Your job contains 1 sequence.
>009188
MARPLPSEGDEDVIGPAGVIKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNL
FTQQILDGHWDESLATLSKIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEI
APLCIKNSRVRELSSCIVSPPKCVVVCSPKQDIVRAKSRPKLLEELQKLLPPMIMIPERR
LEHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFS
HNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAV
RRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRT
LKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLL
NQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL
IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDCHSNGVHYCNGGT
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009188
(540 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 1782 1.1e-183 1
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 1011 6.8e-117 2
UNIPROTKB|F1P3E7 - symbol:WDR26 "Uncharacterized protein"... 739 2.5e-79 2
UNIPROTKB|Q9H7D7 - symbol:WDR26 "WD repeat-containing pro... 735 2.2e-78 2
UNIPROTKB|F1S8S6 - symbol:WDR26 "Uncharacterized protein"... 735 2.2e-78 2
MGI|MGI:1923825 - symbol:Wdr26 "WD repeat domain 26" spec... 734 2.8e-78 2
ZFIN|ZDB-GENE-041014-277 - symbol:wdr26b "WD repeat domai... 787 3.0e-78 1
RGD|1565589 - symbol:Wdr26 "WD repeat domain 26" species:... 740 1.5e-77 2
UNIPROTKB|Q2TBM8 - symbol:WDR26 "WD repeat domain 26" spe... 736 2.9e-76 2
UNIPROTKB|F1PIR1 - symbol:WDR26 "Uncharacterized protein"... 735 3.6e-76 2
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 641 2.0e-73 2
FB|FBgn0037094 - symbol:CG7611 species:7227 "Drosophila m... 722 2.3e-71 1
ASPGD|ASPL0000009959 - symbol:AN8017 species:162425 "Emer... 500 3.1e-62 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 370 4.6e-34 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 370 4.6e-34 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 370 4.6e-34 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 370 4.6e-34 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 370 4.6e-34 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 370 4.6e-34 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 367 9.5e-34 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 365 1.5e-33 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 362 3.2e-33 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 353 2.9e-32 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 323 9.4e-29 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 316 5.9e-28 1
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 309 3.6e-27 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 303 1.7e-26 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 299 4.8e-26 1
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 294 1.7e-25 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 290 4.8e-25 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 290 4.8e-25 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 288 8.0e-25 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 288 8.0e-25 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 288 8.0e-25 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 287 1.0e-24 1
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 286 1.3e-24 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 286 1.3e-24 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 284 2.2e-24 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 310 2.6e-24 1
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 186 5.2e-23 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 277 1.1e-22 1
SGD|S000000544 - symbol:GID7 "Subunit of GID Complex that... 203 2.4e-22 3
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 262 5.9e-22 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 256 2.7e-21 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 270 3.8e-21 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 269 4.4e-21 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 258 1.5e-20 1
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 242 9.1e-20 1
GENEDB_PFALCIPARUM|PFL0970w - symbol:PFL0970w "pre-mRNA s... 263 1.2e-19 1
UNIPROTKB|Q8I5L1 - symbol:PFL0970w "Pre-mRNA splicing fac... 263 1.2e-19 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 256 1.8e-19 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 239 1.9e-19 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 236 4.1e-19 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 247 6.2e-19 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 263 7.0e-19 1
POMBASE|SPBC1289.11 - symbol:spf38 "splicing factor Spf38... 243 7.1e-19 1
FB|FBgn0038666 - symbol:Smu1 "SMU1 ortholog" species:7227... 253 9.5e-19 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 249 1.2e-18 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 252 1.9e-18 1
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 250 2.9e-18 1
WB|WBGene00021482 - symbol:Y39H10A.6 species:6239 "Caenor... 182 3.0e-18 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 248 4.9e-18 1
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 234 8.8e-18 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 239 1.0e-17 2
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 227 2.8e-17 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 227 2.8e-17 1
UNIPROTKB|Q2TBS9 - symbol:SMU1 "WD40 repeat-containing pr... 236 8.0e-17 1
UNIPROTKB|Q2TAY7 - symbol:SMU1 "WD40 repeat-containing pr... 236 8.0e-17 1
MGI|MGI:1915546 - symbol:Smu1 "smu-1 suppressor of mec-8 ... 236 8.0e-17 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 236 8.3e-17 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 235 9.7e-17 1
UNIPROTKB|Q5ZME8 - symbol:SMU1 "WD40 repeat-containing pr... 235 1.0e-16 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 223 1.3e-16 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 234 1.6e-16 1
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 221 1.9e-16 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 220 3.6e-16 1
RGD|620694 - symbol:Smu1 "smu-1 suppressor of mec-8 and u... 229 4.8e-16 1
ZFIN|ZDB-GENE-040426-916 - symbol:smu1 "smu-1 suppressor ... 229 4.8e-16 1
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 230 5.3e-16 1
UNIPROTKB|J9NS21 - symbol:APAF1 "Apoptotic protease-activ... 233 8.2e-16 1
UNIPROTKB|F1Q410 - symbol:APAF1 "Apoptotic protease-activ... 233 8.2e-16 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 225 1.4e-15 1
GENEDB_PFALCIPARUM|MAL8P1.43 - symbol:MAL8P1.43 "u5 snrnp... 217 1.4e-15 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 212 2.5e-15 1
TAIR|locus:2012971 - symbol:AT1G71840 "AT1G71840" species... 219 3.2e-15 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 217 5.8e-15 1
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 225 6.1e-15 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 206 7.0e-15 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 218 7.9e-15 1
TAIR|locus:2027749 - symbol:SMU1 "AT1G73720" species:3702... 217 1.0e-14 1
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 218 1.1e-14 1
CGD|CAL0002548 - symbol:orf19.5131 species:5476 "Candida ... 168 1.1e-14 3
UNIPROTKB|Q5A5F1 - symbol:CaO19.12596 "Putative uncharact... 168 1.1e-14 3
FB|FBgn0039705 - symbol:Atg16 species:7227 "Drosophila me... 217 1.5e-14 1
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 216 1.8e-14 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 216 1.8e-14 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 215 1.9e-14 1
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 220 2.2e-14 1
WB|WBGene00012479 - symbol:Y18D10A.9 species:6239 "Caenor... 153 2.3e-14 2
UNIPROTKB|Q9XW12 - symbol:Y18D10A.9 "Probable cytosolic i... 153 2.3e-14 2
WARNING: Descriptions of 1174 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 1782 (632.4 bits), Expect = 1.1e-183, P = 1.1e-183
Identities = 332/545 (60%), Positives = 409/545 (75%)
Query: 1 MARPLPSEGDEDVIGPAGVIKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNL 60
MARPLPS+GD++ IG GVI++ EFVRII +ALYSLGY K+GA LEEESGI LH+S + L
Sbjct: 44 MARPLPSQGDDETIGSKGVIRKSEFVRIITRALYSLGYDKTGAMLEEESGISLHNSTIKL 103
Query: 61 FTQQILDGHWDESLATLSKIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEI 120
F QQ+ DG WD+S+ TL +IG DE VK+ASFL+LEQKF E L EK+ DAL+TLR E+
Sbjct: 104 FLQQVKDGKWDQSVKTLHRIGFPDEKAVKAASFLLLEQKFLEFLKVEKIADALRTLRNEM 163
Query: 121 APLCIKNSRVRELXXXXXXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERR 180
APL I RV EL SR ++IPE+R
Sbjct: 164 APLRINTKRVHELASSLISPSSFISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEKR 223
Query: 181 LEHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFS 240
LE LVE +L +QR++C+FHN+ D D+SLY+DHQCG+ QIPS+T QIL+ HTDEVWFLQFS
Sbjct: 224 LECLVENSLHIQRDSCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFS 283
Query: 241 HNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAV 300
HNGKYLASSS D++AIIWE+ +G ++LKH L GH KPV + WS DD+Q+LTCG EE +
Sbjct: 284 HNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVI 343
Query: 301 RRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRT 360
RRWDV SG+C+H+YEK G+ +SCGW+PD + I +G D+SICMW+L G+E ECWKGQRT
Sbjct: 344 RRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLDGREKECWKGQRT 403
Query: 361 LKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLL 420
K+SD+ +T DGK ++++CK+S + L DREA VER IEE+ ITSFSLS DNK++LVNLL
Sbjct: 404 QKVSDIAMTDDGKWLVSVCKDSVISLFDREATVERLIEEEDMITSFSLSNDNKYILVNLL 463
Query: 421 NQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL 480
NQEI LWNIEG+ K+V++YKGHKRSRF+IRSCFGG +QAFIASGSEDSQVYIWHR++ L
Sbjct: 464 NQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKL 523
Query: 481 IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNV---KRK---DCHSNGV- 533
I LPGH+GAVNCVSW+P N HMLASASDD TIRIWGL +N K+K SNGV
Sbjct: 524 IVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQQNQKKKLVQGSSSNGVI 583
Query: 534 HYCNG 538
H CNG
Sbjct: 584 HRCNG 588
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 1011 (360.9 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 193/348 (55%), Positives = 248/348 (71%)
Query: 174 IMIPERRLEHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDE 233
I+IPERRLEHLVE A++ Q + CM+HNS D +SLY DH CGRDQIPS T+QIL H +E
Sbjct: 168 IVIPERRLEHLVETAVMDQIDTCMYHNSCDA-VSLYKDHCCGRDQIPSETVQILVAHKNE 226
Query: 234 VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLT 293
VWF+QFS++GKYLA++S+D +AIIW+V + V LKH L HQ PVS VSWS DD +LLT
Sbjct: 227 VWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLT 286
Query: 294 CGVEEAVRRWDVSSGNCLHVY--EKAGLGLVSCGWHPDRKWIFSGAND--KSICMWELGG 349
CG E ++ WDV +G H + G + SC W PD + G++D + I MW+ G
Sbjct: 287 CGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDG 346
Query: 350 KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLS 409
E++ W+G R K+ DL VT DG+ +IT+ + + +L+ E KVER I E+Q ITS S+S
Sbjct: 347 NEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETKVERVISEEQPITSLSIS 406
Query: 410 RDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQ 469
D KF +VNL QEIHLW++ GE K K+ GH++S++VIRSCFGGL+ +FIASGSEDSQ
Sbjct: 407 GDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQ 466
Query: 470 VYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWG 517
VYIW+ + + L GHS VNCVSWNP NP MLASASDD+TIRIWG
Sbjct: 467 VYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWG 514
Score = 161 (61.7 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 40/114 (35%), Positives = 65/114 (57%)
Query: 12 DVIGPAGVIKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWD 71
+V+G G++K+ EF+RI+ + LYSLG+ S + LE ES I ++ +Q+L G+WD
Sbjct: 7 EVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVLSGNWD 66
Query: 72 ESLATLSKI--GLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPL 123
+ L +I +D++ +A +L+ +Q E L V AL LR + APL
Sbjct: 67 SCVQVLDRIFDNSMDDTR-NTALYLVFKQCLLEYLKRGDVSLALNVLRKQ-APL 118
Score = 77 (32.2 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 50/263 (19%), Positives = 103/263 (39%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL---HVYEKAGLGLVSCGWHP 328
L H+ V V +S+ + L T + W V N + H E + W P
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 329 DRKWIFSGANDKSICMWELGGKELECWKGQRT--LKISDLEVTSDGKQII--TMCKESAL 384
D + + N + + +W++ L G +S D +++ + E +
Sbjct: 280 DDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 385 LLLD---REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG 441
++ D E K R + + +++ D + ++ ++EI + N+E +V+ V
Sbjct: 340 VMWDTDGNEIKAWRGTRIPKVV-DLAVTPDGESMITVFSDKEIRILNLETKVERVIS--- 395
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALP--GHSGAVNCVS--WN 497
+ + G + FI + S ++++W A + L GH + + +
Sbjct: 396 --EEQPITSLSISGDGKFFIVNLS-CQEIHLWDLAG-EWKQPLKFSGHRQSKYVIRSCFG 451
Query: 498 PANPHMLASASDDRTIRIWGLKD 520
+ +AS S+D + IW LK+
Sbjct: 452 GLDSSFIASGSEDSQVYIWNLKN 474
Score = 51 (23.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 479 DLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRK---DCHSNGVH 534
+ + L H V V ++ + + LA+AS D T IW + D N V+ K + H N V
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKY-LATASSDCTAIIWKVLDDNKVELKHTLESHQNPVS 273
Query: 535 Y 535
+
Sbjct: 274 F 274
Score = 45 (20.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 474 HRASCDLIGALPGHSGAV-NCV 494
HR +CD++ + SG V NC+
Sbjct: 127 HRLACDIVYSKEMESGEVDNCL 148
>UNIPROTKB|F1P3E7 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ EMBL:AADN02012163 EMBL:AADN02012164
EMBL:AADN02012165 IPI:IPI00585040 Ensembl:ENSGALT00000015154
Uniprot:F1P3E7
Length = 684
Score = 739 (265.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 165/434 (38%), Positives = 237/434 (54%)
Query: 93 FLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXXXXXXQD 152
FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L +
Sbjct: 236 FLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLRAKAEWE 295
Query: 153 IVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNS---SDRD-MSL 208
SR +M+P RRL++L+ QA+ LQR+ C++HN+ S+ D +SL
Sbjct: 296 GKGTASRSKLLDKLQTYLPPSVMLPPRRLQNLLRQAVELQRDRCLYHNTKLDSNLDSVSL 355
Query: 209 YTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGG-VT 267
DH C R Q P T QIL H +EVWF +FS++G LA+ S D + IIW+VD + +
Sbjct: 356 LIDHVCSRKQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLK 415
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAGLGLVSC 324
L L GH VS ++WS DD L+ CG ++ W +V +G + + L S
Sbjct: 416 LLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSV 475
Query: 325 GWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
W+PD K +G +L G L+ W+G R + L SDGK ++ +
Sbjct: 476 AWNPDGKRFVTGGQRGQFYQCDLNGNLLDSWEGVR---VQCLWCLSDGKTVLASDTHQRI 532
Query: 385 LLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
+ E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV KY+G
Sbjct: 533 RGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVRKYQGVT 591
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
+ + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWNP P M
Sbjct: 592 QGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWNPQIPSM 651
Query: 504 LASASDDRTIRIWG 517
+ASASDD T+RIWG
Sbjct: 652 MASASDDGTVRIWG 665
Score = 77 (32.2 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ +R+I + L+ LG ++ L +ESG L F +++G WD++ L+++
Sbjct: 148 DVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGEWDKAENDLNEL 204
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 735 (263.8 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 164/440 (37%), Positives = 237/440 (53%)
Query: 87 VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXX 146
++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 207 IIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLR 266
Query: 147 XXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSS-DRD 205
+ SR +M+P RRL+ L+ QA+ LQR+ C++HN+ D +
Sbjct: 267 AKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNN 326
Query: 206 M---SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
+ SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + IIW+VD
Sbjct: 327 LDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDP 386
Query: 263 NGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAG 318
+ + L L GH VS ++WS DD L+ CG ++ W +V +G + +
Sbjct: 387 DTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHE 446
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L S W+PD K +G +L G L+ W+G R + L SDGK ++
Sbjct: 447 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVR---VQCLWCLSDGKTVLAS 503
Query: 379 CKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV
Sbjct: 504 DTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVR 562
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWN
Sbjct: 563 KYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWN 622
Query: 498 PANPHMLASASDDRTIRIWG 517
P P M+ASASDD T+RIWG
Sbjct: 623 PQIPSMMASASDDGTVRIWG 642
Score = 72 (30.4 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ +R+I + L LG ++ L +ESG L F +++G WD++ L+++
Sbjct: 126 DVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNEL 182
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 735 (263.8 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 164/440 (37%), Positives = 237/440 (53%)
Query: 87 VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXX 146
++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 206 IIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLR 265
Query: 147 XXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSS-DRD 205
+ SR +M+P RRL+ L+ QA+ LQR+ C++HN+ D +
Sbjct: 266 AKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNN 325
Query: 206 M---SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
+ SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + IIW+VD
Sbjct: 326 LDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDP 385
Query: 263 NGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAG 318
+ + L L GH VS ++WS DD L+ CG ++ W +V +G + +
Sbjct: 386 DTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHE 445
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L S W+PD K +G +L G L+ W+G R + L SDGK ++
Sbjct: 446 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVR---VQCLWCLSDGKTVLAS 502
Query: 379 CKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV
Sbjct: 503 DTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVR 561
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWN
Sbjct: 562 KYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWN 621
Query: 498 PANPHMLASASDDRTIRIWG 517
P P M+ASASDD T+RIWG
Sbjct: 622 PQIPSMMASASDDGTVRIWG 641
Score = 72 (30.4 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ +R+I + L LG ++ L +ESG L F +++G WD++ L+++
Sbjct: 125 DVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNEL 181
>MGI|MGI:1923825 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1923825 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV
CTD:80232 ChiTaRS:WDR26 EMBL:AC113084 EMBL:AK075743 EMBL:AK167116
EMBL:AK167017 EMBL:BC020044 EMBL:BC058601 IPI:IPI00226275
RefSeq:NP_663489.4 UniGene:Mm.289082 ProteinModelPortal:Q8C6G8
SMR:Q8C6G8 IntAct:Q8C6G8 STRING:Q8C6G8 PhosphoSite:Q8C6G8
PaxDb:Q8C6G8 PRIDE:Q8C6G8 Ensembl:ENSMUST00000162819 GeneID:226757
KEGG:mmu:226757 InParanoid:Q8C6G8 NextBio:378339 Bgee:Q8C6G8
CleanEx:MM_WDR26 Genevestigator:Q8C6G8
GermOnline:ENSMUSG00000038733 Uniprot:Q8C6G8
Length = 641
Score = 734 (263.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 164/440 (37%), Positives = 237/440 (53%)
Query: 87 VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXX 146
++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 187 IIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLR 246
Query: 147 XXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSS-DRD 205
+ SR +M+P RRL+ L+ QA+ LQR+ C++HN+ D +
Sbjct: 247 AKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNN 306
Query: 206 M---SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
+ SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + IIW+VD
Sbjct: 307 LDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDP 366
Query: 263 NGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAG 318
+ + L L GH VS ++WS DD L+ CG ++ W +V +G + +
Sbjct: 367 DTHLLKLLKTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHE 426
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L S W+PD K +G +L G L+ W+G R + L SDGK ++
Sbjct: 427 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVR---VQCLWCLSDGKTVLAS 483
Query: 379 CKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV
Sbjct: 484 DTHQRVRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVR 542
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWN
Sbjct: 543 KYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWN 602
Query: 498 PANPHMLASASDDRTIRIWG 517
P P M+ASASDD T+RIWG
Sbjct: 603 PQIPSMMASASDDGTVRIWG 622
Score = 72 (30.4 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ +R+I + L LG ++ L +ESG L F +++G WD++ L+++
Sbjct: 106 DVIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNEL 162
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 180/505 (35%), Positives = 269/505 (53%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIGLV 83
+ +R+I + L+ LG ++ L +ESG L S F +++G WD++ L+++ +
Sbjct: 54 DVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKAL 113
Query: 84 DES--VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXX 141
S + FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 114 MHSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLKYNTDRIHVLSGYLMCSH 173
Query: 142 XXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNS 201
+ A SR +M+P RRL+ L+ QA+ LQR+ C++HN+
Sbjct: 174 AEDLKAKAEWEGKGAGSRCRLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNT 233
Query: 202 ---SDRD-MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAII 257
S D +SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + II
Sbjct: 234 KLDSSLDSVSLLLDHVCSRKQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVII 293
Query: 258 WEVDLNGG-VTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHV 313
W+V+ + + L L GH VS ++WS DD L+ CG ++ W +V +G +
Sbjct: 294 WQVEPDTHQLKLLRTLEGHAYGVSYLAWSPDDVYLIACGPDDCSELWLWNVQTGELRTKM 353
Query: 314 YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGK 373
+ L S W+PD K +G +L G LE W+G R + L DG+
Sbjct: 354 SQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLESWEGVR---VQCLWCMGDGR 410
Query: 374 QIITMCKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE 432
++ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++
Sbjct: 411 TVLASDTHQRIRGYSFEDLTDRNIVQEDHPIMSFTVSKNGRLALLNVATQGVHLWDLQDR 470
Query: 433 VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN 492
V LV KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VN
Sbjct: 471 V-LVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIVELTGHTRTVN 529
Query: 493 CVSWNPANPHMLASASDDRTIRIWG 517
CVSWNP P ++ASASDD T+RIWG
Sbjct: 530 CVSWNPCIPSLMASASDDGTVRIWG 554
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 740 (265.6 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 164/440 (37%), Positives = 238/440 (54%)
Query: 87 VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXX 146
++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 168 IIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLR 227
Query: 147 XXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSS-DRD 205
+ A SR +M+P RRL+ L+ QA+ LQR+ C++HN+ D +
Sbjct: 228 AKAEWEGKGAASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNN 287
Query: 206 M---SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
+ SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + I+W+VD
Sbjct: 288 LDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIVWQVDA 347
Query: 263 NGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAG 318
+ + L L GH VS ++WS DD L+ CG ++ W +V +G + +
Sbjct: 348 DTHLLKLLKTLEGHAYGVSYIAWSPDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHE 407
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L S W+PD K +G +L G L+ W+G R + L SDGK ++
Sbjct: 408 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVR---VQCLWCLSDGKTVLAS 464
Query: 379 CKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV
Sbjct: 465 DTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVR 523
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWN
Sbjct: 524 KYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWN 583
Query: 498 PANPHMLASASDDRTIRIWG 517
P P M+ASASDD T+RIWG
Sbjct: 584 PQIPSMMASASDDGTVRIWG 603
Score = 59 (25.8 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ +R+I + L LG ++ L ++G L F +++G WD++ L+++
Sbjct: 88 DVIRLIGQHLNGLGLXQT-VDLLMQAGCRLEHPSATKFRNHVMEGDWDKAENDLNEL 143
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 736 (264.1 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 165/440 (37%), Positives = 238/440 (54%)
Query: 87 VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXX 146
++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 60 IIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLR 119
Query: 147 XXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNS---SD 203
+ SR +M+P RRL+ L+ QA+ LQR+ C++HN+ S+
Sbjct: 120 AKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDSN 179
Query: 204 RD-MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
D +SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + IIW+VD
Sbjct: 180 LDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDP 239
Query: 263 NGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAG 318
+ + L L GH VS ++WS DD L+ CG ++ W +V +G + +
Sbjct: 240 DTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHE 299
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L S W+PD K +G +L G L+ W+G R + L SDGK ++
Sbjct: 300 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVR---VQCLWCLSDGKTVLAS 356
Query: 379 CKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV
Sbjct: 357 DTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVR 415
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWN
Sbjct: 416 KYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWN 475
Query: 498 PANPHMLASASDDRTIRIWG 517
P P M+ASASDD T+RIWG
Sbjct: 476 PQIPSMMASASDDGTVRIWG 495
Score = 51 (23.0 bits), Expect = 2.9e-76, Sum P(2) = 2.9e-76
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 47 EESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ESG L F +++G WD++ L+++
Sbjct: 2 QESGCRLEHPSATKFRNHVMEGDWDKAENDLNEL 35
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 735 (263.8 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 164/440 (37%), Positives = 237/440 (53%)
Query: 87 VVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXXXX 146
++ FL+L+QK+ E L+ KV++AL+ LR E+ PL R+ L
Sbjct: 60 IIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYNTERIHVLSGYLMCSHAEDLR 119
Query: 147 XXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSS-DRD 205
+ SR +M+P RRL+ L+ QA+ LQR+ C++HN+ D +
Sbjct: 120 AKAEWEGKGTASRSKLLDKLQTYLPPSVMLPPRRLQTLLRQAVELQRDRCLYHNTKLDNN 179
Query: 206 M---SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
+ SL DH C R Q P T QIL H +EVWF +FS++G LA+ S D + IIW+VD
Sbjct: 180 LDSVSLLIDHVCSRRQFPCYTQQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDP 239
Query: 263 NGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW--DVSSGNC-LHVYEKAG 318
+ + L L GH VS ++WS DD L+ CG ++ W +V +G + +
Sbjct: 240 DTHLLKLLKTLEGHAYGVSYIAWSPDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHE 299
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L S W+PD K +G +L G L+ W+G R + L SDGK ++
Sbjct: 300 DSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVR---VQCLWCLSDGKTVLAS 356
Query: 379 CKESALLLLDREAKVERYI-EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ + E +R I +ED I SF++S++ + L+N+ Q +HLW+++ V LV
Sbjct: 357 DTHQRIRGYNFEDLTDRNIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRV-LVR 415
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
KY+G + + I SCFGG + FIASGSED +VYIWH+ S I L GH+ VNCVSWN
Sbjct: 416 KYQGVTQGFYTIHSCFGGHNEDFIASGSEDHKVYIWHKRSELPIAELTGHTRTVNCVSWN 475
Query: 498 PANPHMLASASDDRTIRIWG 517
P P M+ASASDD T+RIWG
Sbjct: 476 PQIPSMMASASDDGTVRIWG 495
Score = 51 (23.0 bits), Expect = 3.6e-76, Sum P(2) = 3.6e-76
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 47 EESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+ESG L F +++G WD++ L+++
Sbjct: 2 QESGCRLEHPSATKFRNHVMEGDWDKAENDLNEL 35
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 641 (230.7 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 139/363 (38%), Positives = 211/363 (58%)
Query: 174 IMIPERRLEHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDE 233
I++P+RRLEHL++QA Q + ++HN ++ S +D++ ++P++ + H+DE
Sbjct: 157 ILLPKRRLEHLLQQAKDYQVSSQVYHNVL-KNFSFLSDYKADPSELPTKEYHVFHDHSDE 215
Query: 234 VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKH--KLSGHQKPVSCVSWSSDDQQL 291
VW + +SHNG+YLAS+S D++AII++V V LK +L GH V+ + WS DD+ L
Sbjct: 216 VWQISYSHNGRYLASASKDKTAIIFDV-----VNLKRVFRLIGHIDTVAYIRWSPDDRYL 270
Query: 292 LTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKE 351
L+C +++V WD +G L Y K G + C W PD +G+ D I W L G+
Sbjct: 271 LSCSCDKSVILWDAFTGEKLRDY-KHGFSVSCCCWLPDGLSFITGSPDCHITHWSLNGEI 329
Query: 352 LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA---KVE-----RYIEEDQTI 403
L W+ + I D+ +TSDG ++ + E + D+ VE + I +
Sbjct: 330 LYKWED---VNIYDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETRECIKKISLQSKV 386
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIAS 463
TS LS+D+K+ L NL LW++E E ++V +Y GHK F+I SCFGG + F+ S
Sbjct: 387 TSICLSKDSKYALTNLEPHTTFLWDLE-ENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLS 445
Query: 464 GSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNV 523
GSED ++ IWHR S L+ L GH VN V++NP +P+ ASA DD T+RIW KD N
Sbjct: 446 GSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIWSNKD-NP 504
Query: 524 KRK 526
+R+
Sbjct: 505 RRQ 507
Score = 119 (46.9 bits), Expect = 2.0e-73, Sum P(2) = 2.0e-73
Identities = 29/96 (30%), Positives = 51/96 (53%)
Query: 22 RVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIG 81
++E + ++ + L GY +S LE+E+G+ + V Q +L G W + A S +
Sbjct: 8 QLEVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAEAAFSIMQ 67
Query: 82 LVDESVVKSASFLILEQKFFELLDAEKVMDALKTLR 117
L DES K A FL+ +Q+ EL + + +A+ L+
Sbjct: 68 LRDESKRKEAQFLLQKQRCLELARSGAICEAIYVLQ 103
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 177/528 (33%), Positives = 275/528 (52%)
Query: 24 EFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIG-L 82
E +R+I + L+ +G KS L ESG L F + +L G W ++ + L + L
Sbjct: 99 EIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDLKDLEPL 158
Query: 83 VDE---SVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXX 139
+D + + F++LEQK+ E LD +DAL LR+E+ PL +RV +L
Sbjct: 159 IDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSELTPLQHNITRVHQLSSYMMC 218
Query: 140 XXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFH 199
+ SR +M+ RRL L++QA+ LQ + C H
Sbjct: 219 STNQDLYQRAKWEGKGILSRALVMERLQTFMPPSVMMSPRRLRTLLQQAVELQSQHCPCH 278
Query: 200 N----SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSA 255
+ ++ +SL TDH C D P +T+QIL H DEVWF +FS +G LA+ S D +
Sbjct: 279 DMAWETNLETVSLLTDHCCTTDGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTV 338
Query: 256 IIWEVDLNGGVTLKHK--LSGH-QKPVSCVSWSSDDQQLLTCGVEEA--VRRWDVSSGNC 310
IIW+VD +TLKH+ L G Q VS VSWS D + +L G E++ + W+V G
Sbjct: 339 IIWDVDPYK-LTLKHRRVLDGQAQLSVSFVSWSPDSKLILVGGTEDSHELYIWNVDDGKL 397
Query: 311 LHVYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
+ + ++ ++CG + D G + + +L G ++ W+G R ++ +
Sbjct: 398 VVKFSQSLEDSLACGAFSRDGARFVCGGQKGQLYLCDLNGTIVDSWEGVR---VNSIAFR 454
Query: 370 SDGKQIITMCKESALLLLDREAKVERY--IEEDQTITSFSLSRDNKFLLVNLLNQEIHLW 427
+D K I+ + + ++ + + E I +FS++ ++ L+N+ NQ +HLW
Sbjct: 455 ADNKTILAADNHYRIRGYNFDSPRSDFDILREPHPIMTFSINSADRLALLNVSNQGLHLW 514
Query: 428 NIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH 487
+IE + LV +++G ++S F I SCFGG+ ++F+ASGSED VYIWH + + L GH
Sbjct: 515 DIEDKC-LVRRFQGIRQSNFAIHSCFGGVNESFVASGSEDKVVYIWHIKREEPLAKLAGH 573
Query: 488 SGAVNCVSWNPANPHMLASASDDRTIRIWGLK----DLNVKRKDCHSN 531
+ VNCVSWNP P +LASASDD T+RIWG K + DC S+
Sbjct: 574 TKTVNCVSWNPVYPSLLASASDDATVRIWGPKPNGSSATTESDDCSSS 621
>ASPGD|ASPL0000009959 [details] [associations]
symbol:AN8017 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:BN001302 EMBL:AACD01000139 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 OrthoDB:EOG43R6WJ
HOGENOM:HOG000160946 RefSeq:XP_681286.1 ProteinModelPortal:Q5AUL3
EnsemblFungi:CADANIAT00004037 GeneID:2869142 KEGG:ani:AN8017.2
Uniprot:Q5AUL3
Length = 827
Score = 500 (181.1 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 110/314 (35%), Positives = 169/314 (53%)
Query: 207 SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGV 266
SLY+DH C RD P T L HTDEVW QFSH+G L ++ D + II++
Sbjct: 494 SLYSDHMCDRDDFPLGTKLELNKHTDEVWHCQFSHDGTKLVTAGRDSNVIIYDTST---F 550
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW 326
++ + L H+ V+ WS DD +L+TC + R W +G CL K + + W
Sbjct: 551 SVLYILGEHKNGVAHAVWSPDDTKLITCSRDSTARVWSTETGRCLLTINKHQEPVTAAVW 610
Query: 327 HPDRKWIFSGAND--KSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
PD + + + D +C W + G+ L W G ++ D +T DG+++I + E +
Sbjct: 611 APDGESFVTASLDVNSQLCHWNMRGESLYMWHGG--FRVYDCAITPDGRRLIAVDVERKI 668
Query: 385 LLLDREAKVERYIEEDQT-ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
+ + E YI ++ TS +SRD++ +LVNL +I L +IE +++ +++G K
Sbjct: 669 RVYNFHTHEEEYILPLKSKATSVVVSRDSRHMLVNLTECQIQLIDIETS-EVIRRFQGQK 727
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH-SGAVNCVSWNPANPH 502
+S F+IRS FGG + F+ SGSE++ L+ L GH G VN +SWNPA+P
Sbjct: 728 QSTFIIRSTFGGAAENFVVSGSEENGT---------LVETLEGHLEGCVNAISWNPADPG 778
Query: 503 MLASASDDRTIRIW 516
M ASA DD ++IW
Sbjct: 779 MFASAGDDCLVKIW 792
Score = 166 (63.5 bits), Expect = 3.1e-62, Sum P(2) = 3.1e-62
Identities = 45/127 (35%), Positives = 62/127 (48%)
Query: 22 RVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHW----------- 70
R E RI+ ++LY LGY+ S A L +ESG L S V +F +L+G W
Sbjct: 329 REEVTRILIQSLYELGYSNSAALLSKESGYQLESPAVAIFRNAVLEGRWAEAERILVQSF 388
Query: 71 ----DESLATLSKIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIK 126
E A+ K+ LV+ + F + +QKF ELLDA + AL LR E+ PL
Sbjct: 389 QEQGQEETASKEKLALVENAEKSEMLFYLRQQKFLELLDARDLGAALMVLRHELTPLNYD 448
Query: 127 NSRVREL 133
R+ L
Sbjct: 449 VGRLHAL 455
Score = 137 (53.3 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 59/274 (21%), Positives = 113/274 (41%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L IL H + V +S + L + S D +A +W + G L ++ HQ+PV+
Sbjct: 553 LYILGEHKNGVAHAVWSPDDTKLITCSRDSTARVWSTE-TGRCLLT--INKHQEPVTAAV 609
Query: 284 WSSDDQQLLTCG--VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
W+ D + +T V + W++ G L+++ G + C PD + + + ++
Sbjct: 610 WAPDGESFVTASLDVNSQLCHWNMR-GESLYMWH-GGFRVYDCAITPDGRRLIAVDVERK 667
Query: 342 ICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ 401
I ++ E E ++ K + + V+ D + ++ E + L+D IE +
Sbjct: 668 IRVYNFHTHEEEYILPLKS-KATSVVVSRDSRHMLVNLTECQIQLID--------IETSE 718
Query: 402 TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVK---LVAKYKGHKRSRFVIRSCFGGLEQ 458
I F + + F++ + + + G + LV +GH V + +
Sbjct: 719 VIRRFQGQKQSTFIIRSTFGGAAENFVVSGSEENGTLVETLEGHLEG-CVNAISWNPADP 777
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN 492
AS +D V IW R ++PG AV+
Sbjct: 778 GMFASAGDDCLVKIWTRERDAHPNSVPGKRRAVS 811
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ L+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 7 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 63
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 123
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 124 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 182
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 183 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 241
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 242 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 300
Query: 513 IRIW 516
I++W
Sbjct: 301 IKLW 304
Score = 171 (65.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 89 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 145
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 146 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 205
Query: 336 GANDKSICMWELG-GKELECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ + G + K ++ VT GK I++ +++ + + + +
Sbjct: 206 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 264
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K + + ++ D I++ +N L N + I LW
Sbjct: 265 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 149 (57.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 50/265 (18%), Positives = 109/265 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
LK L+GH K VS V +S + + L + ++ ++ W G LG+ W
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 70
Query: 328 PDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + I++ + ++ +
Sbjct: 71 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRI 129
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
D + K + + +++ +RD ++ + + +W+ G+ +
Sbjct: 130 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 189
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ +++
Sbjct: 190 PVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 245
Query: 502 HMLASASDDRTIRIWGLKDLNVKRK 526
+ S S+D + IW L+ + +K
Sbjct: 246 KWIVSGSEDNLVYIWNLQTKEIVQK 270
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 20 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 75
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 134
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 135 GKCLKTLPAHSDPVSAVHFNRDGS 158
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ L+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 89
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 267
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 326
Query: 513 IRIW 516
I++W
Sbjct: 327 IKLW 330
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 171
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 336 GANDKSICMWELG-GKELECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ + G + K ++ VT GK I++ +++ + + + +
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 290
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K + + ++ D I++ +N L N + I LW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/265 (18%), Positives = 109/265 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
LK L+GH K VS V +S + + L + ++ ++ W G LG+ W
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 328 PDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + I++ + ++ +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRI 155
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
D + K + + +++ +RD ++ + + +W+ G+ +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ +++
Sbjct: 216 PVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 502 HMLASASDDRTIRIWGLKDLNVKRK 526
+ S S+D + IW L+ + +K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQK 296
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 101
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 160
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS 184
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ L+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 89
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 267
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 326
Query: 513 IRIW 516
I++W
Sbjct: 327 IKLW 330
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 171
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 336 GANDKSICMWELG-GKELECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ + G + K ++ VT GK I++ +++ + + + +
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 290
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K + + ++ D I++ +N L N + I LW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/265 (18%), Positives = 109/265 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
LK L+GH K VS V +S + + L + ++ ++ W G LG+ W
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 328 PDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + I++ + ++ +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRI 155
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
D + K + + +++ +RD ++ + + +W+ G+ +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ +++
Sbjct: 216 PVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 502 HMLASASDDRTIRIWGLKDLNVKRK 526
+ S S+D + IW L+ + +K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQK 296
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 101
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 160
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS 184
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ L+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 89
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 267
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 326
Query: 513 IRIW 516
I++W
Sbjct: 327 IKLW 330
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 171
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 336 GANDKSICMWELG-GKELECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ + G + K ++ VT GK I++ +++ + + + +
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 290
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K + + ++ D I++ +N L N + I LW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/265 (18%), Positives = 109/265 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
LK L+GH K VS V +S + + L + ++ ++ W G LG+ W
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 328 PDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + I++ + ++ +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRI 155
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
D + K + + +++ +RD ++ + + +W+ G+ +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ +++
Sbjct: 216 PVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 502 HMLASASDDRTIRIWGLKDLNVKRK 526
+ S S+D + IW L+ + +K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQK 296
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 101
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 160
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS 184
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ L+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 89
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 267
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 326
Query: 513 IRIW 516
I++W
Sbjct: 327 IKLW 330
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 171
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 336 GANDKSICMWELG-GKELECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ + G + K ++ VT GK I++ +++ + + + +
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 290
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K + + ++ D I++ +N L N + I LW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/265 (18%), Positives = 109/265 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
LK L+GH K VS V +S + + L + ++ ++ W G LG+ W
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 328 PDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + I++ + ++ +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRI 155
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
D + K + + +++ +RD ++ + + +W+ G+ +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ +++
Sbjct: 216 PVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 502 HMLASASDDRTIRIWGLKDLNVKRK 526
+ S S+D + IW L+ + +K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQK 296
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 101
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 160
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS 184
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ L+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 33 PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 89
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 267
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 326
Query: 513 IRIW 516
I++W
Sbjct: 327 IKLW 330
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 57/220 (25%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 171
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 336 GANDKSICMWELG-GKELECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ + G + K ++ VT GK I++ +++ + + + +
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 290
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K + + ++ D I++ +N L N + I LW
Sbjct: 291 KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/265 (18%), Positives = 109/265 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
LK L+GH K VS V +S + + L + ++ ++ W G LG+ W
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWS 96
Query: 328 PDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + I++ + ++ +
Sbjct: 97 SDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRI 155
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
D + K + + +++ +RD ++ + + +W+ G+ +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 215
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ +++
Sbjct: 216 PVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 502 HMLASASDDRTIRIWGLKDLNVKRK 526
+ S S+D + IW L+ + +K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQK 296
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 101
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 160
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS 184
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 92/304 (30%), Positives = 165/304 (54%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ TL+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 60 PNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 116
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD + L++ ++ ++ W++S+G L + + C ++P I SG+
Sbjct: 117 ISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSF 176
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 177 DESVRIWDVRTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 235
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y GHK ++ I + F
Sbjct: 236 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTGHKNEKYCIFANFS 294
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ S +++ L GH+ V C + +P +++ASA+ +D+T
Sbjct: 295 VTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTE-NIIASAALENDKT 353
Query: 513 IRIW 516
I++W
Sbjct: 354 IKLW 357
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 59/285 (20%), Positives = 120/285 (42%)
Query: 248 SSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSS 307
+SSN ++ + + TLK L+GH K VS V +S + + L + ++ ++ W
Sbjct: 44 TSSNSSASNKSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYD 103
Query: 308 GNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDL 366
G LG+ W D + + SG++DK++ +WEL GK L+ KG +
Sbjct: 104 GKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNY-VFCC 162
Query: 367 EVTSDGKQIITMCKESALLLLD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEI 424
I++ + ++ + D R K + + +++ +RD ++ + +
Sbjct: 163 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 222
Query: 425 HLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGA 483
+W+ G+ + FV S G +I + + D+ + +W + +
Sbjct: 223 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKT 278
Query: 484 LPGHSGAVNCV--SWNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
GH C+ +++ + S S+D + IW L+ V +K
Sbjct: 279 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQK 323
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 93/304 (30%), Positives = 163/304 (53%)
Query: 220 PSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P+ TL+ L GHT V ++FS NG++LASSS D+ IW +G + +SGH+
Sbjct: 33 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDG--KFEKTISGHKLG 89
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+S V+WSSD L++ ++ ++ WDVSSG CL + + C ++P I SG+
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 339 DKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
D+S+ +W++ GK L+ +S + DG I++ + + D + ++
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSD-PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 208
Query: 396 YIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
I++D SF S + K++L L+ + LW+ + K + Y HK ++ I + F
Sbjct: 209 LIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS-KGKCLKTYTCHKNEKYCIFANFS 267
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRT 512
+I SGSED+ VYIW+ + +++ L GH+ V + +P +++ASA+ +D+T
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTE-NIIASAALENDKT 326
Query: 513 IRIW 516
I++W
Sbjct: 327 IKLW 330
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 58/220 (26%), Positives = 103/220 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+ L+GH++ V+ F+ + S S D S IW D+ G LK L H
Sbjct: 115 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVKTGKCLK-TLPAHS 171
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFS 335
PVS V ++ D +++ + R WD +SG CL VS + P+ K+I +
Sbjct: 172 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA 231
Query: 336 GANDKSICMWELG-GKELE---CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA 391
D ++ +W+ GK L+ C K ++ ++ VT GK I++ +++ + + + +
Sbjct: 232 ATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTG-GKWIVSGSEDNLVYIWNLQT 290
Query: 392 K-VERYIE--EDQTITSFSLSRDNKFLLVNLLNQE-IHLW 427
K V + ++ D I++ +N L N + I LW
Sbjct: 291 KEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 152 (58.6 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 56/285 (19%), Positives = 117/285 (41%)
Query: 248 SSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSS 307
SSSN++S + TLK L+GH K VS V +S + + L + ++ ++ W
Sbjct: 20 SSSNNQSK---PAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 76
Query: 308 GNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDL 366
G LG+ W D + S ++DK++ +W++ GK L+ KG +
Sbjct: 77 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNY-VFCC 135
Query: 367 EVTSDGKQIITMCKESALLLLD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEI 424
I++ + ++ + D + K + + +++ +RD ++ + +
Sbjct: 136 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 195
Query: 425 HLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGA 483
+W+ G+ + FV S G +I + + D+ + +W + +
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKT 251
Query: 484 LPGHSGAVNCV--SWNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
H C+ +++ + S S+D + IW L+ V +K
Sbjct: 252 YTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQK 296
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/219 (21%), Positives = 96/219 (43%)
Query: 323 SCGWHPDRKWIFSGANDKSICMW-ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
S + P+ +W+ S + DK I +W GK + G + L ISD+ +SD +++ +
Sbjct: 50 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSASDD 108
Query: 382 SALLLLD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY 439
L + D K + ++ + + + + ++ ++ + +W+++ K +
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKTL 167
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL-PGHSGAVNCVSWNP 498
H + + + + I S S D IW AS + L + V+ V ++P
Sbjct: 168 PAHSDP---VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 224
Query: 499 ANPHMLASASDDRTIRIWGL-KDLNVKRKDCHSNGVHYC 536
++LA A+ D T+++W K +K CH N YC
Sbjct: 225 NGKYILA-ATLDNTLKLWDYSKGKCLKTYTCHKNE-KYC 261
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 37/144 (25%), Positives = 67/144 (46%)
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ ++S S + ++L + ++ I +W + K GHK I +
Sbjct: 46 KAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKLG---ISDVAWSSDSNL 101
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D + IW +S + L GHS V C ++NP + +++ S S D ++RIW +K
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKT 160
Query: 521 LN-VKRKDCHSN---GVHYCNGGT 540
+K HS+ VH+ G+
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGS 184
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 96/304 (31%), Positives = 156/304 (51%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
P R L+ L+GHT + ++FS++G LAS+S D++ I+W +L H+ GH +
Sbjct: 32 PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSAT---NYSLIHRYEGHSSGI 88
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSG-NCLHVYEKAGLGLVSC-GWHPDRKWIFSGA 337
S ++WSSD + + +R WD S CL V + V C ++P I SG+
Sbjct: 89 SDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL-RGHTNFVFCVNFNPPSNLIVSGS 147
Query: 338 NDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAK-VE 394
D++I +WE+ GK + K ++ IS + DG I++ + + + D +E ++
Sbjct: 148 FDETIRIWEVKTGKCVRMIKAH-SMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLK 206
Query: 395 RYIEEDQTITSFS-LSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
I++ SF+ S + KF+LV L+ + L N K + Y GH F I S F
Sbjct: 207 TLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY-ATGKFLKVYTGHTNKVFCITSAF 265
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD-DRT 512
+I SGSED+ VY+W + +++ L GH+ AV VS +P + +S + D+T
Sbjct: 266 SVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKT 325
Query: 513 IRIW 516
IRIW
Sbjct: 326 IRIW 329
Score = 173 (66.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 61/271 (22%), Positives = 120/271 (44%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH +SCV +S+D L + V++ + W ++ + +H YE G+ W D
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98
Query: 332 WIFSGANDKSICMWELGGKELECWKGQR--TLKISDLEVTSDGKQIITMCKESALLLLD- 388
+ S ++D ++ +W+ EC K R T + + I++ + + + +
Sbjct: 99 YTCSASDDCTLRIWD-ARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEV 157
Query: 389 REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGE-VKLVAKYKGHKRS 445
+ K R I+ I+S +RD ++ + +W+ EG +K + K S
Sbjct: 158 KTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVS 217
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS--WNPANPHM 503
F S G FI + DS + + + A+ + GH+ V C++ ++ N
Sbjct: 218 -FAKFSPNG----KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 272
Query: 504 LASASDDRTIRIWGLKDLNV-KRKDCHSNGV 533
+ S S+D + +W L+ N+ +R + H++ V
Sbjct: 273 IVSGSEDNCVYLWDLQARNILQRLEGHTDAV 303
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
I+ S D L +++ + LW+ L+ +Y+GH I + +
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATN-YSLIHRYEGHSSG---ISDLAWSSDSHYTC 101
Query: 463 SGSEDSQVYIWH-RASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDL 521
S S+D + IW R+ + + L GH+ V CV++NP + +++ S S D TIRIW +K
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPS-NLIVSGSFDETIRIWEVKTG 160
Query: 522 N-VKRKDCHS---NGVHYCNGGT 540
V+ HS + VH+ G+
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGS 183
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 92/326 (28%), Positives = 169/326 (51%)
Query: 199 HNSSDRDMSLYTDHQCGRD-QIPSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
H ++R SL + + + Q P+ L++ L GH+ + ++FS NG++LASS+ D I
Sbjct: 5 HLPAERAQSLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALII 64
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK 316
IW +G K L GH +S V+WSSD +L++ ++ ++ WD+ SG CL +
Sbjct: 65 IWGA-YDGNC--KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKG 121
Query: 317 AGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQI 375
+ C ++P I SG+ D+S+ +WE+ GK L+ IS + +G I
Sbjct: 122 HSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSD-PISAVNFNCNGSLI 180
Query: 376 ITMCKESALLLLDREAK--VERYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGE 432
++ + + D + + +E SF S + K++L L+ + LW+
Sbjct: 181 VSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYS-R 239
Query: 433 VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN 492
+ + Y GHK ++ + + F + ++ SGSED+ VYIW+ + +++ L GH+ V
Sbjct: 240 GRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVI 299
Query: 493 CVSWNPANPHMLASAS--DDRTIRIW 516
+ +P +++ASA+ +D+TI++W
Sbjct: 300 SAACHPTK-NIIASAALENDKTIKVW 324
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 51/273 (18%), Positives = 113/273 (41%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
L+ L+GH +S V +S + + L + + + W GNC L + W
Sbjct: 31 LRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWS 90
Query: 328 PDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + S ++DK++ +W++ GK L+ KG + + I++ + ++ +
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDF-VFCCDFNPPSNLIVSGSFDESVKI 149
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHK 443
+ + K + + I++ + + + ++ + +W+ G+ +G+
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANP 501
FV S G +I + + D+ + +W + + GH C+ S++
Sbjct: 210 PVSFVKFSPNG----KYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGR 265
Query: 502 HMLASASDDRTIRIWGLKDLN-VKRKDCHSNGV 533
+ S S+D + IW L+ V+R H++ V
Sbjct: 266 KWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
I+S S + ++L + + I +W +G K Y GH I + + +
Sbjct: 42 ISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTL-Y-GHSLE---ISDVAWSSDSSRL 96
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDL 521
S S+D + +W S + L GHS V C +NP + +++ S S D +++IW +K
Sbjct: 97 VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPS-NLIVSGSFDESVKIWEVKTG 155
Query: 522 N-VKRKDCHSN---GVHY-CNG 538
+K HS+ V++ CNG
Sbjct: 156 KCLKTLSAHSDPISAVNFNCNG 177
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 323 (118.8 bits), Expect = 9.4e-29, P = 9.4e-29
Identities = 78/305 (25%), Positives = 153/305 (50%)
Query: 218 QIPSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
Q P+ L+ L+GH + ++FS +GK+LAS+S D++ IW +G + L GH+
Sbjct: 32 QTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGA-YDG--KFERTLEGHK 88
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSG 336
+ +S ++WS D + + + ++ ++ WDV SG + + + ++P I SG
Sbjct: 89 EGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSG 148
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VE 394
+ D+++ +W++ E + ++ + DG +++ + + + D +
Sbjct: 149 SFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLN 208
Query: 395 RYIEEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
ED SF S + KF+L L+ + LW+ K + Y GHK ++ I S F
Sbjct: 209 TISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTF 268
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDR 511
+I +GSED+ +YI++ + +++ L GH V V+ +P +++AS + DR
Sbjct: 269 SVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTE-NIIASGALEKDR 327
Query: 512 TIRIW 516
+++IW
Sbjct: 328 SVKIW 332
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 316 (116.3 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 84/302 (27%), Positives = 155/302 (51%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVD-LNGGVTLK-HKLSGHQKPVSCV 282
Q L H V ++FS +G+ LAS+S D++ + ++ +N + + +GH+ +S V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKS 341
++SSD + +++ ++ ++ WDV +G+ + C ++P I SG+ D++
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLI-GHTNYAFCVNFNPQSNMIVSGSFDET 136
Query: 342 ICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIE 398
+ +W++ GK L+ ++ ++ DG I++ + + D V+ I+
Sbjct: 137 VRIWDVTTGKCLKVLPAHSD-PVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID 195
Query: 399 EDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE 457
++ SF S + KF+LV L+ + LWNI K + Y GH +++ I S F
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS-AKFLKTYTGHVNAQYCISSAFSVTN 254
Query: 458 QAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWG 517
I SGSED+ V++W S L+ L GH+ V V+ +P +++AS S D+T+RIW
Sbjct: 255 GKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE-NLIASGSLDKTVRIWT 313
Query: 518 LK 519
K
Sbjct: 314 QK 315
Score = 217 (81.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 72/281 (25%), Positives = 140/281 (49%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S+D+ + YT + D I + +Q GH + + + FS + +++ S+S+D++ +W+V
Sbjct: 43 SADKTIRTYTINTIN-DPI-AEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDV 100
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG 320
+ G +K L GH CV+++ +++ +E VR WDV++G CL V
Sbjct: 101 ET--GSLIK-TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDP 157
Query: 321 LVSCGWHPDRKWIFSGANDKSIC-MWELG-GKELECWKGQRTLKISDLEVTSDGKQIITM 378
+ + ++ D I S + D +C +W+ G G ++ +S + + +GK I+
Sbjct: 158 VTAVDFNRDGSLIVSSSYD-GLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVG 216
Query: 379 CKESALLLLD-REAK-VERY---IEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGE 432
++ L L + AK ++ Y + I+S FS++ + K ++ + +H+W + +
Sbjct: 217 TLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT-NGKRIVSGSEDNCVHMWELNSK 275
Query: 433 VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
KL+ K +GH + + +C + IASGS D V IW
Sbjct: 276 -KLLQKLEGHTETVMNV-ACHP--TENLIASGSLDKTVRIW 312
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 58/275 (21%), Positives = 120/275 (43%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGL--GLVSCGW 326
L+ H + VS V +SSD + L + ++ +R + +++ N V E G G+ +
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 327 HPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALL 385
D ++I S ++DK++ +W++ G ++ G + I++ + +
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC-VNFNPQSNMIVSGSFDETVR 138
Query: 386 LLD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGE-VKLVAKYKG 441
+ D K + + +T+ +RD ++ + + +W+ G VK + +
Sbjct: 139 IWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN 198
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS--WNPA 499
S FV S G FI G+ D+ + +W+ +S + GH A C+S ++
Sbjct: 199 PPVS-FVRFSPNG----KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVT 253
Query: 500 NPHMLASASDDRTIRIWGLKDLNVKRK-DCHSNGV 533
N + S S+D + +W L + +K + H+ V
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETV 288
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 309 (113.8 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 93/321 (28%), Positives = 160/321 (49%)
Query: 218 QIPSRT------LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHK 271
++P RT +LQGH E++ QFS +G +LAS+ D+ +W V G
Sbjct: 17 ELPKRTSSLMAPTMVLQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVF--GECENFAV 74
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR- 330
L GH+ + V +++D L++ G ++ VR WD+ +G+C+ + K+ +V+ R
Sbjct: 75 LKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNF-KSHTDIVNSVDVNRRG 133
Query: 331 -KWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCK--ESALLLL 387
+ I S ++D ++ + ++ KE + K VT + +C ++ + +
Sbjct: 134 PQMICSASDDGTVMVHDMRSKEAA---KKFICKYQQTAVTFNDAADNVICGGIDNQIKVW 190
Query: 388 DREAKVERYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV---KLVAKYKG- 441
D RY+ TITS S+S + FLL N ++ + W+I V +LVA+Y+G
Sbjct: 191 DMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGA 250
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + +++ C +I +GS D VY+W+ S + LPGH G+VNC + +P
Sbjct: 251 SHNFEKNLLK-CGWSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQ 309
Query: 501 PHMLASASDDRTIRIWGLKDL 521
+L SA D+TI + G DL
Sbjct: 310 -QILLSAGSDKTIFL-GELDL 328
Score = 159 (61.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/183 (26%), Positives = 89/183 (48%)
Query: 174 IMIPERRLEHLVEQALV-LQREACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHT 231
+M+ + R + ++ + Q+ A F++++D + D+Q D + + +L GH
Sbjct: 146 VMVHDMRSKEAAKKFICKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHR 205
Query: 232 DEVWFLQFSHNGKYLASSSNDRSAIIWEVDL---NGGVTLKHKLSGH--QKPVSCVSWSS 286
D + L SHNG +L S+S D S + W++ + +++ + H +K + WS
Sbjct: 206 DTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSP 265
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC-GWHPDRKWIFSGANDKSICM 344
D + + V W+ S C VY+ G LG V+C HP ++ + S +DK+I +
Sbjct: 266 RDNYITAGSADRFVYVWNAKSRAC--VYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Query: 345 WEL 347
EL
Sbjct: 324 GEL 326
Score = 151 (58.2 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
I + S D FL +Q+I LWN+ GE + A KGHK + ++ F + + +
Sbjct: 39 IYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVK--FNA-DSSHLV 95
Query: 463 SGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN 522
S D V +W + I H+ VN V N P M+ SASDD T+ + ++
Sbjct: 96 SAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKE 155
Query: 523 VKRK 526
+K
Sbjct: 156 AAKK 159
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 303 (111.7 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 74/302 (24%), Positives = 160/302 (52%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
+ + ++GHT + ++FS GK+L +SS D++ IW + ++ + L+GH+ V+
Sbjct: 70 KLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS---DLSCERTLTGHKLGVND 126
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
+WS+D + ++T ++ ++ ++V + + + C ++P + SG+ D+S
Sbjct: 127 FAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDES 186
Query: 342 ICMWELGGKELECWKG--QRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYI 397
+ +W++ + C K + +S + DG I + + + + D V+ +
Sbjct: 187 VRIWDV--RTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLV 244
Query: 398 EEDQTITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+++ +F S + K++L + L+ + LW+ G+ K + +Y+GH+ +++ I + F
Sbjct: 245 DDENPPVAFVKFSPNGKYILSSNLDNTLKLWDF-GKGKTLKQYQGHENNKYCIFANFSVT 303
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIR 514
+I SGSED ++Y+W+ + +++ +L GH+ AV +P +M+AS + D TIR
Sbjct: 304 GGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQ-NMIASGALEPDNTIR 362
Query: 515 IW 516
IW
Sbjct: 363 IW 364
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 57/277 (20%), Positives = 116/277 (41%)
Query: 265 GVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC 324
G L + GH K +S V +S + L T ++ V+ W++S +C LG+
Sbjct: 68 GYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDF 127
Query: 325 GWHPDRKWIFSGANDKSICMWELGG-KELECWKGQRTLKISDLEVTSDGKQIITMCKESA 383
W D K I + ++DK++ ++E+ K + KG T + +++ + +
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGH-TNYVFCCNFNPQSSLVVSGSFDES 186
Query: 384 LLLLD-REAK-VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGE-VKLVAKY 439
+ + D R V+ +++ S +RD + + + +W+ G+ VK +
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWN 497
+ + FV S G +I S + D+ + +W + GH C+ +++
Sbjct: 247 ENPPVA-FVKFSPNG----KYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFS 301
Query: 498 PANPHMLASASDDRTIRIWGLKDLNVKRK-DCHSNGV 533
+ S S+D I +W L+ V + + H+ V
Sbjct: 302 VTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAV 338
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 299 (110.3 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 92/345 (26%), Positives = 175/345 (50%)
Query: 188 ALVLQREACMFHNS----SDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNG 243
+++L +EA N ++RD +L + + +Q L+GH E++ +F G
Sbjct: 9 SVILAQEAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQ-LEGHEGEIFTAEFHPEG 67
Query: 244 KYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW 303
+ L SS DR IW+V + + +SGH V ++ D + TC ++ + W
Sbjct: 68 ELLLSSGFDRQIYIWQVYEDCENVMA--MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFW 125
Query: 304 DVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK 362
D+++G ++ G + S G ++ + SG++D++I +W+ K TL+
Sbjct: 126 DIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKH-----AAHTLE 180
Query: 363 ISDLEVTS-----DGKQIITMCKESALLLLD-REAKVERYIE-EDQTITSFSLSRDNKFL 415
S +VT+ G+Q+I+ ++ + + D R+ V ++ TIT SLS + F+
Sbjct: 181 -SPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFI 239
Query: 416 LVNLLNQEIHLWNIE----GEVKLVAKYKGHKRS--RFVIRSCFG-GLEQAFIASGSEDS 468
L N ++ + +W++ GE + V ++GH+ + + ++R + G ++ I SGS D
Sbjct: 240 LTNAMDNTLRVWDVRPYAPGE-RCVKVFQGHQHNFEKNLLRCAWSPGSDK--ITSGSADR 296
Query: 469 QVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
VYIW + ++ LPGH+G+VN V ++P P ++ S S D+T+
Sbjct: 297 HVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEP-LILSGSSDKTL 340
Score = 148 (57.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 55/269 (20%), Positives = 117/269 (43%)
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLV-SCGWHP 328
+L GH+ + + + + LL+ G + + W V +C +V +G G V + P
Sbjct: 50 QLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYE-DCENVMAMSGHSGAVMEAHFTP 108
