|.|||
T Consensus 88 n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~-~~~--~~d~~~g~TpL 164 (284)
T PHA02791 88 SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPS--TFDLAILLSCI 164 (284)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc-CCc--ccccccCccHH
Confidence 99999999999999999999999999999999999998885 899999999999999999986 322 223 3589999
Q ss_pred HHHHHhCcHHHHHHHHhcCCCCCcccCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHH
Q 009183 165 HWAAYKGFADTIRLLLFRDASQGRQDKDGCTP-LHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQV 243 (541)
Q Consensus 165 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tp-Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i 243 (541)
|+|+..|+.+++++|+++|++++.+|..|.|| ||+|+.+|+.+++++|+++|+ +++.+|.+| +++ ++.|+
T Consensus 165 h~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga--~in~~~~~~-~~l------~~~e~ 235 (284)
T PHA02791 165 HITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDI--NIYSVNLEN-VLL------DDAEI 235 (284)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCC--CCccCcccC-ccC------CCHHH
Confidence 99999999999999999999999999999987 999999999999999999998 778899865 555 78899
Q ss_pred HHHHHHhhhh
Q 009183 244 ALYLSNAQHM 253 (541)
Q Consensus 244 ~~~L~~~~~~ 253 (541)
+++|+++-..
T Consensus 236 ~~~ll~~~~~ 245 (284)
T PHA02791 236 AKMIIEKHVE 245 (284)
T ss_pred HHHHHHhhhh
Confidence 9999976544
No 8
>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=273.50 Aligned_cols=173 Identities=28% Similarity=0.474 Sum_probs=127.5
Q ss_pred cccccccccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------
Q 009183 366 QLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPH------- 438 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~------- 438 (541)
.+|.+|.-+||||+|||++|||||++|||||||+|||||..|||||++|++++++++.+..+...+.......
T Consensus 103 SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~ta 182 (309)
T KOG1313|consen 103 SFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEITA 182 (309)
T ss_pred cHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 7899999999999999999999999999999999999999999999999999999998876665543321111
Q ss_pred CCCC--Ccch--h-----hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHhhhhccc--ccccCCCCCcCC
Q 009183 439 LPAD--GTWI--H-----YVLVHPGLVLFLVLDTIILIAGTTLTSIQAYQIARNITTNELANSVRY--DYLRGPDGRFRN 507 (541)
Q Consensus 439 ~~~~--~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~~~~~~~--~~~~~~~~~~~n 507 (541)
..++ ..+- . ......-++...++++.+.++++.+..+|.++|.++.|.+|.....+- .|+. +...|
T Consensus 183 y~~d~~h~~Pp~~i~r~~~~i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a---~~R~~ 259 (309)
T KOG1313|consen 183 YASDVAHVAPPPSILRVYKNITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQLINIKERKRYLA---HLRSN 259 (309)
T ss_pred ccCcccccCCChhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHH---hccCC
Confidence 1011 0010 0 011222234456677777888899999999999999999998764321 1221 22379
Q ss_pred CCChhHHhHHHHHhcC--CCCCCccccCCCCCccCC
Q 009183 508 PYNHGCQKNCADFFIH--GYTNDDELAWPPLQLAAG 541 (541)
Q Consensus 508 ~f~~g~~~N~~~~~~~--~~~~~~~~~~p~~~~~~~ 541 (541)
|++.|..+||+.|++. |++-+...+.|....|.|
T Consensus 260 ~~n~g~k~nWr~fLg~~~~r~~wk~v~lPt~~~p~~ 295 (309)
T KOG1313|consen 260 PTNFGGKANWRNFLGLFRGRHFWKTVLLPTIRKPVK 295 (309)
T ss_pred CcccchHHHHHHhhccccCCceeEEEeccccccccc
Confidence 9999999999999953 333344456798888875
No 9
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=5.2e-36 Score=314.29 Aligned_cols=244 Identities=26% Similarity=0.384 Sum_probs=139.9
Q ss_pred ceEEeeccccCCCCCCCCCCcchhhHHH-----HHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHH--HcCcHHHHH
Q 009183 5 EIEVVSSTEAIPNENQNDNQAAVTDVFS-----ASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAA--LNNFADIAQ 77 (541)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~~L~~-----A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~--~~~~~~iv~ 77 (541)
+.++++.+.+.+.+....+..+.+||+. |+..|+.++++.|++. |++++..|..|.||||+|+ ..|+.++++
T Consensus 47 ~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~-ga~i~~~d~~g~tpL~~A~~~~~~~~~iv~ 125 (480)
T PHA03100 47 NIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY-GANVNAPDNNGITPLLYAISKKSNSYSIVE 125 (480)
T ss_pred CHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHC-CCCCCCCCCCCCchhhHHHhcccChHHHHH
Confidence 3444455554444444444555555555 5555555555555543 5555555555555555555 555555555
Q ss_pred HHHhCCCCCCCCCCCCchHHHHHHHhC--CHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCccc
Q 009183 78 YIIDHGGDVNATDNNGQTALHWAAVRG--SIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDA 155 (541)
Q Consensus 78 ~Ll~~g~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~ 155 (541)
+|+++|++++..+..|.||||+|+..| +.+++++|+++|++++.+|..|.||||.|+..|+.+++++|++. |++++.
T Consensus 126 ~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~ 204 (480)
T PHA03100 126 YLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDN-GADINA 204 (480)
T ss_pred HHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHc-CCCccC
Confidence 555555555555555555555555555 55555555555555555555555555555555555555555544 555555
Q ss_pred CCCCC------CcHHHHHHHhCc--HHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCC
Q 009183 156 SDNEG------RSPLHWAAYKGF--ADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKA 227 (541)
Q Consensus 156 ~d~~g------~t~L~~A~~~~~--~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~ 227 (541)
.+..| .||||.|+..|+ .+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..
T Consensus 205 ~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga--d~n~~d~~ 282 (480)
T PHA03100 205 GDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGA--NPNLVNKY 282 (480)
T ss_pred CCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCccCCC
Confidence 55555 555555555555 555566665556555555556666666666666666666666555 44555555
Q ss_pred CCCHHHHHHhcCchHHHHHHHHhhh
Q 009183 228 GLTPTQLAYDKGHRQVALYLSNAQH 252 (541)
Q Consensus 228 g~t~l~~A~~~~~~~i~~~L~~~~~ 252 (541)
|.||+++|++.++.+++++|++.++
T Consensus 283 g~tpl~~A~~~~~~~iv~~Ll~~g~ 307 (480)
T PHA03100 283 GDTPLHIAILNNNKEIFKLLLNNGP 307 (480)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhcCC
Confidence 6666666666666666666555544
No 10
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=303.64 Aligned_cols=261 Identities=26% Similarity=0.308 Sum_probs=228.2
Q ss_pred CCceEEeecccc-CCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHh
Q 009183 3 SSEIEVVSSTEA-IPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIID 81 (541)
Q Consensus 3 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~ 81 (541)
+++++.++.+.+ .+......+..+.|||+.|++.|+.++++.|++. |++++..+..|.||||.|+..|+.+++++|++
T Consensus 11 ~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~-Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~ 89 (434)
T PHA02874 11 SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKH-GADINHINTKIPHPLLTAIKIGAHDIIKLLID 89 (434)
T ss_pred cCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 466677777664 3444556677889999999999999999998865 89999999999999999999999999999988
Q ss_pred CCC-----------------------CCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCC
Q 009183 82 HGG-----------------------DVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQ 138 (541)
Q Consensus 82 ~g~-----------------------~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~ 138 (541)
+|+ +++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 90 ~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~ 169 (434)
T PHA02874 90 NGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNF 169 (434)
T ss_pred CCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCc
Confidence 765 456678889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 009183 139 TSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTK 218 (541)
Q Consensus 139 ~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 218 (541)
.+++++|++. |.+++..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||.|+..+. +.+++|+ .|+
T Consensus 170 ~~iv~~Ll~~-g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~- 245 (434)
T PHA02874 170 FDIIKLLLEK-GAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNA- 245 (434)
T ss_pred HHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCC-
Confidence 9999999986 89999999999999999999999999999999999999999999999999999876 5666666 465
Q ss_pred CCCcccCCCCCCHHHHHHhcC-chHHHHHHHHhhhhcccccccccccccccCCCCchhHHHH
Q 009183 219 QELTAKDKAGLTPTQLAYDKG-HRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSI 279 (541)
Q Consensus 219 ~~~~~~d~~g~t~l~~A~~~~-~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~ 279 (541)
+++.+|..|.||||+|++.+ +.+++++|++.+.... .....|.+|+..+.
T Consensus 246 -~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n----------~~d~~g~TpL~~A~ 296 (434)
T PHA02874 246 -SINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADIS----------IKDNKGENPIDTAF 296 (434)
T ss_pred -CCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCC----------CCCCCCCCHHHHHH
Confidence 67889999999999999875 7899999998876543 12345788887765
No 11
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=309.41 Aligned_cols=258 Identities=25% Similarity=0.384 Sum_probs=236.8
Q ss_pred eeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHH-----HHHcCcHHHHHHHHhCC
Q 009183 9 VSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQW-----AALNNFADIAQYIIDHG 83 (541)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~-----A~~~~~~~iv~~Ll~~g 83 (541)
++.+.+.+......+..+.+|||.|++.|+.+.++.|++. |++++..+..|.||||+ |+..++.+++++|+++|
T Consensus 18 ~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~-g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~g 96 (480)
T PHA03100 18 IKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDN-GADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG 96 (480)
T ss_pred HHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHc-CCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCC
Confidence 3344444555566777899999999999999999999976 89999999999999999 99999999999999999
Q ss_pred CCCCCCCCCCchHHHHHH--HhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcC--CHHHHHHHHHhcCCCcccCCCC
Q 009183 84 GDVNATDNNGQTALHWAA--VRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYG--QTSFLNHIVAKYHADYDASDNE 159 (541)
Q Consensus 84 ~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g--~~~~v~~Ll~~~~~~~~~~d~~ 159 (541)
++++..+..|.||||+|+ ..|+.+++++|+++|++++.++..|.||||.|+..| +.+++++|++. |++++.+|..
T Consensus 97 a~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~-g~din~~d~~ 175 (480)
T PHA03100 97 ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK-GVDINAKNRY 175 (480)
T ss_pred CCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC-CCCcccccCC
Confidence 999999999999999999 999999999999999999999999999999999999 99999999987 9999999999
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCC------CcHHHHHHHcCC--HHHHHHHHHcCCCCCCcccCCCCCCH
Q 009183 160 GRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDG------CTPLHWAALRGN--VEACTVLVHAGTKQELTAKDKAGLTP 231 (541)
Q Consensus 160 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g------~tpLh~A~~~g~--~~~v~~Ll~~g~~~~~~~~d~~g~t~ 231 (541)
|.||||+|+..|+.+++++|+++|++++..+..| .||||.|+..|+ .+++++|+++|+ +++.+|..|.||
T Consensus 176 g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~--din~~d~~g~Tp 253 (480)
T PHA03100 176 GYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGV--PINIKDVYGFTP 253 (480)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCC--CCCCCCCCCCCH
Confidence 9999999999999999999999999999999998 999999999999 999999999998 778899999999
Q ss_pred HHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHHHH
Q 009183 232 TQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSII 280 (541)
Q Consensus 232 l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~i 280 (541)
||+|+..|+.+++++|++.++... .....|.+|+..++.
T Consensus 254 L~~A~~~~~~~iv~~Ll~~gad~n----------~~d~~g~tpl~~A~~ 292 (480)
T PHA03100 254 LHYAVYNNNPEFVKYLLDLGANPN----------LVNKYGDTPLHIAIL 292 (480)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCC----------ccCCCCCcHHHHHHH
Confidence 999999999999999999887443 234557888887764
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00 E-value=2.4e-35 Score=291.76 Aligned_cols=335 Identities=26% Similarity=0.281 Sum_probs=256.0
Q ss_pred CchHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccc-cCCChHHHHHHHcC
Q 009183 60 GYFALQWAALNNFADIAQYIIDH-GGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAAD-VHGYRAVHVAAQYG 137 (541)
Q Consensus 60 g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~t~l~~A~~~g 137 (541)
-.+.++.|++.|.++-|+.|++. |.+++..|.+|.|+|||||.+++.+++++|+++|+++|..+ .-+.||||+|+++|
T Consensus 44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G 123 (600)
T KOG0509|consen 44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG 123 (600)
T ss_pred hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence 34577899999999999999998 99999999999999999999999999999999999999998 77899999999999
Q ss_pred CHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 009183 138 QTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGT 217 (541)
Q Consensus 138 ~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~ 217 (541)
+..++..|++. |++++.+|.+|.+|+|.|++.|+.-.+-||+.+|++++.+|.+|+||||+|+.+|....++.|++-|+
T Consensus 124 ~~~vv~lLlqh-GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a 202 (600)
T KOG0509|consen 124 HISVVDLLLQH-GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA 202 (600)
T ss_pred cHHHHHHHHHc-CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc
Confidence 99999999976 99999999999999999999999999999999999999999999999999999999998999999998
Q ss_pred CCCCcccC-CCCCCHHHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHHHHHHHHHHHhceeec-cC
Q 009183 218 KQELTAKD-KAGLTPTQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSIIILCIILFINSVVA-AP 295 (541)
Q Consensus 218 ~~~~~~~d-~~g~t~l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~i~~~~~~f~~~~~~-~~ 295 (541)
.+..+| .+|.||||.|+..|+..++.+|++.+.... +....|.+|+..+--.-........... .+
T Consensus 203 --~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d----------~~~~~g~tp~~LA~~~~~~~~~~h~~~~~~~ 270 (600)
T KOG0509|consen 203 --SLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLD----------KTNTNGKTPFDLAQERKLVAALHHDVVERLG 270 (600)
T ss_pred --cccccccccCCchHHHHHhcCCcceEehhhhcCCccc----------ccccCCCCHHHHHHHhhhHHHhhccHHHhhc
Confidence 566677 899999999999999999996665544332 1222256666655322111100000000 00
Q ss_pred -cccchhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCCCCcCCcccccccccccc
Q 009183 296 -RLTKVTAVLGLWSWTVVSLAVGSLIMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNSPIWTGNWSQLCPTCKII 374 (541)
Q Consensus 296 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~ 374 (541)
.... ...+........+..+..++.++.-.||++--... . ..+ .+.-..+......|.+|.+.
T Consensus 271 ~~~~K----~~~~~~~~~~~~f~~~~~~~~~~~~~~g~i~~~~~-~---------w~i--~~~~L~~~~~~~~~~~~~~~ 334 (600)
T KOG0509|consen 271 KVVKK----WFLGSKLAALIFFIFLGLFYFISSWLPGVIFLINS-L---------WLI--KGLALGKLVLTCLCATRKIV 334 (600)
T ss_pred ccccc----hhhhhHHHHHHHHHHHHHHHHHHhhccchhhhhhh-H---------HHH--hhhhhhhhhhheeccchhhc
Confidence 0000 01112111112222455566677889998875321 0 000 00111122334789999999
Q ss_pred CCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHH
Q 009183 375 RPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYL 424 (541)
Q Consensus 375 kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~ 424 (541)
.+.+-.+|..|-.|+..|++||+|+. ||+-.|-..|.++.+...+..++
T Consensus 335 ~~~~~~~~~~~~~~~~~fw~~~~w~~-~i~~~~~~~~~~~~i~~~l~~~~ 383 (600)
T KOG0509|consen 335 GFLLRPPLLSGFFLSTLFWFYYFWFS-KITPYTLFDFHYCFIISVLAYFI 383 (600)
T ss_pred cccccchhHHHHHHHHHHHHHHhhhe-eccchhhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999 99999988776654443333333
No 13
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.5e-35 Score=305.35 Aligned_cols=263 Identities=25% Similarity=0.275 Sum_probs=233.9
Q ss_pred CceEEeeccccCCCCCCCCCCcchhhHHHHHHcC---CHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcC-cHHHHHHH
Q 009183 4 SEIEVVSSTEAIPNENQNDNQAAVTDVFSASAYG---DFEKLRKFVEEDGASVSRPDGNGYFALQWAALNN-FADIAQYI 79 (541)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g---~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~-~~~iv~~L 79 (541)
..+++++.+.+.+.+....+..|.||||.|+..| +.++++.|++. |+++|.+|..|.||||+|+..| +.+++++|
T Consensus 25 ~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~-Gadin~~~~~g~TpLh~A~~~~~~~~iv~lL 103 (471)
T PHA03095 25 VTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEA-GADVNAPERCGFTPLHLYLYNATTLDVIKLL 103 (471)
T ss_pred CCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHH
Confidence 4566778888888888888899999999999999 99999888865 9999999999999999999999 59999999
Q ss_pred HhCCCCCCCCCCCCchHHHHHH--HhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcC--CHHHHHHHHHhcCCCccc
Q 009183 80 IDHGGDVNATDNNGQTALHWAA--VRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYG--QTSFLNHIVAKYHADYDA 155 (541)
Q Consensus 80 l~~g~~~~~~~~~g~tpL~~A~--~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g--~~~~v~~Ll~~~~~~~~~ 155 (541)
+++|++++.++..|.||||+|+ ..++.+++++|+++|++++.+|..|.||||.|+..+ +.++++.|++. |.+++.
T Consensus 104 l~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~-g~~~~~ 182 (471)
T PHA03095 104 IKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDA-GADVYA 182 (471)
T ss_pred HHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCcc
Confidence 9999999999999999999999 556899999999999999999999999999998866 57899999976 888888
Q ss_pred CCCCCCcHHHHHHHh--CcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCCCcccCCCCCCH
Q 009183 156 SDNEGRSPLHWAAYK--GFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNV--EACTVLVHAGTKQELTAKDKAGLTP 231 (541)
Q Consensus 156 ~d~~g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~--~~v~~Ll~~g~~~~~~~~d~~g~t~ 231 (541)
.|..|.||||+|+.. ++.++++.|+++|++++.+|..|.||||+|+..|+. .+++.|++.|+ +++.+|..|.||
T Consensus 183 ~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~--din~~d~~g~Tp 260 (471)
T PHA03095 183 VDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI--SINARNRYGQTP 260 (471)
T ss_pred cCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCC--CCCCcCCCCCCH
Confidence 899999999999875 678999999999999999999999999999999875 57888999997 788899999999
Q ss_pred HHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHHHH
Q 009183 232 TQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSII 280 (541)
Q Consensus 232 l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~i 280 (541)
||+|+..|+.+++++|++.++... .....|.+|+..++.
T Consensus 261 Lh~A~~~~~~~~v~~LL~~gad~n----------~~~~~g~tpl~~A~~ 299 (471)
T PHA03095 261 LHYAAVFNNPRACRRLIALGADIN----------AVSSDGNTPLSLMVR 299 (471)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCc----------ccCCCCCCHHHHHHH
Confidence 999999999999999998876543 234457888887764
No 14
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=299.00 Aligned_cols=226 Identities=20% Similarity=0.304 Sum_probs=211.5
Q ss_pred chhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCC
Q 009183 26 AVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGS 105 (541)
Q Consensus 26 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~ 105 (541)
.+++|+.|++.|+.+.++.|++. |++++.++.+|.||||+|+..|+.+++++|+++|++++..+.++.||||.|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~-g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~ 80 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDI-GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGD 80 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCCC
Confidence 45789999999999999999975 99999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHhCCCCCC-ccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCC
Q 009183 106 IAVADVLVQNGARVE-AADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDA 184 (541)
Q Consensus 106 ~~~v~~Ll~~g~~~~-~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 184 (541)
.++++.|++.|++.+ ..+..|.||||+|+..|+.+++++|++. |++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus 81 ~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~-gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~ 159 (413)
T PHA02875 81 VKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA 159 (413)
T ss_pred HHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 999999999998764 4567899999999999999999999987 99999999999999999999999999999999999
Q ss_pred CCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCC-CCHHHHHHhcCchHHHHHHHHhhhhcc
Q 009183 185 SQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAG-LTPTQLAYDKGHRQVALYLSNAQHMHR 255 (541)
Q Consensus 185 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g-~t~l~~A~~~~~~~i~~~L~~~~~~~~ 255 (541)
+++.+|..|.||||+|+..|+.+++++|+++|+ +++..+..| .||+++|++.|+.+++++|++++....
T Consensus 160 ~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga--~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n 229 (413)
T PHA02875 160 CLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGA--NIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN 229 (413)
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC--CCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcc
Confidence 999999999999999999999999999999998 666777776 488999999999999999999887654
No 15
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1e-34 Score=299.52 Aligned_cols=245 Identities=22% Similarity=0.315 Sum_probs=222.6
Q ss_pred CCceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHh----------------------cCCCCccCCCCC
Q 009183 3 SSEIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEE----------------------DGASVSRPDGNG 60 (541)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~----------------------~~~~~~~~d~~g 60 (541)
+++.++++.|.+.+.+....+..+.+||+.|+..|+.++++.|++. .|++++.+|..|
T Consensus 45 ~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g 124 (434)
T PHA02874 45 SGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAEL 124 (434)
T ss_pred cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCC
Confidence 4677788888888888778888899999999999999999988864 345678889999
Q ss_pred chHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHH
Q 009183 61 YFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTS 140 (541)
Q Consensus 61 ~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~ 140 (541)
.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..|+.+
T Consensus 125 ~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~ 204 (434)
T PHA02874 125 KTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYA 204 (434)
T ss_pred ccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcC-CHHHHHHHHHcCCCC
Q 009183 141 FLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRG-NVEACTVLVHAGTKQ 219 (541)
Q Consensus 141 ~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~g~~~ 219 (541)
++++|++. +.+++.++..|.||||.|+..+. +.+++|+ .|++++.+|..|.||||+|+..+ +.+++++|+++|+
T Consensus 205 iv~~Ll~~-g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~ga-- 279 (434)
T PHA02874 205 CIKLLIDH-GNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKA-- 279 (434)
T ss_pred HHHHHHhC-CCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcC--
Confidence 99999976 89999999999999999998875 5666666 68999999999999999999875 8899999999998
Q ss_pred CCcccCCCCCCHHHHHHhcC-chHHHHHHHHhhh
Q 009183 220 ELTAKDKAGLTPTQLAYDKG-HRQVALYLSNAQH 252 (541)
Q Consensus 220 ~~~~~d~~g~t~l~~A~~~~-~~~i~~~L~~~~~ 252 (541)
+++.+|..|.||+++|++.+ +.++++.|.....
T Consensus 280 d~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~ 313 (434)
T PHA02874 280 DISIKDNKGENPIDTAFKYINKDPVIKDIIANAV 313 (434)
T ss_pred CCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcC
Confidence 78889999999999999987 6677888876554
No 16
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=298.52 Aligned_cols=243 Identities=18% Similarity=0.197 Sum_probs=207.0
Q ss_pred ceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcC--cHHHHHHHHhC
Q 009183 5 EIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNN--FADIAQYIIDH 82 (541)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~--~~~iv~~Ll~~ 82 (541)
+.++++.+.+.+.+.+..+..|.||||.|++.|+.++++.|++. |+++|.+|.+|.||||+|+..+ ..+++++|+++
T Consensus 51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~-GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~ 129 (446)
T PHA02946 51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTH-GADPNACDKQHKTPLYYLSGTDDEVIERINLLVQY 129 (446)
T ss_pred CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 34566777777777888888999999999999999999888874 8999999999999999998765 48899999999
Q ss_pred CCCCCC-CCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCC--HHHHHHHHHhcCCCcccCCCC
Q 009183 83 GGDVNA-TDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQ--TSFLNHIVAKYHADYDASDNE 159 (541)
Q Consensus 83 g~~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~--~~~v~~Ll~~~~~~~~~~d~~ 159 (541)
|++++. .+.+|.|||| |+..|+.++++.|++.|++++.+|..|.||||.|+..++ .+++++|++. |++++.+|.+
T Consensus 130 Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~d~~ 207 (446)
T PHA02946 130 GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKPDHD 207 (446)
T ss_pred CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCcccCCC
Confidence 999985 5788999997 666789999999999999999999999999999887554 5888888876 9999999999
Q ss_pred CCcHHHHHHHhC--cHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCC----------------
Q 009183 160 GRSPLHWAAYKG--FADTIRLLLFRDASQGRQDKDGCTPLHWAALRGN-VEACTVLVHAGTKQE---------------- 220 (541)
Q Consensus 160 g~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~g~~~~---------------- 220 (541)
|.||||+|+..+ +.+++++|+. |++++.+|..|.||||+|+..++ .++++.|+++|+..+
T Consensus 208 G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~ 286 (446)
T PHA02946 208 GNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVL 286 (446)
T ss_pred CCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHH
Confidence 999999999886 7889998885 89999999999999999999988 588999998876310
Q ss_pred --CcccC-CCCCCHHHHHHhcCchHHHHHHHHhh
Q 009183 221 --LTAKD-KAGLTPTQLAYDKGHRQVALYLSNAQ 251 (541)
Q Consensus 221 --~~~~d-~~g~t~l~~A~~~~~~~i~~~L~~~~ 251 (541)
+..++ ..|+||||+|+++|+.+++++|++++
T Consensus 287 e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~ 320 (446)
T PHA02946 287 EIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDND 320 (446)
T ss_pred HHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 11222 35779999999999999999999764
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=303.32 Aligned_cols=246 Identities=22% Similarity=0.265 Sum_probs=225.7
Q ss_pred ceEEeeccccCCCCCCCCCCcchhhHHHHHHcCC-HHHHHHHHHhcCCCCccCCCCCchHHHHHH--HcCcHHHHHHHHh
Q 009183 5 EIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGD-FEKLRKFVEEDGASVSRPDGNGYFALQWAA--LNNFADIAQYIID 81 (541)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~-~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~--~~~~~~iv~~Ll~ 81 (541)
..++++.+.+.+.+.+..+..|.||||.|+..|+ .++++.|++ .|++++.+|..|.||||+|+ ..++.+++++|++
T Consensus 62 ~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~-~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~ 140 (471)
T PHA03095 62 VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIK-AGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLR 140 (471)
T ss_pred hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHH
Confidence 6677788888888888888899999999999995 777777665 59999999999999999999 5568999999999
Q ss_pred CCCCCCCCCCCCchHHHHHHHhC--CHHHHHHHHhCCCCCCccccCCChHHHHHHHc--CCHHHHHHHHHhcCCCcccCC
Q 009183 82 HGGDVNATDNNGQTALHWAAVRG--SIAVADVLVQNGARVEAADVHGYRAVHVAAQY--GQTSFLNHIVAKYHADYDASD 157 (541)
Q Consensus 82 ~g~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~--g~~~~v~~Ll~~~~~~~~~~d 157 (541)
+|++++..+..|.||||+|+..+ +.+++++|+++|++++..|..|.||||+|+.. ++.++++.|++. |++++.+|
T Consensus 141 ~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~d 219 (471)
T PHA03095 141 KGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAATD 219 (471)
T ss_pred cCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCcccC
Confidence 99999999999999999998866 68999999999999999999999999999975 677889999876 99999999
Q ss_pred CCCCcHHHHHHHhCcH--HHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHH
Q 009183 158 NEGRSPLHWAAYKGFA--DTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLA 235 (541)
Q Consensus 158 ~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A 235 (541)
..|.||||+|+..|+. .+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||+++|
T Consensus 220 ~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~ga--d~n~~~~~g~tpl~~A 297 (471)
T PHA03095 220 MLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGA--DINAVSSDGNTPLSLM 297 (471)
T ss_pred CCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHH
Confidence 9999999999999874 68889999999999999999999999999999999999999998 7888999999999999
Q ss_pred HhcCchHHHHHHHHhhhhc
Q 009183 236 YDKGHRQVALYLSNAQHMH 254 (541)
Q Consensus 236 ~~~~~~~i~~~L~~~~~~~ 254 (541)
+++|+.++++.|++.++..
T Consensus 298 ~~~~~~~~v~~LL~~~~~~ 316 (471)
T PHA03095 298 VRNNNGRAVRAALAKNPSA 316 (471)
T ss_pred HHhCCHHHHHHHHHhCCCH
Confidence 9999999999999877544
No 18
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=6.9e-35 Score=306.81 Aligned_cols=245 Identities=18% Similarity=0.206 Sum_probs=166.1
Q ss_pred ceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCH--HHHHHHHHhcCCCCccCCCCCchHHHHH---------------
Q 009183 5 EIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDF--EKLRKFVEEDGASVSRPDGNGYFALQWA--------------- 67 (541)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~--~~v~~ll~~~~~~~~~~d~~g~t~Lh~A--------------- 67 (541)
+.++++.|.+.+.+.+..+..|.||||.|++.|+. ++++.|++ .|+++|.+|..|.||||.|
T Consensus 191 ~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe-~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiL 269 (764)
T PHA02716 191 DIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIE-LGGDMDMKCVNGMSPIMTYIINIDNINPEITNIY 269 (764)
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHH
Confidence 34566666666666666777777777777777743 66666664 3777777777777777754
Q ss_pred ----------------------HHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHH--hCCHHHHHHHHhCCCCCCccc
Q 009183 68 ----------------------ALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAV--RGSIAVADVLVQNGARVEAAD 123 (541)
Q Consensus 68 ----------------------~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~--~g~~~~v~~Ll~~g~~~~~~d 123 (541)
+..|+.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++.+|
T Consensus 270 ie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD 349 (764)
T PHA02716 270 IESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPD 349 (764)
T ss_pred HHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCC
Confidence 33466677777777777777777777777777653 346777777777777777777
Q ss_pred cCCChHHHHHHH--------------cCCHHHHHHHHHhcCCCcccCCCCCCcHHHHH----HHhCcHHHHHHHHhcCC-
Q 009183 124 VHGYRAVHVAAQ--------------YGQTSFLNHIVAKYHADYDASDNEGRSPLHWA----AYKGFADTIRLLLFRDA- 184 (541)
Q Consensus 124 ~~g~t~l~~A~~--------------~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A----~~~~~~~~v~~Ll~~g~- 184 (541)
..|.||||.|+. .++.+++++|++. |++++.+|..|.||||.+ ...+..+++++|++.|+
T Consensus 350 ~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~-GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~ 428 (764)
T PHA02716 350 NIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISL-GADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVL 428 (764)
T ss_pred CCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHC-CCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcch
Confidence 777777777654 2566777777765 777777777777777732 12345566666655432
Q ss_pred ------------------------------------------------------------CCCcccCCCCcHHHHHHHcC
Q 009183 185 ------------------------------------------------------------SQGRQDKDGCTPLHWAALRG 204 (541)
Q Consensus 185 ------------------------------------------------------------~~~~~d~~g~tpLh~A~~~g 204 (541)
+++.+|..|.||||+|+..|
T Consensus 429 ~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g 508 (764)
T PHA02716 429 NMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISH 508 (764)
T ss_pred hhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcC
Confidence 12334556778888887777
Q ss_pred CH-----HHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCch-----HHHHHHHHhhhh
Q 009183 205 NV-----EACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHR-----QVALYLSNAQHM 253 (541)
Q Consensus 205 ~~-----~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~-----~i~~~L~~~~~~ 253 (541)
+. +++++|++.|+ +++.+|++|+|||++|+++|+. ++++.|+++++.
T Consensus 509 ~~~~v~~e~~k~LL~~GA--DIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~ 565 (764)
T PHA02716 509 TNANIVMDSFVYLLSIQY--NINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPN 565 (764)
T ss_pred CccchhHHHHHHHHhCCC--CCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCC
Confidence 65 34477887777 5667777888888888877765 777777776654
No 19
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00 E-value=1.8e-34 Score=303.74 Aligned_cols=265 Identities=18% Similarity=0.184 Sum_probs=222.5
Q ss_pred CceEEeeccccCC-CCCCCC-CCcchhhHHHHHH--cCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCc--HHHHH
Q 009183 4 SEIEVVSSTEAIP-NENQND-NQAAVTDVFSASA--YGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNF--ADIAQ 77 (541)
Q Consensus 4 ~~~~~~~~l~~~~-~~~~~~-~~~~~~~L~~A~~--~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~--~~iv~ 77 (541)
.+.++++.|.+.+ .+.+.. +..|.+|||.|+. .++.++++.|++. |+++|.+|.+|.||||+|+..|+ .++|+
T Consensus 153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~-GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNN-GVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 5567777777776 565655 7889999998865 4678999888865 99999999999999999999995 59999
Q ss_pred HHHhCCCCCCCCCCCCchHHHHH-------------------------------------HHhCCHHHHHHHHhCCCCCC
Q 009183 78 YIIDHGGDVNATDNNGQTALHWA-------------------------------------AVRGSIAVADVLVQNGARVE 120 (541)
Q Consensus 78 ~Ll~~g~~~~~~~~~g~tpL~~A-------------------------------------~~~g~~~~v~~Ll~~g~~~~ 120 (541)
+|+++|++++.++..|.||||.| +..|+.++++.|+++|++++
T Consensus 232 lLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN 311 (764)
T PHA02716 232 KIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH 311 (764)
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee
Confidence 99999999999999999999975 44578899999999999999
Q ss_pred ccccCCChHHHHHHH--cCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHH--------------hCcHHHHHHHHhcCC
Q 009183 121 AADVHGYRAVHVAAQ--YGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAY--------------KGFADTIRLLLFRDA 184 (541)
Q Consensus 121 ~~d~~g~t~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~--------------~~~~~~v~~Ll~~g~ 184 (541)
.+|..|.||||+|+. .++.+++++|++. |++++.+|..|.||||+|+. .++.+++++|+++|+
T Consensus 312 ~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~-GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GA 390 (764)
T PHA02716 312 YKDSAGRTCLHQYILRHNISTDIIKLLHEY-GNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGA 390 (764)
T ss_pred ccCCCCCCHHHHHHHHhCCCchHHHHHHHc-CCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCC
Confidence 999999999999864 4678999999976 99999999999999999875 367899999999999
Q ss_pred CCCcccCCCCcHHHH----HHHcCCHHHHHHHHHcCCCC-----------------------------------------
Q 009183 185 SQGRQDKDGCTPLHW----AALRGNVEACTVLVHAGTKQ----------------------------------------- 219 (541)
Q Consensus 185 ~~~~~d~~g~tpLh~----A~~~g~~~~v~~Ll~~g~~~----------------------------------------- 219 (541)
+++.+|..|.||||. |...++.+++++|++.|+..
T Consensus 391 DIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~ 470 (764)
T PHA02716 391 DITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEP 470 (764)
T ss_pred CCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhh
Confidence 999999999999994 23357789999988865310
Q ss_pred ------------------CCcccCCCCCCHHHHHHhcCchHH-----HHHHHHhhhhcccccccccccccccCCCCchhH
Q 009183 220 ------------------ELTAKDKAGLTPTQLAYDKGHRQV-----ALYLSNAQHMHRNHWGDKICGRKTSDIGYAPIL 276 (541)
Q Consensus 220 ------------------~~~~~d~~g~t~l~~A~~~~~~~i-----~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~ 276 (541)
+.+.+|..|.||||+|+..|+.++ +++|++.+.... .....|.+|+.
T Consensus 471 ~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN----------~~d~~G~TPLh 540 (764)
T PHA02716 471 YDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNIN----------IPTKNGVTPLM 540 (764)
T ss_pred ccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCc----------ccCCCCCCHHH
Confidence 123457789999999999988754 599998877554 24567899999
Q ss_pred HHHH
Q 009183 277 FSII 280 (541)
Q Consensus 277 ~~~i 280 (541)
++..
T Consensus 541 ~A~~ 544 (764)
T PHA02716 541 LTMR 544 (764)
T ss_pred HHHH
Confidence 8885
No 20
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=300.68 Aligned_cols=210 Identities=22% Similarity=0.296 Sum_probs=130.2
Q ss_pred CCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHH---------------------
Q 009183 22 DNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYII--------------------- 80 (541)
Q Consensus 22 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll--------------------- 80 (541)
.+..+.+|||.||+.|+.+.++.|++. |+++|.+|.+|.||||+||..|+.++++.|+
T Consensus 33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~-gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~ 111 (477)
T PHA02878 33 ASLIPFIPLHQAVEARNLDVVKSLLTR-GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNN 111 (477)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHc
Confidence 455678999999999999999999975 8999999999999999999887665555444
Q ss_pred -------------------------------------------hCCCCCCCCCCC-CchHHHHHHHhCCHHHHHHHHhCC
Q 009183 81 -------------------------------------------DHGGDVNATDNN-GQTALHWAAVRGSIAVADVLVQNG 116 (541)
Q Consensus 81 -------------------------------------------~~g~~~~~~~~~-g~tpL~~A~~~g~~~~v~~Ll~~g 116 (541)
++|++++..+.. |.||||+|+..|+.+++++|+++|
T Consensus 112 ~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~g 191 (477)
T PHA02878 112 RNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYG 191 (477)
T ss_pred CCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCC
Confidence 445555555544 555555555555555555555555
Q ss_pred CCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHh-CcHHHHHHHHhcCCCCCcccC-CCC
Q 009183 117 ARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYK-GFADTIRLLLFRDASQGRQDK-DGC 194 (541)
Q Consensus 117 ~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~d~-~g~ 194 (541)
++++.+|..|.||||.|+..|+.++++.|++. |++++.+|..|.||||+|+.. ++.+++++|+++|++++.++. .|.
T Consensus 192 ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~-ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~ 270 (477)
T PHA02878 192 ANVNIPDKTNNSPLHHAVKHYNKPIVHILLEN-GASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGL 270 (477)
T ss_pred CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence 55555555555555555555555555555543 555555555555555555543 345555555555555555443 355
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q 009183 195 TPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYD 237 (541)
Q Consensus 195 tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~ 237 (541)
||||+| .++.+++++|+++|+ +++.+|..|.|||++|++
T Consensus 271 TpLh~A--~~~~~~v~~Ll~~ga--din~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 271 TALHSS--IKSERKLKLLLEYGA--DINSLNSYKLTPLSSAVK 309 (477)
T ss_pred CHHHHH--ccCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHH
Confidence 555555 234455555555554 444455555555555554
No 21
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-35 Score=247.81 Aligned_cols=189 Identities=31% Similarity=0.478 Sum_probs=176.7
Q ss_pred cccCCC-CCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhC-CCCCCCC
Q 009183 12 TEAIPN-ENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDH-GGDVNAT 89 (541)
Q Consensus 12 l~~~~~-~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~ 89 (541)
..+.++ .+-..++++.+|||.|+..|+.+++..|+++.+..+|.+|..|+||||.||..|+.++|+.|+.+ |+++|..
T Consensus 23 ~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~ 102 (226)
T KOG4412|consen 23 IQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNAT 102 (226)
T ss_pred HhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCccee
Confidence 344553 34445669999999999999999999999988899999999999999999999999999999988 9999999
Q ss_pred CCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHH
Q 009183 90 DNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAY 169 (541)
Q Consensus 90 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~ 169 (541)
+..|.|+||+|+..|..+++++|+++|+.++.+|..|.||||-|+.-|+.+++++|+.. ++.+|.+|..|.||||.|..
T Consensus 103 tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~-~a~~n~qDk~G~TpL~~al~ 181 (226)
T KOG4412|consen 103 TNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ-GAPLNTQDKYGFTPLHHALA 181 (226)
T ss_pred cCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhc-CCCCCcccccCccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999987 89999999999999999988
Q ss_pred hCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHH
Q 009183 170 KGFADTIRLLLFRDASQGRQDKDGCTPLHWAAL 202 (541)
Q Consensus 170 ~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~ 202 (541)
.|+.++..+|+++|++.+..|++| ||+..|+.
T Consensus 182 e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~ 213 (226)
T KOG4412|consen 182 EGHPDVAVLLVRAGADTDREDKEG-TALRIACN 213 (226)
T ss_pred ccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence 999999999999999999999998 99887764
No 22
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=271.25 Aligned_cols=210 Identities=18% Similarity=0.143 Sum_probs=188.6
Q ss_pred cCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhC
Q 009183 36 YGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQN 115 (541)
Q Consensus 36 ~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 115 (541)
.++.+.++.|++ .+. +.+|.+|.||||+|+..|+.+++++|+++|++++..+ +.||||+|+..|+.++++.|++.
T Consensus 9 ~~~~~~~~~Lis-~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 9 WKSKQLKSFLSS-KDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred cCHHHHHHHHHh-CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHC
Confidence 356677766665 455 5679999999999999999999999999999988764 68999999999999999999999
Q ss_pred CCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCC-CcHHHHHHHhCcHHHHHHHHhcCCCCCccc-CCC
Q 009183 116 GARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEG-RSPLHWAAYKGFADTIRLLLFRDASQGRQD-KDG 193 (541)
Q Consensus 116 g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g-~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g 193 (541)
|++++.+|..|.||||+|+..|+.++++.|++. +++++.++..| .||||+|+..|+.+++++|++++.+. .| ..|
T Consensus 84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~-gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g 160 (284)
T PHA02791 84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAIL 160 (284)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccC
Confidence 999999999999999999999999999999976 89999999888 48999999999999999999987543 23 248
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCH-HHHHHhcCchHHHHHHHHhhhhcc
Q 009183 194 CTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTP-TQLAYDKGHRQVALYLSNAQHMHR 255 (541)
Q Consensus 194 ~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~-l~~A~~~~~~~i~~~L~~~~~~~~ 255 (541)
.||||+|+..|+.+++++|+++|+ +++.+|..|.|| |++|++.|+.+++++|++++....
T Consensus 161 ~TpLh~Aa~~g~~eiv~lLL~~gA--d~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in 221 (284)
T PHA02791 161 LSCIHITIKNGHVDMMILLLDYMT--STNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIY 221 (284)
T ss_pred ccHHHHHHHcCCHHHHHHHHHCCC--CCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCc
Confidence 999999999999999999999998 677889999987 999999999999999999887653
No 23
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=2.1e-34 Score=290.01 Aligned_cols=268 Identities=24% Similarity=0.350 Sum_probs=241.0
Q ss_pred ceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCC
Q 009183 5 EIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGG 84 (541)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~ 84 (541)
..+.++.+.+.+.+..-.+..+.+|+|.|+.+|+.+.++.|++. ++|+|..|+.|.||||.||..++.|..+.|++.|+
T Consensus 100 ~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~-~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a 178 (929)
T KOG0510|consen 100 QGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDY-GADVNLEDENGFTPLHLAARKNKVEAKKELINKGA 178 (929)
T ss_pred hHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHh-cCCccccccCCCchhhHHHhcChHHHHHHHHhcCC
Confidence 44667788888889899999999999999999999999988876 69999999999999999999999998899999999
Q ss_pred CCCCCCCCCchHHHHHHHhCCHHHHHHHHh-----CCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCC--------
Q 009183 85 DVNATDNNGQTALHWAAVRGSIAVADVLVQ-----NGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHA-------- 151 (541)
Q Consensus 85 ~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-----~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~-------- 151 (541)
++-..|.+|.+|+|.|+++|..++++..+. ++..++.-+.+|.+|||.|++.|+.++++..++....
T Consensus 179 ~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~ 258 (929)
T KOG0510|consen 179 DPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDA 258 (929)
T ss_pred CCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHH
Confidence 999999999999999999999999999998 7788999999999999999999999999999875221
Q ss_pred ------CcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCccc
Q 009183 152 ------DYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVH-AGTKQELTAK 224 (541)
Q Consensus 152 ------~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~ 224 (541)
-++..|.+|.||||+||++|+.++++.|+..|++++.++.++.||||.||+.|+.++|+.|++ .|. ..++..
T Consensus 259 ~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~-rllne~ 337 (929)
T KOG0510|consen 259 MQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDT-RLLNES 337 (929)
T ss_pred HHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCc-cccccc
Confidence 144568999999999999999999999999999999999999999999999999999999999 443 688899
Q ss_pred CCCCCCHHHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHHHHH
Q 009183 225 DKAGLTPTQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSIII 281 (541)
Q Consensus 225 d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~i~ 281 (541)
|..|.||||+|++.||..+++.|++.++...+.- ..++.|.++++++...
T Consensus 338 D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~-------e~D~dg~TaLH~Aa~~ 387 (929)
T KOG0510|consen 338 DLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMS-------EADSDGNTALHLAAKY 387 (929)
T ss_pred cccCCCchhhhhhcCHHHHHHHHHhcChhhhccc-------ccccCCchhhhHHHHh
Confidence 9999999999999999999999999988655310 2366788888887753
No 24
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]
Probab=100.00 E-value=1.2e-34 Score=276.93 Aligned_cols=200 Identities=28% Similarity=0.443 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCCCCcCCccccccccccccCCCCCcCCccchhhh
Q 009183 310 TVVSLAVGSLIMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNSPIWTGNWSQLCPTCKIIRPVRSKHCPACKCCV 389 (541)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV 389 (541)
.+++...+..+.+++...+|||+.+++....+.++..++....... ...++|.+|+.+||+|||||+.|||||
T Consensus 61 ~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~C~~C~~~KP~RS~HC~~Cn~CV 133 (309)
T COG5273 61 LFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKF-------GTENFCSTCNIYKPPRSHHCSICNRCV 133 (309)
T ss_pred hhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCcc-------ccceeccccccccCCCCccchhhcchh
Confidence 3444455677888999999999998765443333333333333222 235899999999999999999999999
Q ss_pred hccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchhhhhcchhHHHH--HHHHHHHHH
Q 009183 390 EQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPHLPADGTWIHYVLVHPGLVLF--LVLDTIILI 467 (541)
Q Consensus 390 ~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 467 (541)
+||||||||+|||||.+|||+|++|+++.....++.+....+.+......+.+.... ...+++ ..+.+.+++
T Consensus 134 ~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~li~~~~~~~~~~f~ 207 (309)
T COG5273 134 LKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHDTSLA------ICFLIFGCSLLGVVFFI 207 (309)
T ss_pred hccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHH------HHHHHHhhhHHHHHHHH
Confidence 999999999999999999999999999998887777766666554443222111100 111222 234444566
Q ss_pred HHHHHHHHHHHHhhccchhHHhhhhcccccc-------cCCC---------CCcCCCCChhHHhHHHHHhc
Q 009183 468 AGTTLTSIQAYQIARNITTNELANSVRYDYL-------RGPD---------GRFRNPYNHGCQKNCADFFI 522 (541)
Q Consensus 468 ~~~~l~~~~~~~i~~n~Tt~E~~~~~~~~~~-------~~~~---------~~~~n~f~~g~~~N~~~~~~ 522 (541)
.+..++.++.+.+..|+||+|.....|.... +..+ .+...|++.|.-+|+..+++
T Consensus 208 ~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~i~~ 278 (309)
T COG5273 208 ITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRESNLPFTNIFDSSEGALPLDLGIGQNLSTIKG 278 (309)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccCCcCceeccCCCccccccccCccccceeecC
Confidence 6777888999999999999998876554321 1110 11335677777777777764
No 25
>PHA02946 ankyin-like protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=286.71 Aligned_cols=221 Identities=23% Similarity=0.295 Sum_probs=198.4
Q ss_pred chhhHHHHH--HcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHh
Q 009183 26 AVTDVFSAS--AYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVR 103 (541)
Q Consensus 26 ~~~~L~~A~--~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 103 (541)
..++||.++ ..++.++++.|++. |+++|.+|.+|.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|+..
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~ 115 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHR-GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGT 115 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHC-cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 357788765 44577888888865 999999999999999999999999999999999999999999999999999886
Q ss_pred C--CHHHHHHHHhCCCCCCc-cccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCc--HHHHHH
Q 009183 104 G--SIAVADVLVQNGARVEA-ADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGF--ADTIRL 178 (541)
Q Consensus 104 g--~~~~v~~Ll~~g~~~~~-~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~--~~~v~~ 178 (541)
+ ..+++++|+++|++++. .|..|.|||| |+..++.++++.|++. |++++.+|..|.||||.|+..++ .+++++
T Consensus 116 ~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~-gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~ 193 (446)
T PHA02946 116 DDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSI-GFEARIVDKFGKNHIHRHLMSDNPKASTISW 193 (446)
T ss_pred CCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhc-cccccccCCCCCCHHHHHHHhcCCCHHHHHH
Confidence 6 48999999999999995 6899999997 6677999999999976 99999999999999999987654 689999
Q ss_pred HHhcCCCCCcccCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCc-hHHHHHHHHhhh
Q 009183 179 LLFRDASQGRQDKDGCTPLHWAALRG--NVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGH-RQVALYLSNAQH 252 (541)
Q Consensus 179 Ll~~g~~~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~-~~i~~~L~~~~~ 252 (541)
|+++|++++.+|.+|.||||+|+..+ +.+++++|++ |+ +++.+|..|.|||++|++.++ .+++++|++.+.
T Consensus 194 Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga--din~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~ 267 (446)
T PHA02946 194 MMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-ST--DVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSN 267 (446)
T ss_pred HHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC--CCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCC
Confidence 99999999999999999999999986 8899999985 76 788999999999999999988 488999988764
No 26
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=304.28 Aligned_cols=264 Identities=22% Similarity=0.234 Sum_probs=166.2
Q ss_pred CCceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHH--------
Q 009183 3 SSEIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFAD-------- 74 (541)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~-------- 74 (541)
.++.++.+.|.+.+.+.+..+..|.||||.||+.|+.++++.|++. |++++..+.+|.||||.|+..++.+
T Consensus 155 ~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~-Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~ 233 (682)
T PHA02876 155 QDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSY-GADVNIIALDDLSVLECAVDSKNIDTIKAIIDN 233 (682)
T ss_pred CCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 3566677788888888888888999999999999999999988875 6666655555555555555444444
Q ss_pred -------------------------------------------------------HHHHHHhCCCCCCCCCCCCchHHHH
Q 009183 75 -------------------------------------------------------IAQYIIDHGGDVNATDNNGQTALHW 99 (541)
Q Consensus 75 -------------------------------------------------------iv~~Ll~~g~~~~~~~~~g~tpL~~ 99 (541)
++++|+++|++++.++.+|.||||+
T Consensus 234 ~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~ 313 (682)
T PHA02876 234 RSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYL 313 (682)
T ss_pred CCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 4444444555555555555555555
Q ss_pred HHHhC-CHHHHHHHHhCCCCCCccccCCChHHHHHHHcC-CHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHH
Q 009183 100 AAVRG-SIAVADVLVQNGARVEAADVHGYRAVHVAAQYG-QTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIR 177 (541)
Q Consensus 100 A~~~g-~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g-~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 177 (541)
|+..| +.++++.|++.|++++.+|..|.||||+|+..+ +.+++..|++. |++++.+|..|.||||+|+..|+.++++
T Consensus 314 Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~-gadin~~d~~G~TpLh~Aa~~~~~~iv~ 392 (682)
T PHA02876 314 MAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLEL-GANVNARDYCDKTPIHYAAVRNNVVIIN 392 (682)
T ss_pred HHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHc-CCCCccCCCCCCCHHHHHHHcCCHHHHH
Confidence 55544 345555555555555555555555555555432 33444444433 6666666666666666666666666666
Q ss_pred HHHhcCCCCCcccCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC-chHHHHHHHHhhhhcc
Q 009183 178 LLLFRDASQGRQDKDGCTPLHWAALRGN-VEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKG-HRQVALYLSNAQHMHR 255 (541)
Q Consensus 178 ~Ll~~g~~~~~~d~~g~tpLh~A~~~g~-~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~-~~~i~~~L~~~~~~~~ 255 (541)
+|+++|++++..+..|.||||+|+..++ ..+++.|+++|+ +++.+|..|.||||+|++.+ +.+++++|++.+....
T Consensus 393 ~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~ga--din~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n 470 (682)
T PHA02876 393 TLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGA--NVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVN 470 (682)
T ss_pred HHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCC--CCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCC
Confidence 6666666666666666666666665444 345666666665 56677888888888888765 5688888877765443
Q ss_pred cccccccccccccCCCCchhHHHHH
Q 009183 256 NHWGDKICGRKTSDIGYAPILFSII 280 (541)
Q Consensus 256 ~~~~~~~~~~~~~~lg~~~l~~~~i 280 (541)
.....|.+|+..+..
T Consensus 471 ----------~~d~~g~tpl~~a~~ 485 (682)
T PHA02876 471 ----------AINIQNQYPLLIALE 485 (682)
T ss_pred ----------CCCCCCCCHHHHHHH
Confidence 123446677776653
No 27
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00 E-value=9.9e-33 Score=283.47 Aligned_cols=244 Identities=17% Similarity=0.200 Sum_probs=216.7
Q ss_pred CCceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhC
Q 009183 3 SSEIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDH 82 (541)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 82 (541)
.++.++++.+.+.+.+.+..+..|.||||.|+..|+.++++.|++. |++++..+.++.||||.|+..|+.++++.|+++
T Consensus 12 ~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~ 90 (413)
T PHA02875 12 FGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKH-GAIPDVKYPDIESELHDAVEEGDVKAVEELLDL 90 (413)
T ss_pred hCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccCCCcccHHHHHHHCCCHHHHHHHHHc
Confidence 4677888888888777777888899999999999999999888875 888999899999999999999999999999999
Q ss_pred CCCCCC-CCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCC
Q 009183 83 GGDVNA-TDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGR 161 (541)
Q Consensus 83 g~~~~~-~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 161 (541)
|++.+. .+.+|.||||+|+..|+.+++++|+++|++++.++..|.||||.|+..|+.+++++|++. +++++.+|..|.
T Consensus 91 ~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~ 169 (413)
T PHA02875 91 GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCGC 169 (413)
T ss_pred CCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCC
Confidence 987653 466799999999999999999999999999999999999999999999999999999976 999999999999
Q ss_pred cHHHHHHHhCcHHHHHHHHhcCCCCCcccCCC-CcHHHHHHHcCCHHHHHHHHHcCCCCCCc-ccCCCCCCHHHHHHhc-
Q 009183 162 SPLHWAAYKGFADTIRLLLFRDASQGRQDKDG-CTPLHWAALRGNVEACTVLVHAGTKQELT-AKDKAGLTPTQLAYDK- 238 (541)
Q Consensus 162 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g-~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~-~~d~~g~t~l~~A~~~- 238 (541)
||||+|+..|+.+++++|+++|++++..+..| .||+|+|+..|+.+++++|+++|++.++. ..+.++.||++.+...
T Consensus 170 TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~ 249 (413)
T PHA02875 170 TPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMC 249 (413)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhc
Confidence 99999999999999999999999999999886 58999999999999999999999965432 3467899999987643
Q ss_pred --CchHHHHHHH
Q 009183 239 --GHRQVALYLS 248 (541)
Q Consensus 239 --~~~~i~~~L~ 248 (541)
...+.++.+.
T Consensus 250 ~~~~~~~~~~li 261 (413)
T PHA02875 250 TNLESEAIDALI 261 (413)
T ss_pred CCcccHHHHHHH
Confidence 2334444443
No 28
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00 E-value=6.4e-33 Score=289.98 Aligned_cols=213 Identities=20% Similarity=0.298 Sum_probs=133.8
Q ss_pred CHHHHHHHHHhcCCCCccCCCCCchHHHHHHHc-----CcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhC---CHHHH
Q 009183 38 DFEKLRKFVEEDGASVSRPDGNGYFALQWAALN-----NFADIAQYIIDHGGDVNATDNNGQTALHWAAVRG---SIAVA 109 (541)
Q Consensus 38 ~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~-----~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g---~~~~v 109 (541)
+.++++.|++. |+++|.+|..|.||||.|+.+ ++.+++++|+++|+++|.++.+|.||||+|+..+ +.+++
T Consensus 50 ~~~iv~~Ll~~-Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv 128 (489)
T PHA02798 50 STDIVKLFINL-GANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEIL 128 (489)
T ss_pred CHHHHHHHHHC-CCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHH
Confidence 44555444432 555555555555555554432 3445555555555555555555555555555443 34555
Q ss_pred HHHHhCCCCCCccccCCChHHHHHHHcCC---HHHHHHHHHhcCCCcccCC-CCCCcHHHHHHHhC----cHHHHHHHHh
Q 009183 110 DVLVQNGARVEAADVHGYRAVHVAAQYGQ---TSFLNHIVAKYHADYDASD-NEGRSPLHWAAYKG----FADTIRLLLF 181 (541)
Q Consensus 110 ~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~---~~~v~~Ll~~~~~~~~~~d-~~g~t~L~~A~~~~----~~~~v~~Ll~ 181 (541)
++|+++|++++.+|..|.||||+|++.++ .++++.|+++ |++++..+ ..|.||||.++..+ +.+++++|++
T Consensus 129 ~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~-gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~ 207 (489)
T PHA02798 129 LFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK-GVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVD 207 (489)
T ss_pred HHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh-CCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHH
Confidence 55555555555555555555555555444 4555555544 45554442 23445555444322 3444444444
Q ss_pred cC---------------------------------------CCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc
Q 009183 182 RD---------------------------------------ASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELT 222 (541)
Q Consensus 182 ~g---------------------------------------~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~ 222 (541)
+| +++|.+|..|.||||+|+..|+.+++++|+++|+ +++
T Consensus 208 ~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GA--din 285 (489)
T PHA02798 208 NGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGG--DIN 285 (489)
T ss_pred CCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCC--ccc
Confidence 43 5667788889999999999999999999999998 788
Q ss_pred ccCCCCCCHHHHHHhcCchHHHHHHHHhhhhc
Q 009183 223 AKDKAGLTPTQLAYDKGHRQVALYLSNAQHMH 254 (541)
Q Consensus 223 ~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~ 254 (541)
.+|..|+|||+.|+++++.++++.|++.++..
T Consensus 286 ~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~ 317 (489)
T PHA02798 286 IITELGNTCLFTAFENESKFIFNSILNKKPNK 317 (489)
T ss_pred ccCCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence 89999999999999999999999998876544
No 29
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=288.08 Aligned_cols=242 Identities=15% Similarity=0.195 Sum_probs=173.0
Q ss_pred ceEEeeccccCCCCCCCCCCcchhhHHHHHHc--CCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcC------cHHHH
Q 009183 5 EIEVVSSTEAIPNENQNDNQAAVTDVFSASAY--GDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNN------FADIA 76 (541)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~------~~~iv 76 (541)
.+++++.|.+.+.+.+.. ..|.++|+.++.. ++.++++.|++. |+++|.++ .+.||||.|+.++ +.+++
T Consensus 15 ~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~-GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv 91 (494)
T PHA02989 15 DKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDN-GADVNYKG-YIETPLCAVLRNREITSNKIKKIV 91 (494)
T ss_pred cHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHc-CCCccCCC-CCCCcHHHHHhccCcchhhHHHHH
Confidence 445556666555555544 4466666554433 246666666653 77777665 4567777766543 45677
Q ss_pred HHHHhCCCCCCCCCCCCchHHHHHHHh---CCHHHHHHHHhCCCCC-CccccCCChHHHHHHHc--CCHHHHHHHHHhcC
Q 009183 77 QYIIDHGGDVNATDNNGQTALHWAAVR---GSIAVADVLVQNGARV-EAADVHGYRAVHVAAQY--GQTSFLNHIVAKYH 150 (541)
Q Consensus 77 ~~Ll~~g~~~~~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~g~~~-~~~d~~g~t~l~~A~~~--g~~~~v~~Ll~~~~ 150 (541)
++|+++|++++.++..|.||||.|+.. |+.+++++|+++|+|+ +.+|..|.||||+|+.. ++.++++.|++. |
T Consensus 92 ~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-G 170 (494)
T PHA02989 92 KLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-G 170 (494)
T ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc-C
Confidence 777777777777777777777766544 4677777777777777 66777777777776543 466777777765 6
Q ss_pred CCccc-CCCCCCcHHHHHHHhC----cHHHHHHHHhcCCCC--------------------------------------C
Q 009183 151 ADYDA-SDNEGRSPLHWAAYKG----FADTIRLLLFRDASQ--------------------------------------G 187 (541)
Q Consensus 151 ~~~~~-~d~~g~t~L~~A~~~~----~~~~v~~Ll~~g~~~--------------------------------------~ 187 (541)
++++. .+..|.||||.|+..+ +.+++++|+++|+++ +
T Consensus 171 adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn 250 (494)
T PHA02989 171 VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKIN 250 (494)
T ss_pred CCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCC
Confidence 77666 4666777777766543 667777777666654 4
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhh
Q 009183 188 RQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQH 252 (541)
Q Consensus 188 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~ 252 (541)
.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..|.|||++|+++|+.++++.|++.++
T Consensus 251 ~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Ga--din~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 251 KKDKKGFNPLLISAKVDNYEAFNYLLKLGD--DIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred CCCCCCCCHHHHHHHhcCHHHHHHHHHcCC--CccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 456669999999999999999999999998 778899999999999999999999999987653
No 30
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00 E-value=7.1e-32 Score=293.71 Aligned_cols=239 Identities=23% Similarity=0.225 Sum_probs=214.5
Q ss_pred eccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcC-cHHHHHHHHhCCCCCCC
Q 009183 10 SSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNN-FADIAQYIIDHGGDVNA 88 (541)
Q Consensus 10 ~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~-~~~iv~~Ll~~g~~~~~ 88 (541)
+.+.+.+.+....+..|.||||.|+..|+.+.+..++.+.|++++.+|.+|.||||+|+..| +.++++.|++.|++++.
T Consensus 257 ~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~ 336 (682)
T PHA02876 257 LLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNA 336 (682)
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCC
Confidence 33444445556667789999999999999876666666779999999999999999999999 69999999999999999
Q ss_pred CCCCCchHHHHHHHh-CCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHH
Q 009183 89 TDNNGQTALHWAAVR-GSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWA 167 (541)
Q Consensus 89 ~~~~g~tpL~~A~~~-g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A 167 (541)
.+..|.||||+|+.. ++.++++.|++.|++++.+|..|.||||+|+..|+.++++.|++. |++++..+..|.||||+|
T Consensus 337 ~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~-gad~~~~~~~g~T~Lh~A 415 (682)
T PHA02876 337 ADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDY-GADIEALSQKIGTALHFA 415 (682)
T ss_pred cccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCccccCCCCCchHHHH
Confidence 999999999999985 579999999999999999999999999999999999999999976 999999999999999999
Q ss_pred HHhCc-HHHHHHHHhcCCCCCcccCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHH
Q 009183 168 AYKGF-ADTIRLLLFRDASQGRQDKDGCTPLHWAALRG-NVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVAL 245 (541)
Q Consensus 168 ~~~~~-~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g-~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~ 245 (541)
+..+. ..++++|+++|++++.+|..|+||||+|+..| +.+++++|+++|+ +++.+|..|.||+++|++.+ ++++
T Consensus 416 ~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Ga--d~n~~d~~g~tpl~~a~~~~--~~v~ 491 (682)
T PHA02876 416 LCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGA--DVNAINIQNQYPLLIALEYH--GIVN 491 (682)
T ss_pred HHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHhC--CHHH
Confidence 98766 57799999999999999999999999999976 6899999999998 78889999999999999865 5788
Q ss_pred HHHHhhhh
Q 009183 246 YLSNAQHM 253 (541)
Q Consensus 246 ~L~~~~~~ 253 (541)
.|+..+..
T Consensus 492 ~Ll~~~a~ 499 (682)
T PHA02876 492 ILLHYGAE 499 (682)
T ss_pred HHHHCCCC
Confidence 88876653
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00 E-value=3.4e-31 Score=276.48 Aligned_cols=237 Identities=21% Similarity=0.276 Sum_probs=193.5
Q ss_pred hHHHHHHcCCHHHHHHHHHhc---CCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCC
Q 009183 29 DVFSASAYGDFEKLRKFVEED---GASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGS 105 (541)
Q Consensus 29 ~L~~A~~~g~~~~v~~ll~~~---~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~ 105 (541)
.|+.++...+.+.+.+.++.. +...+.....+.||||+|+..|+.++|++|+++|++++.++.+|.||||+||..|+
T Consensus 3 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~ 82 (477)
T PHA02878 3 KLYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPN 82 (477)
T ss_pred hHHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCcc
Confidence 367778888877777777652 22223345578899999999999999999999999999999999999999998765
Q ss_pred HH----------------------------------------------------------------HHHHHHhCCCCCCc
Q 009183 106 IA----------------------------------------------------------------VADVLVQNGARVEA 121 (541)
Q Consensus 106 ~~----------------------------------------------------------------~v~~Ll~~g~~~~~ 121 (541)
.+ ++++|+++|++++.
T Consensus 83 ~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~ 162 (477)
T PHA02878 83 KLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINM 162 (477)
T ss_pred HhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCc
Confidence 42 66677777888888
Q ss_pred cccC-CChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHH
Q 009183 122 ADVH-GYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWA 200 (541)
Q Consensus 122 ~d~~-g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A 200 (541)
+|.. |.||||+|+..|+.+++++|++. |++++..|..|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 163 ~~~~~g~tpLh~A~~~~~~~iv~~Ll~~-gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A 241 (477)
T PHA02878 163 KDRHKGNTALHYATENKDQRLTELLLSY-GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHIS 241 (477)
T ss_pred cCCCCCCCHHHHHHhCCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 8888 89999999999999999988876 888888899999999999999999999999999999999999999999999
Q ss_pred HHc-CCHHHHHHHHHcCCCCCCcccCC-CCCCHHHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHH
Q 009183 201 ALR-GNVEACTVLVHAGTKQELTAKDK-AGLTPTQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFS 278 (541)
Q Consensus 201 ~~~-g~~~~v~~Ll~~g~~~~~~~~d~-~g~t~l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~ 278 (541)
+.. ++.+++++|+++|+ +++.++. .|.||||+| .++.+++++|++.++... .....|.+|+..+
T Consensus 242 ~~~~~~~~iv~~Ll~~ga--dvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin----------~~d~~g~TpL~~A 307 (477)
T PHA02878 242 VGYCKDYDILKLLLEHGV--DVNAKSYILGLTALHSS--IKSERKLKLLLEYGADIN----------SLNSYKLTPLSSA 307 (477)
T ss_pred HHhcCCHHHHHHHHHcCC--CCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCC----------CcCCCCCCHHHHH
Confidence 875 68899999999988 5666665 789999998 467788888888776543 2344577887776
Q ss_pred HH
Q 009183 279 II 280 (541)
Q Consensus 279 ~i 280 (541)
+.
T Consensus 308 ~~ 309 (477)
T PHA02878 308 VK 309 (477)
T ss_pred HH
Confidence 53
No 32
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00 E-value=4.4e-32 Score=273.39 Aligned_cols=247 Identities=23% Similarity=0.315 Sum_probs=219.6
Q ss_pred eEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHh----
Q 009183 6 IEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIID---- 81 (541)
Q Consensus 6 ~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~---- 81 (541)
.+.++-+.+...+.+..++.+.||||.||..++.| .+++|.+.++++...|.+|++|+|.|+++|..++.+..+.
T Consensus 134 ~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E-~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~ 212 (929)
T KOG0510|consen 134 YSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVE-AKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGY 212 (929)
T ss_pred HHHHHHHHHhcCCccccccCCCchhhHHHhcChHH-HHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccc
Confidence 34455666777888889999999999999999999 6666666799999999999999999999999999999997
Q ss_pred -CCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCC---------------CccccCCChHHHHHHHcCCHHHHHHH
Q 009183 82 -HGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARV---------------EAADVHGYRAVHVAAQYGQTSFLNHI 145 (541)
Q Consensus 82 -~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~---------------~~~d~~g~t~l~~A~~~g~~~~v~~L 145 (541)
++..+|.-+..+.||||.|+..|++++++.++++|+.. +..|+.|.||||+|++.|+.+.+..|
T Consensus 213 ~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~L 292 (929)
T KOG0510|consen 213 ERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNL 292 (929)
T ss_pred hhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHH
Confidence 56778888999999999999999999999999987543 34588999999999999999999999
Q ss_pred HHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHh-cC-CCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-Cc
Q 009183 146 VAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLF-RD-ASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQE-LT 222 (541)
Q Consensus 146 l~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~g-~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~-~~ 222 (541)
+.. |++++.++.++.||||.||..|+.+.++-|++ .| ...|..|..|+||||.|+.+|+.++++.|++.|+... ..
T Consensus 293 l~~-Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~ 371 (929)
T KOG0510|consen 293 LGF-GASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMS 371 (929)
T ss_pred HHc-CCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhccc
Confidence 976 99999999999999999999999999999998 33 3467788889999999999999999999999998422 11
Q ss_pred ccCCCCCCHHHHHHhcCchHHHHHHHHhhhhc
Q 009183 223 AKDKAGLTPTQLAYDKGHRQVALYLSNAQHMH 254 (541)
Q Consensus 223 ~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~ 254 (541)
..|.+|.||||.|+..|+...++.|+.++...
T Consensus 372 e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I 403 (929)
T KOG0510|consen 372 EADSDGNTALHLAAKYGNTSAVQKLISHGADI 403 (929)
T ss_pred ccccCCchhhhHHHHhccHHHHHHHHHcCCce
Confidence 44999999999999999999999999998776
No 33
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00 E-value=2.9e-31 Score=277.83 Aligned_cols=235 Identities=20% Similarity=0.204 Sum_probs=201.0
Q ss_pred HHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHc--CcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhC------
Q 009183 33 ASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALN--NFADIAQYIIDHGGDVNATDNNGQTALHWAAVRG------ 104 (541)
Q Consensus 33 A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~--~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g------ 104 (541)
.+...+.+.++.|++. |+++|.+ .+|.||||.++.. ++.++|++|+++|+++|.++ .+.||||.|+..+
T Consensus 10 ~~~~~~~~~v~~LL~~-GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~ 86 (494)
T PHA02989 10 YSDTVDKNALEFLLRT-GFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNK 86 (494)
T ss_pred cCCcCcHHHHHHHHHc-CCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhh
Confidence 3446899999999865 9999998 6799998876554 37999999999999999886 5799999998754
Q ss_pred CHHHHHHHHhCCCCCCccccCCChHHHHHHHc---CCHHHHHHHHHhcCCCc-ccCCCCCCcHHHHHHHh--CcHHHHHH
Q 009183 105 SIAVADVLVQNGARVEAADVHGYRAVHVAAQY---GQTSFLNHIVAKYHADY-DASDNEGRSPLHWAAYK--GFADTIRL 178 (541)
Q Consensus 105 ~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~---g~~~~v~~Ll~~~~~~~-~~~d~~g~t~L~~A~~~--~~~~~v~~ 178 (541)
+.+++++|+++|+|++.+|..|.||||.|+.. ++.+++++|+++ |+++ +.+|..|.||||+|+.. ++.+++++
T Consensus 87 ~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~ 165 (494)
T PHA02989 87 IKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK-GINVNDVKNSRGYNLLHMYLESFSVKKDVIKI 165 (494)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC-CCCcccccCCCCCCHHHHHHHhccCCHHHHHH
Confidence 47899999999999999999999999988765 678999999987 9999 89999999999998765 57899999
Q ss_pred HHhcCCCCCc-ccCCCCcHHHHHHHcC----CHHHHHHHHHcCCCCC---------------------------------
Q 009183 179 LLFRDASQGR-QDKDGCTPLHWAALRG----NVEACTVLVHAGTKQE--------------------------------- 220 (541)
Q Consensus 179 Ll~~g~~~~~-~d~~g~tpLh~A~~~g----~~~~v~~Ll~~g~~~~--------------------------------- 220 (541)
|+++|++++. .+..|.||||.|+..+ +.+++++|+++|++.+
T Consensus 166 Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~ 245 (494)
T PHA02989 166 LLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK 245 (494)
T ss_pred HHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh
Confidence 9999999998 6788999999998764 8999999999998532
Q ss_pred ---CcccCCCCCCHHHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHHHHH
Q 009183 221 ---LTAKDKAGLTPTQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSIII 281 (541)
Q Consensus 221 ---~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~i~ 281 (541)
++.+|..|.||||+|++.|+.+++++|++.++... .....|.+|+..+...