Query: 329 DRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
D IF+ + DK++ W++ G+ +KG ++ ++ + G+Q++ + + +
Sbjct: 109 DGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNF-VNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 388 -D-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D R+ +E +T+ + ++ ++ E+ +W+I + L +GH +
Sbjct: 168 WDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVL-HHLRGHSDT 226
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW----HRASCDLIGALPGHS-----GAVNCVSW 496
I E FI + + D+ + +W + + GH + C +W
Sbjct: 227 ---ITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRC-AW 282
Query: 497 NPANPHMLASASDDRTIRIWGLKDLNVKR 525
+P + + S S DR + IW D+N +R
Sbjct: 283 SPGSDK-ITSGSADRHVYIW---DVNTRR 307
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 57/289 (19%), Positives = 122/289 (42%)
Query: 198 FHNSSDRDMSLYTDHQCGRDQI--PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSA 255
FH + +S D Q Q+ + + GH+ V F+ +G ++ + S D++
Sbjct: 63 FHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTL 122
Query: 256 IIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEE-AVRRWDVSSGNCLHVY 314
W++ G + + GH V+ V S QQLL G ++ ++ WD + H
Sbjct: 123 AFWDI-ATG--QRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL 179
Query: 315 EKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGK 373
E C + + + SG D + +W++ + L +G I+ + ++ +G
Sbjct: 180 ESPFQVTAVC-FGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDT-ITGMSLSPEGD 237
Query: 374 QIITMCKESALLLLDRE--AKVERYIEE--------DQTITSFSLSRDNKFLLVNLLNQE 423
I+T ++ L + D A ER ++ ++ + + S + + ++
Sbjct: 238 FILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRH 297
Query: 424 IHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
+++W++ +++ K GH S + + ++ I SGS D +Y+
Sbjct: 298 VYIWDVNTR-RILYKLPGHNGS---VNAVDFSPKEPLILSGSSDKTLYL 342
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 294 (108.6 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 81/301 (26%), Positives = 154/301 (51%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
+ +L GH V+ ++F+ G +AS S+DR +W V +G L GH+ + +
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV--HGDCKNFMVLKGHKNAILDLH 103
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKW---IFSGANDK 340
W+SD Q+++ ++ VR WDV +G + + + SC P R+ I SG++D
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCC--PTRRGPPLIISGSDDG 161
Query: 341 SICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIE 398
+ +W++ + ++ + + +I+ + + +I T ++ + + D R+ + +E
Sbjct: 162 TAKLWDMRQRGAIQTFPDK--YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLE 219
Query: 399 EDQ-TITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKGHKRS-RFVIRSCF 453
Q TIT SLS D +LL N ++ ++ +W++ + + V ++GH+ + + C
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 279
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN-CVSWNPANPHMLASASDDRT 512
+ + +GS D V+IW S I LPGH+G+VN CV ++P P ++ S S D+
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV-FHPTEP-IIGSCSSDKN 337
Query: 513 I 513
I
Sbjct: 338 I 338
Score = 155 (59.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 61/286 (21%), Positives = 126/286 (44%)
Query: 201 SSDRDMSLYTDH-QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
S DR++ L+ H C + +L+GH + + L ++ +G + S+S D++ W+
Sbjct: 72 SHDREIFLWRVHGDC-------KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRR-WDVSSGNCLHVY-EKA 317
V+ G +K K++ H V+ + L+ G ++ + WD+ + + +K
Sbjct: 125 VET--GKQIK-KMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKY 181
Query: 318 GLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQII 376
+ VS D+ IF+G D + +W+L G+ +G + I+ + ++ DG ++
Sbjct: 182 QITAVSFSDAADK--IFTGGVDNDVKVWDLRKGEATMTLEGHQDT-ITGMSLSPDGSYLL 238
Query: 377 TMCKESALLLLDRE--AKVERYIE--E------DQTITSFSLSRDNKFLLVNLLNQEIHL 426
T ++ L + D A R ++ E ++ + S S D + ++ +H+
Sbjct: 239 TNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHI 298
Query: 427 WNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
W+ + + K GH S + C + I S S D +Y+
Sbjct: 299 WDTTSR-RTIYKLPGHTGS---VNECVFHPTEPIIGSCSSDKNIYL 340
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKL-SGHQ----KPVSC 281
L+GH D + + S +G YL ++ D +W++ K+ GHQ K +
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLK 277
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVS-CGWHPDRKWIFSGAND 339
SWS D ++ + V WD +S +Y+ G G V+ C +HP I S ++D
Sbjct: 278 CSWSPDGTKVTAGSSDRMVHIWDTTSRRT--IYKLPGHTGSVNECVFHPTEPIIGSCSSD 335
Query: 340 KSICMWEL 347
K+I + E+
Sbjct: 336 KNIYLGEI 343
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 29/99 (29%), Positives = 44/99 (44%)
Query: 421 NQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL 480
++EI LW + G+ K KGHK + + G + I S S D V W +
Sbjct: 74 DREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ---IVSASPDKTVRAWDVETGKQ 130
Query: 481 IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
I + HS VN P ++ S SDD T ++W ++
Sbjct: 131 IKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMR 169
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 290 (107.1 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 73/297 (24%), Positives = 152/297 (51%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GHT + +FS GKYL +SS D++ IW +D + + L+GH+ V+ ++WSS
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD---HMICERTLTGHKLGVNDIAWSS 139
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + +++ ++ ++ +++ + + + C ++P + SG+ D+S+ +W+
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
Query: 347 LGGKELECWKG--QRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQT 402
+ K C K + +S + DG I + + + + D ++ ++++
Sbjct: 200 V--KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 403 ITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+F S + K++L + L+ + LW+ + K + +Y GH+ S++ I + F +I
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFS-KGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 516
SGSED ++YIW+ + +++ L GH+ V +P +++AS + D I IW
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQ-NIIASGALEPDNKIHIW 372
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/243 (23%), Positives = 111/243 (45%)
Query: 196 CMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSA 255
C+ S D+ + ++ + + SR + L+GH + V+ F+ + S S D S
Sbjct: 143 CVVSASDDKTLKIF-------EIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 256 IIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY- 314
IW D+ G+ +K L H PVS VS++ D + + + VR WD ++G C+
Sbjct: 196 RIW--DVKTGMCIK-TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLV 252
Query: 315 --EKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLK---ISDLEV 368
E + V + P+ K+I + D ++ +W+ GK L+ + G K ++ V
Sbjct: 253 DDENPPVAFVK--FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSV 310
Query: 369 TSDGKQIITMCKESALLLLDREAK-VERYIE-EDQTITSFSLSRDNKFLLVNLL--NQEI 424
T GK II+ ++ + + + + + + + +E Q + + + L + +I
Sbjct: 311 TG-GKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 425 HLW 427
H+W
Sbjct: 370 HIW 372
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 46/255 (18%), Positives = 106/255 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH K +S +S + L T ++ V+ W++ C LG+ W D +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 332 WIFSGANDKSICMWELGGKEL-ECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
+ S ++DK++ ++E+ + + KG + +++ + ++ + D +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 391 AK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGE-VKLVAKYKGHKRSR 446
++ +++ S +RD + + + +W+ G+ +K + + +
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA- 260
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANPHML 504
FV S G +I + + DS + +W + + GH + C+ +++ +
Sbjct: 261 FVKFSPNG----KYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 505 ASASDDRTIRIWGLK 519
S S+D I IW L+
Sbjct: 317 ISGSEDCKIYIWNLQ 331
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 44/218 (20%), Positives = 99/218 (45%)
Query: 323 SCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKES 382
S + P K++ + + DK++ +W + E L ++D+ +SD + +++ +
Sbjct: 92 SAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDK 151
Query: 383 ALLLLDR-EAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYK 440
L + + +++ + ++ + + + + + ++ ++ + +W+++ + +
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM-CIKTLP 210
Query: 441 GHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL-PGHSGAVNCVSWNPA 499
H S V F + + IASGS D V IW A+ I L + V V ++P
Sbjct: 211 AH--SDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 500 NPHMLASASDDRTIRIWGL-KDLNVKRKDCHSNGVHYC 536
++LAS D T+++W K +K+ H N YC
Sbjct: 268 GKYILASNLDS-TLKLWDFSKGKTLKQYTGHENS-KYC 303
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 290 (107.1 bits), Expect = 4.8e-25, P = 4.8e-25
Identities = 73/297 (24%), Positives = 152/297 (51%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GHT + +FS GKYL +SS D++ IW +D + + L+GH+ V+ ++WSS
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD---HMICERTLTGHKLGVNDIAWSS 139
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + +++ ++ ++ +++ + + + C ++P + SG+ D+S+ +W+
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWD 199
Query: 347 LGGKELECWKG--QRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQT 402
+ K C K + +S + DG I + + + + D ++ ++++
Sbjct: 200 V--KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENP 257
Query: 403 ITSF-SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+F S + K++L + L+ + LW+ + K + +Y GH+ S++ I + F +I
Sbjct: 258 PVAFVKFSPNGKYILASNLDSTLKLWDFS-KGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS--DDRTIRIW 516
SGSED ++YIW+ + +++ L GH+ V +P +++AS + D I IW
Sbjct: 317 ISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQ-NIIASGALEPDNKIHIW 372
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 57/243 (23%), Positives = 111/243 (45%)
Query: 196 CMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSA 255
C+ S D+ + ++ + + SR + L+GH + V+ F+ + S S D S
Sbjct: 143 CVVSASDDKTLKIF-------EIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESV 195
Query: 256 IIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY- 314
IW D+ G+ +K L H PVS VS++ D + + + VR WD ++G C+
Sbjct: 196 RIW--DVKTGMCIK-TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLV 252
Query: 315 --EKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLK---ISDLEV 368
E + V + P+ K+I + D ++ +W+ GK L+ + G K ++ V
Sbjct: 253 DDENPPVAFVK--FSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSV 310
Query: 369 TSDGKQIITMCKESALLLLDREAK-VERYIE-EDQTITSFSLSRDNKFLLVNLL--NQEI 424
T GK II+ ++ + + + + + + + +E Q + + + L + +I
Sbjct: 311 TG-GKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 425 HLW 427
H+W
Sbjct: 370 HIW 372
Score = 120 (47.3 bits), Expect = 0.00031, P = 0.00031
Identities = 46/255 (18%), Positives = 106/255 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH K +S +S + L T ++ V+ W++ C LG+ W D +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 332 WIFSGANDKSICMWELGGKEL-ECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
+ S ++DK++ ++E+ + + KG + +++ + ++ + D +
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNY-VFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Query: 391 AK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGE-VKLVAKYKGHKRSR 446
++ +++ S +RD + + + +W+ G+ +K + + +
Sbjct: 202 TGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA- 260
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV--SWNPANPHML 504
FV S G +I + + DS + +W + + GH + C+ +++ +
Sbjct: 261 FVKFSPNG----KYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWI 316
Query: 505 ASASDDRTIRIWGLK 519
S S+D I IW L+
Sbjct: 317 ISGSEDCKIYIWNLQ 331
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 44/218 (20%), Positives = 99/218 (45%)
Query: 323 SCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKES 382
S + P K++ + + DK++ +W + E L ++D+ +SD + +++ +
Sbjct: 92 SAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDK 151
Query: 383 ALLLLDR-EAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYK 440
L + + +++ + ++ + + + + + ++ ++ + +W+++ + +
Sbjct: 152 TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGM-CIKTLP 210
Query: 441 GHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL-PGHSGAVNCVSWNPA 499
H S V F + + IASGS D V IW A+ I L + V V ++P
Sbjct: 211 AH--SDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 500 NPHMLASASDDRTIRIWGL-KDLNVKRKDCHSNGVHYC 536
++LAS D T+++W K +K+ H N YC
Sbjct: 268 GKYILASNLDS-TLKLWDFSKGKTLKQYTGHENS-KYC 303
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 288 (106.4 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 82/311 (26%), Positives = 158/311 (50%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 52 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK- 107
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 108 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 162
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P
Sbjct: 282 VHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 501 PHMLASASDDR 511
P +L+++SD R
Sbjct: 341 PIILSASSDKR 351
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
A F+++SD+ +S D+ D ++ ++GH D V L S G YL S++ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 254 SAIIWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
+ +W+V V + + + +K + SWS D ++ + V WD +S
Sbjct: 259 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 309 NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L+ + +HPD I S ++DK + M E+
Sbjct: 319 RILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 129 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 185
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 186 -AAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 244 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 273
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 288 (106.4 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 82/311 (26%), Positives = 158/311 (50%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 52 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK- 107
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 108 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 162
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGN 281
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P
Sbjct: 282 VHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 501 PHMLASASDDR 511
P +L+++SD R
Sbjct: 341 PIILSASSDKR 351
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
A F+++SD+ +S D+ D ++ ++GH D V L S G YL S++ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 254 SAIIWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
+ +W+V V + + + +K + SWS D ++ + V WD +S
Sbjct: 259 TVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 309 NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L+ + +HPD I S ++DK + M E+
Sbjct: 319 RILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 129 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 185
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 186 -AAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 244 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 273
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 288 (106.4 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 82/311 (26%), Positives = 158/311 (50%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 52 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK- 107
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 108 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 162
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P
Sbjct: 282 VHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 340
Query: 501 PHMLASASDDR 511
P +L+++SD R
Sbjct: 341 PIILSASSDKR 351
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
A F+++SD+ +S D+ D ++ ++GH D V L S G YL S++ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 254 SAIIWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
+ +W+V V + + + +K + SWS D ++ + V WD +S
Sbjct: 259 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 309 NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L+ + +HPD I S ++DK + M E+
Sbjct: 319 RILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 129 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 185
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 186 -AAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 244 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 273
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 287 (106.1 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 82/311 (26%), Positives = 158/311 (50%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 52 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK- 107
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 108 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 162
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P
Sbjct: 282 VHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDE 340
Query: 501 PHMLASASDDR 511
P +L+++SD R
Sbjct: 341 PIILSASSDKR 351
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
A F+++SD+ +S D+ D ++ ++GH D V L S G YL S++ D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 254 SAIIWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
+ +W+V V + + + +K + SWS D ++ + V WD +S
Sbjct: 259 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 309 NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L+ + +HPD I S ++DK + M E+
Sbjct: 319 RVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 129 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 185
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 186 -AAVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 244 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 273
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 286 (105.7 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 83/300 (27%), Positives = 151/300 (50%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKHKLSGHQKPVSC 281
+ +L GH EV+ +F NG LASS DR ++W V D TLK GH V
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLK----GHSGAVME 104
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKW---IFSGAN 338
+ +++D L + ++ V WD +G + + + SC P R+ +G++
Sbjct: 105 LHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSC--FPARRGPQLACTGSD 162
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYI 397
D ++ +W++ K+ Q T ++ + QII+ ++ + + D R+ K+ +
Sbjct: 163 DGTVKLWDIR-KKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM 221
Query: 398 E-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG--HKRSRFVIRS 451
+ ++T SLS D +LL N ++ + +W+I + + V ++G H + ++R
Sbjct: 222 QGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLR- 280
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
C + + IA+GS D VYIW + ++ LPGH+G+VN V+++P P +L+ +SD R
Sbjct: 281 CSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKR 340
Score = 170 (64.9 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 63/258 (24%), Positives = 118/258 (45%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV-SCVSWS 285
L+GH+ V L ++ +G L S+S D++ +W D G +K +L GH V SC
Sbjct: 95 LKGHSGAVMELHYNTDGSLLFSASTDKTVCVW--DSETGERVK-RLKGHTSFVNSCFPAR 151
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
Q T + V+ WD+ +H ++ ++S ++ I SG D I +W
Sbjct: 152 RGPQLACTGSDDGTVKLWDIRKKASVHTFQNT-YQVLSVTFNDTSDQIISGGIDNDIKVW 210
Query: 346 ELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE--AKVERYIEEDQ- 401
+L K + +G ++ L +++DG +++ ++++ + D A ER ++ Q
Sbjct: 211 DLRQNKLIYSMQGHGD-SVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQG 269
Query: 402 TITSF-------SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
+ +F S S D + ++ +++W+ ++V K GH S V F
Sbjct: 270 NVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTR-RIVYKLPGHAGS--VNEVAFH 326
Query: 455 GLEQAFIASGSEDSQVYI 472
E+ + SGS D ++YI
Sbjct: 327 P-EEPIVLSGSSDKRLYI 343
Score = 153 (58.9 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 60/260 (23%), Positives = 120/260 (46%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLV-SCGWHPD 329
LSGH+ V C + + L + G + + W+V G+C + G G V ++ D
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHYNTD 110
Query: 330 RKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQII-TMCKESALLLL 387
+FS + DK++C+W+ G+ ++ KG + ++ G Q+ T + + L
Sbjct: 111 GSLLFSASTDKTVCVWDSETGERVKRLKGHTSF-VNSCFPARRGPQLACTGSDDGTVKLW 169
Query: 388 D--REAKVERYIEEDQTIT-SFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR 444
D ++A V + Q ++ +F+ + D ++ ++ +I +W++ + KL+ +GH
Sbjct: 170 DIRKKASVHTFQNTYQVLSVTFNDTSDQ--IISGGIDNDIKVWDLR-QNKLIYSMQGHGD 226
Query: 445 SRFVIRSCFGGLEQAFIASGSEDSQVYIWH------RASCDLIGALPGHSGAVNCV--SW 496
S + + +++ S S D+ V +W + C I H+ N + SW
Sbjct: 227 S---VTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 497 NPANPHMLASASDDRTIRIW 516
+ A+ +A+ S DR + IW
Sbjct: 284 S-ADGSKIAAGSADRFVYIW 302
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 198 FHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
F+++SD+ +S D+ D ++ + +QGH D V L S +G YL S+S D S
Sbjct: 191 FNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVR 250
Query: 257 IWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL 311
+W++ V + + + +K + SWS+D ++ + V WD ++
Sbjct: 251 VWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTRRI- 309
Query: 312 HVYEKAG-LGLVS-CGWHPDRKWIFSGANDKSICMWEL 347
VY+ G G V+ +HP+ + SG++DK + + E+
Sbjct: 310 -VYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Score = 131 (51.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/211 (21%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I MW + G +C + TLK + +L +DG + +
Sbjct: 62 CKFHPNGATLASSGYDRLILMWNVYG---DC-ENYATLKGHSGAVMELHYNTDGSLLFSA 117
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S F R + + + LW+I +
Sbjct: 118 STDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKK--- 174
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + V+ F I SG D+ + +W LI ++ GH +V +S
Sbjct: 175 -ASVHTFQNTYQVLSVTFNDTSDQII-SGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLS 232
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L+++ D+ ++R+W ++ K +
Sbjct: 233 LSADGSYLLSNSMDN-SVRVWDIRPFAPKER 262
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 286 (105.7 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 81/311 (26%), Positives = 158/311 (50%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 51 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK- 106
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 107 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 161
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 280
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P
Sbjct: 281 VHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 339
Query: 501 PHMLASASDDR 511
P +++++SD R
Sbjct: 340 PIIISASSDKR 350
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/159 (25%), Positives = 71/159 (44%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
A F+++SD+ +S D+ D ++ ++GH D V L S G YL S++ D
Sbjct: 198 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 257
Query: 254 SAIIWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
+ +W+V V + + + +K + SWS D ++ + V WD +S
Sbjct: 258 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 317
Query: 309 NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L+ + +HPD I S ++DK + M E+
Sbjct: 318 RILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 72 CKFHPNGSTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 127
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 128 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 184
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 185 -AAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 243 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 272
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 284 (105.0 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 80/306 (26%), Positives = 152/306 (49%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHK-LSGHQKPVSCV 282
+Q++ GH E++ +F+ G LAS +D+ +W V G + + L GH+ + +
Sbjct: 56 MQLI-GHKGEIYSCKFNSYGTALASGGSDKEIFLWNVY---GECINYSVLKGHKGTILEL 111
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCL-HVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
WS+D ++ T ++++ WD + G + + E +G+ C + SG++D+S
Sbjct: 112 HWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRS 171
Query: 342 ICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD---REAKVERYIE 398
+++ K Q ++ + + Q+IT ++ + + D +E +
Sbjct: 172 ARIFDTRSKG-STHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLAS 230
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV---KLVAKYKGHKRS--RFVIRSCF 453
TITS S+S+D +LL N ++ +W+I + + + G + + + +I+S +
Sbjct: 231 HQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSW 290
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
++ I GS D QVYIW + L LPGHSG VN V+++P P ++AS S D+TI
Sbjct: 291 S-IDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEP-IIASCSSDKTI 348
Query: 514 RIWGLK 519
+ +K
Sbjct: 349 YLGEIK 354
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 310 (114.2 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 96/363 (26%), Positives = 164/363 (45%)
Query: 183 HLVEQA-LVLQREACMFHNSSDRDMSLYTDHQCGRDQIP------SRTLQILQGHTDEVW 235
HL E A L L MF ++ + G Q+P S Q L+ H V
Sbjct: 695 HLAETAPLQLYSSGLMFSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVE 754
Query: 236 FLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCG 295
+ FS +GK L S S D + IW+ G L L GH V +++S D + L +
Sbjct: 755 SVVFSPDGKQLVSGSYDDTVKIWD-PATG--ELLQTLDGHSGTVESLAFSPDGKLLASGS 811
Query: 296 VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECW 355
+ + WD ++G L +E + S + PD K + S ++D +I +W+L EL+
Sbjct: 812 YDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQT 871
Query: 356 KGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIE-EDQTITSFSLSRDNK 413
+ + + + DGK + + +S + + + ++++ +E + S + S D K
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK 931
Query: 414 FLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
L + LWN GE L+ +GH +S +RS + +AS S D+ + +
Sbjct: 932 KLASGSEKNTVKLWNPATGE--LLQTLEGHSQS---VRSVAFSPDGKQLASSSSDTTIKL 986
Query: 473 WHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRK-DCHSN 531
W+ + +L GH + V+++P H L S SDD TI++W L +++ + HS
Sbjct: 987 WNSTTGELQQTFKGHDLWIRAVAFSPDGKH-LVSGSDDNTIKLWDLATSELQQSLEDHSR 1045
Query: 532 GVH 534
VH
Sbjct: 1046 SVH 1048
Score = 304 (112.1 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 85/295 (28%), Positives = 148/295 (50%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
Q L+G + V + FS +GK LAS S + +W G L L GH + V V++
Sbjct: 912 QSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWN-PATG--ELLQTLEGHSQSVRSVAF 968
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
S D +QL + + ++ W+ ++G ++ L + + + PD K + SG++D +I +
Sbjct: 969 SPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKL 1028
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIE-EDQT 402
W+L EL+ + + + + D KQ+ + +S + L D +++R +E Q
Sbjct: 1029 WDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQG 1088
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ S + S D K L N + I LWN + GE++ G RS +V F + +
Sbjct: 1089 VRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLT--G--RSDWVDSVAFSP-DGKQL 1143
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
ASG DS + +W A+ +L+ L GHS + V ++P + +LAS S D+T ++W
Sbjct: 1144 ASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAKLW 1197
Score = 265 (98.3 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 80/297 (26%), Positives = 144/297 (48%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
LQ L+GH+ V + FS +GK LASSS+D + +W G L+ GH + V+
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWN-STTG--ELQQTFKGHDLWIRAVA 1009
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
+S D + L++ + ++ WD+++ E + + + PD K + S + D +I
Sbjct: 1010 FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIK 1069
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYIE-EDQ 401
+W+ EL+ + + + + DGK + + + + L + ++++ +
Sbjct: 1070 LWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSD 1129
Query: 402 TITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHK-RSRFVIRSCFGGLEQA 459
+ S + S D K L + I LW+ GE L+ +GH R + V+ S G L
Sbjct: 1130 WVDSVAFSPDGKQLASGYYDSTIKLWDSATGE--LLQTLEGHSDRIQSVVFSPDGKL--- 1184
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ASGS D +W A+ +L+ GHS V V+++P + +LAS+S TI++W
Sbjct: 1185 -LASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP-DGKLLASSSYGETIKLW 1239
Score = 244 (91.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 79/298 (26%), Positives = 144/298 (48%)
Query: 225 QILQGHTDEVWF--LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCV 282
Q +GH ++W + FS +GK+L S S+D + +W++ + L+ L H + V V
Sbjct: 996 QTFKGH--DLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS---ELQQSLEDHSRSVHAV 1050
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
++S DD+QL + ++ ++ WD ++G E G+ S + PD K + S + D +I
Sbjct: 1051 AFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTI 1110
Query: 343 CMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIE-E 399
+W L G+ + G R+ + + + DGKQ+ + +S + L D ++ + +E
Sbjct: 1111 KLWNPLTGELQQTLTG-RSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGH 1169
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQ 458
I S S D K L +Q LW+ GE L+ ++GH S++V F +
Sbjct: 1170 SDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGE--LLQIFEGH--SKWVESVAFSP-DG 1224
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+AS S + +W + +L+ L + V+++P + + LAS D +IW
Sbjct: 1225 KLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSP-DGNRLASV-DIFDTKIW 1280
Score = 186 (70.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 61/233 (26%), Positives = 112/233 (48%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L+GH+ V + FS +GK LAS+S D + +W L G L+ L+G
Sbjct: 1072 DSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN-PLTG--ELQQTLTGRS 1128
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSG 336
V V++S D +QL + + ++ WD ++G L E + S + PD K + SG
Sbjct: 1129 DWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASG 1188
Query: 337 ANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--V 393
+ D++ +W+ G+ L+ ++G + + + DGK + + + L D +
Sbjct: 1189 SYDQTAKLWDPATGELLQIFEGHSKW-VESVAFSPDGKLLASSSYGETIKLWDPVTGELL 1247
Query: 394 ERYIEEDQTITSFSLSRD-NKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKR 444
+ + D++ S + S D N+ V++ + +I W+ GE L+ KGH +
Sbjct: 1248 QTLNDPDESAGSVAFSPDGNRLASVDIFDTKI--WDPATGE--LLQALKGHSK 1296
Score = 181 (68.8 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 70/276 (25%), Positives = 120/276 (43%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D S Q L+ H+ V + FS + K LASSS D + +W+ G L+ L GH
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD-SATG--ELQRTLEGHS 1086
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSG 336
+ V V++S D + L + + ++ W+ +G + S + PD K + SG
Sbjct: 1087 QGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASG 1146
Query: 337 ANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVE 394
D +I +W+ G+ L+ +G +I + + DGK + + + L D ++
Sbjct: 1147 YYDSTIKLWDSATGELLQTLEGHSD-RIQSVVFSPDGKLLASGSYDQTAKLWDPATGELL 1205
Query: 395 RYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSC 452
+ E + + S + S D K L + + I LW+ + GE L+ S +
Sbjct: 1206 QIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGE--LLQTLNDPDESAGSVAFS 1263
Query: 453 FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
G A + + IW A+ +L+ AL GHS
Sbjct: 1264 PDGNRLASV----DIFDTKIWDPATGELLQALKGHS 1295
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 186 (70.5 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 369 TSDGKQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLW 427
T K++IT + + D R + Y E+ I+S S+++D K + + ++ + L
Sbjct: 177 THTQKEVITSSVDGCIRTYDVRMGTLVTY-EDTIPISSVSITKDKKCFIASCTDETVKLI 235
Query: 428 NIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH 487
+I+ + + +YKGHK + I SC + + I SGSED+ YI+ S L+ L GH
Sbjct: 236 DIDS-YETLKEYKGHKNKVYKINSC-SNFDDSLIISGSEDNDFYIYELLSGKLLSKLSGH 293
Query: 488 SGAVNCVSWNPANPHMLASASDDRTIRIW 516
S + V +P+ + S S D TIRIW
Sbjct: 294 SNIITHVDSHPSKNQFITS-STDCTIRIW 321
Score = 146 (56.5 bits), Expect = 5.2e-23, Sum P(2) = 5.2e-23
Identities = 39/154 (25%), Positives = 78/154 (50%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L H+ V ++++ +G Y S S+D+S ++ V G + H H + +
Sbjct: 8 KVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVS-KGSMI--HSFEEHGYGIGDLVS 64
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLV-SCGWHPDRKWIFSGANDKSIC 343
+SD++QL +C E+ + +WD++SG + ++ A + S + D +FSG++D+ +
Sbjct: 65 TSDNKQLFSCA-EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDRLVK 123
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIIT 377
W+L RT I+ +++ D K IT
Sbjct: 124 AWDL-----------RTKSINPVQILDDAKDTIT 146
Score = 74 (31.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 27/121 (22%), Positives = 54/121 (44%)
Query: 360 TLKISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEEDQTITSF-SLSR-DNKFL 415
T+ IS + +T D K I C + + L+D ++ ++ Y + S S D+ +
Sbjct: 208 TIPISSVSITKDKKCFIASCTDETVKLIDIDSYETLKEYKGHKNKVYKINSCSNFDDSLI 267
Query: 416 LVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+ + + +++ + KL++K GH S + + FI S S D + IW +
Sbjct: 268 ISGSEDNDFYIYELLSG-KLLSKLSGH--SNIITHVDSHPSKNQFITS-STDCTIRIWDQ 323
Query: 476 A 476
+
Sbjct: 324 S 324
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 277 (102.6 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 81/311 (26%), Positives = 156/311 (50%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F G LAS+ DR ++W V D + TLK
Sbjct: 78 RCSSLQAP---IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLK- 133
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 134 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 188
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 189 RGPQLVCTGSDDGTVKLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 247
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 248 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGN 307
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA GS D VY+W S ++ LPGH+G+VN ++++P
Sbjct: 308 VHNFEKNLLR-CSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEE 366
Query: 501 PHMLASASDDR 511
P +L+++SD R
Sbjct: 367 PIILSASSDKR 377
Score = 127 (49.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
A F+++SD+ +S D+ D ++ ++GH D V L S G YL S++ D
Sbjct: 225 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 254 SAIIWEV----DLNGGVTL-KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
+ IW+V V + + + +K + SWS D ++ + V WD +S
Sbjct: 285 TVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSR 344
Query: 309 NCLHVYEKAG-LGLVS-CGWHPDRKWIFSGANDKSICMWEL 347
L Y+ G G V+ +HP+ I S ++DK + M E+
Sbjct: 345 RIL--YKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Score = 125 (49.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 45/211 (21%), Positives = 90/211 (42%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 99 CKFHPWGNTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 154
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 155 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 211
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 212 -AAVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 269
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+RIW ++ K +
Sbjct: 270 LSSEGSYLLSNAMDN-TVRIWDVRPFAPKER 299
>SGD|S000000544 [details] [associations]
symbol:GID7 "Subunit of GID Complex that binds directly to
central component Vid30p" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0045721 "negative
regulation of gluconeogenesis" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0034657 "GID complex"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000544 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:X59720 EMBL:BK006937 GO:GO:0045721
GeneTree:ENSGT00530000063585 GO:GO:0034657 PIR:S74281
RefSeq:NP_009891.1 ProteinModelPortal:P25569 SMR:P25569
DIP:DIP-4496N IntAct:P25569 MINT:MINT-572840 STRING:P25569
PaxDb:P25569 PeptideAtlas:P25569 EnsemblFungi:YCL039W GeneID:850318
KEGG:sce:YCL039W CYGD:YCL039w eggNOG:NOG281318 HOGENOM:HOG000057092
OMA:NPNDLVP OrthoDB:EOG43R6WJ NextBio:965724 Genevestigator:P25569
GermOnline:YCL039W Uniprot:P25569
Length = 745
Score = 203 (76.5 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 45/120 (37%), Positives = 66/120 (55%)
Query: 408 LSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSED 467
+S +LV+L + E+ +W+ + + L+ KY G K+ F+IRSCF + SGSED
Sbjct: 623 ISESQHLVLVSLQDNELQMWDYKENI-LIQKYFGQKQQHFIIRSCFA-YGNKLVMSGSED 680
Query: 468 SQVYIWHRASCDLIGALPGHSGAV---------NC--VSWNPANPHMLASASDDRTIRIW 516
++YIW R +L+ L GHS + NC V+ NPA+ M AS DD I+IW
Sbjct: 681 GKIYIWDRIRGNLVSVLSGHSTVMSNSTKPMGKNCNVVASNPADKEMFASGGDDGKIKIW 740
Score = 134 (52.2 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 43/145 (29%), Positives = 73/145 (50%)
Query: 175 MIPERRLEHLVEQALVLQREACMFHN-SSDRDMSLYTD-HQCG--RDQIP---SRTLQ-- 225
++P+ RL HL++QA+ Q+ +F+ D D S + H+ +D + T Q
Sbjct: 258 LVPKGRLLHLLKQAIKYQQSQDIFNIIDPDDDASFSSPPHRINLLQDNFSHDLTVTFQEW 317
Query: 226 -ILQGHTDEVWFLQFSHNGKYLASSSND--RSAIIWEVDLNGGVTLKHKLSGHQKPVSCV 282
+Q TDE+WFL FS NGKYLAS++++ R I D+ + + V +
Sbjct: 318 KTIQDTTDEIWFLTFSPNGKYLASATSESSRGYFITVYDVEQDFKIYKTCVSLSQSVLYL 377
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSS 307
+S D + L+ C E V +D+++
Sbjct: 378 MFSPDSRYLVACPFSEDVTIYDMNA 402
Score = 45 (20.9 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 11 EDVIGPA--GVIKRVEFVRIIAKALYSLGYTKSGAHLEEESG-IPLHSSMVNLFTQQILD 67
E+ P+ G + + +++ L LGY + L ESG S+ + F + I
Sbjct: 16 EETASPSSVGCFDKKQLTKLLIHTLKELGYDSAANQLLLESGGYQNESNHIQTFFKLIKT 75
Query: 68 GHW 70
G +
Sbjct: 76 GQF 78
Score = 37 (18.1 bits), Expect = 7.4e-05, Sum P(3) = 7.4e-05
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 329 DRKWIFSGANDKSICMWEL 347
D++ SG +D I +W++
Sbjct: 724 DKEMFASGGDDGKIKIWKI 742
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 262 (97.3 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 74/304 (24%), Positives = 142/304 (46%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L L GH+ E++ +F+ G+Y+AS S DRS ++W NG LSGH+ + +
Sbjct: 53 LMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRA--NGDCENYGILSGHRGAILDLQ 110
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY--EKAGLGLVSCGWHPDRKWIFSGANDKS 341
WS D + + + + WD+++G + Y + + + + + +FSG++D +
Sbjct: 111 WSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGE-EILFSGSDDGT 169
Query: 342 ICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REAKVERYIEE 399
I +W+ K + + ++ + ++ G +I + ++ + + D ++A V
Sbjct: 170 IGIWDPRKKHAADYI-ESDFPVTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGH 228
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF--GGLE 457
TIT+ +S D++ LL ++ W+I + + I GG +
Sbjct: 229 RDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRGGWD 288
Query: 458 QAF--IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ +A G+ D V IW + L LPGH AVNCV ++P ++ S S D+T+ +
Sbjct: 289 KEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLV 348
Query: 516 WGLK 519
L+
Sbjct: 349 GELR 352
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 256 (95.2 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 76/300 (25%), Positives = 130/300 (43%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P++ IL+GH V +F+ +G Y + DR+ +W + G+ +K S H +
Sbjct: 5 ELPTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNP--HRGILIKTYKS-HGR 61
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA 337
V V +SD+ + +CG + V WDVS+G + + + + ++ + S
Sbjct: 62 EVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAG 121
Query: 338 NDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
D+S+ +W+ +E + T + + V +II + + D E
Sbjct: 122 FDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSD 181
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
Q + S+S D +L L+ + L + GE L+ YKGH F C
Sbjct: 182 NLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGE--LLQVYKGHISKSFKTDCCLTNS 239
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ A + GSED V+ W ++ H V VS++P ML S S D TIR+W
Sbjct: 240 D-AHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTS-SVDGTIRVW 297
Score = 132 (51.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 382 SALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG 441
SA L +EA + + + + + + D + L ++ I LWN + L+ YK
Sbjct: 2 SATELPTKEAHILK--GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGI-LIKTYKS 58
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H R +R + A S D QVY W ++ +I GH G VN V +N ++
Sbjct: 59 HGRE---VRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSS 115
Query: 502 HMLASASDDRTIRIWGLKDLNVK 524
++ SA DR++R+W + +V+
Sbjct: 116 -VVVSAGFDRSLRVWDCRSHSVE 137
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 270 (100.1 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 75/296 (25%), Positives = 141/296 (47%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+ H + + + +G + S DR+ +W D G L + L GH+ V +++
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLW--DTASGEEL-NTLEGHRNVVYAIAF 142
Query: 285 SSD-DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
++ ++ T ++ + W V +G C H + +V ++P + +G+ D +
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 344 MWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEED 400
+W++ G+E+ +G + +I L + G +IIT + +++ D + KV I
Sbjct: 203 LWDIQNGEEVYTLRGH-SAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHC 261
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
I+S S + D +L +++ LW+ K VA GH ++ SCF +
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLWDATNG-KCVATLTGHDDE--ILDSCFDYTGK-L 317
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
IA+ S D I+ A+ I L GH G ++ +S+NP H+L +SD +T RIW
Sbjct: 318 IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSD-KTARIW 372
Score = 194 (73.4 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 68/326 (20%), Positives = 134/326 (41%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDR 253
+C S DR L+ D G + L L+GH + V+ + F++ G +A+ S D+
Sbjct: 105 SCFITGSYDRTCKLW-DTASGEE------LNTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 254 SAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHV 313
+ +W V+ H GH + C+S++ + T ++ + WD+ +G ++
Sbjct: 158 TCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYT 214
Query: 314 YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDG 372
++S ++ I +G+ D ++ +W+ G+++ G +IS D
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH-CAEISSASFNWDC 273
Query: 373 KQIITMCKESALLLLDR-EAK-VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
I+T + L D K V D I K + + +++
Sbjct: 274 SLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 431 GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA 490
K +AK +GH+ + + F + + +GS D IW + + L GH+
Sbjct: 334 TR-KCIAKLEGHEGE--ISKISFNP-QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 491 VNCVSWNPANPHMLASASDDRTIRIW 516
+ ++N +++ + S D T RIW
Sbjct: 390 IFSCAFNYKG-NIVITGSKDNTCRIW 414
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 269 (99.8 bits), Expect = 4.4e-21, P = 4.4e-21
Identities = 78/301 (25%), Positives = 150/301 (49%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 51 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK- 106
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 107 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 161
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 162 RGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 220
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 221 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 280
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS D VY+W S ++ LPGH+G++N V+++P
Sbjct: 281 VHNFEKNLLR-CSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDE 339
Query: 501 P 501
P
Sbjct: 340 P 340
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 72 CKFHPNGSTLASAGFDRLILLWNVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 127
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 128 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 184
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 185 -AAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 242
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 243 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 272
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 258 (95.9 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 76/298 (25%), Positives = 142/298 (47%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GH+ EV+ ++F +++AS S DRS ++W G LSGH+ + + WS
Sbjct: 62 LTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNT--YGQCENYGILSGHKGAILDLQWSR 119
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVY--EKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
D + + + + + WD+ SG + Y + + V ++ + S ++D ++ +
Sbjct: 120 DSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKR-GQEMLVSASDDGTMGI 178
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REAKVERYIEEDQT 402
W+ KE + + L I+ + + G ++ + ++A+ + D ++A V T
Sbjct: 179 WDPRQKEAIDYL-ETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDT 237
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV---KLVAKYKGHK--RSRFVIRSCFGGLE 457
ITS +S D++ LL N + + W+I + + Y G + +IR+ +
Sbjct: 238 ITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAG 297
Query: 458 QAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRI 515
IA+GS D V +W + ++ LPGH G VN V + P N ++ SAS DR + +
Sbjct: 298 DK-IAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLML 354
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 65/292 (22%), Positives = 128/292 (43%)
Query: 242 NGKYLASSSNDRSAIIWEVDLNGGVTLK-HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAV 300
N + SS ++ V G+ +L+GH V V + Q + + ++ ++
Sbjct: 31 NSAAVVKSSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSI 90
Query: 301 RRWDVSSGNCLHVYEKAGL--GLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKG 357
W+ + G C + +G ++ W D K IFS + D ++ W++ G+ + + G
Sbjct: 91 LLWN-TYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIG 149
Query: 358 QRTLKISDLEVTSDGKQIITMCKESALL-LLD-REAKVERYIEEDQTITSFSLSRDNKFL 415
+ I+ +E++ G++++ + + + D R+ + Y+E + IT+ + S +
Sbjct: 150 HEEV-INSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAGNEV 208
Query: 416 LVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWH- 474
++ IH+W+I + +V GH + I S + + S S DS V W
Sbjct: 209 FSGGIDNAIHVWDIRKKA-IVYSMAGHMDT---ITSLEVSPDSQTLLSNSFDSTVRTWDI 264
Query: 475 RASCDLIGALPGHSGAV-----NCV--SWNPANPHMLASASDDRTIRIWGLK 519
R + + GA N + SWNPA +A+ S DR++ +W K
Sbjct: 265 RPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDK-IAAGSGDRSVVVWDFK 315
Score = 134 (52.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 60/284 (21%), Positives = 118/284 (41%)
Query: 201 SSDRDMSLYTDH-QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
S DR + L+ + QC IL GH + LQ+S + K + S+S D + W
Sbjct: 85 SMDRSILLWNTYGQC-------ENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASW- 136
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRR-WDVSSGNCLHVYEKAG 318
D+ G ++ + GH++ ++ V S Q++L ++ WD + Y +
Sbjct: 137 -DIESGQRIRRYI-GHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAID-YLETE 193
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
L + + +FSG D +I +W++ K + I+ LEV+ D + +++
Sbjct: 194 LPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSN 253
Query: 379 CKESALLLLDRE--AKVERYIEE--------DQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
+S + D A R+I ++ + S + + ++ + +W+
Sbjct: 254 SFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWD 313
Query: 429 IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
+ K++ K GHK + +R F + I S S D + +
Sbjct: 314 FKTG-KILYKLPGHKGTVNDVR--FTPNNEPIIVSASSDRNLML 354
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 242 (90.2 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 80/313 (25%), Positives = 145/313 (46%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L L+GH D VW + ++ +G LAS D+S +W ++ V L GHQ+ V VS
Sbjct: 6 LSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVS 65
Query: 284 WSSDDQQLLTCGVEEAV---RRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
WS+ + L + + RR D + +C + E + +CGW P +++ + + DK
Sbjct: 66 WSNCGRYLASSSFDGTTCIWRRQDDTFESCATL-EGHENEVKACGWSPSGRFLATCSRDK 124
Query: 341 SICMWELG-GKELECWKGQRTLKISDLEVT---SDGKQIITMCKESALLLLDREAKV-ER 395
++ +WE+G +E EC Q T D++ D ++ + ++ + E +
Sbjct: 125 TVWIWEVGEDEEFECASVQ-TCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQC 183
Query: 396 YIEEDQ---TITSFSLSRDNKFLLVNLL-NQEIHLWNIEGEVK---LVAKYKGHKRSRFV 448
Y D+ T+ S + L + + +++W +G+ + L + H R +
Sbjct: 184 YCTLDKHASTVWGLSFGPGPEPQLASCAADGSVYVWGTKGDRRSWELCGTLERHPRPVYD 243
Query: 449 IRSCFGGLEQAFIASGSEDS--QVYIWHRASCDL-IGAL--PGHSGAVNCVSWNPANPHM 503
+ C + F+A+ D+ +V++ C +G HS VN VSW+P+ +
Sbjct: 244 VSWC---RTRGFLATACGDNAVRVFVKDGGDCSWRLGCTLTQAHSQDVNSVSWSPSGG-L 299
Query: 504 LASASDDRTIRIW 516
LASA DD +R+W
Sbjct: 300 LASAGDDGYVRLW 312
>GENEDB_PFALCIPARUM|PFL0970w [details] [associations]
symbol:PFL0970w "pre-mRNA splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0005681
"spliceosomal complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188
KO:K12816 HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 263 (97.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 79/307 (25%), Positives = 139/307 (45%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P + + +GH V ++F G YL S+S D + +W V + +K GH K
Sbjct: 318 PKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYK--GHFKG 375
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD--RKWIFSG 336
V V + +D L+C + V WD G +Y + C +PD ++ G
Sbjct: 376 VKDVLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCLC-LNPDDTNTFLVGG 434
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE-R 395
AN+K IC + +E + I+ + + + K++I+ + + + + V +
Sbjct: 435 ANNK-ICHIDFRTGNIELEYNEHLQAINTITLCENNKKLISTSDDKKIFIWEYGLPVVVK 493
Query: 396 YIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR- 450
YI + +ITS S+ N F L +N I ++ G+ +L +K +KGH + I
Sbjct: 494 YISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKKTFKGHHNIGYSINV 553
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA-VNCVSWNPANPHMLASASD 509
SC + ++ SG + ++IW+ + H ++CV W+P MLA+AS
Sbjct: 554 SCSN--DGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCV-WHPFKTSMLATASW 610
Query: 510 DRTIRIW 516
D TI++W
Sbjct: 611 DGTIKLW 617
>UNIPROTKB|Q8I5L1 [details] [associations]
symbol:PFL0970w "Pre-mRNA splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AE014188 KO:K12816
HOGENOM:HOG000214672 RefSeq:XP_001350600.1
ProteinModelPortal:Q8I5L1 IntAct:Q8I5L1 MINT:MINT-1599121
EnsemblProtists:PFL0970w:mRNA GeneID:811246 KEGG:pfa:PFL0970w
EuPathDB:PlasmoDB:PF3D7_1220100 ProtClustDB:CLSZ2433029
Uniprot:Q8I5L1
Length = 618
Score = 263 (97.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 79/307 (25%), Positives = 139/307 (45%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
P + + +GH V ++F G YL S+S D + +W V + +K GH K
Sbjct: 318 PKKEIHTYKGHKMGVQKIRFFPKYGNYLLSASLDNTLKLWSVYKSKSCIRTYK--GHFKG 375
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD--RKWIFSG 336
V V + +D L+C + V WD G +Y + C +PD ++ G
Sbjct: 376 VKDVLFDNDGSSFLSCSYDNNVIYWDTEYGKIKGIYNQKKTPYCLC-LNPDDTNTFLVGG 434
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE-R 395
AN+K IC + +E + I+ + + + K++I+ + + + + V +
Sbjct: 435 ANNK-ICHIDFRTGNIELEYNEHLQAINTITLCENNKKLISTSDDKKIFIWEYGLPVVVK 493
Query: 396 YIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR- 450
YI + +ITS S+ N F L +N I ++ G+ +L +K +KGH + I
Sbjct: 494 YISDASMFSITSVSVHPSNNFFLCQSMNNVITVYEATGKFRLFSKKTFKGHHNIGYSINV 553
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA-VNCVSWNPANPHMLASASD 509
SC + ++ SG + ++IW+ + H ++CV W+P MLA+AS
Sbjct: 554 SCSN--DGKYVISGDSNGGLFIWNWKKMVNFKNIKAHKNVCIDCV-WHPFKTSMLATASW 610
Query: 510 DRTIRIW 516
D TI++W
Sbjct: 611 DGTIKLW 617
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 256 (95.2 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 73/297 (24%), Positives = 140/297 (47%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+ H + + + +G + S DR+ +W D G L H L GH+ V +++
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLW--DTASGEEL-HTLEGHRNVVYAIAF 142
Query: 285 SSD-DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
++ ++ T ++ + W V +G C H + +V ++P + +G+ D +
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAK 202
Query: 344 MWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEED 400
+W++ G+E+ G + +I L + G +IIT + + + + + KV I
Sbjct: 203 LWDIQSGEEVFTLTGH-SAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
I+S + D +L +++ LW+ + G K VA GH ++ SCF +
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNG--KCVATLTGHDDE--ILDSCFDYTGK- 316
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
IA+ S D I+ A+ + + L GH G ++ +S+NP +L +SD +T RIW
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSD-KTARIW 372
Score = 184 (69.8 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 69/326 (21%), Positives = 130/326 (39%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDR 253
+C S DR L+ D G + L L+GH + V+ + F++ G +A+ S D+
Sbjct: 105 SCFITGSYDRTCKLW-DTASGEE------LHTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 254 SAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHV 313
+ +W V+ H GH + C+S++ + T ++ + WD+ SG +
Sbjct: 158 TCKLWSVETG---KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFT 214
Query: 314 YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDG 372
++S ++ I +G+ D ++ +WE G+++ G +IS D
Sbjct: 215 LTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGH-CAEISSAVFNWDC 273
Query: 373 KQIITMCKESALLLLDR-EAK-VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
I+T + L D K V D I K + + +++
Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAA 333
Query: 431 GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA 490
+ V K +GH+ + + F + +GS D IW + + L GH+
Sbjct: 334 TR-ECVTKLEGHEGE--ISKISFNPQGNRLL-TGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 491 VNCVSWNPANPHMLASASDDRTIRIW 516
+ ++N ++ + S D T RIW
Sbjct: 390 IFSCAFNYKGD-IIITGSKDNTCRIW 414
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 239 (89.2 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 82/310 (26%), Positives = 144/310 (46%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P + L+ L V ++F+ +G Y + +D++ +W L G TL SGH
Sbjct: 12 ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN-PLRG--TLLRTYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V + S D+ L + G ++AV WDV+SG + + + G V+ ++ + I SG
Sbjct: 69 EVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKF-RGHAGKVNTVQFNEEATVILSG 127
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERY 396
+ D SI W+ C + +R + L+ DG + + + +L + +V RY
Sbjct: 128 SIDSSIRCWD-------C-RSRRPEPVQTLDEARDGVSSVKV-SDHEILAGSVDGRVRRY 178
Query: 397 ------IEEDQT---ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSR 446
+ D IT SRD + LV+ L+ + L + + GE L+ +YKGHK
Sbjct: 179 DLRMGQLFSDYVGSPITCTCFSRDGQCTLVSSLDSTLRLLDKDTGE--LLGEYKGHKNQE 236
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLAS 506
+ + C + + S SED +V+ W L ALP SG V ++++P P +L +
Sbjct: 237 YKLDCCLSERD-THVVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLTA 295
Query: 507 ASDDRTIRIW 516
+++ W
Sbjct: 296 MGG--SVQCW 303
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 58/251 (23%), Positives = 113/251 (45%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V ++ D LTCG ++ ++ W+ G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G DK++ +W++ G+ + ++G K++ ++ + I++ +S++ D +
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAG-KVNTVQFNEEATVILSGSIDSSIRCWDCRS--- 140
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV---IR- 450
R E QT+ +RD V + + EI +++G V+ G S +V I
Sbjct: 141 RRPEPVQTLDE---ARDG-VSSVKVSDHEILAGSVDGRVRRYDLRMGQLFSDYVGSPITC 196
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA---VNCVSWNPANPHMLASA 507
+CF Q + S S DS + + + + +L+G GH ++C + + H++ S
Sbjct: 197 TCFSRDGQCTLVS-SLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCL-SERDTHVV-SC 253
Query: 508 SDDRTIRIWGL 518
S+D + W L
Sbjct: 254 SEDGKVFFWDL 264
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 236 (88.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 78/310 (25%), Positives = 137/310 (44%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
Q+P + + V ++F+ +G YL + +D+S +W V + G LK SGH
Sbjct: 12 QLPQHLWRTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSV--SRGTLLK-TYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V S D+ QL +C ++ V WDV+SG + G V+C ++ + + SG
Sbjct: 69 EVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKL-RGHAGKVNCVQFNEEATVMLSG 127
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERY 396
+ D ++ W+ + +E I L+ + DG + + E LL + +V RY
Sbjct: 128 SIDGTVRCWDTRSRRME--------PIQILDESQDGISSLKV-SEHELLTGSVDGRVRRY 178
Query: 397 ------IEED---QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
++ D IT SRD + L + L+ + L + + +++ +Y GH +
Sbjct: 179 DLRMGQLQVDYIGSPITCVCFSRDGQCTLSSSLDSTVRLLD-KSTGEMLGEYSGHVNKGY 237
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
+ C + + S SED VY W L LP V +S++P P +L S
Sbjct: 238 KLDCCLTD-KDTHVLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSM 296
Query: 508 SDDRTIRIWG 517
+ +++WG
Sbjct: 297 --EGRVQVWG 304
Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 57/252 (22%), Positives = 121/252 (48%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V +++D LLTCG +++++ W VS G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKV 393
++DK++ +W++ G+ +G K++ ++ + +++ + + D R ++
Sbjct: 85 CSSDKTVILWDVASGQVTRKLRGHAG-KVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRM 143
Query: 394 E--RYIEEDQT-ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVI 449
E + ++E Q I+S +S LL ++ + +++ G++++ Y G +
Sbjct: 144 EPIQILDESQDGISSLKVSEHE--LLTGSVDGRVRRYDLRMGQLQV--DYIGSP----IT 195
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH--SG-AVNCVSWNPANPHMLAS 506
CF Q ++S S DS V + +++ +++G GH G ++C + + H+L S
Sbjct: 196 CVCFSRDGQCTLSS-SLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDK-DTHVL-S 252
Query: 507 ASDDRTIRIWGL 518
S+D + W L
Sbjct: 253 CSEDGHVYYWDL 264
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 247 (92.0 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 79/313 (25%), Positives = 149/313 (47%)
Query: 213 QCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKH 270
+C Q P + +L GH EV+ +F NG LAS+ DR ++W V D + TLK
Sbjct: 52 RCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLK- 107
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
GH V + +++D L + ++ V WD +G + + + SC +P R
Sbjct: 108 ---GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSC--YPAR 162
Query: 331 KW---IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ + +G++D ++ +W++ K+ Q T ++ + QII+ ++ + +
Sbjct: 163 RGPQLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Query: 388 D-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKG- 441
D R+ K+ + ++T SLS + +LL N ++ + +W++ + + V ++G
Sbjct: 222 DLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
Query: 442 -HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN 500
H + ++R C + + IA+GS DS +Y WH S +G +P H + S P
Sbjct: 282 VHNFEKNLLR-CSWSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQE 340
Query: 501 PHMLASASDDRTI 513
+ SAS D+ +
Sbjct: 341 GIXILSASSDKRL 353
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 44/211 (20%), Positives = 91/211 (43%)
Query: 324 CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITM 378
C +HP+ + S D+ I +W + G +C TLK + +L +DG + +
Sbjct: 73 CKFHPNGSTLASAGFDRLILLWSVYG---DC-DNYATLKGHSGAVMELHYNTDGSMLFSA 128
Query: 379 CKESALLLLDREA--KVERYIEEDQTITS-FSLSRDNKFLLVNLLNQEIHLWNIEGEVKL 435
+ + + D E +V+R + S + R + + + + LW+I +
Sbjct: 129 STDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK--- 185
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS 495
A + + + V+ F I SG D+ + +W L + GH+ +V +S
Sbjct: 186 -AAIQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLS 243
Query: 496 WNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
+ ++L++A D+ T+R+W ++ K +
Sbjct: 244 LSSEGSYLLSNAMDN-TVRVWDVRPFAPKER 273
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 263 (97.6 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 74/293 (25%), Positives = 141/293 (48%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH + V + FSH+ + LAS+S+D + IW+ G TL+ L GH V V +S
Sbjct: 301 LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDT-ATG--TLQRMLKGHNDSVRSVVFSH 357
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + + + + VR W+ ++G H +E +++ + D + + S ++ ++ +W+
Sbjct: 358 DSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 347 LGGKELE-CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIE-EDQTI 403
L+ +G ++ + + D + + + + + + ++R +E + +
Sbjct: 418 TRTGSLQNVLEGHDDC-VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWV 476
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIAS 463
S S D++ + + + +W+ V L + H +RS + +AS
Sbjct: 477 RSVVFSHDSRLIASASDDMTVKIWDT-ATVPLQNNLESHDNW---VRSVVFSHDSRLLAS 532
Query: 464 GSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
S+D V IW A+ L L GH VN VS++P + +LASASDD T++IW
Sbjct: 533 ASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASASDDGTVKIW 584
Score = 258 (95.9 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 79/305 (25%), Positives = 146/305 (47%)
Query: 223 TLQ-ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
TLQ +L+GH D V + FSH+ + +AS SNDR+ IWE G+ L+H H+ V
Sbjct: 338 TLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT--GL-LRHTFEDHEDSVMA 394
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
VS++ D ++L + V+ WD +G+ +V E + S + PD + + S ++D++
Sbjct: 395 VSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRT 454
Query: 342 ICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREA-KVER 395
+ +W L QRTL+ + + + D + I + + + + D ++
Sbjct: 455 VKIWHAATGSL-----QRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQN 509
Query: 396 YIEE-DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
+E D + S S D++ L + + +W+ L +GH R + S
Sbjct: 510 NLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDT-ATGSLENTLEGHD-DR--VNSVSF 565
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIR 514
+ +AS S+D V IW+ A+ + G ++++ + ++LASA DD T++
Sbjct: 566 SPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTS-NLLASAMDDGTVK 624
Query: 515 IWGLK 519
IW ++
Sbjct: 625 IWDME 629
Score = 256 (95.2 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 76/291 (26%), Positives = 134/291 (46%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH V + FSH+ + LAS+S D + IW+ + L++ L GH + V V +S D
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATS---FLQNTLEGHNEWVKSVVFSHD 316
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ L + + V+ WD ++G + + + S + D + I SG+ND+++ +WE
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIE-EDQTITS 405
L + + D +++ + + + D R ++ +E D + S
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNS 436
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
S S D++ L ++ + +W+ L +GH +RS + IAS S
Sbjct: 437 VSFSPDSRLLASASDDRTVKIWHA-ATGSLQRTLEGHNDW---VRSVVFSHDSRLIASAS 492
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+D V IW A+ L L H V V ++ + +LASASDD T++IW
Sbjct: 493 DDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH-DSRLLASASDDMTVKIW 542
Score = 191 (72.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 61/268 (22%), Positives = 122/268 (45%)
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDR 330
+ GH + V VS+S D + L + + V+ WD ++ + E + S + D
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS 317
Query: 331 KWIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR 389
+ + S ++D ++ +W+ L+ KG + + + D + I + + + + +
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHND-SVRSVVFSHDSRLIASGSNDRTVRIWET 376
Query: 390 EAKVERYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSR 446
+ R+ ED ++ + S + D++ L + +W+ G ++ V + GH
Sbjct: 377 TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLE--GHDDC- 433
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLAS 506
+ S + +AS S+D V IWH A+ L L GH+ V V ++ + ++AS
Sbjct: 434 --VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSH-DSRLIAS 490
Query: 507 ASDDRTIRIWGLKDLNVKRK-DCHSNGV 533
ASDD T++IW + ++ + H N V
Sbjct: 491 ASDDMTVKIWDTATVPLQNNLESHDNWV 518
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 243 (90.6 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 83/324 (25%), Positives = 154/324 (47%)
Query: 204 RDMSLYTDH---QCGRD-QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
+D SL T+ Q D +P+ LQ+ GHT EV +F +G Y AS DR ++W
Sbjct: 22 QDSSLITEGSVLQRTSDLNVPN--LQMF-GHTAEVLVARFDPSGSYFASGGMDRQILLWN 78
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL 319
V G V L+G + ++ + WS D + + + + WD SG + + K
Sbjct: 79 VF--GDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKH-KGHA 135
Query: 320 GLVSC--GWHPDRKWIFSGANDKSICMWELGGKELECWKG-QRTLKISDLEVTSDGKQII 376
G+V+ + + S ++D ++ +W+ K+ C K + ++ + + G Q+
Sbjct: 136 GVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKD--CIKTIEEKYPLTAVAIAQQGTQVF 193
Query: 377 TMCKESALLLLD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE---G 431
+ A+ + D R ++ ITS ++S+D LL N ++ + +++++
Sbjct: 194 IGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFAS 253
Query: 432 EVKLVAKYKG--HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ + ++G H + ++ + F+ +GS D VY+W A+ DL LPGH G
Sbjct: 254 AQRQLQIFEGAIHGQEHNLLGVAWSR-NSRFVGAGSSDKNVYVWS-ATGDLRYVLPGHEG 311
Query: 490 AVNCVSWNPANPHMLASASDDRTI 513
+VN V ++P + ++ S S DRTI
Sbjct: 312 SVNHVDFHP-HQDIILSCSSDRTI 334
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 50/259 (19%), Positives = 113/259 (43%)
Query: 271 KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL-GLVS-CGWHP 328
++ GH V + + G++ + W+V G+ + G G ++ W
Sbjct: 45 QMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVF-GDVKNYGVLNGCKGAITDLQWSR 103
Query: 329 DRKWIFSGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
D + ++ ++D + W+ + G+++ KG + ++ L+V G +++T + + +
Sbjct: 104 DSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGV-VNALDVLKVGSELLTSVSDDCTMKV 162
Query: 388 -DREAK-VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D +K + IEE +T+ ++++ + + ++ I +W++ KGHK
Sbjct: 163 WDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNN-HCSHVLKGHKD- 220
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHR---ASCD-----LIGALPGHSGAVNCVSWN 497
+I S + + + S S D+ V I+ AS GA+ G + V+W+
Sbjct: 221 --IITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWS 278
Query: 498 PANPHMLASASDDRTIRIW 516
N + + S D+ + +W
Sbjct: 279 -RNSRFVGAGSSDKNVYVW 296
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 253 (94.1 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 112/517 (21%), Positives = 219/517 (42%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L K+ L+EE+G+ L++ V+ F Q I +GHWD L
Sbjct: 5 IESADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVDGFVQDISNGHWDTVLKVTQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D+ ++ + EQ EL++ + + A ++L + P+ + + E
Sbjct: 65 SLKLPDKKLLN-----LYEQIVLELIELRE-LGAARSLLRQTDPMTMLKQQEPERYIHLE 118
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+ + ++P RL L+ QAL Q+ +
Sbjct: 119 NMLQRAYFDPREAYAEGSSKEKRRTVIAQELSGEVHVVPSSRLLALLGQALKWQQHQGLL 178
Query: 199 HNSSDRDMSLYTDHQCGRDQ----IPSRTL-QILQGHTDEVWFLQFSHNGKYLASSSNDR 253
+ D L+ +DQ P++ QI G V QFS +G+YL + S D
Sbjct: 179 PPGTTID--LFRGKAAMKDQEEEMYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDG 236
Query: 254 SAIIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSS 307
+W G V LK++ ++ V +++S D + + + + ++ W + +
Sbjct: 237 FLEVWNFT-TGKVRKDLKYQAQDQFMMMEQAVLALNFSRDSEMVASGAQDGQIKVWRIIT 295