T Consensus 246 ~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin----------~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 246 YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIY----------NVSKDGDTVLTYAIKH 299 (494)
T ss_pred CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCcc----------ccCCCCCCHHHHHHHc
Confidence 34567789999999999999999999999887654 2345678888887643
No 34
>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=99.98 E-value=2.8e-32 Score=242.33 Aligned_cols=103 Identities=36% Similarity=0.677 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCCCCcCCccccccccccccCCCCCcCCccchhhhhccCC
Q 009183 315 AVGSLIMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNSPIWTGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDH 394 (541)
Q Consensus 315 ~~~~~~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DH 394 (541)
.++.+++|..+..+|||.+.+....... ...+ -+...+ -...-|.||++.||.||||||+|||||.||||
T Consensus 108 vivp~i~f~ltc~snpg~i~k~n~s~~~-----~~yp---YDy~if--~k~~kCSTCki~KPARSKHCsiCNrCV~rfDH 177 (341)
T KOG1312|consen 108 VIVPLIFFTLTCGSNPGIITKANESLFL-----HVYP---YDYVIF--PKNVKCSTCKIRKPARSKHCSICNRCVHRFDH 177 (341)
T ss_pred HHHHHHHHhhhhcCCCCccchhhhccce-----eccC---ccceee--cCCCccccccCCCccccccchHHHHHHHHhcc
Confidence 3345677778999999999875321110 0000 001111 11245999999999999999999999999999
Q ss_pred cCceeeccccCCchHHHHHHHHHHHHHHHHHHH
Q 009183 395 HCPWISNCVGKRNKRDFFIFLCLGTLTSYLASG 427 (541)
Q Consensus 395 HC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~ 427 (541)
||.|+|||||++|.|||++|+++....+.+.++
T Consensus 178 HCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaiv 210 (341)
T KOG1312|consen 178 HCIWINNCIGAWNIRYFLLFLLTLISLATYAIV 210 (341)
T ss_pred ceEeeecccccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999766666544
No 35
>PHA02798 ankyrin-like protein; Provisional
Probab=99.97 E-value=1.6e-30 Score=271.93 Aligned_cols=230 Identities=18% Similarity=0.246 Sum_probs=196.5
Q ss_pred CCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHc--CcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHh-----CCHHHH
Q 009183 37 GDFEKLRKFVEEDGASVSRPDGNGYFALQWAALN--NFADIAQYIIDHGGDVNATDNNGQTALHWAAVR-----GSIAVA 109 (541)
Q Consensus 37 g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~--~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~-----g~~~~v 109 (541)
=+++.|+.|++. .+++.. ..|.|+++.+... ++.++|++|+++|++++.++..|.||||.|+.. ++.+++
T Consensus 16 ~~~~~v~~ll~~--~~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv 92 (489)
T PHA02798 16 VKLSTVKLLIKS--CNPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIV 92 (489)
T ss_pred ccHHHHHHHHhc--CChhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHH
Confidence 457899999964 344444 4577877755544 489999999999999999999999999998864 679999
Q ss_pred HHHHhCCCCCCccccCCChHHHHHHHcC---CHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCc---HHHHHHHHhcC
Q 009183 110 DVLVQNGARVEAADVHGYRAVHVAAQYG---QTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGF---ADTIRLLLFRD 183 (541)
Q Consensus 110 ~~Ll~~g~~~~~~d~~g~t~l~~A~~~g---~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~---~~~v~~Ll~~g 183 (541)
++|+++|+|++.+|..|.||||+|+..+ +.+++++|+++ |++++.+|..|.||||+|+..++ .+++++|+++|
T Consensus 93 ~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g 171 (489)
T PHA02798 93 KILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIEN-GADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKG 171 (489)
T ss_pred HHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhC
Confidence 9999999999999999999999999876 67999999986 99999999999999999999987 89999999999
Q ss_pred CCCCccc-CCCCcHHHHHHHc----CCHHHHHHHHHcCCCC-------------------------------------CC
Q 009183 184 ASQGRQD-KDGCTPLHWAALR----GNVEACTVLVHAGTKQ-------------------------------------EL 221 (541)
Q Consensus 184 ~~~~~~d-~~g~tpLh~A~~~----g~~~~v~~Ll~~g~~~-------------------------------------~~ 221 (541)
++++.++ ..|.||||.++.. ++.+++++|+++|++. ++
T Consensus 172 adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dv 251 (489)
T PHA02798 172 VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDI 251 (489)
T ss_pred CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCC
Confidence 9999885 4689999998764 4799999999988632 34
Q ss_pred cccCCCCCCHHHHHHhcCchHHHHHHHHhhhhcccccccccccccccCCCCchhHHHHH
Q 009183 222 TAKDKAGLTPTQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTSDIGYAPILFSII 280 (541)
Q Consensus 222 ~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~~~i 280 (541)
+.+|..|.|||++|+..|+.+++++|++.++... .....|.+|+..++.
T Consensus 252 N~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin----------~~d~~G~TpL~~A~~ 300 (489)
T PHA02798 252 NQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDIN----------IITELGNTCLFTAFE 300 (489)
T ss_pred CCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccc----------ccCCCCCcHHHHHHH
Confidence 5578889999999999999999999999887654 234568899888774
No 36
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.97 E-value=2.4e-31 Score=252.37 Aligned_cols=216 Identities=27% Similarity=0.362 Sum_probs=193.2
Q ss_pred HHHHHHcCCHHHHHHHHHhcC-C---CCccCCCCCchHHHHHHHcCcHHHHHHHHh-CCCCCCCC--------CCCCchH
Q 009183 30 VFSASAYGDFEKLRKFVEEDG-A---SVSRPDGNGYFALQWAALNNFADIAQYIID-HGGDVNAT--------DNNGQTA 96 (541)
Q Consensus 30 L~~A~~~g~~~~v~~ll~~~~-~---~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~-~g~~~~~~--------~~~g~tp 96 (541)
.+.|++.|++..+..|+.... . +.-..+.+|-|||-+||++||.++|++|++ .++++... ...|-+|
T Consensus 8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegapp 87 (615)
T KOG0508|consen 8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPP 87 (615)
T ss_pred HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCch
Confidence 348999999999999887533 1 122235678899999999999999999998 57776543 2357899
Q ss_pred HHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHH
Q 009183 97 LHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTI 176 (541)
Q Consensus 97 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v 176 (541)
|-.|+..||+++|+.|+++|+++|.......|||..||.-|+.++++||+++ ++|++..|..|+|.||.||++|+.+++
T Consensus 88 LWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~-gad~~IanrhGhTcLmIa~ykGh~~I~ 166 (615)
T KOG0508|consen 88 LWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEH-GADPEIANRHGHTCLMIACYKGHVDIA 166 (615)
T ss_pred hhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHc-CCCCcccccCCCeeEEeeeccCchHHH
Confidence 9999999999999999999999999988999999999999999999999976 999999999999999999999999999
Q ss_pred HHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHH
Q 009183 177 RLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSN 249 (541)
Q Consensus 177 ~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~ 249 (541)
++|++.|+|+|.++..|+|+||.++.+|+.+++++|+.+|+.. .+|..|.|||..|+..|+.++++.|.+
T Consensus 167 qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i---~~d~~GmtPL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 167 QYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKI---DVDGHGMTPLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred HHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCcee---eecCCCCchHHHHhhhcchHHHHHHhc
Confidence 9999999999999999999999999999999999999999843 468889999999999999999999984
No 37
>PHA02917 ankyrin-like protein; Provisional
Probab=99.97 E-value=2.5e-29 Score=266.94 Aligned_cols=242 Identities=12% Similarity=0.105 Sum_probs=198.9
Q ss_pred EEeeccccCCCCCCCCCCcchhhHHHHHHc---CCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHH----HHHHH
Q 009183 7 EVVSSTEAIPNENQNDNQAAVTDVFSASAY---GDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFAD----IAQYI 79 (541)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~----iv~~L 79 (541)
|.++.+..........++.|.||||.|+.. |+.++++.||+ .|++++.+|..|.||||+|+..|+.+ +++.|
T Consensus 13 ~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~-~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~L 91 (661)
T PHA02917 13 DELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLD-SGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMAL 91 (661)
T ss_pred HHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHH
Confidence 344555556666667788999999997555 88999999987 49999999999999999999999854 56788
Q ss_pred HhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHH--HcCCHHHHHHHHHhcCCCcccCC
Q 009183 80 IDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAA--QYGQTSFLNHIVAKYHADYDASD 157 (541)
Q Consensus 80 l~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~--~~g~~~~v~~Ll~~~~~~~~~~d 157 (541)
++.+...+..+ ..+++|+|+..|+.+++++|+++|+|++.+|..|.||||.|+ ..|+.+++++|++. |++++.+|
T Consensus 92 l~~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~-Ga~vn~~d 168 (661)
T PHA02917 92 LEATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN-GCSVLYED 168 (661)
T ss_pred HhccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc-CCCccccc
Confidence 87754445443 237788999999999999999999999999999999999654 57899999999987 99987655
Q ss_pred C---CC-----------CcHHHHHHH-----------hCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCH--HHHH
Q 009183 158 N---EG-----------RSPLHWAAY-----------KGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNV--EACT 210 (541)
Q Consensus 158 ~---~g-----------~t~L~~A~~-----------~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~--~~v~ 210 (541)
. .| .||||+|+. .++.+++++|+++|++++.+|.+|.||||+|+.+|+. ++|+
T Consensus 169 ~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk 248 (661)
T PHA02917 169 EDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVK 248 (661)
T ss_pred cccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHH
Confidence 3 23 599999986 4578999999999999999999999999999999985 7999
Q ss_pred HHHHcCCCCC--CcccCCCCCCHHHHHHh-------c--CchHHHHHHHHhhhh
Q 009183 211 VLVHAGTKQE--LTAKDKAGLTPTQLAYD-------K--GHRQVALYLSNAQHM 253 (541)
Q Consensus 211 ~Ll~~g~~~~--~~~~d~~g~t~l~~A~~-------~--~~~~i~~~L~~~~~~ 253 (541)
+|++ |++.+ ....|..|.+|+++|+. + .+.+++++|++.++.
T Consensus 249 ~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~ 301 (661)
T PHA02917 249 LLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP 301 (661)
T ss_pred HHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC
Confidence 9975 76322 12466778889999983 1 267999999998864
No 38
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1e-28 Score=227.49 Aligned_cols=174 Identities=17% Similarity=0.191 Sum_probs=106.3
Q ss_pred CCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhC--CHHHHHHHHhCCCCCCccc-cCCChHHHHHHH
Q 009183 59 NGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRG--SIAVADVLVQNGARVEAAD-VHGYRAVHVAAQ 135 (541)
Q Consensus 59 ~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~g~~~~~~d-~~g~t~l~~A~~ 135 (541)
.+.||||+|+..|+.++|+.|++. ++..+..|.||||+|+..+ +.+++++|+++|++++.++ ..|.||||+|+.
T Consensus 20 ~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~ 96 (209)
T PHA02859 20 RYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLS 96 (209)
T ss_pred ccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHH
Confidence 445666666666666666666553 3444555666666665533 5666666666666666654 356666666543
Q ss_pred c---CCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHH--hCcHHHHHHHHhcCCCCCcccCCCCcHHHH-HHHcCCHHHH
Q 009183 136 Y---GQTSFLNHIVAKYHADYDASDNEGRSPLHWAAY--KGFADTIRLLLFRDASQGRQDKDGCTPLHW-AALRGNVEAC 209 (541)
Q Consensus 136 ~---g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~--~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~-A~~~g~~~~v 209 (541)
. ++.+++++|+++ |++++.+|..|.||||+|+. .++.+++++|+++|++++.+|.+|.||||. |+..++.+++
T Consensus 97 ~~~~~~~eiv~~Ll~~-gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv 175 (209)
T PHA02859 97 FNKNVEPEILKILIDS-GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIF 175 (209)
T ss_pred hCccccHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHH
Confidence 2 345666666644 66666666666666666554 345666777777777776666667777764 4455666777
Q ss_pred HHHHHcCCCCCCcccCCCCCCHHHHHHhc
Q 009183 210 TVLVHAGTKQELTAKDKAGLTPTQLAYDK 238 (541)
Q Consensus 210 ~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~ 238 (541)
++|+++|+ +++.+|..|+||+++|..+
T Consensus 176 ~~Ll~~Ga--di~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 176 DFLTSLGI--DINETNKSGYNCYDLIKFR 202 (209)
T ss_pred HHHHHcCC--CCCCCCCCCCCHHHHHhhh
Confidence 77776666 5556666677777776654
No 39
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96 E-value=1.3e-28 Score=226.80 Aligned_cols=177 Identities=15% Similarity=0.187 Sum_probs=160.5
Q ss_pred CCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcC--cHHHHHHHHhCCCCCCCCC-CCCchHHHH
Q 009183 23 NQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNN--FADIAQYIIDHGGDVNATD-NNGQTALHW 99 (541)
Q Consensus 23 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~--~~~iv~~Ll~~g~~~~~~~-~~g~tpL~~ 99 (541)
.+...+||+.|++.|+++.++.|++. ++..|..|.||||+|+.++ +.+++++|+++|++++.++ ..|.||||+
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHH 93 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHH
Confidence 45668999999999999999999864 5778899999999999865 8999999999999999997 479999999
Q ss_pred HHHh---CCHHHHHHHHhCCCCCCccccCCChHHHHHHH--cCCHHHHHHHHHhcCCCcccCCCCCCcHHHH-HHHhCcH
Q 009183 100 AAVR---GSIAVADVLVQNGARVEAADVHGYRAVHVAAQ--YGQTSFLNHIVAKYHADYDASDNEGRSPLHW-AAYKGFA 173 (541)
Q Consensus 100 A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~-A~~~~~~ 173 (541)
|+.. ++.+++++|+++|++++.+|..|.||||.|+. .++.+++++|++. |++++.+|..|.||||. |+..++.
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~-gadin~~d~~g~t~Lh~~a~~~~~~ 172 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS-GVSFLNKDFDNNNILYSYILFHSDK 172 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCcccccCCCCcHHHHHHHhcCCH
Confidence 8764 47999999999999999999999999999986 4689999999976 99999999999999995 5678899
Q ss_pred HHHHHHHhcCCCCCcccCCCCcHHHHHHHcC
Q 009183 174 DTIRLLLFRDASQGRQDKDGCTPLHWAALRG 204 (541)
Q Consensus 174 ~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g 204 (541)
+++++|+++|++++.+|..|.||||+|..++
T Consensus 173 ~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 173 KIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 9999999999999999999999999998764
No 40
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.8e-28 Score=242.28 Aligned_cols=207 Identities=15% Similarity=0.116 Sum_probs=184.5
Q ss_pred CHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCC------CCCCCCchHHHHHHH--hCCHHHH
Q 009183 38 DFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVN------ATDNNGQTALHWAAV--RGSIAVA 109 (541)
Q Consensus 38 ~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~------~~~~~g~tpL~~A~~--~g~~~~v 109 (541)
-.+++-+++..+|+++|..+.+| +|+..+..|++++|+++|++++ .++..++|+||.|+. .|+.+++
T Consensus 60 ~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV 134 (437)
T PHA02795 60 PVDVLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIV 134 (437)
T ss_pred HHHHHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHH
Confidence 45667777778899999988888 8999999999999999999998 777889999999999 8999999
Q ss_pred HHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcc-cC-----CCCCCcHHHHHHHhCcHHHHHHHHhcC
Q 009183 110 DVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYD-AS-----DNEGRSPLHWAAYKGFADTIRLLLFRD 183 (541)
Q Consensus 110 ~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~-~~-----d~~g~t~L~~A~~~~~~~~v~~Ll~~g 183 (541)
++|+++|||++.++ +.||+|.|+..++.+++++|+++ |++.+ .. +..+.+++|.|+..++.+++++|+++|
T Consensus 135 ~~LI~~GADIn~~~--~~t~lh~A~~~~~~eIVk~Lls~-Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G 211 (437)
T PHA02795 135 DFMVDHGAVIYKIE--CLNAYFRGICKKESSVVEFILNC-GIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI 211 (437)
T ss_pred HHHHHCCCCCCCCC--CCCHHHHHHHcCcHHHHHHHHhc-CCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc
Confidence 99999999998754 58999999999999999999987 65332 22 234779999999999999999999999
Q ss_pred CCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC--------chHHHHHHHHhhhhc
Q 009183 184 ASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKG--------HRQVALYLSNAQHMH 254 (541)
Q Consensus 184 ~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~--------~~~i~~~L~~~~~~~ 254 (541)
++++.+|..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+.+| +.+++++|+++++..
T Consensus 212 ADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA--dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI 288 (437)
T PHA02795 212 EDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGA--NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSI 288 (437)
T ss_pred CCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCC
Confidence 9999999999999999999999999999999998 78889999999999999998 468999998876643
No 41
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96 E-value=1.9e-29 Score=239.56 Aligned_cols=192 Identities=26% Similarity=0.348 Sum_probs=179.2
Q ss_pred CCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccC--------CCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCC
Q 009183 22 DNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRP--------DGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNG 93 (541)
Q Consensus 22 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~--------d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g 93 (541)
...+|.+||..||++|+.++|++|++..++++... ..+|-+||-.|+..||+++||.|+++|+++|.....+
T Consensus 38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TN 117 (615)
T KOG0508|consen 38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTN 117 (615)
T ss_pred cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccC
Confidence 45567799999999999999999999877776543 3578899999999999999999999999999999999
Q ss_pred chHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcH
Q 009183 94 QTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFA 173 (541)
Q Consensus 94 ~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~ 173 (541)
.|||-.||.-|+.+++++|+++|+|++..|..|.|.|++||..|+.+++++|++. |++++.++..|+|+||.|+..|+.
T Consensus 118 StPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~-gADvn~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 118 STPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQ-GADVNAKSYKGNTALHDCAESGSV 196 (615)
T ss_pred CccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHh-CCCcchhcccCchHHHhhhhcccH
Confidence 9999999999999999999999999999999999999999999999999999987 999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHc
Q 009183 174 DTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHA 215 (541)
Q Consensus 174 ~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 215 (541)
+++++|+++|+.+. +|..|.|||..|+..|+.++|..|++.
T Consensus 197 divq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 197 DIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred HHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence 99999999999877 466699999999999999999999963
No 42
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.96 E-value=4.3e-30 Score=275.24 Aligned_cols=244 Identities=28% Similarity=0.388 Sum_probs=218.3
Q ss_pred EEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCC
Q 009183 7 EVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDV 86 (541)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~ 86 (541)
++...+..........++.+.++++.|+.+|..+.++.++.+ +.+++..+..|.||||.|+..++.++++.++++|+++
T Consensus 355 ~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~-ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~ 433 (1143)
T KOG4177|consen 355 EVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEA-GADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASP 433 (1143)
T ss_pred HHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhc-cCCcccCCCCCcceeeehhhccCcceEEEEeccCCCh
Confidence 345566666677777888899999999999999998877765 8889999999999999999999999999999999999
Q ss_pred CCCCCCCchHHHHHHHhC-CHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHh-----------------
Q 009183 87 NATDNNGQTALHWAAVRG-SIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAK----------------- 148 (541)
Q Consensus 87 ~~~~~~g~tpL~~A~~~g-~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~----------------- 148 (541)
+..+..|+||+|.|+..| ..++...+++.|++++..-..|.||||.|++.|+.+++..+++.
T Consensus 434 ~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhl 513 (1143)
T KOG4177|consen 434 NAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHL 513 (1143)
T ss_pred hhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhh
Confidence 999999999999999998 88888899999999999999999999999999998888877763
Q ss_pred ---------------cCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHH
Q 009183 149 ---------------YHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLV 213 (541)
Q Consensus 149 ---------------~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 213 (541)
.|++.+.++..|.||||.|+..|+.++|++|+++|++++.+|+.|+||||.|+..|+.+++.+|+
T Consensus 514 a~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLl 593 (1143)
T KOG4177|consen 514 AADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLL 593 (1143)
T ss_pred hhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHH
Confidence 35667778888999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhhh
Q 009183 214 HAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQHM 253 (541)
Q Consensus 214 ~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~ 253 (541)
++|+ +++..|.+|.|||++|++.|+.++++.|......
T Consensus 594 k~GA--~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~ 631 (1143)
T KOG4177|consen 594 KHGA--SVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT 631 (1143)
T ss_pred HcCC--CCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence 9999 7888999999999999999999999999876654
No 43
>PHA02917 ankyrin-like protein; Provisional
Probab=99.96 E-value=2.8e-28 Score=258.98 Aligned_cols=205 Identities=17% Similarity=0.157 Sum_probs=177.7
Q ss_pred HHHHHHHHHhcCCCCccCCCCCchHHHHHHHc---CcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCH----HHHHH
Q 009183 39 FEKLRKFVEEDGASVSRPDGNGYFALQWAALN---NFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSI----AVADV 111 (541)
Q Consensus 39 ~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~---~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~----~~v~~ 111 (541)
++.+++++. ++..++.+|.+|.||||+|+.. |+.++|++|+++|++++.++..|.||||+|+..|+. ++++.
T Consensus 12 ~~~~~~l~~-~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~ 90 (661)
T PHA02917 12 LDELKQMLR-DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMA 90 (661)
T ss_pred HHHHHHHHh-ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHH
Confidence 577888887 5777888899999999998665 889999999999999999999999999999999984 46678
Q ss_pred HHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHH--HHhCcHHHHHHHHhcCCCCCcc
Q 009183 112 LVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWA--AYKGFADTIRLLLFRDASQGRQ 189 (541)
Q Consensus 112 Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A--~~~~~~~~v~~Ll~~g~~~~~~ 189 (541)
|++.+...+..+. .++++.|+..++.+++++|+++ |++++.+|..|.||||.| +..|+.+++++|+++|++++.+
T Consensus 91 Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~ 167 (661)
T PHA02917 91 LLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEH-GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYE 167 (661)
T ss_pred HHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHc-CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccc
Confidence 8887544554443 3677889999999999999987 999999999999999965 3578999999999999999866
Q ss_pred cC---CC-----------CcHHHHHHH-----------cCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCch--H
Q 009183 190 DK---DG-----------CTPLHWAAL-----------RGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHR--Q 242 (541)
Q Consensus 190 d~---~g-----------~tpLh~A~~-----------~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~--~ 242 (541)
|. .| .||||+|+. .++.+++++|+++|+ +++.+|..|.||||+|+++|+. +
T Consensus 168 d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Ga--dvn~~d~~G~TpLh~A~~~g~~~~e 245 (661)
T PHA02917 168 DEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGI--KPSSIDKNYCTALQYYIKSSHIDID 245 (661)
T ss_pred ccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCC--CcccCCCCCCcHHHHHHHcCCCcHH
Confidence 53 24 599999986 468999999999998 7889999999999999999985 7
Q ss_pred HHHHHHH
Q 009183 243 VALYLSN 249 (541)
Q Consensus 243 i~~~L~~ 249 (541)
++++|.+
T Consensus 246 ivk~Li~ 252 (661)
T PHA02917 246 IVKLLMK 252 (661)
T ss_pred HHHHHHh
Confidence 9999975
No 44
>PHA02730 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.5e-27 Score=246.66 Aligned_cols=246 Identities=15% Similarity=0.143 Sum_probs=199.3
Q ss_pred CceEEeeccccCCCCCC-------CCCCcchhh-HHH------HHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHH--H
Q 009183 4 SEIEVVSSTEAIPNENQ-------NDNQAAVTD-VFS------ASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQW--A 67 (541)
Q Consensus 4 ~~~~~~~~l~~~~~~~~-------~~~~~~~~~-L~~------A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~--A 67 (541)
...++++.|.+.+.+.. ..+.+..+| |+. +..++..|+++.|++ +|+++|.+|.+|.||||+ |
T Consensus 166 ~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs-~GadIN~kd~~G~TpLh~~~~ 244 (672)
T PHA02730 166 PRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLID-NNVSIHGRDEGGSLPIQYYWS 244 (672)
T ss_pred CchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHH
Confidence 56677777777766663 234445544 331 256788888887775 599999999999999995 5
Q ss_pred HHcCcHHHHHHHHh--------------------------------CCCCCCC--------------------CCCCCch
Q 009183 68 ALNNFADIAQYIID--------------------------------HGGDVNA--------------------TDNNGQT 95 (541)
Q Consensus 68 ~~~~~~~iv~~Ll~--------------------------------~g~~~~~--------------------~~~~g~t 95 (541)
+..|+.|+|++|++ +|+|+.. .+..|.+
T Consensus 245 ~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n 324 (672)
T PHA02730 245 CSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYN 324 (672)
T ss_pred cCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccc
Confidence 55677999999999 7887654 4455544
Q ss_pred ---------------------HHHHHHHhC---CHHHHHHHHhCCCCCCccccCCChHHHHHHHcCC----HHHHHHHHH
Q 009183 96 ---------------------ALHWAAVRG---SIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQ----TSFLNHIVA 147 (541)
Q Consensus 96 ---------------------pL~~A~~~g---~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~----~~~v~~Ll~ 147 (541)
.||.-.+.+ +.+++++|+++||+++.+ ..|.||||+|+..++ .+++++|++
T Consensus 325 ~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs 403 (672)
T PHA02730 325 HYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVE 403 (672)
T ss_pred hhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHH
Confidence 666666655 699999999999999985 789999999998875 799999998
Q ss_pred hcCC--CcccCCCCCCcHHHH---HHHhC---------cHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHH
Q 009183 148 KYHA--DYDASDNEGRSPLHW---AAYKG---------FADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLV 213 (541)
Q Consensus 148 ~~~~--~~~~~d~~g~t~L~~---A~~~~---------~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 213 (541)
+ |+ +++.+|..|.||||. |...+ ..+++++|+++|++++.+|..|.||||+|+..++.+++++|+
T Consensus 404 ~-Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI 482 (672)
T PHA02730 404 N-NGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLL 482 (672)
T ss_pred c-CCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence 7 54 689999999999984 33232 235799999999999999999999999999999999999999
Q ss_pred HcCCCCCCcccCC-CCCCHHHHHHhc--CchHHHHHHHHhhhhc
Q 009183 214 HAGTKQELTAKDK-AGLTPTQLAYDK--GHRQVALYLSNAQHMH 254 (541)
Q Consensus 214 ~~g~~~~~~~~d~-~g~t~l~~A~~~--~~~~i~~~L~~~~~~~ 254 (541)
++|+ +++.+|. .|.||++.|+.. ++.+++++|+++++..
T Consensus 483 ~~GA--dIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i 524 (672)
T PHA02730 483 EYGA--SVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL 524 (672)
T ss_pred HCCC--CCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence 9998 7888886 599999999874 7899999999887643
No 45
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=4e-27 Score=232.74 Aligned_cols=182 Identities=17% Similarity=0.168 Sum_probs=165.6
Q ss_pred HHHHcCCHHHHHHHHHhcCCCCc------cCCCCCchHHHHHHH--cCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHh
Q 009183 32 SASAYGDFEKLRKFVEEDGASVS------RPDGNGYFALQWAAL--NNFADIAQYIIDHGGDVNATDNNGQTALHWAAVR 103 (541)
Q Consensus 32 ~A~~~g~~~~v~~ll~~~~~~~~------~~d~~g~t~Lh~A~~--~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~ 103 (541)
.|+..+..|+++.|+. .+++++ .++..+.|+||.|+. .|+.++|++|+++||+++.. ++.||+|.|+..
T Consensus 83 ~~~~~~~k~~~~~l~s-~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~ 159 (437)
T PHA02795 83 LFAYITYKDIISALVS-KNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK 159 (437)
T ss_pred HHhhcchHHHHHHHHh-cccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc
Confidence 7888888888877765 588888 788899999999999 89999999999999999885 458999999999
Q ss_pred CCHHHHHHHHhCCCCCCccc------cCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHH
Q 009183 104 GSIAVADVLVQNGARVEAAD------VHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIR 177 (541)
Q Consensus 104 g~~~~v~~Ll~~g~~~~~~d------~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 177 (541)
|+.+++++|+++|++..... ..+.+++|.|+..++.+++++|++. |++++.+|..|.||||+|+..|+.++++
T Consensus 160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~kD~~G~TpLh~Aa~~g~~eiVe 238 (437)
T PHA02795 160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQLDAGGRTLLYRAIYAGYIDLVS 238 (437)
T ss_pred CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhC-cCCcCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999998543222 3478899999999999999999976 9999999999999999999999999999
Q ss_pred HHHhcCCCCCcccCCCCcHHHHHHHcCC--------HHHHHHHHHcCC
Q 009183 178 LLLFRDASQGRQDKDGCTPLHWAALRGN--------VEACTVLVHAGT 217 (541)
Q Consensus 178 ~Ll~~g~~~~~~d~~g~tpLh~A~~~g~--------~~~v~~Ll~~g~ 217 (541)
+|+++|++++.+|..|.||||+|+..|+ .+++++|+++|+
T Consensus 239 lLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga 286 (437)
T PHA02795 239 WLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL 286 (437)
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence 9999999999999999999999999984 699999999998
No 46
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95 E-value=3.6e-27 Score=241.30 Aligned_cols=228 Identities=14% Similarity=0.121 Sum_probs=180.4
Q ss_pred CceEEeeccccCCCCCCCCCCcchhhHHHHHH-cCCHHHHHHHHHhcCCC------------------------------
Q 009183 4 SEIEVVSSTEAIPNENQNDNQAAVTDVFSASA-YGDFEKLRKFVEEDGAS------------------------------ 52 (541)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~-~g~~~~v~~ll~~~~~~------------------------------ 52 (541)
++.|+++.|.+.+++.+..+..+.++++.|+. .|+.|+++.|++. |++
T Consensus 83 ~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~-Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 161 (631)
T PHA02792 83 IDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDK-GIPTCSNIQYGYKIIIEQITRAEYYNWDDELDD 161 (631)
T ss_pred ccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHC-CCCcccccccCcchhhhhcccccccchhhhccc
Confidence 56677888888888777777778888888865 6889999888876 544
Q ss_pred ------CccCCCCCchHHHHHHHcC-------cHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhC--CHHHHHHHHh---
Q 009183 53 ------VSRPDGNGYFALQWAALNN-------FADIAQYIIDHGGDVNATDNNGQTALHWAAVRG--SIAVADVLVQ--- 114 (541)
Q Consensus 53 ------~~~~d~~g~t~Lh~A~~~~-------~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~--- 114 (541)
+|..|..|.||||+|+.++ +.|+++.|+++|++++..|..|.||||+|+... +.|++++|++
T Consensus 162 ~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~ 241 (631)
T PHA02792 162 YDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNY 241 (631)
T ss_pred cccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccc
Confidence 2244566889999999988 789999999999999999888999999998888 5566665543
Q ss_pred --------------------------------------------------------------------------------
Q 009183 115 -------------------------------------------------------------------------------- 114 (541)
Q Consensus 115 -------------------------------------------------------------------------------- 114 (541)
T Consensus 242 ~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~i 321 (631)
T PHA02792 242 SGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYI 321 (631)
T ss_pred cccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccH
Confidence
Q ss_pred --------CCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCC--CcHHHHHHHhCcH---HHHHHHHh
Q 009183 115 --------NGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEG--RSPLHWAAYKGFA---DTIRLLLF 181 (541)
Q Consensus 115 --------~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g--~t~L~~A~~~~~~---~~v~~Ll~ 181 (541)
+|++.. .....++++.|+..|+.+++++|+++ |++++.+|..| .||||.|+..... +++++|++
T Consensus 322 eiIK~LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs 398 (631)
T PHA02792 322 NVIKCMIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKN-GNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKP 398 (631)
T ss_pred HHHHHHHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHc-CCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHh
Confidence 233221 11245567888888899999988876 88888888775 5888887776654 35788888
Q ss_pred cCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q 009183 182 RDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYD 237 (541)
Q Consensus 182 ~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~ 237 (541)
+|++++.+|..|.||||+|+..++.+++++|+++|+ +++.+|..|.||+++|..
T Consensus 399 ~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GA--DIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 399 YIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGA--DINITTKYGSTCIGICVI 452 (631)
T ss_pred cCCccccccccCcchHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999999999999999987 677889999999999875
No 47
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95 E-value=9.7e-27 Score=238.13 Aligned_cols=256 Identities=13% Similarity=0.068 Sum_probs=204.8
Q ss_pred eeccccCCCCCCCCCCcchhhHH-HHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHH-cCcHHHHHHHHhCCCCC
Q 009183 9 VSSTEAIPNENQNDNQAAVTDVF-SASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAAL-NNFADIAQYIIDHGGDV 86 (541)
Q Consensus 9 ~~~l~~~~~~~~~~~~~~~~~L~-~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~-~~~~~iv~~Ll~~g~~~ 86 (541)
+-.+...++. .+.++.++++ .|+..|++|+++.|+++ |+++|.++..|.||+|+|+. .++.|++++|+++|+++
T Consensus 57 ~~~~~~~~~~---~n~~~~~~~~~~~s~n~~lElvk~LI~~-GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~ 132 (631)
T PHA02792 57 VILLLSSVDY---KNINDFDIFEYLCSDNIDIELLKLLISK-GLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPT 132 (631)
T ss_pred HHHHHhCCCc---CccCCccHHHHHHHhcccHHHHHHHHHc-CCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCc
Confidence 3344444443 3334445775 67788999999999985 99999999999999999976 69999999999999873
Q ss_pred C------------------------------------CCCCCCchHHHHHHHhC-------CHHHHHHHHhCCCCCCccc
Q 009183 87 N------------------------------------ATDNNGQTALHWAAVRG-------SIAVADVLVQNGARVEAAD 123 (541)
Q Consensus 87 ~------------------------------------~~~~~g~tpL~~A~~~g-------~~~~v~~Ll~~g~~~~~~d 123 (541)
+ ..+..|.||||+|+..+ +.++++.|+++|++++.+|
T Consensus 133 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d 212 (631)
T PHA02792 133 CSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYT 212 (631)
T ss_pred ccccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccC
Confidence 2 23456999999999999 8999999999999999999
Q ss_pred cCCChHHHHHHHcC--CHHHHHHHHHhcC---------------------CCccc-------------------------
Q 009183 124 VHGYRAVHVAAQYG--QTSFLNHIVAKYH---------------------ADYDA------------------------- 155 (541)
Q Consensus 124 ~~g~t~l~~A~~~g--~~~~v~~Ll~~~~---------------------~~~~~------------------------- 155 (541)
..|.||||+|+.+. ..++++.|+.... .++|.
T Consensus 213 ~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~ 292 (631)
T PHA02792 213 YREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNN 292 (631)
T ss_pred CCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhh
Confidence 99999999999988 6677777765300 00010
Q ss_pred ------------------------------------------CCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCC
Q 009183 156 ------------------------------------------SDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDG 193 (541)
Q Consensus 156 ------------------------------------------~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g 193 (541)
....+..+++.|+..|+.+++++|+++|++++.+|.+|
T Consensus 293 ~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g 372 (631)
T PHA02792 293 IIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNI 372 (631)
T ss_pred hHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCC
Confidence 00124456889999999999999999999999999875
Q ss_pred --CcHHHHHHHcCCHH---HHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhhhccccccccccccccc
Q 009183 194 --CTPLHWAALRGNVE---ACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQHMHRNHWGDKICGRKTS 268 (541)
Q Consensus 194 --~tpLh~A~~~g~~~---~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~~~~~~~~~~~~~~~~ 268 (541)
.||||.|+.....+ ++++|+++|+ +++.+|..|.||||+|+..++.+++++|.++++... ...
T Consensus 373 ~~~TpLh~A~~n~~~~v~~IlklLIs~GA--DIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN----------~kD 440 (631)
T PHA02792 373 INIMPLFPTLSIHESDVLSILKLCKPYID--DINKIDKHGRSILYYCIESHSVSLVEWLIDNGADIN----------ITT 440 (631)
T ss_pred CChhHHHHHHHhccHhHHHHHHHHHhcCC--ccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCC----------CcC
Confidence 69999988776654 5788999998 788899999999999999999999999999876543 234
Q ss_pred CCCCchhHHHHH
Q 009183 269 DIGYAPILFSII 280 (541)
Q Consensus 269 ~lg~~~l~~~~i 280 (541)
..|.+|+..+..
T Consensus 441 ~~G~TpL~~A~~ 452 (631)
T PHA02792 441 KYGSTCIGICVI 452 (631)
T ss_pred CCCCCHHHHHHH
Confidence 457788877654
No 48
>PHA02730 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.1e-26 Score=238.33 Aligned_cols=205 Identities=16% Similarity=0.165 Sum_probs=172.7
Q ss_pred HHHHHHhcCCCCc-cCCCCCchHHHHHHHcC---cHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhC--CHHHHHHHHhC
Q 009183 42 LRKFVEEDGASVS-RPDGNGYFALQWAALNN---FADIAQYIIDHGGDVNATDNNGQTALHWAAVRG--SIAVADVLVQN 115 (541)
Q Consensus 42 v~~ll~~~~~~~~-~~d~~g~t~Lh~A~~~~---~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g--~~~~v~~Ll~~ 115 (541)
++..++. -.++| .+|.+|.||||+|+.+| +.++|++|+++||+++.+|..|.||||+|+..+ +.+++++|+++
T Consensus 23 ~~~~~~~-~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~ 101 (672)
T PHA02730 23 IKLEIET-CHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISS 101 (672)
T ss_pred HHHHHHH-hcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhc
Confidence 4444443 44666 88899999999999997 599999999999999999999999999999977 79999999999
Q ss_pred CCC--CCccccCCChHHHHHHH--cCCHHHHHHHHHhcCCCcccCCC-----CCCcHHHHHHHhCcHHHHHHHHhcCCCC
Q 009183 116 GAR--VEAADVHGYRAVHVAAQ--YGQTSFLNHIVAKYHADYDASDN-----EGRSPLHWAAYKGFADTIRLLLFRDASQ 186 (541)
Q Consensus 116 g~~--~~~~d~~g~t~l~~A~~--~g~~~~v~~Ll~~~~~~~~~~d~-----~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 186 (541)
|++ ++..+..+.+|+|.++. +++.+++++|++..+.+++.... .|.+|++.|+..++.++|++|+++|+++
T Consensus 102 ~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v 181 (672)
T PHA02730 102 YSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYS 181 (672)
T ss_pred CCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcc
Confidence 654 47788788999999988 88899999999765778776633 7899999999999999999999999999
Q ss_pred C-------cccCCCC-cHHHHH------HHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHH--HHhcCchHHHHHHHH
Q 009183 187 G-------RQDKDGC-TPLHWA------ALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQL--AYDKGHRQVALYLSN 249 (541)
Q Consensus 187 ~-------~~d~~g~-tpLh~A------~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~--A~~~~~~~i~~~L~~ 249 (541)
+ ..|..+. |.||++ ..+++.|++++|+++|+ +++.+|..|.||||+ |...|+.|++++|.+
T Consensus 182 ~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~Ga--dIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 182 TGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNV--SIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred cccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 5 2344444 455533 45578999999999998 889999999999995 556678999999998
No 49
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.94 E-value=1.9e-25 Score=245.33 Aligned_cols=226 Identities=21% Similarity=0.203 Sum_probs=185.7
Q ss_pred CCCcchhhHHHHHHcCCHHHHHHHHHhc-CCCCccCCCCCchHHH-HHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHH
Q 009183 22 DNQAAVTDVFSASAYGDFEKLRKFVEED-GASVSRPDGNGYFALQ-WAALNNFADIAQYIIDHGGDVNATDNNGQTALHW 99 (541)
Q Consensus 22 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~-~~~~~~~d~~g~t~Lh-~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~ 99 (541)
.-..++..++.|++.|+.+.++.++++. +.++|..|..|.|||| .|+.+++.+++++|+++|+ .+..|.||||.
T Consensus 13 ~~~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~ 88 (743)
T TIGR00870 13 PLSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHA 88 (743)
T ss_pred CCCHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHH
Confidence 3456788999999999999999999753 6889999999999999 8999999999999999987 66789999999
Q ss_pred HHHhC---CHHHHHHHHhCCCC------CC----ccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCC---------
Q 009183 100 AAVRG---SIAVADVLVQNGAR------VE----AADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASD--------- 157 (541)
Q Consensus 100 A~~~g---~~~~v~~Ll~~g~~------~~----~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d--------- 157 (541)
|+..+ ...+++.+.+.+.+ ++ ..+..|.||||+|+..|+.++++.|+++ |++++.++
T Consensus 89 A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~ 167 (743)
T TIGR00870 89 ISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQ 167 (743)
T ss_pred HHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCC
Confidence 98722 23344444444422 11 1235699999999999999999999986 88888653
Q ss_pred -----CCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcC---------CHHHHHHHHHcCCCC-CC-
Q 009183 158 -----NEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRG---------NVEACTVLVHAGTKQ-EL- 221 (541)
Q Consensus 158 -----~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g---------~~~~v~~Ll~~g~~~-~~- 221 (541)
..|.||||.|+..|+.+++++|++.|++++.+|..|+||||+|+..+ ...+.+.+++.++.. +.
T Consensus 168 ~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~ 247 (743)
T TIGR00870 168 GVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSK 247 (743)
T ss_pred CCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChH
Confidence 35889999999999999999999999999999999999999999987 234556676665531 22
Q ss_pred ---cccCCCCCCHHHHHHhcCchHHHHHHHHhhh
Q 009183 222 ---TAKDKAGLTPTQLAYDKGHRQVALYLSNAQH 252 (541)
Q Consensus 222 ---~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~ 252 (541)
..+|.+|.||+++|++.|+.+++++|++.+.
T Consensus 248 el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~ 281 (743)
T TIGR00870 248 ELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKY 281 (743)
T ss_pred hhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHH
Confidence 5679999999999999999999999988543
No 50
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.94 E-value=2.5e-26 Score=246.50 Aligned_cols=236 Identities=27% Similarity=0.413 Sum_probs=211.3
Q ss_pred CceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCC
Q 009183 4 SEIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHG 83 (541)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g 83 (541)
++.++++-+.+........+..|.|++|.|+..|.......++.+.+.++|....+|.||||.|+..|+.++++.|++.+
T Consensus 418 ~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~ 497 (1143)
T KOG4177|consen 418 GNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGG 497 (1143)
T ss_pred cCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcC
Confidence 45566666666666777777888999999999995555555666779999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcH
Q 009183 84 GDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSP 163 (541)
Q Consensus 84 ~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~ 163 (541)
+..+.....+.+++|.|...+....++.++++|++++.++..|+||||.|+.+|+.++|++|+++ |++++.+|+.|+||
T Consensus 498 ~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~-gAdv~ak~~~G~TP 576 (1143)
T KOG4177|consen 498 ANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEH-GADVNAKDKLGYTP 576 (1143)
T ss_pred CccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhC-CccccccCCCCCCh
Confidence 88888888899999999999999999999999999999999999999999999999999999987 99999999999999
Q ss_pred HHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---CCcccCCCCCCHHHHHHhcCc
Q 009183 164 LHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQ---ELTAKDKAGLTPTQLAYDKGH 240 (541)
Q Consensus 164 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~---~~~~~d~~g~t~l~~A~~~~~ 240 (541)
||.||..|+.+++++|+++|+++|..|.+|.||||.|+..|+.++++.|+..+++. +...++..|.+|.+++.....
T Consensus 577 LH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~~~ 656 (1143)
T KOG4177|consen 577 LHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEELDT 656 (1143)
T ss_pred hhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999998741 145567899999999877543
No 51
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.94 E-value=1.4e-26 Score=199.09 Aligned_cols=221 Identities=25% Similarity=0.305 Sum_probs=200.1
Q ss_pred CCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHH
Q 009183 23 NQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAV 102 (541)
Q Consensus 23 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~ 102 (541)
+..|+..+-.+.++|+-+.....+.-.+..+...|.+|+.++|.|+-.++.+.+..++.+|+..|..+--+.+|+.+++.
T Consensus 59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVh 138 (296)
T KOG0502|consen 59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVH 138 (296)
T ss_pred HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHH
Confidence 44566667788888988888877766666677788899999999999999999999999999999999999999999999
Q ss_pred hCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhc
Q 009183 103 RGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFR 182 (541)
Q Consensus 103 ~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 182 (541)
+.+++.+..+.++ .+|..|+.|.|||.+|+..|+.++|++|++. |++++...+...++|+.|+..|..++|++|+.+
T Consensus 139 ql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~-GAdp~~lgk~resALsLAt~ggytdiV~lLL~r 215 (296)
T KOG0502|consen 139 QLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAKGHIPVVQFLLNS-GADPDALGKYRESALSLATRGGYTDIVELLLTR 215 (296)
T ss_pred HHHHHHHHHHhhc--cccCccccCchHhHHHHhcCchHHHHHHHHc-CCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc
Confidence 9999988887775 5678999999999999999999999999976 999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHH
Q 009183 183 DASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLS 248 (541)
Q Consensus 183 g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~ 248 (541)
+.|+|..|.+|-|||-+|++.++.++++.|++.|+ +++..|..|.+++++|+..|+..+-+.+.
T Consensus 216 ~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA--d~t~e~dsGy~~mdlAValGyr~Vqqvie 279 (296)
T KOG0502|consen 216 EVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA--DVTQEDDSGYWIMDLAVALGYRIVQQVIE 279 (296)
T ss_pred CCCcceeccCCCceeeeeecCChHHHHHHHHhcCC--CcccccccCCcHHHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999999999 78889999999999999999994444443
No 52
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93 E-value=2.1e-26 Score=198.04 Aligned_cols=216 Identities=21% Similarity=0.304 Sum_probs=193.8
Q ss_pred ccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q 009183 11 STEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATD 90 (541)
Q Consensus 11 ~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~ 90 (541)
+..-.+..+.+.+..|...++.|+-.|+.+.++-+|.. +...|..+..+.+|+.+++...+.+.+..+.+. .+|..|
T Consensus 81 s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN-~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~D 157 (296)
T KOG0502|consen 81 SAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTN-GARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACD 157 (296)
T ss_pred hhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecc-cccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCcc
Confidence 34455666667777799999999999988888877764 888999999999999999999999888877765 578999
Q ss_pred CCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHh
Q 009183 91 NNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYK 170 (541)
Q Consensus 91 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~ 170 (541)
+.|.|||.||+..|++++|++|++.|+|++...+...++|.+|+..|..++|+.|+.+ +.++|..|.+|.|||-+|++-
T Consensus 158 e~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r-~vdVNvyDwNGgTpLlyAvrg 236 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTR-EVDVNVYDWNGGTPLLYAVRG 236 (296)
T ss_pred ccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc-CCCcceeccCCCceeeeeecC
Confidence 9999999999999999999999999999999999999999999999999999999987 999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHH
Q 009183 171 GFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQ 233 (541)
Q Consensus 171 ~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~ 233 (541)
++.++++.|++.|++++..|..|++++..|+..|+. +|+..+++.+ ....+|..-++|+|
T Consensus 237 nhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~--lkl~Q~~~~~~~~~ 296 (296)
T KOG0502|consen 237 NHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHA--LKLCQDSEKRTPLH 296 (296)
T ss_pred ChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHH--HHHhhcccCCCCCC
Confidence 999999999999999999999999999999999997 8888888765 55566776677653
No 53
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93 E-value=8.5e-25 Score=241.37 Aligned_cols=178 Identities=21% Similarity=0.223 Sum_probs=163.5
Q ss_pred CCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHc
Q 009183 57 DGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQY 136 (541)
Q Consensus 57 d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~ 136 (541)
+.++.++||.||..|+.++++.|+++|+++|..|..|.||||+|+..|+.++++.|+++|++++.+|.+|.||||.|+..
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~ 601 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA 601 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 009183 137 GQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAG 216 (541)
Q Consensus 137 g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 216 (541)
|+.++++.|++. +...+ ...+.++||.|+..|+.++++.|+++|++++.+|.+|.||||+|+..|+.+++++|+++|
T Consensus 602 g~~~iv~~L~~~-~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~G 678 (823)
T PLN03192 602 KHHKIFRILYHF-ASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNG 678 (823)
T ss_pred CCHHHHHHHHhc-CcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 999999999864 43333 345779999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCC-CCHHHHHHhcC
Q 009183 217 TKQELTAKDKAG-LTPTQLAYDKG 239 (541)
Q Consensus 217 ~~~~~~~~d~~g-~t~l~~A~~~~ 239 (541)
+ +++.+|..| .||++++....
T Consensus 679 A--dv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 679 A--DVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred C--CCCCCCCCCCCCHHHHHHHHH
Confidence 8 677788888 99998876543
No 54
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.92 E-value=4.4e-24 Score=235.73 Aligned_cols=179 Identities=19% Similarity=0.290 Sum_probs=165.1
Q ss_pred CCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHH
Q 009183 22 DNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAA 101 (541)
Q Consensus 22 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~ 101 (541)
.+....++|+.||..|+.+.++.+++. |.++|..|.+|.||||+||..|+.+++++|+++|++++.+|.+|.||||+|+
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~-G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~ 599 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKA-KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAI 599 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHH
Confidence 344567889999999999999999865 9999999999999999999999999999999999999999999999999999
Q ss_pred HhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHh
Q 009183 102 VRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLF 181 (541)
Q Consensus 102 ~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 181 (541)
..|+.+++++|++.++..+ ...+.++||.|+..|+.++++.|++. |++++.+|.+|.||||+|+..|+.+++++|++
T Consensus 600 ~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 600 SAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSEDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred HhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 9999999999999887654 34567999999999999999999976 99999999999999999999999999999999
Q ss_pred cCCCCCcccCCC-CcHHHHHHHcC
Q 009183 182 RDASQGRQDKDG-CTPLHWAALRG 204 (541)
Q Consensus 182 ~g~~~~~~d~~g-~tpLh~A~~~g 204 (541)
+|++++..|..| .||++.+....
T Consensus 677 ~GAdv~~~~~~g~~t~~~l~~~~~ 700 (823)
T PLN03192 677 NGADVDKANTDDDFSPTELRELLQ 700 (823)
T ss_pred cCCCCCCCCCCCCCCHHHHHHHHH
Confidence 999999999988 99998885543
No 55
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92 E-value=1.6e-24 Score=217.42 Aligned_cols=229 Identities=22% Similarity=0.265 Sum_probs=201.8
Q ss_pred CCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCch
Q 009183 16 PNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQT 95 (541)
Q Consensus 16 ~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~t 95 (541)
+.+...+|..+.|.||.|+.+|+.++++.|++ +.+-++..|..|.+|||+|+.+|+.+++|+++.++..+|..+..|.|
T Consensus 39 sds~n~qd~~gfTalhha~Lng~~~is~llle-~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~t 117 (854)
T KOG0507|consen 39 SDSHNLQDYSGFTLLHHAVLNGQNQISKLLLD-YEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENET 117 (854)
T ss_pred CccccccCccchhHHHHHHhcCchHHHHHHhc-chhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcC
Confidence 34556678899999999999999999987765 47788888899999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCC--------cccCCCCCCcHHHHH
Q 009183 96 ALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHAD--------YDASDNEGRSPLHWA 167 (541)
Q Consensus 96 pL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~--------~~~~d~~g~t~L~~A 167 (541)
|||.|++.|+.+++.+|+++|+|+-.+|+.+.|++-.|++.|..++++.|+++ ... -..++-.+.+|+|.|
T Consensus 118 plhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~-~~~~~~~~~~~~~~~~~~~~~plHla 196 (854)
T KOG0507|consen 118 PLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK-KFPVQSSLRVGDIKRPFPAIYPLHLA 196 (854)
T ss_pred ccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh-ccchhhcccCCCCCCCCCCcCCcchh
Confidence 99999999999999999999999999999999999999999999999999876 211 223456677999999
Q ss_pred HHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhc---CchHHH
Q 009183 168 AYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDK---GHRQVA 244 (541)
Q Consensus 168 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~---~~~~i~ 244 (541)
+++|+.++++.|++.|.++|.+...| |+||-|+..|..++|++|++.|. +...+|.+|+|+|++-... ...+++
T Consensus 197 akngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gi--n~h~~n~~~qtaldil~d~~~~~~~ei~ 273 (854)
T KOG0507|consen 197 AKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGI--NTHIKNQHGQTALDIIIDLQENRRYEIA 273 (854)
T ss_pred hhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhcc--ccccccccchHHHHHHHhcchhhhhhhh
Confidence 99999999999999999999887655 79999999999999999999997 7788999999999987654 344555
Q ss_pred HHHHH
Q 009183 245 LYLSN 249 (541)
Q Consensus 245 ~~L~~ 249 (541)
-++..
T Consensus 274 ga~~~ 278 (854)
T KOG0507|consen 274 GAVKN 278 (854)
T ss_pred hhhhc
Confidence 55544
No 56
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.91 E-value=1.8e-24 Score=210.17 Aligned_cols=206 Identities=33% Similarity=0.497 Sum_probs=182.0
Q ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHH
Q 009183 28 TDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIA 107 (541)
Q Consensus 28 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~ 107 (541)
-.+..|+..|+.+.++.++.. +.+++..+.+|.|+||-||...+.+||++|+++|++||..|..++||||.|+..|++.
T Consensus 42 a~~l~A~~~~d~~ev~~ll~~-ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 42 AVFLEACSRGDLEEVRKLLNR-GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHHHhccccccHHHHHHHhcc-CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHH
Confidence 347789999999999999976 6888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccccCCChHHHHHHHcCC--------------H-------------HHHHHHHHhcCCCcccCCCCC
Q 009183 108 VADVLVQNGARVEAADVHGYRAVHVAAQYGQ--------------T-------------SFLNHIVAKYHADYDASDNEG 160 (541)
Q Consensus 108 ~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~--------------~-------------~~v~~Ll~~~~~~~~~~d~~g 160 (541)
++++|+++|+++...+..|..|+..+...-. . ++-.++- .|...+..+..|
T Consensus 121 i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~--~G~~~d~~~~rG 198 (527)
T KOG0505|consen 121 IVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLN--AGAELDARHARG 198 (527)
T ss_pred HHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHh--cccccccccccc
Confidence 9999999999998888777766654421111 1 1122222 477888888889
Q ss_pred CcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhc
Q 009183 161 RSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDK 238 (541)
Q Consensus 161 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~ 238 (541)
.|.||.|+.+|..++.++|++.|.+++.+|.+|+||||.|+.-|+.+++++|+++|+ +++.+...|.||+++|.+.
T Consensus 199 ~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga--~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 199 ATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGA--DMDAKTKMGETPLDVADEE 274 (527)
T ss_pred chHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhc--ccchhhhcCCCCccchhhh
Confidence 999999999999999999999999999999999999999999999999999999998 7888999999999999764
No 57
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.91 E-value=3e-24 Score=215.60 Aligned_cols=222 Identities=24% Similarity=0.330 Sum_probs=199.5
Q ss_pred hhhHHHHHHcCCHHHHHHHHHhcC------------CCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCc
Q 009183 27 VTDVFSASAYGDFEKLRKFVEEDG------------ASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQ 94 (541)
Q Consensus 27 ~~~L~~A~~~g~~~~v~~ll~~~~------------~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~ 94 (541)
.+-+..|++.|+.+.+..+|+..+ ..+|..|.+|.|+||.|+.+|+.+++++|+++.+-++..+..|.
T Consensus 4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~ 83 (854)
T KOG0507|consen 4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGI 83 (854)
T ss_pred hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCc
Confidence 355889999999999999997532 45788899999999999999999999999999999999999999
Q ss_pred hHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHH
Q 009183 95 TALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFAD 174 (541)
Q Consensus 95 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~ 174 (541)
+|||+|+..|+.+++++++..+..++..+.+|.+|||.|++.||.+++.+|+.+ +.+.-..|.++.|+|..|++.|+.+
T Consensus 84 ~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~-~adp~i~nns~~t~ldlA~qfgr~~ 162 (854)
T KOG0507|consen 84 LPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKK-NADPFIRNNSKETVLDLASRFGRAE 162 (854)
T ss_pred ceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhc-CCCccccCcccccHHHHHHHhhhhH
Confidence 999999999999999999999999999999999999999999999999999976 9999999999999999999999999
Q ss_pred HHHHHHhcCCCC--------CcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHH
Q 009183 175 TIRLLLFRDASQ--------GRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALY 246 (541)
Q Consensus 175 ~v~~Ll~~g~~~--------~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~ 246 (541)
+++.|++...+. ..++-.+.+|||.|+++|+.++++.|+++|. +++.....| |+||.|+..|..+++.+
T Consensus 163 Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~--din~~t~~g-talheaalcgk~evvr~ 239 (854)
T KOG0507|consen 163 VVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF--DINYTTEDG-TALHEAALCGKAEVVRF 239 (854)
T ss_pred HHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC--Ccccccccc-hhhhhHhhcCcchhhhH
Confidence 999999763332 2344568899999999999999999999998 666555555 89999999999999999
Q ss_pred HHHhhh
Q 009183 247 LSNAQH 252 (541)
Q Consensus 247 L~~~~~ 252 (541)
|++.+.
T Consensus 240 ll~~gi 245 (854)
T KOG0507|consen 240 LLEIGI 245 (854)
T ss_pred HHhhcc
Confidence 987653
No 58
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.89 E-value=1.3e-22 Score=222.99 Aligned_cols=207 Identities=20% Similarity=0.201 Sum_probs=161.8
Q ss_pred CceEEeeccccC--CCCCCCCCCcchhhHH-HHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcC---cHHHHH
Q 009183 4 SEIEVVSSTEAI--PNENQNDNQAAVTDVF-SASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNN---FADIAQ 77 (541)
Q Consensus 4 ~~~~~~~~l~~~--~~~~~~~~~~~~~~L~-~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~---~~~iv~ 77 (541)
++++.++.+.+. ..+.+..|..|.|||| .|+.+++.++++.|++. +. .+..|.||||.|+.++ ..++++
T Consensus 28 g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~-g~----~~~~G~T~Lh~A~~~~~~~v~~ll~ 102 (743)
T TIGR00870 28 GDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNL-SC----RGAVGDTLLHAISLEYVDAVEAILL 102 (743)
T ss_pred CCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhC-CC----CCCcChHHHHHHHhccHHHHHHHHH
Confidence 455555555555 4555567788999999 77777777777766654 54 6788999999999732 234445
Q ss_pred HHHhCCCC------CCC----CCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccc--------------cCCChHHHHH
Q 009183 78 YIIDHGGD------VNA----TDNNGQTALHWAAVRGSIAVADVLVQNGARVEAAD--------------VHGYRAVHVA 133 (541)
Q Consensus 78 ~Ll~~g~~------~~~----~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d--------------~~g~t~l~~A 133 (541)
.+.+.+.+ ++. ....|.||||+|+..|+.++++.|+++|++++.++ ..|.+|||.|
T Consensus 103 ~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~A 182 (743)
T TIGR00870 103 HLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAA 182 (743)
T ss_pred HHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHH
Confidence 55544432 111 22469999999999999999999999999998753 2589999999
Q ss_pred HHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhC---------cHHHHHHHHhcCCCC-------CcccCCCCcHH
Q 009183 134 AQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKG---------FADTIRLLLFRDASQ-------GRQDKDGCTPL 197 (541)
Q Consensus 134 ~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~---------~~~~v~~Ll~~g~~~-------~~~d~~g~tpL 197 (541)
+..|+.++++.|++. |++++.+|..|.||||+|+..+ ..++.++++..++.. +..|.+|.|||
T Consensus 183 a~~~~~~iv~lLl~~-gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL 261 (743)
T TIGR00870 183 ACLGSPSIVALLSED-PADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPL 261 (743)
T ss_pred HHhCCHHHHHHHhcC-CcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCch
Confidence 999999999999976 8999999999999999999986 234566676665554 56788999999
Q ss_pred HHHHHcCCHHHHHHHHHcC
Q 009183 198 HWAALRGNVEACTVLVHAG 216 (541)
Q Consensus 198 h~A~~~g~~~~v~~Ll~~g 216 (541)
|+|+..|+.+++++|++.+
T Consensus 262 ~~A~~~g~~~l~~lLL~~~ 280 (743)
T TIGR00870 262 KLAAKEGRIVLFRLKLAIK 280 (743)
T ss_pred hhhhhcCCccHHHHHHHHH
Confidence 9999999999999999854
No 59
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89 E-value=2.5e-22 Score=178.03 Aligned_cols=145 Identities=16% Similarity=0.156 Sum_probs=98.9
Q ss_pred CCCCccCCCCCchHHHHHHHcCcH----HHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHH---HHHHHHhCCCCCCcc
Q 009183 50 GASVSRPDGNGYFALQWAALNNFA----DIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIA---VADVLVQNGARVEAA 122 (541)
Q Consensus 50 ~~~~~~~d~~g~t~Lh~A~~~~~~----~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~---~v~~Ll~~g~~~~~~ 122 (541)
+++++..+.++.++||.||..|+. +++++|.+.|++++.+|..|.||||+|+..|+.+ ++++|+++|++++.+
T Consensus 10 ~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~ 89 (166)
T PHA02743 10 NLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINAR 89 (166)
T ss_pred chHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCC
Confidence 455666666677777777777776 4555666777777777777777777777776643 366777777777776
Q ss_pred c-cCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCC
Q 009183 123 D-VHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGC 194 (541)
Q Consensus 123 d-~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 194 (541)
| ..|.||||+|+..|+.+++++|+.+.+++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 90 ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence 6 36777777777777777777666544666666676777777777777777777777777777666665543
No 60
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88 E-value=1.2e-22 Score=187.74 Aligned_cols=163 Identities=30% Similarity=0.464 Sum_probs=146.0
Q ss_pred CCCCCCCCchHHHHHHHhCCHHHHHHHHhCC-CCCCccccCCChHHHHHHHc-----CCHHHHHHHHHhcCCCcccC-CC
Q 009183 86 VNATDNNGQTALHWAAVRGSIAVADVLVQNG-ARVEAADVHGYRAVHVAAQY-----GQTSFLNHIVAKYHADYDAS-DN 158 (541)
Q Consensus 86 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~l~~A~~~-----g~~~~v~~Ll~~~~~~~~~~-d~ 158 (541)
+|..|.+|+|+||||+..+|.++|+.|++.| ++++..++.|+||+++|+.. .+.++|..|... .++|.+ ..
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~m--gnVNaKAsQ 338 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKM--GDVNAKASQ 338 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhc--cCcchhhhh
Confidence 6888999999999999999999999999998 89999999999999998752 345778888864 455655 45
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhc
Q 009183 159 EGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDK 238 (541)
Q Consensus 159 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~ 238 (541)
.|+|+||+|+..|+.++|+.|+.-|+|+|.+|.+|.|+|+.|+.+|+.|++++||.... .+....|.+|.|+|.+|.+.
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~-cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPS-CDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCc-ccceeecCCCchhhhhHHhc
Confidence 68999999999999999999999999999999999999999999999999999997654 58889999999999999999
Q ss_pred CchHHHHHHHHhh
Q 009183 239 GHRQVALYLSNAQ 251 (541)
Q Consensus 239 ~~~~i~~~L~~~~ 251 (541)
||.||.-+|-.+-
T Consensus 418 gh~eIa~mlYa~~ 430 (452)
T KOG0514|consen 418 GHREIAVMLYAHM 430 (452)
T ss_pred CchHHHHHHHHHH
Confidence 9999998885543
No 61
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87 E-value=1.4e-21 Score=173.15 Aligned_cols=146 Identities=21% Similarity=0.226 Sum_probs=128.0
Q ss_pred CCCCCCCCCCCCchHHHHHHHhCCH----HHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHH---HHHHHHhcCCCcc
Q 009183 82 HGGDVNATDNNGQTALHWAAVRGSI----AVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSF---LNHIVAKYHADYD 154 (541)
Q Consensus 82 ~g~~~~~~~~~g~tpL~~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~---v~~Ll~~~~~~~~ 154 (541)
+|++++..+.++.+++|.||+.|+. ++++.|.+.|++++.+|..|.||||+|+..|+.+. +++|++. |++++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~-Gadin 87 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNM-GADIN 87 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHc-CCCCC
Confidence 5677777888889999999999998 66778888999999999999999999999988654 6778765 89999
Q ss_pred cCC-CCCCcHHHHHHHhCcHHHHHHHHh-cCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCC
Q 009183 155 ASD-NEGRSPLHWAAYKGFADTIRLLLF-RDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLT 230 (541)
Q Consensus 155 ~~d-~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t 230 (541)
.+| ..|.||||+|+..++.+++++|+. .|++++.+|..|.||||+|+..++.+++++|+++|+ +.+.++..|.+
T Consensus 88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga--~~~~~~~~~~~ 163 (166)
T PHA02743 88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGA--VCDDPLSIGLS 163 (166)
T ss_pred CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CCCCcccCCcc
Confidence 998 589999999999999999999995 799999999999999999999999999999999998 66667766653
No 62
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=9.1e-22 Score=181.88 Aligned_cols=162 Identities=29% Similarity=0.408 Sum_probs=144.8
Q ss_pred CCccCCCCCchHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCchHHHHHHHh-----CCHHHHHHHHhCCCCCCccc-c
Q 009183 52 SVSRPDGNGYFALQWAALNNFADIAQYIIDHG-GDVNATDNNGQTALHWAAVR-----GSIAVADVLVQNGARVEAAD-V 124 (541)
Q Consensus 52 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~g~tpL~~A~~~-----g~~~~v~~Ll~~g~~~~~~d-~ 124 (541)
-+|..|.+|+|+||||+.+.++++|+.|++.| +++|..+..|+||+++|+.. .+.++|+.|.+.| |+|++- .
T Consensus 260 vVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ 338 (452)
T KOG0514|consen 260 VVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQ 338 (452)
T ss_pred HhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhh
Confidence 46778999999999999999999999999887 58999999999999998864 4688999999886 666654 5
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhc-CCCCCcccCCCCcHHHHHHHc
Q 009183 125 HGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFR-DASQGRQDKDGCTPLHWAALR 203 (541)
Q Consensus 125 ~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~ 203 (541)
.|+|+|++|+.+|+.++|+.|+. +|+++|.+|.+|.|+||.||..|+.+++++|+.. ++|...+|.+|.|+|.+|...
T Consensus 339 ~gQTALMLAVSHGr~d~vk~LLa-cgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 339 HGQTALMLAVSHGRVDMVKALLA-CGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred hcchhhhhhhhcCcHHHHHHHHH-ccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhc
Confidence 79999999999999999999996 4999999999999999999999999999999975 789999999999999999999
Q ss_pred CCHHHHHHHHHc
Q 009183 204 GNVEACTVLVHA 215 (541)
Q Consensus 204 g~~~~v~~Ll~~ 215 (541)
|+.||.-+|-.+
T Consensus 418 gh~eIa~mlYa~ 429 (452)
T KOG0514|consen 418 GHREIAVMLYAH 429 (452)
T ss_pred CchHHHHHHHHH
Confidence 999998777543
No 63
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.86 E-value=2.2e-21 Score=161.03 Aligned_cols=147 Identities=22% Similarity=0.276 Sum_probs=133.0
Q ss_pred cchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhC
Q 009183 25 AAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRG 104 (541)
Q Consensus 25 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g 104 (541)
+....+..|+..+.+..|+.||++....+|.+|.+|+||||.|+.+|+.+||+.|+.+|++++++...|+||||-||.=.