Query: 308 GNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISD 365
G CL +EKA ++C + D + S + D ++ + L GK L+ +KG + +++
Sbjct: 296 GQCLRKFEKAHTKGITCLQFSRDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSSF-VNE 354
Query: 366 LEVTSDGKQIITMCKESALLL--LDREAKVERY--IEEDQTITSFSLSRDNK--FLLVNL 419
T DG +++ + + + L V Y + + + + + N F++ N
Sbjct: 355 ATFTPDGHSVLSASSDGTVKVWSLKTTECVATYKPLGNELAVNTVLILPKNPEHFIVCNR 414
Query: 420 LNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCD 479
N + + N++G++ V + KR S FI ED +Y + +S
Sbjct: 415 SNTVV-IMNMQGQI--VRSFSSGKREGGAFISATLSPRGEFIYCAGEDQVLYCFSVSSGK 471
Query: 480 LIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + ++LAS S+D +++W
Sbjct: 472 LERTLNVHEKDVIGLTHHP-HQNLLASYSEDGLLKLW 507
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 249 (92.7 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 72/299 (24%), Positives = 136/299 (45%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+ H + + + G + S DR+ +W D G L H L GH+ V +++
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVW--DTASGEEL-HTLEGHRNVVYAIAF 142
Query: 285 SSD-DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
++ ++ T ++ + W +G C H + +V ++P + +G+ D +
Sbjct: 143 NNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAK 202
Query: 344 MWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA--KVERYIEED 400
+W++ G+E+ G +I L + G +IIT + +++ D KV I
Sbjct: 203 LWDIQSGEEVVTLTGHLA-EIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHC 261
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
I+S S D +L +++ LW+ K VA GH ++ SCF +
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLWDATSG-KCVATLTGHDDE--ILDSCFDYTGK-L 317
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
IA+ S D +++ + I L GH G ++ +S+NP +L +SD +T RIW ++
Sbjct: 318 IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSD-KTARIWDVQ 375
Score = 175 (66.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 65/326 (19%), Positives = 131/326 (40%)
Query: 195 ACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDR 253
+C S DR ++ D G + L L+GH + V+ + F++ G +A+ S D+
Sbjct: 105 SCFITGSYDRTCKVW-DTASGEE------LHTLEGHRNVVYAIAFNNPYGDKIATGSFDK 157
Query: 254 SAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHV 313
+ +W + H GH + C+S++ + T ++ + WD+ SG +
Sbjct: 158 TCKLWSAETG---KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVT 214
Query: 314 YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDG 372
++S + I +G+ D ++ +W+ G+++ G +IS + D
Sbjct: 215 LTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGH-CAEISSALFSWDC 273
Query: 373 KQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
I+T + +L D + V D I K + + ++N
Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNAT 333
Query: 431 GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA 490
K + K +GH+ + + F + +GS D IW + + L GH+
Sbjct: 334 TR-KCITKLEGHEGE--ISKISFNPQGNRLL-TGSSDKTARIWDVQTGQCLQVLEGHTDE 389
Query: 491 VNCVSWNPANPHMLASASDDRTIRIW 516
+ ++N +++ + S D + RIW
Sbjct: 390 IFSCAFNYKG-NIVITGSKDNSCRIW 414
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 252 (93.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 88/340 (25%), Positives = 162/340 (47%)
Query: 200 NSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
N ++D ++ ++ I + L L+ HT + +++FS +GK+LA+ N R+A+++
Sbjct: 269 NREEKDWTVTSNVPNKEPPISVQLLHTLE-HTSVICYVRFSADGKFLATGCN-RAAMVFN 326
Query: 260 VDLNGGVTLKHKLSGHQKP---VSCVSWSSDDQQLLTCGVEEA-VRRWDVSSGNCLHVYE 315
V+ +TL + S ++ V V++S D + L T GVE+ +R WD++ +
Sbjct: 327 VETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLAT-GVEDQQIRIWDIAQKRVYRLLT 385
Query: 316 KAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS----- 370
+ S + D K + SG+ D+++C+W++ E Q+ + +D VT+
Sbjct: 386 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGE------QKLILHTDDGVTTVMFSP 439
Query: 371 DGKQIITMCKESALLLLDREAK-VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
DG+ I + + + VE+ ++++ S + S D K+L+ L+ I LW +
Sbjct: 440 DGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWEL 499
Query: 430 EGEVKLV-AKYK--GHKRSRFV-----IRSCFGGLEQAFIASGSEDSQVYIWHRASCDLI 481
+ + + YK G + F I S + +I SGS+D + W S
Sbjct: 500 QCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQ 559
Query: 482 GALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDL 521
L GH+ +V V+ +P N H A+ S D RIW +DL
Sbjct: 560 LTLQGHNNSVISVAVSP-NGHCFATGSGDLRARIWSYEDL 598
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 43/184 (23%), Positives = 84/184 (45%)
Query: 358 QRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQT-------ITSFSLSR 410
+ T I + ++DGK + T C +A++ K+ ++E+ + + S + S
Sbjct: 297 EHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSP 356
Query: 411 DNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQV 470
D K+L + +Q+I +W+I + ++ GH++ + + G + SGS D V
Sbjct: 357 DGKYLATGVEDQQIRIWDI-AQKRVYRLLTGHEQEIYSLDFSKDGKT---LVSGSGDRTV 412
Query: 471 YIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDCHS 530
+W + + L G V V ++P + +A+ S D+ IRIW V++ H
Sbjct: 413 CLWDVEAGEQKLILHTDDG-VTTVMFSP-DGQFIAAGSLDKVIRIWTSSGTLVEQLHGHE 470
Query: 531 NGVH 534
V+
Sbjct: 471 ESVY 474
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 250 (93.1 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 79/352 (22%), Positives = 152/352 (43%)
Query: 178 ERRLEHLVEQALVLQREACMFHNSS----DRDMSLYTDHQCGRDQIPSRTLQILQGHTDE 233
E + EH +++ +E + S +D DH C IP R + GHT
Sbjct: 229 ETKGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDH-C---YIPKRLVHTWSGHTKG 284
Query: 234 VWFLQF-SHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLL 292
V ++F G L S+ D IW+V N G ++ + GH K V + +S+D + L
Sbjct: 285 VSAIRFFPKQGHLLLSAGMDCKVKIWDV-YNSGKCMRTYM-GHAKAVRDICFSNDGSKFL 342
Query: 293 TCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD---RKWIFSGANDKSICMWELGG 349
T G ++ ++ WD +G + + + V +PD + + +G +DK I W++
Sbjct: 343 TAGYDKNIKYWDTETGQVISTFSTGKIPYV-VKLNPDDDKQNILLAGMSDKKIVQWDINT 401
Query: 350 KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE-RYIEEDQ--TITSF 406
E+ Q ++ + + ++ +T + +L + + V +YI E ++ S
Sbjct: 402 GEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 461
Query: 407 SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIRSCFGGLEQAFIASG 464
S+ + +L L+ +I +++ +L K + GH + + + F + F+ SG
Sbjct: 462 SVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSP-DGRFVMSG 520
Query: 465 SEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ + + W SC + L H+G W+P +A+ D I+ W
Sbjct: 521 DGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 572
>WB|WBGene00021482 [details] [associations]
symbol:Y39H10A.6 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0008340 GO:GO:0009792
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0000003 EMBL:FO081678
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 ProteinModelPortal:Q965W8 SMR:Q965W8 STRING:Q965W8
PaxDb:Q965W8 EnsemblMetazoa:Y39H10A.6 KEGG:cel:CELE_Y39H10A.6
UCSC:Y39H10A.6 CTD:178791 WormBase:Y39H10A.6 eggNOG:NOG285995
InParanoid:Q965W8 OMA:GTTICKE NextBio:902572 Uniprot:Q965W8
Length = 672
Score = 182 (69.1 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 99/469 (21%), Positives = 191/469 (40%)
Query: 26 VRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKIG-LVD 84
+RIIA+ L ++G T S L EE+G + ++ IL G++D ++ L +
Sbjct: 58 IRIIAQFLDNIGLTSSVETLVEETGFTIETTSGARVRANILKGNYDAAIQILETSNDHIT 117
Query: 85 ESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXXXXXXXX 144
E K S+++ K +L+ + DAL T++ I + + +S
Sbjct: 118 EETAKHGSYIVKCFKLADLVRKGRYFDALFTMQKMIRGVILDHSE--HFDYFDTFFKDVL 175
Query: 145 XXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSSDR 204
Q+I + R ++P+ RL+ ++ + A + ++
Sbjct: 176 LGNCRYQNIDQVAERQSQLAFLEEILPSDFILPQNRLKTILNKV----HGAA----ADEK 227
Query: 205 DMSLYTDHQCGRDQ-IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
L D + IP R Q+ H E++ ++FS NGK +AS S +W+ +
Sbjct: 228 APKLLRDEPSNSVKTIPWRQTQLWDHHKFEIFCVKFSRNGKMMASGGKSNSITLWKCAKS 287
Query: 264 GGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCLHVY------ 314
+ ++ ++ + + ++ LL CG + A + +D+++ + +
Sbjct: 288 KLTRIGEMAPINEGDIAYMEFCQQNKYLLICGGQMARYNLTIFDIATRSVFRMLRVNNTH 347
Query: 315 -EKAGLG-LVSCG-WHPD---RKWIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLE 367
+ +G SCG + D R + +G ++ +++L E E + Q +I L
Sbjct: 348 DDIIDIGSFFSCGSFLTDTYNRTRVVAGNEFGAMKVFDLSRGEHEPAIRQQAGFRIRCLH 407
Query: 368 VTSDGKQIITMCKESALLLLDREAKVERYIE------EDQTITSFSLSRDNKFLLVNL-L 420
G I + + + L +E E+ TI ++ + +L L
Sbjct: 408 GMRSGDSFIAVDTHNRVRLFSFANNTTENLEGTTICKEEVTIIHMTVHPSERLVLTTTEL 467
Query: 421 NQEIHLWNIEGEVKLVAKYKG----HKRSRFVIRSCFGGLEQAFIASGS 465
N + LW+I L+ + G + SR+ I S FGG+ Q FIA+GS
Sbjct: 468 N--LRLWDIRTH-NLIRIFSGACQREEFSRYQIHSSFGGVHQNFIATGS 513
Score = 119 (46.9 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 469 QVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
+V IW +L GH G VN V+WNPA+P ML S D TIR+W L
Sbjct: 534 RVVIWSVQDSRPRYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWSL 583
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 248 (92.4 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 81/306 (26%), Positives = 141/306 (46%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT--LKHKLSGHQKPVSC 281
L LQ H V + FS++GKYLA+ N RSA I++VD V + +
Sbjct: 275 LHNLQ-HNSVVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESEKDGDLYIRS 332
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
V +S D L T ++ V+ WD+ + H + L + S + D ++I SG+ DK
Sbjct: 333 VCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKK 392
Query: 342 ICMWELGGKELECWKGQRTLK----ISDLEVTSDGKQIITMCKESALLLLDREAK--VER 395
+W++ + G + ++ + ++ DG+ + ++ + L D + +ER
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLER 452
Query: 396 YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE---VKLVAKYKGHKRSRFVIRSC 452
Y ++ S + S D K L L++ + LW++ G + A + GHK FV+
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD--FVLSVA 510
Query: 453 FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPAN-PH-MLASASDD 510
F + +++ SGS+D V W + L GH +V V+ +P N H + A+ S D
Sbjct: 511 FSP-DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGD 569
Query: 511 RTIRIW 516
R+W
Sbjct: 570 FRSRLW 575
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 52/226 (23%), Positives = 105/226 (46%)
Query: 321 LVSC-GWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTS-----DGK 373
+V C + D K++ +G N +S ++++ GK++ + + K DL + S DG
Sbjct: 283 VVCCVNFSNDGKYLATGCN-RSAQIYDVDTGKKVHAFVDESE-KDGDLYIRSVCFSPDGN 340
Query: 374 QIITMCKESALLLLD-REAKVER-YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE- 430
+ T ++ + + D K++ + + I S S D +F++ +++ +W+IE
Sbjct: 341 YLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEK 400
Query: 431 GEVKLVAKYK--GHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
G+ + G K + S + +A+GS D+ V +W + + GH
Sbjct: 401 GKCAFTLGNEEVGPKNG---VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHL 457
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDCHS--NG 532
+V V+++P + LAS S D+++++W L R C + NG
Sbjct: 458 DSVYSVAFSP-DGKSLASGSLDKSLKLWDLSGSR-SRSRCRATFNG 501
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 234 (87.4 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 75/278 (26%), Positives = 133/278 (47%)
Query: 245 YLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWD 304
+L + D +W++ + + L+HKL GH V V+ SSD Q + + ++ + WD
Sbjct: 54 FLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWD 113
Query: 305 VSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW--ELGGKE--LECWKGQRT 360
SG+ H+ + L + + P K++ SG ND I M+ E G E L+ G+ T
Sbjct: 114 ARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYT 173
Query: 361 LKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIE-EDQTITSFSLSRDNKFLLVN 418
L I+ + DGK I + + + + D A KV + +E + S S +++ LL
Sbjct: 174 LSIA---YSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTA 230
Query: 419 LLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASC 478
+ + L+++ +V GH + +V+ F + F AS S D+ V IW +
Sbjct: 231 SDDGHMKLYDVTHS-DVVGTLSGH--ASWVLCVAFSEDGKHF-ASSSSDNSVKIWDTSER 286
Query: 479 DLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ H+ V V ++P N + ASAS+D+++ I+
Sbjct: 287 KCLHTFAEHTDQVWGVRYSPGNDKV-ASASEDKSLNIY 323
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + +Q L+GH V L FS N + L ++S+D +++V + V LSGH
Sbjct: 198 DVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGT---LSGHA 254
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSG 336
V CV++S D + + + +V+ WD S CLH + + + + P + S
Sbjct: 255 SWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTDQVWGVRYSPGNDKVASA 314
Query: 337 ANDKSI 342
+ DKS+
Sbjct: 315 SEDKSL 320
Score = 133 (51.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 57/253 (22%), Positives = 116/253 (45%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH V + S +G+ +ASSS D + +W D G KH LS + V +S
Sbjct: 81 LKGHALGVVSVAVSSDGQTIASSSLDSTMCLW--DARSG-DKKHLLSFGPVDLWTVQFSP 137
Query: 287 DDQQLLTCGVEEA-VRRWDVSSGNCLHVYE-KAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +++ G+ + + + V +G + + G +S + PD K+I SGA D I +
Sbjct: 138 CNKYVIS-GLNDGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITI 196
Query: 345 WELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQT 402
+++ GK ++ +G + + L + + + ++T + + L D + V + +
Sbjct: 197 FDVAAGKVVQTLEGH-AMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHAS 255
Query: 403 -ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ + S D K + + + +W+ E K + + H + +R G + +
Sbjct: 256 WVLCVAFSEDGKHFASSSSDNSVKIWDTS-ERKCLHTFAEHTDQVWGVRYSPGNDK---V 311
Query: 462 ASGSEDSQVYIWH 474
AS SED + I++
Sbjct: 312 ASASEDKSLNIYY 324
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 45/202 (22%), Positives = 103/202 (50%)
Query: 330 RKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESAL 384
+ ++ +G D + +W+L +E K + LK + + V+SDG+ I + +S +
Sbjct: 52 KDFLVTGGLDDLVKVWDL--QEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTM 109
Query: 385 LLLDREAKVERYIEEDQTITSFSL--SRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKG 441
L D + ++++ + +++ S NK+++ L + +I ++++E G+ + +
Sbjct: 110 CLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQN 169
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
K + + S G +IASG+ D + I+ A+ ++ L GH+ V + ++P N
Sbjct: 170 GKYTLSIAYSPDG----KYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP-NS 224
Query: 502 HMLASASDDRTIRIWGLKDLNV 523
+L +ASDD ++++ + +V
Sbjct: 225 QLLLTASDDGHMKLYDVTHSDV 246
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 239 (89.2 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 48/163 (29%), Positives = 87/163 (53%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GHT VW ++FS G Y ++S+D++A +W D + + +GH V CV + +
Sbjct: 556 KGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRI---FAGHINDVDCVEFHPN 612
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWE 346
+ T ++ R WDV +GNC+ V+ V+C PD +W+ SG D IC+W+
Sbjct: 613 SNYVFTGSSDKTCRMWDVHTGNCVRVF-LGHTNSVNCLAVSPDGRWLASGGEDGIICVWD 671
Query: 347 LG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD 388
+G G+ L+ +G + L + DG +++ C ++++ + D
Sbjct: 672 IGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWD 714
Score = 143 (55.4 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 35/125 (28%), Positives = 62/125 (49%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L+I GH ++V ++F N Y+ + S+D++ +W+V V + GH V+C++
Sbjct: 594 LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRV---FLGHTNSVNCLA 650
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYE-KAGLGLVSCGWHPDRKWIFSGANDKSI 342
S D + L + G + + WD+ SG L A L S + D + SG D S+
Sbjct: 651 VSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSV 710
Query: 343 CMWEL 347
+W++
Sbjct: 711 RVWDV 715
Score = 142 (55.0 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 44/165 (26%), Positives = 77/165 (46%)
Query: 371 DGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
DGK + ++ K + K+ I + S S DNK+LL ++ + LW+++
Sbjct: 491 DGKPLKSVLKRDRHKPQENTRKL---IGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLD 547
Query: 431 GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA 490
LV+ YKGH + + ++ F L F+ + S D +W + GH
Sbjct: 548 TYTALVS-YKGHTQPVWDVK--FSPLGHYFVTA-SHDQTARLWATDHIYPLRIFAGHIND 603
Query: 491 VNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDC-HSNGVH 534
V+CV ++P N + + + S D+T R+W + N R H+N V+
Sbjct: 604 VDCVEFHP-NSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVN 647
Score = 127 (49.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 52/269 (19%), Positives = 111/269 (41%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVD---LNGGVTL-KHK--- 271
+PS + + + ++F+ + +A+ D +W +D L + +HK
Sbjct: 449 LPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQE 508
Query: 272 ----LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
L GH PV VS+S D++ LL+C ++ VR W + + L Y+ + +
Sbjct: 509 NTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFS 568
Query: 328 PDRKWIFSGANDKSICMWELGG-KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
P + + ++D++ +W L + G + +E + + T + +
Sbjct: 569 PLGHYFVTASHDQTARLWATDHIYPLRIFAGHIN-DVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 387 LDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR 444
D V ++ ++ ++S D ++L + I +W+I G + + +GH R
Sbjct: 628 WDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDI-GSGRRLKSMRGHAR 686
Query: 445 SRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+ + S + + SG D+ V +W
Sbjct: 687 AS--LYSLAFSRDGTVLVSGCADNSVRVW 713
Score = 114 (45.2 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 39/197 (19%), Positives = 86/197 (43%)
Query: 328 PDRKWIFSGANDKSICMWELGG-KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
PD K++ S + DK++ +W L L +KG T + D++ + G +T + L
Sbjct: 527 PDNKYLLSCSEDKTVRLWSLDTYTALVSYKGH-TQPVWDVKFSPLGHYFVTASHDQTARL 585
Query: 387 --LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR 444
D + + + ++ ++ ++ +W++ V + GH
Sbjct: 586 WATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTG-NCVRVFLGHTN 644
Query: 445 SRFVIRSCFG-GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA-VNCVSWNPANPH 502
S +C + ++ASG ED + +W S + ++ GH+ A + ++++ +
Sbjct: 645 SV----NCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFS-RDGT 699
Query: 503 MLASASDDRTIRIWGLK 519
+L S D ++R+W +K
Sbjct: 700 VLVSGCADNSVRVWDVK 716
Score = 113 (44.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 33/113 (29%), Positives = 57/113 (50%)
Query: 196 CM-FHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
C+ FH +S+ + +D C D +++ GHT+ V L S +G++LAS D
Sbjct: 606 CVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDG 665
Query: 254 SAIIWEVDLNGGVTLKHKLSGHQKP-VSCVSWSSDDQQLLTCGVEEAVRRWDV 305
+W D+ G LK + GH + + +++S D L++ + +VR WDV
Sbjct: 666 IICVW--DIGSGRRLK-SMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 55 (24.4 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 33/108 (30%), Positives = 51/108 (47%)
Query: 27 RIIAKALYSLGYTKSGAHLE-EESGIPLHSSMVNLFTQQILDGHWDESLATLSKIGLVDE 85
RI+ + L GY ++ A L E S IP + V L T + LA++++IG D
Sbjct: 82 RIVLEYLNKKGYHRTEAQLRLESSNIP--TPAVPLATPATTE------LASVNEIG--DN 131
Query: 86 SVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVREL 133
+K EQ+ EL D + ++ K LR E +K S+ +EL
Sbjct: 132 KDLKE-KLTKAEQELKELRDKQSKIE--KELR-EAKDREVKISKEKEL 175
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 227 (85.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 80/305 (26%), Positives = 147/305 (48%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P + L+ L V ++F+ +G Y + +D++ +W L G TL SGH
Sbjct: 12 ELPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN-PLRG--TLLRTYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V + S D+ L + G ++ V WDV++G + + + G V+ ++ + I SG
Sbjct: 69 EVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKF-RGHAGKVNTVQFNEEATVILSG 127
Query: 337 ANDKSICMWELGGKELECWKGQRTLK--ISDLEVTSDGKQIITMCKESALLLLD-REAKV 393
+ D S+ W+ ++ E + + IS ++V SD +I+ + + D R +V
Sbjct: 128 SIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV-SD-HEILAGSVDGRVRRYDLRMGQV 185
Query: 394 ER-YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
Y+ T T FS RD + L++ L+ + L + + GE L+ +Y GHK ++ +
Sbjct: 186 TSDYVGSPITCTCFS--RDGQCTLISSLDSTLRLLDKDTGE--LLGEYVGHKNQKYKLDC 241
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
C + + S SED +V+ W L ALP S V ++++PA+P +L +
Sbjct: 242 CLSERD-THVVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLLTAMGG-- 298
Query: 512 TIRIW 516
+I+ W
Sbjct: 299 SIQYW 303
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/251 (23%), Positives = 113/251 (45%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V ++ D LTCG ++ ++ W+ G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G DK++ +W++ G+ + ++G K++ ++ + I++ +S++ D +
Sbjct: 85 GGGDKTVVLWDVATGQVVRKFRGHAG-KVNTVQFNEEATVILSGSIDSSVRCWDCRS--- 140
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV---IR- 450
R E QT+ +RD V + + EI +++G V+ G S +V I
Sbjct: 141 RKPEPVQTLDE---ARDG-ISSVKVSDHEILAGSVDGRVRRYDLRMGQVTSDYVGSPITC 196
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA---VNCVSWNPANPHMLASA 507
+CF Q + S S DS + + + + +L+G GH ++C + + H++ S
Sbjct: 197 TCFSRDGQCTLIS-SLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCL-SERDTHVV-SC 253
Query: 508 SDDRTIRIWGL 518
S+D + W L
Sbjct: 254 SEDGKVFFWDL 264
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 227 (85.0 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 84/311 (27%), Positives = 141/311 (45%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P + ++ L V ++F+ +G Y + +D++ +W L G TL SGH
Sbjct: 12 ELPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN-PLRG--TLLRTYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V + S D+ L + G ++AV WDV+SG + + + G V+ ++ + I SG
Sbjct: 69 EVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKF-RGHAGKVNTVQFNEEATVILSG 127
Query: 337 ANDKSICMWELGGKELE-------CWKGQRTLKISDLEVTS---DGKQIITMCKESALLL 386
+ D SI W+ + E G ++K+SD EV S DG+ + L
Sbjct: 128 SIDSSIRCWDCRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGR-VRRYDLRMGQLF 186
Query: 387 LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRS 445
D Y+ T T FS RD + LV+ L+ + L + + GE L+ +Y GHK
Sbjct: 187 SD-------YVGSPITCTCFS--RDGQCTLVSSLDSTLRLLDKDTGE--LLGEYTGHKNQ 235
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLA 505
+ + C + + S SED +VY W L ALP G V ++++P P +L
Sbjct: 236 EYKLDCCLSERD-THVVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLLT 294
Query: 506 SASDDRTIRIW 516
+ ++ W
Sbjct: 295 AMGG--SVHCW 303
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/251 (22%), Positives = 113/251 (45%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V ++ D LTCG ++ ++ W+ G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G DK++ +W++ G+ + ++G K++ ++ + I++ +S++ D +
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAG-KVNTVQFNEEATVILSGSIDSSIRCWDCRS--- 140
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV---IR- 450
R E QT+ +RD V + + E+ +++G V+ G S +V I
Sbjct: 141 RRPEPVQTLDE---ARDG-ISSVKVSDHEVLSGSVDGRVRRYDLRMGQLFSDYVGSPITC 196
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA---VNCVSWNPANPHMLASA 507
+CF Q + S S DS + + + + +L+G GH ++C + + H++ S
Sbjct: 197 TCFSRDGQCTLVS-SLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCL-SERDTHVV-SC 253
Query: 508 SDDRTIRIWGL 518
S+D + W L
Sbjct: 254 SEDGKVYFWDL 264
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 236 (88.1 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 107/519 (20%), Positives = 215/519 (41%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A L+EE+ + L++ + F I GHWD L +
Sbjct: 5 IESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D++++ + EQ EL++ ++ A LR + +K ++
Sbjct: 65 SLKLPDKTLID-----LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+K + + +P RL L+ QAL Q+ +
Sbjct: 120 LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSV-VPPSRLMALLGQALKWQQHQGLL 178
Query: 199 HNSSDRDM--SLYTDHQCGRDQIPSRTLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSA 255
D+ ++ P++ + ++ G V +FS +G+YL + S D
Sbjct: 179 PPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFI 238
Query: 256 IIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+W G + LK++ + V C+ +S D + L T + ++ W + SG
Sbjct: 239 EVWNFT-TGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQ 297
Query: 310 CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLE 367
CL +E+A V+C + D I S + D++I + L GK L+ ++G + +++
Sbjct: 298 CLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSF-VNEAT 356
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEE-------DQTITSFSLSRDNK--FLLV 417
T DG II+ + + + + + + + D T+ S L N F++
Sbjct: 357 FTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVC 416
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N + + N++G++ V + KR C +I ED +Y + +
Sbjct: 417 NRSNTVV-IMNMQGQI--VRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVT 473
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + +++A+ S+D +++W
Sbjct: 474 GKLERTLTVHEKDVIGIAHHP-HQNLIATYSEDGLLKLW 511
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 236 (88.1 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 107/519 (20%), Positives = 215/519 (41%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A L+EE+ + L++ + F I GHWD L +
Sbjct: 5 IESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D++++ + EQ EL++ ++ A LR + +K ++
Sbjct: 65 SLKLPDKTLID-----LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+K + + +P RL L+ QAL Q+ +
Sbjct: 120 LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSV-VPPSRLMALLGQALKWQQHQGLL 178
Query: 199 HNSSDRDM--SLYTDHQCGRDQIPSRTLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSA 255
D+ ++ P++ + ++ G V +FS +G+YL + S D
Sbjct: 179 PPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFI 238
Query: 256 IIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+W G + LK++ + V C+ +S D + L T + ++ W + SG
Sbjct: 239 EVWNFT-TGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQ 297
Query: 310 CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLE 367
CL +E+A V+C + D I S + D++I + L GK L+ ++G + +++
Sbjct: 298 CLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSF-VNEAT 356
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEE-------DQTITSFSLSRDNK--FLLV 417
T DG II+ + + + + + + + D T+ S L N F++
Sbjct: 357 FTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVC 416
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N + + N++G++ V + KR C +I ED +Y + +
Sbjct: 417 NRSNTVV-IMNMQGQI--VRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVT 473
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + +++A+ S+D +++W
Sbjct: 474 GKLERTLTVHEKDVIGIAHHP-HQNLIATYSEDGLLKLW 511
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 236 (88.1 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 107/519 (20%), Positives = 215/519 (41%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A L+EE+ + L++ + F I GHWD L +
Sbjct: 5 IESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D++++ + EQ EL++ ++ A LR + +K ++
Sbjct: 65 SLKLPDKTLID-----LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+K + + +P RL L+ QAL Q+ +
Sbjct: 120 LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSV-VPPSRLMALLGQALKWQQHQGLL 178
Query: 199 HNSSDRDM--SLYTDHQCGRDQIPSRTLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSA 255
D+ ++ P++ + ++ G V +FS +G+YL + S D
Sbjct: 179 PPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFI 238
Query: 256 IIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+W G + LK++ + V C+ +S D + L T + ++ W + SG
Sbjct: 239 EVWNFT-TGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQ 297
Query: 310 CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLE 367
CL +E+A V+C + D I S + D++I + L GK L+ ++G + +++
Sbjct: 298 CLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSF-VNEAT 356
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEE-------DQTITSFSLSRDNK--FLLV 417
T DG II+ + + + + + + + D T+ S L N F++
Sbjct: 357 FTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVC 416
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N + + N++G++ V + KR C +I ED +Y + +
Sbjct: 417 NRSNTVV-IMNMQGQI--VRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVT 473
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + +++A+ S+D +++W
Sbjct: 474 GKLERTLTVHEKDVIGIAHHP-HQNLIATYSEDGLLKLW 511
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 236 (88.1 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 69/307 (22%), Positives = 134/307 (43%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+L+GH V ++FS + +AS D + +W L + GH +S +SWS
Sbjct: 171 LLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTG---KLIYTFEGHLAGISTISWS 227
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG--LVSCGWHPDRKWIFSGANDKSIC 343
D + + ++ +R W+V +G H G + + + P + SG+ D+++
Sbjct: 228 PDGATIASGSDDKTIRLWNVLTGKA-HPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQ 401
+W++ + + +S ++V DG I + + + + D + + ED
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 402 T-ITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQ- 458
++S S + K++L L+ + LW+ +EG + + Y+GH ++ + FG Q
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEG--RCLKTYQGHSNKKYSLSGAFGVYGQS 404
Query: 459 --------AFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCV-SWNPANPHMLASASD 509
AF SGSED + W + ++ + H G V V + + + S
Sbjct: 405 IPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGL 464
Query: 510 DRTIRIW 516
D T+R+W
Sbjct: 465 DGTVRVW 471
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 67/291 (23%), Positives = 120/291 (41%)
Query: 269 KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHP 328
K L GH + VS V +S D + + G + AV+ W S+G ++ +E G+ + W P
Sbjct: 169 KFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSP 228
Query: 329 DRKWIFSGANDKSICMWE-LGGKELEC-WKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D I SG++DK+I +W L GK + G + + + G +++ + A+ L
Sbjct: 229 DGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNY-VYAIAFSPKGNMLVSGSYDEAVFL 287
Query: 387 LD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHK 443
D R A+V + + ++ + D + + + +W+ G+ ++ +
Sbjct: 288 WDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNP 347
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS-------GAVNCVSW 496
V S G ++ + + D V +W + GHS GA
Sbjct: 348 PVSSVKFSPNG----KYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQ 403
Query: 497 N-PAN-P-HMLA-SASDDRTIRIWGLKDLNV-KRKDCHSN---GVHYCNGG 539
+ P P + A S S+D I W + V +R + H GV C+ G
Sbjct: 404 SIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTG 454
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 39/144 (27%), Positives = 65/144 (45%)
Query: 221 SRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVS 280
+R ++ L H+D V + +G +AS + D IW D + G L+ + PVS
Sbjct: 293 ARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIW--DTSTGQCLRTLVHEDNPPVS 350
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYE-----KAGL-------GLVSCGWHP 328
V +S + + +L +++ VR WD G CL Y+ K L G G P
Sbjct: 351 SVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTP 410
Query: 329 DRKWIFSGANDKSICMWELGGKEL 352
+ SG+ D +I W++ K++
Sbjct: 411 GYAFAVSGSEDGAILCWDVVTKKV 434
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 235 (87.8 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 68/280 (24%), Positives = 125/280 (44%)
Query: 242 NGKYL-ASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAV 300
+G YL AS S D + IW V L TL LSGH P++CV W + + + ++ +
Sbjct: 237 SGPYLLASGSKDNTVRIWNVKLR---TLLFTLSGHTAPITCVRWGGQNW-IYSSSYDKTI 292
Query: 301 RRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRT 360
R WD G CLH+ + + + + SGA D + + K + ++
Sbjct: 293 RIWDAKDGKCLHILKGHAARVNHLSLSTEHV-LRSGAYDHT----DFKPKSFSDER-RKA 346
Query: 361 LKISDLEVTSDGKQIITMCKESALLLLD--REAK-VERYIEEDQTITSFSLSRDNKFLLV 417
+ + + G+++++ + L+L D + K + + + + S S D + +
Sbjct: 347 KERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIAT 406
Query: 418 NLLNQEIHLWNIEGEV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRA 476
+ + LW +G+ K +A +GH + + C + + S S+D+ + +W
Sbjct: 407 ASFDSSVRLW--DGKTGKFLATLRGHVAA---VYQCAWSTDSRLLVSSSQDTTLKVWDVR 461
Query: 477 SCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
S + LPGH V V W+P + +AS D+ +RIW
Sbjct: 462 SKKMKFDLPGHEDQVFAVDWSP-DGQRVASGGADKAVRIW 500
Score = 212 (79.7 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 78/310 (25%), Positives = 133/310 (42%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS- 285
++GHT+ V + ++ + +A+ S D + W D G + L H KP+ + W
Sbjct: 173 MKGHTNWVSCVAWAPDASIIATGSMDNTIRFW--DPKKGSPIGDALRRHTKPIMALCWQP 230
Query: 286 ---SDDQ--QLLTCGVEE-AVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAND 339
+ D LL G ++ VR W+V L + W + WI+S + D
Sbjct: 231 LHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYD 289
Query: 340 KSICMWEL-GGKELECWKGQRT----LKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
K+I +W+ GK L KG L +S V G T K + R+AK E
Sbjct: 290 KTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAK-E 348
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
RY L + + L+ + ++ LW+ + K + K GH++ V+
Sbjct: 349 RY--------EACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQK---VVNHASF 397
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIR 514
+ IA+ S DS V +W + + L GH AV +W+ + +L S+S D T++
Sbjct: 398 SPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWS-TDSRLLVSSSQDTTLK 456
Query: 515 IWGLKDLNVK 524
+W ++ +K
Sbjct: 457 VWDVRSKKMK 466
Score = 136 (52.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 43/154 (27%), Positives = 71/154 (46%)
Query: 194 EACMFHNSSDRDMSLYTDHQC--GRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSN 251
EAC+ S +R +S D Q Q ++ + + GH V FS +G+ +A++S
Sbjct: 351 EACL-KQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Query: 252 DRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL 311
D S +W D G L L GH V +WS+D + L++ + ++ WDV S
Sbjct: 410 DSSVRLW--DGKTGKFLA-TLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMK 466
Query: 312 HVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
+ + W PD + + SG DK++ +W
Sbjct: 467 FDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 134 (52.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/187 (24%), Positives = 79/187 (42%)
Query: 176 IPERRLEHLVEQALVLQRE--ACMFHN----SSDRDMSLYTDHQCGRDQIPSRTLQILQG 229
+P H ++ + +Q +FHN + D LYT R + +R + G
Sbjct: 73 VPYNFALHHEDETIEIQDNLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNG 132
Query: 230 HTDEVWFLQFSHN-GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
H + QFS + L + S D +A +W+ D + + GH VSCV+W+ D
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIAT---MKGHTNWVSCVAWAPDA 189
Query: 289 QQLLTCGVEEAVRRWDVSSGN----CLHVYEKAGLGLVSCGWH--PDRK--WIFSGANDK 340
+ T ++ +R WD G+ L + K + L H PD + SG+ D
Sbjct: 190 SIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 341 SICMWEL 347
++ +W +
Sbjct: 250 TVRIWNV 256
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 400 DQTITS--FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE 457
D TI S FS S ++ L+ + LW+ + + +A KGH + +V SC
Sbjct: 134 DGTIISAQFSPSTSSR-LVTGSGDFTARLWDCDTQTP-IATMKGH--TNWV--SCVAWAP 187
Query: 458 QA-FIASGSEDSQVYIWHRASCDLIG-ALPGHSGAVNCVSWNP------ANPHMLASASD 509
A IA+GS D+ + W IG AL H+ + + W P + P++LAS S
Sbjct: 188 DASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSK 247
Query: 510 DRTIRIWGLK 519
D T+RIW +K
Sbjct: 248 DNTVRIWNVK 257
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 235 (87.8 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 107/519 (20%), Positives = 215/519 (41%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A L+EE+ + L++ + F I GHWD L +
Sbjct: 5 IESSDVIRLIMQYLKENSLHRALATLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D++++ + EQ EL++ ++ A LR + +K ++
Sbjct: 65 SLKLPDKTLID-----LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+K + + +P RL L+ QAL Q+ +
Sbjct: 120 LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSV-VPPSRLMALLGQALKWQQHQGLL 178
Query: 199 HNSSDRDM--SLYTDHQCGRDQIPSRTLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSA 255
D+ ++ P++ + ++ G V +FS +G+YL + S D
Sbjct: 179 PPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFI 238
Query: 256 IIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+W G + LK++ + V C+ +S D + L T + ++ W + SG
Sbjct: 239 EVWNFT-TGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQ 297
Query: 310 CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLE 367
CL +E+A V+C + D I S + D++I + L GK L+ ++G + +++
Sbjct: 298 CLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSF-VNEAT 356
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEE-------DQTITSFSLSRDNK--FLLV 417
T DG II+ + + + + + + + D T+ S L N F++
Sbjct: 357 FTQDGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVC 416
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N + + N++G++ V + KR C +I ED +Y + +
Sbjct: 417 NRSNTVV-IMNMQGQI--VRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVT 473
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + +++A+ S+D +++W
Sbjct: 474 GKLERTLTVHEKDVIGIAHHP-HQNLIATYSEDGLLKLW 511
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 223 (83.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 79/310 (25%), Positives = 142/310 (45%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P + L+ L V ++F+ +G Y + +D++ +W L G TL SGH
Sbjct: 12 ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN-PLRG--TLLRTYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V + S D+ L + G ++AV WDV+SG + + + G V+ ++ + I SG
Sbjct: 69 EVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKF-RGHAGKVNTVQFNEEATVILSG 127
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERY 396
+ D +I W+ C + ++ + L+ DG + + + +L + +V RY
Sbjct: 128 SIDSTIRCWD-------C-RSRKPEPVQTLDEARDGISSVKV-SDHEVLAGSVDGRVRRY 178
Query: 397 ------IEEDQT---ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSR 446
+ D IT SRD + LV+ L+ + L + + GE L+ +Y GHK
Sbjct: 179 DLRMGQLFSDYVGSPITCICFSRDGQCTLVSSLDSTLRLLDKDTGE--LLGEYTGHKNKE 236
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLAS 506
+ + C + + S SED +V+ W L ALP G V ++++P P +L +
Sbjct: 237 YKLDCCLSERD-THVVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLLTA 295
Query: 507 ASDDRTIRIW 516
+I+ W
Sbjct: 296 MGG--SIQCW 303
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 57/251 (22%), Positives = 111/251 (44%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V ++ D LTCG ++ ++ W+ G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G DK++ +W++ G+ + ++G K++ ++ + I++ +S + D +
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAG-KVNTVQFNEEATVILSGSIDSTIRCWDCRS--- 140
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV---IRS 451
R E QT+ +RD V + + E+ +++G V+ G S +V I
Sbjct: 141 RKPEPVQTLDE---ARDG-ISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSPITC 196
Query: 452 -CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA---VNCVSWNPANPHMLASA 507
CF Q + S S DS + + + + +L+G GH ++C + + H++ S
Sbjct: 197 ICFSRDGQCTLVS-SLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCL-SERDTHVV-SC 253
Query: 508 SDDRTIRIWGL 518
S+D + W L
Sbjct: 254 SEDGKVFFWDL 264
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 234 (87.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 73/307 (23%), Positives = 137/307 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSH-NGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
IP + + +GHT + L+F +G L S S D IWEV + +L GH +
Sbjct: 254 IPKKHIFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDR--SLLRTFQGHAR 311
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL-GLVSCGWHPDRKWIF-S 335
P+ +S+S D + L+ ++ ++ WD G CL+ + L V PD+ F +
Sbjct: 312 PIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLA 371
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVER 395
G DK I +++ ++ I+ + +GK+ +T +S++ + V
Sbjct: 372 GTADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPI 431
Query: 396 YIEEDQTITSF---SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
D + S +L + K + L+ I++++ + + K +KG+ S + +
Sbjct: 432 KFVADIAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLE 491
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD- 509
F + F+ SG W +C L+ LP HSG V ++++P +A++S
Sbjct: 492 VGFSP-DGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIV 550
Query: 510 DRTIRIW 516
D +I+ W
Sbjct: 551 DGSIKYW 557
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 221 (82.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 78/305 (25%), Positives = 145/305 (47%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P + L+ L V ++F+ +G Y + +D++ +W L G TL SGH
Sbjct: 12 ELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWN-PLRG--TLLRTYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V + S D+ L + G ++AV WDV+SG + + + G V+ ++ + I SG
Sbjct: 69 EVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKF-RGHAGKVNTVQFNEEATVILSG 127
Query: 337 ANDKSICMWELGGKELECWKGQRTLK--ISDLEVTSDGKQIITMCKESALLLLD-REAKV 393
+ D S+ W+ ++ E + + IS ++V SD +++ + + D R ++
Sbjct: 128 SIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV-SD-HEVLAGSVDGRVRRYDLRMGQL 185
Query: 394 -ERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
Y+ T T FS RD + LV+ L+ + L + + GE L+ +Y GHK + +
Sbjct: 186 FSDYVGSPITCTCFS--RDGQCTLVSSLDSTLRLLDKDTGE--LLGEYTGHKNQEYKLDC 241
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
C + + S SED +V+ W L+ ALP V ++++P P +L +
Sbjct: 242 CLSERD-THVVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLTAMGG-- 298
Query: 512 TIRIW 516
+++ W
Sbjct: 299 SVQCW 303
Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 57/251 (22%), Positives = 113/251 (45%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V ++ D LTCG ++ ++ W+ G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G DK++ +W++ G+ + ++G K++ ++ + I++ +S++ D +
Sbjct: 85 GGGDKAVVLWDVASGQVVRKFRGHAG-KVNTVQFNEEATVILSGSIDSSVRCWDCRS--- 140
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV---IR- 450
R E QT+ +RD V + + E+ +++G V+ G S +V I
Sbjct: 141 RKPEPVQTLDE---ARDG-ISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSPITC 196
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA---VNCVSWNPANPHMLASA 507
+CF Q + S S DS + + + + +L+G GH ++C + + H++ S
Sbjct: 197 TCFSRDGQCTLVS-SLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCL-SERDTHVV-SC 253
Query: 508 SDDRTIRIWGL 518
S+D + W L
Sbjct: 254 SEDGKVFFWDL 264
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 220 (82.5 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 78/305 (25%), Positives = 145/305 (47%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P + ++ L V ++F+ +G Y + +D++ +W L G TL SGH
Sbjct: 12 ELPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWN-PLRG--TLLRTYSGHGY 68
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
V + S D+ L + G ++ V WDV++G + + + G V+ ++ + I SG
Sbjct: 69 EVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKF-RGHAGKVNTVQFNEEATVILSG 127
Query: 337 ANDKSICMWELGGKELECWKGQRTLK--ISDLEVTSDGKQIITMCKESALLLLD-REAKV 393
+ D S+ W+ ++ E + + IS ++V SD +I+ + + D R +V
Sbjct: 128 SIDSSVRCWDCRSRKPEPVQTLDEARDGISSVKV-SD-HEILAGSVDGRVRRYDLRMGQV 185
Query: 394 ER-YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
Y+ T T FS RD + L++ L+ + L + + GE L+ +Y GHK ++ +
Sbjct: 186 SSDYVGSPITCTCFS--RDGQCTLISSLDSTLRLLDKDTGE--LLGEYVGHKNQQYKLDC 241
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
C + + S SED +V+ W L ALP S V ++++P P +L +
Sbjct: 242 CLSERD-THVVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLTAMGG-- 298
Query: 512 TIRIW 516
+I+ W
Sbjct: 299 SIQYW 303
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 58/251 (23%), Positives = 113/251 (45%)
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS 335
Q V V ++ D LTCG ++ ++ W+ G L Y G ++ D + S
Sbjct: 25 QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCS 84
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G DK++ +W++ G+ + ++G K++ ++ + I++ +S++ D +
Sbjct: 85 GGGDKTVVLWDVATGQVVRKFRGHAG-KVNTVQFNEEATVILSGSIDSSVRCWDCRS--- 140
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV---IR- 450
R E QT+ +RD V + + EI +++G V+ G S +V I
Sbjct: 141 RKPEPVQTLDE---ARDG-ISSVKVSDHEILAGSVDGRVRRYDLRMGQVSSDYVGSPITC 196
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA---VNCVSWNPANPHMLASA 507
+CF Q + S S DS + + + + +L+G GH ++C + + H++ S
Sbjct: 197 TCFSRDGQCTLIS-SLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCL-SERDTHVV-SC 253
Query: 508 SDDRTIRIWGL 518
S+D + W L
Sbjct: 254 SEDGKVFFWDL 264
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 229 (85.7 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 106/519 (20%), Positives = 213/519 (41%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A EE+ + L++ + F I GHWD L +
Sbjct: 5 IESSDVIRLIMQYLKENSLHRALATFTEETTVSLNTVDSIESFVADINSGHWDTVLQAIQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D++++ + EQ EL++ ++ A LR + +K ++
Sbjct: 65 SLKLPDKTLID-----LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+K + + +P RL L+ QAL Q+ +
Sbjct: 120 LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSV-VPPSRLMALLGQALKWQQHQGLL 178
Query: 199 HNSSDRDM--SLYTDHQCGRDQIPSRTLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSA 255
D+ ++ P++ + ++ G V +FS +G+YL + S D
Sbjct: 179 PPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFI 238
Query: 256 IIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+W G + LK++ + V C+ +S D + L T + ++ W + SG
Sbjct: 239 EVWNFT-TGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQ 297
Query: 310 CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLE 367
CL +E+A V+C + D I S + D++I + L GK L+ ++G + +++
Sbjct: 298 CLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTLKEFRGHSSF-VNEAT 356
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEE-------DQTITSFSLSRDNK--FLLV 417
T DG II+ + + + + + + + D T+ S L N F++
Sbjct: 357 FTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVC 416
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N + + N++G++ V + KR C +I ED +Y + +
Sbjct: 417 NRSNTVV-IMNMQGQI--VRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVT 473
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + +++A+ S+D +++W
Sbjct: 474 GKLERTLTVHEKDVIGIAHHP-HQNLIATYSEDGLLKLW 511
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 229 (85.7 bits), Expect = 4.8e-16, P = 4.8e-16
Identities = 105/519 (20%), Positives = 214/519 (41%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A L+EE+ + L++ + F I GHWD L +
Sbjct: 5 IESADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVLQAIQ 64
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKNSRVRELXXXXX 138
+ L D++++ + EQ EL++ ++ A LR + +K ++
Sbjct: 65 SLKLPDKTLID-----LYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLEN 119
Query: 139 XXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMF 198
+K + + +P RL L+ Q+L Q+ +
Sbjct: 120 LLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSV-VPPSRLMALLGQSLKWQQHQGLL 178
Query: 199 HNSSDRDM--SLYTDHQCGRDQIPSRTLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSA 255
D+ ++ P++ + ++ G V +FS +G+YL + S D
Sbjct: 179 PPGMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFI 238
Query: 256 IIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+W G + LK++ + V C+S+S D + L T + ++ W + SG
Sbjct: 239 EVWNFT-TGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQ 297
Query: 310 CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLE 367
CL YE+A V+C + D I S + D++I + L GK L+ ++G + +++
Sbjct: 298 CLRRYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSF-VNEAT 356
Query: 368 VTSDGKQIITMCKESALLLLDREA--------KVERYIEEDQTITSFSLSRDNK--FLLV 417
+T DG I+ + + + + + + D T+ + L N F++
Sbjct: 357 LTPDGHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVC 416
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N + + N++G++ V + KR C +I ED +Y + +
Sbjct: 417 NRSNTVV-IMNMQGQI--VRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVT 473
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L L H V ++ +P + +++ + S+D +++W
Sbjct: 474 GKLERTLTVHEKDVIGIAHHP-HQNLIGTYSEDGLLKLW 511
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 230 (86.0 bits), Expect = 5.3e-16, P = 5.3e-16
Identities = 64/307 (20%), Positives = 131/307 (42%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + GHT V +++ G L S+ D + IW D G GH +
Sbjct: 292 VPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIW--DAYGDRRCIQTYMGHSQ 349
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD---RKWIF 334
V + +S+D ++ L+CG + R WD +G L + + ++PD ++
Sbjct: 350 AVRDICFSNDGRRFLSCGYDRQTRLWDTETGKILSSFTNGKIPYC-IKFNPDDDKQEQFL 408
Query: 335 SGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
G +DK I W++ ++ Q ++ + D ++ +T + +L + D V
Sbjct: 409 CGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSLRVWDWGIPVV 468
Query: 395 -RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVI 449
+YI + ++ + +L K+ L+ +I +++ ++ K + GH S +
Sbjct: 469 IKYISDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGHNVSGYAC 528
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD 509
+ F + FI SG + + W + +I + H+ + W P P +A+ S
Sbjct: 529 QLGFSP-DGKFIYSGDSTGKAFFWDWKTSKIIKTINAHNNVCIGIEWAPLEPSKVATCSW 587
Query: 510 DRTIRIW 516
+ I++W
Sbjct: 588 NNEIKLW 594
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 233 (87.1 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 83/353 (23%), Positives = 159/353 (45%)
Query: 186 EQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKY 245
E + V Q+ D M LY + + I + + +++ HTD V+ FS +G+
Sbjct: 573 ETSEVYQQAKLQAKQEVDHGM-LYLEW-INKKNIKNLSRLVVRPHTDAVYHACFSEDGQR 630
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
+AS D++ +++ + G L+ K H+ V C ++S+DD+ + TC V++ V+ W+
Sbjct: 631 IASCGVDKTLQVFKAE-TGEKLLEIK--AHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 687
Query: 306 SSGNCLHVYEKAGLGLVSCGWHPDRKWIF--SGANDKSICMWELGGKELECWKGQRTLKI 363
+G +HVY++ + C + + ++ + ++D + +W+L KE T +
Sbjct: 688 MTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 747
Query: 364 SDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQ 422
+ + D K + + + L L D + A + I Q + +++ ++V +
Sbjct: 748 NHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCS- 806
Query: 423 EIHLWNIEG-EVKLVAKYK--------G------HKRSRFVIRSC-FGGLEQAFIASGSE 466
W+ +G + + AK K G H I+ C F + + S+
Sbjct: 807 ----WSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQ 862
Query: 467 DSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
V +W+ SC + GH V+CV ++P L S SDD+TIR+W K
Sbjct: 863 CC-VELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTS-SDDQTIRLWETK 913
Score = 166 (63.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 66/303 (21%), Positives = 132/303 (43%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G +SS+D++ +WE V N + LK ++ V +
Sbjct: 880 RGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEID--------VVF 931
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + ++R + +G + + C P ++I G D ++ +
Sbjct: 932 QENEVMVLAV---DNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEI 988
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-T 402
EL + + G + + ++ T DGK +I+ +S++ + + +++ +++ Q T
Sbjct: 989 LELLNNRIFQSRIGHKKT-VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQET 1047
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV-----IRSCFGGLE 457
+ F L +++K L W+ +G VK+ + G FV + SC +
Sbjct: 1048 VKDFKLLKNSKLLS----------WSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPD 1097
Query: 458 QAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWG 517
+S S D IW + L GH G V C ++ + +LA+ D+ IRIW
Sbjct: 1098 ATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLLATGDDNGEIRIWN 1156
Query: 518 LKD 520
+ +
Sbjct: 1157 VSN 1159
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 233 (87.1 bits), Expect = 8.2e-16, P = 8.2e-16
Identities = 83/353 (23%), Positives = 159/353 (45%)
Query: 186 EQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKY 245
E + V Q+ D M LY + + I + + +++ HTD V+ FS +G+
Sbjct: 580 ETSEVYQQAKLQAKQEVDHGM-LYLEW-INKKNIKNLSRLVVRPHTDAVYHACFSEDGQR 637
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
+AS D++ +++ + G L+ K H+ V C ++S+DD+ + TC V++ V+ W+
Sbjct: 638 IASCGVDKTLQVFKAE-TGEKLLEIK--AHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 694
Query: 306 SSGNCLHVYEKAGLGLVSCGWHPDRKWIF--SGANDKSICMWELGGKELECWKGQRTLKI 363
+G +HVY++ + C + + ++ + ++D + +W+L KE T +
Sbjct: 695 MTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 754
Query: 364 SDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQ 422
+ + D K + + + L L D + A + I Q + +++ ++V +
Sbjct: 755 NHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCS- 813
Query: 423 EIHLWNIEG-EVKLVAKYK--------G------HKRSRFVIRSC-FGGLEQAFIASGSE 466
W+ +G + + AK K G H I+ C F + + S+
Sbjct: 814 ----WSADGTRIMVAAKNKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQ 869
Query: 467 DSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
V +W+ SC + GH V+CV ++P L S SDD+TIR+W K
Sbjct: 870 CC-VELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTS-SDDQTIRLWETK 920
Score = 161 (61.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 63/299 (21%), Positives = 133/299 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G +SS+D++ +WE V N + LK ++ V +
Sbjct: 887 RGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEID--------VVF 938
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + ++R + +G + + C P ++I G D ++ +
Sbjct: 939 QENEVMVLAV---DNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEI 995
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-T 402
EL + + G + + ++ T DGK +I+ +S++ + + +++ +++ Q T
Sbjct: 996 LELLNNRIFQSRIGHKKT-VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQET 1054
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ F L +++K L + +W+I G ++ + H+ + + SC +
Sbjct: 1055 VKDFKLLKNSKLLSWSFDGTVKKIWSIITGRIE--KDFVCHQDT---VLSCDISPDATKF 1109
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+S S D IW + L GH G V C ++ + +LA+ D+ IRIW + +
Sbjct: 1110 SSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLLATGDDNGEIRIWNVSN 1167
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 225 (84.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 80/307 (26%), Positives = 140/307 (45%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L L+GHT V + +S NG +A+ S D + IW D G L L GH K ++ ++
Sbjct: 184 LHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIW--DAKKGQALGAPLKGHVKWITSLA 241
Query: 284 WS------SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSG 336
W S +L + + VR WDV S + G V+C W K I++
Sbjct: 242 WEPYHLQQSGHPRLASASKDSTVRIWDVISKRA-DIVLSGHKGSVTCVRWGGTGK-IYTS 299
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL---LDREAKV 393
++D++I +W L +++ L +++D + + D+ A
Sbjct: 300 SHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMA 359
Query: 394 ERYIEEDQTITSFSLSRDNKFLLVNLLNQ-EIHLWNIEGEVKLVAKYKGHKRSRFVIRSC 452
++ E+ TI + + + LV+ + ++LW+ E K VA+ GH++ V
Sbjct: 360 KKRFEKAATINNKIVEK-----LVSASDDFTMYLWDPESSSKPVARLLGHQKE--VNHVT 412
Query: 453 FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
F + A+IAS D+ V +W+ I L GH GAV ++ A+ +L S+S D T
Sbjct: 413 FSP-DMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFS-ADSRLLVSSSKDTT 470
Query: 513 IRIWGLK 519
+++W ++
Sbjct: 471 LKVWNVR 477
Score = 186 (70.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 80/350 (22%), Positives = 143/350 (40%)
Query: 201 SSDRDMSLY-TDHQCGRDQIPSRTLQILQGHTDEVWFLQFSH-NGKYLASSSNDRSAIIW 258
+++ + LY T R + SR + GH + + FS + + S S D +A IW
Sbjct: 117 TTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIW 176
Query: 259 EVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG 318
+ D G L H L GH V VS+S + + T ++ VR WD G L K
Sbjct: 177 DCDT--GTPL-HTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGH 233
Query: 319 LG-LVSCGWHP------DRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSD 371
+ + S W P + S + D ++ +W++ K + ++ +
Sbjct: 234 VKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGT 293
Query: 372 GKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
GK I T + + + + + ++ + +LS D F+L + H +
Sbjct: 294 GK-IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTD--FILRTAYHD--HTGKV 348
Query: 430 -EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWH-RASCDLIGALPGH 487
E + VA K I + +E+ + S S+D +Y+W +S + L GH
Sbjct: 349 PESDADKVAMAKKRFEKAATINNKI--VEK--LVSASDDFTMYLWDPESSSKPVARLLGH 404
Query: 488 SGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVHYC 536
VN V+++P + +ASA D +++W +D + H V+ C
Sbjct: 405 QKEVNHVTFSPDMAY-IASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQC 453
Score = 180 (68.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 66/288 (22%), Positives = 128/288 (44%)
Query: 233 EVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLL 292
E + LQ S + + LAS+S D + IW+V ++ + LSGH+ V+CV W + +
Sbjct: 243 EPYHLQQSGHPR-LASASKDSTVRIWDV-ISKRADIV--LSGHKGSVTCVRWGGTGK-IY 297
Query: 293 TCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA-NDKSICMWELGGKE 351
T + ++ W+ +G + + D +I A +D + + E +
Sbjct: 298 TSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTD--FILRTAYHDHTGKVPESDADK 355
Query: 352 LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK---VERYIEEDQTITSFSL 408
+ K +R K + + +++++ + + L D E+ V R + + + +
Sbjct: 356 VAMAK-KRFEKAATIN-NKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTF 413
Query: 409 SRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDS 468
S D ++ + + LWN + K + +GH + V + CF + + S S+D+
Sbjct: 414 SPDMAYIASAGFDNHVKLWNGR-DGKFITTLRGHVGA--VYQCCFSA-DSRLLVSSSKDT 469
Query: 469 QVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ +W+ + L LPGH V V W+P + + S D+ IRIW
Sbjct: 470 TLKVWNVRTGKLSEDLPGHKDEVFAVDWSP-DGQKVGSGGKDKAIRIW 516
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 217 (81.4 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 80/300 (26%), Positives = 140/300 (46%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
++ H EV+ + FS +GKY+ASSS D + ++ V N T+ L GH+ V W
Sbjct: 32 LINSHKGEVYSINFSSDGKYIASSSFDMTIMVHNV-YNECETIG-VLRGHKNAVLQAKWL 89
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIF-SGANDKSICM 344
DD + + + + WDV + L + K +V+ G +F S ++D ++
Sbjct: 90 QDDNYICSASADHKLFLWDVECESKLRSF-KGHDNIVN-GLDIINHNLFVSCSDDNTLKF 147
Query: 345 WELGGKELECWKGQRTLK--ISDLEVTSD--GKQIITMCKESALLLLD-REAKV-ERYIE 398
W++ K W +K L V SD G+ + T C ++ + D + K+ + +I
Sbjct: 148 WDIRSK----W-AVHIIKHDFPLLSVCSDKKGEFLFTSCVDNTIKKYDCKNYKLKDTFIG 202
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG---EVKLVAKYKGHKRS--RFVIRSCF 453
IT +++D L ++ I W+I+ E KL+ + K + +I+ F
Sbjct: 203 HKDYITGLDINKDETMLASISADESICFWDIQPFSCEEKLLFQLNSPKYNIDYNLIKLSF 262
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+A GS D+ +YI+ L +LPGH+ +N V+++P ++AS S D TI
Sbjct: 263 NN--DNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVED-IVASCSSDHTI 319
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 28/118 (23%), Positives = 61/118 (51%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
+ S + S D K++ + + I + N+ E + + +GHK + V+++ + + +I
Sbjct: 40 VYSINFSSDGKYIASSSFDMTIMVHNVYNECETIGVLRGHKNA--VLQAKWLQ-DDNYIC 96
Query: 463 SGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
S S D ++++W C+ + + GH VN + + N ++ S SDD T++ W ++
Sbjct: 97 SASADHKLFLWD-VECESKLRSFKGHDNIVNGL--DIINHNLFVSCSDDNTLKFWDIR 151
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 212 (79.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 65/249 (26%), Positives = 120/249 (48%)
Query: 275 HQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLV-SCGWHPDRKW 332
H V+C ++S D + LLT + V W SG L + AG G V SC + PD +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLL--WRLAGHRGPVKSCCFSPDGRL 82
Query: 333 IFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA 391
I S ++D SI +W++ K L KG + + + + D KQ+ + + ++ + ++
Sbjct: 83 IASSSSDHSIRLWDVARSKCLHVLKGHQR-SVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 392 --KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY--KGHKRSRF 447
+V + +I S S + L + +H+W++ +V+ + +GH +
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNIS 201
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
+ C+ +ASGS D + +W + +L L GH+ VN ++++P + LASA
Sbjct: 202 CL--CYSA--SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP-DELKLASA 256
Query: 508 SDDRTIRIW 516
RT+++W
Sbjct: 257 GYSRTVKVW 265
Score = 176 (67.0 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 69/288 (23%), Positives = 122/288 (42%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
H EV FS +G+ L ++S+D +W +G L +L+GH+ PV +S D +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTK-SG--RLLWRLAGHRGPVKSCCFSPDGR 81
Query: 290 QLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-G 348
+ + + ++R WDV+ CLHV + + + + PD K + SG DK +WE+
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQS 141
Query: 349 GKELECWKGQ-RTLKISDLEVTSDGKQIITMCKESALLLLDREAK---VERYIEEDQTIT 404
G+ + G +++ SD TSD + T +S + + D A V + E T
Sbjct: 142 GRRVHLLVGHCDSIQSSDFSPTSDS--LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGN 199
Query: 405 SFSLSRDNKFLLVN-LLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIAS 463
L LL + ++ I +W L + KGH + S ++ +AS
Sbjct: 200 ISCLCYSASGLLASGSWDKTICVWKPTTN-NLPLQLKGHT---IWVNSLAFSPDELKLAS 255
Query: 464 GSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
V +W + + L G + + P +++ A+ R
Sbjct: 256 AGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGAAVTR 303
Score = 164 (62.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 50/181 (27%), Positives = 78/181 (43%)
Query: 194 EACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSND 252
++C F S +DH D S+ L +L+GH V + FS + K LAS D
Sbjct: 72 KSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWD 131
Query: 253 RSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLH 312
+ AI+WEV V H L GH + +S L T + V WD+ + +
Sbjct: 132 KRAIVWEVQSGRRV---HLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVV 188
Query: 313 VYE--KAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS 370
Y + G +SC + + SG+ DK+IC+W+ L T+ ++ L +
Sbjct: 189 SYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSP 248
Query: 371 D 371
D
Sbjct: 249 D 249
Score = 161 (61.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 41/126 (32%), Positives = 67/126 (53%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R L L GH V FS +G+ +ASSS+D S +W+V + + H L GHQ+ V
Sbjct: 59 RLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCL---HVLKGHQRSVET 115
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
VS+S D +QL + G ++ W+V SG +H+ + S + P + +G+ D +
Sbjct: 116 VSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDST 175
Query: 342 ICMWEL 347
+ +W+L
Sbjct: 176 VHIWDL 181
Score = 143 (55.4 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 42/158 (26%), Positives = 75/158 (47%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R + +L GH D + FS LA+ S D + IW++ + V H L GH +SC
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISC 202
Query: 282 VSWSSDDQQLLTCGV-EEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+ +S+ LL G ++ + W ++ N + + + S + PD + S +
Sbjct: 203 LCYSASG--LLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSR 260
Query: 341 SICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIIT 377
++ +W+ L GK LE KG + + + T DGK +++
Sbjct: 261 TVKVWDCLTGKCLETLKGMLDVAHACI-FTPDGKLLVS 297
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 36/165 (21%), Positives = 73/165 (44%)
Query: 357 GQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKF 414
GQ +++ + DG+ ++T + + + ++ + R + S S D +
Sbjct: 23 GQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRL 82
Query: 415 LLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWH 474
+ + + I LW++ K + KGH+RS + + + +ASG D + +W
Sbjct: 83 IASSSSDHSIRLWDV-ARSKCLHVLKGHQRS---VETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 475 RASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
S + L GH ++ ++P + LA+ S D T+ IW L+
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDS-LATGSWDSTVHIWDLR 182
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 219 (82.2 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 76/300 (25%), Positives = 136/300 (45%)
Query: 229 GHTDEVWFLQFSHNGKYL-ASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
GH E++ L S L A+ D A +W++ NG + L GH+ VSC+++S D
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIG-NGDWAAE--LPGHKDSVSCLAFSYD 124
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
Q L + G++ V+ +D SSG V + G G+ WHP + +G+ D S+ MW
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN- 183
Query: 348 GGKE--LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEED----- 400
KE L + G L ++ + T DGK I T +++L++ + + +I +
Sbjct: 184 ADKEAYLNMFSGHN-LNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHT 242
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ +T ++ ++ + + +H+ NI K+V+ H S ++
Sbjct: 243 EGLTCLDINSNSSLAISGSKDGSVHIVNIVTG-KVVSSLNSHTDSVECVKFSPSSATIPL 301
Query: 461 IASGSEDSQVYIWHRASCDLIGALPG----HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
A+G D ++ IW DL + P H V ++W + + LA+ + T+ IW
Sbjct: 302 AATGGMDKKLIIW-----DLQHSTPRFICEHEEGVTSLTWIGTSKY-LATGCANGTVSIW 355
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 71/300 (23%), Positives = 133/300 (44%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GH D V L FS++G+ LAS D ++ D + G TLK L G + V W
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLD--GVVQIFDASSG-TLKCVLDGPGAGIEWVRWHP 165
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMW 345
+L + ++ W+ L+++ L V+CG + PD K I +G++D S+ +W
Sbjct: 166 RGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLN-VTCGDFTPDGKLICTGSDDASLIVW 224
Query: 346 ELGGKE-LECWKGQ--RTLKISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYIEE-- 399
E + KG T ++ L++ S+ I+ K+ ++ +++ KV +
Sbjct: 225 NPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHT 284
Query: 400 DQT-ITSFSLSRDN-KFLLVNLLNQEIHLWNIEGEV-KLVAKYKGHKRSRFVIRSCFGGL 456
D FS S +++++ +W+++ + + + H+ V + G
Sbjct: 285 DSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE---HEEG--VTSLTWIGT 339
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ ++A+G + V IW + + GH AV +S + N + S S D T R++
Sbjct: 340 SK-YLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVS-TNTDFIVSVSVDNTARVF 397
Score = 140 (54.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 59/273 (21%), Positives = 121/273 (44%)
Query: 270 HKLSGHQKPVSCVSWSSDDQQLL-TCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC-GW 326
H +GH+ + ++ S D L+ T G ++ W + +G+ E G VSC +
Sbjct: 64 HTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDW--AAELPGHKDSVSCLAF 121
Query: 327 HPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
D + + SG D + +++ L+C I + G ++ ++ +L +
Sbjct: 122 SYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWM 181
Query: 387 --LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR 444
D+EA + + + +T + D K + + + +WN + + + KGH
Sbjct: 182 WNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPK-TCESIHIVKGHPY 240
Query: 445 SRFVIRSCFGGLEQAFIA-SGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH- 502
+ +C + +A SGS+D V+I + + ++ +L H+ +V CV ++P++
Sbjct: 241 HTEGL-TCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATI 299
Query: 503 -MLASASDDRTIRIWGLKDLNVKRKDC-HSNGV 533
+ A+ D+ + IW L+ + R C H GV
Sbjct: 300 PLAATGGMDKKLIIWDLQH-STPRFICEHEEGV 331
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 217 (81.4 bits), Expect = 5.8e-15, P = 5.8e-15
Identities = 73/326 (22%), Positives = 144/326 (44%)
Query: 216 RDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGH 275
+D+ + LQ H + + F+ +G + S DR+ IW D G L H L GH
Sbjct: 77 KDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIW--DTASGEEL-HTLEGH 133
Query: 276 QKPVSCVSWSSD-DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIF 334
+ V +++++ ++ T ++ + W +G C + + +V ++P +
Sbjct: 134 RNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVA 193
Query: 335 SGANDKSICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-- 391
+G+ D + +W++ G+E+ G +I L + G +++T + +L D +
Sbjct: 194 TGSMDTTAKLWDVESGEEVSTLAGHFA-EIISLCFNTTGDRLVTGSFDHTAILWDVPSGR 252