T Consensus 62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN 141 (228)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc
Confidence 34456789999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCH-HHHHHHHHhcCCCcccCCCCCCcHHHHHHHhC
Q 009183 105 SIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQT-SFLNHIVAKYHADYDASDNEGRSPLHWAAYKG 171 (541)
Q Consensus 105 ~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~-~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~ 171 (541)
+.+++..|+++|+|+++......||||.|+...+. ..+.+|+...++.+-.++..+.||+..|-+.+
T Consensus 142 N~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 142 NFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred chhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence 99999999999999999999999999999986654 56777777767888888888899999987765
No 64
>PHA02741 hypothetical protein; Provisional
Probab=99.86 E-value=5.9e-21 Score=170.10 Aligned_cols=130 Identities=23% Similarity=0.296 Sum_probs=78.6
Q ss_pred ccCCCCCchHHHHHHHcCcHHHHHHHHh------CCCCCCCCCCCCchHHHHHHHhCC----HHHHHHHHhCCCCCCccc
Q 009183 54 SRPDGNGYFALQWAALNNFADIAQYIID------HGGDVNATDNNGQTALHWAAVRGS----IAVADVLVQNGARVEAAD 123 (541)
Q Consensus 54 ~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~------~g~~~~~~~~~g~tpL~~A~~~g~----~~~v~~Ll~~g~~~~~~d 123 (541)
+.+|..|.||||+|+..|+.++++.|+. .|++++.+|..|.||||+|+..|+ .+++++|++.|++++.++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~ 94 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE 94 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence 4456667777777777777777776642 245566666666666666666666 355666666666666555
Q ss_pred c-CCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcC
Q 009183 124 V-HGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRD 183 (541)
Q Consensus 124 ~-~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 183 (541)
. .|.||||+|+..++.+++++|+...+++++.+|..|.||||.|+..++.+++++|++.+
T Consensus 95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 95 MLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred cCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 3 56666666666666666665554335555555555555555555555555555555543
No 65
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86 E-value=1.5e-20 Score=179.36 Aligned_cols=155 Identities=17% Similarity=0.122 Sum_probs=132.3
Q ss_pred ccCCCCCch-HHHHHHHcCcHHHHHHHHhCCCCCCCCC----CCCchHHHHHHHhCCHHHHHHHHhCCCCCCcc-ccCCC
Q 009183 54 SRPDGNGYF-ALQWAALNNFADIAQYIIDHGGDVNATD----NNGQTALHWAAVRGSIAVADVLVQNGARVEAA-DVHGY 127 (541)
Q Consensus 54 ~~~d~~g~t-~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~----~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~-d~~g~ 127 (541)
..+|..|.| +||.|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++|+++|++++.+ +..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 445667765 5677777899999999999999999874 58999999999999999999999999999986 46799
Q ss_pred hHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHH
Q 009183 128 RAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVE 207 (541)
Q Consensus 128 t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~ 207 (541)
||||.|+..|+.+++++|+.. |++++.+|..|.||||+|+..++.+++..+. |. ..+..+.+|++.+ ++.+
T Consensus 106 TpLh~Aa~~~~~eivklLL~~-GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~---~n~e 176 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSY-GADINIQTNDMVTPIELALMICNNFLAFMIC--DN---EISNFYKHPKKIL---INFD 176 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC---cccccccChhhhh---ccHH
Confidence 999999999999999999976 9999999999999999999988888776554 32 2456678898875 4789
Q ss_pred HHHHHHHcCC
Q 009183 208 ACTVLVHAGT 217 (541)
Q Consensus 208 ~v~~Ll~~g~ 217 (541)
+++.|+.++.
T Consensus 177 i~~~Lish~v 186 (300)
T PHA02884 177 ILKILVSHFI 186 (300)
T ss_pred HHHHHHHHHH
Confidence 9999998875
No 66
>PHA02741 hypothetical protein; Provisional
Probab=99.84 E-value=4.7e-20 Score=164.30 Aligned_cols=129 Identities=26% Similarity=0.271 Sum_probs=77.5
Q ss_pred cccCCChHHHHHHHcCCHHHHHHHHHh-----cCCCcccCCCCCCcHHHHHHHhCc----HHHHHHHHhcCCCCCcccC-
Q 009183 122 ADVHGYRAVHVAAQYGQTSFLNHIVAK-----YHADYDASDNEGRSPLHWAAYKGF----ADTIRLLLFRDASQGRQDK- 191 (541)
Q Consensus 122 ~d~~g~t~l~~A~~~g~~~~v~~Ll~~-----~~~~~~~~d~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~d~- 191 (541)
+|..|.||||.|+..|+.++++.|+.. .+.+++.+|..|.||||+|+..|+ .+++++|+++|++++.++.
T Consensus 17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~ 96 (169)
T PHA02741 17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML 96 (169)
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence 344455555555555555555544321 134555566666666666666665 3566666666666666664
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhh
Q 009183 192 DGCTPLHWAALRGNVEACTVLVH-AGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQH 252 (541)
Q Consensus 192 ~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~ 252 (541)
+|.||||+|+..++.+++++|+. .|+ +++.+|.+|.|||++|...++.+++++|.+..+
T Consensus 97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~--~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~ 156 (169)
T PHA02741 97 EGDTALHLAAHRRDHDLAEWLCCQPGI--DLHFCNADNKSPFELAIDNEDVAMMQILREIVA 156 (169)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCC--CCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence 56667776666666666666665 354 555666666667776666666666666666543
No 67
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.83 E-value=2e-21 Score=200.81 Aligned_cols=225 Identities=26% Similarity=0.335 Sum_probs=142.3
Q ss_pred cchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCchHHHHHHHh
Q 009183 25 AAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNAT-DNNGQTALHWAAVR 103 (541)
Q Consensus 25 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~-~~~g~tpL~~A~~~ 103 (541)
...++|-.|++.|+.|.+..++.+ |+++.-+|+.|.+||.+|+..||..+|+.|+++.++++.. |..+.|+|-+||..
T Consensus 756 n~~t~LT~acaggh~e~vellv~r-ganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsg 834 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLVVR-GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSG 834 (2131)
T ss_pred cccccccccccCccHHHHHHHHHh-cccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCC
Confidence 345666666666666666655544 6666666666666666666666666666666666666654 34566666666666
Q ss_pred CCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccC--CCCCCcHHHHHHHhCcHHHHHHHHh
Q 009183 104 GSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDAS--DNEGRSPLHWAAYKGFADTIRLLLF 181 (541)
Q Consensus 104 g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~--d~~g~t~L~~A~~~~~~~~v~~Ll~ 181 (541)
|+.+++++|+..|++-..++...+|||.+|...|..+++..|+.. |..++.+ .+.|-+||+.|...|+...++.|++
T Consensus 835 gr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~-GseInSrtgSklgisPLmlatmngh~~at~~ll~ 913 (2131)
T KOG4369|consen 835 GRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSS-GSEINSRTGSKLGISPLMLATMNGHQAATLSLLQ 913 (2131)
T ss_pred CcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhc-ccccccccccccCcchhhhhhhccccHHHHHHhc
Confidence 666666666666666666666666666666666666666666654 5555444 3445566666666666666666666
Q ss_pred cCCCCCcc-cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhhh
Q 009183 182 RDASQGRQ-DKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQHM 253 (541)
Q Consensus 182 ~g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~~ 253 (541)
.|.|+|.+ ..+-+|+|-+|+..|+.+++.+||.+.+ +...+-+.|.|||+-++..|..|+-.+|+.++++
T Consensus 914 ~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~a--nvehRaktgltplme~AsgGyvdvg~~li~~gad 984 (2131)
T KOG4369|consen 914 PGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQA--NVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGAD 984 (2131)
T ss_pred ccchhccccccccccceeeccccCcchHHHHHHHHhh--hhhhhcccCCcccchhhcCCccccchhhhhcccc
Confidence 66666643 2234566666666666666666666554 4455555666666666666666666666665554
No 68
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.83 E-value=2.8e-20 Score=163.45 Aligned_cols=95 Identities=15% Similarity=0.229 Sum_probs=38.7
Q ss_pred CCCCchHHHHHHHhCCH---HHHHHHHhCCCCCCccc-cCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHH
Q 009183 90 DNNGQTALHWAAVRGSI---AVADVLVQNGARVEAAD-VHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLH 165 (541)
Q Consensus 90 ~~~g~tpL~~A~~~g~~---~~v~~Ll~~g~~~~~~d-~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~ 165 (541)
|.+|.||||+|+..|+. +++++|++.|++++.+| ..|.||||+|+..|+.+++++|+.+.+++++.+|..|.||||
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYY 131 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHH
Confidence 33444444444444433 23344444444444443 234444444444444444444433223333333444444444
Q ss_pred HHHHhCcHHHHHHHHhcCC
Q 009183 166 WAAYKGFADTIRLLLFRDA 184 (541)
Q Consensus 166 ~A~~~~~~~~v~~Ll~~g~ 184 (541)
+|+..|+.+++++|+++|+
T Consensus 132 ~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 132 VACERHDAKMMNILRAKGA 150 (154)
T ss_pred HHHHcCCHHHHHHHHHcCC
Confidence 4444444444444443333
No 69
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82 E-value=2.8e-19 Score=170.67 Aligned_cols=156 Identities=15% Similarity=0.092 Sum_probs=134.3
Q ss_pred CCCCCCCCch-HHHHHHHhCCHHHHHHHHhCCCCCCccc----cCCChHHHHHHHcCCHHHHHHHHHhcCCCcccC-CCC
Q 009183 86 VNATDNNGQT-ALHWAAVRGSIAVADVLVQNGARVEAAD----VHGYRAVHVAAQYGQTSFLNHIVAKYHADYDAS-DNE 159 (541)
Q Consensus 86 ~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~g~~~~~~d----~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~-d~~ 159 (541)
+..+|..+.| +||.|+..|+.+++++|+++|++++.++ ..|.||||+|+..++.+++++|++. |++++.+ +..
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~-GADVN~~~~~~ 103 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY-GADVNRYAEEA 103 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcCcccCCC
Confidence 3456666655 6677788899999999999999999874 5899999999999999999999976 9999986 467
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC
Q 009183 160 GRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKG 239 (541)
Q Consensus 160 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~ 239 (541)
|.||||.|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++..+. |. ..+..+.+|..++ +
T Consensus 104 g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~---~ 173 (300)
T PHA02884 104 KITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DN-----EISNFYKHPKKIL---I 173 (300)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC-----cccccccChhhhh---c
Confidence 999999999999999999999999999999999999999999999998876654 32 2466778888876 4
Q ss_pred chHHHHHHHHhhh
Q 009183 240 HRQVALYLSNAQH 252 (541)
Q Consensus 240 ~~~i~~~L~~~~~ 252 (541)
+.+++++|.++..
T Consensus 174 n~ei~~~Lish~v 186 (300)
T PHA02884 174 NFDILKILVSHFI 186 (300)
T ss_pred cHHHHHHHHHHHH
Confidence 6789999888765
No 70
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.82 E-value=4.2e-19 Score=181.33 Aligned_cols=214 Identities=23% Similarity=0.314 Sum_probs=170.3
Q ss_pred hhHHHHHHcCCHHHHHHHHHhc--------CCCCccCCCCCchHHHHHHHc---CcHHHHHHHHhCCCC-CCC----CCC
Q 009183 28 TDVFSASAYGDFEKLRKFVEED--------GASVSRPDGNGYFALQWAALN---NFADIAQYIIDHGGD-VNA----TDN 91 (541)
Q Consensus 28 ~~L~~A~~~g~~~~v~~ll~~~--------~~~~~~~d~~g~t~Lh~A~~~---~~~~iv~~Ll~~g~~-~~~----~~~ 91 (541)
.++..|...+..+.+..++... ..+++.+...|.|+||.|..+ ++-++++.|++.-.+ +|. ...
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY 182 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY 182 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence 6788999999998888877653 267888899999999999984 456899999986432 221 123
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhC
Q 009183 92 NGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKG 171 (541)
Q Consensus 92 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~ 171 (541)
.|+||||+|+.+.+.++|++|++.|||++++-... ...+-. ++. .+ + ..++.-.-..|..||.+||..+
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~---FF~~~d-qk~--~r----k-~T~Y~G~~YfGEyPLSfAAC~n 251 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGA---FFCPDD-QKA--SR----K-STNYTGYFYFGEYPLSFAACTN 251 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcc---ccCccc-ccc--cc----c-ccCCcceeeeccCchHHHHHcC
Confidence 69999999999999999999999999997653210 000000 000 00 1 2223333456889999999999
Q ss_pred cHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhh
Q 009183 172 FADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQ 251 (541)
Q Consensus 172 ~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~ 251 (541)
+.+++++|+++|+|++.+|..|+|.||.-+..-..++.+.++++|++.....+|++|.|||.+|+..|+.+|.+.+++..
T Consensus 252 q~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~ 331 (782)
T KOG3676|consen 252 QPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILERR 331 (782)
T ss_pred CHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999996447889999999999999999999999999875
Q ss_pred h
Q 009183 252 H 252 (541)
Q Consensus 252 ~ 252 (541)
.
T Consensus 332 k 332 (782)
T KOG3676|consen 332 K 332 (782)
T ss_pred c
Confidence 3
No 71
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81 E-value=1.1e-19 Score=159.64 Aligned_cols=128 Identities=23% Similarity=0.293 Sum_probs=81.5
Q ss_pred CCCCCCchHHHHHHHhCCHHHHHHHHhCCC--C-----CCccccCCChHHHHHHHcCCHH---HHHHHHHhcCCCcccCC
Q 009183 88 ATDNNGQTALHWAAVRGSIAVADVLVQNGA--R-----VEAADVHGYRAVHVAAQYGQTS---FLNHIVAKYHADYDASD 157 (541)
Q Consensus 88 ~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~--~-----~~~~d~~g~t~l~~A~~~g~~~---~v~~Ll~~~~~~~~~~d 157 (541)
.+|.+|.||||+|++.|+. ++++...+. + +..+|..|.||||+|+..|+.+ +++.|++. |++++.+|
T Consensus 12 ~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~~~ 88 (154)
T PHA02736 12 EPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADINGKE 88 (154)
T ss_pred hcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHc-CCCccccC
Confidence 3445566666666666652 222222111 1 1234667777777777777653 45556654 67777776
Q ss_pred -CCCCcHHHHHHHhCcHHHHHHHHh-cCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 009183 158 -NEGRSPLHWAAYKGFADTIRLLLF-RDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTK 218 (541)
Q Consensus 158 -~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 218 (541)
..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 89 RVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred CCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 367777777777777777777776 4777777777777777777777777777777777763
No 72
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.81 E-value=2.3e-20 Score=193.02 Aligned_cols=249 Identities=17% Similarity=0.237 Sum_probs=223.4
Q ss_pred CCceEEeeccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhC
Q 009183 3 SSEIEVVSSTEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDH 82 (541)
Q Consensus 3 ~~~~~~~~~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~ 82 (541)
.++.|+..-+...+.+...++..|.+||+.|+-.|+..+|+.|+..+-..-...|..+.|+|-+||..|+.++|++|+..
T Consensus 767 ggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~ 846 (2131)
T KOG4369|consen 767 GGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNA 846 (2131)
T ss_pred CccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHh
Confidence 35566666777778899999999999999999999999999999764433445688999999999999999999999999
Q ss_pred CCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccc--cCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCC-CC
Q 009183 83 GGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAAD--VHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASD-NE 159 (541)
Q Consensus 83 g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d--~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d-~~ 159 (541)
|++-..++-..+|||-.|...|.+++++.|+.+|+.++.+. +-|..||..|.++||.+.++.|++. |.++|..- .+
T Consensus 847 gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~-gsdiNaqIeTN 925 (2131)
T KOG4369|consen 847 GANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP-GSDINAQIETN 925 (2131)
T ss_pred hccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc-cchhccccccc
Confidence 99999999889999999999999999999999999998876 5688999999999999999999987 88888654 34
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC
Q 009183 160 GRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKG 239 (541)
Q Consensus 160 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~ 239 (541)
-+|+|-+|+..|+.+++.+|+.+.+++..+-..|.|||+-++..|..|+-++|+.+|++.+....-....|+|.+++..|
T Consensus 926 rnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kG 1005 (2131)
T KOG4369|consen 926 RNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKG 1005 (2131)
T ss_pred cccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCC
Confidence 57999999999999999999999999999999999999999999999999999999998777777777789999999999
Q ss_pred chHHHHHHHHhhh
Q 009183 240 HRQVALYLSNAQH 252 (541)
Q Consensus 240 ~~~i~~~L~~~~~ 252 (541)
|...+..|++..+
T Consensus 1006 h~kfv~~lln~~a 1018 (2131)
T KOG4369|consen 1006 HTKFVPKLLNGDA 1018 (2131)
T ss_pred chhhhHHhhCCcc
Confidence 9999999987544
No 73
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.80 E-value=8.9e-19 Score=145.66 Aligned_cols=142 Identities=27% Similarity=0.317 Sum_probs=101.0
Q ss_pred HHHHHHHhCCHHHHHHHHhCCCC-CCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHH
Q 009183 96 ALHWAAVRGSIAVADVLVQNGAR-VEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFAD 174 (541)
Q Consensus 96 pL~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~ 174 (541)
-+.+|+..+.+..|+.|++..++ +|.+|..|+||||-|+.+|+.++++.|+.. |++.+.+...|.||||.||.-++.+
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~T~~GWTPLhSAckWnN~~ 144 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAKTNEGWTPLHSACKWNNFE 144 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHc-cCCcccccccCccchhhhhcccchh
Confidence 34567777777777777665543 567777777777777777777777777754 7777777777777777777777788
Q ss_pred HHHHHHhcCCCCCcccCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcC
Q 009183 175 TIRLLLFRDASQGRQDKDGCTPLHWAALRGNV-EACTVLVHAGTKQELTAKDKAGLTPTQLAYDKG 239 (541)
Q Consensus 175 ~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~ 239 (541)
++..|+++|+|+|.+.....||||.|+...+. ..+.+|+.... .....++..+.||+++|.+.+
T Consensus 145 va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dry-i~pg~~nn~eeta~~iARRT~ 209 (228)
T KOG0512|consen 145 VAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRY-IHPGLKNNLEETAFDIARRTS 209 (228)
T ss_pred HHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccc-cChhhhcCccchHHHHHHHhh
Confidence 88888888888888877788888888876554 44555554322 355667778888888887664
No 74
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.79 E-value=1.4e-19 Score=176.30 Aligned_cols=191 Identities=28% Similarity=0.369 Sum_probs=162.3
Q ss_pred ccccCCCCCCCCCCcchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q 009183 11 STEAIPNENQNDNQAAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATD 90 (541)
Q Consensus 11 ~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~ 90 (541)
.+.......+..+.+|.|+||.++...+.++|+.+++. ++++|..|.+|+||||.|+..|+.+++++|+++|+++...+
T Consensus 58 ~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~-ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avN 136 (527)
T KOG0505|consen 58 KLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVEN-GANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVN 136 (527)
T ss_pred HHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHh-cCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhcc
Confidence 33444455577888999999999999999999998875 99999999999999999999999999999999999987777
Q ss_pred CCCchHHHHHHH-------------hC-CH------------HHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHH
Q 009183 91 NNGQTALHWAAV-------------RG-SI------------AVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNH 144 (541)
Q Consensus 91 ~~g~tpL~~A~~-------------~g-~~------------~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~ 144 (541)
.+|..|+..|-. .| .+ +=++..+..|.+.+.++..|-|.||.|+.+|..++.+.
T Consensus 137 sdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~l 216 (527)
T KOG0505|consen 137 SDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAAL 216 (527)
T ss_pred CCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHH
Confidence 666666533221 11 11 11223344788999999889999999999999999999
Q ss_pred HHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHc
Q 009183 145 IVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALR 203 (541)
Q Consensus 145 Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~ 203 (541)
|++. +.+++.+|.+|.||||.|+.-|..++.++|+++|++++.....|.||+..|...
T Consensus 217 Ll~a-g~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee 274 (527)
T KOG0505|consen 217 LLQA-GYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE 274 (527)
T ss_pred HHHh-ccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence 9876 999999999999999999999999999999999999999999999999998753
No 75
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.77 E-value=4.5e-19 Score=159.04 Aligned_cols=159 Identities=23% Similarity=0.381 Sum_probs=137.0
Q ss_pred hHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHH
Q 009183 29 DVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAV 108 (541)
Q Consensus 29 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~ 108 (541)
.++.-++.||.-.|+..|++...|.|.-|..|.+||||||+.|+..+++.|+++|+.+|..+....||||+|+..|+-++
T Consensus 3 dif~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdi 82 (448)
T KOG0195|consen 3 DIFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDI 82 (448)
T ss_pred hhhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHH
Confidence 35566777887778888888889999999999999999999999999999999999999998888999999999999999
Q ss_pred HHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCc
Q 009183 109 ADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGR 188 (541)
Q Consensus 109 v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 188 (541)
|+.|++..+|+|+.+..|.||||+||.-|...+.+-|+.. |+.++..+++|.|||..|--.-..-+.+..-++|-+++.
T Consensus 83 vqkll~~kadvnavnehgntplhyacfwgydqiaedli~~-ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 83 VQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISC-GAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred HHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhc-cceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999999999999999999999989875 999999999999999887543333333344456766653
No 76
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.72 E-value=8.4e-18 Score=150.97 Aligned_cols=123 Identities=31% Similarity=0.562 Sum_probs=113.0
Q ss_pred HHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCC
Q 009183 79 IIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDN 158 (541)
Q Consensus 79 Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~ 158 (541)
|-+.--|.|..|..|.+||||||+.|+..+++.|+++|+.+|..+....||||+|+.+||.++|+.|++. .+++|..+.
T Consensus 20 ld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~-kadvnavne 98 (448)
T KOG0195|consen 20 LDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSR-KADVNAVNE 98 (448)
T ss_pred ecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHH-hcccchhhc
Confidence 3344557788888999999999999999999999999999999999999999999999999999999976 899999999
Q ss_pred CCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHH
Q 009183 159 EGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAAL 202 (541)
Q Consensus 159 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~ 202 (541)
.|.||||+||.-|...+.+-|+..|+.++..+++|.|||..|--
T Consensus 99 hgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp 142 (448)
T KOG0195|consen 99 HGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKP 142 (448)
T ss_pred cCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhch
Confidence 99999999999999999999999999999999999999988743
No 77
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.71 E-value=7.9e-17 Score=127.29 Aligned_cols=89 Identities=35% Similarity=0.632 Sum_probs=58.8
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHH
Q 009183 30 VFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVA 109 (541)
Q Consensus 30 L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v 109 (541)
||.|++.|+.+.++.+++. +.+++. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++
T Consensus 1 L~~A~~~~~~~~~~~ll~~-~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 75 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-GADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV 75 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-TSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHC-cCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence 5667777777777777663 555544 66677777777777777777777777777666677777777777777777
Q ss_pred HHHHhCCCCCCccc
Q 009183 110 DVLVQNGARVEAAD 123 (541)
Q Consensus 110 ~~Ll~~g~~~~~~d 123 (541)
++|+++|++++.+|
T Consensus 76 ~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 76 KLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHTTT-TTSS-
T ss_pred HHHHHcCCCCCCcC
Confidence 77777777666554
No 78
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.70 E-value=3.7e-16 Score=131.83 Aligned_cols=122 Identities=37% Similarity=0.648 Sum_probs=68.0
Q ss_pred CCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHc
Q 009183 57 DGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQY 136 (541)
Q Consensus 57 d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~ 136 (541)
|.+|.||||.|+..++.+++++|++++.+.+..+..|.||+|.|+..++.++++.|++.|++++..+..|.||+|.|+..
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~ 83 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARN 83 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 44566666666666666666666666655555555566666666666666666666666555555555555555555555
Q ss_pred CCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHH
Q 009183 137 GQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLL 179 (541)
Q Consensus 137 g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 179 (541)
++.+++++|+++ +.+.+..|..+.||++.|...++.+++++|
T Consensus 84 ~~~~~~~~L~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 84 GNLDVVKLLLKH-GADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred CcHHHHHHHHHc-CCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 555555555543 344444444444555555554444444443
No 79
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69 E-value=6.8e-16 Score=130.17 Aligned_cols=122 Identities=42% Similarity=0.661 Sum_probs=79.5
Q ss_pred CCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHH
Q 009183 90 DNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAY 169 (541)
Q Consensus 90 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~ 169 (541)
+.+|.||||.|+..|+.++++.|++.+.+.+.++..|.+|+|.|+..+..++++.|++. +..++..+..+.||+|+|+.
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~l~~a~~ 82 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEK-GADVNARDKDGNTPLHLAAR 82 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCCHHHHHHH
Confidence 45566777777777777777777776666666666666666666666666666666654 44555556666666666666
Q ss_pred hCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHH
Q 009183 170 KGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVL 212 (541)
Q Consensus 170 ~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~L 212 (541)
.++.+++++|++++.+.+..+..|.||++.|+..++.+++++|
T Consensus 83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 6666666666666666666666666666666666666666655
No 80
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.69 E-value=2.2e-16 Score=124.73 Aligned_cols=89 Identities=33% Similarity=0.599 Sum_probs=63.6
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHH
Q 009183 64 LQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLN 143 (541)
Q Consensus 64 Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~ 143 (541)
||+|+..|+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.++++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~ 76 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK 76 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence 5777777777777777777766655 667777777777777777777777777777777777777777777777777
Q ss_pred HHHHhcCCCcccCC
Q 009183 144 HIVAKYHADYDASD 157 (541)
Q Consensus 144 ~Ll~~~~~~~~~~d 157 (541)
+|++. |++++.+|
T Consensus 77 ~Ll~~-g~~~~~~n 89 (89)
T PF12796_consen 77 LLLEH-GADVNIRN 89 (89)
T ss_dssp HHHHT-TT-TTSS-
T ss_pred HHHHc-CCCCCCcC
Confidence 77765 66666553
No 81
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.68 E-value=7.5e-16 Score=157.81 Aligned_cols=163 Identities=23% Similarity=0.253 Sum_probs=133.5
Q ss_pred CCCCCCcchhhHHHHHH---cCCHHHHHHHHHhcCCCCccC----CCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCC-
Q 009183 19 NQNDNQAAVTDVFSASA---YGDFEKLRKFVEEDGASVSRP----DGNGYFALQWAALNNFADIAQYIIDHGGDVNATD- 90 (541)
Q Consensus 19 ~~~~~~~~~~~L~~A~~---~g~~~~v~~ll~~~~~~~~~~----d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~- 90 (541)
.+.+...|+|.||.|.- .+.-+.++.|++-.+.-+|.. ...|.||||+|+.+.+.++|++|++.||||+++-
T Consensus 136 ~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~ 215 (782)
T KOG3676|consen 136 LNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARAC 215 (782)
T ss_pred cccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhh
Confidence 34457789999999987 345588889998777655543 3479999999999999999999999999987631
Q ss_pred ----------------------CCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHh
Q 009183 91 ----------------------NNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAK 148 (541)
Q Consensus 91 ----------------------~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~ 148 (541)
.-|..||-+||.-++.+++++|+++|||++++|.+|+|.||..+..-..+|..++++.
T Consensus 216 G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ 295 (782)
T KOG3676|consen 216 GAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALEL 295 (782)
T ss_pred ccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhc
Confidence 1267888888888888888888888888888888888888888888777888888865
Q ss_pred cCCC--cccCCCCCCcHHHHHHHhCcHHHHHHHHhc
Q 009183 149 YHAD--YDASDNEGRSPLHWAAYKGFADTIRLLLFR 182 (541)
Q Consensus 149 ~~~~--~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 182 (541)
+++ ...++.+|-|||..||..|+.++.+.+++.
T Consensus 296 -ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 296 -GANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred -CCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 666 667788888888888888888888888876
No 82
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.59 E-value=5.2e-15 Score=109.94 Aligned_cols=103 Identities=24% Similarity=0.329 Sum_probs=90.9
Q ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHH
Q 009183 28 TDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIA 107 (541)
Q Consensus 28 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~ 107 (541)
-.+..++++|.++.|++.+.+ +.++|..- .|.+|||+|+-.|+.+++++|+..|++++.+|+.|-|||..|+..||.+
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~-g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~ 81 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNE-GLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRD 81 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHc-cccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHH
Confidence 457788999999999999887 57787664 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCccccCCChHHHH
Q 009183 108 VADVLVQNGARVEAADVHGYRAVHV 132 (541)
Q Consensus 108 ~v~~Ll~~g~~~~~~d~~g~t~l~~ 132 (541)
+|++|+++|+|-..+..+|.+.+..
T Consensus 82 cVklLL~~GAdrt~~~PdG~~~~ea 106 (117)
T KOG4214|consen 82 CVKLLLQNGADRTIHAPDGTALIEA 106 (117)
T ss_pred HHHHHHHcCcccceeCCCchhHHhh
Confidence 9999999999988888888665543
No 83
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.52 E-value=2.2e-13 Score=127.83 Aligned_cols=127 Identities=34% Similarity=0.518 Sum_probs=86.5
Q ss_pred CCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCC-----HHHHHHHHHhcCC---CcccCCCCC
Q 009183 89 TDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQ-----TSFLNHIVAKYHA---DYDASDNEG 160 (541)
Q Consensus 89 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~-----~~~v~~Ll~~~~~---~~~~~d~~g 160 (541)
.+..+.++++.++..+..++++.++..|++++.+|..|.||+|.|+..++ .++++.|++. +. ..+.+|..|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~-g~~~~~~~~~~~~g 147 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEA-GADLDVNNLRDEDG 147 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHc-CCCCCCccccCCCC
Confidence 34445666666666666666666666666666666666666666666666 6666666665 44 455557777
Q ss_pred CcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 009183 161 RSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAG 216 (541)
Q Consensus 161 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g 216 (541)
.||||+|+..|+.++++.|++.|++++..+..|.|++++|+..++.++++.+++.+
T Consensus 148 ~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 148 NTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 77777777777777777777777777777777777777777777777777777643
No 84
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.52 E-value=4.3e-14 Score=105.10 Aligned_cols=103 Identities=24% Similarity=0.340 Sum_probs=74.7
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHH
Q 009183 129 AVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEA 208 (541)
Q Consensus 129 ~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~ 208 (541)
.+.+++++|..+-|+..... +.+++..- .|++|||+|+..|+.+++++|+..|++++.+|+.|-|||--|+..|+.++
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~-g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~c 82 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNE-GLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDC 82 (117)
T ss_pred hHhhhhccCcHHHHHHHHHc-cccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHH
Confidence 35567777777777766655 55565543 67788888888888888888888888888888888888888888888888
Q ss_pred HHHHHHcCCCCCCcccCCCCCCHHHHH
Q 009183 209 CTVLVHAGTKQELTAKDKAGLTPTQLA 235 (541)
Q Consensus 209 v~~Ll~~g~~~~~~~~d~~g~t~l~~A 235 (541)
|++|++.|+ +.+.+..+|.+.++.+
T Consensus 83 VklLL~~GA--drt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 83 VKLLLQNGA--DRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHHHcCc--ccceeCCCchhHHhhc
Confidence 888888887 4455566676655544
No 85
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.51 E-value=6e-13 Score=124.86 Aligned_cols=130 Identities=32% Similarity=0.447 Sum_probs=85.2
Q ss_pred CccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCC-----HHHHHHHHhCCC---CCCcccc
Q 009183 53 VSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGS-----IAVADVLVQNGA---RVEAADV 124 (541)
Q Consensus 53 ~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~-----~~~v~~Ll~~g~---~~~~~d~ 124 (541)
....+..+.+++|.|+..+..+++++++..|++++.++.+|.||||+|+..|+ .++++.|++.|+ +.+.+|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~ 145 (235)
T COG0666 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE 145 (235)
T ss_pred cccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence 33445556666666666666666666666666666666666666666666666 666666666666 4444566
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcC
Q 009183 125 HGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRD 183 (541)
Q Consensus 125 ~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g 183 (541)
.|.||+|+|+..|+.+++..|++. +.+++..+..|.|++++|+..++.+++..+++.+
T Consensus 146 ~g~tpl~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 146 DGNTPLHWAALNGDADIVELLLEA-GADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCchhHHHHHcCchHHHHHHHhc-CCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 666666666666666666666654 6666666666666666666666666666666654
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.47 E-value=3.5e-13 Score=121.48 Aligned_cols=121 Identities=25% Similarity=0.308 Sum_probs=111.2
Q ss_pred cchhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCC-CCCCchHHHHHHHh
Q 009183 25 AAVTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNAT-DNNGQTALHWAAVR 103 (541)
Q Consensus 25 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~-~~~g~tpL~~A~~~ 103 (541)
....+|..++..|+.+....||.. --.+|.+|.+|.++|..|+..|+.++|+.|++.|+|+|.. ++.++||||+|+.+
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS 89 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS 89 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence 346789999999999999999975 5569999999999999999999999999999999999976 55789999999999
Q ss_pred CCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHH
Q 009183 104 GSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIV 146 (541)
Q Consensus 104 g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll 146 (541)
|+.++.++|++.|+.+...+.-|.|+-..|+.-|+-+.|..+-
T Consensus 90 Gn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 90 GNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred CCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHh
Confidence 9999999999999999999999999999999999988886543
No 87
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=8.6e-13 Score=128.11 Aligned_cols=119 Identities=25% Similarity=0.371 Sum_probs=97.8
Q ss_pred hhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCH
Q 009183 27 VTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSI 106 (541)
Q Consensus 27 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~ 106 (541)
.-.|..|+..|.+|+|+..+.+ -.|+...+.+|.|+||-|+-.||.+||++|++.|+|||+.|.+|+||||.|+..+++
T Consensus 551 LaLLLDaaLeGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv 629 (752)
T KOG0515|consen 551 LALLLDAALEGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNV 629 (752)
T ss_pred HHHHHhhhhcchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCch
Confidence 3446799999999999999876 678888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCccc-cCCChHHHHHH--HcCCHHHHHHHH
Q 009183 107 AVADVLVQNGARVEAAD-VHGYRAVHVAA--QYGQTSFLNHIV 146 (541)
Q Consensus 107 ~~v~~Ll~~g~~~~~~d-~~g~t~l~~A~--~~g~~~~v~~Ll 146 (541)
.+++.|++.|+-+.+.. .++.|+..-+- ..|...+.+||-
T Consensus 630 ~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~ 672 (752)
T KOG0515|consen 630 PMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLY 672 (752)
T ss_pred HHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHH
Confidence 99999999998876544 34455544332 234455555554
No 88
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.38 E-value=5e-13 Score=94.57 Aligned_cols=55 Identities=36% Similarity=0.642 Sum_probs=23.6
Q ss_pred HHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHH
Q 009183 46 VEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWA 100 (541)
Q Consensus 46 l~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A 100 (541)
|+..+.+++.+|..|.||||+||..|+.+++++|++.|++++.+|.+|+||||+|
T Consensus 2 L~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 2 LEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 3333366666666666666666666666666666666666666666666666665
No 89
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.38 E-value=1e-12 Score=92.48 Aligned_cols=54 Identities=39% Similarity=0.757 Sum_probs=33.7
Q ss_pred CchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHH
Q 009183 60 GYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLV 113 (541)
Q Consensus 60 g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 113 (541)
|.||||+|+..|+.+++++|+++|.+++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 566777777777777777777777777777667777777777777777777664
No 90
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.38 E-value=3.3e-12 Score=115.28 Aligned_cols=122 Identities=28% Similarity=0.343 Sum_probs=98.2
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcc-cCCCCcHHHHHHHcCC
Q 009183 127 YRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQ-DKDGCTPLHWAALRGN 205 (541)
Q Consensus 127 ~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-d~~g~tpLh~A~~~g~ 205 (541)
..+|.-++..+..+-..-|++. --.++..|.+|.|+|..|+++|+.+++++|++.|+|+|.. +..+.||||+|+.+|+
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn 91 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN 91 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence 3577777777777777777754 3347888888999999999999999999999999988864 4458899999999999
Q ss_pred HHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhh
Q 009183 206 VEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQ 251 (541)
Q Consensus 206 ~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~ 251 (541)
.++.++|++.|+ .....|.-|+|+-++|+--|+.+.|..+.+.-
T Consensus 92 ~dvcrllldaGa--~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 92 QDVCRLLLDAGA--RMYLVNSVGRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred chHHHHHHhccC--ccccccchhhhHHHHHHHhcchHHHHHHhccc
Confidence 999999999888 45567888899999998888888888776654
No 91
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.38 E-value=6.6e-12 Score=135.18 Aligned_cols=106 Identities=25% Similarity=0.302 Sum_probs=88.2
Q ss_pred HHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHH
Q 009183 63 ALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFL 142 (541)
Q Consensus 63 ~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v 142 (541)
.|+.|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv 164 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVV 164 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHH
Confidence 47788889999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh------cCCCcccCCCCCCcHHHHHH
Q 009183 143 NHIVAK------YHADYDASDNEGRSPLHWAA 168 (541)
Q Consensus 143 ~~Ll~~------~~~~~~~~d~~g~t~L~~A~ 168 (541)
++|+.. .+++.+..+..|.+|+..+.