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRS 451
KV I+ + D + L++ +W+ EG + +A GH V+
Sbjct: 253 KVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG-QCLATLLGHNDE--VLDV 309
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
CF Q IA+ S D ++ + + L GH G ++ V +N +L +AS D+
Sbjct: 310 CFNYTGQ-LIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVL-TASVDK 367
Query: 512 TIRIWGLKD-LNVKRKDCHSNGVHYC 536
T R+W +K ++ + HS+ + C
Sbjct: 368 TSRVWCVKTGACLQVLEGHSDEIFSC 393
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 64/336 (19%), Positives = 141/336 (41%)
Query: 187 QALVLQREACMFHNSSDRDMSLYTDHQCGR-DQIPSRTLQILQGHTDEVWFLQFSHN-GK 244
QA +L F+ S ++ D C D L L+GH + V+ + F++ G
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGD 148
Query: 245 YLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWD 304
+A+ S D++ +W + G + GH + C++++ + T ++ + WD
Sbjct: 149 KVATGSFDKTCKLWSAET--GKCF-YTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 305 VSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKI 363
V SG + ++S ++ + +G+ D + +W++ G+++ G R +I
Sbjct: 206 VESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRG-EI 264
Query: 364 SDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLN 421
S ++ D I T + + + D E + + + + + + + +
Sbjct: 265 SCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASAD 324
Query: 422 QEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL-EQAFIASGSEDSQVYIWHRASCDL 480
+++ + + + + +GHK + + CF + AS + S+V+ +C
Sbjct: 325 GTSRVFSTD-TFQCLCQLEGHKGE--ISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC-- 379
Query: 481 IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ L GHS + ++N ++ + S D T RIW
Sbjct: 380 LQVLEGHSDEIFSCAFNYEGDTII-TGSKDNTCRIW 414
Score = 158 (60.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 61/253 (24%), Positives = 110/253 (43%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GHT E+ L F+ +A+ S D +A +W+V+ V+ L+GH + + +++
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVST---LAGHFAEIISLCFNTT 230
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC---GWHPDRKWIFSGANDKSICM 344
+L+T + WDV SG +HV G +SC W D I + + DKS +
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLS-GHRGEISCVQFNW--DCSLIATASLDKSCKV 287
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIEEDQ- 401
W+ GG+ L G ++ D+ G+ I T + + + + +E +
Sbjct: 288 WDAEGGQCLATLLGHND-EVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKG 346
Query: 402 TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
I+ + +L +++ +W ++ L +GH F SC E I
Sbjct: 347 EISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQV-LEGHSDEIF---SCAFNYEGDTI 402
Query: 462 ASGSEDSQVYIWH 474
+GS+D+ IWH
Sbjct: 403 ITGSKDNTCRIWH 415
Score = 145 (56.1 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 62/285 (21%), Positives = 118/285 (41%)
Query: 236 FLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCG 295
FL + G+ L + D + E D+ + L+ + + SCV + +LL C
Sbjct: 16 FLDYEKGGQ-LRTKCIDLLNLTPETDVEE-LVLEIRAAEPLITSSCV----EQVKLLICK 69
Query: 296 VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELEC 354
++E V + D + L L + ++ +G+ D++ +W+ G+EL
Sbjct: 70 LQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHT 129
Query: 355 WKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQT--ITSFSLSRDN 412
+G R + + G ++ T + L E Y T I + + +
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQS 189
Query: 413 KFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVY 471
+ ++ LW++E GE V+ GH +I CF + +GS D
Sbjct: 190 TLVATGSMDTTAKLWDVESGEE--VSTLAGHFAE--IISLCFNTTGDRLV-TGSFDHTAI 244
Query: 472 IWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+W S + L GH G ++CV +N + ++A+AS D++ ++W
Sbjct: 245 LWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVW 288
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 225 (84.3 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 79/334 (23%), Positives = 152/334 (45%)
Query: 203 DRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
D M LY + + I + + +++ HTD V+ FS +G+ +AS D++ +++ +
Sbjct: 589 DNGM-LYLEW-INKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAE- 645
Query: 263 NGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLV 322
G L+ K H+ V C ++S+DD+ + TC V++ V+ W+ +G + Y++ +
Sbjct: 646 TGEKLLEIK--AHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVN 703
Query: 323 SCGW--HPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCK 380
C + + + + +G++D + +W+L KE T +S + D K + +
Sbjct: 704 CCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSA 763
Query: 381 ESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLN-------------QEIHL 426
+ L L D + A + I Q + S+++ ++V + ++ L
Sbjct: 764 DGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWSADGASLVVAAKNKVLL 823
Query: 427 WNIEGEVKLVAKYKGHKRSRFVIRSC-FGGLEQAFIASGSEDSQVYIWHRASCDLIGALP 485
+NI L + GH + I+ C F + + S+ V +W+ SC +
Sbjct: 824 FNIHTGGLLAEIHTGHHST---IQYCDFSPSNHLAVVALSQYC-VELWNMDSCLKVADCR 879
Query: 486 GHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
GH V+C ++P L S SDD TIR+W K
Sbjct: 880 GHLSWVHCAMFSPDGSSFLTS-SDDETIRLWETK 912
Score = 176 (67.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 66/298 (22%), Positives = 134/298 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V FS +G +SS+D + +WE V N + L K+ V +
Sbjct: 879 RGHLSWVHCAMFSPDGSSFLTSSDDETIRLWETKKVCKNSAIVLNKKID--------VVF 930
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + +RR V +G + + C P +++ G++D +I +
Sbjct: 931 QENEVMVLAV---DNIRRLQVINGKTGQIDYLTEAQVSCCCLSPHLQYLAFGSDDGAIQV 987
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-TI 403
EL L + + + ++ T+DGK +I+ +SA+ + + +++ ++ Q T+
Sbjct: 988 LELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETVSLQAHQETV 1047
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
F L ++++ L + + + +WNI G ++ + H+ + + SC + +
Sbjct: 1048 KDFRLLKNSRLLSWSF-DGTVKVWNIITGRIE--KDFVCHQDT---VLSCDISPDATKFS 1101
Query: 463 SGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
S S D IW + L GH G V C +++ + +LA+ D+ IRIW + +
Sbjct: 1102 STSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFS-VDSTLLATGDDNGEIRIWNVSN 1158
Score = 135 (52.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/164 (23%), Positives = 80/164 (48%)
Query: 369 TSDGKQIITMCKESALLLLDREAKVERYIE----EDQTITSFSLSRDNKFLLVNLLNQEI 424
+ DG++I + + L + E E+ +E ED+ + + S D++F+ +++++
Sbjct: 624 SEDGQRIASCGADKTLQVFKAETG-EKLLEIKAHEDEVLCC-AFSADDRFIATCSVDKKV 681
Query: 425 HLWN-IEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQVYIWHRASCDLI 481
+WN + GE LV Y H + C +A+GS D + +W +
Sbjct: 682 KIWNSVTGE--LVQSYDEHSEQ---VNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECR 736
Query: 482 GALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKR 525
+ GH+ +V+ ++P + +LAS S D T+++W +K N ++
Sbjct: 737 NTMFGHTNSVSHCRFSP-DDKLLASCSADGTLKLWDVKSANERK 779
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 47/169 (27%), Positives = 74/169 (43%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
H D V S + +S+S D++A IW DL ++ H+L GH+ V C ++S D
Sbjct: 1084 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDL---LSPLHELRGHKGCVRCSAFSVDST 1140
Query: 290 QLLTCGVEEAVRRWDVSSGNCLH----VYEKAGLGLVSCGW------HPDRKWIFSGAND 339
L T +R W+VS+G LH V + G GW PD K + S
Sbjct: 1141 LLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHG-GWVTDLRFSPDGKMLVSAGG- 1198
Query: 340 KSICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ W + GK ++ + T + + V+ D K +T+ L +L
Sbjct: 1199 -YLKWWNVDSGKSIQTFYTNGT-NLKKIHVSPDFKTYVTVDNLGILYVL 1245
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 206 (77.6 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 78/299 (26%), Positives = 136/299 (45%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
+IL+GH+ E + FS + + L + S D + +W L+ GH V V+
Sbjct: 768 KILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGD---LEKTFVGHTGTVLSVAI 824
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
SSD +Q+++ G EAV+ WD ++G+ L G V+ + PD + I +G D I +
Sbjct: 825 SSDGRQIVS-GSIEAVKLWDAATGDLLKTLASGFAGSVA--FSPDSRQIAAGFKDGKIFI 881
Query: 345 WELGG---KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE-AKVERYIEED 400
W+ G K LE G I + + D KQ++T +S + D V+ +
Sbjct: 882 WDAAGTLQKTLERHPGA----IMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHS 937
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
+ +T+ LS D K + ++ I LW+ G+++ GH + V + F L+
Sbjct: 938 KHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLT--GHLDT--VEKVVFS-LDNR 992
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
I S S ++ V IW A+ + + V+ +P H +AS + I++W +
Sbjct: 993 QIVSCSSEA-VKIWDAATGKVQNSFESDD-VFTIVAVSPDGKH-IASGHCNGRIKLWDM 1048
Score = 204 (76.9 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 58/207 (28%), Positives = 99/207 (47%)
Query: 239 FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEE 298
FS + + +A+ D IW D G TL+ L H + +++S D +QL+TC +
Sbjct: 863 FSPDSRQIAAGFKDGKIFIW--DAAG--TLQKTLERHPGAIMSIAFSPDVKQLVTCSTDS 918
Query: 299 AVRRWDVSSGNCLHVYEKAGLG--LVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK 356
++RWD++ G V E G + + PD K I SG+ DK+I +W+ +L+
Sbjct: 919 TIKRWDITIGG---VQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTL 975
Query: 357 GQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIEEDQTITSFSLSRDNKFL 415
+ + + D +QI++ C A+ + D KV+ E D T ++S D K +
Sbjct: 976 TGHLDTVEKVVFSLDNRQIVS-CSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHI 1034
Query: 416 LVNLLNQEIHLWNIE-GEV-KLVAKYK 440
N I LW++ G + K +A Y+
Sbjct: 1035 ASGHCNGRIKLWDMATGSLLKTMAGYR 1061
Score = 186 (70.5 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 72/280 (25%), Positives = 128/280 (45%)
Query: 239 FSHNGKYLASSSNDR-SAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVE 297
FS + K +A+ R S I D G L+ L GH S +++SSD +QL+T V+
Sbjct: 737 FSADCKQIAAFGWSRDSTCIMLFDTATG-DLQKILKGHSHECSTMAFSSDSRQLVTGSVD 795
Query: 298 EAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKG 357
VR W+ ++G+ + ++S D + I SG+ + ++ +W+ +L K
Sbjct: 796 CTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDL--LKT 852
Query: 358 QRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-TITSFSLSRDNKFLL 416
+ + + D +QI K+ + + D +++ +E I S + S D K L+
Sbjct: 853 LASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGAIMSIAFSPDVKQLV 912
Query: 417 VNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRA 476
+ I W+I + V + GH S+ V + IASGS D + +W A
Sbjct: 913 TCSTDSTIKRWDIT--IGGVQEAVGH--SKHVTTMVLSP-DGKVIASGSADKTIKLWDAA 967
Query: 477 SCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ DL L GH V V ++ N +++ +S+ ++IW
Sbjct: 968 TGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE--AVKIW 1005
Score = 159 (61.0 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 49/161 (30%), Positives = 79/161 (49%)
Query: 210 TDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK 269
TD R I +Q GH+ V + S +GK +AS S D++ +W+ G L+
Sbjct: 916 TDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDA-ATGD--LQ 972
Query: 270 HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD 329
L+GH V V +S D++Q+++C EAV+ WD ++G + +E + + PD
Sbjct: 973 KTLTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIWDAATGKVQNSFESDDVFTI-VAVSPD 1030
Query: 330 RKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVT 369
K I SG + I +W++ G L+ G R+ K L T
Sbjct: 1031 GKHIASGHCNGRIKLWDMATGSLLKTMAGYRS-KFDSLVTT 1070
Score = 127 (49.8 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 58/247 (23%), Positives = 116/247 (46%)
Query: 297 EEAVRRWDVSSGNCLHVY--EKAGLGLVSCGWHPDRKWI--FSGANDKS-ICMWELGGKE 351
+E + +S N ++ E+ G GL + + D K I F + D + I +++ +
Sbjct: 706 QEIADHFGISKVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGD 765
Query: 352 LE-CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVER-YIEEDQTITSFSL 408
L+ KG + + S + +SD +Q++T + + L + +E+ ++ T+ S ++
Sbjct: 766 LQKILKGH-SHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAI 824
Query: 409 SRDNKFLLVNLLNQEIHLWNIE-GEV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSE 466
S D + ++ + + + LW+ G++ K +A S F F + IA+G +
Sbjct: 825 SSDGRQIVSGSI-EAVKLWDAATGDLLKTLA-------SGFAGSVAFSP-DSRQIAAGFK 875
Query: 467 DSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
D +++IW A L L H GA+ ++++P + L + S D TI+ W + V+
Sbjct: 876 DGKIFIWDAAGT-LQKTLERHPGAIMSIAFSP-DVKQLVTCSTDSTIKRWDITIGGVQEA 933
Query: 527 DCHSNGV 533
HS V
Sbjct: 934 VGHSKHV 940
Score = 124 (48.7 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 55/263 (20%), Positives = 113/263 (42%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GHT V + S +G+ + S S + + +W D G LK SG V++S D
Sbjct: 814 GHTGTVLSVAISSDGRQIVSGSIE-AVKLW--DAATGDLLKTLASGF---AGSVAFSPDS 867
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL- 347
+Q+ + + WD ++G E+ ++S + PD K + + + D +I W++
Sbjct: 868 RQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDIT 926
Query: 348 -GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIEED-QTIT 404
GG + + ++ + ++ DGK I + + + L D +++ + T+
Sbjct: 927 IGGVQEAVGHSKH---VTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVE 983
Query: 405 SFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASG 464
S DN+ +V+ ++ + +W+ K + S V + IASG
Sbjct: 984 KVVFSLDNR-QIVSCSSEAVKIWDAA-----TGKVQNSFESDDVFTIVAVSPDGKHIASG 1037
Query: 465 SEDSQVYIWHRASCDLIGALPGH 487
+ ++ +W A+ L+ + G+
Sbjct: 1038 HCNGRIKLWDMATGSLLKTMAGY 1060
Score = 105 (42.0 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 30/109 (27%), Positives = 57/109 (52%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSG-H------- 275
+Q L GH++ VW + FS +GK +AS S+ +W D G +L+ LSG H
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLW--DTTTG-SLQKTLSGSHPKRRYQI 669
Query: 276 -QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS 323
Q+ V +++ D + +++ + +V WD ++G+ + + G+ V+
Sbjct: 670 QQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKVN 718
Score = 71 (30.1 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAV--NCVSWNPANPHML------------AS 506
I S S D + +W A+ DL LP HS ++ + S + P+ + A+
Sbjct: 1098 ILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAA 1157
Query: 507 ASDDRTIRIWGL-KDLNVKRKDCHSNGVH 534
AS D+TIR+W + K L + + G H
Sbjct: 1158 ASADKTIRVWSIEKSLKASKYLGRAVGSH 1186
Score = 59 (25.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 503 MLASASDDRTIRIWGLK--DLNVKRKDCHSNGV 533
++ S S DR I++W DL KR CHS+ +
Sbjct: 1097 LILSTSTDRAIKLWDAATGDLQ-KRLPCHSDSI 1128
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 218 (81.8 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 78/303 (25%), Positives = 140/303 (46%)
Query: 227 LQGHTDEVWFLQFS--H-NGKY--LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
L+GHT + L + H N K LASSS D + IW+ + + LSGH V+C
Sbjct: 221 LKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLM---SLSGHTMSVTC 277
Query: 282 VSWSSDDQQLLTCGVEE-AVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+ W + L+ G ++ VR ++ + G + V + + + + D + +G+ D
Sbjct: 278 LKWGGEG--LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYV-LRTGSYDH 334
Query: 341 SICMWELGGKELECWK-GQRTL--KISDLEVTSDGKQIITMCKESALLLLDR----EAKV 393
+ GKE + + QR + +D++ S G +I+ + +++ + +
Sbjct: 335 T-------GKEYDTLEEAQRVALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSI 387
Query: 394 ERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
R Q I S S D ++ ++ I LW+ + K + ++GH + V + C+
Sbjct: 388 SRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSG-KFLGNFRGHVGA--VYQVCW 444
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ ++ SGS+DS + IW + + LPGH+ V V W+P + AS S DR +
Sbjct: 445 SS-DSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRV-ASGSKDRLL 502
Query: 514 RIW 516
RIW
Sbjct: 503 RIW 505
Score = 202 (76.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 80/327 (24%), Positives = 150/327 (45%)
Query: 201 SSDRDMSLYTDHQCG-RDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
S + +S+Y Q R + +R + GHT+ V FS +GK S D + IW+
Sbjct: 109 SDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWD 168
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL 319
+ + T H L GH V V+WS D +++ T G+E +R W +G L K
Sbjct: 169 IYTS---TPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHT 225
Query: 320 GLVS-CGWHP---DRKWI--FSGANDKSICMWELGG-KELECWKGQRTLKISDLEVTSDG 372
++ W P + K + S + D +I +W+ K L G T+ ++ L+ +G
Sbjct: 226 KFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGH-TMSVTCLKWGGEG 284
Query: 373 KQIITMCKESALLLLDR-EAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
I + ++ + + + + ++ R ++ + + +L+ D L + ++
Sbjct: 285 L-IYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDY-VLRTGSYDHTGKEYDTL 342
Query: 431 GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSG 489
E + VA + + +++ G+E + SGS+D V +W+ + I L GH
Sbjct: 343 EEAQRVALERYND-----VKAKSKGME--ILISGSDDFTVIMWNPSVTKTSISRLTGHQQ 395
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIW 516
+N VS++P + ASAS D++I++W
Sbjct: 396 LINLVSFSPDGRYF-ASASFDKSIKLW 421
Score = 180 (68.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 80/333 (24%), Positives = 147/333 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQ--FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSG 274
D S L+GHT+ W LQ +S + K +A++ + IW G L L G
Sbjct: 168 DIYTSTPTHTLKGHTN--WVLQVAWSPDSKKIATAGMEGDIRIWCPQT--GKQLGSTLKG 223
Query: 275 HQKPVSCVSW-----SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSC-GWH 327
H K ++ +SW + +L + + +R WD S C ++ +G + V+C W
Sbjct: 224 HTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTES--CKNLMSLSGHTMSVTCLKWG 281
Query: 328 PDRKWIFSGANDKSICMWEL-GGKELECWKGQ----RTLKISDLEVTSDGKQIITMCKES 382
+ I+SG+ D+++ ++ G+ + G TL ++ V G T KE
Sbjct: 282 GEGL-IYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTG-KEY 339
Query: 383 ALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGH 442
L + +ERY + + S+ + L+ + + +WN +++ GH
Sbjct: 340 DTLEEAQRVALERYNDVK------AKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGH 393
Query: 443 KRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
++ +I + + AS S D + +W S +G GH GAV V W+ ++
Sbjct: 394 QQ---LINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWS-SDSR 449
Query: 503 MLASASDDRTIRIWGLKDLNVKRK-DCHSNGVH 534
L S S D T++IW +K ++++ H++ V+
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKMEKELPGHADEVY 482
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 34/127 (26%), Positives = 60/127 (47%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ ++ L GH + + FS +G+Y AS+S D+S +W D G L + GH
Sbjct: 382 VTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLW--DGQSGKFLGN-FRGHVGA 438
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V V WSSD + L++ + ++ WD+ + + + W PD + SG+
Sbjct: 439 VYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSK 498
Query: 339 DKSICMW 345
D+ + +W
Sbjct: 499 DRLLRIW 505
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/171 (23%), Positives = 81/171 (47%)
Query: 371 DGKQIITMCKESALLLLDREAKVERYIEEDQT--ITSFSLSRDNKFLLVNLLNQEIHLWN 428
DGK +++ ++ + + D + + T + + S D+K + + +I +W
Sbjct: 151 DGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWC 210
Query: 429 IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQ----AFIASGSEDSQVYIWHRASCDLIGAL 484
+ +L + KGH ++F+ + +AS S+DS + IW SC + +L
Sbjct: 211 PQTGKQLGSTLKGH--TKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSL 268
Query: 485 PGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRK-DCHSNGVH 534
GH+ +V C+ W ++ S S DRT+R++ D + R D H++ V+
Sbjct: 269 SGHTMSVTCLKWGGEG--LIYSGSQDRTVRVFNTTDGRLVRVLDGHAHWVN 317
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 104/494 (21%), Positives = 210/494 (42%)
Query: 45 LEEESGIPLHS-SMVNLFTQQILDGHWDESLATLSKIGLVDESVVKSASFLILEQKFFEL 103
L+ E + L++ V F I G WD L +S++ L + + EQ E+
Sbjct: 30 LQSECQVSLNTVDSVETFISDINSGRWDSVLPQVSQLKLPRNKLED-----LYEQIVLEM 84
Query: 104 LDAEKVMDALKTLR-AEIAPLCIKNSRVRELXXXXXXXXXXXXXXXXXQDIVRAKSRXXX 162
++ ++ A LR ++ + + R L D + + R
Sbjct: 85 IELRELDTARAILRQTQVMGVMKQEQAERYLRMEHLLVRSYFDPHEAYGDSTKERKRAQI 144
Query: 163 XXXXXXXXXXMIMIPERRLEHLVEQALVLQREACMFHNSSDRDMSLYTD--HQCGRDQIP 220
+ ++P RL L+ QAL Q+ + + D+ T Q D P
Sbjct: 145 AQAVAAE---VTVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTAAMKQDVEDTHP 201
Query: 221 S-RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT--LKHKLSG--- 274
+ T I G +FS +G++LASSS D +W+ ++G + L+++
Sbjct: 202 NVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDY-ISGKLKKDLQYQADESFM 260
Query: 275 -HQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
H PV C+ +S D + L + + ++ W + +G C+ ++ G+ S + D +
Sbjct: 261 MHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQL 320
Query: 334 FSGANDKSICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK 392
S + D++ + L GK L+ ++G T ++ TSDG +IIT + + + D +
Sbjct: 321 LSTSFDQTARIHGLKSGKLLKEFRGH-TSYVNHAIFTSDGSRIITASSDCTVKVWDSKTT 379
Query: 393 --VERYIEE------DQTITSFSL-SRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYK-GH 442
++ + D ++ S L ++ + ++V I++ ++G+V V + G+
Sbjct: 380 DCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQV--VKSFSSGN 437
Query: 443 KRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
+ + +C G ED ++Y ++ S L + H V ++ +P + +
Sbjct: 438 REGGDFVAACVSTKGDWIYCIG-EDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHP-HRN 495
Query: 503 MLASASDDRTIRIW 516
+LA+ S+D T+++W
Sbjct: 496 LLATYSEDCTMKLW 509
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 218 (81.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 64/309 (20%), Positives = 141/309 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + L + GHT V ++ F +G L S S D +WEV N ++ + GH K
Sbjct: 275 LPKKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEV-YNERRCVRTFI-GHSK 332
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD---RKWIF 334
V V +++ Q L+ + ++ WD +G C+ + + ++PD + +
Sbjct: 333 AVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPYC-VKFNPDEDKQNLLV 391
Query: 335 SGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
+G +DK I W++ E+ + ++ + + ++ ++ + +L + + + +
Sbjct: 392 AGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPAD 451
Query: 395 -RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVI 449
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + +
Sbjct: 452 FKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYAC 511
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS--WNPANPHMLASA 507
+ F + +++ SG D ++ IW + L + H C+S W+P + +
Sbjct: 512 QVDFSP-DMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKV--CISALWHPHETSKVITC 568
Query: 508 SDDRTIRIW 516
D I++W
Sbjct: 569 GWDGQIKLW 577
>CGD|CAL0002548 [details] [associations]
symbol:orf19.5131 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0034657 "GID complex"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045721 "negative regulation
of gluconeogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002548 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:NOG281318 EMBL:AACQ01000061
EMBL:AACQ01000060 RefSeq:XP_716886.1 RefSeq:XP_716954.1
RefSeq:XP_888932.1 ProteinModelPortal:Q5A5F1 GeneID:3641368
GeneID:3641461 GeneID:3704173 KEGG:cal:CaO19.12596
KEGG:cal:CaO19.5131 KEGG:cal:CaO19_5131 Uniprot:Q5A5F1
Length = 720
Score = 168 (64.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 47/156 (30%), Positives = 75/156 (48%)
Query: 387 LDREAKVERY--IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE----GEVK---LVA 437
L EA R I +TS S+S + K+LL++ +E+ +W++ E L
Sbjct: 566 LGEEATTRRICNIHFKGRLTSCSISHNGKYLLISSAPEELQVWDLSPLLVNESNRPILYR 625
Query: 438 KYKGHKRSRFVIRSCFGGL-----EQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN 492
KY GH +S +++RS G L ++ + +GS+ +Y W + LI + GH G N
Sbjct: 626 KYLGHTQSSYIVRSTLGYLNEDNDQEELVLTGSDHGYIYFWKFTTGQLITRIKGHVGLCN 685
Query: 493 CVSWNPANPHML---------ASASDDRTIRIWGLK 519
V WN N ++ AS DD+ ++IWG K
Sbjct: 686 GVDWN-RNGMVIKGKDYGKIWASVGDDKLVKIWGSK 720
Score = 110 (43.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 362 KISDLEVTSDGKQIITMCKESALLL-----LDREAKVERY--IEEDQTITSFSLSRDNKF 414
+I+DL +T++GK +IT+ L EA R I +TS S+S + K+
Sbjct: 536 RINDLVITNNGKILITLNDHQLHFYTVPDTLGEEATTRRICNIHFKGRLTSCSISHNGKY 595
Query: 415 LLVNLLNQEIHLWNIE----GEVK---LVAKYKGHKRSRFVIRSCFGGLEQ 458
LL++ +E+ +W++ E L KY GH +S +++RS G L +
Sbjct: 596 LLISSAPEELQVWDLSPLLVNESNRPILYRKYLGHTQSSYIVRSTLGYLNE 646
Score = 90 (36.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK 269
L L H DEVWF++FS +GK+L + S D ++++V LN +K
Sbjct: 267 LHTLTYHKDEVWFVKFSPSGKFLVTGSLDGRLVLYDV-LNNFQLIK 311
Score = 55 (24.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 261 DLNGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG-NCLHVYEKAG 318
+ NG T L H L+ H+ V V +S + L+T ++ + +DV + + V E
Sbjct: 258 NFNGNTTTLLHTLTYHKDEVWFVKFSPSGKFLVTGSLDGRLVLYDVLNNFQLIKVLEPT- 316
Query: 319 LGLVSCGWHPDRKWIFSGANDKSI--CMWE 346
+ + + P S N+K++ C W+
Sbjct: 317 MAADNTAFSPISTRPTSSKNNKAVIYCCWD 346
Score = 52 (23.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 273 SGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
S + K V W +Q +++C ++ +R W V
Sbjct: 334 SKNNKAVIYCCWDPKEQYIVSCCLDTVIRVWSV 366
Score = 52 (23.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 316 KAGLGLVSCGWHPDRKWIFSGANDKSICMWELG 348
K ++ C W P ++I S D I +W +G
Sbjct: 335 KNNKAVIYCCWDPKEQYIVSCCLDTVIRVWSVG 367
>UNIPROTKB|Q5A5F1 [details] [associations]
symbol:CaO19.12596 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002548 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:NOG281318 EMBL:AACQ01000061
EMBL:AACQ01000060 RefSeq:XP_716886.1 RefSeq:XP_716954.1
RefSeq:XP_888932.1 ProteinModelPortal:Q5A5F1 GeneID:3641368
GeneID:3641461 GeneID:3704173 KEGG:cal:CaO19.12596
KEGG:cal:CaO19.5131 KEGG:cal:CaO19_5131 Uniprot:Q5A5F1
Length = 720
Score = 168 (64.2 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 47/156 (30%), Positives = 75/156 (48%)
Query: 387 LDREAKVERY--IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE----GEVK---LVA 437
L EA R I +TS S+S + K+LL++ +E+ +W++ E L
Sbjct: 566 LGEEATTRRICNIHFKGRLTSCSISHNGKYLLISSAPEELQVWDLSPLLVNESNRPILYR 625
Query: 438 KYKGHKRSRFVIRSCFGGL-----EQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN 492
KY GH +S +++RS G L ++ + +GS+ +Y W + LI + GH G N
Sbjct: 626 KYLGHTQSSYIVRSTLGYLNEDNDQEELVLTGSDHGYIYFWKFTTGQLITRIKGHVGLCN 685
Query: 493 CVSWNPANPHML---------ASASDDRTIRIWGLK 519
V WN N ++ AS DD+ ++IWG K
Sbjct: 686 GVDWN-RNGMVIKGKDYGKIWASVGDDKLVKIWGSK 720
Score = 110 (43.8 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 33/111 (29%), Positives = 56/111 (50%)
Query: 362 KISDLEVTSDGKQIITMCKESALLL-----LDREAKVERY--IEEDQTITSFSLSRDNKF 414
+I+DL +T++GK +IT+ L EA R I +TS S+S + K+
Sbjct: 536 RINDLVITNNGKILITLNDHQLHFYTVPDTLGEEATTRRICNIHFKGRLTSCSISHNGKY 595
Query: 415 LLVNLLNQEIHLWNIE----GEVK---LVAKYKGHKRSRFVIRSCFGGLEQ 458
LL++ +E+ +W++ E L KY GH +S +++RS G L +
Sbjct: 596 LLISSAPEELQVWDLSPLLVNESNRPILYRKYLGHTQSSYIVRSTLGYLNE 646
Score = 90 (36.7 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK 269
L L H DEVWF++FS +GK+L + S D ++++V LN +K
Sbjct: 267 LHTLTYHKDEVWFVKFSPSGKFLVTGSLDGRLVLYDV-LNNFQLIK 311
Score = 55 (24.4 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 261 DLNGGVT-LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG-NCLHVYEKAG 318
+ NG T L H L+ H+ V V +S + L+T ++ + +DV + + V E
Sbjct: 258 NFNGNTTTLLHTLTYHKDEVWFVKFSPSGKFLVTGSLDGRLVLYDVLNNFQLIKVLEPT- 316
Query: 319 LGLVSCGWHPDRKWIFSGANDKSI--CMWE 346
+ + + P S N+K++ C W+
Sbjct: 317 MAADNTAFSPISTRPTSSKNNKAVIYCCWD 346
Score = 52 (23.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 273 SGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
S + K V W +Q +++C ++ +R W V
Sbjct: 334 SKNNKAVIYCCWDPKEQYIVSCCLDTVIRVWSV 366
Score = 52 (23.4 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 316 KAGLGLVSCGWHPDRKWIFSGANDKSICMWELG 348
K ++ C W P ++I S D I +W +G
Sbjct: 335 KNNKAVIYCCWDPKEQYIVSCCLDTVIRVWSVG 367
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 217 (81.4 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 78/304 (25%), Positives = 140/304 (46%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
P++ L + H +E +++S + +A+ DR +W++ N + LSG +
Sbjct: 307 PTKILMKFEAHENESHAVRWSPVERMVATGGADRKVKLWDIGKNS-TEPRAVLSGSSAGI 365
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAND 339
+ V + S +L + R W V H +++ + + + +G++D
Sbjct: 366 NSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTLTGHSGKVMAAKYVQEPIKVVTGSHD 425
Query: 340 KSICMWELGGKELECWKGQRT-LKISDLEVTSD--GKQIITMCKESALLLLD-REAKVER 395
+++ +W+L + + C + + +DL VT+D G II+ + + D R K
Sbjct: 426 RTLKIWDL--RSIACIETKFAGSSCNDL-VTTDSLGSTIISGHYDKKIRFWDIRTEKQAD 482
Query: 396 YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGH-KRSRFVIRSCFG 454
+ ITS LS+D +L+ ++ + I L ++ + H K S R+ F
Sbjct: 483 DVLMPAKITSLDLSKDCNYLICSVRDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFN 542
Query: 455 --GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
GL+ IA GS D +YIW+ + L L GHS AVN VSW+P N +MLAS ++
Sbjct: 543 SSGLK---IACGSADGAIYIWN-VNGFLEATLKGHSTAVNAVSWSPNN-NMLASVGKNKR 597
Query: 513 IRIW 516
I+
Sbjct: 598 CTIY 601
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 66/332 (19%), Positives = 146/332 (43%)
Query: 199 HNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEV----WFLQFSHNGKYLASSSNDRS 254
H D ++L ++ + +P + GH + WF + +H L S S D
Sbjct: 253 HAPHDLGVNLRSNAPPTKCFLPKAHIHTWSGHNKGISSIRWFPKTAH---LLLSGSMDCR 309
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY 314
+WEV G SGH++ + ++W++ L+ + ++ WD +G+ + +
Sbjct: 310 VKLWEV--YGERRCIRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAETGDVVSRF 367
Query: 315 EKAGLGLVSCGWHPD--RKWIF-SGANDKSICMWELGGKELECWKGQRTLKISDLEVTSD 371
+ +HPD ++ +F +G +DK I W+ ++ + +S + D
Sbjct: 368 TTRKMPFC-VKFHPDNSKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGSVSTITFVDD 426
Query: 372 GKQIITMCKESALLLLDREAKVE-RYIEED--QTITSFSLSRDNKFLLVNLLNQEIHLWN 428
++ +T + ++ + + + V+ +YI + ++ + +L+ + K++ L+ +I +++
Sbjct: 427 NRRFVTTSDDKSMRIWEWDIPVDMKYIADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFS 486
Query: 429 IEGEVKLVAK--YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG 486
K+ K + GH S + + F + +++ SG D + YIW + +
Sbjct: 487 ALNRFKMNRKKTFTGHMVSGYACQLDFSP-DMSYLVSGDGDGKCYIWDWKTTKMYKKWQA 545
Query: 487 HSGAVNCVS--WNPANPHMLASASDDRTIRIW 516
H G C+S W+P + +A D I+ W
Sbjct: 546 HDGV--CISALWHPHEASKVVTAGWDGQIKYW 575
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 216 (81.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 75/307 (24%), Positives = 138/307 (44%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R+ ++L+GH D V G + S S+D + +W G L+ L GH V
Sbjct: 293 RSPKVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV-- 346
Query: 282 VSWSSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAND 339
WSS D +++ + ++ W+ +G C+H V C H K + SG+ D
Sbjct: 347 --WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRD 402
Query: 340 KSICMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYI 397
++ +W++ G+ L G ++ + V DG+++++ + + + D E + +
Sbjct: 403 ATLRVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHT 458
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE 457
+ T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 459 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGME 510
Query: 458 --QAFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRT 512
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK---NFVITSSDDGT 567
Query: 513 IRIWGLK 519
+++W LK
Sbjct: 568 VKLWDLK 574
Score = 184 (69.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 59/257 (22%), Positives = 120/257 (46%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 331 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 385
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 386 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 441
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 442 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 498
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ + + +G + + + +C
Sbjct: 499 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTG-QCLQTLQGPSKHQSAV-TCLQ-F 554
Query: 457 EQAFIASGSEDSQVYIW 473
+ F+ + S+D V +W
Sbjct: 555 NKNFVITSSDDGTVKLW 571
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 116/528 (21%), Positives = 229/528 (43%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +++I + L S L+EE+GI L++ F + +G+WD L +S
Sbjct: 14 IQSQDVIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDVKNGNWDSVLTVVS 73
Query: 79 KIGLVDESVVKSASFLI-LEQKFFELLDAEKVMDALKTLRAEIAPL-CIK-NSRVRELXX 135
+ L S + L+ L ++ ELL K + K L + PL +K N + R L
Sbjct: 74 TLRL-------STTLLMDLYEQIVELLHL-KEYELCKYLIRKTEPLNYMKLNQQERYLKL 125
Query: 136 XXXXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQR-- 193
+ + + R +I +P RL L+ Q+L Q+
Sbjct: 126 ENHLQREYIDLGDFYKYGITTEKRRKQLIEQLNNE--IITVPSSRLLSLLSQSLHWQKHQ 183
Query: 194 ----EACMFHNSSDRDMSLYTDHQCGRDQIPS---RTLQILQGHTDEVWFLQFSHNGKYL 246
+ CM + ++ + + +QI + +T++ + E ++FS + KYL
Sbjct: 184 GIIPDDCMEFDLFKGEVP-FKKIESEEEQITTVLDKTIKFNNKNKPET--IKFSPDSKYL 240
Query: 247 ASSSNDRSAIIWEVDLNGGV---TLKHKLSG----HQKPVSCVSWSSDDQQLLTCGVEEA 299
+ S D +W D N G +L ++ + H + C+++S D + L T ++
Sbjct: 241 LTGSMDGFIEVW--DYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFLATGSLDNK 298
Query: 300 VRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL-GGKELECWKG 357
++ W + SG CL +E A V+C + + I SG+ D S+ + L GK L+ ++G
Sbjct: 299 IKVWQIKSGKCLRKFEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGLKSGKALKIFRG 358
Query: 358 QRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLS-RDNKFL 415
++ ++D D ++I+ + + + D + + + I +T +S R L
Sbjct: 359 HQSF-VNDCCFNHDEDRVISCSSDGKIKIWDAKSSDCLQTITPTSVVTVRDISIRSITIL 417
Query: 416 LVN---LL---NQEIHLWNIEGEVKLVAK-YKGHKRSRFVIRSCFGGLEQAFIASGSEDS 468
L N LL + +I + +++ + ++K + F++ C Q ++ + ED+
Sbjct: 418 LKNPEFLLVCNSSQISIVSMKSQT--ISKTFTSENSKTFLV--CTLSPLQNYLYAVDEDN 473
Query: 469 QVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+Y + S L+ H V +S +P ++LA+ D ++IW
Sbjct: 474 ILYTFDFNSGSLLNKFKIHDQEVISISHHPTK-NLLATTGSDCLLKIW 520
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 220 (82.5 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 78/310 (25%), Positives = 144/310 (46%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+++ HTD V+ FS +G+ +AS D++ +++ + G L K H+ V C ++S
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE-TGEKLLDIK--AHEDEVLCCAFS 666
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW--HPDRKWIFSGANDKSIC 343
SDD + TC V++ V+ WD +G +H YE+ + C + + + +G+ND +
Sbjct: 667 SDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLK 726
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQT 402
+W+L KE T ++ + D + + + + L L D R A ++ I
Sbjct: 727 LWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSIN---- 782
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGE-VKLVAKYK---------G-----HKRSRF 447
+ F LS ++ V ++ + W+ +G+ + + AK K G H
Sbjct: 783 VKRFFLSSEDPPEDVEVI-VKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHS 841
Query: 448 VIRSC-FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLAS 506
I+ C F + + + S+ V +W+ S + GH V+ V ++P L +
Sbjct: 842 TIQYCDFSPYDHLAVIALSQYC-VELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFL-T 899
Query: 507 ASDDRTIRIW 516
ASDD+TIR+W
Sbjct: 900 ASDDQTIRVW 909
Score = 163 (62.4 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 63/299 (21%), Positives = 134/299 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G ++S+D++ +WE V N + LK ++ V +
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQEID--------VVF 930
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + +R + +G + + C P +++ G + +I +
Sbjct: 931 QENEMMVLAV---DNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKI 987
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-T 402
EL + G + + ++ T+DGK +I+ ++S + + + + + +++ Q T
Sbjct: 988 IELPNNRVFSSGIGHKKA-VRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQET 1046
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ F L RD++ L + + + +WN I G ++ + H+ + + SC +
Sbjct: 1047 VKDFRLLRDSRLLSWSF-DGTVKVWNVITGRIE--RDFTCHQGT---VLSCAISSDATKF 1100
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+S S D IW + L GH+ V C +++ + +LA+ D+ IRIW + D
Sbjct: 1101 SSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFS-LDGILLATGDDNGEIRIWNVSD 1158
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 37/163 (22%), Positives = 79/163 (48%)
Query: 369 TSDGKQIITMCKESALLLLDREAKVERYIE----EDQTITSFSLSRDNKFLLVNLLNQEI 424
+ DG++I + + L + E E+ ++ ED+ + + S D+ ++ +++++
Sbjct: 624 SQDGQRIASCGADKTLQVFKAETG-EKLLDIKAHEDEVLCC-AFSSDDSYIATCSVDKKV 681
Query: 425 HLWNIEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQVYIWHRASCDLIG 482
+W+ G KLV Y+ H + C +A+GS DS + +W +
Sbjct: 682 KIWD-SGTGKLVHTYEEHSEQ---VNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRN 737
Query: 483 ALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKR 525
+ GH+ +V ++P + +LAS S D T+++W ++ N K+
Sbjct: 738 TMFGHTNSVTHCRFSP-DDELLASCSADGTLKLWDVRSANEKK 779
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 153 (58.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 45/183 (24%), Positives = 87/183 (47%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
HT V + FS++GK L S+S D S ++++ + +G +KL GH+ V C +S D+
Sbjct: 66 HTRAVRSVAFSNDGKCLVSASFDASVVVYQQE-DGEFAEVNKLEGHESEVKCAVFSKSDE 124
Query: 290 QLLTCGVEEAVRRW------DVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
L TC +++V W D S + L + + + WHP + S + D SI
Sbjct: 125 FLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQ---DVKQVAWHPTEDLLVSCSYDSSIR 181
Query: 344 MWELGGKELECWKGQRTLK------ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+ G++ W Q+ + + + ++G +++T+ ++ + L RE +
Sbjct: 182 FYRFDGED---WVTQQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSA 238
Query: 398 EED 400
++D
Sbjct: 239 DQD 241
Score = 112 (44.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH EV FS + ++LA+ S D+S W+ D + ++ L H + V V+W
Sbjct: 107 LEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHP 166
Query: 287 DDQQLLTCGVEEAVR--RWD 304
+ L++C + ++R R+D
Sbjct: 167 TEDLLVSCSYDSSIRFYRFD 186
Score = 102 (41.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 434 KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASC------DLIGALPGH 487
K VA+Y + +R+ + S IA+G D ++ ++ +S + +G + H
Sbjct: 244 KSVARYDV-ENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKISSTPESPVIEHLGVVGRH 302
Query: 488 SGAVNCVSWNPANP---HMLASASDDRTIRIWGLK 519
VN V+WNP NP ++L SASDD TIR+W L+
Sbjct: 303 ELDVNHVAWNP-NPKFSNLLTSASDDGTIRLWELE 336
Score = 97 (39.2 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 231 TDEVWFLQFSHNGKYLASSSNDRSAIIW----EVDLNGGVTLKHKLS-GHQKPVSCVSWS 285
T VW + H G+ LAS +D++ +W E D + + L H + V V++S
Sbjct: 17 TSRVWMTCWHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFS 76
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL-GLVSCG-WHPDRKWIFSGANDKSIC 343
+D + L++ + +V + G V + G V C + +++ + + DKS+
Sbjct: 77 NDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVW 136
Query: 344 MWE 346
W+
Sbjct: 137 FWQ 139
Score = 68 (29.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 198 FHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAII 257
F + RD S++ Q D+ S + ILQ HT +V + + L S S D S
Sbjct: 125 FLATCSRDKSVWFWQQ-DEDEDFSVS-SILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRF 182
Query: 258 WEVDLNGGVTLKHKLSG-HQKPVSCVSWSSDDQQLLTCGVEEAVR 301
+ D VT + K+ G H V +++ ++ +L+T G + ++
Sbjct: 183 YRFDGEDWVT-QQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQ 226
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 153 (58.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 45/183 (24%), Positives = 87/183 (47%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
HT V + FS++GK L S+S D S ++++ + +G +KL GH+ V C +S D+
Sbjct: 66 HTRAVRSVAFSNDGKCLVSASFDASVVVYQQE-DGEFAEVNKLEGHESEVKCAVFSKSDE 124
Query: 290 QLLTCGVEEAVRRW------DVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
L TC +++V W D S + L + + + WHP + S + D SI
Sbjct: 125 FLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQ---DVKQVAWHPTEDLLVSCSYDSSIR 181
Query: 344 MWELGGKELECWKGQRTLK------ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+ G++ W Q+ + + + ++G +++T+ ++ + L RE +
Sbjct: 182 FYRFDGED---WVTQQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSA 238
Query: 398 EED 400
++D
Sbjct: 239 DQD 241
Score = 112 (44.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 24/80 (30%), Positives = 43/80 (53%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH EV FS + ++LA+ S D+S W+ D + ++ L H + V V+W
Sbjct: 107 LEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQPHTQDVKQVAWHP 166
Query: 287 DDQQLLTCGVEEAVR--RWD 304
+ L++C + ++R R+D
Sbjct: 167 TEDLLVSCSYDSSIRFYRFD 186
Score = 102 (41.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 32/95 (33%), Positives = 51/95 (53%)
Query: 434 KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASC------DLIGALPGH 487
K VA+Y + +R+ + S IA+G D ++ ++ +S + +G + H
Sbjct: 244 KSVARYDV-ENTRWPLYSVAWNSTNDVIATGGGDCKIRLFKISSTPESPVIEHLGVVGRH 302
Query: 488 SGAVNCVSWNPANP---HMLASASDDRTIRIWGLK 519
VN V+WNP NP ++L SASDD TIR+W L+
Sbjct: 303 ELDVNHVAWNP-NPKFSNLLTSASDDGTIRLWELE 336
Score = 97 (39.2 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 231 TDEVWFLQFSHNGKYLASSSNDRSAIIW----EVDLNGGVTLKHKLS-GHQKPVSCVSWS 285
T VW + H G+ LAS +D++ +W E D + + L H + V V++S
Sbjct: 17 TSRVWMTCWHHGGRILASCGDDKAVRVWSLVGEPDSKMRLECRTTLDDSHTRAVRSVAFS 76
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL-GLVSCG-WHPDRKWIFSGANDKSIC 343
+D + L++ + +V + G V + G V C + +++ + + DKS+
Sbjct: 77 NDGKCLVSASFDASVVVYQQEDGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVW 136
Query: 344 MWE 346
W+
Sbjct: 137 FWQ 139
Score = 68 (29.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 28/105 (26%), Positives = 49/105 (46%)
Query: 198 FHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAII 257
F + RD S++ Q D+ S + ILQ HT +V + + L S S D S
Sbjct: 125 FLATCSRDKSVWFWQQ-DEDEDFSVS-SILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRF 182
Query: 258 WEVDLNGGVTLKHKLSG-HQKPVSCVSWSSDDQQLLTCGVEEAVR 301
+ D VT + K+ G H V +++ ++ +L+T G + ++
Sbjct: 183 YRFDGEDWVT-QQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQ 226
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 215 (80.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 70/302 (23%), Positives = 132/302 (43%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P+ + + H EV +QFS + LA+ DR +WEV L K LSG
Sbjct: 309 RVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEV-LGDRCEPKGSLSGSNA 367
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA 337
++ + + S LL + A R W V H ++S + D I SG+
Sbjct: 368 GITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGS 427
Query: 338 NDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERY 396
+D+++ +W+L K +D+ T + +++ + + D R + +
Sbjct: 428 HDRTLKLWDLRSKVCNIKTVFAGSSCNDIVCTE--QCVMSGHFDKKIRFWDIRTESIVKE 485
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGG 455
+E IT+ L+ + LL + + + ++ G VK +G K R F
Sbjct: 486 LELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSP 545
Query: 456 LEQAFIASGSEDSQVYIWHRASCDLIGALPGH-SGAVNCVSWNPANPHMLASASDDRTIR 514
+ ++A+GS D +Y+W+ + L L H S +N V+W+PA H+++ ++ +
Sbjct: 546 -DGNYVAAGSADGALYVWNVLTGKLERTLAKHHSSPINAVAWSPAGAHVVSVDKGNKAV- 603
Query: 515 IW 516
+W
Sbjct: 604 LW 605
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/306 (19%), Positives = 136/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 277 LPKKQIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEV--YGDRRCLRTFIGHGK 334
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ + L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 335 AVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 394
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 395 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 454
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 455 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 514
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG D ++ IW + L + H W+P + + D
Sbjct: 515 VDFSP-DMSYVISGDADGKLNIWDWKTTKLYSRIKAHDKVCIGAVWHPHETSKVITCGWD 573
Query: 511 RTIRIW 516
I++W
Sbjct: 574 GLIKLW 579
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 203 (76.5 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 62/242 (25%), Positives = 109/242 (45%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
++++ GKY+ ++ N+R +W V G + H+ +GH + + D + +CG
Sbjct: 20 VKYNRTGKYVLAAGNERVVRLWNV--KSGACI-HEYAGHGHEILDLDLVYDSTKFASCGG 76
Query: 297 EEAVRRWDVSSGNCLHVYEKAGLGLVSCG---WHPDRKWIFSGANDKSICMWELGGKELE 353
++ ++ WDV++G V + G L ++ D + SG+ D + +W+
Sbjct: 77 DKFIQVWDVNTGK---VDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFS 133
Query: 354 CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVER-YIEEDQTITSFSLSRD 411
+ K S + I+T + L D R+ + Y ITS S+
Sbjct: 134 PIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHP--ITSVKTSKS 191
Query: 412 NKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVY 471
F L++ LN IHL + E K++ Y G K + +RS F E + SGSED +VY
Sbjct: 192 ASFSLISSLNSSIHLLDQETG-KILKSYIGLKNMEYRVRSSFNQSE-TIVFSGSEDGKVY 249
Query: 472 IW 473
+W
Sbjct: 250 LW 251
Score = 116 (45.9 bits), Expect = 0.00055, P = 0.00055
Identities = 32/121 (26%), Positives = 55/121 (45%)
Query: 269 KHKLSGHQK-PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
K KLS K P++ V ++ + +L G E VR W+V SG C+H Y G ++
Sbjct: 6 KTKLSSKAKEPINVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLV 65
Query: 328 PDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
D S DK I +W++ +++ G +I+ + D + + +S + L
Sbjct: 66 YDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLW 125
Query: 388 D 388
D
Sbjct: 126 D 126
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 210 (79.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 65/292 (22%), Positives = 131/292 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH D + L FS +GK +AS S D S ++W + ++ +GH+ V+CV +S
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRA---YRFTGHKDAVTCVQFSPS 71
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLV-SCGWHPDRKWIFSGANDKSICMWE 346
L + ++ VR W V S V +A G V S + D + + + ++D+SI +W
Sbjct: 72 AHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWS 130
Query: 347 LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTIT 404
+ +++ C + + + DG+ ++++ + + L D ++ + + E +
Sbjct: 131 VHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSS 190
Query: 405 SFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASG 464
+ + + + +W+I L+ Y+ H + + G + +
Sbjct: 191 YVDFHPSSTCIATASSDNTVRVWDIRTHT-LLQHYQVHSAAVNALSFHPSGNH---LLTA 246
Query: 465 SEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
S DS + I L+ L GH G+ +CVS++ + ASA D+ + +W
Sbjct: 247 SSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQF-ASAGSDQQVMVW 297
Score = 162 (62.1 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 52/208 (25%), Positives = 98/208 (47%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGV-TLKHKLSGHQKPVSCVSW 284
+ + HT V + FS +G+ L ++S+D+S +W V + TL+ H V C +
Sbjct: 97 LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLRE----HNNWVRCARF 152
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFSGANDKSIC 343
S D Q +++ + V+ WD SS +H + + G G S +HP I + ++D ++
Sbjct: 153 SPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG-GYSSYVDFHPSSTCIATASSDNTVR 211
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYIEEDQ- 401
+W++ L + ++ L G ++T +S L +LD E ++ + Q
Sbjct: 212 VWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQG 271
Query: 402 --TITSFSLSRDNKFLLVNLLNQEIHLW 427
+ SFS S D +F +Q++ +W
Sbjct: 272 SASCVSFSRSGD-QFASAGS-DQQVMVW 297
Score = 155 (59.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 55/256 (21%), Positives = 114/256 (44%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC- 324
TL+ GH+ ++ + +S +Q+ + V+ +V W++ + Y G V+C
Sbjct: 9 TLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQS--RAYRFTGHKDAVTCV 66
Query: 325 GWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
+ P + S + DK++ +W K T + + ++DG+ ++T + ++
Sbjct: 67 QFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSI 126
Query: 385 LL--LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGH 442
L + R+ + E + + S D + ++ ++ + LW+ + +
Sbjct: 127 KLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPG 186
Query: 443 KRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
S +V F IA+ S D+ V +W + L+ HS AVN +S++P+ H
Sbjct: 187 GYSSYVD---FHP-SSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNH 242
Query: 503 MLASASDDRTIRIWGL 518
+L +AS D T++I L
Sbjct: 243 LL-TASSDSTLKILDL 257
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 44/184 (23%), Positives = 86/184 (46%)
Query: 355 WKGQRTLKISDLEVTSDGKQIITMCKESALLL--LDREAKVERYIEEDQTITSFSLSRDN 412
+KG R I+ L+ + GKQI + ++++++ + +++ R+ +T S
Sbjct: 14 FKGHRDA-ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSA 72
Query: 413 KFLLVNLLNQEIHLW--NIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQV 470
L + ++ + LW +++GE L + G RS CF Q+ + + S+D +
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRS-----VCFSADGQSLLTA-SDDQSI 126
Query: 471 YIW--HRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDC 528
+W HR +I L H+ V C ++P + ++ S SDDRT+++W + C
Sbjct: 127 KLWSVHRQK--IICTLREHNNWVRCARFSP-DGQLMVSVSDDRTVKLWDASSRQLIHTFC 183
Query: 529 HSNG 532
G
Sbjct: 184 EPGG 187
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 49/218 (22%), Positives = 99/218 (45%)
Query: 321 LVSCGWHPDRKWIFSGANDKSICMWELGGKELEC-WKGQRTLKISDLEVTSDGKQIITMC 379
+ S + P K I SG+ D S+ +W + + + G + ++ ++ + + +
Sbjct: 21 ITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDA-VTCVQFSPSAHLLASSS 79
Query: 380 KESALLLLDREAKVERYIEEDQT--ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
++ + L K E + T + S S D + LL +Q I LW++ + K++
Sbjct: 80 RDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQ-KIIC 138
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
+ H + +V + F Q + S S+D V +W +S LI G + V ++
Sbjct: 139 TLREH--NNWVRCARFSPDGQLMV-SVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFH 195
Query: 498 PANPHMLASASDDRTIRIWGLKDLNV-KRKDCHSNGVH 534
P++ +A+AS D T+R+W ++ + + HS V+
Sbjct: 196 PSST-CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVN 232
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 213 (80.0 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 67/323 (20%), Positives = 146/323 (45%)
Query: 206 MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNG 264
++L D+ R +P + + +GH V FLQ F + S S D +WEV
Sbjct: 250 VNLREDYVPERCFVPKKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQ 309
Query: 265 GVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS- 323
V + +GH+ PV V+++++ + L+ + V+ WD +G V ++ G V
Sbjct: 310 RVVRTY--AGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQ---VKQRFHTGHVPY 364
Query: 324 C-GWHPD--RKWIFS-GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMC 379
C +HPD + +F G +K I W+ E+ + ++ + ++ +
Sbjct: 365 CLKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRRFASTS 424
Query: 380 KESALLLLDREAKVERYIEED---QTITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKL 435
+ ++ + + E V+ + ++ I + + S ++K+++ ++ I L+ ++ +++
Sbjct: 425 DDKSVRIWEWEIPVDTKLIQNVGLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVDDKLRF 484
Query: 436 VAK--YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNC 493
K ++GH + + F +Q+F+ SG D +++IW + ++G H
Sbjct: 485 SKKKAFRGHNAAGYACNIDFSP-DQSFLISGDADGKLFIWDWRTHKIVGKWKAHDSTCIA 543
Query: 494 VSWNPANPHMLASASDDRTIRIW 516
W+P + +A D I++W
Sbjct: 544 ALWHPHEKSRMITAGWDGLIKMW 566
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 213 (80.0 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 67/257 (26%), Positives = 121/257 (47%)
Query: 221 SRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVS 280
S LQ L+GH V + +SH+ + LAS+S+DR+ IW+ + +L+H L GH V
Sbjct: 286 SPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETG---SLQHTLEGHSDLVR 342
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
V +S D + LL + V+ WD +G+ H E + S + D + + S ++D
Sbjct: 343 SVIFSHDSR-LLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 341 SICMWELGGKELE-CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYIE 398
++ +W+ G L+ +G R + + + D + + + +S + + D ++ +E
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDW-VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Query: 399 EDQT-ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ + S S D++ L ++ + +W+ E G K + GH S V F
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLE--GH--SSLVTSVSFSH- 515
Query: 457 EQAFIASGSEDSQVYIW 473
+ +AS S D V IW
Sbjct: 516 DSRLLASASNDQTVRIW 532
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 62/233 (26%), Positives = 114/233 (48%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S DR + ++ D + G Q L+GH+D V + FSH+ + LAS+S D + IW+
Sbjct: 315 SDDRTVKIW-DTETGSLQ------HTLEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDT 366
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG 320
G +L+H L GH+ V V +S D Q L + + V+ WD +G+ H E
Sbjct: 367 ---GTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDW 423
Query: 321 LVSCGWHPDRKWIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLEVTSDGKQIITMC 379
+ S + D + + S ++D ++ +W+ G L+ +G R + + + D + + +
Sbjct: 424 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDW-VRSVIFSHDSRLLASAS 482
Query: 380 KESALLLLDREAKVERYIEEDQT--ITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
+ + + D E ++ E + +TS S S D++ L +Q + +W+IE
Sbjct: 483 DDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIE 535
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 64/251 (25%), Positives = 118/251 (47%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH+ V VS+S D + L + + V+ WD +G+ H E + S + D +
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSR 351
Query: 332 WIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR- 389
+ + A+D ++ +W+ G L+ +G R + + + D + + + +S + + D
Sbjct: 352 -LLASASDSTVKIWDTGTGSLQHTLEGHRDW-VRSVIFSHDSQLLASASDDSTVKIWDTG 409
Query: 390 EAKVERYIEEDQT-ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV 448
++ +E + + S S D++ L + + +W+ G L +GH R
Sbjct: 410 TGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT-GTGSLQHTLEGH---RDW 465
Query: 449 IRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS 508
+RS + +AS S+D V IW L GHS V VS++ + +LASAS
Sbjct: 466 VRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH-DSRLLASAS 524
Query: 509 DDRTIRIWGLK 519
+D+T+RIW ++
Sbjct: 525 NDQTVRIWDIE 535
Score = 182 (69.1 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 40/127 (31%), Positives = 69/127 (54%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH D V + FSH+ + LAS+S+D + IW+ G +L+H L GH+ V V +S
Sbjct: 417 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT---GTGSLQHTLEGHRDWVRSVIFSH 473
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + L + + VR WD G+ H E + S + D + + S +ND+++ +W+
Sbjct: 474 DSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Query: 347 LGGKELE 353
+ + L+
Sbjct: 534 IEARSLQ 540
Score = 166 (63.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 54/210 (25%), Positives = 97/210 (46%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLEV 368
CL E ++S + D + + S ++D+++ +W+ L+ +G L S +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRS--VI 345
Query: 369 TSDGKQIITMCKESALLLLDR-EAKVERYIEEDQT-ITSFSLSRDNKFLLVNLLNQEIHL 426
S +++ +S + + D ++ +E + + S S D++ L + + +
Sbjct: 346 FSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKI 405
Query: 427 WNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG 486
W+ G L +GH R +RS + +AS S+DS V IW + L L G
Sbjct: 406 WDT-GTGSLQHTLEGH---RDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEG 461
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
H V V ++ + +LASASDDRT+RIW
Sbjct: 462 HRDWVRSVIFSH-DSRLLASASDDRTVRIW 490
Score = 158 (60.7 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 33/89 (37%), Positives = 54/89 (60%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH D V + FSH+ + LAS+S+DR+ IW+ + G + KH L GH V+ VS+S
Sbjct: 459 LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTE-KG--SHKHTLEGHSSLVTSVSFSH 515
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYE 315
D + L + ++ VR WD+ + + H ++
Sbjct: 516 DSRLLASASNDQTVRIWDIEARSLQHTFD 544
>UNIPROTKB|Q5TAQ9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567 EMBL:CH471121
GO:GO:0080008 EMBL:U06631 EMBL:AK223475 EMBL:CR749801 EMBL:AL139011
EMBL:BC013107 EMBL:BC080597 EMBL:BC098271 EMBL:BC099709
EMBL:BC099846 EMBL:BC111063 IPI:IPI00290071 IPI:IPI00854775
RefSeq:NP_056541.2 UniGene:Hs.632447 PDB:3I8E PDBsum:3I8E
ProteinModelPortal:Q5TAQ9 SMR:Q5TAQ9 DIP:DIP-48762N IntAct:Q5TAQ9
MINT:MINT-1446617 STRING:Q5TAQ9 PhosphoSite:Q5TAQ9 DMDM:74756455
PaxDb:Q5TAQ9 PRIDE:Q5TAQ9 Ensembl:ENST00000326837
Ensembl:ENST00000368073 Ensembl:ENST00000368074 GeneID:50717
KEGG:hsa:50717 UCSC:uc001fvn.2 UCSC:uc001fvp.4 CTD:50717
GeneCards:GC01M160185 H-InvDB:HIX0200230 HGNC:HGNC:24891
HPA:HPA027218 HPA:HPA027381 neXtProt:NX_Q5TAQ9 PharmGKB:PA165751195
HOVERGEN:HBG053807 InParanoid:Q5TAQ9 KO:K11804 OrthoDB:EOG47H5PN
PhylomeDB:Q5TAQ9 ChiTaRS:DCAF8 EvolutionaryTrace:Q5TAQ9
GenomeRNAi:50717 NextBio:53224 ArrayExpress:Q5TAQ9 Bgee:Q5TAQ9
CleanEx:HS_WDR42A Genevestigator:Q5TAQ9 Uniprot:Q5TAQ9
Length = 597
Score = 168 (64.2 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGG 455
E IT S D LL + +++I+L+N + V +YKGH+ + V F G
Sbjct: 385 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYG 444
Query: 456 LEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIR 514
+ F+ SGS+ +++W ++SC +I + G G V NC+ +P P +LA++ D ++
Sbjct: 445 PKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVK 503
Query: 515 IW 516
IW
Sbjct: 504 IW 505
Score = 93 (37.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW-- 284
L+GHT V L F+ G +LAS S+D ++W+ V L + SGH+ V +
Sbjct: 189 LEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV-LDFE-SGHKSNVFQAKFLP 246
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNC 310
+S D L C + VR ++S+ C
Sbjct: 247 NSGDSTLAMCARDGQVRVAELSATQC 272
Score = 48 (22.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 332 WIFSGANDKSICMWELGGKE--LECWKGQRTLKISDLEVTSDGKQIITMC 379
W+ SG++D + +W+ ++ L+ G ++ + + G + MC
Sbjct: 207 WLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMC 256
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 213 (80.0 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 74/304 (24%), Positives = 136/304 (44%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+GH D V G + S S+D + +W G L+ L GH V W
Sbjct: 254 KVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV----W 305
Query: 285 SSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS D +++ + ++ W+ +G C+H V C H K + SG+ D ++
Sbjct: 306 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRDATL 363
Query: 343 CMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+W++ G+ L G ++ + V DG+++++ + + + D E + + +
Sbjct: 364 RVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 419
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE--Q 458
T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 420 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGMELKD 471
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T+++
Sbjct: 472 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKL 528
Query: 516 WGLK 519
W LK
Sbjct: 529 WDLK 532
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 65/281 (23%), Positives = 128/281 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 289 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 343
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 344 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 399
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 400 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 456
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ + + +G + + + +C
Sbjct: 457 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTG-QCLQTLQGPNKHQSAV-TCLQ-F 512
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSW 496
+ F+ + S+D V +W + + I L SG V W
Sbjct: 513 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 553
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 210 (79.0 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 71/306 (23%), Positives = 145/306 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
QGH V + +S +GK LAS + ++W D + G + L+GH K ++ +SW
Sbjct: 104 QGHRHWVLSISWSPDGKTLASGCKNGQILLW--DPSTGKQVGRVLAGHSKWITGLSWEPL 161
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ + + + + + +VR WD ++G C + + W D ++S + D++I
Sbjct: 162 HANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTI 220
Query: 343 CMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+W L C RTL+ ++ + +++D + T E A ++ + ++ +
Sbjct: 221 KVWRAHDGVL-C----RTLQGHGHWVNTMALSTD-YALRTGAFEPAEASINAQ-DLQGSL 273
Query: 398 EE--DQTITSFSLSRDN--KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+E D+ + ++L R + L+ + + +W+ + K +A+ GH+ +I
Sbjct: 274 QELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQA---LINQVL 330
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ IAS S D + +W + + +L GH AV ++W+ A+ +L S S D T+
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTL 389
Query: 514 RIWGLK 519
++W +K
Sbjct: 390 KVWDVK 395
Score = 197 (74.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 77/305 (25%), Positives = 129/305 (42%)
Query: 225 QILQGHTDEVWFLQFS--HNG---KYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
++L GH+ + L + H +Y+ASSS D S +W D G + L+GH + V
Sbjct: 144 RVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVW--DTTAG-RCERILTGHTQSV 200
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD---RKWIFSG 336
+C+ W D L + + ++ W G + G + + D R F
Sbjct: 201 TCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEP 259
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK---- 392
A + SI +L G L+ K R L+ +L V G + + + L + A+
Sbjct: 260 A-EASINAQDLQGS-LQELK-DRALRRYNL-VRGQGPERLVSGSDDFTLFMWSPAEDKKP 315
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV-KLVAKYKGHKRSRFVIRS 451
+ R I S D++ + ++ I LW +G K +A +GH + + I
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLW--DGRTGKYLASLRGHVAAVYQIA- 372
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
+ + SGS DS + +W + L LPGH+ V V W+P + +AS D+
Sbjct: 373 --WSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQRVASGGKDK 429
Query: 512 TIRIW 516
+RIW
Sbjct: 430 CLRIW 434
Score = 193 (73.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 75/319 (23%), Positives = 139/319 (43%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GH++ V + FS GKYLAS S D + W++ T
Sbjct: 42 IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 98
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL-HVYEKAGLGLVSCGW 326
GH+ V +SWS D + L + + WD S+G + V + W
Sbjct: 99 PHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSW 158
Query: 327 ---H--PDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
H P+ +++ S + D S+ +W+ E T ++ L DG
Sbjct: 159 EPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDR 218
Query: 382 SALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQE--IHLWNIEGEVKLVAK 438
+ + + + R ++ + + +LS D E I+ +++G ++ + K
Sbjct: 219 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQEL-K 277
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSWN 497
+ +R V R G E+ + SGS+D +++W A + + GH +N V ++
Sbjct: 278 DRALRRYNLV-RG--QGPER--LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFS 332
Query: 498 PANPHMLASASDDRTIRIW 516
P + ++ASAS D++I++W
Sbjct: 333 P-DSRIIASASFDKSIKLW 350
Score = 156 (60.0 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 76/290 (26%), Positives = 131/290 (45%)
Query: 196 CMFHNSSDRDMSLYT-DHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRS 254
C + SS +D S+ D GR + +IL GHT V L++ +G L S+S DR+
Sbjct: 167 CRYMASSSKDGSVRVWDTTAGRCE------RILTGHTQSVTCLRWGGDG-LLYSASQDRT 219
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCL 311
+W + GV L L GH V+ ++ S+D L T E A + D+ G+
Sbjct: 220 IKVWRA--HDGV-LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASINAQDLQ-GSLQ 274
Query: 312 HVYEKA--GLGLVSCGWHPDRKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLE 367
+ ++A LV G P+R + SG++D ++ MW K L G + L I+ +
Sbjct: 275 ELKDRALRRYNLVR-GQGPER--LVSGSDDFTLFMWSPAEDKKPLARMTGHQAL-INQVL 330
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEED-QTITSFSLSRDNKFLLVNLLNQEIH 425
+ D + I + + ++ L D R K + + + S D++ L+ + +
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 390
Query: 426 LWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+W+++ + KL A GH + + G +ASG +D + IW R
Sbjct: 391 VWDVKAQ-KLAADLPGHADEVYAVDWSPDGQR---VASGGKDKCLRIWRR 436
Score = 132 (51.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR--SRFVIRSCFGGLEQAF 460
+ S S S D K L N +I LW+ ++ GH + + E +
Sbjct: 110 VLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRY 169
Query: 461 IASGSEDSQVYIWHRAS--CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
+AS S+D V +W + C+ I L GH+ +V C+ W +L SAS DRTI++W
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERI--LTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 225
Query: 519 KDLNVKRKDCHSNGVHYCN 537
D V + +G H+ N
Sbjct: 226 HD-GVLCRTLQGHG-HWVN 242
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 210 (79.0 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 141 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGDRRCLRTFIGHSK 198
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 199 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 258
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 259 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 318
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 319 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 378
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 379 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 437
Query: 511 RTIRIW 516
I++W
Sbjct: 438 GLIKLW 443
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 213 (80.0 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 74/304 (24%), Positives = 136/304 (44%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+GH D V G + S S+D + +W G L+ L GH V W
Sbjct: 294 KVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV----W 345
Query: 285 SSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS D +++ + ++ W+ +G C+H V C H K + SG+ D ++
Sbjct: 346 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRDATL 403
Query: 343 CMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+W++ G+ L G ++ + V DG+++++ + + + D E + + +
Sbjct: 404 RVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 459
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE--Q 458
T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 460 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGMELKD 511
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T+++
Sbjct: 512 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKL 568
Query: 516 WGLK 519
W LK
Sbjct: 569 WDLK 572
Score = 189 (71.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 65/281 (23%), Positives = 128/281 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 329 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 383
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 384 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 439
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 440 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 496
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ + + +G + + + +C
Sbjct: 497 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTG-QCLQTLQGPNKHQSAV-TCLQ-F 552
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSW 496
+ F+ + S+D V +W + + I L SG V W
Sbjct: 553 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 593
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 213 (80.0 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 74/304 (24%), Positives = 136/304 (44%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+GH D V G + S S+D + +W G L+ L GH V W
Sbjct: 296 KVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV----W 347