T Consensus 165 ~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 165 QLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 888864 35566666666666655443
No 92
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.36 E-value=1.7e-12 Score=91.46 Aligned_cols=54 Identities=48% Similarity=0.826 Sum_probs=38.1
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHH
Q 009183 160 GRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLV 213 (541)
Q Consensus 160 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 213 (541)
|.||||+|+..|+.+++++|+++|.+++.+|.+|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 567888888888888888888778888888777888888888888888887775
No 93
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.36 E-value=3.1e-12 Score=137.74 Aligned_cols=105 Identities=23% Similarity=0.329 Sum_probs=96.6
Q ss_pred hHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHH
Q 009183 29 DVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAV 108 (541)
Q Consensus 29 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~ 108 (541)
.|+.|+..|+.+.++.|++. |+++|.+|.+|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~-Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i 163 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTG-GADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV 163 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence 58899999999999988864 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhC-------CCCCCccccCCChHHHHHH
Q 009183 109 ADVLVQN-------GARVEAADVHGYRAVHVAA 134 (541)
Q Consensus 109 v~~Ll~~-------g~~~~~~d~~g~t~l~~A~ 134 (541)
+++|+++ |++.+..+..|.+++..+.
T Consensus 164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 164 VQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999998 8888888887877765543
No 94
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.36 E-value=8.7e-13 Score=93.33 Aligned_cols=55 Identities=47% Similarity=0.753 Sum_probs=30.6
Q ss_pred HHhCC-CCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHH
Q 009183 79 IIDHG-GDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVA 133 (541)
Q Consensus 79 Ll~~g-~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A 133 (541)
|+++| ++++.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||+|+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56677 78888888899999999999999999999988999999999999998886
No 95
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=2.2e-11 Score=118.46 Aligned_cols=120 Identities=28% Similarity=0.379 Sum_probs=103.1
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHH
Q 009183 130 VHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEAC 209 (541)
Q Consensus 130 l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v 209 (541)
|.-|+..|.+++|+.++.+ -.|+...+..|-|+||-|+.-|+.++|++|++.|+++|..|.+|+||||.|+..++..++
T Consensus 554 LLDaaLeGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c 632 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC 632 (752)
T ss_pred HHhhhhcchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence 3447788999999998876 567888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCcccCCCCCCHHHHHH--hcCchHHHHHHHHhh
Q 009183 210 TVLVHAGTKQELTAKDKAGLTPTQLAY--DKGHRQVALYLSNAQ 251 (541)
Q Consensus 210 ~~Ll~~g~~~~~~~~d~~g~t~l~~A~--~~~~~~i~~~L~~~~ 251 (541)
+.|++.|+- -+...-.++.||.+-+- +.|+.+..++|-...
T Consensus 633 kqLVe~Gaa-vfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~vq 675 (752)
T KOG0515|consen 633 KQLVESGAA-VFASTLSDMETAAEKCEEMEEGYDQCSQYLYGVQ 675 (752)
T ss_pred HHHHhccce-EEeeecccccchhhhcchhhhhHHHHHHHHHHHH
Confidence 999999983 33344467889988775 458888889886543
No 96
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.93 E-value=3.9e-09 Score=102.29 Aligned_cols=99 Identities=29% Similarity=0.368 Sum_probs=88.4
Q ss_pred CcccCCCCCCcH------HHHHHHhCcHHHHHHHHhcCCCCCcccCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCccc
Q 009183 152 DYDASDNEGRSP------LHWAAYKGFADTIRLLLFRDASQGRQDKD-GCTPLHWAALRGNVEACTVLVHAGTKQELTAK 224 (541)
Q Consensus 152 ~~~~~d~~g~t~------L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~ 224 (541)
....+|.+|.+. ||..++.|+.+..-.|+..|+++|.-+.+ |.||||.|++.|+..-+++|+-+|+ |+...
T Consensus 119 ~~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGA--D~~a~ 196 (669)
T KOG0818|consen 119 RLPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGA--DPGAQ 196 (669)
T ss_pred cCCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccC--CCCCC
Confidence 355677777654 89999999999999999999999998877 9999999999999999999999999 88899
Q ss_pred CCCCCCHHHHHHhcCchHHHHHHHHhhh
Q 009183 225 DKAGLTPTQLAYDKGHRQVALYLSNAQH 252 (541)
Q Consensus 225 d~~g~t~l~~A~~~~~~~i~~~L~~~~~ 252 (541)
|.+|+||+++|...||.++.+-|.+..-
T Consensus 197 d~~GmtP~~~AR~~gH~~laeRl~e~~y 224 (669)
T KOG0818|consen 197 DSSGMTPVDYARQGGHHELAERLVEIQY 224 (669)
T ss_pred CCCCCcHHHHHHhcCchHHHHHHHHHHH
Confidence 9999999999999999999887776543
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.87 E-value=1.2e-09 Score=112.08 Aligned_cols=87 Identities=32% Similarity=0.436 Sum_probs=76.6
Q ss_pred CCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCC
Q 009183 150 HADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKD-GCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAG 228 (541)
Q Consensus 150 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g 228 (541)
+--.+.+|..|+|+||.|+..+..+++++|+++|++++.+|.+ |.||||.|+..|+.+++..|+.+|+ .+..+|++|
T Consensus 42 ~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~--SL~i~Dkeg 119 (1267)
T KOG0783|consen 42 QNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGR--SLRIKDKEG 119 (1267)
T ss_pred hhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCC--ceEEecccC
Confidence 3346788899999999999999999999999999999999887 9999999999999999999999996 788899999
Q ss_pred CCHHHHHHhc
Q 009183 229 LTPTQLAYDK 238 (541)
Q Consensus 229 ~t~l~~A~~~ 238 (541)
.+||+..++-
T Consensus 120 lsplq~~~r~ 129 (1267)
T KOG0783|consen 120 LSPLQFLSRV 129 (1267)
T ss_pred CCHHHHHhhc
Confidence 9999988773
No 98
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.83 E-value=1.2e-08 Score=100.36 Aligned_cols=118 Identities=29% Similarity=0.408 Sum_probs=105.4
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCC--CCCCCCCCchHHHHHHHhCCHH
Q 009183 30 VFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGD--VNATDNNGQTALHWAAVRGSIA 107 (541)
Q Consensus 30 L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~--~~~~~~~g~tpL~~A~~~g~~~ 107 (541)
|..|+.++++-.+++.-.. |-++-.++.+..+.||+|++.|+-|+|++++++|.. ++..+..|.|+||-|+..++-.
T Consensus 870 il~av~~~D~~klqE~h~~-gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLN-GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHhc-CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 7889999998777777655 667778899999999999999999999999999874 4566788999999999999999
Q ss_pred HHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHh
Q 009183 108 VADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAK 148 (541)
Q Consensus 108 ~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~ 148 (541)
+.++|++.|+.+...|..|.||-.-|-+.|..+...||-.+
T Consensus 949 vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 949 VCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 99999999999999999999999999999999999988754
No 99
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.82 E-value=1.4e-08 Score=99.88 Aligned_cols=120 Identities=28% Similarity=0.341 Sum_probs=100.8
Q ss_pred HHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCC--CCcccCCCCcHHHHHHHcCCHH
Q 009183 130 VHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDAS--QGRQDKDGCTPLHWAALRGNVE 207 (541)
Q Consensus 130 l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~d~~g~tpLh~A~~~g~~~ 207 (541)
+..|+..+..--+..... .|.++-.++.+..+.||+|+..|+-++|+|++.+|.. ++..|..|.|+||.|+..++..
T Consensus 870 il~av~~~D~~klqE~h~-~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~ 948 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHL-NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRA 948 (1004)
T ss_pred HHHHHHhccHHHHHHHHh-cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchH
Confidence 344554444333333332 3778888999999999999999999999999999875 5778889999999999999999
Q ss_pred HHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHHHhhh
Q 009183 208 ACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLSNAQH 252 (541)
Q Consensus 208 ~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~~~ 252 (541)
+.++|++.|+ .+.-.|..|+||-.-|.+.|..++..+|.+.+.
T Consensus 949 vc~~lvdaga--sl~ktd~kg~tp~eraqqa~d~dlaayle~rq~ 991 (1004)
T KOG0782|consen 949 VCQLLVDAGA--SLRKTDSKGKTPQERAQQAGDPDLAAYLESRQN 991 (1004)
T ss_pred HHHHHHhcch--hheecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence 9999999998 777889999999999999999999999987653
No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.78 E-value=3e-08 Score=96.26 Aligned_cols=95 Identities=26% Similarity=0.311 Sum_probs=84.2
Q ss_pred CccCCCCCchH------HHHHHHcCcHHHHHHHHhCCCCCCCCCC-CCchHHHHHHHhCCHHHHHHHHhCCCCCCccccC
Q 009183 53 VSRPDGNGYFA------LQWAALNNFADIAQYIIDHGGDVNATDN-NGQTALHWAAVRGSIAVADVLVQNGARVEAADVH 125 (541)
Q Consensus 53 ~~~~d~~g~t~------Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~ 125 (541)
+..+|.+|.|. ||..++.|+.+..-.|+..|+++|..+. .|.||||.|++.|+.--+++|+-+|||+...|.+
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~ 199 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSS 199 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCC
Confidence 44567777764 8999999999999999999999998876 5899999999999999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHH
Q 009183 126 GYRAVHVAAQYGQTSFLNHIVA 147 (541)
Q Consensus 126 g~t~l~~A~~~g~~~~v~~Ll~ 147 (541)
|.||+.+|-+.||-++.+.|++
T Consensus 200 GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 200 GMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred CCcHHHHHHhcCchHHHHHHHH
Confidence 9999999999999888777765
No 101
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.74 E-value=9.2e-09 Score=105.65 Aligned_cols=100 Identities=27% Similarity=0.386 Sum_probs=87.8
Q ss_pred cCCHHHHHHHHHhcC-CCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCC-CCchHHHHHHHhCCHHHHHHHH
Q 009183 36 YGDFEKLRKFVEEDG-ASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDN-NGQTALHWAAVRGSIAVADVLV 113 (541)
Q Consensus 36 ~g~~~~v~~ll~~~~-~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll 113 (541)
.+....++-++.+.. .-.|.+|.-|.|+||+|+..+..++++||+++|+++..+|. .|+||||-|+..|+++++-.|+
T Consensus 27 Ks~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL 106 (1267)
T KOG0783|consen 27 KSEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLL 106 (1267)
T ss_pred cCChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHH
Confidence 334434666666543 34788899999999999999999999999999999999987 6999999999999999999999
Q ss_pred hCCCCCCccccCCChHHHHHHH
Q 009183 114 QNGARVEAADVHGYRAVHVAAQ 135 (541)
Q Consensus 114 ~~g~~~~~~d~~g~t~l~~A~~ 135 (541)
++|+.+..+|++|.+||..-++
T Consensus 107 ~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 107 SKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred hcCCceEEecccCCCHHHHHhh
Confidence 9999999999999999998776
No 102
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.70 E-value=1.6e-08 Score=97.76 Aligned_cols=95 Identities=31% Similarity=0.350 Sum_probs=87.1
Q ss_pred CCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHH
Q 009183 157 DNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAY 236 (541)
Q Consensus 157 d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~ 236 (541)
+.++..++++|++.|....++.+.-.|.|++.+|.+.+|+||.|+..|+.+++++|++.- +.+...+|.-|+|||+-|.
T Consensus 503 ~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~-kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 503 ENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNAC-KVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred cccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHH-cCCCChhhccCCCcchHhH
Confidence 345567899999999999999999999999999999999999999999999999999874 3688999999999999999
Q ss_pred hcCchHHHHHHHHhhh
Q 009183 237 DKGHRQVALYLSNAQH 252 (541)
Q Consensus 237 ~~~~~~i~~~L~~~~~ 252 (541)
.-+|.+++++|.+...
T Consensus 582 ~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQY 597 (622)
T ss_pred hcCcHHHHHHHHHHhc
Confidence 9999999999988764
No 103
>PF13606 Ank_3: Ankyrin repeat
Probab=98.70 E-value=2.1e-08 Score=60.30 Aligned_cols=28 Identities=43% Similarity=0.717 Sum_probs=16.6
Q ss_pred CchHHHHHHHcCcHHHHHHHHhCCCCCC
Q 009183 60 GYFALQWAALNNFADIAQYIIDHGGDVN 87 (541)
Q Consensus 60 g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~ 87 (541)
|+||||+||..|+.|++++|+++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5556666666666666666666655554
No 104
>PF13606 Ank_3: Ankyrin repeat
Probab=98.62 E-value=4.9e-08 Score=58.66 Aligned_cols=29 Identities=45% Similarity=0.725 Sum_probs=26.6
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhCCCCCC
Q 009183 92 NGQTALHWAAVRGSIAVADVLVQNGARVE 120 (541)
Q Consensus 92 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 120 (541)
+|+||||+||+.|+.+++++|+++|+|++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 48899999999999999999999999886
No 105
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.61 E-value=6.1e-08 Score=60.13 Aligned_cols=31 Identities=39% Similarity=0.696 Sum_probs=17.0
Q ss_pred CchHHHHHHHcCcHHHHHHHHhCCCCCCCCC
Q 009183 60 GYFALQWAALNNFADIAQYIIDHGGDVNATD 90 (541)
Q Consensus 60 g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~ 90 (541)
|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 5555555555555555555555555555443
No 106
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.60 E-value=5e-08 Score=94.38 Aligned_cols=90 Identities=28% Similarity=0.323 Sum_probs=48.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHh-cCCCCCcccCCCCcHHHHHHHc
Q 009183 125 HGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLF-RDASQGRQDKDGCTPLHWAALR 203 (541)
Q Consensus 125 ~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~ 203 (541)
.+...+.+|+..|....++.+... +.+++.+|.+.+|+||.||..|+++++++|++ .+.+++.+|..|+|||.-|...
T Consensus 505 ~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F 583 (622)
T KOG0506|consen 505 DTVINVMYAAKNGDLSALRRFALQ-GMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF 583 (622)
T ss_pred cchhhhhhhhhcCCHHHHHHHHHh-cccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence 344445555555555555444433 55555555555555555555555555555554 2455555555555555555555
Q ss_pred CCHHHHHHHHHc
Q 009183 204 GNVEACTVLVHA 215 (541)
Q Consensus 204 g~~~~v~~Ll~~ 215 (541)
++.+++++|-++
T Consensus 584 ~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 584 KHKEVVKLLEEA 595 (622)
T ss_pred CcHHHHHHHHHH
Confidence 555555555443
No 107
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.55 E-value=1.1e-07 Score=58.86 Aligned_cols=33 Identities=39% Similarity=0.696 Sum_probs=29.8
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhCCCCCCcccc
Q 009183 92 NGQTALHWAAVRGSIAVADVLVQNGARVEAADV 124 (541)
Q Consensus 92 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~ 124 (541)
+|.||||+|+..|+.+++++|+++|++++.+|.
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 588999999999999999999999999988763
No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.52 E-value=5.9e-07 Score=93.88 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=97.0
Q ss_pred CCCcchhhHHHHHHcCCHHHHHHHHHhcC---CCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHH
Q 009183 22 DNQAAVTDVFSASAYGDFEKLRKFVEEDG---ASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALH 98 (541)
Q Consensus 22 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~---~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~ 98 (541)
....++.....|++.||...|++.++... .++|..|.-|.++|+.|..+.+.|++++|++++.+. ..+|.
T Consensus 21 ~l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL 93 (822)
T KOG3609|consen 21 DLNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALL 93 (822)
T ss_pred ccchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHH
Confidence 44455667889999999999999998755 478999999999999999999999999999987554 45899
Q ss_pred HHHHhCCHHHHHHHHhCCCCCC----------ccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcc
Q 009183 99 WAAVRGSIAVADVLVQNGARVE----------AADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYD 154 (541)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~g~~~~----------~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~ 154 (541)
.|+..|..++++.++.+..... ..-..+.||+.+||..++.|+++.|+.+ |+.+.
T Consensus 94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k-g~~i~ 158 (822)
T KOG3609|consen 94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR-GHCIP 158 (822)
T ss_pred HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc-CCCCC
Confidence 9999999999999998754331 1123455666666666666666666655 44443
No 109
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.40 E-value=1.2e-06 Score=86.96 Aligned_cols=82 Identities=32% Similarity=0.477 Sum_probs=40.4
Q ss_pred HHHHcCcHHHHHHHHhCCCC--CCC--CCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHH
Q 009183 66 WAALNNFADIAQYIIDHGGD--VNA--TDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSF 141 (541)
Q Consensus 66 ~A~~~~~~~iv~~Ll~~g~~--~~~--~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~ 141 (541)
.|+.......+-+|+.+|.. ++. .+.+|.|+||+||+.|++.+.++|+-+|+|+..+|.+|.|+|.+|-+.|..++
T Consensus 630 ~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec 709 (749)
T KOG0705|consen 630 RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQEC 709 (749)
T ss_pred HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHH
Confidence 34444444444455554432 121 12344555555555555555555555555555555555555555555555555
Q ss_pred HHHHHH
Q 009183 142 LNHIVA 147 (541)
Q Consensus 142 v~~Ll~ 147 (541)
+..|++
T Consensus 710 ~d~llq 715 (749)
T KOG0705|consen 710 IDVLLQ 715 (749)
T ss_pred HHHHHH
Confidence 555553
No 110
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.32 E-value=1.5e-06 Score=85.97 Aligned_cols=88 Identities=28% Similarity=0.372 Sum_probs=69.9
Q ss_pred HHHHHHHcCCHHH-HHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHH
Q 009183 129 AVHVAAQYGQTSF-LNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVE 207 (541)
Q Consensus 129 ~l~~A~~~g~~~~-v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~ 207 (541)
|+|.++.....+- .+.|..+....++..|..|+||||.|+..|+.+.++.|+..|+++..++++|++|||-|+..|+.+
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q 102 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ 102 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence 4777776665543 334444446678888888999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHcC
Q 009183 208 ACTVLVHAG 216 (541)
Q Consensus 208 ~v~~Ll~~g 216 (541)
++..++.+-
T Consensus 103 ~i~~vlr~~ 111 (560)
T KOG0522|consen 103 IITEVLRHL 111 (560)
T ss_pred HHHHHHHHh
Confidence 888777653
No 111
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.32 E-value=1e-06 Score=87.17 Aligned_cols=88 Identities=20% Similarity=0.262 Sum_probs=62.5
Q ss_pred hhHHHHHHcCCHHHHHHHHHh-cCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCH
Q 009183 28 TDVFSASAYGDFEKLRKFVEE-DGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSI 106 (541)
Q Consensus 28 ~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~ 106 (541)
.++|.++-..+.+.+.+.+.. ....++.+|..|.||||+|+.-|+.+.++.|+..|+++..++..|++|||-|+..|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~ 101 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNE 101 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCH
Confidence 347777777776666664433 3445667777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHhC
Q 009183 107 AVADVLVQN 115 (541)
Q Consensus 107 ~~v~~Ll~~ 115 (541)
+++..++.+
T Consensus 102 q~i~~vlr~ 110 (560)
T KOG0522|consen 102 QIITEVLRH 110 (560)
T ss_pred HHHHHHHHH
Confidence 777766654
No 112
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.19 E-value=5.2e-06 Score=82.64 Aligned_cols=89 Identities=28% Similarity=0.400 Sum_probs=53.4
Q ss_pred HHHHHHHhCCHHHHHHHHhCCCCCC----ccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhC
Q 009183 96 ALHWAAVRGSIAVADVLVQNGARVE----AADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKG 171 (541)
Q Consensus 96 pL~~A~~~g~~~~v~~Ll~~g~~~~----~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~ 171 (541)
-|.-|....++..+-+|+.+|.... .-+.+|.|+||+||..|+..+.+.|+ =+|+|+..+|..|+|+|.+|-+.|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLi-Wyg~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLI-WYGVDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHH-HhCccceecccCCchhhhhHhhcc
Confidence 3444555556666666666653322 22345566666666666666665555 346666666666666666666666
Q ss_pred cHHHHHHHHhcCCC
Q 009183 172 FADTIRLLLFRDAS 185 (541)
Q Consensus 172 ~~~~v~~Ll~~g~~ 185 (541)
..+++..|+.+|..
T Consensus 706 sqec~d~llq~gcp 719 (749)
T KOG0705|consen 706 SQECIDVLLQYGCP 719 (749)
T ss_pred cHHHHHHHHHcCCC
Confidence 66666666666654
No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.17 E-value=2.5e-06 Score=91.25 Aligned_cols=128 Identities=23% Similarity=0.400 Sum_probs=75.7
Q ss_pred ccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHH
Q 009183 123 DVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAAL 202 (541)
Q Consensus 123 d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~ 202 (541)
...|++.+|+++..+..-.+..+++-.+......|.+|...+|.++..|..-.+....-.|..++.+|..|+||||+|+.
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~ 650 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAF 650 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhh
Confidence 34555666666666655555555543234444555556666666444433222222223456666666666666666666
Q ss_pred cCCHHHHHHHHHcCCC----CCCcccCCCCCCHHHHHHhcCchHHHHHHHHh
Q 009183 203 RGNVEACTVLVHAGTK----QELTAKDKAGLTPTQLAYDKGHRQVALYLSNA 250 (541)
Q Consensus 203 ~g~~~~v~~Ll~~g~~----~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~~~ 250 (541)
+|+..++..|++.|+. .+.+..+-.|.|+-++|..+|+..+..+|.++
T Consensus 651 ~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 651 RGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred cCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 6666666666655543 23334445688888888888888888887665
No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.09 E-value=2.6e-06 Score=91.74 Aligned_cols=91 Identities=31% Similarity=0.401 Sum_probs=82.9
Q ss_pred CCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHh
Q 009183 158 NEGRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYD 237 (541)
Q Consensus 158 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~ 237 (541)
..|.|+||.|+..+...++++|++.|+++|..|..|+||||.+...|+...+..|++.|+ +.++.|.+|++|+++|.+
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a--~~~a~~~~~~~~l~~a~~ 731 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGA--DPNAFDPDGKLPLDIAME 731 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccc--cccccCccCcchhhHHhh
Confidence 457899999999999999999999999999999999999999999999999999999998 677889999999999988
Q ss_pred cCchHHHHHHHHh
Q 009183 238 KGHRQVALYLSNA 250 (541)
Q Consensus 238 ~~~~~i~~~L~~~ 250 (541)
..+.+++-++.-.
T Consensus 732 ~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 732 AANADIVLLLRLA 744 (785)
T ss_pred hccccHHHHHhhh
Confidence 8888877766543
No 115
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.05 E-value=3.9e-05 Score=80.60 Aligned_cols=120 Identities=17% Similarity=0.175 Sum_probs=72.8
Q ss_pred HHHHHHHcCcHHHHHHHHhCC----CCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCC
Q 009183 63 ALQWAALNNFADIAQYIIDHG----GDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQ 138 (541)
Q Consensus 63 ~Lh~A~~~~~~~iv~~Ll~~g----~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~ 138 (541)
-...|+..|+...|+..++.. .++|..|.-|.++|+.|..+.+.+++++|++++... ..+|.+|+..|.
T Consensus 28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~ 100 (822)
T KOG3609|consen 28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGS 100 (822)
T ss_pred HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHH
Confidence 445677777777777776542 245556667777777777777777777777775443 347777777777
Q ss_pred HHHHHHHHHhcCCCc---------ccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCcc
Q 009183 139 TSFLNHIVAKYHADY---------DASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGRQ 189 (541)
Q Consensus 139 ~~~v~~Ll~~~~~~~---------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 189 (541)
.+.|+.++....... ...-..+.||++.||..++.++++.|+.+|+.+...
T Consensus 101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 777777775421110 011122345555555555555555555555555443
No 116
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.02 E-value=1.5e-05 Score=68.47 Aligned_cols=64 Identities=27% Similarity=0.385 Sum_probs=34.0
Q ss_pred CCccCCCCCchHHHHHHHcCcHHHHHHHHhCC-CCCCCCCCCCchHHHHHHHhCCHHHHHHHHhC
Q 009183 52 SVSRPDGNGYFALQWAALNNFADIAQYIIDHG-GDVNATDNNGQTALHWAAVRGSIAVADVLVQN 115 (541)
Q Consensus 52 ~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g-~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 115 (541)
++|.+|.-|+|+|+.|+..|+.+.+.+|+.+| +.|...|..|.+++.+|-+.|..+.++.|.+.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 44555555555555555555555555555555 45555555555555555555555555555544
No 117
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.96 E-value=1.9e-05 Score=67.91 Aligned_cols=79 Identities=29% Similarity=0.389 Sum_probs=60.8
Q ss_pred CCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCC-CCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCC
Q 009183 83 GGDVNATDNNGQTALHWAAVRGSIAVADVLVQNG-ARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGR 161 (541)
Q Consensus 83 g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~ 161 (541)
+.++|.+|..|+||++.|+..|+.+.+.+|+++| +.+...|..|.+++.+|-+.|..+++..|.+. ..+.+..+.+..
T Consensus 2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~-~~ets~p~nss~ 80 (223)
T KOG2384|consen 2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN-DRETSHPMNSSR 80 (223)
T ss_pred CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH-hccCCCcccCCC
Confidence 3567888888888888888888888888888888 88888888888888888888888888887775 333334443333
Q ss_pred c
Q 009183 162 S 162 (541)
Q Consensus 162 t 162 (541)
+
T Consensus 81 ~ 81 (223)
T KOG2384|consen 81 D 81 (223)
T ss_pred C
Confidence 3
No 118
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.94 E-value=3.4e-05 Score=73.21 Aligned_cols=71 Identities=21% Similarity=0.337 Sum_probs=60.9
Q ss_pred hhhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHH
Q 009183 27 VTDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALH 98 (541)
Q Consensus 27 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~ 98 (541)
.-.|+.|++.|+.+.|+.|++ .|.++|.+|.-..+||.+|+..||.++||+|+++|+-.+.-..+|.-.+.
T Consensus 37 f~elceacR~GD~d~v~~LVe-tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Y 107 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVE-TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHY 107 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHH-hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhh
Confidence 456899999999999999998 59999999999999999999999999999999999876665556666643
No 119
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.93 E-value=1.1e-05 Score=86.50 Aligned_cols=123 Identities=19% Similarity=0.250 Sum_probs=56.7
Q ss_pred CCCCchHHHHHHHcCcHHHHHHHHhC-CCCCCCCCCCCchHHHHHHHhCCHHHHHHHH-hCCCCCCccccCCChHHHHHH
Q 009183 57 DGNGYFALQWAALNNFADIAQYIIDH-GGDVNATDNNGQTALHWAAVRGSIAVADVLV-QNGARVEAADVHGYRAVHVAA 134 (541)
Q Consensus 57 d~~g~t~Lh~A~~~~~~~iv~~Ll~~-g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~l~~A~ 134 (541)
...|++.+|+++..+..-+++.+++- |......+.+|.-.+|+++. ++.+.+-+++ -.|..++.+|..|+||||+|+
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa 649 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAIDIRDRNGWTPLHWAA 649 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh-cCCceeEEEEeecccccccccCCCCcccchHh
Confidence 34455555555555555555555543 33334444444444444332 2223332222 244555555555555555555
Q ss_pred HcCCHHHHHHHHHhc---C--CCcccCCCCCCcHHHHHHHhCcHHHHHHHH
Q 009183 135 QYGQTSFLNHIVAKY---H--ADYDASDNEGRSPLHWAAYKGFADTIRLLL 180 (541)
Q Consensus 135 ~~g~~~~v~~Ll~~~---~--~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 180 (541)
..|+..++..|.+.. + .++...+-.|.|+...|..+|+..+..+|-
T Consensus 650 ~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~ls 700 (975)
T KOG0520|consen 650 FRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLS 700 (975)
T ss_pred hcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHh
Confidence 555555555554320 1 112222334555555555555555555444
No 120
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.89 E-value=1.1e-05 Score=87.17 Aligned_cols=83 Identities=35% Similarity=0.432 Sum_probs=51.3
Q ss_pred CCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhC
Q 009183 92 NGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKG 171 (541)
Q Consensus 92 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~ 171 (541)
.|.|+||.|+..|...+.+.|+++|++++.+|..|.+|+|.+...|+...+..++.+ +++.+..+.+|.+|++.|....
T Consensus 655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~-~a~~~a~~~~~~~~l~~a~~~~ 733 (785)
T KOG0521|consen 655 IGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKR-GADPNAFDPDGKLPLDIAMEAA 733 (785)
T ss_pred cccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccc-cccccccCccCcchhhHHhhhc
Confidence 455666666666666666666666666666666666666666666666666555543 6666666666666666665554
Q ss_pred cHHH
Q 009183 172 FADT 175 (541)
Q Consensus 172 ~~~~ 175 (541)
+.+.
T Consensus 734 ~~d~ 737 (785)
T KOG0521|consen 734 NADI 737 (785)
T ss_pred cccH
Confidence 4333
No 121
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.69 E-value=0.00011 Score=69.91 Aligned_cols=74 Identities=28% Similarity=0.328 Sum_probs=61.8
Q ss_pred hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHc
Q 009183 62 FALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQY 136 (541)
Q Consensus 62 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~ 136 (541)
--|..||+.|..+.|++|++.|.++|..|.-..+||.+|+..||.+.+++|+++||-...-.-+|.-. |+++.+
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC-~YgaLn 111 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRC-HYGALN 111 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchh-hhhhhh
Confidence 36889999999999999999999999999999999999999999999999999998765444455544 344443
No 122
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.65 E-value=0.0033 Score=36.48 Aligned_cols=27 Identities=30% Similarity=0.525 Sum_probs=15.0
Q ss_pred CchHHHHHHHcCcHHHHHHHHhCCCCC
Q 009183 60 GYFALQWAALNNFADIAQYIIDHGGDV 86 (541)
Q Consensus 60 g~t~Lh~A~~~~~~~iv~~Ll~~g~~~ 86 (541)
|.||+|+|+..++.++++.|++++.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 455555555555555555555555443
No 123
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.55 E-value=0.0054 Score=60.87 Aligned_cols=71 Identities=28% Similarity=0.308 Sum_probs=58.4
Q ss_pred HHHHHHHHhcCCCCCc------ccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHH
Q 009183 173 ADTIRLLLFRDASQGR------QDKDGCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALY 246 (541)
Q Consensus 173 ~~~v~~Ll~~g~~~~~------~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~ 246 (541)
...+++|.+++.+.|. .+..--|+||+|+..|..++|.+||+.|. |..++|..|+||.+++. +.|+-..
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~--Dp~~kd~~Grtpy~ls~---nkdVk~~ 478 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGC--DPSTKDGAGRTPYSLSA---NKDVKSI 478 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcC--CchhcccCCCCcccccc---cHHHHHH
Confidence 6788889888877753 23346799999999999999999999996 88899999999999987 5565555
Q ss_pred HH
Q 009183 247 LS 248 (541)
Q Consensus 247 L~ 248 (541)
..
T Consensus 479 F~ 480 (591)
T KOG2505|consen 479 FI 480 (591)
T ss_pred HH
Confidence 44
No 124
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.35 E-value=0.0065 Score=35.12 Aligned_cols=28 Identities=39% Similarity=0.711 Sum_probs=22.8
Q ss_pred CchHHHHHHHhCCHHHHHHHHhCCCCCC
Q 009183 93 GQTALHWAAVRGSIAVADVLVQNGARVE 120 (541)
Q Consensus 93 g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 120 (541)
|.||+|+|+..++.++++.|+++|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6788888888888888888888877653
No 125
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.11 E-value=0.0067 Score=60.23 Aligned_cols=64 Identities=20% Similarity=0.197 Sum_probs=49.5
Q ss_pred CcHHHHHHHHhCCCCCCCC------CCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHH
Q 009183 71 NFADIAQYIIDHGGDVNAT------DNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAA 134 (541)
Q Consensus 71 ~~~~iv~~Ll~~g~~~~~~------~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~ 134 (541)
.-++.++.|.+++.+.|.. +.--.|+||+|+.+|..+++.+|++.|+|+..+|..|.||..++.
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 3467788888887665432 223568888888888888888888888888888888888888776
No 126
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]
Probab=96.02 E-value=0.09 Score=51.15 Aligned_cols=126 Identities=23% Similarity=0.245 Sum_probs=79.3
Q ss_pred cCCccccccccccccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 009183 360 WTGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIWTAPHL 439 (541)
Q Consensus 360 ~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~ 439 (541)
++...++.|..|+.=-...-|||.--++||-+--| +=.-.|++++.+..+..++.....+.........
T Consensus 118 ~KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~-----------r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (309)
T COG5273 118 YKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNY-----------RFFYQFLLYTILVALVVLLSTAYYIAGIFSIRHD 186 (309)
T ss_pred ccCCCCccchhhcchhhccCccCcccccccCcchH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCC
Confidence 34455689999999999999999999999987433 5677899888777776666666555555544443
Q ss_pred CCCCcchhh-----hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHhhhhcccc
Q 009183 440 PADGTWIHY-----VLVHPGLVLFLVLDTIILIAGTTLTSIQAYQIARNITTNELANSVRYD 496 (541)
Q Consensus 440 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~~~~~~~~ 496 (541)
+........ .....+++..+++....+.++......+.+.+.++.++-|...-.+.+
T Consensus 187 ~~~~~~~li~~~~~~~~~~f~~~~~~~~~~~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~ 248 (309)
T COG5273 187 TSLAICFLIFGCSLLGVVFFIITTLLLLFLIYLILNNLTTIEFIQISRGGSTLEFFPLCRES 248 (309)
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhccceecccccchhccC
Confidence 332211100 011112222222333334455567778889999999998876544443
No 127
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=95.36 E-value=0.35 Score=42.24 Aligned_cols=138 Identities=14% Similarity=0.003 Sum_probs=65.5
Q ss_pred hHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHH
Q 009183 62 FALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSF 141 (541)
Q Consensus 62 t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~ 141 (541)
..+.-|++.+..++++..-+...+- -...++-...||+..+.++|+|+-+.-.-. +-.+....|......++
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qnL~i~-----~~~~iFdIA~~~kDlsL 119 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQNLHIY-----NPEDIFDIAFAKKDLSL 119 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhccCCC-----CchhhhhhhhhccchhH
Confidence 3566677777777776665543211 123456667777777777777774431111 11234455655555543
Q ss_pred HH---HHHHhcCCCcccCCCC--CCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHH
Q 009183 142 LN---HIVAKYHADYDASDNE--GRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLV 213 (541)
Q Consensus 142 v~---~Ll~~~~~~~~~~d~~--g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 213 (541)
.. .|+-.....-+..|.. -..-|.+|+.+|-...+.-.+++|.+++. ++|-.|+..++..++.+++
T Consensus 120 yslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 120 YSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence 11 1111100000000000 00124455555555555555555554443 4555555555555555544
No 128
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.03 E-value=0.44 Score=42.86 Aligned_cols=111 Identities=14% Similarity=0.237 Sum_probs=60.4
Q ss_pred hhHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCC----CCchHHHHHHH-
Q 009183 28 TDVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDN----NGQTALHWAAV- 102 (541)
Q Consensus 28 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~----~g~tpL~~A~~- 102 (541)
-.|-.|+..-|.+.+..++.+. .+-.+++-+|..++..+++.+|+++- +....|- .+.--+.++..