Query: 285 SSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS D +++ + ++ W+ +G C+H V C H K + SG+ D ++
Sbjct: 348 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRDATL 405
Query: 343 CMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+W++ G+ L G ++ + V DG+++++ + + + D E + + +
Sbjct: 406 RVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 461
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE--Q 458
T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 462 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGMELKD 513
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T+++
Sbjct: 514 NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNK---NFVITSSDDGTVKL 570
Query: 516 WGLK 519
W LK
Sbjct: 571 WDLK 574
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 65/281 (23%), Positives = 128/281 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 331 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 385
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 386 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 441
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 442 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 498
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ + + +G + + + +C
Sbjct: 499 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTG-QCLQTLQGPSKHQSAV-TCLQ-F 554
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSW 496
+ F+ + S+D V +W + + I L SG V W
Sbjct: 555 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 595
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 210 (79.0 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 144 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGDRRCLRTFIGHSK 201
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 202 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 261
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 262 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 321
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 322 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 381
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 382 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 440
Query: 511 RTIRIW 516
I++W
Sbjct: 441 GLIKLW 446
>MGI|MGI:91860 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:91860 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN ChiTaRS:DCAF8
EMBL:AK098114 EMBL:AK146825 EMBL:BC023704 EMBL:BC023804
IPI:IPI00229856 IPI:IPI00407739 RefSeq:NP_705783.1
UniGene:Mm.159915 ProteinModelPortal:Q8N7N5 SMR:Q8N7N5
PhosphoSite:Q8N7N5 PaxDb:Q8N7N5 PRIDE:Q8N7N5
Ensembl:ENSMUST00000074144 GeneID:98193 KEGG:mmu:98193
UCSC:uc007dpr.2 UCSC:uc007dps.2 HOGENOM:HOG000243561
InParanoid:Q8N7N5 OMA:EQPRRRV NextBio:353348 Bgee:Q8N7N5
CleanEx:MM_WDR42A Genevestigator:Q8N7N5 Uniprot:Q8N7N5
Length = 591
Score = 167 (63.8 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGG 455
E IT S D LL + +++I+L+N + + +YKGH+ + V F G
Sbjct: 379 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYG 438
Query: 456 LEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIR 514
+ F+ SGS+ +++W ++SC +I + G G V NC+ +P P +LA++ D ++
Sbjct: 439 PKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVK 497
Query: 515 IW 516
IW
Sbjct: 498 IW 499
Score = 93 (37.8 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW-- 284
L+GHT V L F+ G +LAS S+D ++W+ V L + SGH+ V +
Sbjct: 183 LEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV-LDFE-SGHKSNVFQAKFLP 240
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNC 310
+S D L C + VR ++S+ C
Sbjct: 241 NSGDSTLAMCARDGQVRVAELSATQC 266
Score = 48 (22.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 332 WIFSGANDKSICMWELGGKE--LECWKGQRTLKISDLEVTSDGKQIITMC 379
W+ SG++D + +W+ ++ L+ G ++ + + G + MC
Sbjct: 201 WLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMC 250
>RGD|1308513 [details] [associations]
symbol:Dcaf8 "DDB1 and CUL4 associated factor 8" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1308513 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0016567
GO:GO:0080008 GeneTree:ENSGT00530000062951 CTD:50717
HOVERGEN:HBG053807 KO:K11804 OrthoDB:EOG47H5PN HOGENOM:HOG000243561
OMA:EQPRRRV EMBL:BC085957 IPI:IPI00192480 RefSeq:NP_001014253.1
UniGene:Rn.203073 ProteinModelPortal:Q5U2M6 PhosphoSite:Q5U2M6
PRIDE:Q5U2M6 Ensembl:ENSRNOT00000008944 GeneID:364050
KEGG:rno:364050 UCSC:RGD:1308513 InParanoid:Q5U2M6 NextBio:684737
Genevestigator:Q5U2M6 Uniprot:Q5U2M6
Length = 591
Score = 167 (63.8 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGG 455
E IT S D LL + +++I+L+N + + +YKGH+ + V F G
Sbjct: 379 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYIKRYKGHRNNATVKGVNFYG 438
Query: 456 LEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIR 514
+ F+ SGS+ +++W ++SC +I + G G V NC+ +P P +LA++ D ++
Sbjct: 439 PKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVK 497
Query: 515 IW 516
IW
Sbjct: 498 IW 499
Score = 93 (37.8 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW-- 284
L+GHT V L F+ G +LAS S+D ++W+ V L + SGH+ V +
Sbjct: 183 LEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV-LDFE-SGHKSNVFQAKFLP 240
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNC 310
+S D L C + VR ++S+ C
Sbjct: 241 NSGDSTLAMCARDGQVRVAELSATQC 266
Score = 48 (22.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 332 WIFSGANDKSICMWELGGKE--LECWKGQRTLKISDLEVTSDGKQIITMC 379
W+ SG++D + +W+ ++ L+ G ++ + + G + MC
Sbjct: 201 WLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMC 250
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 212 (79.7 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 80/309 (25%), Positives = 142/309 (45%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP---VSCVSWSS 286
H V ++FS +GKYLA+ N RSA I++V L V + S + + V +S
Sbjct: 268 HDSVVCCVRFSRDGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSP 326
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + L T ++ +R WD+++ H++ + S + + ++I SG+ DK++ +W+
Sbjct: 327 DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWD 386
Query: 347 LGGKELECWKGQRTLKISD----LEVTSDGKQIITMCKESALLLLDREAK--VERYIEED 400
+ +L TL I D + ++ DG + + + + D VER D
Sbjct: 387 IAEGKLVY-----TLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPD 441
Query: 401 ---QTITSFSLSRDNKFLLVNLLNQEIHLW---------NIEGEV-KLVAKYKGHKRSRF 447
++ S + + + K L+ L++ I LW N G+ K ++GHK F
Sbjct: 442 GHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKD--F 499
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
V+ C + ++ SGS+D V W + + L GH +V V+ +P ++ A+
Sbjct: 500 VLSVCLTP-DGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTG-NLFATG 557
Query: 508 SDDRTIRIW 516
S D RIW
Sbjct: 558 SGDMRARIW 566
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/186 (27%), Positives = 95/186 (51%)
Query: 219 IPSRTLQ-ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
I +RT++ I GH +++ L F+ NG+Y+AS S D++ +W++ G L + LS +
Sbjct: 345 IATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDI-AEG--KLVYTLS-IED 400
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA-GL--GLVSCGWHPDRKWIF 334
V+ V+ S D + +++ VR WD ++G + E G + S + P+ K +
Sbjct: 401 GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELV 460
Query: 335 SGANDKSICMWEL------------GGKELECWKGQRTLKISDLEVTSDGKQIITMCKES 382
SG+ DK+I +WEL GGK ++G + +S + +T DG +++ K+
Sbjct: 461 SGSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLS-VCLTPDGHWVMSGSKDR 519
Query: 383 ALLLLD 388
+ D
Sbjct: 520 GVQFWD 525
Score = 139 (54.0 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 56/215 (26%), Positives = 103/215 (47%)
Query: 329 DRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTS-----DGKQIITMCKES 382
D K++ +G N +S ++++ G+ + + + K DL + S DGK + T ++
Sbjct: 280 DGKYLATGCN-RSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDK 338
Query: 383 ALLLLDREAKVERYI--EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYK 440
+ + D + ++I +Q I S + + +++ ++ + LW+I E KLV
Sbjct: 339 QIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDI-AEGKLVYTLS 397
Query: 441 GHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL--P-GHSGAVNCVSWN 497
V S G ++A+GS D V +W + L+ L P GH +V V++
Sbjct: 398 IEDGVTTVAMSPDG----LYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFA 453
Query: 498 PANPHMLASASDDRTIRIWGLKDLNVKRKDCHSNG 532
P N L S S D+TI++W +LN+ R+ +S G
Sbjct: 454 P-NGKELVSGSLDKTIKLW---ELNLPRQQYNSAG 484
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 32/134 (23%), Positives = 65/134 (48%)
Query: 390 EAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GE-VKLVAKYKGHKRSRF 447
+ ++ ++ D + SRD K+L N+ ++++ G+ V ++ K
Sbjct: 259 DVELVHHLVHDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVAVLQDESVDKSGDL 317
Query: 448 VIRS-CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLAS 506
IRS CF + ++A+G+ED Q+ +W A+ + GH + + + N +AS
Sbjct: 318 YIRSVCFSP-DGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDF-AGNGRYIAS 375
Query: 507 ASDDRTIRIWGLKD 520
S D+T+R+W + +
Sbjct: 376 GSGDKTVRLWDIAE 389
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 213 (80.0 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 74/304 (24%), Positives = 136/304 (44%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+GH D V G + S S+D + +W G L+ L GH V W
Sbjct: 374 KVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV----W 425
Query: 285 SSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS D +++ + ++ W+ +G C+H V C H K + SG+ D ++
Sbjct: 426 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRDATL 483
Query: 343 CMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+W++ G+ L G ++ + V DG+++++ + + + D E + + +
Sbjct: 484 RVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 539
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE--Q 458
T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 540 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGMELKD 591
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T+++
Sbjct: 592 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKL 648
Query: 516 WGLK 519
W LK
Sbjct: 649 WDLK 652
Score = 189 (71.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 65/281 (23%), Positives = 128/281 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 409 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 463
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 464 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 519
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 520 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 576
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ + + +G + + + +C
Sbjct: 577 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTG-QCLQTLQGPNKHQSAV-TCLQ-F 632
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSW 496
+ F+ + S+D V +W + + I L SG V W
Sbjct: 633 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 673
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 213 (80.0 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 74/304 (24%), Positives = 136/304 (44%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+GH D V G + S S+D + +W G L+ L GH V W
Sbjct: 379 KVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV----W 430
Query: 285 SSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS D +++ + ++ W+ +G C+H V C H K + SG+ D ++
Sbjct: 431 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRDATL 488
Query: 343 CMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+W++ G+ L G ++ + V DG+++++ + + + D E + + +
Sbjct: 489 RVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 544
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE--Q 458
T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 545 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGMELKD 596
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T+++
Sbjct: 597 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKL 653
Query: 516 WGLK 519
W LK
Sbjct: 654 WDLK 657
Score = 189 (71.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 65/281 (23%), Positives = 128/281 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 414 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 468
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 469 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 524
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 525 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 581
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ + + +G + + + +C
Sbjct: 582 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTG-QCLQTLQGPNKHQSAV-TCLQ-F 637
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSW 496
+ F+ + S+D V +W + + I L SG V W
Sbjct: 638 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVW 678
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 210 (79.0 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 72/306 (23%), Positives = 145/306 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
QGH V + +S +GK LAS + ++W D + G + L+GH K ++ +SW
Sbjct: 153 QGHRHWVLSISWSPDGKKLASGCKNGQILLW--DPSTGKQVGRALAGHSKWITALSWEPL 210
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ + + + + + +VR WD ++G C + + W D ++S + D++I
Sbjct: 211 HANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTI 269
Query: 343 CMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+W L C RTL+ ++ + +++D + T E A ++ + + +
Sbjct: 270 KVWRAHDGVL-C----RTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQ-DLRGSL 322
Query: 398 EE--DQTITSFSLSRDNKF-LLVNLLNQ-EIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+E ++ ++ ++L R LV+ + + LW+ + K +A+ GH+ +I
Sbjct: 323 QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA---LINQVL 379
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ IAS S D + +W + + +L GH AV ++W+ A+ +L S S D T+
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTL 438
Query: 514 RIWGLK 519
++W +K
Sbjct: 439 KVWDVK 444
Score = 203 (76.5 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 74/320 (23%), Positives = 141/320 (44%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GH++ V + FS GKYLAS S D + W++ T
Sbjct: 91 IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 147
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL-HVYEKAGLGLVSCGW 326
GH+ V +SWS D ++L + + WD S+G + + + W
Sbjct: 148 PHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSW 207
Query: 327 ---H--PDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
H P+ +++ S + D S+ +W+ E T ++ L DG
Sbjct: 208 EPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDR 267
Query: 382 SALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQE--IHLWNIEGEVKLVAK 438
+ + + + R ++ + + +LS D E ++ ++ G ++ +
Sbjct: 268 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQ---E 324
Query: 439 YKGHKRSRF-VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSW 496
K SR+ ++R GLE+ + SGS+D +++W A + + GH +N V +
Sbjct: 325 LKERALSRYNLVRG--RGLER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 380
Query: 497 NPANPHMLASASDDRTIRIW 516
+P + ++ASAS D++I++W
Sbjct: 381 SP-DSRIIASASFDKSIKLW 399
Score = 193 (73.0 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 81/313 (25%), Positives = 134/313 (42%)
Query: 220 PSRTLQI---LQGHTDEVWFLQFS--HNG---KYLASSSNDRSAIIWEVDLNGGVTLKHK 271
PS Q+ L GH+ + L + H +Y+ASSS D S +W D G +
Sbjct: 185 PSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW--DTTAG-RCERI 241
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD-- 329
L+GH + V+C+ W D L + + ++ W G + G + + D
Sbjct: 242 LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Query: 330 -RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDG-KQIITMCKESALLLL 387
R F A + S+ +L G L+ K +R L +L V G +++++ + L L
Sbjct: 301 LRTGAFEPA-EASVNAQDLRGS-LQELK-ERALSRYNL-VRGRGLERLVSGSDDFTLFLW 356
Query: 388 D-REAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV-KLVAKYKGHK 443
E K + R I S D++ + ++ I LW +G K +A +GH
Sbjct: 357 SPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW--DGRTGKYLASLRGHV 414
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
+ + I + + SGS DS + +W + L LPGH+ V V W+P +
Sbjct: 415 AAVYQIA---WSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP-DGQR 470
Query: 504 LASASDDRTIRIW 516
+AS D+ +RIW
Sbjct: 471 VASGGKDKCLRIW 483
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 76/290 (26%), Positives = 130/290 (44%)
Query: 196 CMFHNSSDRDMSLYT-DHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRS 254
C + SS +D S+ D GR + +IL GHT V L++ +G L S+S DR+
Sbjct: 216 CRYVASSSKDGSVRVWDTTAGRCE------RILTGHTQSVTCLRWGGDG-LLYSASQDRT 268
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCL 311
+W + GV L L GH V+ ++ S+D L T E A V D+ G+
Sbjct: 269 IKVWRA--HDGV-LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLR-GSLQ 323
Query: 312 HVYEKA--GLGLVSCGWHPDRKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLE 367
+ E+A LV G +R + SG++D ++ +W K L G + L I+ +
Sbjct: 324 ELKERALSRYNLVR-GRGLER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQAL-INQVL 379
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEED-QTITSFSLSRDNKFLLVNLLNQEIH 425
+ D + I + + ++ L D R K + + + S D++ L+ + +
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 426 LWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+W+++ + KL A GH + + G +ASG +D + IW R
Sbjct: 440 VWDVKAQ-KLAADLPGHADEVYAVDWSPDGQR---VASGGKDKCLRIWRR 485
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR--SRFVIRSCFGGLEQAF 460
+ S S S D K L N +I LW+ ++ GH + + E +
Sbjct: 159 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRY 218
Query: 461 IASGSEDSQVYIWHRAS--CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
+AS S+D V +W + C+ I L GH+ +V C+ W +L SAS DRTI++W
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERI--LTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 274
Query: 519 KDLNVKRKDCHSNGVHYCN 537
D V + +G H+ N
Sbjct: 275 HD-GVLCRTLQGHG-HWVN 291
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 164 (62.8 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH V + +S GKYLAS+S D + IW+ L L GH+ V CV+W+
Sbjct: 59 GHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLT-VLEGHENEVKCVAWAPSG 117
Query: 289 QQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
L TC +++V W+V + CL V + WHP ++ + S + D IC++
Sbjct: 118 SLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIY 177
Query: 346 ELGGKELEC---WKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA 391
+ + EC +G + + L +G+++ + C + + + +E+
Sbjct: 178 KEEDDDWECRATLEGHEST-VWSLTFDPEGRRLAS-CSDDRTVKIWKES 224
Score = 127 (49.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 48/180 (26%), Positives = 77/180 (42%)
Query: 227 LQGHTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCVSW 284
+ H D W++ ++ G LA+ DR+ IW + K LS GHQ+ V V+W
Sbjct: 11 VSAHPDSRCWYVAWNPAGTTLATCGGDRAIRIWGKE-GDSWECKCVLSDGHQRTVRKVAW 69
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKS 341
S + L + + W + + CL V E V C W P + + + DKS
Sbjct: 70 SPCGKYLASASFDATTCIWKKTDEDFECLTVLE-GHENEVKCVAWAPSGSLLATCSRDKS 128
Query: 342 ICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+ +WE+ + E EC L + + T D K ++ + L + K+ Y EED
Sbjct: 129 VWIWEVDEEDEYEC------LSVVNSH-TQDVKHVVWHPTQELLASASYDNKICIYKEED 181
Score = 120 (47.3 bits), Expect = 0.00025, P = 0.00025
Identities = 64/280 (22%), Positives = 118/280 (42%)
Query: 262 LNGGVTLKHKLSGHQKPVS-C--VSWSSDDQQLLTCGVEEAVRRW--DVSSGNCLHVYEK 316
+ G + L+H++S H P S C V+W+ L TCG + A+R W + S C V
Sbjct: 1 MKGALELQHRVSAH--PDSRCWYVAWNPAGTTLATCGGDRAIRIWGKEGDSWECKCVLSD 58
Query: 317 AGLGLV-SCGWHPDRKWIFSGANDKSICMWELGGKELECW---KGQRTLKISDLEVTSDG 372
V W P K++ S + D + C+W+ ++ EC +G ++ + G
Sbjct: 59 GHQRTVRKVAWSPCGKYLASASFDATTCIWKKTDEDFECLTVLEGHEN-EVKCVAWAPSG 117
Query: 373 KQIITMCKESALLL--LDREAKVE--RYIEEDQTITSFSLSRDNKFLLVNL-LNQEIHLW 427
+ T ++ ++ + +D E + E + + + LL + + +I ++
Sbjct: 118 SLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICIY 177
Query: 428 NIEGEV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRA-----SCD-- 479
E + + A +GH+ + + S E +AS S+D V IW + S D
Sbjct: 178 KEEDDDWECRATLEGHEST---VWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDES 234
Query: 480 --LIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
I L G H + ++W LA+A D +R++
Sbjct: 235 WKCICTLSGFHGRTIYDIAWCRLTG-ALATACGDDGVRVF 273
Score = 118 (46.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/139 (24%), Positives = 64/139 (46%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L +L+GH +EV + ++ +G LA+ S D+S IWEVD ++ H + V V
Sbjct: 98 LTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVV 157
Query: 284 WSSDDQQLLTCGVEE--AVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
W + L + + + + + C E + S + P+ + + S ++D++
Sbjct: 158 WHPTQELLASASYDNKICIYKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRT 217
Query: 342 ICMWE---LG-GKELECWK 356
+ +W+ G G E WK
Sbjct: 218 VKIWKESTTGDGSSDESWK 236
Score = 85 (35.0 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
H+ VNCVSWNP +LA+ SD+ IW
Sbjct: 296 HNQDVNCVSWNPKEAGLLATCSDNGEFAIW 325
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 210 (79.0 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 107/519 (20%), Positives = 220/519 (42%)
Query: 20 IKRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHS-SMVNLFTQQILDGHWDESLATLS 78
I+ + +R+I + L ++ A L+EE+ + L++ ++ F +I G+WD L T+
Sbjct: 6 IESSDVIRLIEQFLKESNLHRTLAILQEETNVSLNTVDSIDGFCNEITSGNWDNVLKTVQ 65
Query: 79 KIGLVDESVVKSASFLILEQKFFELLDAEKVMDALKTLRAEIAPLCIKN-SRVRELXXXX 137
+ L + ++ + E EL++ ++ A R + +K R
Sbjct: 66 SLKLPAKKLID-----LYEHVIIELVELRELATARLVARQTDPMILLKQIDPDRFARLES 120
Query: 138 XXXXXXXXXXXXXQDIVRAKSRXXXXXXXXXXXXXMIMIPERRLEHLVEQALVLQREACM 197
D+ + K R ++ P R L L+ Q+L Q +
Sbjct: 121 LINRPYFDGQEVYGDVSKEKRRSVIAQTLSSEVH--VVAPSRLLS-LLGQSLKWQLHQGL 177
Query: 198 FHNSSDRDMSLYTDHQCGRDQI----PSRTLQILQGHTDEV-WFLQFSHNGKYLASSSND 252
+ D L+ ++QI P+ + ++ T FS + YL S S D
Sbjct: 178 LPPGTAID--LFRGKAAQKEQIEERYPTMMARSIKFSTKSYPESAVFSPDANYLVSGSKD 235
Query: 253 RSAIIWEVDLNGGVT--LKHKLSGH----QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVS 306
+W +NG + LK++ + V C+S+S D + L T ++ ++ W V
Sbjct: 236 GFIEVWNY-MNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVE 294
Query: 307 SGNCLHVYEKAGL-GLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLKIS 364
+G+CL +++A G+ + + D I SG ND + + + GK L+ +G + I+
Sbjct: 295 TGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSY-IT 353
Query: 365 DLEVTSDGKQIITMCKESALLLLDREA----KVERYIEEDQTITS-FSLSRDN--KFLLV 417
D+ + +G II+ + ++ + ++ R ED I + + + + + ++
Sbjct: 354 DVRYSDEGNHIISCSTDGSIRVWHGKSGECLSTFRVGSEDYPILNVIPIPKSDPPQMIVC 413
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
N N +++ NI G+V V KR + +C + + + +ED +Y + S
Sbjct: 414 NRSNT-LYVVNISGQV--VRTMTSGKREKGDFINCILSPKGEWAYAIAEDGVMYCFMVLS 470
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L LP ++ +P + +++AS ++D +++W
Sbjct: 471 GTLETTLPVTERLPIGLAHHP-HQNLIASYAEDGLLKLW 508
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 216 (81.1 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 78/297 (26%), Positives = 130/297 (43%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q S G + S S DR+ +W++D V H L GH
Sbjct: 1023 VNGKCLRTLVGHTGGVWSSQMS--GNIIISGSTDRTLKVWDMDSGACV---HTLQGHTST 1077
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++ + +R WD+ G+CLHV L V C + D K I SGA
Sbjct: 1078 VRCMHLHGS--KVVSGSRDATLRVWDIEQGSCLHVLV-GHLAAVRCVQY-DGKLIVSGAY 1133
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W +E L +G T ++ L+ DG +++ ++++ + D E +
Sbjct: 1134 DYMVKIWHPERQECLHTLQGH-TNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHT 1190
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS R N L+ + + +W+I + + G + + +C
Sbjct: 1191 LMGHQSLTSGMELRQN-ILVSGNADSTVKVWDITTG-QCLQTLSGPNKHHSAV-TCLQ-F 1246
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWN-PANPHMLASASDDR 511
F+ + S+D V +W + D I L SG V W AN L A R
Sbjct: 1247 NSRFVVTSSDDGTVKLWDVKTGDFIRNLVALDSGGSGGVVWRIRANDTKLICAVGSR 1303
Score = 216 (81.1 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 79/309 (25%), Positives = 134/309 (43%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
P R ++L+GH D V +G + S S+D + +W +NG L GH V
Sbjct: 983 PVRKPKVLKGHDDHV-ITCLQFSGNRIVSGSDDNTLKVWSA-VNGKCL--RTLVGHTGGV 1038
Query: 280 SCVSWSSD-DQQLLTCG-VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA 337
WSS ++ G + ++ WD+ SG C+H + V C H + SG+
Sbjct: 1039 ----WSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQ-GHTSTVRC-MHLHGSKVVSGS 1092
Query: 338 NDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERY 396
D ++ +W++ G L G V DGK I++ + + + E + +
Sbjct: 1093 RDATLRVWDIEQGSCLHVLVGHLAAVRC---VQYDGKLIVSGAYDYMVKIWHPERQECLH 1149
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGG 455
+ T +SL D ++ L+ I +W++E G K GH+ S G
Sbjct: 1150 TLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLM--GHQ-------SLTSG 1200
Query: 456 LE--QAFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDD 510
+E Q + SG+ DS V +W + + L G H AV C+ +N + ++SDD
Sbjct: 1201 MELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNS---RFVVTSSDD 1257
Query: 511 RTIRIWGLK 519
T+++W +K
Sbjct: 1258 GTVKLWDVK 1266
>UNIPROTKB|G3V3G9 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9606 "Homo sapiens" [GO:0005777 "peroxisome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006708
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04614 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 EMBL:AL139011 HGNC:HGNC:24891 ChiTaRS:DCAF8
OMA:EQPRRRV Ensembl:ENST00000555195 Ensembl:ENST00000556710
Uniprot:G3V3G9
Length = 751
Score = 168 (64.2 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGG 455
E IT S D LL + +++I+L+N + V +YKGH+ + V F G
Sbjct: 539 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYG 598
Query: 456 LEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIR 514
+ F+ SGS+ +++W ++SC +I + G G V NC+ +P P +LA++ D ++
Sbjct: 599 PKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVK 657
Query: 515 IW 516
IW
Sbjct: 658 IW 659
Score = 93 (37.8 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW-- 284
L+GHT V L F+ G +LAS S+D ++W+ V L + SGH+ V +
Sbjct: 343 LEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV-LDFE-SGHKSNVFQAKFLP 400
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNC 310
+S D L C + VR ++S+ C
Sbjct: 401 NSGDSTLAMCARDGQVRVAELSATQC 426
Score = 48 (22.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 332 WIFSGANDKSICMWELGGKE--LECWKGQRTLKISDLEVTSDGKQIITMC 379
W+ SG++D + +W+ ++ L+ G ++ + + G + MC
Sbjct: 361 WLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSGDSTLAMC 410
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 215 (80.7 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 72/312 (23%), Positives = 144/312 (46%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+++ HTD V+ FS +G+ +AS D++ +++ + G L+ K H+ V C ++S
Sbjct: 612 VVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAE-TGEKLLEIK--AHEDEVLCCAFS 668
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW--HPDRKWIFSGANDKSIC 343
+DD+ + TC V++ V+ W+ +G + +Y++ + C + + + + +G+ND +
Sbjct: 669 ADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLK 728
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCK-ESALLLLD-REAKVERYIEEDQ 401
+W+L +E T +S + D Q++ C + L L D + A + I Q
Sbjct: 729 LWDLNQEECRNTMFGHTNSVSHCRFSPDD-QVLASCSADGTLKLWDVKSANERKSINVKQ 787
Query: 402 TITSFSLSRDNKFLLVNLLN-------------QEIHLWNIEGEVKLVAKYKGHKRSRFV 448
+ +++ ++V + ++ L++I L + GH +
Sbjct: 788 FFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHHSA--- 844
Query: 449 IRSC-FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
++ C F + + S+ V +W S + GH V+CV ++P L S
Sbjct: 845 VQYCDFSPHNHLAVVALSQYC-VELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTS- 902
Query: 508 SDDRTIRIWGLK 519
SDD+TIR+W K
Sbjct: 903 SDDQTIRLWETK 914
Score = 192 (72.6 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 68/298 (22%), Positives = 137/298 (45%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G +SS+D++ +WE V N LK ++ V +
Sbjct: 881 RGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEID--------VVF 932
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + +RR + +GN + + C P +++ G D +I +
Sbjct: 933 QENEVTVLAV---DNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQI 989
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-T 402
EL + + G +T + ++ T+DGK +I+ +SA+ + + +++ +++ Q T
Sbjct: 990 LELLNNRIFQSRNGHKTT-VRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFFLQAHQET 1048
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
+ F L ++++ L + + + +WNI ++ + H+ + + SC + +
Sbjct: 1049 VKDFRLLKNSRLLSWSF-DGTVKVWNIITR-RIEKDFVCHQDT---VLSCDISSDATKFS 1103
Query: 463 SGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
S S D IW + L GH G V C S++ N +LA+ D+ IRIW + +
Sbjct: 1104 STSADKTAKIWSFELLSPLHELRGHKGCVRCSSFS-VNNTLLATGDDNGEIRIWNVSN 1160
Score = 132 (51.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 40/164 (24%), Positives = 80/164 (48%)
Query: 369 TSDGKQIITMCKESALLLLDREAKVERYIE----EDQTITSFSLSRDNKFLLVNLLNQEI 424
+ DG++I + + L + E E+ +E ED+ + + S D+KF+ +++++
Sbjct: 626 SEDGQRIASCGADKTLQVFKAETG-EKLLEIKAHEDEVLCC-AFSADDKFIATCSVDKKV 683
Query: 425 HLWN-IEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQVYIWHRASCDLI 481
+WN + GE LV Y H + C +A+GS D + +W +
Sbjct: 684 KIWNSMTGE--LVRIYDEHSEQ---VNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECR 738
Query: 482 GALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKR 525
+ GH+ +V+ ++P + +LAS S D T+++W +K N ++
Sbjct: 739 NTMFGHTNSVSHCRFSP-DDQVLASCSADGTLKLWDVKSANERK 781
Score = 119 (46.9 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYL--ASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
++I H+++V F++N +L A+ SND +W DLN ++ + GH VS
Sbjct: 694 VRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLW--DLNQE-ECRNTMFGHTNSVSH 750
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
+S DDQ L +C + ++ WDV S N
Sbjct: 751 CRFSPDDQVLASCSADGTLKLWDVKSAN 778
Score = 71 (30.1 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 37/192 (19%), Positives = 88/192 (45%)
Query: 329 DRKWIFSGANDKSICMWELGGKELECWKG-QRTLKISDLEVTSDGKQIITMCKESALLLL 387
D K + S ++D ++ +W ++ + Q T+K D + + + +++ + + +
Sbjct: 1016 DGKTLISSSDDSAVQIWNWQSEDPFFLQAHQETVK--DFRLLKNSR-LLSWSFDGTVKVW 1072
Query: 388 DR-EAKVER-YIEEDQTITSFSLSRD-NKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR 444
+ ++E+ ++ T+ S +S D KF + ++ +W+ E + + + +GHK
Sbjct: 1073 NIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSA-DKTAKIWSFE-LLSPLHELRGHKG 1130
Query: 445 SRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS------CDLIGALPG---HSGAVNCVS 495
+R + +A+G ++ ++ IW+ ++ C I G H G V +
Sbjct: 1131 C---VRCSSFSVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLC 1187
Query: 496 WNPANPHMLASA 507
++P + ML SA
Sbjct: 1188 FSP-DTKMLVSA 1198
Score = 62 (26.9 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/122 (21%), Positives = 53/122 (43%)
Query: 402 TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
T+ + D K L+ + + + +WN + E + H+ + ++ F L+ + +
Sbjct: 1007 TVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFFLQ--AHQET---VKD-FRLLKNSRL 1060
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIRIWGLKD 520
S S D V +W+ + + H V +C + A +S S D+T +IW +
Sbjct: 1061 LSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATK--FSSTSADKTAKIWSFEL 1118
Query: 521 LN 522
L+
Sbjct: 1119 LS 1120
>TAIR|locus:2172084 [details] [associations]
symbol:AT5G54520 "AT5G54520" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0048573 "photoperiodism, flowering" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0080008 IPI:IPI00547624 RefSeq:NP_200263.2
UniGene:At.29492 ProteinModelPortal:F4K0D3 SMR:F4K0D3 PRIDE:F4K0D3
EnsemblPlants:AT5G54520.1 GeneID:835540 KEGG:ath:AT5G54520
OMA:PPFKLNK Uniprot:F4K0D3
Length = 457
Score = 208 (78.3 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 85/307 (27%), Positives = 141/307 (45%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYL-ASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
++PSR L GHT V + +S + +L AS+ D + +W V N ++ L H
Sbjct: 147 EMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLH-HN 205
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY-EKAGLGLVSCGWHPDRKWIF- 334
PV V WS LL+CG + R +DV G + E +G+V +HPD +F
Sbjct: 206 APVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVK--FHPDNCNVFL 263
Query: 335 SGANDKSICMWELGGKELECWKGQRTL-KISDLEVTSDGKQIITMC-------KESALLL 386
SG + S+ +W++ + + R L I D+E + GKQ I+ E+A+++
Sbjct: 264 SGGSKGSLRLWDIRANKF-VHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIV 322
Query: 387 LD--REAKVER--YIEEDQTITSFSLSRDNKFLLVNLLNQE-IHLWNIEGEVKLVAKYKG 441
D RE + Y+E +D F+ + N I N ++ +++G
Sbjct: 323 WDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEG 382
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H + F I+ F + +ASGS D VY++ S LI L + VS++P P
Sbjct: 383 HWVAGFPIKCNFSP-DGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLP 441
Query: 502 HMLASAS 508
+++A+ S
Sbjct: 442 NVVAACS 448
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 210 (79.0 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGDRRCLRTFIGHSK 333
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 394 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 453
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 454 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 513
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 514 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Query: 511 RTIRIW 516
I++W
Sbjct: 573 GLIKLW 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 210 (79.0 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGDRRCLRTFIGHSK 333
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 394 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 453
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 454 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 513
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 514 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Query: 511 RTIRIW 516
I++W
Sbjct: 573 GLIKLW 578
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 210 (79.0 bits), Expect = 8.2e-14, P = 8.2e-14
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGDRRCLRTFIGHSK 333
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 394 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 453
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 454 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 513
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 514 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Query: 511 RTIRIW 516
I++W
Sbjct: 573 GLIKLW 578
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 208 (78.3 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 77/320 (24%), Positives = 142/320 (44%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GH++ V + FS GKYLAS S D + W++ T
Sbjct: 91 IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 147
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG----NCLHVYEK--AGLGL 321
GH+ V +SWS D ++L + V WD S+G L + K GL
Sbjct: 148 PHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSW 207
Query: 322 VSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
+P+ +++ S + D S+ +W+ E T ++ L DG
Sbjct: 208 EPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDR 267
Query: 382 SALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQE--IHLWNIEGEVKLVAK 438
+ + + + R ++ + + +LS D E ++ +++G +K +
Sbjct: 268 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLK---E 324
Query: 439 YKGHKRSRF-VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSW 496
K SR+ ++R G E+ + SGS+D +++W A + + GH +N V +
Sbjct: 325 LKERASSRYNLVRG--QGPER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 380
Query: 497 NPANPHMLASASDDRTIRIW 516
+P + ++ASAS D++I++W
Sbjct: 381 SP-DSRIVASASFDKSIKLW 399
Score = 204 (76.9 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 69/306 (22%), Positives = 146/306 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
+GH V + +S +GK LAS + ++W D + G+ + L+GH K ++ +SW
Sbjct: 153 KGHRHWVLSISWSPDGKKLASGCKNGQVLLW--DPSTGLQVGRTLTGHSKWITGLSWEPL 210
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ + + + + + +VR WD ++G C + + W D ++S + D++I
Sbjct: 211 HMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTI 269
Query: 343 CMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+W L C RTL+ ++ + +++D + T E A ++ + ++ +
Sbjct: 270 KVWRAHDGVL-C----RTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQ-DLQGSL 322
Query: 398 EE--DQTITSFSLSRDN--KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+E ++ + ++L R + L+ + + LW+ + K +A+ GH+ +I
Sbjct: 323 KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA---LINQVL 379
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ +AS S D + +W + + +L GH AV ++W+ A+ +L S S D T+
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTL 438
Query: 514 RIWGLK 519
++W +K
Sbjct: 439 KVWDVK 444
Score = 192 (72.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 80/315 (25%), Positives = 132/315 (41%)
Query: 220 PSRTLQI---LQGHTDEV----WF-LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHK 271
PS LQ+ L GH+ + W L + +Y+ASSS D S +W D G +
Sbjct: 185 PSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW--DTTAG-RCERI 241
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD-- 329
L+GH + V+C+ W D L + + ++ W G + G + + D
Sbjct: 242 LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 300
Query: 330 -RKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
R F A + ++ +L G KEL+ +R +L V G + + + L
Sbjct: 301 LRTGAFEPA-EATVNAQDLQGSLKELK----ERASSRYNL-VRGQGPERLVSGSDDFTLF 354
Query: 387 LDREAK----VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV-KLVAKYKG 441
L A+ + R I S D++ + ++ I LW +G K +A +G
Sbjct: 355 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW--DGRTGKYLASLRG 412
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H + + I + + SGS DS + +W + L LPGH+ V V W+P +
Sbjct: 413 HVAAVYQIA---WSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSP-DG 468
Query: 502 HMLASASDDRTIRIW 516
+AS D+ +RIW
Sbjct: 469 QRVASGGKDKCLRIW 483
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 75/290 (25%), Positives = 130/290 (44%)
Query: 196 CMFHNSSDRDMSLYT-DHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRS 254
C + SS +D S+ D GR + +IL GHT V L++ +G L S+S DR+
Sbjct: 216 CRYVASSSKDGSVRVWDTTAGRCE------RILTGHTQSVTCLRWGGDG-LLYSASQDRT 268
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCL 311
+W + GV L L GH V+ ++ S+D L T E A V D+ G+
Sbjct: 269 IKVWRA--HDGV-LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDLQ-GSLK 323
Query: 312 HVYEKAG--LGLVSCGWHPDRKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLE 367
+ E+A LV G P+R + SG++D ++ +W K L G + L I+ +
Sbjct: 324 ELKERASSRYNLVR-GQGPER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQAL-INQVL 379
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEED-QTITSFSLSRDNKFLLVNLLNQEIH 425
+ D + + + + ++ L D R K + + + S D++ L+ + +
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 426 LWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+W+++ + KL GH + + G +ASG +D + IW R
Sbjct: 440 VWDVKAQ-KLATDLPGHADEVYAVDWSPDGQR---VASGGKDKCLRIWRR 485
Score = 136 (52.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 42/141 (29%), Positives = 68/141 (48%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL----EQ 458
+ S S S D K L N ++ LW+ +++ GH S+++ + L E
Sbjct: 159 VLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGH--SKWITGLSWEPLHMNPEC 216
Query: 459 AFIASGSEDSQVYIWHRAS--CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
++AS S+D V +W + C+ I L GH+ +V C+ W +L SAS DRTI++W
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERI--LTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW 272
Query: 517 GLKDLNVKRKDCHSNGVHYCN 537
D V + +G H+ N
Sbjct: 273 RAHD-GVLCRTLQGHG-HWVN 291
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 210 (79.0 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 360 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGDRRCLRTFIGHSK 417
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 418 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 477
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 478 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 537
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 538 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 597
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 598 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 656
Query: 511 RTIRIW 516
I++W
Sbjct: 657 GLIKLW 662
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 209 (78.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 61/306 (19%), Positives = 135/306 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQ-FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
+P + + + GHT V ++ F +G L S S D +WEV G GH K
Sbjct: 276 LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEV--YGERRCLRTFIGHSK 333
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIF-S 335
V + +++ Q L+ + ++ WD +G C+ + + V D++ +F +
Sbjct: 334 AVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVA 393
Query: 336 GANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE- 394
G +DK I W++ E+ + ++ + + ++ ++ + +L + + + V+
Sbjct: 394 GMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 453
Query: 395 RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK--YKGHKRSRFVIR 450
+YI E ++ + +LS + K+L ++ +I ++ + +L K +KGH + + +
Sbjct: 454 KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQ 513
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + +++ SG + ++ IW + L H W+P + + D
Sbjct: 514 VDFSP-DMSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWD 572
Query: 511 RTIRIW 516
I++W
Sbjct: 573 GLIKLW 578
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 71/306 (23%), Positives = 144/306 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
QGH V + +S +GK LAS + ++W D + G + L+GH K ++ +SW
Sbjct: 154 QGHRHWVLSISWSPDGKKLASGCKNGQILLW--DPSTGKQVGRALTGHSKWITALSWEPL 211
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ + + + + + +VR WD ++G C + W D ++S + D++I
Sbjct: 212 HANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTI 270
Query: 343 CMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+W L C RTL+ ++ + +++D + T E A ++ + + +
Sbjct: 271 KVWRAHDGVL-C----RTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQ-DLRGSL 323
Query: 398 EE--DQTITSFSLSRDN--KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+E ++ ++ ++L R + L+ + + LW+ + K +A+ GH+ +I
Sbjct: 324 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA---LINQVV 380
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ IAS S D + +W + + +L GH AV ++W+ A+ +L S S D T+
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTL 439
Query: 514 RIWGLK 519
++W +K
Sbjct: 440 KVWDVK 445
Score = 193 (73.0 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 80/313 (25%), Positives = 131/313 (41%)
Query: 220 PSRTLQI---LQGHTDEVWFLQFS--HNG---KYLASSSNDRSAIIWEVDLNGGVTLKHK 271
PS Q+ L GH+ + L + H +Y+ASSS D S +W D G +
Sbjct: 186 PSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW--DTTAG-RCERT 242
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD-- 329
L+GH + V+C+ W D L + + ++ W G + G + + D
Sbjct: 243 LTGHAQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 301
Query: 330 -RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD 388
R F A + S+ +L G L+ K +R L +L V G + + + L L
Sbjct: 302 LRTGAFEPA-EASVNAQDLRGS-LQELK-ERALSRYNL-VRGQGPERLVSGSDDFTLFLW 357
Query: 389 REAK----VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV-KLVAKYKGHK 443
A+ + R I S D++ + ++ I LW +G K +A +GH
Sbjct: 358 SPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW--DGRTGKYLASLRGHV 415
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
+ + I + + SGS DS + +W + L LPGH+ V V W+P +
Sbjct: 416 AAVYQIA---WSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP-DGQR 471
Query: 504 LASASDDRTIRIW 516
+AS D+ +RIW
Sbjct: 472 VASGGKDKCLRIW 484
Score = 192 (72.6 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 72/320 (22%), Positives = 139/320 (43%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GH++ V + FS GKYLAS S D + W++ T
Sbjct: 92 IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 148
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL-HVYEKAGLGLVSCGW 326
GH+ V +SWS D ++L + + WD S+G + + + W
Sbjct: 149 PHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSW 208
Query: 327 ---H--PDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
H P+ +++ S + D S+ +W+ E ++ L DG
Sbjct: 209 EPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDGLLYSASQDR 268
Query: 382 SALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQE--IHLWNIEGEVKLVAK 438
+ + + + R ++ + + +LS D E ++ ++ G ++ +
Sbjct: 269 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQ---E 325
Query: 439 YKGHKRSRF-VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSW 496
K SR+ ++R G E+ + SGS+D +++W A + + GH +N V +
Sbjct: 326 LKERALSRYNLVRG--QGPER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVF 381
Query: 497 NPANPHMLASASDDRTIRIW 516
+P + ++ASAS D++I++W
Sbjct: 382 SP-DSRVIASASFDKSIKLW 400
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 76/290 (26%), Positives = 129/290 (44%)
Query: 196 CMFHNSSDRDMSLYT-DHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRS 254
C + SS +D S+ D GR + RTL GH V L++ +G L S+S DR+
Sbjct: 217 CRYVASSSKDGSVRVWDTTAGRCE---RTLT---GHAQSVTCLRWGGDG-LLYSASQDRT 269
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCL 311
+W + GV L L GH V+ ++ S+D L T E A V D+ G+
Sbjct: 270 IKVWRA--HDGV-LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNAQDLR-GSLQ 324
Query: 312 HVYEKA--GLGLVSCGWHPDRKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLE 367
+ E+A LV G P+R + SG++D ++ +W K L G + L I+ +
Sbjct: 325 ELKERALSRYNLVR-GQGPER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQAL-INQVV 380
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEED-QTITSFSLSRDNKFLLVNLLNQEIH 425
+ D + I + + ++ L D R K + + + S D++ L+ + +
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 440
Query: 426 LWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+W+++ + KL GH + + G +ASG +D + IW R
Sbjct: 441 VWDVKAQ-KLSTDLPGHADEVYAVDWSPDGQR---VASGGKDKCLRIWRR 486
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/137 (28%), Positives = 60/137 (43%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR--SRFVIRSCFGGLEQAF 460
+ S S S D K L N +I LW+ ++ GH + + E +
Sbjct: 160 VLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRY 219
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+AS S+D V +W + L GH+ +V C+ W +L SAS DRTI++W D
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWG--GDGLLYSASQDRTIKVWRAHD 277
Query: 521 LNVKRKDCHSNGVHYCN 537
V + +G H+ N
Sbjct: 278 -GVLCRTLQGHG-HWVN 292
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 207 (77.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 76/320 (23%), Positives = 142/320 (44%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GH++ V + FS GKYLAS S D + W++ T
Sbjct: 93 IYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 149
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN----CLHVYEK--AGLGL 321
GH+ V +SWS D ++L + + WD S+G L + K GL
Sbjct: 150 PHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSW 209
Query: 322 VSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
+P+ +++ S + D S+ +W+ E T ++ L DG
Sbjct: 210 EPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDR 269
Query: 382 SALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQE--IHLWNIEGEVKLVAK 438
+ + + + R ++ + + +LS D E ++ +++G +K +
Sbjct: 270 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLK---E 326
Query: 439 YKGHKRSRF-VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSW 496
K SR+ ++R G E+ + SGS+D +++W A + + GH +N V +
Sbjct: 327 LKERASSRYNLVRG--QGPER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLF 382
Query: 497 NPANPHMLASASDDRTIRIW 516
+P + ++ASAS D++I++W
Sbjct: 383 SP-DSRIVASASFDKSIKLW 401
Score = 202 (76.2 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 69/306 (22%), Positives = 145/306 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
+GH V + +S +GK LAS + ++W D + G + L+GH K ++ +SW
Sbjct: 155 KGHRHWVLSISWSPDGKKLASGCKNGQILLW--DPSTGTQVGRTLTGHSKWITGLSWEPL 212
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ + + + + + +VR WD ++G C + + W D ++S + D++I
Sbjct: 213 HMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTI 271
Query: 343 CMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+W L C RTL+ ++ + +++D + T E A ++ + ++ +
Sbjct: 272 KVWRAHDGVL-C----RTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQ-DLQGSL 324
Query: 398 EE--DQTITSFSLSRDN--KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+E ++ + ++L R + L+ + + LW+ + K +A+ GH+ +I
Sbjct: 325 KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQA---LINQVL 381
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ +AS S D + +W + + +L GH AV ++W+ A+ +L S S D T+
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTL 440
Query: 514 RIWGLK 519
++W +K
Sbjct: 441 KVWDVK 446
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 79/315 (25%), Positives = 131/315 (41%)
Query: 220 PSRTLQI---LQGHTDEV----WF-LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHK 271
PS Q+ L GH+ + W L + +Y+ASSS D S +W D G +
Sbjct: 187 PSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW--DTTAG-RCERI 243
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD-- 329
L+GH + V+C+ W D L + + ++ W G + G + + D
Sbjct: 244 LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYA 302
Query: 330 -RKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
R F A + ++ +L G KEL+ +R +L V G + + + L
Sbjct: 303 LRTGAFEPA-EATVNAQDLQGSLKELK----ERASSRYNL-VRGQGPERLVSGSDDFTLF 356
Query: 387 LDREAK----VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV-KLVAKYKG 441
L A+ + R I S D++ + ++ I LW +G K +A +G
Sbjct: 357 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW--DGRTGKYLASLRG 414
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H + + I + + SGS DS + +W + L LPGH+ V V W+P +
Sbjct: 415 HVAAVYQIA---WSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSP-DG 470
Query: 502 HMLASASDDRTIRIW 516
+AS D+ +RIW
Sbjct: 471 QRVASGGKDKCLRIW 485
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 75/290 (25%), Positives = 130/290 (44%)
Query: 196 CMFHNSSDRDMSLYT-DHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRS 254
C + SS +D S+ D GR + +IL GHT V L++ +G L S+S DR+
Sbjct: 218 CRYVASSSKDGSVRVWDTTAGRCE------RILTGHTQSVTCLRWGGDG-LLYSASQDRT 270
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCL 311
+W + GV L L GH V+ ++ S+D L T E A V D+ G+
Sbjct: 271 IKVWRA--HDGV-LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDLQ-GSLK 325
Query: 312 HVYEKAG--LGLVSCGWHPDRKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLE 367
+ E+A LV G P+R + SG++D ++ +W K L G + L I+ +
Sbjct: 326 ELKERASSRYNLVR-GQGPER--LVSGSDDFTLFLWSPAEDKKPLARMTGHQAL-INQVL 381
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEED-QTITSFSLSRDNKFLLVNLLNQEIH 425
+ D + + + + ++ L D R K + + + S D++ L+ + +
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 441
Query: 426 LWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+W+++ + KL GH + + G +ASG +D + IW R
Sbjct: 442 VWDVKAQ-KLTTDLPGHADEVYAVDWSPDGQR---VASGGKDKCLRIWRR 487
Score = 136 (52.9 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL----EQ 458
+ S S S D K L N +I LW+ ++ GH S+++ + L E
Sbjct: 161 VLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGH--SKWITGLSWEPLHMNPEC 218
Query: 459 AFIASGSEDSQVYIWHRAS--CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
++AS S+D V +W + C+ I L GH+ +V C+ W +L SAS DRTI++W
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERI--LTGHTQSVTCLRWG--GDGLLYSASQDRTIKVW 274
Query: 517 GLKDLNVKRKDCHSNGVHYCN 537
D V + +G H+ N
Sbjct: 275 RAHD-GVLCRTLQGHG-HWVN 293
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 213 (80.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 77/312 (24%), Positives = 144/312 (46%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+++ HTD V+ FS +G+ +AS D++ +++ + G L K H+ V C ++S
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAE-TGEKLLDIK--AHEDEVLCCAFS 666
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW--HPDRKWIFSGANDKSIC 343
SDD + TC ++ V+ WD ++G +H Y++ + C + + + +G+ND +
Sbjct: 667 SDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726
Query: 344 MWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTI 403
+W+L KE T ++ + D + + + + L L D + ER + +
Sbjct: 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER---KSINV 783
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA-KYK---------G-----HKRSRFV 448
F LS ++ V ++ + W+ +G+ +VA K K G H
Sbjct: 784 KRFFLSSEDPPEDVEVI-VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842
Query: 449 IRSC-FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
I+ C F + + + S+ V +W+ S + GH V+ V ++P L +A
Sbjct: 843 IQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFL-TA 900
Query: 508 SDDRTIRIWGLK 519
SDD+TIR+W K
Sbjct: 901 SDDQTIRVWETK 912
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 64/299 (21%), Positives = 134/299 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G ++S+D++ +WE V N + LK ++ V +
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEID--------VVF 930
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + +R + +G + + C P +++ G D +I +
Sbjct: 931 QENETMVLAV---DNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI 987
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-T 402
EL + G + + ++ T+DGK +I+ ++S + + + + +++ Q T
Sbjct: 988 IELPNNRVFSSGVGHKKA-VRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET 1046
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ F L +D++ L + + + +WN I G ++ + H+ + + SC +
Sbjct: 1047 VKDFRLLQDSRLLSWSF-DGTVKVWNVITGRIE--RDFTCHQGT---VLSCAISSDATKF 1100
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+S S D IW + L GH+G V C +++ + +LA+ D+ IRIW + D
Sbjct: 1101 SSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFS-LDGILLATGDDNGEIRIWNVSD 1158
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 210 (79.0 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 73/304 (24%), Positives = 136/304 (44%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
++L+GH D V G + S S+D + +W G L+ L GH V W
Sbjct: 427 KVLKGHDDHV-ITCLQFCGNRIVSGSDDNTLKVWSAVT--GKCLR-TLVGHTGGV----W 478
Query: 285 SSD--DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS D +++ + ++ W+ +G C+H V C H K + SG+ D ++
Sbjct: 479 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLY-GHTSTVRC-MHLHEKRVVSGSRDATL 536
Query: 343 CMWELG-GKELECWKGQRTLKISDLE-VTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+W++ G+ L G ++ + V DG+++++ + + + D E + + +
Sbjct: 537 RVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQG 592
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE--Q 458
T +SL D ++ L+ I +W++E + GH+ S G+E
Sbjct: 593 HTNRVYSLQFDGIHVVSGSLDTSIRVWDVETG-NCIHTLTGHQ-------SLTSGMELKD 644
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPG---HSGAVNCVSWNPANPHMLASASDDRTIRI 515
+ SG+ DS V IW + + L G H AV C+ +N + + ++SDD T+++
Sbjct: 645 NILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNK---NFVITSSDDGTVKL 701
Query: 516 WGLK 519
W L+
Sbjct: 702 WDLR 705
Score = 194 (73.4 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 68/281 (24%), Positives = 125/281 (44%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+ + L+ L GHT VW Q N + S S DR+ +W + + H L GH
Sbjct: 462 VTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI---HTLYGHTST 516
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V C+ ++++++ + +R WD+ +G CLHV + V C + R+ + SGA
Sbjct: 517 VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRR-VVSGAY 572
Query: 339 DKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY 396
D + +W+ + L +G T ++ L+ DG +++ ++++ + D E
Sbjct: 573 DFMVKVWDPETETCLHTLQGH-TNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT 629
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
+ Q++TS +DN L+ + + +W+I+ L HK V +C
Sbjct: 630 LTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAV--TCLQ-F 685
Query: 457 EQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSW 496
+ F+ + S+D V +W + + I L SG V W
Sbjct: 686 NKNFVITSSDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVW 726
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 208 (78.3 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 70/306 (22%), Positives = 129/306 (42%)
Query: 214 CGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
C ++PS L I H EV ++FS + LA+ DR +WEV ++G K L+
Sbjct: 300 CADVRVPSTALHIFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEV-VSGRCEPKGALT 358
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ + + S LL + A R W V H ++S + D I
Sbjct: 359 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARI 418
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAK 392
SG+ D+++ +W+L K +D+ T K+ + +
Sbjct: 419 VSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDISYQNYH 478
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
+++ + + +TS L+ D LL + + + ++ V+ +G K R
Sbjct: 479 IQKQLNKLCRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRV 538
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALP-GHSGAVNCVSWNPANPHMLASASDD 510
F + +F+A+GS D +Y+W+ + L L GHS A+N VSW+ + + +
Sbjct: 539 TFSP-DGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSSAINSVSWSLSGAFVASVEKGS 597
Query: 511 RTIRIW 516
+ + +W
Sbjct: 598 KAV-LW 602
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 211 (79.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 82/353 (23%), Positives = 155/353 (43%)
Query: 186 EQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKY 245
E + V Q+ D M LY + + I + + +++ HTD V+ FS +G+
Sbjct: 572 ETSEVYQQAKLQAKQEVDNGM-LYLEW-INKKNITNLSRLVVRPHTDAVYHACFSEDGQR 629
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
+AS D++ +++ + G L+ K H+ V C ++S+DD+ + TC V++ V+ W+
Sbjct: 630 IASCGADKTLQVFKAE-TGEKLLEIK--AHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 686
Query: 306 SSGNCLHVYEKAGLGLVSCGWHPDRKWIF--SGANDKSICMWELGGKELECWKGQRTLKI 363
+G +H Y++ + C + + +G++D + +W+L KE T +
Sbjct: 687 MTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSV 746
Query: 364 SDLEVTSDGKQIITMCKESALLLLDREAKVERY-IEEDQTITSFSLSRDNKFLLVNLLNQ 422
+ + D K + + + L L D + ER I Q + +++ ++V +
Sbjct: 747 NHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDMEVIVKCCS- 805
Query: 423 EIHLWNIEG-EVKLVAKYK------------G--HKRSRFVIRSC-FGGLEQAFIASGSE 466
W+ +G + + AK K G H I+ C F + + S+
Sbjct: 806 ----WSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQ 861
Query: 467 DSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
V +W+ S + GH V+ V ++P L S SDD+TIR+W K
Sbjct: 862 YC-VELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTS-SDDQTIRLWETK 912
Score = 150 (57.9 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 70/305 (22%), Positives = 133/305 (43%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G +SS+D++ +WE V N V LK + V V
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQE-------VDVVF- 930
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+ +++ V+ +RR + +G + + C P ++I G + +I +
Sbjct: 931 --QENEVMVLAVDH-IRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEI 987
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-TI 403
EL + + Q + ++ T+D K +I+ ++ + + + + ++ Q T+
Sbjct: 988 LELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETV 1047
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV-----IRSCFGGLEQ 458
F L ++++ L W+ +G VK+ G+K FV + SC +
Sbjct: 1048 KDFRLLKNSRLLS----------WSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDA 1097
Query: 459 AFIASGSEDSQVYIWHRASCDLI---GALPGHSGAVNCVSWNPANPHMLASASDDRTIRI 515
+S S D IW S DL+ L GH+G V C +++ + +LA+ D+ IRI
Sbjct: 1098 TKFSSTSADKTAKIW---SFDLLLPLHELRGHNGCVRCSAFS-VDSTLLATGDDNGEIRI 1153
Query: 516 WGLKD 520
W + +
Sbjct: 1154 WNVSN 1158
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 39/164 (23%), Positives = 78/164 (47%)
Query: 369 TSDGKQIITMCKESALLLLDREAKVERYIE----EDQTITSFSLSRDNKFLLVNLLNQEI 424
+ DG++I + + L + E E+ +E ED+ + + S D++F+ +++++
Sbjct: 624 SEDGQRIASCGADKTLQVFKAETG-EKLLEIKAHEDEVLCC-AFSTDDRFIATCSVDKKV 681
Query: 425 HLWN-IEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQVYIWHRASCDLI 481
+WN + GE LV Y H + C +A+GS D + +W +
Sbjct: 682 KIWNSMTGE--LVHTYDEHSEQ---VNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECR 736
Query: 482 GALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKR 525
+ GH+ +VN ++P + +LAS S D T+++W N ++
Sbjct: 737 NTMFGHTNSVNHCRFSP-DDKLLASCSADGTLKLWDATSANERK 779
Score = 123 (48.4 bits), Expect = 0.00076, P = 0.00076
Identities = 46/168 (27%), Positives = 71/168 (42%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
H V SH+ +S+S D++A IW DL + H+L GH V C ++S D
Sbjct: 1084 HQGTVLSCDISHDATKFSSTSADKTAKIWSFDL---LLPLHELRGHNGCVRCSAFSVDST 1140
Query: 290 QLLTCGVEEAVRRWDVSSGNCLHV---YEKAGLGLVSCGW------HPDRKWIFSGANDK 340
L T +R W+VS+G LH+ + G GW PD K + S
Sbjct: 1141 LLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHG-GWVTDLCFSPDGKMLISAGG-- 1197
Query: 341 SICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
I W + G+ + + T + + V+ D K +T+ L +L
Sbjct: 1198 YIKWWNVVTGESSQTFYTNGT-NLKKIHVSPDFKTYVTVDNLGILYIL 1244
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 199 (75.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 73/302 (24%), Positives = 126/302 (41%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS-- 286
GH V + ++ +GK LAS S IIW+ + G LSGH+K ++C++W
Sbjct: 159 GHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPET--GQQKGRPLSGHKKHINCLAWEPYH 216
Query: 287 -DDQ--QLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
D + +L + + R WDV G CL + + W I++ + D+++
Sbjct: 217 RDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWG-GAGLIYTSSKDRTVK 275
Query: 344 MWELG-GKELECWKGQ----RTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIE 398
MW G + G + +S V G + + L L E E ++
Sbjct: 276 MWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALK 335
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQE-IHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLE 457
Q + D LV+ + ++LW + K V + GH+ V+ +
Sbjct: 336 RYQAVCP-----DEVESLVSCSDDNTLYLWR-NNQNKCVERMTGHQN---VVNDVKYSPD 386
Query: 458 QAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWG 517
IAS S D V +W + + GH AV V+W+ A+ ++ S S D T+++W
Sbjct: 387 VKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWS-ADSRLIVSGSKDSTLKVWS 445
Query: 518 LK 519
++
Sbjct: 446 VQ 447
Score = 191 (72.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 68/277 (24%), Positives = 113/277 (40%)
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
LAS+S D IW+V L G L + ++GH V+ V W + T + V+ W
Sbjct: 224 LASASGDGDCRIWDVKL--GQCLMN-IAGHTNAVTAVRWGGAGL-IYTSSKDRTVKMWRA 279
Query: 306 SSGNCLHVYEKAGLGLVSCGWHPD---RKWIFSGANDKSICMWELGGKELECWKGQRTLK 362
+ G + + + D R F D+S L +EL+ + LK
Sbjct: 280 ADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQ----ESALK 335
Query: 363 ISDLEVTSDGKQIITMCKESALLLLDREAK---VERYIEEDQTITSFSLSRDNKFLLVNL 419
V D + + C + L L R + VER + S D K +
Sbjct: 336 RYQA-VCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASAS 394
Query: 420 LNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCD 479
++ + LW + + +A ++GH ++ + + + I SGS+DS + +W +
Sbjct: 395 FDKSVRLWRAS-DGQYMATFRGHVQAVYTVA---WSADSRLIVSGSKDSTLKVWSVQTKK 450
Query: 480 LIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L LPGH+ V V W P + AS D+ I++W
Sbjct: 451 LAQELPGHADEVFGVDWAPDGSRV-ASGGKDKVIKLW 486
Score = 126 (49.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 40/170 (23%), Positives = 76/170 (44%)
Query: 182 EHLVEQALVLQREAC------MFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVW 235
E L E AL + C + S D + L+ ++Q ++ ++ + GH + V
Sbjct: 327 EELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQ-------NKCVERMTGHQNVVN 379
Query: 236 FLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCG 295
+++S + K +AS+S D+S +W +G + GH + V V+WS+D + +++
Sbjct: 380 DVKYSPDVKLIASASFDKSVRLWRAS-DGQYMATFR--GHVQAVYTVAWSADSRLIVSGS 436
Query: 296 VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
+ ++ W V + + W PD + SG DK I +W
Sbjct: 437 KDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 122 (48.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 30/88 (34%), Positives = 47/88 (53%)
Query: 221 SRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVS 280
+R + GH + V L FS +G +LAS S D + +W DLN T +GH++ V
Sbjct: 109 TRCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLW--DLNTE-TPHFTCTGHKQWVL 165
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSG 308
CVSW+ D ++L + ++ WD +G
Sbjct: 166 CVSWAPDGKRLASGCKAGSIIIWDPETG 193
Score = 104 (41.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S+D+ +Y+W + + GH VN V ++P + ++ASAS D+++R+W D
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSP-DVKLIASASFDKSVRLWRASD 406
Score = 49 (22.3 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 30 AKALYSLGYTKSGAHLEEESG 50
A+A+ SL ++ GAHL SG
Sbjct: 119 AEAVVSLNFSPDGAHLASGSG 139
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 200 (75.5 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 77/330 (23%), Positives = 132/330 (40%)
Query: 203 DRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDL 262
D+ + ++ D GR +P L GHT + + +S G++LAS+S D + IW+
Sbjct: 35 DKTIRIWADDGTGR-WVPKTVLS--DGHTRTIRDVAWSPCGRFLASASFDATVAIWD-RR 90
Query: 263 NGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGL 319
+G L GH+ V VSWS L TC +++V W+V+ + C V
Sbjct: 91 SGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQ 150
Query: 320 GLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMC 379
+ WHP+ + S + D +I ++ + + W TL D V S
Sbjct: 151 DVKKVEWHPNEDVLASASYDNTIQLYREDLADSD-WSSFDTLASHDSTVWS--------- 200
Query: 380 KESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY 439
+ D +DQT+ + + V + + +W K V
Sbjct: 201 -----IAFDASGSRLASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVW------KCVCTL 249
Query: 440 KG-HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS--------CDLIGALPGHSGA 490
G H R+ + I C + IA+ D V I+ + +++ + HS
Sbjct: 250 SGFHSRAVYDISWC---KKTGLIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQD 306
Query: 491 VNCVSWNPANPHMLASASDDRTIRIWGLKD 520
N V W+P +L + SDD +++W +D
Sbjct: 307 ANTVEWSPTVAGLLVTTSDDGDVKLWKFED 336
Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/135 (29%), Positives = 58/135 (42%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCV 282
LQ L GH VW + LA+ D++ IW D G K LS GH + + V
Sbjct: 7 LQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDV 66
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+WS + L + + V WD SG C E + S W + + + DK
Sbjct: 67 AWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDK 126
Query: 341 SICMWELGGK-ELEC 354
S+ +WE+ + E EC
Sbjct: 127 SVWIWEVAQEDEYEC 141
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 208 (78.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 49/181 (27%), Positives = 92/181 (50%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW + FS G Y A++S+D++A +W D + + +GH V CVS+ +
Sbjct: 564 KGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRI---FAGHLNDVDCVSFHPN 620
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T ++ R WDVS+G+ + ++ ++S PD +W+ +G+ D I +W++
Sbjct: 621 GCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQTITS 405
G GK L+ +G I L + +G +I+ + + + D ++A E E D+
Sbjct: 681 GTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEPDEPFIG 740
Query: 406 F 406
+
Sbjct: 741 Y 741
Score = 197 (74.4 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 60/225 (26%), Positives = 111/225 (49%)
Query: 216 RDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGH 275
+D+ P T + L GH+ V+ FS + KYL S S D++ +W +D + + + +K GH
Sbjct: 512 KDEDP--TCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTAL-VSYK--GH 566
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK---AG-LGLVSC-GWHPDR 330