T Consensus 155 isledAV~AsN~~~i~~~VtdK--------kdA~~Am~~si~~~K~dva~~lls~f-~ft~~dv~~~~~~~ydieY~LS~ 225 (284)
T PF06128_consen 155 ISLEDAVKASNYEEISNLVTDK--------KDAHQAMWLSIGNAKEDVALYLLSKF-NFTKQDVASMEKELYDIEYLLSE 225 (284)
T ss_pred ccHHHHHhhcCHHHHHHHhcch--------HHHHHHHHHHhcccHHHHHHHHHhhc-ceecchhhhcCcchhhHHHHHhh
Confidence 3467888888888887776531 13446888888888888888888752 1111111 12223333322
Q ss_pred -hCCHHHHHHHHhCC-CCCCc---cccCCChHHHHHHHcCCHHHHHHHHH
Q 009183 103 -RGSIAVADVLVQNG-ARVEA---ADVHGYRAVHVAAQYGQTSFLNHIVA 147 (541)
Q Consensus 103 -~g~~~~v~~Ll~~g-~~~~~---~d~~g~t~l~~A~~~g~~~~v~~Ll~ 147 (541)
+.+..++++.+++| +++|. +.+.|.|-|..|.++++.+++..|++
T Consensus 226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk 275 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLK 275 (284)
T ss_pred cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHH
Confidence 23445555555555 33332 23345555555555555555555443
No 129
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.59 E-value=0.66 Score=41.79 Aligned_cols=113 Identities=14% Similarity=0.123 Sum_probs=66.0
Q ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCC----CCcHHHHHHH--
Q 009183 96 ALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNE----GRSPLHWAAY-- 169 (541)
Q Consensus 96 pL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~----g~t~L~~A~~-- 169 (541)
.|.-|+...+.+-+.-++...- .-.+++-+|+.++..+++.+|+.+... ..+|.- +.--+.++..
T Consensus 156 sledAV~AsN~~~i~~~VtdKk-------dA~~Am~~si~~~K~dva~~lls~f~f--t~~dv~~~~~~~ydieY~LS~h 226 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDKK-------DAHQAMWLSIGNAKEDVALYLLSKFNF--TKQDVASMEKELYDIEYLLSEH 226 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcchH-------HHHHHHHHHhcccHHHHHHHHHhhcce--ecchhhhcCcchhhHHHHHhhc
Confidence 4556666667666666655321 234688888888888899999886432 222211 1112233322
Q ss_pred hCcHHHHHHHHhcCC-CCCc---ccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 009183 170 KGFADTIRLLLFRDA-SQGR---QDKDGCTPLHWAALRGNVEACTVLVHAGT 217 (541)
Q Consensus 170 ~~~~~~v~~Ll~~g~-~~~~---~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~ 217 (541)
..+..++++++++|. ++|. +-+.|.|-|.-|+..++.+++..|+++|+
T Consensus 227 ~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 227 SASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred CCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 223566666666653 3432 23446777777777777777777777776
No 130
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=92.52 E-value=1.5 Score=38.35 Aligned_cols=138 Identities=15% Similarity=0.095 Sum_probs=91.0
Q ss_pred hHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHH
Q 009183 95 TALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFAD 174 (541)
Q Consensus 95 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~ 174 (541)
--+.-|+..+-..+++..-+...+- -...++..-.||+..+.++|+|+-+.... .+-.+....|..+.+.+
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~qnL~i------~~~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQNLHI------YNPEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhhccCC------CCchhhhhhhhhccchh
Confidence 3556788888888888777653321 12355678899999999999999653211 11234566777777665
Q ss_pred HH----HHHHhcCCCCCcccCC--CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCCCCCHHHHHHhcCchHHHHHHH
Q 009183 175 TI----RLLLFRDASQGRQDKD--GCTPLHWAALRGNVEACTVLVHAGTKQELTAKDKAGLTPTQLAYDKGHRQVALYLS 248 (541)
Q Consensus 175 ~v----~~Ll~~g~~~~~~d~~--g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~d~~g~t~l~~A~~~~~~~i~~~L~ 248 (541)
+. .++..+..+-...|.. -..-|++|+..|-...+...+++|.. .+ .++|..|+..+|..+..++.
T Consensus 119 LyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~--~~------~~vls~Av~ynhRkIL~yfi 190 (192)
T PF03158_consen 119 LYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGN--VD------IIVLSQAVKYNHRKILDYFI 190 (192)
T ss_pred HHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCc--cc------HHHHHHHHHhhHHHHHHHhh
Confidence 43 1222322222111111 12457899999999999999999972 21 27999999999999998875
Q ss_pred H
Q 009183 249 N 249 (541)
Q Consensus 249 ~ 249 (541)
.
T Consensus 191 ~ 191 (192)
T PF03158_consen 191 R 191 (192)
T ss_pred c
Confidence 3
No 131
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=92.07 E-value=0.4 Score=35.90 Aligned_cols=48 Identities=10% Similarity=0.365 Sum_probs=28.1
Q ss_pred hHHHHHHHhCCHHHHHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhc
Q 009183 95 TALHWAAVRGSIAVADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKY 149 (541)
Q Consensus 95 tpL~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~ 149 (541)
..+..|..+|+.|+++.+++.+ .++ ...+..|+...+.+++++|++++
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHhc
Confidence 3456666666666666666543 111 23566666666666666666653
No 132
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]
Probab=89.95 E-value=0.75 Score=44.89 Aligned_cols=43 Identities=26% Similarity=0.472 Sum_probs=34.5
Q ss_pred CCCcCCccchhhhhccCCcCceeeccccCCch-----------HHHHHHHHHHH
Q 009183 377 VRSKHCPACKCCVEQFDHHCPWISNCVGKRNK-----------RDFFIFLCLGT 419 (541)
Q Consensus 377 ~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~-----------~~F~~fl~~~~ 419 (541)
-+.|+|..|+..+...-|||..-|+||-+.=| |-+-.|+.+++
T Consensus 111 ~~~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~ 164 (299)
T KOG1311|consen 111 VEWKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF 164 (299)
T ss_pred cceEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence 35899999999999999999999999987654 45667885555
No 133
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.77 E-value=1 Score=33.71 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=20.7
Q ss_pred HHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhC
Q 009183 64 LQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQN 115 (541)
Q Consensus 64 Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 115 (541)
+..|+.+|+.|+++.+++.+ .++ ...+..|+...+-+++++|++.
T Consensus 10 l~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 10 LEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 44455555555555544432 111 2344555555555555555443
No 134
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding
Probab=87.83 E-value=4.1 Score=36.00 Aligned_cols=62 Identities=26% Similarity=0.417 Sum_probs=41.5
Q ss_pred CCccccccccccccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009183 361 TGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRI 433 (541)
Q Consensus 361 ~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~ 433 (541)
.....+.|..|+.--..+-|||..-+.||-+--| +-+-.|+++.....+..++.....+...
T Consensus 58 kp~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~~~~~~~~~~ 119 (174)
T PF01529_consen 58 KPPRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFILSLYYLVRY 119 (174)
T ss_pred CCCcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345678888888888888888888888887544 3455777776655555555444444433
No 135
>KOG3614 consensus Ca2+/Mg2+-permeable cation channels (LTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=86.69 E-value=8.1 Score=44.19 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=19.4
Q ss_pred hHHHHHHHcCcHHHHHHHHhCCCCC
Q 009183 62 FALQWAALNNFADIAQYIIDHGGDV 86 (541)
Q Consensus 62 t~Lh~A~~~~~~~iv~~Ll~~g~~~ 86 (541)
.++.-|...+.++.|++|+++|.+.
T Consensus 427 ~aM~dALv~DR~dFV~LLlEnGv~m 451 (1381)
T KOG3614|consen 427 SAMDDALVLDRPDFVRLLLENGVSM 451 (1381)
T ss_pred HHHHHHHHhCcHHHHHHHHHcCcch
Confidence 3556677888888888888888764
No 136
>PF13240 zinc_ribbon_2: zinc-ribbon domain
Probab=84.49 E-value=0.53 Score=26.02 Aligned_cols=21 Identities=33% Similarity=0.846 Sum_probs=17.8
Q ss_pred ccccccccCCCCCcCCccchh
Q 009183 367 LCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 367 ~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
+|+.|...-++.++.|+.|+.
T Consensus 1 ~Cp~CG~~~~~~~~fC~~CG~ 21 (23)
T PF13240_consen 1 YCPNCGAEIEDDAKFCPNCGT 21 (23)
T ss_pred CCcccCCCCCCcCcchhhhCC
Confidence 588898888889999998874
No 137
>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional
Probab=83.07 E-value=0.62 Score=30.62 Aligned_cols=22 Identities=27% Similarity=0.821 Sum_probs=20.7
Q ss_pred cccccccccCCCCCcCCccchh
Q 009183 366 QLCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
.+|..|...-|+|+..|+.|+.
T Consensus 15 ~ICrkC~ARnp~~A~~CRKCg~ 36 (48)
T PRK04136 15 KICMRCNARNPWRATKCRKCGY 36 (48)
T ss_pred cchhcccCCCCccccccccCCC
Confidence 7899999999999999999875
No 138
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]
Probab=81.71 E-value=11 Score=36.55 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=49.4
Q ss_pred HHHHHHHhhccCCCcccCCCCCCCCC-CCCCccccccCCCCCCcCCccccccccccccCCCCCcCCccchhhhhccCCcC
Q 009183 318 SLIMFYRCSSKDPGYIKRSQDIDNHT-DSEDPLLTIDLNNSPIWTGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDHHC 396 (541)
Q Consensus 318 ~~~~~~~~~~~dPG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC 396 (541)
...++.---+.-||+-|......... .-. + -..++.-.+..|.+|+-=-..--|||.--+.||---.|
T Consensus 66 ~~A~~~gPG~vp~~wkPe~~~D~~~lqfCk-~--------CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh-- 134 (414)
T KOG1314|consen 66 FNAIFTGPGFVPLGWKPENPKDEMFLQFCK-K--------CQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANH-- 134 (414)
T ss_pred HHHHhcCCCCCCCCCCCCCChhHHHHHHHh-h--------ccCcCCCccccchHHHHHHHhhccCCcchhhccccccc--
Confidence 34455566677888888654321110 000 0 00111123477999986666668999999999964443
Q ss_pred ceeeccccCCchHHHHHHHHHHH
Q 009183 397 PWISNCVGKRNKRDFFIFLCLGT 419 (541)
Q Consensus 397 ~wi~nCIG~~N~~~F~~fl~~~~ 419 (541)
.-.-+|++|.+...
T Consensus 135 ---------~~F~~FLlf~ivG~ 148 (414)
T KOG1314|consen 135 ---------AYFLRFLLFSIVGC 148 (414)
T ss_pred ---------HHHHHHHHHHHHhc
Confidence 35689999988843
No 139
>PF13248 zf-ribbon_3: zinc-ribbon domain
Probab=81.28 E-value=0.92 Score=25.90 Aligned_cols=22 Identities=32% Similarity=0.851 Sum_probs=19.2
Q ss_pred cccccccccCCCCCcCCccchh
Q 009183 366 QLCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
++|+.|...-++-++.|+.|+.
T Consensus 3 ~~Cp~Cg~~~~~~~~fC~~CG~ 24 (26)
T PF13248_consen 3 MFCPNCGAEIDPDAKFCPNCGA 24 (26)
T ss_pred CCCcccCCcCCcccccChhhCC
Confidence 6799999988999999999874
No 140
>PTZ00303 phosphatidylinositol kinase; Provisional
Probab=81.14 E-value=0.9 Score=48.12 Aligned_cols=31 Identities=32% Similarity=0.787 Sum_probs=23.4
Q ss_pred CCCcCCcc--ccccccccccCC-------CCCcCCccchh
Q 009183 357 SPIWTGNW--SQLCPTCKIIRP-------VRSKHCPACKC 387 (541)
Q Consensus 357 ~~~~~~~~--~~~C~~C~~~kp-------~Rs~HC~~C~~ 387 (541)
.+.|..+. ...|..|...-. .|-|||+.|++
T Consensus 450 APvWqpDDEaSdtC~~C~kkFfSlsK~L~~RKHHCRkCGr 489 (1374)
T PTZ00303 450 NPSWQKDDESSDSCPSCGRAFISLSRPLGTRAHHCRSCGI 489 (1374)
T ss_pred CCCCCCCcccCCcccCcCCcccccccccccccccccCCcc
Confidence 35666554 367999998774 39999999976
No 141
>PF12773 DZR: Double zinc ribbon
Probab=66.82 E-value=4.2 Score=27.39 Aligned_cols=34 Identities=29% Similarity=0.704 Sum_probs=24.2
Q ss_pred ccccccccccCC---CCCcCCccchhhhhccCCcCce
Q 009183 365 SQLCPTCKIIRP---VRSKHCPACKCCVEQFDHHCPW 398 (541)
Q Consensus 365 ~~~C~~C~~~kp---~Rs~HC~~C~~CV~~~DHHC~w 398 (541)
.+||+.|...-+ ...+.|..|+.=+...+.+|++
T Consensus 12 ~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~~~~fC~~ 48 (50)
T PF12773_consen 12 AKFCPHCGTPLPPPDQSKKICPNCGAENPPNAKFCPN 48 (50)
T ss_pred ccCChhhcCChhhccCCCCCCcCCcCCCcCCcCccCc
Confidence 377888876666 3366788888777777777764
No 142
>PHA02680 ORF090 IMV phosphorylated membrane protein; Provisional
Probab=66.09 E-value=36 Score=25.71 Aligned_cols=23 Identities=17% Similarity=0.137 Sum_probs=16.6
Q ss_pred HHHHHHHHHhhccchhHHhhhhc
Q 009183 471 TLTSIQAYQIARNITTNELANSV 493 (541)
Q Consensus 471 ~l~~~~~~~i~~n~Tt~E~~~~~ 493 (541)
.++++..|.-++..++.|++|..
T Consensus 62 Gilifs~y~~C~~~~~~~r~n~s 84 (91)
T PHA02680 62 GLFVFSMYRKCSGSMPYERLNNT 84 (91)
T ss_pred HHHHHHHhcccCCCceeecccCC
Confidence 46667777777787887877653
No 143
>COG1552 RPL40A Ribosomal protein L40E [Translation, ribosomal structure and biogenesis]
Probab=64.39 E-value=1.4 Score=29.03 Aligned_cols=22 Identities=27% Similarity=0.812 Sum_probs=20.3
Q ss_pred cccccccccCCCCCcCCccchh
Q 009183 366 QLCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
++|..|...-|+|+.-|+.|+.
T Consensus 15 kIC~rC~Arnp~~A~kCRkC~~ 36 (50)
T COG1552 15 KICRRCYARNPPRATKCRKCGY 36 (50)
T ss_pred HHHHHhcCCCCcchhHHhhccC
Confidence 7899999999999999998864
No 144
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=63.27 E-value=4.2 Score=23.25 Aligned_cols=21 Identities=38% Similarity=0.959 Sum_probs=17.4
Q ss_pred ccccccccCCCCCcCCccchh
Q 009183 367 LCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 367 ~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
.|+.|...-|.-++-|..||.
T Consensus 2 ~CP~C~~~V~~~~~~Cp~CG~ 22 (26)
T PF10571_consen 2 TCPECGAEVPESAKFCPHCGY 22 (26)
T ss_pred cCCCCcCCchhhcCcCCCCCC
Confidence 488998888888888888863
No 145
>KOG1842 consensus FYVE finger-containing protein [General function prediction only]
Probab=61.89 E-value=2.8 Score=41.65 Aligned_cols=25 Identities=32% Similarity=0.725 Sum_probs=20.0
Q ss_pred ccccccccccC--CCCCcCCccchhhh
Q 009183 365 SQLCPTCKIIR--PVRSKHCPACKCCV 389 (541)
Q Consensus 365 ~~~C~~C~~~k--p~Rs~HC~~C~~CV 389 (541)
..+|+.|...= ..|-|||+.||+-+
T Consensus 180 V~~CP~Ca~~F~l~rRrHHCRLCG~Vm 206 (505)
T KOG1842|consen 180 VQFCPECANSFGLTRRRHHCRLCGRVM 206 (505)
T ss_pred ccccccccchhhhHHHhhhhhhcchHH
Confidence 47999997543 67899999999844
No 146
>PF01020 Ribosomal_L40e: Ribosomal L40e family; InterPro: IPR001975 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the L40 ribosomal protein from both archaea and eukaryotes. Bovine ribosomal protein L40 has been identified as a secondary RNA binding protein []. L40 is fused to a ubiquitin protein [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005840 ribosome; PDB: 3IZS_p 3IZR_p 2AYJ_A 4A1B_K 4A19_K 4A18_K 4A1D_K.
Probab=58.16 E-value=4.2 Score=27.32 Aligned_cols=23 Identities=26% Similarity=0.707 Sum_probs=16.5
Q ss_pred cccccccccCCCCCcCCcc--chhh
Q 009183 366 QLCPTCKIIRPVRSKHCPA--CKCC 388 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~~--C~~C 388 (541)
.+|..|...-|+|+..|+. |+.+
T Consensus 18 ~ICrkCyarl~~~A~nCRKkkCGhs 42 (52)
T PF01020_consen 18 MICRKCYARLPPRATNCRKKKCGHS 42 (52)
T ss_dssp EEETTT--EE-TTSSS-TSSSCTS-
T ss_pred eecccccCcCCCCccceecccCCCC
Confidence 6899999999999999998 8764
No 147
>PRK15103 paraquat-inducible membrane protein A; Provisional
Probab=57.64 E-value=2.3e+02 Score=29.10 Aligned_cols=31 Identities=23% Similarity=0.502 Sum_probs=24.3
Q ss_pred cccccccccCCCCCcCCccchhhhhccCCcC
Q 009183 366 QLCPTCKIIRPVRSKHCPACKCCVEQFDHHC 396 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC 396 (541)
..|+.|+..-|....||..|+.-..+..++.
T Consensus 222 ~~C~~Cd~l~~~~~a~CpRC~~~L~~~~~~s 252 (419)
T PRK15103 222 RSCSCCTAILPADQPVCPRCHTKGYVRRRNS 252 (419)
T ss_pred CcCCCCCCCCCCCCCCCCCCCCcCcCCCCCC
Confidence 4699999888877779999988776655553
No 148
>KOG3183 consensus Predicted Zn-finger protein [General function prediction only]
Probab=57.28 E-value=4 Score=37.13 Aligned_cols=12 Identities=33% Similarity=0.393 Sum_probs=9.9
Q ss_pred hhccCCcCceee
Q 009183 389 VEQFDHHCPWIS 400 (541)
Q Consensus 389 V~~~DHHC~wi~ 400 (541)
..+.+|||||..
T Consensus 38 rsye~H~Cp~~~ 49 (250)
T KOG3183|consen 38 RSYESHHCPKGL 49 (250)
T ss_pred chHhhcCCCccc
Confidence 567899999975
No 149
>PF14015 DUF4231: Protein of unknown function (DUF4231)
Probab=57.23 E-value=83 Score=25.14 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=21.1
Q ss_pred HHHHHHHHHHH-hhccchhHHhhhhcccccccC
Q 009183 469 GTTLTSIQAYQ-IARNITTNELANSVRYDYLRG 500 (541)
Q Consensus 469 ~~~l~~~~~~~-i~~n~Tt~E~~~~~~~~~~~~ 500 (541)
.++...+.... -.++++|-|.++..++.|..+
T Consensus 66 ~~~~~~~~~~~~W~~~r~tae~lk~e~~~~~~~ 98 (112)
T PF14015_consen 66 ASLAAFFRFHERWIRYRATAESLKREKWLYLAG 98 (112)
T ss_pred HHHHHHhchhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33333344333 467899999999988887654
No 150
>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]
Probab=54.94 E-value=77 Score=30.83 Aligned_cols=65 Identities=15% Similarity=0.270 Sum_probs=44.0
Q ss_pred CcCCccccccccccccCCCCCcCCccchhhhhccCCcCceeeccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009183 359 IWTGNWSQLCPTCKIIRPVRSKHCPACKCCVEQFDHHCPWISNCVGKRNKRDFFIFLCLGTLTSYLASGIAIHRIW 434 (541)
Q Consensus 359 ~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~ 434 (541)
.++.+....|..|+.=--.+-|||..-++||--.+ .+=.-.|+.+.....+...+.....+...+
T Consensus 117 ~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~N-----------yKfF~lfl~y~~l~~~~~lv~~~~~~~~~~ 181 (307)
T KOG1315|consen 117 CIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRN-----------YKFFLLFLFYTNLYSIYVLVTTLIGFTKYF 181 (307)
T ss_pred cccCCccccchhhhhhhhccccCCcceeceecccc-----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778899997666777899999999997543 345567777776666555444444444443
No 151
>PF00641 zf-RanBP: Zn-finger in Ran binding protein and others; InterPro: IPR001876 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the zinc finger domain found in RanBP2 proteins. Ran is an evolutionary conserved member of the Ras superfamily that regulates all receptor-mediated transport between the nucleus and the cytoplasm. Ran binding protein 2 (RanBP2) is a 358kDa nucleoporin located on the cytoplasmic side of the nuclear pore complex which plays a role in nuclear protein import []. RanBP2 contains multiple zinc fingers which mediate binding to RanGDP []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9G_A 2EBR_A 2WX0_C 2WX1_C 2WWZ_C 3GJ6_B 2LK0_A 2LK1_A 3GJ5_B 3GJ8_B ....
Probab=54.15 E-value=4.8 Score=23.76 Aligned_cols=21 Identities=33% Similarity=1.029 Sum_probs=15.5
Q ss_pred ccccccccCCCCCcCCccchh
Q 009183 367 LCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 367 ~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
.|..|...-++++.+|..|+.
T Consensus 6 ~C~~C~~~N~~~~~~C~~C~~ 26 (30)
T PF00641_consen 6 KCPSCTFMNPASRSKCVACGA 26 (30)
T ss_dssp EETTTTEEEESSSSB-TTT--
T ss_pred cCCCCcCCchHHhhhhhCcCC
Confidence 388898888888888888863
No 152
>PF08600 Rsm1: Rsm1-like; InterPro: IPR013909 This entry contains Nuclear-interacting partner of ALK (NIPA) and NIPA like proteins, as well as mRNA export factor Rsm1, all of which contain a C3HC-type zinc finger. The domain represented in this entry is found C-terminal to the zinc-finger like domain IPR012935 from INTERPRO. Rsm1 is involved in mRNA export from the nucleus []. NIPA is an essential component of an SCF-type E3 ligase complex, SCF(NIPA), a complex that controls mitotic entry by mediating ubiquitination and subsequent degradation of cyclin B1 (CCNB1). Its cell-cycle-dependent phosphorylation regulates the assembly of the SCF(NIPA) complex, restricting CCNB1 ubiquitination activity to interphase. Its inactivation results in nuclear accumulation of CCNB1 in interphase and premature mitotic entry [].
Probab=49.28 E-value=6.6 Score=30.48 Aligned_cols=12 Identities=25% Similarity=0.938 Sum_probs=9.3
Q ss_pred CcCceeeccccC
Q 009183 394 HHCPWISNCVGK 405 (541)
Q Consensus 394 HHC~wi~nCIG~ 405 (541)
.||||++.-...
T Consensus 56 ~~CPwv~~~~q~ 67 (91)
T PF08600_consen 56 EYCPWVNPSTQS 67 (91)
T ss_pred ccCCccCCcccc
Confidence 689999986643
No 153
>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length. This family contains a number of conserved cysteine residues and its function is unknown.
Probab=46.90 E-value=15 Score=25.26 Aligned_cols=35 Identities=37% Similarity=0.865 Sum_probs=27.3
Q ss_pred cccccccCCCCC-------cCCccchhhhhcc-CCcCceeeccccC
Q 009183 368 CPTCKIIRPVRS-------KHCPACKCCVEQF-DHHCPWISNCVGK 405 (541)
Q Consensus 368 C~~C~~~kp~Rs-------~HC~~C~~CV~~~-DHHC~wi~nCIG~ 405 (541)
|..|..--|+-| +-|..|..|+... +++|| ||=|.
T Consensus 8 CE~C~~dLp~~s~~A~ICSfECTFC~~C~e~~l~~~CP---NCgGe 50 (57)
T PF06906_consen 8 CECCDKDLPPDSPEAYICSFECTFCADCAETMLNGVCP---NCGGE 50 (57)
T ss_pred ccccCCCCCCCCCcceEEeEeCcccHHHHHHHhcCcCc---CCCCc
Confidence 666666665554 7799999999998 99999 77665
No 154
>PF12773 DZR: Double zinc ribbon
Probab=46.02 E-value=15 Score=24.56 Aligned_cols=22 Identities=36% Similarity=1.070 Sum_probs=20.0
Q ss_pred ccccccccccCCCCCcCCccch
Q 009183 365 SQLCPTCKIIRPVRSKHCPACK 386 (541)
Q Consensus 365 ~~~C~~C~~~kp~Rs~HC~~C~ 386 (541)
..+|+.|....++.+++|..|+
T Consensus 29 ~~~C~~Cg~~~~~~~~fC~~CG 50 (50)
T PF12773_consen 29 KKICPNCGAENPPNAKFCPNCG 50 (50)
T ss_pred CCCCcCCcCCCcCCcCccCccc
Confidence 4789999999999999999986
No 155
>TIGR00155 pqiA_fam integral membrane protein, PqiA family. This family consists of uncharacterized predicted integral membrane proteins found, so far, only in the Proteobacteria. Of two members in E. coli, one is induced by paraquat and is designated PqiA, paraquat-inducible protein A.
Probab=45.48 E-value=3.5e+02 Score=27.63 Aligned_cols=31 Identities=23% Similarity=0.586 Sum_probs=22.8
Q ss_pred cccccccc-cCCCCCcCCccchhhhhccCCcC
Q 009183 366 QLCPTCKI-IRPVRSKHCPACKCCVEQFDHHC 396 (541)
Q Consensus 366 ~~C~~C~~-~kp~Rs~HC~~C~~CV~~~DHHC 396 (541)
.-|+.|+. .+|....+|..|+.-..|..++.
T Consensus 216 ~~C~~Cd~~~~~~~~a~CpRC~~~L~~~~~~s 247 (403)
T TIGR00155 216 RSCSACHTTILPAQEPVCPRCSTPLYVRRRNS 247 (403)
T ss_pred CcCCCCCCccCCCCCcCCcCCCCcccCCCCCC
Confidence 45999997 55666778999988776655553
No 156
>PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The FYVE zinc finger is named after four proteins that it has been found in: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two zinc ions []. The FYVE finger has eight potential zinc coordinating cysteine positions. Many members of this family also include two histidines in a motif R+HHC+XCG, where + represents a charged residue and X any residue. FYVE-type domains are divided into two known classes: FYVE domains that specifically bind to phosphatidylinositol 3-phosphate in lipid bilayers and FYVE-related domains of undetermined function []. Those that bind to phosphatidylinositol 3-phosphate are often found in proteins targeted to lipid membranes that are involved in regulating membrane traffic [, , ]. Most FYVE domains target proteins to endosomes by binding specifically to phosphatidylinositol-3-phosphate at the membrane surface. By contrast, the CARP2 FYVE-like domain is not optimized to bind to phosphoinositides or insert into lipid bilayers. FYVE domains are distinguished from other zinc fingers by three signature sequences: an N-terminal WxxD motif, a basic R(R/K)HHCR patch, and a C-terminal RVC motif. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0046872 metal ion binding; PDB: 1HYI_A 1JOC_B 1HYJ_A 1DVP_A 3ZYQ_A 4AVX_A 1VFY_A 3T7L_A 1X4U_A 1WFK_A ....
Probab=44.40 E-value=9.7 Score=27.62 Aligned_cols=25 Identities=28% Similarity=0.507 Sum_probs=12.3
Q ss_pred cccccccccc--CCCCCcCCccchhhh
Q 009183 365 SQLCPTCKII--RPVRSKHCPACKCCV 389 (541)
Q Consensus 365 ~~~C~~C~~~--kp~Rs~HC~~C~~CV 389 (541)
...|..|... --.|-|||+.||+.|
T Consensus 9 ~~~C~~C~~~F~~~~rrhhCr~CG~~v 35 (69)
T PF01363_consen 9 ASNCMICGKKFSLFRRRHHCRNCGRVV 35 (69)
T ss_dssp -SB-TTT--B-BSSS-EEE-TTT--EE
T ss_pred CCcCcCcCCcCCCceeeEccCCCCCEE
Confidence 3668888633 257899999998844
No 157
>smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1. The FYVE zinc finger is named after four proteins where it was first found: Fab1, YOTB/ZK632.12, Vac1, and EEA1. The FYVE finger has been shown to bind two Zn2+ ions. The FYVE finger has eight potential zinc coordinating cysteine positions. The FYVE finger is structurally related to the cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=39.81 E-value=2.2e+02 Score=27.75 Aligned_cols=218 Identities=11% Similarity=0.016 Sum_probs=113.3
Q ss_pred CCCcchhhHHHHHHcCCHHHHHHHHHhcCCC--CccCCCCCchHHHHHHHcCcHHHHHHHHhCC-CCC--CCCCCCCchH
Q 009183 22 DNQAAVTDVFSASAYGDFEKLRKFVEEDGAS--VSRPDGNGYFALQWAALNNFADIAQYIIDHG-GDV--NATDNNGQTA 96 (541)
Q Consensus 22 ~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g-~~~--~~~~~~g~tp 96 (541)
.+..|...+..+.+.++.+....++++-..+ .-..|..|.-.+......+..+-.+.+++.- .++ -..+..|.-.
T Consensus 17 ~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~v 96 (322)
T cd07920 17 KDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRV 96 (322)
T ss_pred CCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHH
Confidence 4557778888899998888888887752211 2234667777777777777666544444321 011 1234556666
Q ss_pred HHHHHHhCCHHHHHHHHhC---CCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCC--cccCCCCCCcHHHHHHHhC
Q 009183 97 LHWAAVRGSIAVADVLVQN---GARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHAD--YDASDNEGRSPLHWAAYKG 171 (541)
Q Consensus 97 L~~A~~~g~~~~v~~Ll~~---g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~g~t~L~~A~~~~ 171 (541)
+.-+...+..+-...+++. ....-..|..|...+..+...+..+..+.+++..... .-..+..|...+.-.....
T Consensus 97 lqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G~~vvq~~l~~~ 176 (322)
T cd07920 97 IQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYGCRVIQRCLEHC 176 (322)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccccHHHHHHHHhC
Confidence 6666655554443333332 1111235667777777777766665555544321100 1123455555555555444
Q ss_pred cHH----HHHHHHhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCC-CCCcccCCCCCCHHHHHHhcCc
Q 009183 172 FAD----TIRLLLFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTK-QELTAKDKAGLTPTQLAYDKGH 240 (541)
Q Consensus 172 ~~~----~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~-~~~~~~d~~g~t~l~~A~~~~~ 240 (541)
..+ +++.+... ...-..|..|+..+..+...+..+..+.+++.-.. ...-..++.|...+..+.+.+.
T Consensus 177 ~~~~~~~l~~~l~~~-~~~L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~ 249 (322)
T cd07920 177 SEEQREPLLEEILEH-ALELVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHAS 249 (322)
T ss_pred CHHHHHHHHHHHHHH-HHHHhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCC
Confidence 332 33333221 11123466787778777777765544444332110 0112345666666666655554
No 159
>cd01995 ExsB ExsB is a transcription regulator related protein. It is a subfamily of a Adenosine nucleotide binding superfamily of proteins. This protein family is represented by a single member in nearly every completed large ( 1000 genes) prokaryotic genome. In Rhizobium meliloti, a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA. In Arthrobacter viscosus, the homologous gene is designated ALU1 and is associated with an aluminum tolerance phenotype. The function is unknown
Probab=36.07 E-value=17 Score=31.92 Aligned_cols=22 Identities=27% Similarity=0.564 Sum_probs=16.6
Q ss_pred cccccccCCCCCcCCccchhhhhcc
Q 009183 368 CPTCKIIRPVRSKHCPACKCCVEQF 392 (541)
Q Consensus 368 C~~C~~~kp~Rs~HC~~C~~CV~~~ 392 (541)
..+|... ..+||..|..|+.|+
T Consensus 143 s~sC~~~---~~~~CG~C~~C~~r~ 164 (169)
T cd01995 143 TWSCYNG---GEKHCGECDSCLLRK 164 (169)
T ss_pred eeeccCC---CCCCCCCCHHHHHHH
Confidence 5566654 338999999999884
No 160
>PF00751 DM: DM DNA binding domain; InterPro: IPR001275 This domain was first discovered in the doublesex proteins of Drosophila melanogaster and is also seen in proteins from Caenorhabditis elegans []. In D. melanogaster the doublesex gene controls somatic sexual differentiation by producing alternatively spliced mRNAs encoding related sex-specific polypeptides []. These proteins are believed to function as transcription factors on downstream sex-determination genes, especially on neuroblast differentiation and yolk protein genes transcription [, ]. The DM domain binds DNA as a dimer, allowing the recognition of pseudopalindromic sequences [, , ]. The NMR analysis of the DSX DM domain [] revealed a novel zinc module containing 'intertwined' CCHC and HCCC zinc-binding sites. The recognition of the DNA requires the carboxy-terminal basic tail which contacts the minor groove of the target sequence.; GO: 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0007548 sex differentiation, 0005634 nucleus; PDB: 1LPV_A.
Probab=34.93 E-value=13 Score=24.72 Aligned_cols=22 Identities=32% Similarity=0.674 Sum_probs=8.0
Q ss_pred CcCCccc---hhhhhccCC--cCceee
Q 009183 379 SKHCPAC---KCCVEQFDH--HCPWIS 400 (541)
Q Consensus 379 s~HC~~C---~~CV~~~DH--HC~wi~ 400 (541)
+.+|..| +.-+..-+| +|||-+
T Consensus 2 ~p~C~RCrnHG~~~~lKgHk~~C~~~~ 28 (47)
T PF00751_consen 2 SPTCARCRNHGVIVPLKGHKRYCPFRD 28 (47)
T ss_dssp -SS-HHHHTTT---TTTT-GGG-TTTT
T ss_pred CCcCcchhcCCcccchhhhccccCcCC
Confidence 3445555 345555566 577743
No 161
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=33.18 E-value=13 Score=38.91 Aligned_cols=47 Identities=17% Similarity=0.084 Sum_probs=25.7
Q ss_pred CCcHHHHHHHhCcHHHHHHHHhcCCCCCcccCCCCcHHHHHHHcCCH
Q 009183 160 GRSPLHWAAYKGFADTIRLLLFRDASQGRQDKDGCTPLHWAALRGNV 206 (541)
Q Consensus 160 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~ 206 (541)
..++++........+.+..++..+......+..|.|+||.+...++.