PV VS+S T ++ R W +C H+Y AG L V C +HP+
Sbjct: 567 NHPVWDVSFSPLGHYFATASHDQTARLW-----SCDHIYPLRIFAGHLNDVDCVSFHPNG 621
Query: 331 KWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD- 388
++F+G++DK+ MW++ G + + G T + + V DG+ + T ++ + + D
Sbjct: 622 CYVFTGSSDKTCRMWDVSTGDSVRLFLGH-TAPVISIAVCPDGRWLSTGSEDGIINVWDI 680
Query: 389 ---REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
+ K R ++ I S S S++ L+ + + +W+++
Sbjct: 681 GTGKRLKQMRGHGKN-AIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 153 (58.9 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 388 DREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
D + + + T+ S S S DNK+LL ++ + LW+++ LV+ YKGH +
Sbjct: 513 DEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVS-YKGHNHPVW 571
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL---PGHSGAVNCVSWNPANPHML 504
+ F L F A+ S D +W SCD I L GH V+CVS++P N +
Sbjct: 572 DVS--FSPLGHYF-ATASHDQTARLW---SCDHIYPLRIFAGHLNDVDCVSFHP-NGCYV 624
Query: 505 ASASDDRTIRIW 516
+ S D+T R+W
Sbjct: 625 FTGSSDKTCRMW 636
Score = 121 (47.7 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 57/275 (20%), Positives = 112/275 (40%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVD---LNG-GVTLKHK--- 271
+PS + Q ++ L FS + + A+ D IW +D LN + L +
Sbjct: 454 LPSVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKD 513
Query: 272 -------LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC 324
L GH V S+S D++ LL+ ++ VR W + + L Y+ +
Sbjct: 514 EDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDV 573
Query: 325 GWHPDRKWIFSGANDKSICMWELGG-KELECWKGQRTLKISDLEVTS---DGKQIITMCK 380
+ P + + ++D++ +W L + G ++D++ S +G + T
Sbjct: 574 SFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGH----LNDVDCVSFHPNGCYVFTGSS 629
Query: 381 ESALLLLDREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK 438
+ + D V ++ + S ++ D ++L + I++W+I G K + +
Sbjct: 630 DKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDI-GTGKRLKQ 688
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+GH ++ I S E + SG D V +W
Sbjct: 689 MRGHGKN--AIYSLSYSKEGNVLISGGADHTVRVW 721
Score = 45 (20.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 7 SEGDEDVIGPA-GVIKRVEFVRIIAKALYSLGYTKSGAHLEEESG 50
S+G G + G + RI+ + L GY ++ A L ESG
Sbjct: 41 SQGQSQQQGRSNGPFSASDLNRIVLEYLNKKGYHRTEAMLRAESG 85
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 204 (76.9 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 70/307 (22%), Positives = 135/307 (43%)
Query: 215 GRD-QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
G++ ++P+ + + H EV +QFS + LA+ DR +WEV K LS
Sbjct: 321 GKEVRVPTTAMSVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEV-FGDKCEFKGSLS 379
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ + + S LL + A R W V H ++S + D I
Sbjct: 380 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI 439
Query: 334 FSGANDKSICMWELGGKELECWKGQRT-LKISDLEVTSDGKQIITMCKESALLLLD-REA 391
SG++D+++ +W+L K C K +D+ T + +++ + + D R
Sbjct: 440 VSGSHDRTLKLWDLRSKV--CIKTVFAGSSCNDIVCTE--QCVMSGHFDKKIRFWDIRSE 495
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIR 450
+ R +E IT+ L+ + LL + + + ++ V+ G K R
Sbjct: 496 SIVREMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTR 555
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH-SGAVNCVSWNPANPHMLASASD 509
+ F + +++A+G+ + +YIW+ S + L H S ++N V+W+PA H++
Sbjct: 556 AVFSP-DGSYVAAGAAEGSLYIWNVLSGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKG 614
Query: 510 DRTIRIW 516
+ + +W
Sbjct: 615 SKAV-LW 620
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 204 (76.9 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 42/120 (35%), Positives = 65/120 (54%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y AS S+DR+A IW +D + + ++GH V CV W +
Sbjct: 457 KGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRI---MAGHLSDVDCVQWHPN 513
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T ++ VR WDV +G C+ ++ ++S PD +++ SG D +I MW+L
Sbjct: 514 CNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDL 573
Score = 137 (53.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 36/118 (30%), Positives = 58/118 (49%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIR-SCFGGLEQAFI 461
+ S + S F+L + + I LW+ + LV YKGH + + S FG +
Sbjct: 421 VYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVC-YKGHNYPVWDAQFSPFGH----YF 475
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
AS S D IW + + GH V+CV W+P N + +A+ S D+T+R+W ++
Sbjct: 476 ASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHP-NCNYIATGSSDKTVRLWDVQ 532
Score = 126 (49.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 45/214 (21%), Positives = 89/214 (41%)
Query: 323 SCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
S + P ++ S + D +I +W L C+KG + D + + G + +
Sbjct: 423 SATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHN-YPVWDAQFSPFGHYFASCSHD 481
Query: 382 SALLL--LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAK 438
+ +DR + + + ++ ++ + LW+++ GE V
Sbjct: 482 RTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGEC--VRI 539
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNP 498
+ GH R ++ S + ++ASG ED + +W ++ I L GH+ V +S++
Sbjct: 540 FIGH---RSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS- 595
Query: 499 ANPHMLASASDDRTIRIWGLKDLNVKRKDCHSNG 532
+LAS S D T+++W + K NG
Sbjct: 596 GEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNG 629
Score = 124 (48.7 bits), Expect = 0.00027, P = 0.00027
Identities = 31/128 (24%), Positives = 64/128 (50%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L+I+ GH +V +Q+ N Y+A+ S+D++ +W+V V + GH+ V ++
Sbjct: 495 LRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRI---FIGHRSMVLSLA 551
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH----PDRKWIFSGAND 339
S D + + + + + WD+S+ C+ +G SC W + + SG+ D
Sbjct: 552 MSPDGRYMASGDEDGTIMMWDLSTARCITPL----MGHNSCVWSLSYSGEGSLLASGSAD 607
Query: 340 KSICMWEL 347
++ +W++
Sbjct: 608 CTVKLWDV 615
Score = 44 (20.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 240 SHNGKYLASSSNDRSAIIWEV 260
SH+G +A +D S +W++
Sbjct: 361 SHDGSLVAGGFSDSSIKVWDM 381
Score = 42 (19.8 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 180 RLEHL-VEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQ 238
RLE + V A ++ E + S+D + S+ D + R Q+ S + + +T F+
Sbjct: 296 RLETITVSPAPRVKPELALPVMSTDVEQSILEDLR-NRVQLSSVAMPSVSFYT----FVN 350
Query: 239 FSHNGKYLASSSNDRSAI 256
+HNG +S S+D S +
Sbjct: 351 -THNGLNCSSISHDGSLV 367
Score = 38 (18.4 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 13/52 (25%), Positives = 24/52 (46%)
Query: 329 DRKWIFSGANDKSICMWELGGKELECWKG--QRTLKISDLEVTSDGKQIITM 378
D + G +D SI +W++ K + G Q SD + +G++ T+
Sbjct: 363 DGSLVAGGFSDSSIKVWDMA-KIGQAGSGALQAENDSSDQSIGPNGRRSYTL 413
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 202 (76.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 70/312 (22%), Positives = 138/312 (44%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
Q P TL+ GH + V + +S +G+ +A+ S D + +W D G L L GH K
Sbjct: 176 QTPMHTLK---GHYNWVLCVSWSPDGEVIATGSMDNTIRLW--DPKSGQCLGDALRGHSK 230
Query: 278 PVSCVSWS-------SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCGWHPD 329
++ +SW +L + + ++ WD S C Y +G VSC
Sbjct: 231 WITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQ--YTMSGHTNSVSCVKWGG 288
Query: 330 RKWIFSGANDKSICMWELG--GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ ++SG++D+++ +W++ G+ + K ++ L +++D I +
Sbjct: 289 QGLLYSGSHDRTVRVWDINSQGRCINILKSHAHW-VNHLSLSTDYALRIGAFDHTGKKPS 347
Query: 388 DREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
E ++ +E + I + + ++ + + LWN K +A+ GH++
Sbjct: 348 TPEEAQKKALENYEKICKKN-GNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQK--L 404
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
V F + +I S S D+ + +W I GH +V V+W+ ++ +L S
Sbjct: 405 VNHVAFSP-DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWS-SDCRLLVSC 462
Query: 508 SDDRTIRIWGLK 519
S D T+++W ++
Sbjct: 463 SKDTTLKVWDVR 474
Score = 184 (69.8 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 67/279 (24%), Positives = 120/279 (43%)
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEE-AVRRWD 304
LASSS D + IW+ ++ +SGH VSCV W Q LL G + VR WD
Sbjct: 251 LASSSKDGTIKIWDTVSR---VCQYTMSGHTNSVSCVKWGG--QGLLYSGSHDRTVRVWD 305
Query: 305 VSS-GNCLHVYEKAGLGLVSCGWHPD---RKWIFSGANDKSICMWELGGKELECWKGQRT 360
++S G C+++ + + D R F K E K LE ++
Sbjct: 306 INSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYE---- 361
Query: 361 LKISDLEVTSDGKQIITMCKESALLLLD--REAK-VERYIEEDQTITSFSLSRDNKFLLV 417
KI S+ + ++T + + L + + K + R + + + S D ++++
Sbjct: 362 -KICKKNGNSE-EMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVS 419
Query: 418 NLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS 477
+ I LW+ + K ++ ++GH S + + + + S S+D+ + +W +
Sbjct: 420 ASFDNSIKLWDGR-DGKFISTFRGHVASVYQVA---WSSDCRLLVSCSKDTTLKVWDVRT 475
Query: 478 CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L LPGH V V W+ + + S D+ +R+W
Sbjct: 476 RKLSVDLPGHKDEVYTVDWS-VDGKRVCSGGKDKMVRLW 513
Score = 163 (62.4 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 41/158 (25%), Positives = 70/158 (44%)
Query: 198 FHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFS-HNGKYLASSSNDRSAI 256
++++ D+ LYT + + +R+ + GH + F+ H + + + D +A
Sbjct: 110 YNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTAR 169
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCL-HVYE 315
IW+ D T H L GH V CVSWS D + + T ++ +R WD SG CL
Sbjct: 170 IWDCDTQ---TPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALR 226
Query: 316 KAGLGLVSCGWHP-------DRKWIFSGANDKSICMWE 346
+ S W P + + S + D +I +W+
Sbjct: 227 GHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD 264
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
+ GH V + FS +G+Y+ S+S D S +W D G + GH V V+WSS
Sbjct: 398 MTGHQKLVNHVAFSPDGRYIVSASFDNSIKLW--DGRDGKFIS-TFRGHVASVYQVAWSS 454
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLV-SCGWHPDRKWIFSGANDKSICMW 345
D + L++C + ++ WDV + L V V + W D K + SG DK + +W
Sbjct: 455 DCRLLVSCSKDTTLKVWDVRTRK-LSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 85 (35.0 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 455 GLEQAFIASGSEDSQVYIWHRA-SCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
G + + + S+D +++W+ S I + GH VN V+++P +++ SAS D +I
Sbjct: 368 GNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV-SASFDNSI 426
Query: 514 RIWGLKD 520
++W +D
Sbjct: 427 KLWDGRD 433
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 195 (73.7 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 77/312 (24%), Positives = 136/312 (43%)
Query: 227 LQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVSCV 282
L+GH+ V L + N L S S D+S I+W + D+N GV + +L+GH VS
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVA-QRRLTGHSHFVSDC 69
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ S D L+ ++ +R WD+ G C H + ++S PD + + SG+ DK+I
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 343 CMWEL-GGKELECWKGQRTLKISDLEVTS--DGKQIITMCKESALLLLDREA---KVERY 396
+W + G + G + +S + + D ++ + A+ + D E + Y
Sbjct: 130 KIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY 189
Query: 397 ----------IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSR 446
I D ++ + S RD +L +L N+ HL+++E + + A +R
Sbjct: 190 GHTGYVSAVTISPDGSLCA-SGGRDGTLMLWDL-NESTHLYSLEAKANINALV--FSPNR 245
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVS--WNPANPHML 504
+ + + G + F E + D +G + S C+S W+P + L
Sbjct: 246 YWLCAATGSSIRIFDLETQEKVD-----ELTVDFVG-VGKKSSEPECISLTWSP-DGQTL 298
Query: 505 ASASDDRTIRIW 516
S D IR+W
Sbjct: 299 FSGWTDNLIRVW 310
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 49/195 (25%), Positives = 88/195 (45%)
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLL 387
+ SG+ DKSI +W L ++ QR L +SD ++ D ++ + + L
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLW 90
Query: 388 DREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D E +++ + S S+S DN+ ++ ++ I +WNI G K GH
Sbjct: 91 DLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDW 150
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLA 505
+R F+++G D V +W + L + GH+G V+ V+ +P + + A
Sbjct: 151 VSCVRFSPNPDNLTFVSAGW-DKAVKVWDLETFSLRTSHYGHTGYVSAVTISP-DGSLCA 208
Query: 506 SASDDRTIRIWGLKD 520
S D T+ +W L +
Sbjct: 209 SGGRDGTLMLWDLNE 223
Score = 118 (46.6 bits), Expect = 0.00037, P = 0.00037
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
++ +LS D+ + L ++ I LW++E GE ++ GH + S + +
Sbjct: 66 VSDCALSFDSHYALSASWDKTIRLWDLEKGEC--THQFVGHTSD---VLSVSISPDNRQV 120
Query: 462 ASGSEDSQVYIWHR-ASCDLIGALPGHSGAVNCVSWNPANPHMLA--SASDDRTIRIWGL 518
SGS D + IW+ +C GHS V+CV ++P NP L SA D+ +++W L
Sbjct: 121 VSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSP-NPDNLTFVSAGWDKAVKVWDL 179
Query: 519 KDLNVK 524
+ +++
Sbjct: 180 ETFSLR 185
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 201 (75.8 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 76/319 (23%), Positives = 146/319 (45%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GHT+ V + FS GKYLAS S D + W++ T
Sbjct: 104 IYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 160
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GW 326
+ GH+ V ++WS D ++L + + WD ++GN + ++C W
Sbjct: 161 PQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCW 220
Query: 327 ---H--PDRKWIFSGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCK 380
H P+ +++ S + D SI +W+ L G+ + G T ++ ++ DG +
Sbjct: 221 EPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGH-TQSVTCVKWGGDGLLYSSSQD 279
Query: 381 ESALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY 439
+ + ++ + R ++ + + +LS D L N + +A+
Sbjct: 280 RTIKVWRSQDGILCRTLQGHAHWVNTMALSTDY-VLRTGAFEPAEATINPQDMSGSLAEL 338
Query: 440 KGHKRSRF-VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSWN 497
K + R+ +R G E+ + SGS+D +++W A + + GH +N V ++
Sbjct: 339 KDKAQQRYDKVRG--QGPER--LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFS 394
Query: 498 PANPHMLASASDDRTIRIW 516
P + ++ASAS D++I++W
Sbjct: 395 P-DTRIIASASFDKSIKLW 412
Score = 185 (70.2 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 75/305 (24%), Positives = 124/305 (40%)
Query: 225 QILQGHTDEV----WF-LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
++L GH+ + W L + +YLAS+S D S IW+ L G L+GH + V
Sbjct: 206 RVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDT-LMG--RCDKILTGHTQSV 262
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD---RKWIFSG 336
+CV W D L + + ++ W G + + + D R F
Sbjct: 263 TCVKWGGDGL-LYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEP 321
Query: 337 ANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK---- 392
A + +I ++ G E K + + +V G + + + L L R A+
Sbjct: 322 A-EATINPQDMSGSLAEL-KDKAQQRYD--KVRGQGPERLVSGSDDFTLFLWRPAEDKKP 377
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV-KLVAKYKGHKRSRFVIRS 451
+ER I S D + + ++ I LW EG K + +GH + + I
Sbjct: 378 LERMTGHQALINQVLFSPDTRIIASASFDKSIKLW--EGRTGKYLTSLRGHVSAVYQIA- 434
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
+ + SGS DS + +W + L LPGH+ V W+P + +AS D+
Sbjct: 435 --WSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSP-DGQRVASGGKDK 491
Query: 512 TIRIW 516
+RIW
Sbjct: 492 CLRIW 496
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/124 (32%), Positives = 61/124 (49%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL----EQ 458
+ S + S D K L N +I LW+ ++ GH S+++ C+ L E
Sbjct: 172 VLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGH--SKWITCLCWEPLHINPEC 229
Query: 459 AFIASGSEDSQVYIWHR--ASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
++AS S+D + IW CD I L GH+ +V CV W +L S+S DRTI++W
Sbjct: 230 RYLASASKDGSIRIWDTLMGRCDKI--LTGHTQSVTCVKWG--GDGLLYSSSQDRTIKVW 285
Query: 517 GLKD 520
+D
Sbjct: 286 RSQD 289
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 68/270 (25%), Positives = 120/270 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + R +IL GHT V +++ +G L SSS DR+ +W G+ L L GH
Sbjct: 245 DTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQ--DGI-LCRTLQGHA 300
Query: 277 KPVSCVSWSSDDQQLLTCGV----EEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRK 331
V+ ++ S+D +L G E + D+S G+ + +KA G P+R
Sbjct: 301 HWVNTMALSTD--YVLRTGAFEPAEATINPQDMS-GSLAELKDKAQQRYDKVRGQGPER- 356
Query: 332 WIFSGANDKSICMWELGG--KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR 389
+ SG++D ++ +W K LE G + L I+ + + D + I + + ++ L
Sbjct: 357 -LVSGSDDFTLFLWRPAEDKKPLERMTGHQAL-INQVLFSPDTRIIASASFDKSIKLW-- 412
Query: 390 EAKVERYIEEDQ----TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
E + +Y+ + + + S D++ L+ + + +W+ E + KL GH
Sbjct: 413 EGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETK-KLAIDLPGHADE 471
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
F G +ASG +D + IW R
Sbjct: 472 VFATDWSPDGQR---VASGGKDKCLRIWRR 498
>UNIPROTKB|Q5R448 [details] [associations]
symbol:DCAF8 "DDB1- and CUL4-associated factor 8"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0016567 GO:GO:0080008
CTD:50717 HOVERGEN:HBG053807 KO:K11804 EMBL:CR861411
RefSeq:NP_001127032.1 UniGene:Pab.18321 ProteinModelPortal:Q5R448
GeneID:100174058 KEGG:pon:100174058 InParanoid:Q5R448
Uniprot:Q5R448
Length = 597
Score = 168 (64.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 38/122 (31%), Positives = 65/122 (53%)
Query: 398 EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGG 455
E IT S D LL + +++I+L+N + V +YKGH+ + V F G
Sbjct: 385 ESKANITCLVYSHDGTELLASYNDEDIYLFNSSHSDGAQYVKRYKGHRNNATVKGVNFYG 444
Query: 456 LEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIR 514
+ F+ SGS+ +++W ++SC +I + G G V NC+ +P P +LA++ D ++
Sbjct: 445 PKSEFVVSGSDCGHIFLWEKSSCQIIQFMEGDKGGVVNCLEPHPHLP-VLATSGLDHDVK 503
Query: 515 IW 516
IW
Sbjct: 504 IW 505
Score = 81 (33.6 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW-- 284
L+GHT V L F+ G +LAS S+D ++W+ V L + SGH+ V +
Sbjct: 189 LEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPV-LDFE-SGHKSNVFQAKFLP 246
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNC 310
+S D L + VR ++S+ C
Sbjct: 247 NSGDSTLAMRARDGQVRVAELSATQC 272
Score = 43 (20.2 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 5/15 (33%), Positives = 11/15 (73%)
Query: 332 WIFSGANDKSICMWE 346
W+ SG++D + +W+
Sbjct: 207 WLASGSDDLKVVVWD 221
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 146 (56.5 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 43/130 (33%), Positives = 65/130 (50%)
Query: 227 LQGHTDEVWFLQFS-HNGK-YLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
L+GH V L + G LAS S+D + +W D + LSGH VS V +
Sbjct: 152 LKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLW--DPSKDYANIRTLSGHDHSVSSVRF 209
Query: 285 -SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHP--DRKWIFSGANDKS 341
+S+D L++ + +R WDVS+G C+ V + A + P D KW+ SG D++
Sbjct: 210 LTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIR-DVSPSFDGKWLVSGGRDQA 268
Query: 342 ICMWELGGKE 351
I +WE+ E
Sbjct: 269 ITVWEVSSAE 278
Score = 100 (40.3 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
F+A+G+ D + +W A LI L GH V + ++P ++ S SDD+TIR W L
Sbjct: 322 FVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLF-SVSDDKTIRCWDL 378
Score = 90 (36.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 38/170 (22%), Positives = 72/170 (42%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
PS T L H D V + F LAS S D + IW+ +L ++ L GH + V
Sbjct: 104 PSST-HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELG---EIERTLKGHIRGV 159
Query: 280 SCVSWSSD--DQQLLTCGVEEAVRRWDVSSGNC-LHVYEKAGLGLVSCGWHPDR-KWIFS 335
S + + + L +C + ++ WD S + + S + + S
Sbjct: 160 SGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLIS 219
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
+ D ++ +W++ G ++ K I D+ + DGK +++ ++ A+
Sbjct: 220 ASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAI 269
Score = 76 (31.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 270 HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK--AGLGLVSCGWH 327
H L+ H+ V+CV++ L + + ++ WD G + G+ + G
Sbjct: 108 HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 328 PDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEV------TSDGKQIITMCKE 381
+ S ++D +I +W+ K+ + RTL D V TS+ +I+ ++
Sbjct: 168 KGNTLLASCSSDLTIKLWD-PSKD---YANIRTLSGHDHSVSSVRFLTSNDNHLISASRD 223
Query: 382 SALLLLDREA----KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG-EVKLV 436
L + D KV + E I S S D K+L+ +Q I +W + E K
Sbjct: 224 GTLRIWDVSTGFCVKVIKSATESW-IRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPK-- 280
Query: 437 AKYKGHK 443
A GH+
Sbjct: 281 AALLGHE 287
Score = 65 (27.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 413 KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQV 470
+F+ ++ I LW G +L+ GH +V F GG ++ S S+D +
Sbjct: 321 EFVATGARDKTIKLWEARG--RLIKTLHGH--DNWVRGLVFHPGG---KYLFSVSDDKTI 373
Query: 471 YIWHRASCD-LIGALPG-HSGAVNCVSWNPA 499
W + L+ + G H V+C+ W P+
Sbjct: 374 RCWDLSQEGRLVKTISGAHEHFVSCIRWAPS 404
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 504 LASASDDRTIRIWGLKDLNVKRKDCHSNGV 533
+A+ + D+TI++W + +K H N V
Sbjct: 323 VATGARDKTIKLWEARGRLIKTLHGHDNWV 352
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 146 (56.5 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 43/130 (33%), Positives = 65/130 (50%)
Query: 227 LQGHTDEVWFLQFS-HNGK-YLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
L+GH V L + G LAS S+D + +W D + LSGH VS V +
Sbjct: 152 LKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLW--DPSKDYANIRTLSGHDHSVSSVRF 209
Query: 285 -SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHP--DRKWIFSGANDKS 341
+S+D L++ + +R WDVS+G C+ V + A + P D KW+ SG D++
Sbjct: 210 LTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIR-DVSPSFDGKWLVSGGRDQA 268
Query: 342 ICMWELGGKE 351
I +WE+ E
Sbjct: 269 ITVWEVSSAE 278
Score = 100 (40.3 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
F+A+G+ D + +W A LI L GH V + ++P ++ S SDD+TIR W L
Sbjct: 322 FVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRGLVFHPGGKYLF-SVSDDKTIRCWDL 378
Score = 90 (36.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 38/170 (22%), Positives = 72/170 (42%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
PS T L H D V + F LAS S D + IW+ +L ++ L GH + V
Sbjct: 104 PSST-HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELG---EIERTLKGHIRGV 159
Query: 280 SCVSWSSD--DQQLLTCGVEEAVRRWDVSSGNC-LHVYEKAGLGLVSCGWHPDR-KWIFS 335
S + + + L +C + ++ WD S + + S + + S
Sbjct: 160 SGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLIS 219
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
+ D ++ +W++ G ++ K I D+ + DGK +++ ++ A+
Sbjct: 220 ASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAI 269
Score = 76 (31.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/187 (23%), Positives = 77/187 (41%)
Query: 270 HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK--AGLGLVSCGWH 327
H L+ H+ V+CV++ L + + ++ WD G + G+ + G
Sbjct: 108 HTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQ 167
Query: 328 PDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEV------TSDGKQIITMCKE 381
+ S ++D +I +W+ K+ + RTL D V TS+ +I+ ++
Sbjct: 168 KGNTLLASCSSDLTIKLWD-PSKD---YANIRTLSGHDHSVSSVRFLTSNDNHLISASRD 223
Query: 382 SALLLLDREA----KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG-EVKLV 436
L + D KV + E I S S D K+L+ +Q I +W + E K
Sbjct: 224 GTLRIWDVSTGFCVKVIKSATESW-IRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPK-- 280
Query: 437 AKYKGHK 443
A GH+
Sbjct: 281 AALLGHE 287
Score = 65 (27.9 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 413 KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQV 470
+F+ ++ I LW G +L+ GH +V F GG ++ S S+D +
Sbjct: 321 EFVATGARDKTIKLWEARG--RLIKTLHGH--DNWVRGLVFHPGG---KYLFSVSDDKTI 373
Query: 471 YIWHRASCD-LIGALPG-HSGAVNCVSWNPA 499
W + L+ + G H V+C+ W P+
Sbjct: 374 RCWDLSQEGRLVKTISGAHEHFVSCIRWAPS 404
Score = 47 (21.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 504 LASASDDRTIRIWGLKDLNVKRKDCHSNGV 533
+A+ + D+TI++W + +K H N V
Sbjct: 323 VATGARDKTIKLWEARGRLIKTLHGHDNWV 352
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 202 (76.2 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 77/314 (24%), Positives = 142/314 (45%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
I S LQ + H+ V L + G+ LA+ D IW V + L+GH
Sbjct: 8 ITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIM---SLTGHTS 64
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA 337
V C+ ++S +++++ + ++R WD+ + L + S +HP +++ SG+
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGS 124
Query: 338 NDKSICMWELGGKELEC-WKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVER 395
D +I +W++ K +KG T + L + DGK + + +S + L D A K+
Sbjct: 125 VDSNIKLWDVRRKGCVFRYKGH-TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMIT 183
Query: 396 YIEEDQTITSFSLSRDNKFLLVN-LLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
+ + N++LL + ++ + LW++E + ++ +G V+RS
Sbjct: 184 EFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLE-KFNMIGSSEGETG---VVRSVLF 239
Query: 455 GLEQAFIASGSEDS-QVYIWHRASC-DLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
+ + + SGSE++ +VY W C D++ H G +N M+A S T
Sbjct: 240 NPDGSCLYSGSENTLRVYGWEPDRCFDVV-----HVGWGKVSDLAISNNQMIA-VSYSHT 293
Query: 513 IRIWGLKDLN-VKR 525
W + DLN VK+
Sbjct: 294 NVSWYVVDLNRVKK 307
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 179 (68.1 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 44/117 (37%), Positives = 60/117 (51%)
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEG-EVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
+ SL L N + I+++NI G + VA + GH S F ++S +Q F+A
Sbjct: 270 SGLSLDYTGSRLFSNCTDDNIYMFNISGLKTTPVAVFSGHSNSSFYVKSTVSPDDQ-FLA 328
Query: 463 SGSEDSQVYIWHRASCDLIGA-LPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
SGS D VYIW + L GHS V V+W P + +AS SDD T+RIW L
Sbjct: 329 SGSSDHNVYIWKISDPKQAPMMLQGHSQEVTSVAWCPTDFTKIASCSDDNTVRIWRL 385
Score = 69 (29.3 bits), Expect = 9.1e-13, Sum P(2) = 9.1e-13
Identities = 20/85 (23%), Positives = 42/85 (49%)
Query: 221 SRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVS 280
S L+ Q H + V+ + + L ++S D++A +W+V + G + K GHQ +
Sbjct: 87 SSVLKEWQAHDNAVFDIAWVPGTNCLVTASGDQTARLWDV-ITGDLLGTFK--GHQCSLK 143
Query: 281 CVSWSSDDQQLLTCGVEEA-VRRWD 304
V++ ++ + + G + + WD
Sbjct: 144 SVAFYKQEKAVFSTGGRDGNIMIWD 168
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 208 (78.3 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 71/273 (26%), Positives = 136/273 (49%)
Query: 266 VTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLH-VYEKA-----GL 319
+ L H L H V CV +S++ + L T G +A +DV +G L ++E++ L
Sbjct: 304 INLVHTLE-HPSVVCCVKFSNNGKYLAT-GCNQAANVFDVQTGKKLFTLHEESPDPSRDL 361
Query: 320 GLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMC 379
+ + + PD K++ +G D+ I +W+L +++ I L+ + +G+ I++
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS 421
Query: 380 KESALLLLDREA-KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK 438
+ L D E + +E + +T+ ++S +++F+ V L+Q I +W++ G LV +
Sbjct: 422 GDRTARLWDVETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGT--LVER 479
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIG--AL-P---------G 486
+GHK S + I F + + + SGS D + +W + +G A+ P G
Sbjct: 480 LEGHKESVYSI--AFSP-DSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
H+ V V+ +P + L S S DR+++ W L+
Sbjct: 537 HTDFVLSVAVSPDSRWGL-SGSKDRSMQFWDLQ 568
Score = 193 (73.0 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 78/310 (25%), Positives = 142/310 (45%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS---GHQKPVSCVSWSS 286
H V ++FS+NGKYLA+ N ++A +++V + H+ S V +++S
Sbjct: 312 HPSVVCCVKFSNNGKYLATGCN-QAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + L+T + ++ WD+S+ +V+ + S + + ++I SG+ D++ +W+
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 347 LG-GK---ELECWKGQRTLKIS-DLEVTSDGK--QIITMCKESALLLLDREAKVERYIEE 399
+ G+ +LE G + IS + + + G QII + S L VER
Sbjct: 431 VETGQCILKLEIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTL-------VERLEGH 483
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE-------VK----LVAKYKGHKRSRFV 448
+++ S + S D+ LL L++ I +W ++ +K A Y GH + FV
Sbjct: 484 KESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGH--TDFV 541
Query: 449 IRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASAS 508
+ S + + SGS+D + W + GH +V V ++P + AS S
Sbjct: 542 L-SVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP-DGRQFASGS 599
Query: 509 DDRTIRIWGL 518
D RIW +
Sbjct: 600 GDLRARIWSI 609
Score = 182 (69.1 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 39/122 (31%), Positives = 69/122 (56%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ GH +++ L FSHNG+++ S S DR+A +W+V+ G LK ++ + V+ ++ S
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVE-TGQCILKLEI---ENGVTAIAIS 452
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
+DQ + +++ +R W VS G + E + S + PD + SG+ DK+I +W
Sbjct: 453 PNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVW 511
Query: 346 EL 347
EL
Sbjct: 512 EL 513
Score = 135 (52.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/176 (24%), Positives = 84/176 (47%)
Query: 366 LEVTSDGKQIITMCKESALLL-LDREAKVERYIEE------DQTITSFSLSRDNKFLLVN 418
++ +++GK + T C ++A + + K+ EE D + + + S D K+L+
Sbjct: 319 VKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTG 378
Query: 419 LLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASC 478
+++I LW++ + K+ + GH++ + + G FI SGS D +W +
Sbjct: 379 TEDRQIKLWDLSTQ-KVRYVFSGHEQDIYSLDFSHNG---RFIVSGSGDRTARLWDVETG 434
Query: 479 DLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDCHSNGVH 534
I L +G V ++ +P N +A S D+ IR+W + V+R + H V+
Sbjct: 435 QCILKLEIENG-VTAIAISP-NDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVY 488
Score = 37 (18.1 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 105 DAEKVMDALKTLRAE 119
DA KV + L L+AE
Sbjct: 6 DATKVQEMLDALKAE 20
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 64/260 (24%), Positives = 128/260 (49%)
Query: 239 FSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEE 298
FS +GKYLA+ + D+ +W++ T++ + +GH++ + + ++ D + + + +
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDITTR---TIRIQFAGHEQDIYSLDFARDGRTIASGSGDR 410
Query: 299 AVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKG 357
VR WD+ +G L V+ G+ + PD K++ +G+ DKS+ +W+L G +E +G
Sbjct: 411 TVRLWDIENGTALTVFTIED-GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEG 469
Query: 358 QRTLKISDLEV--TSDGKQIITMCKESALLLLD----------REAKVERYIEEDQT--- 402
K S V + +G+ ++T + + L + + +K R ++ +
Sbjct: 470 PDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRD 529
Query: 403 -ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRF-VIRSCFGGLEQA 459
+ S +L+ DN++++ ++ + W+ G +L+ + GHK S V S GG
Sbjct: 530 FVLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQ--GHKNSVISVAPSPTGG---- 583
Query: 460 FIASGSEDSQVYIWHRASCD 479
F A+GS D + IW D
Sbjct: 584 FFATGSGDMRARIWSYTRMD 603
Score = 180 (68.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 68/273 (24%), Positives = 126/273 (46%)
Query: 266 VTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAG----L 319
V L H L H+ V CV +S+D + + T G + + +DV++G C+ + A L
Sbjct: 290 VDLVHTLQ-HESVVCCVRFSADGKYVAT-GCNRSAQIFDVNTGEKVCVLQDDNADTTGDL 347
Query: 320 GLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMC 379
+ S + PD K++ +GA DK I +W++ + + I L+ DG+ I +
Sbjct: 348 YIRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGS 407
Query: 380 KESALLLLDRE--AKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EG-EVKL 435
+ + L D E + + ED +T+ ++S D K++ L++ + +W++ +G V+
Sbjct: 408 GDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVER 466
Query: 436 VAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWH----RASCDLIGA-------- 483
+ GHK S + + G + + +GS D + +W R + G+
Sbjct: 467 LEGPDGHKDSVYSVAFSPNGRD---LVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKT 523
Query: 484 LPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
GH V V+ P N ++ S S DR ++ W
Sbjct: 524 FEGHRDFVLSVALTPDNQWVM-SGSKDRGVQFW 555
Score = 169 (64.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 71/307 (23%), Positives = 137/307 (44%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP---VSCVSWSS 286
H V ++FS +GKY+A+ N RSA I++V+ V + + + V +S
Sbjct: 298 HESVVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + L T ++ +R WD+++ + + S + D + I SG+ D+++ +W+
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 347 L-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REAKVERYIEED--- 400
+ G L + + ++ + ++ D K + + ++ + D + VER D
Sbjct: 417 IENGTALTVFTIEDG--VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHK 474
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNI---EGEV--------KLVAKYKGHKRSRFVI 449
++ S + S + + L+ L++ I LW + G + + V ++GH+ FV+
Sbjct: 475 DSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRD--FVL 532
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD 509
Q ++ SGS+D V W + L GH +V V+ +P A+ S
Sbjct: 533 SVALTPDNQ-WVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGG-FFATGSG 590
Query: 510 DRTIRIW 516
D RIW
Sbjct: 591 DMRARIW 597
Score = 153 (58.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 51/229 (22%), Positives = 111/229 (48%)
Query: 219 IPSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
I +RT++I GH +++ L F+ +G+ +AS S DR+ +W+++ NG + +
Sbjct: 375 ITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIE-NGTALTVFTI---ED 430
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA-GL--GLVSCGWHPDRKWIF 334
V+ V+ S D + + ++++VR WD++ G + E G + S + P+ + +
Sbjct: 431 GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLV 490
Query: 335 SGANDKSICMWEL-------------GGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
+G+ DK+I +WEL GG+ ++ ++G R +S + +T D + +++ K+
Sbjct: 491 TGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLS-VALTPDNQWVMSGSKD 549
Query: 382 SALLLLD-REAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
+ D R + ++ ++ S + S F + +W+
Sbjct: 550 RGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWS 598
Score = 122 (48.0 bits), Expect = 0.00040, P = 0.00040
Identities = 49/210 (23%), Positives = 92/210 (43%)
Query: 321 LVSC-GWHPDRKWIFSGANDKSICMWELGGKELEC-WKGQRTLKISDLEVTS-----DGK 373
+V C + D K++ +G N +S ++++ E C + DL + S DGK
Sbjct: 301 VVCCVRFSADGKYVATGCN-RSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGK 359
Query: 374 QIITMCKESALLLLDREAKVER--YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG 431
+ T ++ + + D + R + +Q I S +RD + + ++ + LW+IE
Sbjct: 360 YLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIEN 419
Query: 432 EVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS-CDL--IGALPGHS 488
L + I + ++A+GS D V +W C + + GH
Sbjct: 420 GTALTVFTIEDGVTTVAISP-----DTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHK 474
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIWGL 518
+V V+++P N L + S D+TI++W L
Sbjct: 475 DSVYSVAFSP-NGRDLVTGSLDKTIKLWEL 503
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 199 (75.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 71/328 (21%), Positives = 130/328 (39%)
Query: 199 HNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHN-GKYLASSSNDRSAII 257
H D D+ L + + IP + + + HT + L F N G L S S D + I
Sbjct: 218 HVPQDLDIDLRKEPGSTTNYIPKKMVHQWKHHTKAITSLNFFPNSGHLLLSGSADSTVKI 277
Query: 258 WEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA 317
W+V L SGH K +S ++++ + L+ + ++ WD +G C+ +
Sbjct: 278 WDVYHQR--ELLRTYSGHSKSLSDTTFNTHGDKFLSASFDRMMKLWDTETGKCIAKFTTG 335
Query: 318 GLGLVSCGWHPDRKW---IFSGANDKSICMWEL-GGKELECWKGQRTLKISDLEVTSDGK 373
V ++P + +G +D I ++ G E ++ + DG+
Sbjct: 336 KTPHV-VRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEYDHHLGPVNTITFCDDGR 394
Query: 374 QIITMCKESALLLLDREAKVE-RYIEEDQ--TITSFSLSRDNKFLLVNLLNQEIHLWNIE 430
+ +T + L + V +YI E +T + K++ + +I +++
Sbjct: 395 RFMTTSDDRTLRAWEYGFGVPIKYIAEPYLFAMTRAATHPSGKYVAYQSSDNQIVVYSSN 454
Query: 431 GEVKLVAK--YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ + K Y+GH + I Q F+ASG V W SC + +
Sbjct: 455 DKFRQNRKKSYRGHNNAGSAIDIDISADGQ-FLASGDTGGYVAFWDWKSCKMFHKIQVED 513
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIW 516
G V+CV W+P +A+ I+ W
Sbjct: 514 GQVSCVKWHPQESSKVATGGASGIIKFW 541
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 140 (54.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH V + +S G YLAS+S D + IW+ + + + L GH+ V V+W+
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT-TLEGHENEVKSVAWAPS 116
Query: 288 DQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
L TC +++V W+V + C+ V + WHP ++ + S + D ++ +
Sbjct: 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKL 176
Query: 345 WELGGKELEC 354
++ G + C
Sbjct: 177 YQEEGDDWVC 186
Score = 140 (54.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 63/247 (25%), Positives = 99/247 (40%)
Query: 230 HTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCVSWSSD 287
H D WFL ++ +G LAS DR IW + + + K LS GHQ+ V V+WS
Sbjct: 14 HPDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWIC-KSVLSEGHQRTVRKVAWSPC 72
Query: 288 DQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
L + + W + + C+ E + S W P + + + DKS+ +W
Sbjct: 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW 132
Query: 346 ELGGK-ELECWKGQRTLKISDLEV-TSDGKQIITMCKESALLLLDREAKVERYIEEDQTI 403
E+ + E EC +S L T D K ++ + L + V+ Y EE
Sbjct: 133 EVDEEDEYEC--------VSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEG--- 181
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNI--EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
D+ L E +W+I + + +A + R + R G EQ
Sbjct: 182 -------DDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVR-IWRQYLPGNEQGVA 233
Query: 462 ASGSEDS 468
SGS+ S
Sbjct: 234 CSGSDPS 240
Score = 123 (48.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH +EV + ++ +G LA+ S D+S +WEVD LS H + V V W
Sbjct: 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHP 160
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+ L + ++ V+ + + C E + S + P + + S ++D+++ +
Sbjct: 161 SQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRI 220
Query: 345 WE--LGGKE 351
W L G E
Sbjct: 221 WRQYLPGNE 229
Score = 104 (41.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 56/255 (21%), Positives = 103/255 (40%)
Query: 262 LNGGVTLKHKLSGHQKPVS-C--VSWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEK 316
+ + L+ ++ H P S C ++W+ L +CG + +R W + C V +
Sbjct: 1 MKDSLVLQSRVPAH--PDSRCWFLAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSE 58
Query: 317 AGLGLV-SCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS----- 370
V W P ++ S + D + C+W+ + EC TL+ + EV S
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC---VTTLEGHENEVKSVAWAP 115
Query: 371 DGKQIITMCKESALLL--LDREAKVERYI---EEDQTITSFSLSRDNKFLLVNLLNQEIH 425
G + T ++ ++ + +D E + E Q + + L + +
Sbjct: 116 SGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 426 LWNIEGEVKLV-AKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL 484
L+ EG+ + A +GH+ + + I F Q +AS S+D V IW + L
Sbjct: 176 LYQEEGDDWVCCATLEGHESTVWSI--AFDPSGQR-LASCSDDRTVRIWRQY-------L 225
Query: 485 PGHSGAVNCVSWNPA 499
PG+ V C +P+
Sbjct: 226 PGNEQGVACSGSDPS 240
Score = 100 (40.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
HS VNCV+WNP P +LAS SDD + W
Sbjct: 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 87 (35.7 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 43/177 (24%), Positives = 79/177 (44%)
Query: 204 RDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
RD S++ D+ + +L HT +V + + + + LAS+S D + +++ + +
Sbjct: 125 RDKSVWVWEVDEEDEY--ECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGD 182
Query: 264 GGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW-DVSSGNCLHVYEKAGLGLV 322
V L GH+ V +++ Q+L +C + VR W GN E+ G+
Sbjct: 183 DWVCCA-TLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGN-----EQ---GVA 233
Query: 323 SCGWHPDRKWI--FSGANDKSI--CMW-ELGGKELECWKGQRTLKISDLEVTSDGKQ 374
G P K I SG + ++I W +L G L G +++ + + SD +Q
Sbjct: 234 CSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGA-LATACGDDAIRVFEEDPGSDPQQ 289
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 457 EQAFIASGSEDSQVYIW 473
E +AS S+D +V W
Sbjct: 315 EPGLLASCSDDGEVAFW 331
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 198 (74.8 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 49/157 (31%), Positives = 84/157 (53%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGV-TLKHKLSGHQKPVS 280
R L++ GHTD V + S N Y+ SSS D +A +W +D H L GH V+
Sbjct: 294 RPLKVYFGHTDNVLGVVVSEN--YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVN 351
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
V +SS ++T + +R WD+++G+C+ + G ++C + + K+I SG++D
Sbjct: 352 SVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG-IACAQY-NGKFIVSGSSDL 409
Query: 341 SICMWELG-GKELECWKGQ----RTLKISDLEVTSDG 372
+I ++E GK L +G RT++ +D ++ S G
Sbjct: 410 TIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGG 446
Score = 137 (53.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 70/302 (23%), Positives = 132/302 (43%)
Query: 242 NGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVR 301
+G++L S+ N+ S I + D + TL V CV + DD+ +++ + V
Sbjct: 196 HGRFLVSTFNNPS-IRFPADQDFRATLDS--------VYCVQY--DDEIMVSGSKDRTVS 244
Query: 302 RWDVSSGNCLH-VYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRT 360
WDV+S L+ +Y +G ++ + R + SG++D +I +W+ W+ +R
Sbjct: 245 VWDVNSRFILYKLYGHSG-SVLCLDFCRRRNLLVSGSSDSTIIIWD--------WQNRRP 295
Query: 361 LKI----SD--LEVTSDGKQIITMCKESALLL--LDREAKVERYIEEDQ----TITSFSL 408
LK+ +D L V II+ ++ + LD + E + + ++ S
Sbjct: 296 LKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQY 355
Query: 409 SRDNKFLLVNLLNQEIHLWNIE-GE-VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSE 466
S ++ ++ + W+I G ++++ H R + + + G FI SGS
Sbjct: 356 SSKTGLIVTASSDRTLRTWDITTGHCIRII-----HAHQRGIACAQYNG---KFIVSGSS 407
Query: 467 DSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
D + I+ +S L+ L GH + V +N + S D T+RIW + N +
Sbjct: 408 DLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK---IVSGGYDGTVRIW---NFNTGEQ 461
Query: 527 DC 528
C
Sbjct: 462 HC 463
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 82/318 (25%), Positives = 143/318 (44%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT-LKHKLSGHQKP---------- 278
H+ V ++FS +GK++A+ N ++ ++ V V L + S K
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCN-KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+ V +S D + L T ++ +R WD+S+ + + + S + PD + SG+
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 339 DKSICMWELGGKELECWKGQRTLKISD----LEVTSDGKQIITMCKESALLLLDREAK-- 392
D+S+ +W+L + +C TL I D + V+ DGK I + + + D
Sbjct: 318 DRSVRIWDL--RTSQC---SLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFL 372
Query: 393 VERYIE-------EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG--EVKLVAK--YKG 441
VER + ++ S + S + + + L++ + LW++EG + K + Y G
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIG 432
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN--CVSWNPA 499
HK FV+ C + +I SGS+D V W +AS + + L GH +V VS N
Sbjct: 433 HKD--FVLSVCCTP-DNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSK 489
Query: 500 NPH-MLASASDDRTIRIW 516
+ A+ S D RIW
Sbjct: 490 GTEGIFATGSGDCKARIW 507
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/187 (25%), Positives = 91/187 (48%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNG-GVTLKHKLSGH 275
D R ++IL+GH +++ L F +G L S S DRS IW++ + +TL + G
Sbjct: 283 DLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-DG- 340
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA---GLG----LVSCGWHP 328
V+ V+ S D + + ++ VR WD ++G + + G G + S +
Sbjct: 341 ---VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN 397
Query: 329 DRKWIFSGANDKSICMWELGGK---ELEC---WKGQRTLKISDLEVTSDGKQIITMCKES 382
+ + I SG+ D+++ +W L GK + C + G + +S + T D + I++ K+
Sbjct: 398 NGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLS-VCCTPDNEYILSGSKDR 456
Query: 383 ALLLLDR 389
++ D+
Sbjct: 457 GVIFWDQ 463
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 82/318 (25%), Positives = 143/318 (44%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT-LKHKLSGHQKP---------- 278
H+ V ++FS +GK++A+ N ++ ++ V V L + S K
Sbjct: 199 HSSVVCCVRFSRDGKFIATGCN-KTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLY 257
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+ V +S D + L T ++ +R WD+S+ + + + S + PD + SG+
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 339 DKSICMWELGGKELECWKGQRTLKISD----LEVTSDGKQIITMCKESALLLLDREAK-- 392
D+S+ +W+L + +C TL I D + V+ DGK I + + + D
Sbjct: 318 DRSVRIWDL--RTSQC---SLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFL 372
Query: 393 VERYIE-------EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG--EVKLVAK--YKG 441
VER + ++ S + S + + + L++ + LW++EG + K + Y G
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIG 432
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVN--CVSWNPA 499
HK FV+ C + +I SGS+D V W +AS + + L GH +V VS N
Sbjct: 433 HKD--FVLSVCCTP-DNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSK 489
Query: 500 NPH-MLASASDDRTIRIW 516
+ A+ S D RIW
Sbjct: 490 GTEGIFATGSGDCKARIW 507
Score = 132 (51.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/187 (25%), Positives = 91/187 (48%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNG-GVTLKHKLSGH 275
D R ++IL+GH +++ L F +G L S S DRS IW++ + +TL + G
Sbjct: 283 DLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-DG- 340
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA---GLG----LVSCGWHP 328
V+ V+ S D + + ++ VR WD ++G + + G G + S +
Sbjct: 341 ---VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSN 397
Query: 329 DRKWIFSGANDKSICMWELGGK---ELEC---WKGQRTLKISDLEVTSDGKQIITMCKES 382
+ + I SG+ D+++ +W L GK + C + G + +S + T D + I++ K+
Sbjct: 398 NGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLS-VCCTPDNEYILSGSKDR 456
Query: 383 ALLLLDR 389
++ D+
Sbjct: 457 GVIFWDQ 463
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 189 (71.6 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 49/163 (30%), Positives = 87/163 (53%)
Query: 368 VTSDGKQIITMCKESALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHL 426
V+SDG I C + ++ ++ V+ IE E T+T+ +LS D+K L +++I +
Sbjct: 27 VSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 427 WNIEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQVYIWHRASCDLIGAL 484
W++E +K + +KGH+ + +C GGL +A+ D +V +W
Sbjct: 87 WDLE-TLKCIRSWKGHE-GPVMGMACHASGGL----LATAGADRKVLVWDVDGGFCTHYF 140
Query: 485 PGHSGAVNCVSWNP-ANPHMLASASDDRTIRIWGLKDLNVKRK 526
GH G V+ + ++P +N ++L S SDD T+R+W L N ++K
Sbjct: 141 RGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKK 183
Score = 162 (62.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 47/181 (25%), Positives = 85/181 (46%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK--HKLSG 274
D S ++G +D + L S + K L S+ + R +W+++ TLK G
Sbjct: 46 DSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLE-----TLKCIRSWKG 100
Query: 275 HQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPD--RK 331
H+ PV ++ + L T G + V WDV G C H Y + G+VS +HPD +
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTH-YFRGHKGVVSSILFHPDSNKN 159
Query: 332 WIFSGANDKSICMWELGGKELE--CWK--GQRTLKISDLEVTSDGKQIITMCKESALLLL 387
+ SG++D ++ +W+L K E C + ++ + ++ DG + + ++ + L
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Query: 388 D 388
D
Sbjct: 220 D 220
Score = 151 (58.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 201 SSDRDMSLYTDHQCGRDQ---IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAII 257
S DR + +++ D I +T ++ H ++ + + N + + S DR+A I
Sbjct: 466 SGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASI 525
Query: 258 WEV-DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK 316
W + DL VTLK GH++ + V +S+ DQ ++T ++ V+ W +S G+CL +E
Sbjct: 526 WRLPDLVHVVTLK----GHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEG 581
Query: 317 AGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQII 376
++ + D S D + +W + E Q K+ L V + I
Sbjct: 582 HTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIA 641
Query: 377 TMCKESALLLL-DREA--KVERYIEEDQTI 403
T ++ + L D A K + + +E++ I
Sbjct: 642 TGGGDAVINLWHDSTASDKEDDFRKEEEAI 671
Score = 148 (57.2 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH V + +G LA++ DR ++W+VD GG H GH+ VS + + D
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVD--GGFCT-HYFRGHKGVVSSILFHPD 155
Query: 288 -DQQLLTCGVEEA-VRRWDVSSGN----CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
++ +L G ++A VR WD+++ N CL + EK + S D +FS DK
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 342 ICMWEL 347
+ +W+L
Sbjct: 216 VNLWDL 221
Score = 136 (52.9 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 72/319 (22%), Positives = 134/319 (42%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ--KPV 279
+ L I++ H V + S +G L S+ D+ +W DL+ + K ++ ++ + V
Sbjct: 183 KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW--DLHD-YSCKATVATYEVLEAV 239
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAND 339
+ VS S +++ + S + G+V R W G
Sbjct: 240 TTVS-SGTPFASFVASLDQKKSKKKESDSQATYFITVGERGVV-------RIWKSEG--- 288
Query: 340 KSICMWELGGKEL-------ECWKGQRTLKI--SD---LEVTSDGK----QIITMCKESA 383
SIC++E ++ E +G + SD L VT+D + ++ +E+
Sbjct: 289 -SICLYEQKSSDITVSSDDEESKRGFTAAAMLPSDHGLLCVTADQQFFFYSVVENVEETE 347
Query: 384 LLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
L+L R + Y EE + F L + +FL V +E+ ++++ + GHK
Sbjct: 348 LVLSKR---LVGYNEEIADM-KF-LGDEEQFLAVATNLEEVRVYDV-ATMSCSYVLAGHK 401
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
+ +C I +GS+D V +W+ S IG GH+G + V++ +
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSF 461
Query: 504 LASASDDRTIRIWGLKDLN 522
S S DRT+++W L ++
Sbjct: 462 FVSGSGDRTLKVWSLDGIS 480
Score = 89 (36.4 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 39/190 (20%), Positives = 89/190 (46%)
Query: 357 GQRTLKIS-DLEVTSDGKQ-IITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDN 412
G + + +S D V+S G I+T K+ + L + +K + + I + + ++ +
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS 458
Query: 413 -KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV-------IRSCFGGLEQAFIASG 464
F + ++ + +W+++G + ++ + ++R V I S + + +G
Sbjct: 459 FSFFVSGSGDRTLKVWSLDG-ISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTG 517
Query: 465 SEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-V 523
SED IW + L GH + V ++ + ++ +AS D+T++IW + D + +
Sbjct: 518 SEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM-TASGDKTVKIWAISDGSCL 576
Query: 524 KRKDCHSNGV 533
K + H++ V
Sbjct: 577 KTFEGHTSSV 586
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/201 (27%), Positives = 95/201 (47%)
Query: 327 HPDRKWIFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKE 381
+PD I S + DKSI MW+L E QR+LK +SD+ ++SDG+ ++ +
Sbjct: 27 YPDM--ILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWD 84
Query: 382 SALLLLDREAKV--ERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY 439
L L D + R++ + + S + S DN+ ++ ++ I LWN G K +
Sbjct: 85 GTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQD 144
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPA 499
+GH +R ++ G D V +W+ A+C L GH+G +N V+ +P
Sbjct: 145 EGHTEWVSCVRFSPNSSNPIIVSCGW-DKMVKVWNLANCKLKTNHIGHTGYLNTVTVSP- 202
Query: 500 NPHMLASASDDRTIRIWGLKD 520
+ + AS D +W L +
Sbjct: 203 DGSLCASGGKDGQAMLWDLNE 223
Score = 172 (65.6 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 62/242 (25%), Positives = 118/242 (48%)
Query: 201 SSDRDMSLYTDHQCGRDQ----IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
S+ RD S+ + RD+ IP R+L+ GH+ V + S +G++ S + D +
Sbjct: 33 SASRDKSIIM-WKLTRDETNYGIPQRSLK---GHSHFVSDVVISSDGQFALSGAWDGTLR 88
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK 316
+W DL G+T + + GH K V V++S+D++Q+++ ++ ++ W+ + G C + +
Sbjct: 89 LW--DLTTGLTTR-RFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLGVCKYTIQD 144
Query: 317 AG-LGLVSC-GWHPDRK--WIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDG 372
G VSC + P+ I S DK + +W L +L+ T ++ + V+ DG
Sbjct: 145 EGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDG 204
Query: 373 KQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG 431
+ K+ +L D E K ++ I + S N++ L I +W++EG
Sbjct: 205 SLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFS-PNRYWLCAATGPSIKIWDLEG 263
Query: 432 EV 433
++
Sbjct: 264 KI 265
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 227 LQGHTDEVWFLQFSHNGKY---LASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVS 280
L+GH+ W Q + KY + S+S D+S I+W++ + N G+ + L GH VS
Sbjct: 11 LKGHSG--WVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIP-QRSLKGHSHFVS 67
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
V SSD Q L+ + +R WD+++G + ++S + D + I SG+ DK
Sbjct: 68 DVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 341 SICMWE-LG 348
+I +W LG
Sbjct: 128 TIKLWNTLG 136
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 67/274 (24%), Positives = 111/274 (40%)
Query: 176 IPERRLE---HLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTD 232
IP+R L+ H V ++ + D + L+ D T + GHT
Sbjct: 54 IPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLW-------DLTTGLTTRRFVGHTK 106
Query: 233 EVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS--GHQKPVSCVSWS--SDD 288
+V + FS + + + S S D++ +W L GV K+ + GH + VSCV +S S +
Sbjct: 107 DVLSVAFSADNRQIVSGSRDKTIKLWNT-L--GVC-KYTIQDEGHTEWVSCVRFSPNSSN 162
Query: 289 QQLLTCGVEEAVRRWDVSSGNCL----HVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+++CG ++ V+ W+++ NC H+ L V+ PD SG D +
Sbjct: 163 PIIVSCGWDKMVKVWNLA--NCKLKTNHIGHTGYLNTVTVS--PDGSLCASGGKDGQAML 218
Query: 345 WELG-GKELECW-KGQ--RTLKISDLEV---TSDGKQIITMCKESALLL--LDREAKVER 395
W+L GK L G L S + G I E +++ L +E
Sbjct: 219 WDLNEGKHLYTLDSGDVINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTN 278
Query: 396 YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
E TS + S D + L + I +W +
Sbjct: 279 SKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
++ +S D +F L + + LW++ + ++ GH + V+ F + I
Sbjct: 66 VSDVVISSDGQFALSGAWDGTLRLWDLTTGLT-TRRFVGHTKD--VLSVAFSA-DNRQIV 121
Query: 463 SGSEDSQVYIWHRAS-CDLIGALPGHSGAVNCVSWNP--ANPHMLASASDDRTIRIWGLK 519
SGS D + +W+ C GH+ V+CV ++P +NP ++ S D+ +++W L
Sbjct: 122 SGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNP-IIVSCGWDKMVKVWNLA 180
Query: 520 DLNVKRKDCHSNGVHYCN 537
N K K H Y N
Sbjct: 181 --NCKLKTNHIGHTGYLN 196
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 79/303 (26%), Positives = 128/303 (42%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH+ + + +S G+YLAS+S D + IW+ +G L GH+ V VSWS
Sbjct: 58 GHSRTIRDVAWSPCGQYLASASFDATVAIWDKK-SGEFECNATLEGHENEVKSVSWSKSG 116
Query: 289 QQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
L TC +++V W+V+ + C V + WHP + S + D +I ++
Sbjct: 117 SLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLY 176
Query: 346 ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCK-ESALLLLDREAKVERYIE--EDQT 402
KE DL SD T+ ES + + + R +DQT
Sbjct: 177 ----KE-------------DL-ADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQT 218
Query: 403 ITSFSLSRD-NKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ + + N+F + N + W V +A Y H RS + I C + +
Sbjct: 219 VKIWQEYKPGNEFGVSCPDNTPV--WKC---VCTLAGY--HSRSVYDISWC---KQSGLL 268
Query: 462 ASGSEDSQVYIW--------HRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
A+ D V I+ H + +++G+ HS VN V WNP +L + SDD +
Sbjct: 269 ATACGDDMVRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDV 328
Query: 514 RIW 516
++W
Sbjct: 329 KLW 331
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 40/135 (29%), Positives = 58/135 (42%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCV 282
LQ L GH W + G LA+ D++ IW D + K LS GH + + V
Sbjct: 7 LQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDV 66
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+WS Q L + + V WD SG C E + S W + + + DK
Sbjct: 67 AWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDK 126
Query: 341 SICMWELGGK-ELEC 354
S+ +WE+ + E EC
Sbjct: 127 SVWVWEVAQEDEYEC 141
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 189 (71.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 57/197 (28%), Positives = 95/197 (48%)
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLL 387
I S + DKSI +W+L + QR L + D+ ++SDG+ ++ + L L
Sbjct: 31 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 388 DREAKVE--RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY--KGHK 443
D A V R++ + + S + S DN+ ++ ++ I LWN GE K +GH+
Sbjct: 91 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHR 150
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
+R L Q I S S D V +W+ ++C L L GH+G V+ V+ +P + +
Sbjct: 151 DWVSCVRFSPNTL-QPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP-DGSL 208
Query: 504 LASASDDRTIRIWGLKD 520
AS D + +W L +
Sbjct: 209 CASGGKDGVVLLWDLAE 225
Score = 184 (69.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S+ RD S+ D+ + L GH+ V + S +G++ S S D +W
Sbjct: 33 SASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW-- 90
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG 320
DL GV+ + + GH K V V++S D++Q+++ + ++ W+ + G C + + G G
Sbjct: 91 DLAAGVSTR-RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISEGGEG 148
Query: 321 ---LVSC-GWHPD--RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQ 374
VSC + P+ + I S + DK++ +W L +L T +S + V+ DG
Sbjct: 149 HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSL 208
Query: 375 IITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE 432
+ K+ +LL D E K +E + I + S N++ L I +W++E +
Sbjct: 209 CASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFS-PNRYWLCAATEHGIKIWDLESK 266
Score = 139 (54.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 52/185 (28%), Positives = 85/185 (45%)
Query: 176 IPERRL---EHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTD 232
+ +RRL H VE ++ S D ++ L+ D G + +R GHT
Sbjct: 54 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW-DLAAG---VSTRRFV---GHTK 106
Query: 233 EVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQ-- 290
+V + FS + + + S+S DR+ +W T+ GH+ VSCV +S + Q
Sbjct: 107 DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 166
Query: 291 LLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC-GWHPDRKWIFSGANDKSICMWELG 348
+++ ++ V+ W++S NC AG G VS PD SG D + +W+L
Sbjct: 167 IVSASWDKTVKVWNLS--NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 224
Query: 349 -GKEL 352
GK+L
Sbjct: 225 EGKKL 229
Score = 125 (49.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/128 (28%), Positives = 64/128 (50%)
Query: 227 LQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVSCV 282
++ HTD V + N + S+S D+S I+W++ D GV + +L+GH V V
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVA-QRRLTGHSHFVEDV 69
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SSD Q L+ + +R WD+++G + ++S + D + I S + D++I
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 129
Query: 343 CMWELGGK 350
+W G+
Sbjct: 130 KLWNTLGE 137
Score = 121 (47.7 bits), Expect = 0.00019, P = 0.00019
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 408 LSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSED 467
LS D +F L + E+ LW++ V ++ GH + V+ F L+ I S S D
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVS-TRRFVGHTKD--VLSVAFS-LDNRQIVSASRD 126
Query: 468 SQVYIWHR-ASCD--LIGALPGHSGAVNCVSWNPANPH-MLASASDDRTIRIWGLKDLNV 523
+ +W+ C + GH V+CV ++P + SAS D+T+++W L + +
Sbjct: 127 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 524 K 524
+
Sbjct: 187 R 187
Score = 48 (22.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 466 EDSQVYIWHRAS-CDLIGALPGHSGAVNCVSWN-PANPHMLASASDDRTIRIWGL 518
ED +V + A D G + C S N A+ L S D IR+WG+
Sbjct: 270 EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 324
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 164 (62.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 40/118 (33%), Positives = 61/118 (51%)
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEG-EVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
+S L L N + I+++N+ + VA + GH+ S F I+S +Q F+
Sbjct: 272 SSLVLDSTGANLFANCTDDSIYMFNMTSLKTFPVAVFSGHQNSTFYIKSSISPDDQ-FLV 330
Query: 463 SGSEDSQVYIWHRASCDLIGA-LPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
SGS D YIW + L L GHS V ++W P++ +A+ SDD T+RIW L+
Sbjct: 331 SGSSDCNAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIWRLQ 388
Score = 84 (34.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 21/108 (19%), Positives = 50/108 (46%)
Query: 242 NGKYLASSSNDRSAI-IWEVDLNGGVTLKHK-LSGHQKPVSCVSWSSDDQQLLTCGVEEA 299
N +++ + +N+ + +++ + L K H V ++W + +++T ++
Sbjct: 58 NFEHVLAVANEEGFVRLYDTEAQNTTKLISKEWQAHSNAVFDLAWVPGEHRIVTASGDQT 117
Query: 300 VRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIF-SGANDKSICMWE 346
+ WDV +G L + + L S + K +F +G D +I +W+
Sbjct: 118 AKVWDVRAGELLGICKGHQCSLKSVAFSRFEKAVFCTGGRDGNIMVWD 165
Score = 64 (27.6 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
Q H++ V+ L + + ++S D++A +W D+ G L GHQ + V++S
Sbjct: 91 QAHSNAVFDLAWVPGEHRIVTASGDQTAKVW--DVRAGELLGI-CKGHQCSLKSVAFSRF 147
Query: 288 DQQLLTCGVEEA-VRRWD 304
++ + G + + WD
Sbjct: 148 EKAVFCTGGRDGNIMVWD 165
Score = 52 (23.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 278 PVSC-VSWSSDDQQLLTCGVEEA-VRRWDVSSGNCLHVYEKA----GLGLVSCGWHPDRK 331
P C S + + + +L EE VR +D + N + K + W P
Sbjct: 48 PFGCSFSAAPNFEHVLAVANEEGFVRLYDTEAQNTTKLISKEWQAHSNAVFDLAWVPGEH 107
Query: 332 WIFSGANDKSICMWEL-GGKELECWKG-QRTLK 362
I + + D++ +W++ G+ L KG Q +LK
Sbjct: 108 RIVTASGDQTAKVWDVRAGELLGICKGHQCSLK 140
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 55/196 (28%), Positives = 94/196 (47%)
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLL 387
I + + DKSI +W+L ++ QR + + D+ ++SDG+ ++ + L L
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 388 DREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKL-VAKYKGHKR 444
D R++ + + S + S DN+ ++ ++ I LWN GE K +++ GHK
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKE 150
Query: 445 SRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHML 504
+R L I S S D V +W+ +C L L GHSG +N V+ +P + +
Sbjct: 151 WVSCVRFSPNTLVPT-IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSP-DGSLC 208
Query: 505 ASASDDRTIRIWGLKD 520
AS D I +W L +
Sbjct: 209 ASGGKDGVILLWDLAE 224
Score = 161 (61.7 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 58/238 (24%), Positives = 109/238 (45%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
+S RD S+ D+ + + GH+ V + S +G++ S S D +W
Sbjct: 33 TSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW-- 90
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-- 318
DL G + + + GH K V V++S+D++Q+++ + ++ W+ + G C + +A
Sbjct: 91 DLATGESTR-RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEADGH 148
Query: 319 LGLVSC-GWHPDR--KWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQI 375
VSC + P+ I S + DK++ +W L +L + ++ + V+ DG
Sbjct: 149 KEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLC 208
Query: 376 ITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE 432
+ K+ +LL D E K +E I S S N++ L I +W++E +
Sbjct: 209 ASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFS-PNRYWLCAATENSIRIWDLESK 265
Score = 128 (50.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 230 HTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVSCVSWS 285
HTD V + N + +SS D+S I+W++ D + GV + +++GH V V S
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVA-QRRMTGHSHFVQDVVLS 72
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
SD Q L+ + +R WD+++G + ++S + D + I S + D++I +W
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 346 ELGGK 350
G+
Sbjct: 133 NTLGE 137
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 364 SDLEVTSDGKQIITMCKESALLLLDREAKV--ERYIEEDQTITSFSLSRDNKFLLVNLLN 421
SD+ VTS + I + K L D+ V R + LS D +F L +
Sbjct: 28 SDVIVTSSRDKSIILWK---LTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWD 84
Query: 422 QEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR-ASCD 479
E+ LW++ GE ++ GH + V+ F + I S S D + +W+ C
Sbjct: 85 GELRLWDLATGES--TRRFVGHTKD--VLSVAFS-TDNRQIVSASRDRTIKLWNTLGECK 139
Query: 480 L-IGALPGHSGAVNCVSWNPAN--PHMLASASDDRTIRIWGLKDLNVK 524
I GH V+CV ++P P + SAS D+T+++W L++ ++
Sbjct: 140 YTISEADGHKEWVSCVRFSPNTLVP-TIVSASWDKTVKVWNLQNCKLR 186
Score = 49 (22.3 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 491 VNCVSWN-PANPHMLASASDDRTIRIWGL 518
+ C S N A+ + L S D IR+WG+
Sbjct: 295 IYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 53/195 (27%), Positives = 88/195 (45%)
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLL- 386
+ S + DK++ +W L E +R+LK +SD ++SDG ++ + L L
Sbjct: 31 LLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDGAYALSASWDKTLRLW 90
Query: 387 -LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
L R++ + S S S DN+ ++ ++ I LWN G+ K KGH
Sbjct: 91 ELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEW 150
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLA 505
+R ++SG D V +W +SC L GH+G +N V+ +P + + A
Sbjct: 151 VSCVRFSPNPQNPVIVSSGW-DKLVKVWELSSCKLQTDHIGHTGYINTVTISP-DGSLCA 208
Query: 506 SASDDRTIRIWGLKD 520
S D T +W L +
Sbjct: 209 SGGKDGTTMLWDLNE 223
Score = 168 (64.2 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 65/244 (26%), Positives = 117/244 (47%)
Query: 201 SSDRDMSLYTDHQCGRDQI----PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
SS RD +L RD+ P R+L+ GH+ V S +G Y S+S D++
Sbjct: 33 SSSRDKTLII-WNLTRDETSYGYPKRSLK---GHSHIVSDCVISSDGAYALSASWDKTLR 88
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLH-VYE 315
+WE L G T + + GH V VS+S+D++Q+++ + +++ W+ + G+C + + E
Sbjct: 89 LWE--LATGTTTR-RFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN-TLGDCKYTITE 144
Query: 316 KAGLGLVSC---GWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDG 372
K VSC +P I S DK + +WEL +L+ T I+ + ++ DG
Sbjct: 145 KGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDG 204
Query: 373 KQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG 431
+ K+ +L D E+K + + I + S N++ L I ++++E
Sbjct: 205 SLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALVFS-PNRYWLCAATASSIIIFDLEK 263
Query: 432 EVKL 435
+ K+
Sbjct: 264 KSKV 267
Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 54/223 (24%), Positives = 99/223 (44%)
Query: 177 PERRLE---HLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDE 233
P+R L+ H+V ++ A S D+ + L+ + T + GHT++
Sbjct: 55 PKRSLKGHSHIVSDCVISSDGAYALSASWDKTLRLW-------ELATGTTTRRFVGHTND 107
Query: 234 VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQ--L 291
V + FS + + + S S DRS +W + T+ K GH + VSCV +S + Q +
Sbjct: 108 VLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEK--GHSEWVSCVRFSPNPQNPVI 165
Query: 292 LTCGVEEAVRRWDVSSGNCL--HVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGG 349
++ G ++ V+ W++SS H+ + V+ PD SG D + +W+L
Sbjct: 166 VSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTIS--PDGSLCASGGKDGTTMLWDLNE 223
Query: 350 KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK 392
+ + +I L V S + + S++++ D E K
Sbjct: 224 SK-HLYSLNANDEIHAL-VFSPNRYWLCAATASSIIIFDLEKK 264
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/128 (32%), Positives = 64/128 (50%)
Query: 227 LQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVS-C 281
L+GH V L S N L SSS D++ IIW + + + G K L GH VS C
Sbjct: 11 LEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYP-KRSLKGHSHIVSDC 69
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
V SSD L+ ++ +R W++++G + ++S + D + I SG+ D+S
Sbjct: 70 VI-SSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRS 128
Query: 342 ICMWE-LG 348
I +W LG
Sbjct: 129 IKLWNTLG 136
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 70/306 (22%), Positives = 124/306 (40%)
Query: 214 CGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
C ++P+R +L H EV ++F N LA+ DR +W V + + L
Sbjct: 319 CVAARLPTRAQDVLDAHLSEVNAVRFGPNSSLLATGGADRLIHLWNV-VGSRLEANQTLE 377
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ V + Q+L +A + W V + + + R
Sbjct: 378 GAGGSITSVDFDPSGYQVLAATYNQAAQLWKVGEAQSKETLSGHKDKVTAAKFKLTRHQA 437
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAK 392
+G+ D+++ W+LG C + L + V D II+ + + D R
Sbjct: 438 VTGSRDRTVKEWDLG--RAYCSRTINVLSYCNDVVCGD-HIIISGHNDQKIRFWDSRGPH 494
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
+ I +TS SLS D LL + + + ++ ++ V + G K ++
Sbjct: 495 CTQVIPVQGRVTSLSLSHDQLHLLSCSRDNTLKVIDLRVSNIRQVFRADGFKCGSDWTKA 554
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDD 510
F ++++ +GS D +YIW + L L G H AVN V+W + HM+ S
Sbjct: 555 VFSP-DRSYALAGSCDGALYIWDVDTGKLESRLQGPHCAAVNAVAWCYSGSHMV-SVDQG 612
Query: 511 RTIRIW 516
R + +W
Sbjct: 613 RKVVLW 618
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 196 (74.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 67/306 (21%), Positives = 145/306 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
+GH V + +S +G+ LAS + ++W D + G + L+GH K ++ +SW
Sbjct: 153 KGHRHWVLSISWSPDGRKLASGCKNGQILLW--DPSTGKQVGRTLAGHSKWITGLSWEPL 210
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
+ + + + + + +VR WD ++G C + + W D ++S + D++I
Sbjct: 211 HANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGL-LYSASQDRTI 269
Query: 343 CMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+W L C RTL+ ++ + +++D + T E A ++ + ++ +
Sbjct: 270 KVWRAHDGVL-C----RTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNPQ-DLQGSL 322
Query: 398 EE--DQTITSFSLSRDN--KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+E ++ ++ ++L R + L+ + + LW+ + K + + GH+ +I
Sbjct: 323 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQA---LINQVL 379
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTI 513
+ +AS S D + +W + + +L GH AV ++W+ A+ +L S S D T+
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTL 438
Query: 514 RIWGLK 519
++W +K
Sbjct: 439 KVWDVK 444
Score = 196 (74.1 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 75/320 (23%), Positives = 142/320 (44%)
Query: 208 LYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
+Y R + +R L+GH++ V + FS GKYLAS S D + W++ T
Sbjct: 91 IYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTE---T 147
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN----CLHVYEK--AGLGL 321
GH+ V +SWS D ++L + + WD S+G L + K GL
Sbjct: 148 PHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSW 207
Query: 322 VSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
+P+ +++ S + D S+ +W+ E T ++ L DG
Sbjct: 208 EPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDR 267
Query: 382 SALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQE--IHLWNIEGEVKLVAK 438
+ + + + R ++ + + +LS D E ++ +++G ++ +
Sbjct: 268 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQ---E 324
Query: 439 YKGHKRSRF-VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL-IGALPGHSGAVNCVSW 496
K SR+ ++R G E+ + SGS+D +++W A + + GH +N V +
Sbjct: 325 LKERALSRYNLVRG--QGPER--LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLF 380
Query: 497 NPANPHMLASASDDRTIRIW 516
+P + ++ASAS D++I++W
Sbjct: 381 SP-DSRIVASASFDKSIKLW 399
Score = 190 (71.9 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 73/281 (25%), Positives = 119/281 (42%)
Query: 244 KYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW 303
+Y+ASSS D S IW D G + L+GH + V+C+ W D L + + ++ W
Sbjct: 217 RYVASSSKDGSVRIW--DTTAG-RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Query: 304 DVSSGNCLHVYEKAGLGLVSCGWHPD---RKWIFSGANDKSICMWELGGKELECWKGQRT 360
G + G + + D R F A + S+ +L G L+ K +R
Sbjct: 273 RAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPA-EASVNPQDLQGS-LQELK-ERA 329
Query: 361 LKISDLEVTSDGKQIITMCKESALLLLDREAK----VERYIEEDQTITSFSLSRDNKFLL 416
L +L V G + + + L L A+ + R I S D++ +
Sbjct: 330 LSRYNL-VRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVA 388
Query: 417 VNLLNQEIHLWNIEGEV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
++ I LW +G K +A +GH + + I + + SGS DS + +W
Sbjct: 389 SASFDKSIKLW--DGRTGKYLASLRGHVAAVYQIA---WSADSRLLVSGSSDSTLKVWDV 443
Query: 476 ASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ L LPGH+ V V W+P + +AS D+ +RIW
Sbjct: 444 KAQKLAMDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 148 (57.2 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 75/290 (25%), Positives = 130/290 (44%)
Query: 196 CMFHNSSDRDMSLYT-DHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRS 254
C + SS +D S+ D GR + +IL GHT V L++ +G L S+S DR+
Sbjct: 216 CRYVASSSKDGSVRIWDTTAGRCE------RILTGHTQSVTCLRWGGDG-LLYSASQDRT 268
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA---VRRWDVSSGNCL 311
+W + GV L L GH V+ ++ S+D L T E A V D+ G+
Sbjct: 269 IKVWRA--HDGV-LCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEASVNPQDLQ-GSLQ 323
Query: 312 HVYEKA--GLGLVSCGWHPDRKWIFSGANDKSICMWELGG--KELECWKGQRTLKISDLE 367
+ E+A LV G P+R + SG++D ++ +W K L G + L I+ +
Sbjct: 324 ELKERALSRYNLVR-GQGPER--LVSGSDDFTLFLWSPAEDKKPLTRMTGHQAL-INQVL 379
Query: 368 VTSDGKQIITMCKESALLLLD-REAKVERYIEED-QTITSFSLSRDNKFLLVNLLNQEIH 425
+ D + + + + ++ L D R K + + + S D++ L+ + +
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 426 LWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
+W+++ + KL GH + + G +ASG +D + IW R
Sbjct: 440 VWDVKAQ-KLAMDLPGHADEVYAVDWSPDGQR---VASGGKDKCLRIWRR 485
Score = 132 (51.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/139 (29%), Positives = 63/139 (45%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR--SRFVIRSCFGGLEQAF 460
+ S S S D + L N +I LW+ ++ GH + + E +
Sbjct: 159 VLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRY 218
Query: 461 IASGSEDSQVYIWHRAS--CDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
+AS S+D V IW + C+ I L GH+ +V C+ W +L SAS DRTI++W
Sbjct: 219 VASSSKDGSVRIWDTTAGRCERI--LTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRA 274
Query: 519 KDLNVKRKDCHSNGVHYCN 537
D V + +G H+ N
Sbjct: 275 HD-GVLCRTLQGHG-HWVN 291
>FB|FBgn0028496 [details] [associations]
symbol:CG30116 species:7227 "Drosophila melanogaster"
[GO:0016505 "apoptotic protease activator activity" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
UCSC:CG30116-RC FlyBase:FBgn0028496 EMBL:BT015296
ProteinModelPortal:Q6AWF2 PRIDE:Q6AWF2 InParanoid:Q6AWF2
ArrayExpress:Q6AWF2 Bgee:Q6AWF2 Uniprot:Q6AWF2
Length = 1923
Score = 204 (76.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 77/316 (24%), Positives = 136/316 (43%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R I HT + + N + SSS D S I DL G L+H+++ H+ PVS
Sbjct: 975 RRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAI--TDLASG-KLRHRITHHRGPVSG 1031
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGL-VSCGWHPDRKWIFSGANDK 340
+ + L++ G++ + WD+ + L+ + L + W+ ++ + D
Sbjct: 1032 IVVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTSAVLRIDISWNS--VFLLALCEDN 1089
Query: 341 SICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERYIE 398
++ + L GKEL KG ++ KI + + D ++ + C ++ L+ D A K+ R +
Sbjct: 1090 ALYVRTLATGKELHTLKGHKS-KIRSISIGKDSQRCVVGCDDTRALIYDMHAGKLVRSLP 1148
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVI-------RS 451
+ + + DN LV + +I ++ E V Y H R + + RS
Sbjct: 1149 PNPGPVTAVHAMDNDDFLVTVGGNKITFYSFRNEELYVNPYSRHPRRKRSLKRHAQAQRS 1208
Query: 452 CFGGLEQAFIASGSEDSQ---------VYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
L S DSQ V++ + + L GH+ V+C+ + P N
Sbjct: 1209 PSTTLPPITCFDLSRDSQQMAIASGRHVHLMRINTPEYQCTLEGHTAGVSCLKFAP-NGE 1267
Query: 503 MLASASDDRTIRIWGL 518
LA+ S+DR + IW L
Sbjct: 1268 FLATGSEDRLVHIWNL 1283
Score = 177 (67.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 60/246 (24%), Positives = 110/246 (44%)
Query: 278 PVSCVSWSSDDQQL-LTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFS 335
P++C S D QQ+ + G + R + C AG VSC + P+ +++ +
Sbjct: 1215 PITCFDLSRDSQQMAIASGRHVHLMRINTPEYQCTLEGHTAG---VSCLKFAPNGEFLAT 1271
Query: 336 GANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL-LDREAKV 393
G+ D+ + +W L G+ +KG T + + V D ++I+ ++S LL+ + +
Sbjct: 1272 GSEDRLVHIWNLALGEICNSFKGH-TAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGNL 1330
Query: 394 ERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF 453
+ I+ S S++ + +F + + + +W++ E + KY +CF
Sbjct: 1331 LQTIQGPYK--SLSVTNNMRFAVSTNGDNTLKIWSLTQEDE---KYSVSHSDEI---TCF 1382
Query: 454 G-GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
+ I SGS D + +W L L GHS AV CV+ + N + S S D
Sbjct: 1383 EISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMN 1442
Query: 513 IRIWGL 518
+ +W L
Sbjct: 1443 LILWDL 1448
Score = 163 (62.4 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 56/250 (22%), Positives = 106/250 (42%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH VSC+ ++ + + L T + V W+++ G + ++ +V D
Sbjct: 1250 LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSL 1309
Query: 332 WIFSGANDKSICMWEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
+ S D + +W G L+ +G L VT++ + ++ ++ L +
Sbjct: 1310 RVISTDRDSMLLVWMAHSGNLLQTIQGP----YKSLSVTNNMRFAVSTNGDNTLKIWSLT 1365
Query: 391 AKVERY-IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVI 449
+ E+Y + IT F +S D+ ++ + + +W G KL GH + +
Sbjct: 1366 QEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGG-KLSQVLVGHSDAVTCV 1424
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASD 509
Q + SGS+D + +W + + + L GH G V V + A+ S SD
Sbjct: 1425 AVSVTNKTQ--VLSGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKVS-ADGSTAVSGSD 1481
Query: 510 DRTIRIWGLK 519
D+T+ +W K
Sbjct: 1482 DKTLIVWETK 1491
Score = 156 (60.0 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 62/251 (24%), Positives = 113/251 (45%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GHT V L+F+ NG++LA+ S DR IW + L G + K GH PV V
Sbjct: 1250 LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLAL-GEICNSFK--GHTAPVVKVVVLM 1306
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D ++++ + + W SGN L + L + ++ S D ++ +W
Sbjct: 1307 DSLRVISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTN---NMRFAVSTNGDNTLKIWS 1363
Query: 347 LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA-KVERY-IEEDQTIT 404
L +E E + + +I+ E+++D II+ ++ +L + K+ + + +T
Sbjct: 1364 LT-QEDEKYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVT 1422
Query: 405 SFSLSRDNKF-LLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
++S NK +L + + LW++ GE V GH ++ G +
Sbjct: 1423 CVAVSVTNKTQVLSGSKDMNLILWDLLTGEE--VHTLAGHLGPVIGVKVSADG---STAV 1477
Query: 463 SGSEDSQVYIW 473
SGS+D + +W
Sbjct: 1478 SGSDDKTLIVW 1488
Score = 122 (48.0 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 46/207 (22%), Positives = 97/207 (46%)
Query: 219 IPSRTLQ-ILQGHTDEVWFLQFS--HNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGH 275
I S +L I +GHT V L + + + L + S D + ++W V L H + H
Sbjct: 926 IMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVGLRE--RRAHIKNAH 983
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLH-VYEKAG--LGLVSCGWHPDRKW 332
P++ V+ +++ +++ + ++ D++SG H + G G+V G
Sbjct: 984 TAPITGVAAGANNTLIISSSEDASIAITDLASGKLRHRITHHRGPVSGIVVAG---ACDV 1040
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL--LDRE 390
+ SG D++IC+W+L L Q T + ++++ + ++ +C+++AL + L
Sbjct: 1041 LISGGLDRTICVWDLDNFTLLNTM-QMTSAVLRIDISWNSVFLLALCEDNALYVRTLATG 1099
Query: 391 AKVERYIEEDQTITSFSLSRDNKFLLV 417
++ I S S+ +D++ +V
Sbjct: 1100 KELHTLKGHKSKIRSISIGKDSQRCVV 1126
Score = 96 (38.9 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 28/132 (21%), Positives = 57/132 (43%)
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
++ + + +FL ++ +H+WN+ GE+ +KGH + L +
Sbjct: 1257 VSCLKFAPNGEFLATGSEDRLVHIWNLALGEI--CNSFKGHTAPVVKVVVLMDSLR---V 1311
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDL 521
S DS + +W S +L+ + G +++ + N S + D T++IW L
Sbjct: 1312 ISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTN----NMRFAVSTNGDNTLKIWSLTQE 1367
Query: 522 NVKRKDCHSNGV 533
+ K HS+ +
Sbjct: 1368 DEKYSVSHSDEI 1379
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 190 (71.9 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 68/278 (24%), Positives = 116/278 (41%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
P L GH D V +QFS +G +AS S D++ +W + G T+ H V
Sbjct: 51 PQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTV---FKAHTATV 107
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPDRKWIFSGAN 338
V +SSD Q L+T ++ ++ W V L + + V C + PD + I S ++
Sbjct: 108 RSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQH-INWVRCARFSPDGRLIASASD 166
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERY 396
DK++ +W+ +E + + +E G I + + + D ++ Y
Sbjct: 167 DKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHY 226
Query: 397 IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGG 455
+ S S +L+ + + + ++ EG +L+ GH+ + G
Sbjct: 227 QVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG--RLLYTLHGHQGPATCVAFSRTG 284
Query: 456 LEQAFIASGSEDSQVYIWHR--ASCDLIGALPGH-SGA 490
F ASG D QV +W ++ D G L H SGA
Sbjct: 285 ---DFFASGGSDEQVMVWKTNFSAADYDGVLKTHKSGA 319
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 63/309 (20%), Positives = 121/309 (39%)
Query: 210 TDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK 269
T H D PS +GH D + + FS N K LAS S D IW +
Sbjct: 2 TQHSVEED--PSLERHF-RGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQ---MRA 55
Query: 270 HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD 329
+ L GH+ V CV +S + + ++ V W S V++ + S + D
Sbjct: 56 YCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSD 115
Query: 330 RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR 389
+ + + ++DK+I +W + ++ Q + + DG+ I + + + L D+
Sbjct: 116 GQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDK 175
Query: 390 EAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
++ + + E + ++ + +W++ +L+ Y+ H +
Sbjct: 176 TSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMN-RLLQHYQVHTAA-- 232
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
+ S ++ + S DS + I L+ L GH G CV+++ AS
Sbjct: 233 -VNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGD-FFASG 290
Query: 508 SDDRTIRIW 516
D + +W
Sbjct: 291 GSDEQVMVW 299
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 53/257 (20%), Positives = 114/257 (44%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC- 324
+L+ GH+ ++ V +S + +QL + ++ ++ W + + Y G V C
Sbjct: 11 SLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQ--MRAYCLVGHKDAVMCV 68
Query: 325 GWHPDRKWIFSGANDKSICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESA 383
+ P + SG+ DK++C+W K E +K T + + +SDG+ ++T +
Sbjct: 69 QFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAH-TATVRSVHFSSDGQSLVTASDDKT 127
Query: 384 LLL--LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG 441
+ + + R+ + + + S D + + ++ + LW+ + + +
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR-ECIHSFCE 186
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H F F A+G+ D V +W L+ H+ AVN +S++P+
Sbjct: 187 H--GGFANHVEFHPSGTCIAAAGT-DKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGN 243
Query: 502 HMLASASDDRTIRIWGL 518
+++ +AS+D T++I L
Sbjct: 244 YLI-TASNDSTLKILDL 259
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/202 (20%), Positives = 90/202 (44%)
Query: 321 LVSCGWHPDRKWIFSGANDKSICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMC 379
+ S + ++K + SG+ D + +W + + C G + + ++ + G + +
Sbjct: 23 ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDA-VMCVQFSPSGHLVASGS 81
Query: 380 KESALLLLDREAKVERYIEEDQTIT--SFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
++ + L K E + + T T S S D + L+ ++ I +W + + K +
Sbjct: 82 RDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQ-KFLF 140
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
H +R + IAS S+D V +W + S + I + H G N V ++
Sbjct: 141 SLSQHINW---VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFH 197
Query: 498 PANPHMLASASDDRTIRIWGLK 519
P+ +A+A D+T+++W ++
Sbjct: 198 PSGT-CIAAAGTDKTVKVWDVR 218
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 37/184 (20%), Positives = 81/184 (44%)
Query: 355 WKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERY--IEEDQTITSFSLSRDN 412
++G R I+ ++ + + KQ+ + +S L + + ++ Y + + S
Sbjct: 16 FRGHRDA-ITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSG 74
Query: 413 KFLLVNLLNQEIHLW--NIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQV 470
+ ++ + LW +++GE + +K H + +RS + + + S+D +
Sbjct: 75 HLVASGSRDKTVCLWVPSVKGESTV---FKAHTAT---VRSVHFSSDGQSLVTASDDKTI 128
Query: 471 YIW--HRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDC 528
+W HR + +L H V C ++P + ++ASASDD+T+++W C
Sbjct: 129 KVWTVHRQK--FLFSLSQHINWVRCARFSP-DGRLIASASDDKTVKLWDKTSRECIHSFC 185
Query: 529 HSNG 532
G
Sbjct: 186 EHGG 189
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 137 (53.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 62/247 (25%), Positives = 99/247 (40%)
Query: 230 HTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCVSWSSD 287
H D WFL ++ G LAS DR IW + + + K LS GHQ+ V V+WS
Sbjct: 14 HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWIC-KSVLSEGHQRTVRKVAWSPC 72
Query: 288 DQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
L + + W + + C+ E + S W P + + + DKS+ +W
Sbjct: 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW 132
Query: 346 ELGGK-ELECWKGQRTLKISDLEV-TSDGKQIITMCKESALLLLDREAKVERYIEEDQTI 403
E+ + E EC +S L T D K ++ + L + V+ Y EE+
Sbjct: 133 EVDEEDEYEC--------VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE--- 181
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNI--EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
D+ L E +W++ + + +A + R + R G EQ
Sbjct: 182 -------DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR-IWRQYLPGNEQGVA 233
Query: 462 ASGSEDS 468
SGS+ S
Sbjct: 234 CSGSDPS 240
Score = 132 (51.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 36/138 (26%), Positives = 66/138 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH V + +S G YLAS+S D + IW+ + + + L GH+ V V+W+
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT-TLEGHENEVKSVAWAPS 116
Query: 288 DQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
L TC +++V W+V + C+ V + WHP ++ + S + D ++ +
Sbjct: 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176
Query: 345 WELGGKELECWKGQRTLK 362
+ +E + W TL+
Sbjct: 177 YR---EEEDDWVCCATLE 191
Score = 119 (46.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH +EV + ++ +G LA+ S D+S +WEVD L+ H + V V W
Sbjct: 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160
Query: 287 DDQQLLTCGVEEAVR--RWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+ L + ++ V+ R + C E + S + P + + S ++D+++ +
Sbjct: 161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220
Query: 345 WE--LGGKE 351
W L G E
Sbjct: 221 WRQYLPGNE 229
Score = 100 (40.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
HS VNCV+WNP P +LAS SDD + W
Sbjct: 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 90 (36.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 49/232 (21%), Positives = 92/232 (39%)
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLV-SCGWHPDRKWIFSGAN 338
++W+ L +CG + +R W + C V + V W P ++ S +
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTS-----DGKQIITMCKESALLL--LDREA 391
D + C+W+ + EC TL+ + EV S G + T ++ ++ + +D E
Sbjct: 82 DATTCIWKKNQDDFEC---VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 392 KVERYI---EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLV-AKYKGHKRSRF 447
+ E Q + + L + + L+ E + + A +GH+ + +
Sbjct: 139 EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVW 198
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPA 499
+ F Q +AS S+D V IW + LPG+ V C +P+
Sbjct: 199 SL--AFDPSGQR-LASCSDDRTVRIWRQY-------LPGNEQGVACSGSDPS 240
Score = 85 (35.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 43/177 (24%), Positives = 77/177 (43%)
Query: 204 RDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
RD S++ D+ + +L HT +V + + + + LAS+S D + ++ + +
Sbjct: 125 RDKSVWVWEVDEEDEY--ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEED 182
Query: 264 GGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW-DVSSGNCLHVYEKAGLGLV 322
V L GH+ V +++ Q+L +C + VR W GN E+ G+
Sbjct: 183 DWVCCA-TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGN-----EQ---GVA 233
Query: 323 SCGWHPDRKWI--FSGANDKSI--CMW-ELGGKELECWKGQRTLKISDLEVTSDGKQ 374
G P K I SG + ++I W +L G L G +++ + SD +Q
Sbjct: 234 CSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA-LATACGDDAIRVFQEDPNSDPQQ 289
Score = 38 (18.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 457 EQAFIASGSEDSQVYIW 473
E +AS S+D +V W
Sbjct: 315 EPGLLASCSDDGEVAFW 331
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 190 (71.9 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 56/196 (28%), Positives = 94/196 (47%)
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLLL 387
I + + DKSI +W+L + QR L + D+ ++SDG+ ++ + L L
Sbjct: 31 IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 90
Query: 388 DREA--KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKL-VAKYKGHKR 444
D R++ + + S + S DN+ ++ ++ I LWN GE K +++ GHK
Sbjct: 91 DLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKE 150
Query: 445 SRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHML 504
+R L I S S D V +W+ +C L +L GHSG +N V+ +P + +
Sbjct: 151 WVSCVRFSPNTLVPT-IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSP-DGSLC 208
Query: 505 ASASDDRTIRIWGLKD 520
AS D I +W L +
Sbjct: 209 ASGGKDGVILLWDLAE 224
Score = 156 (60.0 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 56/213 (26%), Positives = 101/213 (47%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GH+ V + S +G++ S S D +W DL G T + + GH K V V++S+
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLW--DLATGETTR-RFVGHTKDVLSVAFST 115
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG---LVSC-GWHPDR--KWIFSGANDK 340
D++Q+++ + ++ W+ + G C + + G G VSC + P+ I S + DK
Sbjct: 116 DNRQIVSASRDRTIKLWN-TLGECKYTISE-GDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 341 SICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEE 399
++ +W L +L + ++ + V+ DG + K+ +LL D E K +E
Sbjct: 174 TVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE 432
I S S N++ L I +W++E +
Sbjct: 234 GSIIHSLCFS-PNRYWLCAATENSIRIWDLESK 265
Score = 133 (51.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 226 ILQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVSC 281
I++ HTD V + N + ++S D+S I+W++ D + GV + +L+GH V
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVA-QRRLTGHSHFVED 68
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
V SSD Q L+ + +R WD+++G + ++S + D + I S + D++
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 342 ICMWELGGK 350
I +W G+
Sbjct: 129 IKLWNTLGE 137
Score = 123 (48.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 47/185 (25%), Positives = 80/185 (43%)
Query: 176 IPERRL---EHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTD 232
+ +RRL H VE ++ S D ++ L+ D T + GHT
Sbjct: 54 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW-------DLATGETTRRFVGHTK 106
Query: 233 EVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD--QQ 290
+V + FS + + + S+S DR+ +W T+ GH++ VSCV +S +
Sbjct: 107 DVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEG-DGHKEWVSCVRFSPNTLVPT 165
Query: 291 LLTCGVEEAVRRWDVSSGNCLHVYEKAGLG--LVSCGWHPDRKWIFSGANDKSICMWELG 348
+++ ++ V+ W++ NC G L + PD SG D I +W+L
Sbjct: 166 IVSASWDKTVKVWNLQ--NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLA 223
Query: 349 -GKEL 352
GK+L
Sbjct: 224 EGKKL 228
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 45/168 (26%), Positives = 76/168 (45%)
Query: 364 SDLEVTSDGKQIITMCKESALLLLDREAKV--ERYIEEDQTITSFSLSRDNKFLLVNLLN 421
SD+ VT+ + I + K L D+ V R + LS D +F L +
Sbjct: 28 SDIIVTASRDKSIILWK---LTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 84
Query: 422 QEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR-ASCD 479
E+ LW++ GE ++ GH + V+ F + I S S D + +W+ C
Sbjct: 85 GELRLWDLATGET--TRRFVGHTKD--VLSVAFS-TDNRQIVSASRDRTIKLWNTLGECK 139
Query: 480 L-IGALPGHSGAVNCVSWNPAN--PHMLASASDDRTIRIWGLKDLNVK 524
I GH V+CV ++P P + SAS D+T+++W L++ ++
Sbjct: 140 YTISEGDGHKEWVSCVRFSPNTLVP-TIVSASWDKTVKVWNLQNCKLR 186
Score = 47 (21.6 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAV-NCVSWN-PANPHMLASASDDRTIRIWGL 518
ED +V + A + G G+ V C S N A+ L S D +R+WG+
Sbjct: 269 EDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGI 323
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 142 (55.0 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 49/182 (26%), Positives = 74/182 (40%)
Query: 224 LQILQGHTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCV 282
L + H D WFL ++ +G LAS DR+ IW D + V GHQ+ V V
Sbjct: 8 LSRVSAHPDSRCWFLAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKV 67
Query: 283 SWSSDDQQLLTCGVEEAVRRW--DVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
SWS L + + W C+ E + S W P + + + DK
Sbjct: 68 SWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDK 127
Query: 341 SICMWELGGKE-LECWKGQRTLKISDLEV-TSDGKQIITMCKESALLLLDREAKVERYIE 398
S+ +WE+ +E EC +S L T D K ++ + L + V+ Y E
Sbjct: 128 SVWVWEVDEEEEYEC--------VSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYRE 179
Query: 399 ED 400
E+
Sbjct: 180 EE 181
Score = 121 (47.7 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 41/178 (23%), Positives = 77/178 (43%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH +EV + ++ +G LA+ S D+S +WEVD L+ H + V V W
Sbjct: 101 LEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHP 160
Query: 287 DDQQLLTCGVEEAVR--RWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+ + L + +++V+ R + C E + S + + + + ++DK++ +
Sbjct: 161 NQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRI 220
Query: 345 W------ELGGKELECWK------GQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
W E G K WK G T + D+ I T C + A+ + + +
Sbjct: 221 WRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIFEED 278
Score = 94 (38.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 480 LIGALP-GHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L +P H+ VNCV+W+P P++LAS SDD + W
Sbjct: 290 LTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFW 327
Score = 43 (20.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 473 WHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
W + C L G H+ V V+WN +A+A D +RI+
Sbjct: 237 W-KCVCTLTGY---HTRTVYDVNWNHLTG-AIATACGDDAVRIF 275
>TAIR|locus:2153443 [details] [associations]
symbol:AT5G54200 "AT5G54200" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB013387 HOGENOM:HOG000239143 IPI:IPI00537060
RefSeq:NP_200231.1 UniGene:At.27971 ProteinModelPortal:Q9FK21
SMR:Q9FK21 PRIDE:Q9FK21 EnsemblPlants:AT5G54200.1 GeneID:835508
KEGG:ath:AT5G54200 TAIR:At5g54200 InParanoid:Q9FK21 OMA:KERRSTD
PhylomeDB:Q9FK21 ProtClustDB:CLSN2916439 Genevestigator:Q9FK21
Uniprot:Q9FK21
Length = 825
Score = 164 (62.8 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 57/215 (26%), Positives = 103/215 (47%)
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHP-DRK 331
GH V +SWS Q LL+ +++ VR WD+SS CL V+ + V+C ++P D
Sbjct: 466 GHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCLKVFSHSDY--VTCIQFNPVDDN 522
Query: 332 WIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGK-QIITMCKESALLLLDRE 390
+ SG+ D + +W + ++ W + ++ T DG+ ++ K + L +
Sbjct: 523 YFISGSLDAKVRIWSIPDHQVVDWNDLHEM-VTAACYTPDGQGALVGSYKGTCCLYNTHD 581
Query: 391 AKVERYIE------EDQT----ITSFS-LSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY 439
K+++ E + +T IT F ++ + +LV + + ++G V LV K+
Sbjct: 582 NKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRV--VDG-VDLVHKF 638
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWH 474
KG + + I + F+ S SEDS VY+W+
Sbjct: 639 KGFRNTNSQISASLTS-NGKFLVSASEDSNVYVWN 672
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 45/217 (20%), Positives = 99/217 (45%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS-D 287
GH D+V L +S + ++L SSS D++ +W DL+ LK + H V+C+ ++ D
Sbjct: 466 GHLDDVLDLSWSKS-QHLLSSSMDKTVRLW--DLSSKTCLK--VFSHSDYVTCIQFNPVD 520
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
D ++ ++ VR W + + + + +C + PD + G+ + C++
Sbjct: 521 DNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAAC-YTPDGQGALVGSYKGTCCLYNT 579
Query: 348 GGKELECWKG-------QRT--LKISDLE-VTSDGKQIITMCKESALLLLDREAKVERY- 396
+L+ + ++T KI+ + V +++ +S ++D V ++
Sbjct: 580 HDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKFK 639
Query: 397 -IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGE 432
+ S SL+ + KFL+ + +++WN + +
Sbjct: 640 GFRNTNSQISASLTSNGKFLVSASEDSNVYVWNYDSD 676
Score = 92 (37.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S D V +W +S + HS V C+ +NP + + S S D +RIW + D
Sbjct: 482 LLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPD 540
Query: 521 LNV 523
V
Sbjct: 541 HQV 543
Score = 83 (34.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
Q +Q H +W ++FS +G+YLAS+ D IW+V
Sbjct: 357 QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
>ZFIN|ZDB-GENE-040426-2571 [details] [associations]
symbol:fbxw5 "F-box and WD-40 domain protein 5"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0051298 "centrosome duplication" evidence=ISS] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-040426-2571 GO:GO:0005737 GO:GO:0051298
Gene3D:2.130.10.10 SUPFAM:SSF50978 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0019005 GO:GO:0031146 GO:GO:0080008 CTD:54461 eggNOG:NOG81436
HOVERGEN:HBG051595 KO:K10263 OMA:LWLNNAF OrthoDB:EOG4B8JCP
GeneTree:ENSGT00530000063585 HOGENOM:HOG000231549 EMBL:CU468929
EMBL:BX294186 EMBL:BC057409 IPI:IPI00513412 RefSeq:NP_998484.1
UniGene:Dr.78606 Ensembl:ENSDART00000027353
Ensembl:ENSDART00000131298 GeneID:406611 KEGG:dre:406611
InParanoid:Q6PFV0 NextBio:20818158 Uniprot:Q6PFV0
Length = 597
Score = 130 (50.8 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 453 FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
F + + F+ASG+ED YIW R + L H VN V+++PA+ +L SASDD T
Sbjct: 498 FLDVSRDFVASGAEDKHGYIWDRHYNICLARLQ-HDDVVNSVAFSPADQELLLSASDDST 556
Query: 513 IRIW 516
I++W
Sbjct: 557 IKVW 560
Score = 108 (43.1 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 206 MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGG 265
+S Y + + D IP +Q L+ H D+V L FSH G +S S D + +W+ + + G
Sbjct: 65 VSWYREFKRLYDCIPCVEVQTLKEHHDQVLHLAFSHRGHRFSSCSKDCTVKLWDTEQSDG 124
Query: 266 -VTLKHKLSGHQKPVSCVSWS---SDDQQLLTCGV 296
++L H S Q +S +DD LL GV
Sbjct: 125 TISLVHSCSMRQYNWGYTQFSQFNADDTLLLVSGV 159
Score = 47 (21.6 bits), Expect = 4.1e-12, Sum P(3) = 4.1e-12
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 358 QRTLKISDLEVTSDGKQIITMCK--ESALLLLDREAKVER 395
+R KI ++ ++ ++ C+ +S LLLD EA+ +R
Sbjct: 237 KRLFKIQNINASTIRTVMVAHCRRHDSPDLLLDYEAQAQR 276
Score = 37 (18.1 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN 309
L H V +++S + +C + V+ WD +
Sbjct: 86 LKEHHDQVLHLAFSHRGHRFSSCSKDCTVKLWDTEQSD 123
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 191 (72.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 68/297 (22%), Positives = 129/297 (43%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
IL GH + + ++F + + S+S D + +W D G + L GH V + +
Sbjct: 101 ILTGHRNCINSVKFHPSFSLMVSASEDATIKVW--DFESG-EFERTLKGHTNAVQDIDFD 157
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICM 344
L +C + ++ WD + +C+ VSC + P + S + DK+I +
Sbjct: 158 KTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHN-VSCVRFTPSGDQLISSSRDKTIKV 216
Query: 345 WELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTI 403
WE G ++ G + + V+ DG I C D+ K ++ + +
Sbjct: 217 WEAATGYCIKTLVGHEDW-VRKITVSEDGS-CIASCSN------DQTIKTWNIVK-GECL 267
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGL--EQAFI 461
++ R++ ++ L ++ +I G L++ +G + V + G L + ++
Sbjct: 268 ATY---REHSHVVECLAFSTANIIDIPGS--LLSTPEGKSK---VKQGPGGNLVGQCGYL 319
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL 518
A+GS D + IW A+ + GH V V ++P +L S DD+TIR+W +
Sbjct: 320 ATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLL-SVGDDKTIRVWDI 375
Score = 173 (66.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 68/295 (23%), Positives = 128/295 (43%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GHT+ V + F G LAS S D + +W+ V H GH VSCV ++
Sbjct: 144 LKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLH---GHDHNVSCVRFTP 200
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
QL++ ++ ++ W+ ++G C+ + D I S +ND++I W
Sbjct: 201 SGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260
Query: 347 L-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
+ G+ L ++ + + + L ++ II + S L + ++KV++
Sbjct: 261 IVKGECLATYR-EHSHVVECLAFST--ANIIDI-PGSLLSTPEGKSKVKQG-------PG 309
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+L +L ++ I +W + + +A Y GH +R G F+ S
Sbjct: 310 GNLVGQCGYLATGSRDKTIKIWEL-ATGRCLATYIGHDNWVRAVRFHPCG---KFLLSVG 365
Query: 466 EDSQVYIWHRASCDLIGAL-PGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
+D + +W A I + H+ ++C+ + NPH+ DD I++W L+
Sbjct: 366 DDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDD-VIKVWKLQ 419
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 59/255 (23%), Positives = 110/255 (43%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
++ L GH V ++F+ +G L SSS D++ +WE G +K L GH+ V ++
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT--GYCIK-TLVGHEDWVRKIT 239
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
S D + +C ++ ++ W++ G CL Y + +V C FS AN
Sbjct: 240 VSEDGSCIASCSNDQTIKTWNIVKGECLATYREHS-HVVEC-------LAFSTAN----- 286
Query: 344 MWELGGKELECWKGQRTLKISDL-EVTSDGKQIITMCKESALLLLDREAK--VERYIEED 400
+ ++ G L +G+ +K + + T ++ + + + + YI D
Sbjct: 287 IIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHD 346
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGE-VKLVAKYKGHKRSRFVIRSCFGGLEQ 458
+ + KFLL ++ I +W+I +G +K + + H S + C L
Sbjct: 347 NWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFIS--CLDFC---LHN 401
Query: 459 AFIASGSEDSQVYIW 473
IA+G D + +W
Sbjct: 402 PHIATGGVDDVIKVW 416
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 84/316 (26%), Positives = 133/316 (42%)
Query: 223 TLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
T IL GH + +++S G+YLAS+S D + IW +G L GH+ V
Sbjct: 50 TKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS-SGEFECNATLEGHENEVKS 108
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
VSWS L TC +++V W+V+ + C V + WHP + + S +
Sbjct: 109 VSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASY 168
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE-SALLLLDREAKVERYI 397
D +I M+ +L+ SD + T+ T+ S + +D +A+ +R +
Sbjct: 169 DNTIKMF--AESQLD----------SDWDCTA------TLSSHTSTVWSIDFDAEGDRLV 210
Query: 398 E--EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG-HKRSRFVIRSC-F 453
+D+T+ + + +++ +W K V G H R+ + + C
Sbjct: 211 SCSDDKTLKIWRAYHPGNDAGIATPDKQ-SVW------KCVCTLSGQHSRAIYDVSWCKL 263
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCD---------LIGALPGHSGAVNCVSWNPANPHML 504
GL IA+G D + I+ S L H VN V WNPA L
Sbjct: 264 TGL----IATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQL 319
Query: 505 ASASDDRTIRIWGLKD 520
S SDD TI+IW + D
Sbjct: 320 ISCSDDGTIKIWKVAD 335
Score = 144 (55.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 35/131 (26%), Positives = 55/131 (41%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
LQGH +W + + G AS D++ +W + N T GH++ + + WS
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
Q L + + W SSG C E + S W + + + DKS+ +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWI 129
Query: 345 WELGGK-ELEC 354
WE+ G E EC
Sbjct: 130 WEVAGDDEFEC 140
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 84/316 (26%), Positives = 133/316 (42%)
Query: 223 TLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
T IL GH + +++S G+YLAS+S D + IW +G L GH+ V
Sbjct: 50 TKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS-SGEFECNATLEGHENEVKS 108
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
VSWS L TC +++V W+V+ + C V + WHP + + S +
Sbjct: 109 VSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASY 168
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE-SALLLLDREAKVERYI 397
D +I M+ +L+ SD + T+ T+ S + +D +A+ +R +
Sbjct: 169 DNTIKMF--AESQLD----------SDWDCTA------TLSSHTSTVWSIDFDAEGDRLV 210
Query: 398 E--EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG-HKRSRFVIRSC-F 453
+D+T+ + + +++ +W K V G H R+ + + C
Sbjct: 211 SCSDDKTLKIWRAYHPGNDAGIATPDKQ-SVW------KCVCTLSGQHSRAIYDVSWCKL 263
Query: 454 GGLEQAFIASGSEDSQVYIWHRASCD---------LIGALPGHSGAVNCVSWNPANPHML 504
GL IA+G D + I+ S L H VN V WNPA L
Sbjct: 264 TGL----IATGCGDDGIRIFKETSDSKRDEPTFEQLTAEETAHEQDVNAVEWNPAVAGQL 319
Query: 505 ASASDDRTIRIWGLKD 520
S SDD TI+IW + D
Sbjct: 320 ISCSDDGTIKIWKVDD 335
Score = 144 (55.7 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 35/131 (26%), Positives = 55/131 (41%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
LQGH +W + + G AS D++ +W + N T GH++ + + WS
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSP 69
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
Q L + + W SSG C E + S W + + + DKS+ +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWI 129
Query: 345 WELGGK-ELEC 354
WE+ G E EC
Sbjct: 130 WEVAGDDEFEC 140
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 143 (55.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 62/252 (24%), Positives = 99/252 (39%)
Query: 224 LQILQGHTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCV 282
L + H D WFL ++ G LAS DRS IW + + + GHQ+ V V
Sbjct: 8 LSRILAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKV 67
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+WS L + + W + + C+ E + S W P + + + DK
Sbjct: 68 AWSPCGNYLASASFDATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127
Query: 341 SICMWELGGK-ELECWKGQRTLKISDLEV-TSDGKQIITMCKESALLLLDREAKVERYIE 398
S+ +WE+ + E EC +S L T D K ++ + L + V+ Y E
Sbjct: 128 SVWVWEVDEEDEYEC--------VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYRE 179
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI--EGEVKLVAKYKGHKRSRFVIRSCFGGL 456
E+ D+ L E +W++ + + +A + R + R G
Sbjct: 180 EE----------DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR-IWRQYLPGN 228
Query: 457 EQAFIASGSEDS 468
EQ SGSE S
Sbjct: 229 EQGVACSGSEAS 240
Score = 115 (45.5 bits), Expect = 0.00093, P = 0.00093
Identities = 46/204 (22%), Positives = 87/204 (42%)
Query: 326 WHPDRKWIFSGANDKSICMWELGG-----KELECWKGQRTLKISDLEVTSDGKQIITMCK 380
W+P + S D+S+ +W G K + C QRT++ + + G + +
Sbjct: 24 WNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVR--KVAWSPCGNYLASASF 81
Query: 381 ESALLLLDR-EAKVE--RYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI--EGEVK 434
++ + + E E +E + + S + + L ++ + +W + E E +
Sbjct: 82 DATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 435 LVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLI--GALPGHSGAVN 492
V+ H + ++ Q +AS S D V ++ D + L GH V
Sbjct: 142 CVSVLNSHTQD---VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVW 198
Query: 493 CVSWNPANPHMLASASDDRTIRIW 516
++++P+ LAS SDDRT+RIW
Sbjct: 199 SLAFDPSGQR-LASCSDDRTVRIW 221
Score = 90 (36.7 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
HS VNCV+WNP +LAS SDD + W
Sbjct: 302 HSQDVNCVAWNPKERGLLASCSDDGELAFW 331
Score = 84 (34.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 50/226 (22%), Positives = 91/226 (40%)
Query: 282 VSWSSDDQQLLTCGVEEAVRRW--DVSSGNCLHVYEKAGLGLV-SCGWHPDRKWIFSGAN 338
++W+ L +CG + +VR W + S C V + V W P ++ S +
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTS-----DGKQIITMCKESALLL--LDREA 391
D + C+W+ + EC TL+ + EV S G + T ++ ++ + +D E
Sbjct: 82 DATTCIWKKNEDDFEC---VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 392 KVERYI---EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLV-AKYKGHKRSRF 447
+ E Q + + L + + L+ E + + A +GH+ + +
Sbjct: 139 EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVW 198
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNC 493
+ F Q +AS S+D V IW + LPG+ V C
Sbjct: 199 SL--AFDPSGQR-LASCSDDRTVRIWRQY-------LPGNEQGVAC 234
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 457 EQAFIASGSEDSQVYIW 473
E+ +AS S+D ++ W
Sbjct: 315 ERGLLASCSDDGELAFW 331
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 195 (73.7 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 76/325 (23%), Positives = 131/325 (40%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV-DLNGGVTLKHKLSGH------Q 276
L +L H V L FS +G + SS D+ +IW++ L T+ S +
Sbjct: 188 LAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPE 247
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA-GLG--LVSCGWHPDRKWI 333
+P + S LT G + A+R W+ +SG C+H ++ G G L C +
Sbjct: 248 EPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLL 307
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS-DGKQIITMCKESALLLLDREAK 392
S D ++ +++ L + ++ D+ + ++ L + D +
Sbjct: 308 LSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTS 367
Query: 393 VERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLW--NIEGEVKLVAKYKGHKRSRFVI 449
+ + + + + R + +Q I +W N GEV VA+ GH S I
Sbjct: 368 ACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTI 427
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA----------------VNC 493
C L++ F+ +GS+D V +W L+ GH G +N
Sbjct: 428 --CCSRLKETFLVTGSQDCTVKLWPLPEA-LLSKGTGHEGGPVFLQAQATQHCHDKDINS 484
Query: 494 VSWNPANPHMLASASDDRTIRIWGL 518
V+ P N +LA+ S DRT ++W L
Sbjct: 485 VAVAP-NDKLLATGSQDRTAKLWAL 508
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 52/226 (23%), Positives = 100/226 (44%)
Query: 206 MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGG 265
+S T H+ G + ++ Q H ++ + + N K LA+ S DR+A +W +
Sbjct: 456 LSKGTGHEGGPVFLQAQATQ--HCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPR--- 510
Query: 266 VTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG 325
L SGH++ + CV +S DQ L T + ++ W + +CL +E ++
Sbjct: 511 CQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVA 570
Query: 326 WHPDRKWIFSGANDKSICMWELGGKELECWKGQRTL-----KISDLEVTSDGKQIITMCK 380
+ + S +D + +W + K EC RTL K+ L + + +T
Sbjct: 571 FVSRGTQLLSSGSDGLLKLWTI--KNNEC---VRTLDAHEDKVWGLHCSRLDDRALTGAS 625
Query: 381 ESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHL 426
+S ++L + E+ E+Q + + + L NLL+++ +L
Sbjct: 626 DSRVVLWKDVTEAEQ--AEEQAKREEQVVKQQE--LDNLLHEKRYL 667
Score = 128 (50.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 431 GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA 490
G V L A+ H + I S +A+GS+D +W C L+G GH
Sbjct: 465 GPVFLQAQATQHCHDKD-INSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSGHRRG 523
Query: 491 VNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGV 533
+ CV ++P + +LA+AS D TI++W L+D + +K + H V
Sbjct: 524 LWCVQFSPMD-QVLATASADGTIKLWALQDFSCLKTFEGHDASV 566
Score = 122 (48.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 33/142 (23%), Positives = 70/142 (49%)
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
D+ I S +++ ++K L ++ LW + +L+ + GH+R + ++ F ++Q
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAKLWALP-RCQLLGTFSGHRRGLWCVQ--FSPMDQV 535
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
+A+ S D + +W + GH +V V++ +L+S SD +++W +K
Sbjct: 536 -LATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDG-LLKLWTIK 593
Query: 520 DLN-VKRKDCHSN---GVHYCN 537
+ V+ D H + G+H C+
Sbjct: 594 NNECVRTLDAHEDKVWGLH-CS 614
Score = 65 (27.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 21/112 (18%), Positives = 47/112 (41%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
+Q G++L R I+ D+ G L+ Q+ ++ S DD+ L+T
Sbjct: 30 VQLDQTGQHLFCVCGTRVNIL---DVASGAVLRSLEQEDQEDITAFDLSPDDKVLVTASR 86
Query: 297 EEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL 347
+ +W G+ +++ V+ + P + +G D ++ +W++
Sbjct: 87 ALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDV 138
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 195 (73.7 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 76/325 (23%), Positives = 131/325 (40%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV-DLNGGVTLKHKLSGH------Q 276
L +L H V L FS +G + SS D+ +IW++ L T+ S +
Sbjct: 188 LAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPE 247
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA-GLG--LVSCGWHPDRKWI 333
+P + S LT G + A+R W+ +SG C+H ++ G G L C +
Sbjct: 248 EPAPELGVKSAGLHFLTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLL 307
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS-DGKQIITMCKESALLLLDREAK 392
S D ++ +++ L + ++ D+ + ++ L + D +
Sbjct: 308 LSVTADHNLLLYDAHSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTS 367
Query: 393 VERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLW--NIEGEVKLVAKYKGHKRSRFVI 449
+ + + + + R + +Q I +W N GEV VA+ GH S I
Sbjct: 368 ACQILHGHTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTI 427
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGA----------------VNC 493
C L++ F+ +GS+D V +W L+ GH G +N
Sbjct: 428 --CCSRLKETFLVTGSQDCTVKLWPLPEA-LLSKGTGHEGGPVFLQAQATQRCHDKDINS 484
Query: 494 VSWNPANPHMLASASDDRTIRIWGL 518
V+ P N +LA+ S DRT ++W L
Sbjct: 485 VAVAP-NDKLLATGSQDRTAKLWAL 508
Score = 131 (51.2 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 52/226 (23%), Positives = 101/226 (44%)
Query: 206 MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGG 265
+S T H+ G + ++ Q + H ++ + + N K LA+ S DR+A +W +
Sbjct: 456 LSKGTGHEGGPVFLQAQATQ--RCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPR--- 510
Query: 266 VTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG 325
L SGH++ + CV +S DQ L T + ++ W + +CL +E ++
Sbjct: 511 CQLLGTFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVA 570
Query: 326 WHPDRKWIFSGANDKSICMWELGGKELECWKGQRTL-----KISDLEVTSDGKQIITMCK 380
+ + S +D + +W + K EC RTL K+ L + + +T
Sbjct: 571 FVSRGTQLLSSGSDGLLKLWTI--KNNEC---VRTLDAHEDKVWGLHCSRLDDRALTGAS 625
Query: 381 ESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHL 426
+S ++L + E+ E+Q + + + L NLL+++ +L
Sbjct: 626 DSRVVLWKDVTEAEQ--AEEQAKREEQVVKQQE--LDNLLHEKRYL 667
Score = 127 (49.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+A+GS+D +W C L+G GH + CV ++P + +LA+AS D TI++W L+D
Sbjct: 494 LATGSQDRTAKLWALPRCQLLGTFSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQD 552
Query: 521 LN-VKRKDCHSNGV 533
+ +K + H V
Sbjct: 553 FSCLKTFEGHDASV 566
Score = 65 (27.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 21/112 (18%), Positives = 47/112 (41%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
+Q G++L R I+ D+ G L+ Q+ ++ S DD+ L+T
Sbjct: 30 VQLDQTGQHLFCVCGTRVNIL---DVASGAVLRSLEQEDQEDITAFDLSPDDKVLVTASR 86
Query: 297 EEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSICMWEL 347
+ +W G+ +++ V+ + P + +G D ++ +W++
Sbjct: 87 ALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATGGCDGAVRVWDV 138
>TAIR|locus:2040731 [details] [associations]
symbol:AT2G37670 "AT2G37670" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AC004684 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 IPI:IPI00535445 PIR:T02533 RefSeq:NP_181303.1
UniGene:At.50121 ProteinModelPortal:O80935 SMR:O80935
EnsemblPlants:AT2G37670.1 GeneID:818344 KEGG:ath:AT2G37670
TAIR:At2g37670 HOGENOM:HOG000239143 InParanoid:O80935 OMA:GWIKVRQ
PhylomeDB:O80935 ProtClustDB:CLSN2683085 ArrayExpress:O80935
Genevestigator:O80935 Uniprot:O80935
Length = 903
Score = 160 (61.4 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 55/216 (25%), Positives = 102/216 (47%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHP-D 329
L GH + +SWS Q LL+ +++ VR WD+ + CL ++ A V+C + P D
Sbjct: 502 LKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIETKTCLKLF--AHNDYVTCIQFSPVD 558
Query: 330 RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIIT-----MCK---- 380
+ SG+ D I +W + + + W + ++ T DG+ + +C+
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEM-VTAACYTPDGQGALIGSHKGICRAYDT 617
Query: 381 ESALLLLDREAKVE--RYIEEDQTITSFSLSRDNKF-LLVNLLNQEIHLWNIEGEVKLVA 437
E L + V+ + + + ITSF S N +LV + I + ++G +++
Sbjct: 618 EDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRI--LDGS-EVIH 674
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
K+KG + + + + + + +I SEDSQVY+W
Sbjct: 675 KFKGFRNTCSQLSASYSQ-DGKYIICASEDSQVYLW 709
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 45/215 (20%), Positives = 101/215 (46%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH D + L +S + + L SSS D++ +W+++ + KL H V+C+ +S
Sbjct: 502 LKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIETKTCL----KLFAHNDYVTCIQFSP 556
Query: 287 -DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM- 344
D+ L+ ++ +R W + + + + + +C + PD + G++ K IC
Sbjct: 557 VDENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAAC-YTPDGQGALIGSH-KGICRA 614
Query: 345 -----WELGG-KELECW---KGQRTLKISDLEVTS-DGKQIITMCKESALLLLDREAKVE 394
+L +++ K Q KI+ + + + +++ +S + +LD +
Sbjct: 615 YDTEDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRILDGSEVIH 674
Query: 395 RYIEEDQTIT--SFSLSRDNKFLLVNLLNQEIHLW 427
++ T + S S S+D K+++ + +++LW
Sbjct: 675 KFKGFRNTCSQLSASYSQDGKYIICASEDSQVYLW 709
Score = 86 (35.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S D V +W + + L H+ V C+ ++P + + S S D IRIW ++D
Sbjct: 520 LLSSSMDKTVRLWDIETKTCL-KLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQD 578
Query: 521 LNVKR-KDCH 529
+V D H
Sbjct: 579 RHVVEWSDLH 588
Score = 85 (35.0 bits), Expect = 6.3e-12, Sum P(2) = 6.3e-12
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
Q +Q H VW ++FS + YLAS DR +WEV
Sbjct: 398 QEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEV 433
>UNIPROTKB|F1RFA8 [details] [associations]
symbol:MLST8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731
GO:GO:0030838 GO:GO:0032314 GO:GO:0032008
GeneTree:ENSGT00390000014795 OMA:NNKGNCY EMBL:FP102909
EMBL:FP102350 Ensembl:ENSSSCT00000008815 Uniprot:F1RFA8
Length = 330
Score = 187 (70.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 69/303 (22%), Positives = 139/303 (45%)
Query: 246 LASSSNDRSAIIWEVDLNGGV---TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRR 302
LA++ D + W+ + G+ T++H+ S Q V+ + + D + G + +R
Sbjct: 17 LATAGYDHTVRFWQA--HSGICTRTVQHQDSAQQ--VNALEITPDRSMIAAAGYQH-IRM 71
Query: 303 WDVSSGNCLHV--YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK-GQR 359
+D++S N + Y+ + S G+H D +W+++G D + +W+L + L+C + Q
Sbjct: 72 YDLNSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQV 131
Query: 360 TLKISDLEVTSDGKQIITMCKESALLLLDREAKV-ERYIEEDQ-TITSFSLSRDNKFLLV 417
I+ + + + ++I + A+ + D + E+ I E + +ITS + D ++
Sbjct: 132 NAPINCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPEVSITSAHIDPDASYMAA 191
Query: 418 NLLNQEIHLWNIEG----EV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
+WN+ G EV +L+ K K +R+ ++ F + +A+ S D I
Sbjct: 192 VNSTGNCFVWNLTGGIGDEVTQLIPKTKIPAHTRYALQCRFSP-DSTLLATCSADQTCKI 250
Query: 473 WHRASCDLIGAL------PGHSGAVNCVSWNPA---NPHMLASASDDRTIRIWGLKDLNV 523
W ++ L+ L PG S W A + + +AS D R+W ++ +
Sbjct: 251 WRTSNFSLMTELSIKSSNPGESS--RGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEI 308
Query: 524 KRK 526
KR+
Sbjct: 309 KRE 311
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 193 (73.0 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 70/307 (22%), Positives = 134/307 (43%)
Query: 215 GRD-QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
G++ ++P+ L + H EV +QFS + LA+ DR +WEV K LS
Sbjct: 305 GKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEV-FGEKCEFKGSLS 363
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ + + S LL + A R W V H ++S + D I
Sbjct: 364 GSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI 423
Query: 334 FSGANDKSICMWELGGKELECWKGQRT-LKISDLEVTSDGKQIITMCKESALLLLD-REA 391
SG++D+++ +W+L K C K +D+ T + +++ + + D R
Sbjct: 424 VSGSHDRTLKLWDLRSKV--CIKTVFAGSSCNDIVCTE--QCVMSGHFDKKIRFWDIRSE 479
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIR 450
+ R +E IT+ L+ + LL + + + ++ +K G K R
Sbjct: 480 SIVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTR 539
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASD 509
F + +++A+GS + +YIW + + L HS ++N V+W+P+ H+++
Sbjct: 540 VVFSP-DGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKG 598
Query: 510 DRTIRIW 516
+ + +W
Sbjct: 599 CKAV-LW 604
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 156 (60.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/198 (24%), Positives = 92/198 (46%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH ++ + S N K +A+ S DR A +W +L +GH++ + CV +S
Sbjct: 487 RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCP---DCSLLGVFTGHKRGIWCVQFSPV 543
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE- 346
DQ L T + ++ W + +CL +E ++ + + SG +D + +W
Sbjct: 544 DQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTI 603
Query: 347 --------LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKE-SALLLLDREAKVERYI 397
L G E + W G T K D+ VT+ IT+ K+ + + + +AK E I
Sbjct: 604 KTNECVKTLDGHEDKIW-GLHTNKQDDMVVTASSDSSITLWKDVTEIEQEEAQAKREEQI 662
Query: 398 EEDQTITSFSLSRDNKFL 415
++Q +++ L + ++L
Sbjct: 663 MKEQELSN--LLHEKRYL 678
Score = 136 (52.9 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPA 499
+GH + I S IA+GS+D +W C L+G GH + CV ++P
Sbjct: 487 RGHDKD---INSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPV 543
Query: 500 NPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGV 533
+ +LA++S D T+++WGL+D + +K + H V
Sbjct: 544 D-QILATSSADGTLKLWGLQDFSCLKTFEGHDASV 577
Score = 113 (44.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 57/263 (21%), Positives = 110/263 (41%)
Query: 292 LTCGVEEAVRRWDVSSGNCLHVY-----------EKAGLGLVSCGWHPDRKWIFSGANDK 340
LT G + ++ W+V++ C++ E + L C P+R I + + +
Sbjct: 265 LTAGSKGVLKVWEVATAACVYSQPVPFEPVESEEEASEHSLTHCMLVPERNEIVTVSVEH 324
Query: 341 SICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEED 400
+I ++ +L ++ D++ G I + S L + + I
Sbjct: 325 NIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQILYG 384
Query: 401 QTITSFSLSRDNKFLL-VNLL-NQEIHLW--NIEGEVKLVAKYKGHKRSRFVIRSCFGGL 456
T T +L K L+ V+ ++ I +W N +G V VA+ GH + SC L
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAV-SC-SRL 442
Query: 457 EQAFIASGSEDSQVYIWH-------RASCDLIGALP---------GHSGAVNCVSWNPAN 500
+++F+ + S+D + +W+ +A LI GH +N V+ +P N
Sbjct: 443 KESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERGHDKDINSVAVSP-N 501
Query: 501 PHMLASASDDRTIRIWGLKDLNV 523
++A+ S DR ++W D ++
Sbjct: 502 DKLIATGSQDRLAKLWSCPDCSL 524
Score = 108 (43.1 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 35/156 (22%), Positives = 68/156 (43%)
Query: 275 HQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPD--RK 331
H PV+ + + S L T G + ++ WD+ C H K G+V +HPD R
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNL-KGSSGVVHLVEFHPDISRL 167
Query: 332 WIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA 391
+FS + D I +W+L + ++ L T+DG +I+ ++ ++ + +
Sbjct: 168 QLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKT 227
Query: 392 KVE-RYIEEDQTI-TSFSLSRDNKFLLVNLLNQEIH 425
+ R I +++ + L F + + Q +H
Sbjct: 228 RESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLH 263
Score = 103 (41.3 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 34/125 (27%), Positives = 53/125 (42%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
H V + F LA+ D + IW++ + T H L G V V + D
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDM-IKQYCT--HNLKGSSGVVHLVEFHPDIS 165
Query: 290 --QLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM-WE 346
QL + ++ +R WD++S C+ V + + S + D + S DK ICM W
Sbjct: 166 RLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDK-ICMVWN 224
Query: 347 LGGKE 351
L +E
Sbjct: 225 LKTRE 229
Score = 91 (37.1 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW 284
QIL GHT+ + L G S + D+S +W ++ +G V + GH V VS
Sbjct: 380 QILYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSC 439
Query: 285 SS-DDQQLLTCGVEEAVRRWDV 305
S + ++T + ++ W++
Sbjct: 440 SRLKESFVVTSSQDCTIKVWNI 461
Score = 79 (32.9 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 32/138 (23%), Positives = 60/138 (43%)
Query: 183 HLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHN 242
HLVE + R +F +S D + ++ D S+ + +L GH V L F+ +
Sbjct: 156 HLVEFHPDISRLQ-LFSSSMDYKIRIW-------DLNSSKCVAVLDGHFSAVTSLAFTAD 207
Query: 243 GKYLASSSNDRSAIIWEVDLNGGV-TLK-HK------LSGHQKPVSCVSWSSDDQQLLTC 294
G L SS D+ ++W + + T+ ++ L Q S + LT
Sbjct: 208 GNTLISSGRDKICMVWNLKTRESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLHFLTA 267
Query: 295 GVEEAVRRWDVSSGNCLH 312
G + ++ W+V++ C++
Sbjct: 268 GSKGVLKVWEVATAACVY 285
Score = 78 (32.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/110 (21%), Positives = 52/110 (47%)
Query: 412 NKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVY 471
++ L + + + LW ++ + + ++GH S V++ F ++ GS D +
Sbjct: 544 DQILATSSADGTLKLWGLQ-DFSCLKTFEGHDAS--VLKIIFVSRGTQLLSGGS-DGLLK 599
Query: 472 IWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDL 521
+W + + + L GH + + N + M+ +AS D +I +W KD+
Sbjct: 600 LWTIKTNECVKTLDGHEDKIWGLHTNKQDD-MVVTASSDSSITLW--KDV 646
Score = 70 (29.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 23/113 (20%), Positives = 50/113 (44%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCVSWSSDDQQLLTCG 295
+Q S +GK++ + +I D+ G L H L Q+ ++ S DD+ L+T
Sbjct: 31 VQVSRDGKFMFCPCGTKLNVI---DVETGALL-HSLEQDDQEDITSFVLSPDDEVLVTGS 86
Query: 296 VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFS-GANDKSICMWEL 347
+++W+ C+ ++ + V+ + + G D +I +W++
Sbjct: 87 RALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDM 139
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 140 (54.3 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 34/130 (26%), Positives = 63/130 (48%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH V + +S G YLAS+S D + IW+ + + + L GH+ V V+W+
Sbjct: 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVT-TLEGHENEVKSVAWAPS 116
Query: 288 DQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
L TC +++V W+V + C+ V + WHP ++ + S + D ++ +
Sbjct: 117 GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176
Query: 345 WELGGKELEC 354
++ G + C
Sbjct: 177 YQEEGDDWVC 186
Score = 139 (54.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 63/247 (25%), Positives = 98/247 (39%)
Query: 230 HTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS-GHQKPVSCVSWSSD 287
H D WFL ++ G LAS DR IW + + + K LS GHQ+ V V+WS
Sbjct: 14 HPDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWIC-KSVLSEGHQRTVRKVAWSPC 72
Query: 288 DQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
L + + W + + C+ E + S W P + + + DKS+ +W
Sbjct: 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVW 132
Query: 346 ELGGK-ELECWKGQRTLKISDLEV-TSDGKQIITMCKESALLLLDREAKVERYIEEDQTI 403
E+ + E EC +S L T D K ++ + L + V+ Y EE
Sbjct: 133 EVDEEDEYEC--------VSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEG--- 181
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLWNI--EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
D+ L E +W+I + + +A + R + R G EQ
Sbjct: 182 -------DDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVR-IWRQYLPGNEQGVA 233
Query: 462 ASGSEDS 468
SGS+ S
Sbjct: 234 CSGSDPS 240
Score = 120 (47.3 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/129 (24%), Positives = 60/129 (46%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH +EV + ++ +G LA+ S D+S +WEVD L+ H + V V W
Sbjct: 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP 160
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+ L + ++ V+ + + C E + S + P + + S ++D+++ +
Sbjct: 161 SQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRI 220
Query: 345 WE--LGGKE 351
W L G E
Sbjct: 221 WRQYLPGNE 229
Score = 103 (41.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 56/255 (21%), Positives = 103/255 (40%)
Query: 262 LNGGVTLKHKLSGHQKPVS-C--VSWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEK 316
+ + L+ ++ H P S C ++W+ L +CG + +R W + C V +
Sbjct: 1 MKDALVLQSRVPAH--PDSRCWFLAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSE 58
Query: 317 AGLGLV-SCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS----- 370
V W P ++ S + D + C+W+ + EC TL+ + EV S
Sbjct: 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC---VTTLEGHENEVKSVAWAP 115
Query: 371 DGKQIITMCKESALLL--LDREAKVERYI---EEDQTITSFSLSRDNKFLLVNLLNQEIH 425
G + T ++ ++ + +D E + E Q + + L + +
Sbjct: 116 SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175
Query: 426 LWNIEGEVKLV-AKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL 484
L+ EG+ + A +GH+ + + I F Q +AS S+D V IW + L
Sbjct: 176 LYQEEGDDWVCCATLEGHESTVWSI--AFDPSGQR-LASCSDDRTVRIWRQY-------L 225
Query: 485 PGHSGAVNCVSWNPA 499
PG+ V C +P+
Sbjct: 226 PGNEQGVACSGSDPS 240
Score = 92 (37.4 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 487 HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
HS VNCV+WNP +LAS SDD + W
Sbjct: 302 HSQDVNCVAWNPKEAGLLASCSDDGEVAFW 331
Score = 86 (35.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 42/177 (23%), Positives = 79/177 (44%)
Query: 204 RDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
RD S++ D+ + +L HT +V + + + + LAS+S D + +++ + +
Sbjct: 125 RDKSVWVWEVDEEDEY--ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGD 182
Query: 264 GGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW-DVSSGNCLHVYEKAGLGLV 322
V L GH+ V +++ Q+L +C + VR W GN E+ G+
Sbjct: 183 DWVCCA-TLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGN-----EQ---GVA 233
Query: 323 SCGWHPDRKWI--FSGANDKSI--CMW-ELGGKELECWKGQRTLKISDLEVTSDGKQ 374
G P K + SG + ++I W +L G L G +++ + + SD +Q
Sbjct: 234 CSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGA-LATACGDDAIRVFEEDPGSDPQQ 289
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 457 EQAFIASGSEDSQVYIW 473
E +AS S+D +V W
Sbjct: 315 EAGLLASCSDDGEVAFW 331
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 192 (72.6 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 69/303 (22%), Positives = 129/303 (42%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++P+ + I H EV +QFS + LA+ DR +WEV K LSG
Sbjct: 309 RVPTTAMCIFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEV-FGDKCEFKGSLSGSNA 367
Query: 278 PVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA 337
++ + + S LL + A R W V H ++S + D I SG+
Sbjct: 368 GITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGS 427
Query: 338 NDKSICMWELGGKELECWKGQRT-LKISDLEVTSDGKQIITMCKESALLLLD-REAKVER 395
+D+++ +W+L K C K +D+ T + +++ + + D R + R
Sbjct: 428 HDRTLKLWDLRSKV--CIKTVFAGSSCNDIVCTE--QCVMSGHFDKKIRFWDIRSESIVR 483
Query: 396 YIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRSCFG 454
+E IT+ L+ + LL + + + ++ V+ G K R F
Sbjct: 484 EMELLGKITALDLNPERTELLSCSRDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFS 543
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDDRTI 513
+ ++A+GS + +YIW S + L H ++N V+W+P+ H+++ + +
Sbjct: 544 P-DGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVAWSPSGSHVVSVDKGSKAV 602
Query: 514 RIW 516
+W
Sbjct: 603 -LW 604
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 189 (71.6 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 65/259 (25%), Positives = 113/259 (43%)
Query: 259 EVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG 318
+V+ N G L+ L GH + V++S D + L + + ++ WD +SG E
Sbjct: 25 KVEDNWGPELQ-TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHS 83
Query: 319 LGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITM 378
+ S + P+ + + SG++D +I +W L+ +E SD + +
Sbjct: 84 SSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLK----------HTMEGHSDRVESVAF 133
Query: 379 CKESALLLLDREAKVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
+ L ++ IE + S + S D + L + I LW+ L
Sbjct: 134 -SPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD-SATCGLKH 191
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
GH S +V+ F + +ASGS D+ + +W S L L GHS + ++++
Sbjct: 192 TLGGH--SNWVLPLVFSP-DGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFS 248
Query: 498 PANPHMLASASDDRTIRIW 516
P N +LAS S D TI++W
Sbjct: 249 P-NGQLLASGSSDATIKLW 266
Score = 145 (56.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 54/250 (21%), Positives = 106/250 (42%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
++GH+D V + FS NG+ +W + +LKH + GH V V++S
Sbjct: 121 MEGHSDRVESVAFSPNGQ------------LWNPAIG---SLKHTIEGHSDWVLSVAFSP 165
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D Q L + E+ ++ WD ++ H ++ + PD + + SG+ND +I +W+
Sbjct: 166 DGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWD 225
Query: 347 LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQT--IT 404
L+ + KI L + +G+ + + ++ + L D R+ + + +
Sbjct: 226 PPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVL 285
Query: 405 SFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASG 464
S S D++ L + I LW+ + K R+ ++RS +E + +
Sbjct: 286 SVVFSPDSQLLESGSGDNTIKLWDPATGI-----LKHSMRTPGIVRSIEFSIELPQLITN 340
Query: 465 SEDSQVYIWH 474
+ WH
Sbjct: 341 LGTFSIQAWH 350
Score = 144 (55.7 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 35/110 (31%), Positives = 59/110 (53%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
LQ L+GH+D + + FS +G+ LAS SND + +W+ +GG LK L GH V V+
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWD-PASGG--LKQTLEGHSSSVQSVA 90
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK-W 332
+S + Q L + + ++ W+ +S + H E + S + P+ + W
Sbjct: 91 FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLW 140
Score = 140 (54.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 64/258 (24%), Positives = 105/258 (40%)
Query: 263 NGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLV 322
+GG LK L GH V V++S + Q L + + ++ W+ +S + H E
Sbjct: 72 SGG--LKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTME------- 122
Query: 323 SCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKE 381
G H DR + S A + +W G +G +S + + DG+ + + E
Sbjct: 123 --G-HSDR--VESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLS-VAFSPDGQLLASGSAE 176
Query: 382 SALLLLDREAKVERYI--EEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAK 438
+ L D ++ + S D + L + I LW+ G +K +
Sbjct: 177 KTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLE 236
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNP 498
GH I S +ASGS D+ + +W A+ L GHS V V ++P
Sbjct: 237 --GHSNK---IESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSP 291
Query: 499 ANPHMLASASDDRTIRIW 516
+ +L S S D TI++W
Sbjct: 292 -DSQLLESGSGDNTIKLW 308
Score = 126 (49.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 56/253 (22%), Positives = 110/253 (43%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW 326
+LKH + GH V V++S + Q W+ + G+ H E ++S +
Sbjct: 116 SLKHTMEGHSDRVESVAFSPNGQL------------WNPAIGSLKHTIEGHSDWVLSVAF 163
Query: 327 HPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
PD + + SG+ +K+I +W+ L+ G + + L + DG+ + + ++ + L
Sbjct: 164 SPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKL 223
Query: 387 LDREA-KVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHK 443
D + ++ +E I S + S + + L + I LW+ G + K GH
Sbjct: 224 WDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLK--GH- 280
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
S V+ F Q + SGS D+ + +W A+ L ++ G V + ++ P +
Sbjct: 281 -SDMVLSVVFSPDSQ-LLESGSGDNTIKLWDPATGILKHSMRT-PGIVRSIEFSIELPQL 337
Query: 504 LASASDDRTIRIW 516
+ + +I+ W
Sbjct: 338 ITNLGTF-SIQAW 349
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 71/307 (23%), Positives = 131/307 (42%)
Query: 215 GRD-QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
G+D ++P+ + H EV +QFS + LA+ DR +WE K LS
Sbjct: 305 GKDVRVPTTASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEA-FGDKCEFKGSLS 363
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ + + S LL + A R W V H ++S + D I
Sbjct: 364 GSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI 423
Query: 334 FSGANDKSICMWELGGKELECWKGQRT-LKISDLEVTSDGKQIITMCKESALLLLD-REA 391
SG++D+++ +W+L K C K +D+ T + +++ + + D R
Sbjct: 424 VSGSHDRTLKLWDLRSKV--CIKTVFAGSSCNDIVCTE--QCVMSGHFDKKIRFWDIRSE 479
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIR 450
V R +E IT+ L+ + LL + + + ++ VK G K R
Sbjct: 480 SVVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTR 539
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASD 509
F + +++A+GS + +Y+W + + L HS ++N V+W P+ H+++
Sbjct: 540 VVFSP-DGSYVAAGSAEGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAPSGLHVVSVDKG 598
Query: 510 DRTIRIW 516
R + +W
Sbjct: 599 SRAV-LW 604
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 191 (72.3 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/306 (23%), Positives = 125/306 (40%)