T Consensus 136 ~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~ 182 (503)
T KOG0513|consen 136 LNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL 182 (503)
T ss_pred cccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc
Confidence 34555555555555555555554444444555566666666655554
No 162
>KOG1729 consensus FYVE finger containing protein [General function prediction only]
Probab=31.20 E-value=16 Score=34.99 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=20.9
Q ss_pred ccccccccccc-C--CCCCcCCccchhhhhc
Q 009183 364 WSQLCPTCKII-R--PVRSKHCPACKCCVEQ 391 (541)
Q Consensus 364 ~~~~C~~C~~~-k--p~Rs~HC~~C~~CV~~ 391 (541)
....|..|... . -.|=|||+.||+-|=.
T Consensus 167 ea~~C~~C~~~~Ftl~~RRHHCR~CG~ivC~ 197 (288)
T KOG1729|consen 167 EATECMVCGCTEFTLSERRHHCRNCGDIVCA 197 (288)
T ss_pred cceecccCCCccccHHHHHHHHHhcchHhhh
Confidence 34678888773 2 5789999999986654
No 163
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=30.75 E-value=90 Score=21.98 Aligned_cols=22 Identities=27% Similarity=0.763 Sum_probs=18.5
Q ss_pred cccccccccCCCCCcCCc-cchh
Q 009183 366 QLCPTCKIIRPVRSKHCP-ACKC 387 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs~HC~-~C~~ 387 (541)
+-|..|...-|+--..|+ .|+.
T Consensus 4 kHC~~CG~~Ip~~~~fCS~~C~~ 26 (59)
T PF09889_consen 4 KHCPVCGKPIPPDESFCSPKCRE 26 (59)
T ss_pred CcCCcCCCcCCcchhhhCHHHHH
Confidence 679999999998888996 7765
No 164
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=30.70 E-value=65 Score=33.32 Aligned_cols=162 Identities=17% Similarity=0.209 Sum_probs=76.0
Q ss_pred hHHHHHHcCCHHHHHHHHHhcCCCCccCCCCCchHHHHHHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHH
Q 009183 29 DVFSASAYGDFEKLRKFVEEDGASVSRPDGNGYFALQWAALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAV 108 (541)
Q Consensus 29 ~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~ 108 (541)
-...|+.+++.+.+..++......++.+...|.....+--..|.+++.-.+.. +-.+=+.+|.+.|+++.
T Consensus 267 ~fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~----------D~~~rFeLAl~lg~L~~ 336 (443)
T PF04053_consen 267 EFKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT----------DPDHRFELALQLGNLDI 336 (443)
T ss_dssp HHHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS-----------HHHHHHHHHHCT-HHH
T ss_pred HHHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC----------ChHHHhHHHHhcCCHHH
Confidence 35789999999998777764333333333344444444444555554433321 22466777888888877
Q ss_pred HHHHHhCCCCCCccccCCChHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHhcCCCCCc
Q 009183 109 ADVLVQNGARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKYHADYDASDNEGRSPLHWAAYKGFADTIRLLLFRDASQGR 188 (541)
Q Consensus 109 v~~Ll~~g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 188 (541)
+.-+.+...+... -...-..|...|+.++++.=.++. .+. ...+.+....|+.+-++.|.+.- .
T Consensus 337 A~~~a~~~~~~~~----W~~Lg~~AL~~g~~~lAe~c~~k~-~d~-------~~L~lLy~~~g~~~~L~kl~~~a----~ 400 (443)
T PF04053_consen 337 ALEIAKELDDPEK----WKQLGDEALRQGNIELAEECYQKA-KDF-------SGLLLLYSSTGDREKLSKLAKIA----E 400 (443)
T ss_dssp HHHHCCCCSTHHH----HHHHHHHHHHTTBHHHHHHHHHHC-T-H-------HHHHHHHHHCT-HHHHHHHHHHH----H
T ss_pred HHHHHHhcCcHHH----HHHHHHHHHHcCCHHHHHHHHHhh-cCc-------cccHHHHHHhCCHHHHHHHHHHH----H
Confidence 7766654322211 111223455667777776655541 111 13444555566665555554210 0
Q ss_pred ccCCCCcHHHHHHHcCCH-HHHHHHHHcC
Q 009183 189 QDKDGCTPLHWAALRGNV-EACTVLVHAG 216 (541)
Q Consensus 189 ~d~~g~tpLh~A~~~g~~-~~v~~Ll~~g 216 (541)
...+-+.+++.|...|+. ++++.|++.|
T Consensus 401 ~~~~~n~af~~~~~lgd~~~cv~lL~~~~ 429 (443)
T PF04053_consen 401 ERGDINIAFQAALLLGDVEECVDLLIETG 429 (443)
T ss_dssp HTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred HccCHHHHHHHHHHcCCHHHHHHHHHHcC
Confidence 111123456666655553 4556666554
No 165
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=29.86 E-value=5.2e+02 Score=25.04 Aligned_cols=219 Identities=12% Similarity=0.025 Sum_probs=114.8
Q ss_pred CcchhhHHHHHHcCCHHHHHHHHHhcCCC--CccCCCCCchHHHHHHHcCcHHHHHHHHhCC---CCCCCCCCCCchHHH
Q 009183 24 QAAVTDVFSASAYGDFEKLRKFVEEDGAS--VSRPDGNGYFALQWAALNNFADIAQYIIDHG---GDVNATDNNGQTALH 98 (541)
Q Consensus 24 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~t~Lh~A~~~~~~~iv~~Ll~~g---~~~~~~~~~g~tpL~ 98 (541)
..|...+-...+.+..+....+++.-..+ .-..|..|.-.+..+...+..+-...+++.- ...-..|..|...+.
T Consensus 55 ~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~~~~~~L~~d~~gn~Vvq 134 (322)
T cd07920 55 PFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKELRGHVVELVKDQNGNHVIQ 134 (322)
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHHHCHHHHhhcccccHHHH
Confidence 34445555555666555555444432111 1134566766666666666544444443321 111134566777777
Q ss_pred HHHHhCCHHHHHHHHhC----CCCCCccccCCChHHHHHHHcCCHHHHHHHHHhc--CCCcccCCCCCCcHHHHHHHhCc
Q 009183 99 WAAVRGSIAVADVLVQN----GARVEAADVHGYRAVHVAAQYGQTSFLNHIVAKY--HADYDASDNEGRSPLHWAAYKGF 172 (541)
Q Consensus 99 ~A~~~g~~~~v~~Ll~~----g~~~~~~d~~g~t~l~~A~~~g~~~~v~~Ll~~~--~~~~~~~d~~g~t~L~~A~~~~~ 172 (541)
.+...++.+..+.+++. -.++ ..+..|...+.........+..+.+++.. ....-..|..|...+..+...+.
T Consensus 135 ~~l~~~~~~~~~~i~~~l~~~~~~l-~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~~~~~L~~d~~Gn~vvq~~l~~~~ 213 (322)
T cd07920 135 KCIEKFPPEDLQFIIDAFKGNCVAL-STHPYGCRVIQRCLEHCSEEQREPLLEEILEHALELVQDQFGNYVVQHVLELGD 213 (322)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHH-HcCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHhcCC
Confidence 77776666555554432 1111 24567777777777665554433333211 11122457788888888888776
Q ss_pred HHHHHHHHhc---CCCCCcccCCCCcHHHHHHHcCCHH----HHHHHHHcCC---CCCCcccCCCCCCHHHHHHhcCchH
Q 009183 173 ADTIRLLLFR---DASQGRQDKDGCTPLHWAALRGNVE----ACTVLVHAGT---KQELTAKDKAGLTPTQLAYDKGHRQ 242 (541)
Q Consensus 173 ~~~v~~Ll~~---g~~~~~~d~~g~tpLh~A~~~g~~~----~v~~Ll~~g~---~~~~~~~d~~g~t~l~~A~~~~~~~ 242 (541)
.+..+.+++. ....-..+..|...+..+...+..+ +++.++.... ...--..|..|.-.++.+......+
T Consensus 214 ~~~~~~i~~~l~~~~~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~~~~~~~~l~~l~~d~~Gn~Viq~~l~~~~~~ 293 (322)
T cd07920 214 PDDTSRIIEKLLGNIVQLSCHKFASNVVEKCLKHASKEERELIIDEILASGNETSALDTLMKDQYGNYVIQTALDVAKEE 293 (322)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhcCCCchhHHHHHhCCCcccHHHHHHHHhCCHH
Confidence 5444433321 0111235667888888888777543 4444443320 0112345677777777766665544
Q ss_pred H
Q 009183 243 V 243 (541)
Q Consensus 243 i 243 (541)
.
T Consensus 294 ~ 294 (322)
T cd07920 294 Q 294 (322)
T ss_pred H
Confidence 3
No 166
>PF02150 RNA_POL_M_15KD: RNA polymerases M/15 Kd subunit; InterPro: IPR001529 DNA-directed RNA polymerases 2.7.7.6 from EC (also known as DNA-dependent RNA polymerases) are responsible for the polymerisation of ribonucleotides into a sequence complementary to the template DNA. In eukaryotes, there are three different forms of DNA-directed RNA polymerases transcribing different sets of genes. Most RNA polymerases are multimeric enzymes and are composed of a variable number of subunits. The core RNA polymerase complex consists of five subunits (two alpha, one beta, one beta-prime and one omega) and is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. The core RNA polymerase complex forms a "crab claw"-like structure with an internal channel running along the full length []. The key functional sites of the enzyme, as defined by mutational and cross-linking analysis, are located on the inner wall of this channel. RNA synthesis follows after the attachment of RNA polymerase to a specific site, the promoter, on the template DNA strand. The RNA synthesis process continues until a termination sequence is reached. The RNA product, which is synthesised in the 5' to 3'direction, is known as the primary transcript. Eukaryotic nuclei contain three distinct types of RNA polymerases that differ in the RNA they synthesise: RNA polymerase I: located in the nucleoli, synthesises precursors of most ribosomal RNAs. RNA polymerase II: occurs in the nucleoplasm, synthesises mRNA precursors. RNA polymerase III: also occurs in the nucleoplasm, synthesises the precursors of 5S ribosomal RNA, the tRNAs, and a variety of other small nuclear and cytosolic RNAs. Eukaryotic cells are also known to contain separate mitochondrial and chloroplast RNA polymerases. Eukaryotic RNA polymerases, whose molecular masses vary in size from 500 to 700 kDa, contain two non-identical large (>100 kDa) subunits and an array of up to 12 different small (less than 50 kDa) subunits. In archaebacteria, there is generally a single form of RNA polymerase which also consist of an oligomeric assemblage of 10 to 13 polypeptides. It has recently been shown [], [] that small subunits of about 15 kDa, found in polymerase types I and II, are highly conserved. These proteins contain a probable zinc finger in their N-terminal region and a C-terminal zinc ribbon domain (see IPR001222 from INTERPRO).; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 3H0G_I 3M4O_I 3S14_I 2E2J_I 4A3J_I 3HOZ_I 1TWA_I 3S1Q_I 3S1N_I 1TWG_I ....
Probab=29.57 E-value=13 Score=22.90 Aligned_cols=8 Identities=38% Similarity=1.252 Sum_probs=5.1
Q ss_pred cccccccc
Q 009183 366 QLCPTCKI 373 (541)
Q Consensus 366 ~~C~~C~~ 373 (541)
+||++|..
T Consensus 2 ~FCp~C~n 9 (35)
T PF02150_consen 2 RFCPECGN 9 (35)
T ss_dssp -BETTTTS
T ss_pred eeCCCCCc
Confidence 57888863
No 167
>PF01437 PSI: Plexin repeat; InterPro: IPR002165 This is a cysteine rich repeat found in several different extracellular receptors. The function of the repeat is unknown. Three copies of the repeat are found in plexin (P70206 from SWISSPROT) []. Two copies of the repeat are found in mahogany protein. A related Caenorhabditis elegans protein (Q19981 from SWISSPROT) contains four copies of the repeat, while the Met receptor contains a single copy of the repeat.; GO: 0016020 membrane; PDB: 3NVQ_B 3NVN_B 3OL2_B 3OKT_A 3AL8_A 3OKW_A 3OKY_B 3AFC_B 1OLZ_B 1SHY_B ....
Probab=28.95 E-value=24 Score=23.83 Aligned_cols=18 Identities=33% Similarity=0.925 Sum_probs=13.2
Q ss_pred ccchhhhhccCCcCceee
Q 009183 383 PACKCCVEQFDHHCPWIS 400 (541)
Q Consensus 383 ~~C~~CV~~~DHHC~wi~ 400 (541)
..|..|+.-.|-+|.|-.
T Consensus 6 ~sC~~Cl~~~dp~CgWc~ 23 (51)
T PF01437_consen 6 TSCSSCLSSRDPYCGWCS 23 (51)
T ss_dssp SSHHHHHHSTCTTEEEET
T ss_pred CcHHHHHcCCCcCccccC
Confidence 567778877777777753
No 168
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=28.83 E-value=49 Score=30.19 Aligned_cols=39 Identities=26% Similarity=0.076 Sum_probs=26.6
Q ss_pred HhcCCCCCcccCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 009183 180 LFRDASQGRQDKDGCTPLHWAALRGNVEACTVLVHAGTK 218 (541)
Q Consensus 180 l~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~ 218 (541)
++.|+.-|..|....||=.+|..+++.+..+.|++.|+.
T Consensus 2 le~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 2 LEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred cccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 455666666666667777777777777777777776654
No 169
>PF09297 zf-NADH-PPase: NADH pyrophosphatase zinc ribbon domain; InterPro: IPR015376 This domain has a zinc ribbon structure and is often found between two NUDIX domains.; GO: 0016787 hydrolase activity, 0046872 metal ion binding; PDB: 1VK6_A 2GB5_A.
Probab=28.39 E-value=22 Score=21.28 Aligned_cols=22 Identities=23% Similarity=0.732 Sum_probs=10.4
Q ss_pred ccccccccccC----CCCCcCCccch
Q 009183 365 SQLCPTCKIIR----PVRSKHCPACK 386 (541)
Q Consensus 365 ~~~C~~C~~~k----p~Rs~HC~~C~ 386 (541)
.+||..|-..- ..++..|..|+
T Consensus 3 ~rfC~~CG~~t~~~~~g~~r~C~~Cg 28 (32)
T PF09297_consen 3 HRFCGRCGAPTKPAPGGWARRCPSCG 28 (32)
T ss_dssp TSB-TTT--BEEE-SSSS-EEESSSS
T ss_pred CcccCcCCccccCCCCcCEeECCCCc
Confidence 37888885432 33555665554
No 170
>smart00547 ZnF_RBZ Zinc finger domain. Zinc finger domain in Ran-binding proteins (RanBPs), and other proteins. In RanBPs, this domain binds RanGDP.
Probab=28.36 E-value=26 Score=19.60 Aligned_cols=21 Identities=29% Similarity=0.797 Sum_probs=17.3
Q ss_pred ccccccccCCCCCcCCccchh
Q 009183 367 LCPTCKIIRPVRSKHCPACKC 387 (541)
Q Consensus 367 ~C~~C~~~kp~Rs~HC~~C~~ 387 (541)
.|..|...-.+++..|..|+.
T Consensus 4 ~C~~C~~~N~~~~~~C~~C~~ 24 (26)
T smart00547 4 ECPACTFLNFASRSKCFACGA 24 (26)
T ss_pred cCCCCCCcChhhhccccccCC
Confidence 488898888888888888864
No 171
>PF07282 OrfB_Zn_ribbon: Putative transposase DNA-binding domain; InterPro: IPR010095 This entry represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by IPR001959 from INTERPRO, and other proteins. More information about these proteins can be found at Protein of the Month: Transposase [].
Probab=28.22 E-value=27 Score=25.27 Aligned_cols=24 Identities=38% Similarity=0.697 Sum_probs=17.4
Q ss_pred ccccccccccCC----CCCcCCccchhh
Q 009183 365 SQLCPTCKIIRP----VRSKHCPACKCC 388 (541)
Q Consensus 365 ~~~C~~C~~~kp----~Rs~HC~~C~~C 388 (541)
++.|+.|..... .|..+|..|+.-
T Consensus 28 Sq~C~~CG~~~~~~~~~r~~~C~~Cg~~ 55 (69)
T PF07282_consen 28 SQTCPRCGHRNKKRRSGRVFTCPNCGFE 55 (69)
T ss_pred ccCccCcccccccccccceEEcCCCCCE
Confidence 578999976554 477888887753
No 172
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=28.15 E-value=47 Score=29.60 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=31.5
Q ss_pred CCCCcHHHHHHHcCCHHHHH-HHHHcCCC--CCCcccCCCCCCHHHHHHhcC
Q 009183 191 KDGCTPLHWAALRGNVEACT-VLVHAGTK--QELTAKDKAGLTPTQLAYDKG 239 (541)
Q Consensus 191 ~~g~tpLh~A~~~g~~~~v~-~Ll~~g~~--~~~~~~d~~g~t~l~~A~~~~ 239 (541)
..-..|||-|+.-++.+++- ++++..++ ..++..|.+|-.+|++|..+.
T Consensus 220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 33456888888887777653 44555442 235666778888888876543
No 173
>smart00661 RPOL9 RNA polymerase subunit 9.
Probab=27.72 E-value=29 Score=23.31 Aligned_cols=20 Identities=25% Similarity=0.708 Sum_probs=10.2
Q ss_pred ccccccccCCCC------CcCCccch
Q 009183 367 LCPTCKIIRPVR------SKHCPACK 386 (541)
Q Consensus 367 ~C~~C~~~kp~R------s~HC~~C~ 386 (541)
||+.|.....++ -..|+.|+
T Consensus 2 FCp~Cg~~l~~~~~~~~~~~vC~~Cg 27 (52)
T smart00661 2 FCPKCGNMLIPKEGKEKRRFVCRKCG 27 (52)
T ss_pred CCCCCCCccccccCCCCCEEECCcCC
Confidence 566665444332 23466665
No 174
>PF07010 Endomucin: Endomucin; InterPro: IPR010740 This family consists of several mammalian endomucin proteins. Endomucin is an early endothelial-specific antigen that is also expressed on putative hematopoietic progenitor cells.
Probab=26.68 E-value=1.6e+02 Score=26.91 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=14.6
Q ss_pred HHHHHHhhccCCCcccCCCCCCC
Q 009183 319 LIMFYRCSSKDPGYIKRSQDIDN 341 (541)
Q Consensus 319 ~~~~~~~~~~dPG~~~~~~~~~~ 341 (541)
+-+|..+...|||........++
T Consensus 208 vgLyr~C~k~dPg~p~~g~~qpq 230 (259)
T PF07010_consen 208 VGLYRMCWKTDPGTPENGPDQPQ 230 (259)
T ss_pred HHHHHHhhcCCCCCcccCCCCCC
Confidence 34455588899997665544333
No 175
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]
Probab=26.43 E-value=67 Score=29.91 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=31.0
Q ss_pred HHHHHhhccCCCcccCCCCCCCCCCCCCccccccCCCCCCcCCccccccccccccC----------CCCCcCCccchhhh
Q 009183 320 IMFYRCSSKDPGYIKRSQDIDNHTDSEDPLLTIDLNNSPIWTGNWSQLCPTCKIIR----------PVRSKHCPACKCCV 389 (541)
Q Consensus 320 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~k----------p~Rs~HC~~C~~CV 389 (541)
|--.+-...++|.+|... +.|.-|++.- +..-.+|+.|+|-.
T Consensus 180 yeri~~~~kg~gvvpl~g----------------------------~~C~GC~m~l~~~~~~~V~~~d~iv~CP~CgRIL 231 (239)
T COG1579 180 YERIRKNKKGVGVVPLEG----------------------------RVCGGCHMKLPSQTLSKVRKKDEIVFCPYCGRIL 231 (239)
T ss_pred HHHHHhcCCCceEEeecC----------------------------CcccCCeeeecHHHHHHHhcCCCCccCCccchHH
Confidence 334445566899988642 5688887654 46788999999976
Q ss_pred hcc
Q 009183 390 EQF 392 (541)
Q Consensus 390 ~~~ 392 (541)
.+-
T Consensus 232 y~~ 234 (239)
T COG1579 232 YYD 234 (239)
T ss_pred Hhh
Confidence 543
No 176
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=25.74 E-value=1.8e+02 Score=27.23 Aligned_cols=28 Identities=32% Similarity=0.513 Sum_probs=15.7
Q ss_pred cccC-CchHHHHHHHHHHHHHHHHHHHHH
Q 009183 402 CVGK-RNKRDFFIFLCLGTLTSYLASGIA 429 (541)
Q Consensus 402 CIG~-~N~~~F~~fl~~~~~~~~~~~~~~ 429 (541)
-||. ...|-.++|+++..+..+..+.++
T Consensus 188 SVG~~faRkR~i~f~llgllfliiaiglt 216 (256)
T PF09788_consen 188 SVGPRFARKRAIIFFLLGLLFLIIAIGLT 216 (256)
T ss_pred cccchHhhhHHHHHHHHHHHHHHHHHHHh
Confidence 3774 555666666666555555544443
No 177
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=25.18 E-value=61 Score=29.60 Aligned_cols=40 Identities=23% Similarity=0.249 Sum_probs=33.7
Q ss_pred HHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhCCCC
Q 009183 79 IIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQNGAR 118 (541)
Q Consensus 79 Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~ 118 (541)
|+++|+--|..|....|+=.+|.++++.+.-+.|++.|+.
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 4577888888888888999999999999999999988764
No 178
>PLN00186 ribosomal protein S26; Provisional
Probab=23.88 E-value=28 Score=27.59 Aligned_cols=15 Identities=27% Similarity=0.702 Sum_probs=12.4
Q ss_pred CCcCCccchhhhhcc
Q 009183 378 RSKHCPACKCCVEQF 392 (541)
Q Consensus 378 Rs~HC~~C~~CV~~~ 392 (541)
+.-||..|++||.+=
T Consensus 19 ~~V~C~nCgr~vPKD 33 (109)
T PLN00186 19 KRIRCSNCGKCVPKD 33 (109)
T ss_pred cceeeCCCccccccc
Confidence 456899999999973
No 179
>TIGR00364 exsB protein. This protein family is represented by a single member in nearly every completed large ( 1000 genes) prokaryotic genome. In Rhizobium meliloti, a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA. In Arthrobacter viscosus, the homologous gene is designated ALU1 and is associated with an aluminum tolerance phenotype. The function is unknown.
Probab=23.52 E-value=42 Score=30.41 Aligned_cols=13 Identities=23% Similarity=0.833 Sum_probs=11.3
Q ss_pred CcCCccchhhhhc
Q 009183 379 SKHCPACKCCVEQ 391 (541)
Q Consensus 379 s~HC~~C~~CV~~ 391 (541)
.+||..|..|+.|
T Consensus 189 ~~~CG~C~~C~~r 201 (201)
T TIGR00364 189 GEGCGKCPSCMLR 201 (201)
T ss_pred CCCCCCChhhhcc
Confidence 4699999999876
No 180
>smart00423 PSI domain found in Plexins, Semaphorins and Integrins.
Probab=23.51 E-value=46 Score=21.77 Aligned_cols=16 Identities=31% Similarity=0.897 Sum_probs=8.3
Q ss_pred cchhhhhccCCcCcee
Q 009183 384 ACKCCVEQFDHHCPWI 399 (541)
Q Consensus 384 ~C~~CV~~~DHHC~wi 399 (541)
.|..||...|-||.|=
T Consensus 6 sC~~C~~~~~~~C~Wc 21 (46)
T smart00423 6 SCSECLLARDPYCAWC 21 (46)
T ss_pred cHHHHHcCCCCCCCcc
Confidence 4555555555555553
No 181
>PF07649 C1_3: C1-like domain; InterPro: IPR011424 This short domain is rich in cysteines and histidines. The pattern of conservation is similar to that found in IPR002219 from INTERPRO. C1 domains are protein kinase C-like zinc finger structures. Diacylglycerol (DAG) kinases (DGKs) have a two or three commonly conserved cysteine-rich C1 domains []. DGKs modulate the balance between the two signaling lipids, DAG and phosphatidic acid (PA), by phosphorylating DAG to yield PA []. The PKD (protein kinase D) family are novel DAG receptors. They have twin C1 domains, designated C1a and C1b, which bind DAG or phorbol esters. Individual C1 domains differ in ligand-binding activity and selectivity []. ; GO: 0047134 protein-disulfide reductase activity, 0055114 oxidation-reduction process; PDB: 1V5N_A.
Probab=23.32 E-value=28 Score=20.41 Aligned_cols=21 Identities=19% Similarity=0.409 Sum_probs=8.7
Q ss_pred ccccccccCCC-CCcCCccchh
Q 009183 367 LCPTCKIIRPV-RSKHCPACKC 387 (541)
Q Consensus 367 ~C~~C~~~kp~-Rs~HC~~C~~ 387 (541)
.|..|...... ...+|..|+-
T Consensus 2 ~C~~C~~~~~~~~~Y~C~~Cdf 23 (30)
T PF07649_consen 2 RCDACGKPIDGGWFYRCSECDF 23 (30)
T ss_dssp --TTTS----S--EEE-TTT--
T ss_pred cCCcCCCcCCCCceEECccCCC
Confidence 37777776666 7888888864
No 182
>PF06508 QueC: Queuosine biosynthesis protein QueC; InterPro: IPR018317 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Rhizobium meliloti (Sinorhizobium meliloti), a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA [, ]. In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance []. The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr [].; PDB: 3BL5_B 2PG3_A.
Probab=22.90 E-value=41 Score=30.75 Aligned_cols=25 Identities=32% Similarity=0.735 Sum_probs=16.8
Q ss_pred cccccccccCC-CCCcCCccchhhhhcc
Q 009183 366 QLCPTCKIIRP-VRSKHCPACKCCVEQF 392 (541)
Q Consensus 366 ~~C~~C~~~kp-~Rs~HC~~C~~CV~~~ 392 (541)
..-++| +++ .+..||..|..|+.|.
T Consensus 178 ~~T~SC--y~~~~~~~~CG~C~~C~~R~ 203 (209)
T PF06508_consen 178 ELTWSC--YRGGEKGKHCGRCPSCLLRR 203 (209)
T ss_dssp HH-B-S--TTS--BTTTTSSSHHHHHHH
T ss_pred HHccCC--CCCCCCCCCCCCCHHHHHHH
Confidence 345666 455 4568999999999984
No 183
>cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1;
Probab=22.51 E-value=36 Score=23.35 Aligned_cols=23 Identities=26% Similarity=0.554 Sum_probs=16.1
Q ss_pred cccccccc--cCCCCCcCCccchhh
Q 009183 366 QLCPTCKI--IRPVRSKHCPACKCC 388 (541)
Q Consensus 366 ~~C~~C~~--~kp~Rs~HC~~C~~C 388 (541)
+.|..|.. -.-.|.|||+.|++-
T Consensus 3 ~~C~~C~~~F~~~~rk~~Cr~Cg~~ 27 (57)
T cd00065 3 SSCMGCGKPFTLTRRRHHCRNCGRI 27 (57)
T ss_pred CcCcccCccccCCccccccCcCcCC
Confidence 34777753 235789999999874
No 184
>PF12514 DUF3718: Protein of unknown function (DUF3718); InterPro: IPR022193 This entry is represented by Bacteriophage Aaphi23, Orf19. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important.
Probab=22.42 E-value=1.1e+02 Score=22.17 Aligned_cols=48 Identities=25% Similarity=0.236 Sum_probs=27.3
Q ss_pred HHHHcCCHHHHHHHHHhcCCCCcc----CCCCCchHHHHHHHcCcHHHHHHH
Q 009183 32 SASAYGDFEKLRKFVEEDGASVSR----PDGNGYFALQWAALNNFADIAQYI 79 (541)
Q Consensus 32 ~A~~~g~~~~v~~ll~~~~~~~~~----~d~~g~t~Lh~A~~~~~~~iv~~L 79 (541)
.|+..++.-.+++.+.+....... ..=+|.+.+..|..+|..++.++|
T Consensus 3 ~av~sd~~~~lrk~lk~~ri~~r~i~~~l~CNG~sl~~FA~~~~A~kt~~~l 54 (68)
T PF12514_consen 3 KAVASDDKNRLRKTLKDYRINKRNIYDGLVCNGESLLRFAASYGANKTAEFL 54 (68)
T ss_pred eeeecCCHHHHHHHHHHhCccHhhcccCCeECCcCHHHHHHHcCHHHHHHHH
Confidence 455566666666666654443211 112566666666666666666666
No 185
>COG0603 Predicted PP-loop superfamily ATPase [General function prediction only]
Probab=22.33 E-value=43 Score=30.75 Aligned_cols=19 Identities=26% Similarity=0.604 Sum_probs=15.4
Q ss_pred cCCCCCcCCccchhhhhcc
Q 009183 374 IRPVRSKHCPACKCCVEQF 392 (541)
Q Consensus 374 ~kp~Rs~HC~~C~~CV~~~ 392 (541)
+++.+-.||..|..|+.|.
T Consensus 187 Y~g~~~~~CG~C~sC~~R~ 205 (222)
T COG0603 187 YNGGEGDHCGECESCVLRE 205 (222)
T ss_pred eCCCCCCCCCCCHHHHHHH
Confidence 5666666999999999984
No 186
>smart00301 DM Doublesex DNA-binding motif.
Probab=22.00 E-value=41 Score=23.14 Aligned_cols=6 Identities=33% Similarity=1.176 Sum_probs=3.9
Q ss_pred cCceee
Q 009183 395 HCPWIS 400 (541)
Q Consensus 395 HC~wi~ 400 (541)
+|||-+
T Consensus 23 ~C~~r~ 28 (54)
T smart00301 23 ECPFRD 28 (54)
T ss_pred CCCCCC
Confidence 677754
No 187
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=21.69 E-value=20 Score=37.57 Aligned_cols=49 Identities=31% Similarity=0.441 Sum_probs=28.6
Q ss_pred HHHcCcHHHHHHHHhCCCCCCCCCCCCchHHHHHHHhCCHHHHHHHHhC
Q 009183 67 AALNNFADIAQYIIDHGGDVNATDNNGQTALHWAAVRGSIAVADVLVQN 115 (541)
Q Consensus 67 A~~~~~~~iv~~Ll~~g~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 115 (541)
|+.++....+-.|++.++.++..+..+.+|+|+++..|..++.+.++..
T Consensus 403 ~~~~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~ 451 (605)
T KOG3836|consen 403 AALNNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNC 451 (605)
T ss_pred hhhcCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhh
Confidence 3344444444445555666666666666666666666666666665554
No 188
>PRK09335 30S ribosomal protein S26e; Provisional
Probab=21.50 E-value=31 Score=26.69 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=16.3
Q ss_pred CCcCCccchhhhhccCCcCce
Q 009183 378 RSKHCPACKCCVEQFDHHCPW 398 (541)
Q Consensus 378 Rs~HC~~C~~CV~~~DHHC~w 398 (541)
+.-+|..|++||.+----+.+
T Consensus 19 ~~V~C~nCgr~vPKDKAIkrf 39 (95)
T PRK09335 19 GYVQCDNCGRRVPRDKAVCVT 39 (95)
T ss_pred ccEEeCCCCCcCcCCceEEEE
Confidence 456899999999986666554
No 189
>KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=21.27 E-value=38 Score=36.09 Aligned_cols=22 Identities=27% Similarity=0.720 Sum_probs=17.6
Q ss_pred cccccccccC--CCCCcCCccchh
Q 009183 366 QLCPTCKIIR--PVRSKHCPACKC 387 (541)
Q Consensus 366 ~~C~~C~~~k--p~Rs~HC~~C~~ 387 (541)
.-|..|...= -.|+|||+.||+
T Consensus 166 ~~C~rCr~~F~~~~rkHHCr~CG~ 189 (634)
T KOG1818|consen 166 EECLRCRVKFGLTNRKHHCRNCGQ 189 (634)
T ss_pred cccceeeeeeeeccccccccccch
Confidence 5699997543 459999999998
No 190
>PRK05978 hypothetical protein; Provisional
Probab=21.12 E-value=3.6e+02 Score=23.08 Aligned_cols=30 Identities=37% Similarity=0.777 Sum_probs=18.0
Q ss_pred cccccccccCCCCC--cCCccchhhhhccCCc
Q 009183 366 QLCPTCKIIRPVRS--KHCPACKCCVEQFDHH 395 (541)
Q Consensus 366 ~~C~~C~~~kp~Rs--~HC~~C~~CV~~~DHH 395 (541)
.-|+.|..=|--|+ |-=..|..|=++|.||
T Consensus 34 grCP~CG~G~LF~g~Lkv~~~C~~CG~~~~~~ 65 (148)
T PRK05978 34 GRCPACGEGKLFRAFLKPVDHCAACGEDFTHH 65 (148)
T ss_pred CcCCCCCCCcccccccccCCCccccCCccccC
Confidence 45999987776332 1222344444788888
No 191
>KOG1398 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.99 E-value=50 Score=32.70 Aligned_cols=26 Identities=31% Similarity=0.770 Sum_probs=19.5
Q ss_pred CCCCCcCCccchhhhhccCCcCceeeccccCC
Q 009183 375 RPVRSKHCPACKCCVEQFDHHCPWISNCVGKR 406 (541)
Q Consensus 375 kp~Rs~HC~~C~~CV~~~DHHC~wi~nCIG~~ 406 (541)
+-.|-.||..|+. +|| +|+.||||..
T Consensus 10 sl~~p~l~~tC~e----~~h--~w~~~c~ga~ 35 (460)
T KOG1398|consen 10 SLARPSLAETCDE----ADH--SWVANCIGAL 35 (460)
T ss_pred hhcCchHhhhhhh----ccC--CcccchhHHH
Confidence 4456678888864 677 7999999974
No 192
>PRK00432 30S ribosomal protein S27ae; Validated
Probab=20.87 E-value=54 Score=22.16 Aligned_cols=22 Identities=27% Similarity=0.780 Sum_probs=13.9
Q ss_pred ccccccccc-cCCC--CCcCCccch
Q 009183 365 SQLCPTCKI-IRPV--RSKHCPACK 386 (541)
Q Consensus 365 ~~~C~~C~~-~kp~--Rs~HC~~C~ 386 (541)
.++|+.|.. ...+ -..+|..|+
T Consensus 20 ~~fCP~Cg~~~m~~~~~r~~C~~Cg 44 (50)
T PRK00432 20 NKFCPRCGSGFMAEHLDRWHCGKCG 44 (50)
T ss_pred cCcCcCCCcchheccCCcEECCCcC
Confidence 368999976 3222 255677765
No 193
>PTZ00172 40S ribosomal protein S26; Provisional
Probab=20.68 E-value=33 Score=27.17 Aligned_cols=15 Identities=27% Similarity=0.738 Sum_probs=12.3
Q ss_pred CCcCCccchhhhhcc
Q 009183 378 RSKHCPACKCCVEQF 392 (541)
Q Consensus 378 Rs~HC~~C~~CV~~~ 392 (541)
+.-||..|++||.+=
T Consensus 19 ~~V~C~nCgr~vPKD 33 (108)
T PTZ00172 19 KPVRCSNCGRCVPKD 33 (108)
T ss_pred ccEEeCCcccccccc
Confidence 356899999999973
Done!