Query: 214 CGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
C QIPS+ +L H EV + F N LA+ DR +W V + G + L
Sbjct: 323 CVSAQIPSQAQDVLDAHLSEVNAVCFGPNSSLLATGGADRLIHLWNV-VGGRLEANQTLE 381
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ V + Q+L +A + W V + + + R
Sbjct: 382 GAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDKVTAAKFKLTRHQA 441
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAK 392
+G+ D+++ W+LG C + L + V D II+ + + D R
Sbjct: 442 VTGSRDRTVKEWDLG--RAYCSRTINVLSYCNDVVCGD-HIIISGHNDQKIRFWDSRGPH 498
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
+ I +TS LS D LL + + + ++ ++ V + G K S ++
Sbjct: 499 CIQVIPVQGRVTSLHLSYDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKCSSDWTKA 558
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDD 510
F ++++ +GS + +YIW + L +L G H AVN V+W + H++ S
Sbjct: 559 VFSP-DRSYALAGSSNGDLYIWDVNTGKLETSLQGPHCTAVNAVAWCFSGNHVV-SVDQG 616
Query: 511 RTIRIW 516
R + +W
Sbjct: 617 RKVVLW 622
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 210 (79.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 76/329 (23%), Positives = 146/329 (44%)
Query: 216 RDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGH 275
+ QI Q + G D +S +G +AS+ D I++ NG L L GH
Sbjct: 1507 KPQIKDSCKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKAS-NGSELLT--LVGH 1563
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD-RKWIF 334
+SC S+S D + L + + V WD+ GN +H ++ + C + P +
Sbjct: 1564 SNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLM 1623
Query: 335 SGANDKSICMWELGGKEL-ECWKGQRTLKISDLEVTSDGKQIITMCKESALLL---LDRE 390
S A D SI ++ K + ++ + ++ + DG I + + + + D
Sbjct: 1624 SCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTI 1683
Query: 391 AK--VERYIEEDQT---ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
AK ++ I+ + I S S ++K +L + ++ L+++ + KL++ H +S
Sbjct: 1684 AKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQ-KLISVMGNHSKS 1742
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHRA-SCDLIGAL-PGHSGAVNCVSWNPANPHM 503
+ C + +I +GS+D+ +W L L PG A NC++++P P +
Sbjct: 1743 ---VNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWA-NCLAFSPTQP-L 1797
Query: 504 LASASDDRTIRIWGLKDLNVKRKDCHSNG 532
LA + D T+R++ + + R+ +G
Sbjct: 1798 LAVGATDCTVRLFDVSSNTIYREVAKLHG 1826
Score = 202 (76.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 75/318 (23%), Positives = 138/318 (43%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGK-YLASSSNDRSAIIWEV-DLNGGVTLKHKLSG 274
D I + + H+ V + +FS L S + D S II+ D N ++ S
Sbjct: 1592 DLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKN---IFRNFRSA 1648
Query: 275 HQKPVSCVSWSSDDQQLLTCGVEEAVRRWD----VSSGNCLHVYEKA-GLGLV-SCGWHP 328
H KPV+ WS D + + + ++ W+ ++ HV + + G + SC +
Sbjct: 1649 HSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSA 1708
Query: 329 DRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD 388
+ K I + + ++++ ++L G + ++ +++DG I+T ++ +
Sbjct: 1709 NSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWS 1768
Query: 389 RE--AKVERY-IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV--KLVAKYKGHK 443
++ + I D + S L V + + L+++ + VAK GH
Sbjct: 1769 STLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHT 1828
Query: 444 RSRFVIR-SCFGGLEQAFIASGSEDSQVYIW----HRASCDLIGALPGHSGAVNCVSWNP 498
R+ I S G L IAS SED + +W H+A + A H+ +NC+S+NP
Sbjct: 1829 RAITSITFSPSGNL----IASTSEDLLIKVWNVQTHKAEYTIEKA---HNDPINCISFNP 1881
Query: 499 ANPHMLASASDDRTIRIW 516
N L S SDD + ++W
Sbjct: 1882 TNECELISCSDDYSTKVW 1899
Score = 183 (69.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 59/280 (21%), Positives = 126/280 (45%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R + L GHT + + FS +G +AS+S D +W V + K H P++C
Sbjct: 1819 REVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEK--AHNDPINC 1876
Query: 282 VSWSSDDQ-QLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+S++ ++ +L++C + + + W + + E + + C + PD K+I + + D
Sbjct: 1877 ISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDC 1936
Query: 341 SICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEE- 399
SI ++ K+L T ++ + D K++++ + L + + + + E +
Sbjct: 1937 SIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKG 1996
Query: 400 -DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQ 458
+I ++D K+++ + + +W+ + ++ + + S V S G
Sbjct: 1997 HSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDVVSSSDASGR-- 2054
Query: 459 AFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNP 498
I S S+D + W+ + + L GHSG + V +NP
Sbjct: 2055 --IFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNP 2092
Score = 174 (66.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 66/284 (23%), Positives = 123/284 (43%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
L FS LA + D + +++V N KL GH + ++ +++S + +
Sbjct: 1789 LAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSE 1848
Query: 297 EEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKW-IFSGANDKSICMWELGGKELEC 354
+ ++ W+V + + EKA ++C ++P + + S ++D S +W
Sbjct: 1849 DLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTL 1908
Query: 355 WKGQRTLKISDLEVTSDGKQIITMCKES--ALLLLDREAKVERYIEEDQTITSFSLSRDN 412
T I + DGK I T+ ++ A+ L + + R + + S D+
Sbjct: 1909 STEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDS 1968
Query: 413 KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
K L+ + + +WNI+ + +L+ KGH S I F +Q +I S S D V +
Sbjct: 1969 KKLVSGGWDFNLRVWNIKTQKELLC-LKGHSSS---IEKAFFTKDQKYIISASFDGSVKV 2024
Query: 473 WHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
W I +L + + VS + A+ + +S SDD I+ W
Sbjct: 2025 WDAQFGSEITSLRHQTRISDVVSSSDASGRIFSS-SDDGIIKSW 2067
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 104 LDAEKVMDAL-KTLRAEIAPLCIKN 127
LD + D L KT+ E+ C+KN
Sbjct: 710 LDMQGERDLLVKTIFPELRARCLKN 734
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 60/291 (20%), Positives = 125/291 (42%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH D V + FS N K+LAS S D + +IW + ++ +GH+ V+CV++S
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRA---YRFTGHKDAVTCVNFSPS 72
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L + ++ VR W + V+ + S + D + + + ++DK++ +W
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWST 132
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITS 405
+ Q + + + DG+ I++ + + L D+ ++ V Y E +T
Sbjct: 133 HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ ++ + +W+ +LV Y+ H + + G ++ + S
Sbjct: 193 VDFHPSGTCIAAAGMDNTVKVWDTRTH-RLVQHYQLHSAAVNALSFHPSG---NYLITAS 248
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
DS + I L+ L GH G V+++ + + SD++ + +W
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ-VMVW 298
Score = 169 (64.5 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 58/256 (22%), Positives = 110/256 (42%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D V + FS +G LAS S D++ IW ++ G T+ H V V + SD
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTV---FRAHTATVRSVHFCSDG 115
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWEL 347
Q L+T ++ V+ W L + + V C + PD + I S ++DK++ +W+
Sbjct: 116 QLLVTASDDKTVKVWSTHRQRFLFSLTQH-INWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITS 405
+E + ++ ++ G I ++ + + D V+ Y + +
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNA 234
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
S +L+ + + + ++ E +L+ GH+ + F + F ASG
Sbjct: 235 LSFHPSGNYLITASSDSTLKILDLM-EGRLLYTLHGHQGPATTV--AFSRTGEYF-ASGG 290
Query: 466 EDSQVYIWHRASCDLI 481
D QV +W +++ D +
Sbjct: 291 SDEQVMVW-KSNFDTV 305
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 45/205 (21%), Positives = 93/205 (45%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ + HT V + F +G+ L ++S+D++ +W L+ H V C +S
Sbjct: 98 VFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQ---RFLFSLTQHINWVRCAKFS 154
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFSGANDKSICM 344
D + +++ ++ V+ WD +S C+H Y + G G V+ +HP I + D ++ +
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCIAAAGMDNTVKV 213
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQ-T 402
W+ L + ++ L G +IT +S L +LD E ++ + Q
Sbjct: 214 WDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGP 273
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLW 427
T+ + SR ++ ++++ +W
Sbjct: 274 ATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 154 (59.3 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 56/259 (21%), Positives = 114/259 (44%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC- 324
+L+ GH+ V+CV +S + + L + ++ + W + + Y G V+C
Sbjct: 10 SLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS--RAYRFTGHKDAVTCV 67
Query: 325 GWHPDRKWIFSGANDKSICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESA 383
+ P + SG+ DK++ +W K E ++ T + + SDG+ ++T +
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAH-TATVRSVHFCSDGQLLVTASDDKT 126
Query: 384 LLLLD--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG 441
+ + R+ + + + S D + ++ ++ + LW+ + V Y
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECVHSYCE 185
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H FV F A+G D+ V +W + L+ HS AVN +S++P+
Sbjct: 186 H--GGFVTYVDFHPSGTCIAAAGM-DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGN 242
Query: 502 HMLASASDDRTIRIWGLKD 520
+++ +AS D T++I L +
Sbjct: 243 YLI-TASSDSTLKILDLME 260
Score = 147 (56.8 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 38/105 (36%), Positives = 54/105 (51%)
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNP 498
+KGH R + L +ASGS DS + IWH GH AV CV+++P
Sbjct: 15 FKGH---RDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSP 71
Query: 499 ANPHMLASASDDRTIRIW--GLK-DLNVKRKDCHS-NGVHYCNGG 539
+ H+LAS S D+T+RIW +K + V R + VH+C+ G
Sbjct: 72 SG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
>UNIPROTKB|Q9BVC4 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9606 "Homo sapiens" [GO:0030838 "positive regulation of
actin filament polymerization" evidence=IEA] [GO:0032314
"regulation of Rac GTPase activity" evidence=IEA] [GO:0050731
"positive regulation of peptidyl-tyrosine phosphorylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032008
"positive regulation of TOR signaling cascade" evidence=IMP]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
[GO:0008543 "fibroblast growth factor receptor signaling pathway"
evidence=TAS] [GO:0031295 "T cell costimulation" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Pathway_Interaction_DB:pi3kciaktpathway
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007173 GO:GO:0008543 GO:GO:0008286 GO:GO:0048011
Pathway_Interaction_DB:mtor_4pathway Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031295
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112
GO:GO:0050731 GO:GO:0030838 GO:GO:0048015 GO:GO:0032314
GO:GO:0032956 EMBL:AC009065 KO:K08266 GO:GO:0032008 CTD:64223
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AY223837
EMBL:AK021536 EMBL:AK022227 EMBL:AK302201 EMBL:BC001313
EMBL:BC017119 EMBL:BC052292 EMBL:BC088354 EMBL:AF195883
IPI:IPI00007182 IPI:IPI00102926 IPI:IPI00420058
RefSeq:NP_001186102.1 RefSeq:NP_001186103.1 RefSeq:NP_001186104.1
RefSeq:NP_071767.3 UniGene:Hs.29203 ProteinModelPortal:Q9BVC4
SMR:Q9BVC4 IntAct:Q9BVC4 STRING:Q9BVC4 PhosphoSite:Q9BVC4
DMDM:74761285 PaxDb:Q9BVC4 PRIDE:Q9BVC4 DNASU:64223
Ensembl:ENST00000301724 Ensembl:ENST00000301725
Ensembl:ENST00000382450 Ensembl:ENST00000397124
Ensembl:ENST00000564088 Ensembl:ENST00000565250
Ensembl:ENST00000569417 GeneID:64223 KEGG:hsa:64223 UCSC:uc002coy.3
GeneCards:GC16P002254 H-InvDB:HIX0012725 HGNC:HGNC:24825
HPA:CAB019935 MIM:612190 neXtProt:NX_Q9BVC4 PharmGKB:PA165450213
GenomeRNAi:64223 NextBio:66155 Bgee:Q9BVC4 Genevestigator:Q9BVC4
Uniprot:Q9BVC4
Length = 326
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 65/298 (21%), Positives = 135/298 (45%)
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
LA++ D + W+ + G+ + + V+ + + D + G + +R +D+
Sbjct: 15 LATAGYDHTVRFWQA--HSGICTR-TVQHQDSQVNALEVTPDRSMIAAAGYQH-IRMYDL 70
Query: 306 SSGNCLHV--YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK-GQRTLK 362
+S N + Y+ + S G+H D +W+++G D + +W+L + L+C + Q
Sbjct: 71 NSNNPNPIISYDGVNKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAP 130
Query: 363 ISDLEVTSDGKQIITMCKESALLLLDREAKV-ERYIEEDQ-TITSFSLSRDNKFLLVNLL 420
I+ + + + ++I + A+ + D + E+ I E + +ITS + D ++
Sbjct: 131 INCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPEVSITSAHIDPDASYMAAVNS 190
Query: 421 NQEIHLWNIEG----EV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
++WN+ G EV +L+ K K +R+ ++ F + +A+ S D IW
Sbjct: 191 TGNCYVWNLTGGIGDEVTQLIPKTKIPAHTRYALQCRFSP-DSTLLATCSADQTCKIWRT 249
Query: 476 ASCDLIGALPGHSGAVNCVS----WNPA---NPHMLASASDDRTIRIWGLKDLNVKRK 526
++ L+ L SG S W A + + +AS D R+W ++ +KR+
Sbjct: 250 SNFSLMTELSIKSGNPGESSRGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKRE 307
>DICTYBASE|DDB_G0278733 [details] [associations]
symbol:aip1 "actin-interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0043327 "chemotaxis to cAMP" evidence=IGI]
[GO:0030041 "actin filament polymerization" evidence=IGI]
[GO:0030010 "establishment of cell polarity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0060187 "cell pole" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0001891 "phagocytic cup" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000152_GR
GO:GO:0008283 eggNOG:COG2319 GO:GO:0006909 GO:GO:0006935
GO:GO:0030042 EMBL:AAFI02000024 GO:GO:0001891 GO:GO:0030864
GO:GO:0006907 GO:GO:0060187 EMBL:U36936 RefSeq:XP_642008.1
ProteinModelPortal:P54686 STRING:P54686 EnsemblProtists:DDB0214916
GeneID:8621739 KEGG:ddi:DDB_G0278733 OMA:INGIAAW
ProtClustDB:CLSZ2430741 Uniprot:P54686
Length = 597
Score = 190 (71.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 81/312 (25%), Positives = 138/312 (44%)
Query: 220 PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
PSR +++GH V + F N L S+S D S + W DL+ G+ H+ +
Sbjct: 314 PSR---VIKGHNKLVGTIAFDKNAGSLYSASYDASLLQW--DLSTGLATNFTGPAHKNQI 368
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAND 339
+ + + D QL+TC ++++V+ +S Y ++ +G+ S P + FSG
Sbjct: 369 TSIKINGD--QLITCAMDDSVKISSISK----KTYGES-IGVDS----PAQAVAFSGDVV 417
Query: 340 KSICMWEL----GGKELE----CWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA 391
++ M + GGK + W+ ++ I+D EV+ GK K L
Sbjct: 418 VAVSMKTIYVIKGGKIVSQTAATWE-PTSVAINDTEVSVGGKDN----KIHVFTLSGNNL 472
Query: 392 KVERYIEEDQ-TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIR 450
++ + IT S S K+L N+E+ +W+ G+ AK KG I
Sbjct: 473 TASHTLDNHRGAITDLSYSPCGKYLASGCSNREVIVWS--GKE---AKSKGWVNHTARIN 527
Query: 451 SCFGGLEQAFIASGSEDSQVYIWH--RASCDLIGALPGHSGAVNCVSWNPANPHMLASAS 508
+ + F+AS S DSQ+YIW+ + + H G VN V + N + SA
Sbjct: 528 AVAWSNDSKFVASASLDSQIYIWNVENPTASPVQVKNSHLGGVNDVIYGSNNE--IFSAG 585
Query: 509 DDRTIRIWGLKD 520
++ I+IW + +
Sbjct: 586 NEGAIKIWNVSN 597
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 204 RDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
+D ++ G + S TL H + L +S GKYLAS ++R I+W
Sbjct: 458 KDNKIHVFTLSGNNLTASHTLD---NHRGAITDLSYSPCGKYLASGCSNREVIVWS---- 510
Query: 264 GGVTLKHK-LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEK-AGLGL 321
G K K H ++ V+WS+D + + + ++ + W+V + V K + LG
Sbjct: 511 -GKEAKSKGWVNHTARINAVAWSNDSKFVASASLDSQIYIWNVENPTASPVQVKNSHLGG 569
Query: 322 VSCGWHPDRKWIFSGANDKSICMWEL 347
V+ + IFS N+ +I +W +
Sbjct: 570 VNDVIYGSNNEIFSAGNEGAIKIWNV 595
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 174 (66.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 70/324 (21%), Positives = 131/324 (40%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGV-------TLKHKLSGHQ 276
L ++ H V L FS +G + SS D+ +IW++ + +++ + +
Sbjct: 185 LAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLQSHQATRTVPVFESVEAAVLLPE 244
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY-EKAG--LGLVSCGWHPDRKWI 333
+ V + S LT G + +R W+ +SG C++ + G GL C +
Sbjct: 245 ELVPKLDVKSKGLHFLTAGDQGLLRVWEAASGQCVYAQPQPPGPRQGLTHCTLAQSAGLL 304
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTS-DGKQIITMCKESALLLLDREAK 392
S D ++ ++E +L+ + ++ D+ + I+ +L + + +
Sbjct: 305 LSVTTDHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHIVVASNSPSLKVFELQTM 364
Query: 393 VERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLW--NIEGEVKLVAKYKGHKRSRFVI 449
+ + + + + R + +Q I +W N G V VA+ GH S I
Sbjct: 365 TCQILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGSGHTHSVGTI 424
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRASCDLI-GALPG--------------HSGAVNCV 494
C L++ F+ +GS+D V +W L G P H +N V
Sbjct: 425 --CCSRLKETFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSV 482
Query: 495 SWNPANPHMLASASDDRTIRIWGL 518
+ P N +LA+ S DRT ++W L
Sbjct: 483 AVAP-NDKLLATGSQDRTAKLWAL 505
Score = 126 (49.4 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 26/74 (35%), Positives = 43/74 (58%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+A+GS+D +W C L+G GH + CV ++P + +LA+AS D TI++W L+D
Sbjct: 491 LATGSQDRTAKLWALPHCQLLGIFSGHRRGLWCVQFSPMD-QVLATASADGTIKLWALQD 549
Query: 521 LN-VKRKDCHSNGV 533
+ +K + H V
Sbjct: 550 FSCLKTFEGHDASV 563
Score = 120 (47.3 bits), Expect = 0.00094, P = 0.00094
Identities = 71/331 (21%), Positives = 128/331 (38%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
HT V + F LA+ D + +W++ + G H G V V++ D
Sbjct: 105 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGT---HHFRGSPGVVHLVTFHPDPA 161
Query: 290 QLL--TCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+LL + + +R W + +CL V + S + D + S DK +W+L
Sbjct: 162 RLLLFSSAADATIRMWSLQDQSCLAVMTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 221
Query: 348 GGKE-------LECWKGQRTLK---ISDLEVTSDGKQIITMCKESALLLLDREAKVERYI 397
+ E + L + L+V S G +T + L + + + Y
Sbjct: 222 QSHQATRTVPVFESVEAAVLLPEELVPKLDVKSKGLHFLTAGDQGLLRVWEAASGQCVYA 281
Query: 398 EED-----QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSC 452
+ Q +T +L++ LL + + L+ ++L ++ G+ +R
Sbjct: 282 QPQPPGPRQGLTHCTLAQSAGLLLSVTTDHNLLLYEARS-LQLQKQFAGYSEEVLDVR-- 338
Query: 453 FGGLEQAFI--ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F G E + I AS S +V+ +C + L GH+ V + + AS + D
Sbjct: 339 FLGPEDSHIVVASNSPSLKVFELQTMTCQI---LHGHTDIVLALDVFRKG-RLFASCAKD 394
Query: 511 RTIRIWGLKDLNVKRKDCHSNGV-HYCNGGT 540
++I IW + R C + G H + GT
Sbjct: 395 QSICIWRMNKAG--RVACVAQGSGHTHSVGT 423
Score = 116 (45.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQK 277
++ + T QIL GHTD V L G+ AS + D+S IW ++ G V + SGH
Sbjct: 360 ELQTMTCQILHGHTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGSGHTH 419
Query: 278 PVSCVSWSSDDQQLLTCGVEEA-VRRWDV 305
V + S + L G ++ V+ W +
Sbjct: 420 SVGTICCSRLKETFLVTGSQDCTVKLWPI 448
Score = 62 (26.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 17/89 (19%), Positives = 39/89 (43%)
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGL 319
+D+ G L+ Q+ ++ S DDQ L+T + +W G+ +++
Sbjct: 47 LDVASGAVLRSLEQEDQEDITAFELSPDDQVLVTATRALLLAQWAWREGSITRLWKAIHT 106
Query: 320 GLVSC-GWHPDRKWIFSGANDKSICMWEL 347
V+ + P + +G D ++ +W++
Sbjct: 107 APVATMAFDPTSTLLATGGCDGAVRVWDI 135
Score = 41 (19.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 43 AHLEEESGIP-LHSSMVNLFTQQILDGHWDESLAT-LSKIGLVDESVVKSASFLI 95
+H+ S P L + T QIL GH D LA + + G + S K S I
Sbjct: 345 SHIVVASNSPSLKVFELQTMTCQILHGHTDIVLALDVFRKGRLFASCAKDQSICI 399
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 190 (71.9 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 71/306 (23%), Positives = 126/306 (41%)
Query: 214 CGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
C QIPS+ +L H EV + F+ N LA+ DR +W V + G + L
Sbjct: 323 CVSAQIPSQAQDVLDAHLSEVNAVCFAPNSSLLATGGADRLIHLWNV-VGGRLEANQTLE 381
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G ++ V + Q+L +A + W V + + + R
Sbjct: 382 GAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGETQSKETLSGHKDKVTAAKFKLTRHQA 441
Query: 334 FSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAK 392
+G+ D+++ W+LG C + L + V D II+ + + D R
Sbjct: 442 VTGSRDRTVKEWDLG--RAYCSRTINVLSYCNDVVCGD-HIIISGHNDQKIRFWDSRGPH 498
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIE-GEVKLVAKYKGHKRSRFVIRS 451
+ I +TS +LS D LL + + + ++ ++ V + G K S ++
Sbjct: 499 CIQVIPVQGRVTSLNLSHDQLHLLSCSRDNTLKVIDLRISNIRQVFRADGFKCSSDWTKA 558
Query: 452 CFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPG-HSGAVNCVSWNPANPHMLASASDD 510
F ++++ GS + +YIW + L +L G H AVN V+W + H++ S
Sbjct: 559 VFSP-DRSYALVGSSNGTLYIWDVNTGKLETSLQGPHCTAVNAVAWCFSGNHVV-SVDQV 616
Query: 511 RTIRIW 516
R + +W
Sbjct: 617 RKVVLW 622
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 146 (56.5 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 407 SLSRDNK--FLLVNLLNQEIHLWN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIAS 463
SLS+D+ +L + + I+L+N + + V + G + F +R+ + ++ S
Sbjct: 297 SLSQDSSGTYLTASCKDNRIYLYNTLRLDKGPVQSFSGCRIDSFFVRTMISP-DGEYVLS 355
Query: 464 GSEDSQVYIW--HRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
GS D YIW ++ D I L GH V V W+P+ +A+ASDD T+R+W +++
Sbjct: 356 GSSDGNAYIWQVNKPQVDPI-ILKGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIEN 413
Score = 90 (36.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 21/75 (28%), Positives = 31/75 (41%)
Query: 275 HQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVY-EKAGLGLVSCGWHPDRK-W 332
H + +SW D LLT ++ ++ WDV C V G C HP
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCS-HPTNSDL 185
Query: 333 IFSGANDKSICMWEL 347
+ SG+ D +W+L
Sbjct: 186 LVSGSRDGCFALWDL 200
Score = 57 (25.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 24/117 (20%), Positives = 46/117 (39%)
Query: 200 NSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
NSS + + HQ ++ R H + ++ + + L ++S D++ +W+
Sbjct: 100 NSSSKKFASSATHQENTEKARFRDWI---AHYNAIFDISWIKGDSCLLTASGDQTIKVWD 156
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAV-RRWDVSSGNCLHVYE 315
V+ N + L GH V + + LL G + WD+ + H E
Sbjct: 157 VEENKCTGV---LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLRCKSSSHKEE 210
Score = 37 (18.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 330 RKWI--FSGANDKSICMWELGGKELECWKGQRTLKISDLE 367
R WI ++ D S W G L G +T+K+ D+E
Sbjct: 122 RDWIAHYNAIFDIS---WIKGDSCLLTASGDQTIKVWDVE 158
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 186 (70.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 70/307 (22%), Positives = 128/307 (41%)
Query: 230 HTDEVWFLQFSH-NGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
H D V+ + + + AS D IW++ + +L+GH+ + + WS D
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQIC---QLTGHKDSIVAIDWSFDG 116
Query: 289 QQLLTCGVEEAVRRWDVSSG-NCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T G++ VR W S+G + +E +V WHP ++ +G ND SI MW L
Sbjct: 117 TYIATGGMDSQVRLWKSSTGFEFITAFETVD-EIVWLSWHPKGLFLAAGCNDGSIWMWSL 175
Query: 348 -GGKELECWKGQRT-LKISDLEVTSDGKQIITMCKESALLLLDR-----EAKVE----RY 396
GK ++ G + GK++ T+ L++ + E ++ R+
Sbjct: 176 PSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATGAPECRMSSDDHRF 235
Query: 397 IE-EDQTI---TSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSC 452
++T TSF + + L + + ++ + NI ++A + S I C
Sbjct: 236 DPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSS-HILASLEAQTESVEAIALC 294
Query: 453 FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
A S D V ++ AS +LP ++C + P P++L + +D
Sbjct: 295 TA---LPICACASVDGTVALYDSASLKFRKSLPHEQAVIDC-KFLPNTPYLLTACADC-V 349
Query: 513 IRIWGLK 519
IR W ++
Sbjct: 350 IRKWDVR 356
>FB|FBgn0013548 [details] [associations]
symbol:l(2)dtl "lethal-(2)-denticleless" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 EMBL:AE013599
GO:GO:0005737 GO:GO:0006950 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0007049
KO:K11790 GeneTree:ENSGT00530000064210 EMBL:X83414 EMBL:X98094
EMBL:AY121647 PIR:S51748 RefSeq:NP_524871.1 UniGene:Dm.1775
ProteinModelPortal:Q24371 SMR:Q24371 MINT:MINT-969616 STRING:Q24371
PaxDb:Q24371 EnsemblMetazoa:FBtr0072085 GeneID:46326
KEGG:dme:Dmel_CG11295 UCSC:CG11295-RA FlyBase:FBgn0013548
InParanoid:Q24371 OMA:IWDIRAN OrthoDB:EOG42FQZF PhylomeDB:Q24371
GenomeRNAi:46326 NextBio:838821 Bgee:Q24371 GermOnline:CG11295
Uniprot:Q24371
Length = 769
Score = 191 (72.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 78/314 (24%), Positives = 132/314 (42%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
Q H + V+ L+++ S+S D +A +WEV G+ + GH + V ++
Sbjct: 98 QCHFNAVFDLEWAPGQMRFVSASGDHTARLWEV-AGSGIRGLNSYVGHTRSVKSAAFKRT 156
Query: 288 DQQLL-TCGVEEAVRRWDVSSG----------NCLHVYEKAGLGL-VSCGWHPDRK-WIF 334
D + T G + A+ WD+ + NC++ G G VS R +
Sbjct: 157 DPAVFATGGRDGAILIWDIRANLNMDLTSRVDNCIYSGHTGGPGTPVSQRKQRTRTPKMA 216
Query: 335 SGANDKSICMWELGGKE--LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK 392
G SI + + C G +K+ DL ++ T K+ L R
Sbjct: 217 GGTTSSSITGLAFQDNDTLISCGAGDGVIKVWDL------RRNYTAYKKEPL---PRHKL 267
Query: 393 VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEG-EVKLVAKYKGHKRSRFVIRS 451
+ T+ + L N ++ I+ +N+ + +A YKG S F I+S
Sbjct: 268 PYAGSSTFRGFTNLIVDASGTRLYANCMDNTIYCYNLASYSQRPLACYKGLLNSTFYIKS 327
Query: 452 CFGGLEQAFIASGSEDSQVYIWH--RASCDLIGALPGHSGAVNCVSWNPANPHMLASASD 509
C + ++ SGS D + YIW+ A L+ AL GH+ V CV+W ++ + + SD
Sbjct: 328 CLSP-DGKYLLSGSSDERAYIWNLDHAEEPLV-ALAGHTVEVTCVAWGSSHDCPIVTCSD 385
Query: 510 DRTIRIWGL-KDLN 522
D +IW + DL+
Sbjct: 386 DARHKIWRIGPDLD 399
>TAIR|locus:2090146 [details] [associations]
symbol:AT3G15470 "AT3G15470" species:3702 "Arabidopsis
thaliana" [GO:0004871 "signal transducer activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AB022218 EMBL:AC024081 HOGENOM:HOG000239143
EMBL:AF372960 EMBL:AY081717 IPI:IPI00541904 RefSeq:NP_566515.1
UniGene:At.11977 UniGene:At.48664 ProteinModelPortal:Q9LDG7
SMR:Q9LDG7 STRING:Q9LDG7 PaxDb:Q9LDG7 PRIDE:Q9LDG7
EnsemblPlants:AT3G15470.1 GeneID:820786 KEGG:ath:AT3G15470
TAIR:At3g15470 InParanoid:Q9LDG7 OMA:GMASTEN PhylomeDB:Q9LDG7
ProtClustDB:CLSN2917135 Genevestigator:Q9LDG7 Uniprot:Q9LDG7
Length = 883
Score = 153 (58.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 53/214 (24%), Positives = 101/214 (47%)
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHP-DRK 331
GH V ++WS Q LL+ +++ VR W++SS CL V+ + V+C ++P D +
Sbjct: 511 GHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFSHSDY--VTCIQFNPVDDR 567
Query: 332 WIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIIT-MCKESALLLLDRE 390
+ SG+ D + +W + +++ W + ++ T DG+ ++ K S + +
Sbjct: 568 YFISGSLDAKVRVWSIPDRQVVDWYDLHEM-VTSACYTPDGQGVLVGSYKGSCRMYSASD 626
Query: 391 AKVERYIE----------EDQTITSFS-LSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY 439
K+++ + + IT F + + +LV + I + ++G LV K
Sbjct: 627 NKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRV--VDG-TDLVNKL 683
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
KG + + I + + ++ S SEDS VYIW
Sbjct: 684 KGFRNTSSQISASITA-DGKYVVSASEDSHVYIW 716
Score = 132 (51.5 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 48/230 (20%), Positives = 103/230 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS- 286
QGH D+V L +S + ++L SSS D++ +W +L+ LK + H V+C+ ++
Sbjct: 510 QGHVDDVLDLAWSKS-QHLLSSSMDKTVRLW--NLSSQTCLK--VFSHSDYVTCIQFNPV 564
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
DD+ ++ ++ VR W + + Y+ + +C + PD + + G+ S M+
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSAC-YTPDGQGVLVGSYKGSCRMYS 623
Query: 347 LGGKELECWKGQRTL----------KISDLE-VTSDGKQIITMCKESALLLLDREAKVER 395
+L+ K Q L KI+ + V +++ +S + ++D V +
Sbjct: 624 ASDNKLQ-QKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSSDSRIRVVDGTDLVNK 682
Query: 396 Y--IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
+ S S++ D K+++ + +++W E ++ +K
Sbjct: 683 LKGFRNTSSQISASITADGKYVVSASEDSHVYIWKYESPASRPSRSNNNK 732
Score = 93 (37.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+ S S D V +W+ +S + HS V C+ +NP + S S D +R+W + D
Sbjct: 527 LLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPD 585
Query: 521 LNV 523
V
Sbjct: 586 RQV 588
Score = 88 (36.0 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 225 QILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
Q +Q H +W ++FS +GKYLAS+ D IW+V
Sbjct: 407 QEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>TAIR|locus:2035179 [details] [associations]
symbol:AT1G52730 "AT1G52730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 HSSP:P16649 EMBL:AC008016
HOGENOM:HOG000174258 KO:K13137 ProtClustDB:CLSN2687815
EMBL:BT008315 EMBL:AK227970 EMBL:AK317364 IPI:IPI00547978
RefSeq:NP_175682.2 RefSeq:NP_849800.1 UniGene:At.28102
UniGene:At.67869 ProteinModelPortal:Q9SSS7 SMR:Q9SSS7 IntAct:Q9SSS7
STRING:Q9SSS7 PaxDb:Q9SSS7 PRIDE:Q9SSS7 DNASU:841706
EnsemblPlants:AT1G52730.1 EnsemblPlants:AT1G52730.2 GeneID:841706
KEGG:ath:AT1G52730 TAIR:At1g52730 InParanoid:Q9SSS7 OMA:EDMWVRV
PhylomeDB:Q9SSS7 Genevestigator:Q9SSS7 Uniprot:Q9SSS7
Length = 343
Score = 184 (69.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 75/321 (23%), Positives = 138/321 (42%)
Query: 225 QILQGHTDEVWFLQFSH---NGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
Q+ GH+ V L +S +G +L S+S D ++ + + GH+ V
Sbjct: 10 QVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGT---FEGHKGAV-- 64
Query: 282 VSWSS--DDQQL--LTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGA 337
WSS D+ L + + + + WD +G+ LH +E + + +C + D K + +G
Sbjct: 65 --WSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHI-VRACAFSEDTKSLLTGG 121
Query: 338 NDKSICMWELGGKELECWKGQRTL-KISDLEVTSDGKQIITMCKE-SALLLLD-REAKVE 394
+K + ++++ + + ++ I L + I++ C + + L D R K+
Sbjct: 122 FEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIV 181
Query: 395 RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG 454
+ +E +TS +S+D +++ + W+ LV Y
Sbjct: 182 QTLETKSPVTSAEVSQDGRYI-TTADGSTVKFWDAN-HFGLVKSYDMPCNIESASLEPKS 239
Query: 455 GLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIR 514
G + F+A G ED V ++ + + IG GH G V+CV + P AS S+D TIR
Sbjct: 240 G--EKFVAGG-EDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSY-ASGSEDGTIR 295
Query: 515 IWGLKDLNVKRKDCHSNGVHY 535
IW N + + S V +
Sbjct: 296 IWQTTPANPEENETSSRRVKH 316
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 63/271 (23%), Positives = 115/271 (42%)
Query: 248 SSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA-VRRWDVS 306
+SS D A IW++ L + LSGH V+CV W D ++ G ++ ++ W+ +
Sbjct: 216 TSSKDGDARIWDITLKKSIIC---LSGHTLAVTCVKWGGDG--IIYTGSQDCTIKMWETT 270
Query: 307 SGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDL 366
G + + G + S + + +GA D + + ++ + + K
Sbjct: 271 QGKLIRELKGHGHWINSLALSTEYV-LRTGAFDHTGRQYPPNEEKQKALERYNKTKGDSP 329
Query: 367 EVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHL 426
E G TM + ++ K +R Q + S D K++ ++ + L
Sbjct: 330 ERLVSGSDDFTMFLWEPSV--SKQPK-KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 427 WN-IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALP 485
WN I G+ V ++GH + + + + SGS+DS + IW + L LP
Sbjct: 387 WNGITGQ--FVTVFRGHVGPVYQVS---WSADSRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Query: 486 GHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
GH+ V V W+P + + S DR +++W
Sbjct: 442 GHADEVFAVDWSP-DGEKVVSGGKDRVLKLW 471
Score = 186 (70.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 72/306 (23%), Positives = 137/306 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSW--- 284
+GH + V + +S +GK+L S S W G L+GH+K ++ +SW
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNP--KKGELEGSPLTGHKKWITGISWEPV 205
Query: 285 --SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SS ++ +T + R WD++ + L + W D I++G+ D +I
Sbjct: 206 HLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTI 264
Query: 343 CMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ 401
MWE GK + KG I+ L ++++ + + A R+ E+ +
Sbjct: 265 KMWETTQGKLIRELKGHGHW-INSLALSTE-----YVLRTGAFDHTGRQYPPNE--EKQK 316
Query: 402 TITSFSLSR-DNKFLLVNLLNQ-EIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
+ ++ ++ D+ LV+ + + LW + + GH++ ++ + +
Sbjct: 317 ALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQ---LVNHVYFSPDGK 373
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
+IAS S D V +W+ + + GH G V VSW+ A+ +L S S D T++IW ++
Sbjct: 374 WIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWS-ADSRLLLSGSKDSTLKIWEIR 432
Query: 520 DLNVKR 525
+K+
Sbjct: 433 TKKLKQ 438
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 78/308 (25%), Positives = 138/308 (44%)
Query: 221 SRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVS 280
+R Q + GH + V + FS +GK LAS S D + +W DL L GH+ V
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLW--DLYTETPL-FTCKGHKNWVL 155
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSGNC----LHVYEKAGLGLVSCGWH---PDRKWI 333
V+WS D + L++ + W+ G L ++K G+ H P R+++
Sbjct: 156 TVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV 215
Query: 334 FSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR-EA 391
S + D +W++ K + C G TL ++ ++ DG I T ++ + + + +
Sbjct: 216 TS-SKDGDARIWDITLKKSIICLSGH-TLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQG 272
Query: 392 KVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVI 449
K+ R ++ I S +LS + L + + E + K + +Y K
Sbjct: 273 KLIRELKGHGHWINSLALSTEY-VLRTGAFDHTGRQYPPNEEKQKALERYNKTK------ 325
Query: 450 RSCFGGLEQAFIASGSEDSQVYIWHRA-SCDLIGALPGHSGAVNCVSWNPANPHMLASAS 508
G + + SGS+D +++W + S L GH VN V ++P + +ASAS
Sbjct: 326 ----GDSPERLV-SGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSP-DGKWIASAS 379
Query: 509 DDRTIRIW 516
D+++R+W
Sbjct: 380 FDKSVRLW 387
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 35/120 (29%), Positives = 60/120 (50%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GH V + FS +GK++AS+S D+S +W VT+ GH PV VSWS+
Sbjct: 356 LTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTV---FRGHVGPVYQVSWSA 412
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
D + LL+ + ++ W++ + + + W PD + + SG D+ + +W+
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLWK 472
Score = 145 (56.1 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 36/142 (25%), Positives = 78/142 (54%)
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
L S S+D + +WE ++ K +L+GHQ+ V+ V +S D + + + +++VR W+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQP--KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 306 SSGNCLHVYEKAGLGLV-SCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKIS 364
+G + V+ + +G V W D + + SG+ D ++ +WE+ K+L+ ++
Sbjct: 390 ITGQFVTVF-RGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVF 448
Query: 365 DLEVTSDGKQIITMCKESALLL 386
++ + DG+++++ K+ L L
Sbjct: 449 AVDWSPDGEKVVSGGKDRVLKL 470
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 86/311 (27%), Positives = 128/311 (41%)
Query: 223 TLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
T IL GH + +++S G+YLAS+S D + IW +G L GH+ V
Sbjct: 50 TKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKS-SGEFECNATLEGHENEVKS 108
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
VSWS L TC +++V W+V+ + C V + WHP ++ + S +
Sbjct: 109 VSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEVLASASY 168
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIE 398
D +I M+ + + W TL TS S + +D +A ER +
Sbjct: 169 DNTIKMYAEDPVDND-WDCTATL-------TSH---------TSTIWGIDFDADGERLVS 211
Query: 399 --EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG-HKRSRFVIRSC-FG 454
+D TI + V +Q+ +W K V G H R+ + + C
Sbjct: 212 CSDDTTIKIWKAYHPGNSAGVATPDQQT-VW------KCVCTLSGQHSRAIYDVSWCKLT 264
Query: 455 GLEQAFIASGSEDSQVYIWHRAS--------CDLIGALPG-HSGAVNCVSWNPANPHMLA 505
GL IA+ D + I+ S + + A G H VN V WNP L
Sbjct: 265 GL----IATACGDDGIRIFKETSDSKPDEPTFEQLTAEEGAHDQDVNSVQWNPVVAGQLI 320
Query: 506 SASDDRTIRIW 516
S SDD TI+IW
Sbjct: 321 SCSDDGTIKIW 331
Score = 142 (55.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 39/133 (29%), Positives = 58/133 (43%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGV-TLKHKLS-GHQKPVSCVSW 284
LQGH +W + + G AS D++ IW L G + K LS GH++ + + W
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWS--LTGSTWSTKTILSDGHKRTIREIRW 67
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
S Q L + + W SSG C E + S W + + + DKS+
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSV 127
Query: 343 CMWELGGK-ELEC 354
+WE+ G E EC
Sbjct: 128 WIWEVAGDDEFEC 140
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 65/309 (21%), Positives = 131/309 (42%)
Query: 210 TDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLK 269
T H C D PS +GH D V + FS N K LAS S D ++W + T
Sbjct: 2 TAH-CPED--PSLERHF-KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQ---TRA 54
Query: 270 HKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPD 329
++ +GH+ V+CV++S L + ++ VR W + V+ + S + D
Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114
Query: 330 RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR 389
+ + ++DK++ +W ++ Q + + + DG+ I++ + + L D+
Sbjct: 115 GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 390 EAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
++ V Y E +T + ++ + +W++ +L+ Y+ H +
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVN 233
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
+ G ++ + S DS + I L+ L GH G V+++ + +
Sbjct: 234 ALSFHPSG---NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 508 SDDRTIRIW 516
SD++ + +W
Sbjct: 291 SDEQ-VMVW 298
Score = 146 (56.5 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 38/105 (36%), Positives = 55/105 (52%)
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNP 498
+KGH R + S L +ASGS DS + +WH GH AV CV+++P
Sbjct: 15 FKGH---RDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSP 71
Query: 499 ANPHMLASASDDRTIRIW--GLK-DLNVKRKDCHS-NGVHYCNGG 539
+ H+LAS S D+T+RIW +K + V R + VH+C+ G
Sbjct: 72 SG-HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 66/273 (24%), Positives = 123/273 (45%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
L+ +H+ Y+A++ N ++ + +EV+ N GH+ V+ V + + + + T
Sbjct: 39 LEITHDKLYIAAAGNPQTRL-FEVNTNNNSPAM-SFDGHKGNVTGVGFQKEGKWMYTGSE 96
Query: 297 EEAVRRWDVSSGNCLHVYE-KAGLGLVSCGWHPDRKWIFSGANDKSICMWEL----GGKE 351
+ V+ WD+ + C YE A + V HP++ + SG + SI +W+L +E
Sbjct: 97 DGTVKIWDLKAPGCQRDYECSAPVNTVVL--HPNQAELISGDQNGSIRVWDLISNTCSRE 154
Query: 352 LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL----DREAKVE--RYIE-EDQTIT 404
L G+ + I+ L ++SDG ++ + + D ++ E + IE + I
Sbjct: 155 LVP-DGE--VGITSLTISSDGGLVVASNTKGKCFVWRLGEDDTSRFEPLQKIEAHNAPIL 211
Query: 405 SFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASG 464
S D K L + + +WN + + +V GH+R + C + A++ +G
Sbjct: 212 KTLFSPDTKLLATCSADHTVKIWNTK-KFNVVQTLNGHQRW---VWDCAFSNDSAYLVTG 267
Query: 465 SEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
S D +W D + GH AVN V+ N
Sbjct: 268 SSDHLSRLWDLHQGDAVKTYSGHIKAVNAVALN 300
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 62/305 (20%), Positives = 134/305 (43%)
Query: 243 GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRR 302
G LA++S D + W+ +GG + + ++ + + D + G + R
Sbjct: 3 GIILATASYDHTIKFWDPP-SGGCY--RSIDCGEFHINRLEITHDKLYIAAAGNPQT-RL 58
Query: 303 WDVSSGNCLHVYEKAG-LGLVS-CGWHPDRKWIFSGANDKSICMWELGGKELECWKGQR- 359
++V++ N G G V+ G+ + KW+++G+ D ++ +W+L K C +
Sbjct: 59 FEVNTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDGTVKIWDL--KAPGCQRDYEC 116
Query: 360 TLKISDLEVTSDGKQIITMCKESALLLLDREAKV-ERYIEEDQT--ITSFSLSRDNKFLL 416
+ ++ + + + ++I+ + ++ + D + R + D ITS ++S D ++
Sbjct: 117 SAPVNTVVLHPNQAELISGDQNGSIRVWDLISNTCSRELVPDGEVGITSLTISSDGGLVV 176
Query: 417 VNLLNQEIHLWNIEGE-----VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVY 471
+ + +W + GE + + K + H ++++ F + +A+ S D V
Sbjct: 177 ASNTKGKCFVWRL-GEDDTSRFEPLQKIEAHNAP--ILKTLFSP-DTKLLATCSADHTVK 232
Query: 472 IWHRASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCH 529
IW+ +++ L GH V +C N + L + S D R+W L + VK H
Sbjct: 233 IWNTKKFNVVQTLNGHQRWVWDCAFSNDSA--YLVTGSSDHLSRLWDLHQGDAVKTYSGH 290
Query: 530 SNGVH 534
V+
Sbjct: 291 IKAVN 295
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 188 (71.2 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 73/311 (23%), Positives = 136/311 (43%)
Query: 219 IPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKP 278
+PS+ + GH E++ + F+ G LA+ D+ +W+V ++G K L G +
Sbjct: 312 LPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDV-ISG--QQKSTLLGASQS 368
Query: 279 VSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
+ VS+S +D+ +L + + R W+ G H +G V G + + +G++
Sbjct: 369 IVSVSFSPNDESILGTSNDNSARLWNTELGRSRHTLT-GHIGKVYTGKFINSNRVVTGSH 427
Query: 339 DKSICMWELG-G---KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREA--- 391
D++I +W+L G + + C+ L I + G + + + ++ D A
Sbjct: 428 DRTIKLWDLQKGYCTRTIFCFSSCNDLVI----LGGSGTHLASGHVDHSVRFWDSNAGEP 483
Query: 392 -KVERYIEEDQTITSFSLSRDN-KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK-RSRFV 448
+V I E Q ITS + S N +L N + + + +I + +K + R+
Sbjct: 484 TQVLSSIHEGQ-ITSITNSPTNTNQILTNSRDHTLKIIDIR-TFDTIRTFKDPEYRNGLN 541
Query: 449 IRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALP---GHSGAVNCVSWNPANPHMLA 505
+ +IASGS D + IW + + L + +V C SW+P ++
Sbjct: 542 WTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPL-ANIFI 600
Query: 506 SASDDRTIRIW 516
SA D+ I W
Sbjct: 601 SADKDKNIIQW 611
Score = 141 (54.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 64/292 (21%), Positives = 124/292 (42%)
Query: 196 CMFHNSSDRDMSLYTDHQCGR--DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDR 253
CM NS ++ +C + D I + L G + + + FS N + + +SND
Sbjct: 329 CMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDN 388
Query: 254 SAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLH- 312
SA +W +L +H L+GH V + + ++ ++T + ++ WD+ G C
Sbjct: 389 SARLWNTELGRS---RHTLTGHIGKVYTGKFINSNR-VVTGSHDRTIKLWDLQKGYCTRT 444
Query: 313 VYEKAGLG-LVSCGWHPDRKWIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVT- 369
++ + LV G + SG D S+ W+ G+ + +I+ + +
Sbjct: 445 IFCFSSCNDLVILGGSGTH--LASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSP 502
Query: 370 SDGKQIITMCKESALLLLD-REAKVERYIEEDQ-----TITSFSLSRDNKFLLVNLLNQE 423
++ QI+T ++ L ++D R R ++ + T S S D +++ ++
Sbjct: 503 TNTNQILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGS 562
Query: 424 IHLWNI-EGE-VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
I +W+ G+ VK++ K H V + L FI S +D + W
Sbjct: 563 ICIWDATNGKTVKVLTKV--HNNGSSVCCCSWSPLANIFI-SADKDKNIIQW 611
Score = 124 (48.7 bits), Expect = 0.00024, P = 0.00024
Identities = 70/285 (24%), Positives = 115/285 (40%)
Query: 269 KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHP 328
K + +GH + C++++S L T G ++ V+ WDV SG A +VS + P
Sbjct: 317 KKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSP 376
Query: 329 DRKWIFSGANDKSICMW--ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
+ + I +ND S +W ELG + G + + S+ +++T + + L
Sbjct: 377 NDESILGTSNDNSARLWNTELG-RSRHTLTGHIGKVYTGKFINSN--RVVTGSHDRTIKL 433
Query: 387 LDREAKVERYIEEDQTITSFSLSRD-------NKFLLVNLLNQEIHLWNIE-GEVKLVAK 438
D + + Y +TI FS D L ++ + W+ GE V
Sbjct: 434 WDLQ---KGYCT--RTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLS 488
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGAL--PGHSGAVNCV-- 494
H+ I + Q I + S D + I + D I P + +N
Sbjct: 489 -SIHEGQITSITNSPTNTNQ--ILTNSRDHTLKIIDIRTFDTIRTFKDPEYRNGLNWTKA 545
Query: 495 SWNPANPHMLASASDDRTIRIWGL---KDLNVKRKDCHSNGVHYC 536
SW+P + +AS S D +I IW K + V K H+NG C
Sbjct: 546 SWSPDGRY-IASGSIDGSICIWDATNGKTVKVLTK-VHNNGSSVC 588
>UNIPROTKB|Q28BQ8 [details] [associations]
symbol:fbxw5 "F-box and WD-40 domain protein 5"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=ISS] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0051298 "centrosome duplication"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005737 GO:GO:0051298 Gene3D:2.130.10.10 SUPFAM:SSF50978
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0019005 GO:GO:0031146
GO:GO:0080008 HOVERGEN:HBG051595 EMBL:CR942694 UniGene:Str.11792
ProteinModelPortal:Q28BQ8 Uniprot:Q28BQ8
Length = 558
Score = 139 (54.0 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 423 EIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFG---GLEQAFIASGSEDSQVYIWHRASCD 479
E+ L+++ + + H R+ CF + F+ASG+ED Y+W R
Sbjct: 453 ELRLFDLRSLREAATPLRAH-RAYTPNNECFFIFLDVSTDFVASGAEDHCGYVWDRHYSA 511
Query: 480 LIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+ LP H VN V+++PAN +L SASDD TI++W
Sbjct: 512 CLAKLP-HDDVVNSVAFSPANQELLLSASDDFTIKVW 547
Score = 96 (38.9 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 29/93 (31%), Positives = 45/93 (48%)
Query: 207 SLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGV 266
S Y + Q D +P Q L+ H D+V + FSH+G AS S D + +W +
Sbjct: 68 SWYEEFQRVCDAVPRVEAQRLREHGDQVLHISFSHSGDLFASCSKDCTIKVWASA--PPI 125
Query: 267 TLKHK--LSGHQKPVSCVS-WSSDDQQLLTCGV 296
+++H + H + S ++SDD LL GV
Sbjct: 126 SVRHSADMKPHHWSYTQFSQFNSDDSLLLVSGV 158
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 182 (69.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 59/236 (25%), Positives = 115/236 (48%)
Query: 201 SSDRDMSLYTDHQCGRDQI-PSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
SS RD ++ D P + + L+GH+ V + SH+G++ S S D + +W
Sbjct: 39 SSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLW- 97
Query: 260 VDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYE--KA 317
D+ GV+ + GH + V V++SSD++Q+++ + ++ W+ + G C E +A
Sbjct: 98 -DITKGVSTR-LFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWN-TLGECKFTLEGPEA 154
Query: 318 GLGLVSC-GWHPDRKWIFSGANDKSICMWELGGKELEC--WKGQRTLKISDLEVTSDGKQ 374
VSC + P+ I SG+ D + +W++ K +C T ++ + ++ DG
Sbjct: 155 HQDWVSCIRFSPNTPTIVSGSWDNKVKIWDI--KSFKCNHTLTDHTGYVNTVTISPDGSL 212
Query: 375 IITMCKESALLLLDREAKVERY-IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
+ K++ L + + Y +E TI + + S NK+ L + +I +W++
Sbjct: 213 CASGGKDTFACLWELSSGKPLYKLEARNTINALAFS-PNKYWLSAATDDKIIIWDL 267
Score = 146 (56.5 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 54/201 (26%), Positives = 91/201 (45%)
Query: 327 HPDRKWIFSGANDKSICMWELGGKELEC-WKGQRTLK-----ISDLEVTSDGKQIITMCK 380
+PD I S + DK++ +W+L + K R+LK + D+ ++ DG+ ++
Sbjct: 33 NPDT--IISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSW 90
Query: 381 ESALLLLD--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAK 438
++ L L D + + Q + S + S DN+ ++ + I +WN GE K +
Sbjct: 91 DNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLE 150
Query: 439 Y-KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
+ H+ IR F I SGS D++V IW S L H+G VN V+ +
Sbjct: 151 GPEAHQDWVSCIR--FSP-NTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTIS 207
Query: 498 PANPHMLASASDDRTIRIWGL 518
P + + AS D +W L
Sbjct: 208 P-DGSLCASGGKDTFACLWEL 227
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S RD ++ + G + TL+ + H D V ++FS N + S S D IW++
Sbjct: 129 SGSRDATIKVWNTLGECKF---TLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDI 185
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG 320
H L+ H V+ V+ S D + G + W++SSG L+ E
Sbjct: 186 K---SFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT- 241
Query: 321 LVSCGWHPDRKWIFSGANDKSICMWELGGKEL 352
+ + + P++ W+ S A D I +W+L K++
Sbjct: 242 INALAFSPNKYWL-SAATDDKIIIWDLLTKQV 272
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 34/128 (26%), Positives = 58/128 (45%)
Query: 227 LQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV---DLNGGVTLKHKLSGHQKPVSCV 282
L GH V + S N + SSS D++ ++W++ D L GH V V
Sbjct: 17 LVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDV 76
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
S D Q L+ + +R WD++ G +++ ++S + D + I SG+ D +I
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATI 136
Query: 343 CMWELGGK 350
+W G+
Sbjct: 137 KVWNTLGE 144
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 408 LSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSED 467
+S D +F L + + LW+I V +KGH + V+ F + I SGS D
Sbjct: 78 ISHDGQFALSGSWDNTLRLWDITKGVS-TRLFKGHTQD--VMSVAFSS-DNRQIISGSRD 133
Query: 468 SQVYIWHR-ASCDLIGALP-GHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
+ + +W+ C P H V+C+ ++P P + S S D ++IW +K
Sbjct: 134 ATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTP-TIVSGSWDNKVKIWDIK 186
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 189 (71.6 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 538 KGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVTCTRFHPN 594
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ K++ SG+ D + +W++
Sbjct: 595 SNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI 654
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQT 402
G G + KG T I L+ + DG+ I + ++ + L D V R I++ +T
Sbjct: 655 GHGLMIAELKGH-TGTIYALKFSRDGEIIASGSIDNTVRLWD----VMRAIDDVET 705
Score = 175 (66.7 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 53/218 (24%), Positives = 99/218 (45%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ S +IL GH+ V+ + FS + YL SSS D + +W + T GH
Sbjct: 485 DEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQT---FTCLVGYKGHN 541
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 542 YPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVTCTRFHPNSNYVA 599
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G++D+++ +W+ L G + + G + I L + +GK + + + +LL D
Sbjct: 600 TGSSDRTVRLWDVLNGNCVRIFTGHKG-PIHSLAFSPNGKFLASGSTDGRVLLWDIGHGL 658
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
+ TI + SRD + + ++ + LW++
Sbjct: 659 MIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 160 (61.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 59/227 (25%), Positives = 97/227 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + + D I G D ++ +W + K+L K L + D E +
Sbjct: 418 CFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKE-S 476
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I K S+ E+K+ + S S D +LL + + I LW++
Sbjct: 477 DDVLERIMDEKTSS------ESKILH--GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSL 528
Query: 430 EGEVKLVAKYKGHKRSRFVIR-SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ LV YKGH + + S FG + SG D +W + GH
Sbjct: 529 QTFTCLVG-YKGHNYPVWDTQFSPFG----YYFVSGGHDRVARLWATDHYQPLRIFAGHL 583
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
V C ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 584 ADVTCTRFHP-NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIH 629
Score = 142 (55.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 50/205 (24%), Positives = 86/205 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV VS+S D LL+ + +R W + + CL Y+ + + P
Sbjct: 495 LHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGY 554
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-- 388
+ SG +D+ +W + L + G ++ + + T + + L D
Sbjct: 555 YFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVTCTRFHPNSNYVATGSSDRTVRLWDVL 613
Query: 389 REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV 448
V + I S + S + KFL + + LW+I G ++A+ KGH + +
Sbjct: 614 NGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI-GHGLMIAELKGHTGTIYA 672
Query: 449 IRSCFGGLEQAFIASGSEDSQVYIW 473
++ G IASGS D+ V +W
Sbjct: 673 LKFSRDG---EIIASGSIDNTVRLW 694
Score = 139 (54.0 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 47/215 (21%), Positives = 91/215 (42%)
Query: 306 SSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQR--TLKI 363
S LH + G+ + PDR ++ S + D +I +W L + C G + +
Sbjct: 490 SESKILHGHSGPVYGV---SFSPDRNYLLSSSEDGTIRLWSL--QTFTCLVGYKGHNYPV 544
Query: 364 SDLEVTSDGKQIITMCKE--SALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLN 421
D + + G ++ + + L D + + +T ++ ++ +
Sbjct: 545 WDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSD 604
Query: 422 QEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLI 481
+ + LW++ V + GHK I S F+ASGS D +V +W +I
Sbjct: 605 RTVRLWDVLNG-NCVRIFTGHKGP---IHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMI 660
Query: 482 GALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L GH+G + + ++ + ++AS S D T+R+W
Sbjct: 661 AELKGHTGTIYALKFS-RDGEIIASGSIDNTVRLW 694
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 33/105 (31%), Positives = 54/105 (51%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
SSDR + L+ D + ++I GH + L FS NGK+LAS S D ++W
Sbjct: 602 SSDRTVRLW-------DVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLW-- 652
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
D+ G+ + +L GH + + +S D + + + ++ VR WDV
Sbjct: 653 DIGHGLMIA-ELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 45 (20.9 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 286 SDDQQLLTCG-VEEAVRRWDVSSGNCLHVYEKAGLGLV 322
+DD L+ G + VR W V+ V A L L+
Sbjct: 435 TDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLI 472
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 186 (70.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 64/253 (25%), Positives = 114/253 (45%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GHTD + + F+ +G +ASSS D++ +W + G T+ H V V +S D
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTV---FKAHTASVRSVHFSRDG 114
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWEL 347
Q+L+T +++V+ W V L+ + V C + PD + I S +D+++ +W+
Sbjct: 115 QRLVTASDDKSVKVWGVERKKFLYSLNRH-TNWVRCARFSPDGRLIASCGDDRTVRLWDT 173
Query: 348 GGKE----LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAK-VERYIEEDQ 401
+ + G T ++ S G I + ++ + + D R K ++ Y +
Sbjct: 174 SSHQCINIFTDYGGSATF----VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNA 229
Query: 402 TITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
+ FS +L+ + I + ++ EG +L+ GHK V+ F F
Sbjct: 230 GVNCFSFHPSGNYLISGSSDSTIKILDLLEG--RLIYTLHGHKGP--VLTVTFSRDGDLF 285
Query: 461 IASGSEDSQVYIW 473
ASG DSQV +W
Sbjct: 286 -ASGGADSQVLMW 297
Score = 172 (65.6 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 45/205 (21%), Positives = 94/205 (45%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ + HT V + FS +G+ L ++S+D+S +W V+ + L+ H V C +S
Sbjct: 97 VFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERK---KFLYSLNRHTNWVRCARFS 153
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
D + + +CG + VR WD SS C++++ G ++ I S D +I +W
Sbjct: 154 PDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIW 213
Query: 346 ELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYIEEDQ-T 402
++ K ++ +K ++ G +I+ +S + +LD E ++ + +
Sbjct: 214 DIRTNKLIQHYKVHNA-GVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGP 272
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLW 427
+ + + SRD + ++ +W
Sbjct: 273 VLTVTFSRDGDLFASGGADSQVLMW 297
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 58/259 (22%), Positives = 115/259 (44%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG- 325
TL+ GH+ +SC ++ +++QL T ++++ W+++ + G V G
Sbjct: 9 TLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPK--ARAFRFVGHTDVITGV 66
Query: 326 -WHPDRKWIFSGANDKSICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESA 383
+ P + S + D+++ +W K E +K T + + + DG++++T + +
Sbjct: 67 NFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAH-TASVRSVHFSRDGQRLVTASDDKS 125
Query: 384 LLLLDREAKVERYIEEDQT--ITSFSLSRDNKFLLVNLLNQEIHLWNIEGE--VKLVAKY 439
+ + E K Y T + S D + + ++ + LW+ + + Y
Sbjct: 126 VKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 440 KGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPA 499
G + FV + G IAS D+ + IW + LI H+ VNC S++P+
Sbjct: 186 GGS--ATFVDFNSSG----TCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPS 239
Query: 500 NPHMLASASDDRTIRIWGL 518
+++ S S D TI+I L
Sbjct: 240 GNYLI-SGSSDSTIKILDL 257
Score = 156 (60.0 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 50/218 (22%), Positives = 100/218 (45%)
Query: 321 LVSCG-WHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMC 379
++SC ++P+ K + +G+ DKS+ +W L K T I+ + G + +
Sbjct: 20 VISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSS 79
Query: 380 KESALLLLDREAKVERYIEEDQT--ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
++ + L K E + + T + S SRD + L+ ++ + +W +E + L
Sbjct: 80 RDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFL-- 137
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
Y ++ + +V + F + IAS +D V +W +S I + G+ V +N
Sbjct: 138 -YSLNRHTNWVRCARFSP-DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFN 195
Query: 498 PANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
+ +AS+ D TI+IW ++ ++ H+ GV+
Sbjct: 196 SSGT-CIASSGADNTIKIWDIRTNKLIQHYKVHNAGVN 232
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 30/125 (24%), Positives = 63/125 (50%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L L HT+ V +FS +G+ +AS +DR+ +W+ + + + G + V
Sbjct: 137 LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGS---ATFVD 193
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDKSI 342
++S + + G + ++ WD+ + + Y+ G V+C +HP ++ SG++D +I
Sbjct: 194 FNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAG-VNCFSFHPSGNYLISGSSDSTI 252
Query: 343 CMWEL 347
+ +L
Sbjct: 253 KILDL 257
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 185 (70.2 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 67/258 (25%), Positives = 119/258 (46%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D V +QFS +G LAS+S DR+ +W D G + + H PV V +S+D
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADG 72
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLH-VYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWE 346
Q L T +++++ W + L+ +Y V C + PD + I S + DK+I +W+
Sbjct: 73 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWD 130
Query: 347 LGGKELECWKG-QRTLKISD-LEVTSDGKQIITMCKESALLLLD-REAKV-ERYIEEDQT 402
K+ C ++ ++ ++ G I + + + + D R K+ + Y
Sbjct: 131 TTNKQ--CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 188
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ S +L+ + + + ++ EG +L+ +GH F + GG + F
Sbjct: 189 VNCISFHPSGNYLITASSDGTLKILDLLEG--RLIYTLQGHTGPVFTVSFSKGG--ELF- 243
Query: 462 ASGSEDSQVYIWHRASCD 479
ASG D+QV +W R + D
Sbjct: 244 ASGGADTQVLLW-RTNFD 260
Score = 149 (57.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/204 (20%), Positives = 97/204 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+ HT V + FS +G++LA++S D+S +W + + L H V C +S D
Sbjct: 57 KAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ---RFLYSLYRHTHWVRCAKFSPD 113
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFSGANDKSICMWE 346
+ +++C ++ ++ WD ++ C++ + + +G + ++P I S +D+++ +W+
Sbjct: 114 GRLIVSCSEDKTIKIWDTTNKQCVNNFSDS-VGFANFVDFNPSGTCIASAGSDQTVKVWD 172
Query: 347 LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYIEEDQT--I 403
+ +L + ++ + G +IT + L +LD E ++ Y + T +
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLI-YTLQGHTGPV 231
Query: 404 TSFSLSRDNKFLLVNLLNQEIHLW 427
+ S S+ + + ++ LW
Sbjct: 232 FTVSFSKGGELFASGGADTQVLLW 255
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 391 AKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIR 450
A+ RY+ +TS S L ++ + LW + K +++K H +R
Sbjct: 9 ARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAP---VR 64
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
S + F+A+ SED + +W + +L H+ V C ++P + ++ S S+D
Sbjct: 65 SVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP-DGRLIVSCSED 123
Query: 511 RTIRIWGLKDLNVKRKDCHSN 531
+TI+IW + K C +N
Sbjct: 124 KTIKIW-----DTTNKQCVNN 139
Score = 127 (49.8 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 39/176 (22%), Positives = 81/176 (46%)
Query: 363 ISDLEVTSDGKQIITMCKESALLLL--DREAKVERYIEEDQTITSFSLSRDNKFLLVNLL 420
++ ++ + G + + ++ + L D+ K + + S S D +FL
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 421 NQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL 480
++ I +W++ + L + Y+ H + +V + F + I S SED + IW +
Sbjct: 81 DKSIKVWSMYRQRFLYSLYR-H--THWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQC 136
Query: 481 IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN--VKRKDCHSNGVH 534
+ G N V +NP+ +ASA D+T+++W ++ +N ++ HS GV+
Sbjct: 137 VNNFSDSVGFANFVDFNPSGT-CIASAGSDQTVKVWDVR-VNKLLQHYQVHSGGVN 190
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 154 (59.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 45/165 (27%), Positives = 78/165 (47%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GHT EV L +S +G+YLAS ND IW + H LS HQ V ++W
Sbjct: 308 GHTQEVCGLTWSPDGRYLASGGNDNMMYIWPMTTGSENQAIHALSEHQGAVKALAWCPWQ 367
Query: 289 QQLLTCG---VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSG---ANDKSI 342
+ G + +R W+ SSG+C+ + + S + P+ K + SG A+DK +
Sbjct: 368 PNIPASGGGTSDRHIRIWNASSGSCISSLDTCSQ-VSSLVFAPNYKELVSGHGFAHDK-V 425
Query: 343 CMWELGG-KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL 386
+W+ ++ +G +I +L ++ DG + ++ + + L
Sbjct: 426 VIWKYPSFAKVTEHEGHEA-RILNLALSPDGSTLASIAADETIRL 469
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 53/187 (28%), Positives = 85/187 (45%)
Query: 328 PDRK-WIFS--GANDKSICMWELGGKELECWKG-QRTLKISDLEVTSDGKQIITMCKESA 383
P++K W S G + + + LGGK L +G Q LK+ +V + K+S
Sbjct: 113 PNQKAWSMSLNGYDIEEAKILHLGGKPLYAPEGYQNNLKVLYSQVPTP-----VSVKKSR 167
Query: 384 LLLLDREAKVERY-IEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKG 441
+ E ++ I D + R N L V L NQ ++LW+ EG++ L+ K +
Sbjct: 168 YISSYPERILDAPDIRNDFYLNLMDWGRQN-VLAVGLANQ-VYLWDAGEGDIVLLKKMED 225
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
I S + F+A G+ D +V +W + ++ GHS V C+SWN
Sbjct: 226 DNE---YICSVSWSKDGNFLAIGTSDCKVELWDVQYQKRLRSMDGHSARVGCLSWND--- 279
Query: 502 HMLASAS 508
H+L+S S
Sbjct: 280 HILSSGS 286
Score = 124 (48.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 30/127 (23%), Positives = 60/127 (47%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L+ ++ + + + +S +G +LA ++D +W+V + + GH V C+S
Sbjct: 220 LKKMEDDNEYICSVSWSKDGNFLAIGTSDCKVELWDVQYQKRL---RSMDGHSARVGCLS 276
Query: 284 WSSDDQQLLTCGVEEA-VRRWDVSSGNCLHVYEKAGLGLVSCG--WHPDRKWIFSGANDK 340
W+ +L+ G + + DV + H++ G CG W PD +++ SG ND
Sbjct: 277 WND---HILSSGSRSGLIHQHDVRVADH-HIFTFGGHTQEVCGLTWSPDGRYLASGGNDN 332
Query: 341 SICMWEL 347
+ +W +
Sbjct: 333 MMYIWPM 339
Score = 110 (43.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 460 FIASGSEDSQVYIWHRASCD---LIGALPGHSGAVNCVSWNPANPHMLASA--SDDRTIR 514
++ASG D+ +YIW + I AL H GAV ++W P P++ AS + DR IR
Sbjct: 324 YLASGGNDNMMYIWPMTTGSENQAIHALSEHQGAVKALAWCPWQPNIPASGGGTSDRHIR 383
Query: 515 IW 516
IW
Sbjct: 384 IW 385
Score = 62 (26.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 464 GSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGL--KDL 521
G +V IW S + GH + ++ +P + LAS + D TIR+W K+
Sbjct: 419 GFAHDKVVIWKYPSFAKVTEHEGHEARILNLALSP-DGSTLASIAADETIRLWKCFEKEK 477
Query: 522 NVKRKDCHSNG 532
+ +K ++G
Sbjct: 478 DAAKKPKQASG 488
Score = 62 (26.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEA-VRRWDV 305
+W+ G + L K+ + + VSWS D L G + V WDV
Sbjct: 209 LWDAG-EGDIVLLKKMEDDNEYICSVSWSKDGN-FLAIGTSDCKVELWDV 256
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 189 (71.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 49/179 (27%), Positives = 85/179 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 562 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVTCTRFHPN 618
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 619 SNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI 678
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
G G + KG T I L + DG+ + + ++ + L D K +E D T+
Sbjct: 679 GHGLMVGELKGH-TDTIYALRFSRDGEILASGSMDNTVRLWDA-VKAFEDLETDDFTTA 735
Score = 171 (65.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 55/217 (25%), Positives = 96/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL S S D + +W + T GH
Sbjct: 509 DEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQT---FTCLVGYKGHN 565
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ +I
Sbjct: 566 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVTCTRFHPNSNYIA 623
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 624 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLAFSPNGRFLATGATDGRVLLWDIGHGL 682
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V TI + SRD + L ++ + LW+
Sbjct: 683 MVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 151 (58.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 58/226 (25%), Positives = 95/226 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + D I G D ++ +W + K+L K L + D E +
Sbjct: 442 CFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSLIDKE-S 500
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I M +++A E K+ + S S D +LL + + LW++
Sbjct: 501 DDVLERI-MDEKTA-----SELKI--LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSL 552
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ LV YKGH V + F F+ SG D +W + GH
Sbjct: 553 QTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHLA 608
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
V C ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 609 DVTCTRFHP-NSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 653
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 51/205 (24%), Positives = 85/205 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+C + VR W + + CL Y+ + + P
Sbjct: 519 LYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 578
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-- 388
+ SG +D+ +W + L + G ++ + I T + + L D
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVTCTRFHPNSNYIATGSADRTVRLWDVL 637
Query: 389 REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV 448
V + I S + S + +FL + + LW+I G +V + KGH + +
Sbjct: 638 NGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDTIYA 696
Query: 449 IRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 697 LRFSRDG---EILASGSMDNTVRLW 718
Score = 129 (50.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 40/193 (20%), Positives = 84/193 (43%)
Query: 328 PDRKWIFSGANDKSICMWELGGKELECWKGQR--TLKISDLEVTSDGKQIITMCKE--SA 383
PDR ++ S + D ++ +W L + C G + + D + + G ++ + +
Sbjct: 533 PDRNYLLSCSEDGTVRLWSL--QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVAR 590
Query: 384 LLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
L D + + +T ++ ++ ++ + LW++ V + GHK
Sbjct: 591 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNG-NCVRIFTGHK 649
Query: 444 RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHM 503
I S F+A+G+ D +V +W ++G L GH+ + + ++ + +
Sbjct: 650 GP---IHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS-RDGEI 705
Query: 504 LASASDDRTIRIW 516
LAS S D T+R+W
Sbjct: 706 LASGSMDNTVRLW 718
Score = 42 (19.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 286 SDDQQLLTCG-VEEAVRRWDVSSGNCLHVYEKAGLGLV 322
+DD ++ G + VR W V+ V A L L+
Sbjct: 459 TDDSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSLI 496
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 182 (69.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 82/336 (24%), Positives = 136/336 (40%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S D ++ ++ D+ ++T+ + GHT + L +S G YLAS+S D + +W+
Sbjct: 31 SCGEDKTIRVWNKSDTDRWVAQTV-LTDGHTRTIRELAWSCCGHYLASASFDTTVAVWDK 89
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSG-------NCLHV 313
+G L GH V V+WS L TC +++V W++ C+ V
Sbjct: 90 K-SGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECVAV 148
Query: 314 YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGK 373
+ WHP + S + D +I M+ + E W+ + LE S
Sbjct: 149 LNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDLADSE-WE-----MLEPLESHSS-- 200
Query: 374 QIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV 433
T+ S D + ED T+ + + L + ++ +W
Sbjct: 201 ---TVWSIS----FDATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRGT-IW------ 246
Query: 434 KLVAKYKG-HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRAS--------CDLIGAL 484
K V G H RS + I C + +A+ D V I+ AS +L+ +
Sbjct: 247 KCVCTLSGYHSRSVYDIDWC---KQTGLLATACGDDTVRIFREASDSDRNEPTFELVVTV 303
Query: 485 PGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
HS N V+W+P P +L +ASDD I++W D
Sbjct: 304 EAHSQDANKVAWHPTVPGLLLTASDDGEIKLWQYVD 339
Score = 133 (51.9 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 34/127 (26%), Positives = 53/127 (41%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIW-EVDLNGGVTLKHKLSGHQKPVSCV 282
LQ L GH VW + GK AS D++ +W + D + V GH + + +
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIREL 66
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDK 340
+WS L + + V WD SG C E + S W + + + DK
Sbjct: 67 AWSCCGHYLASASFDTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDK 126
Query: 341 SICMWEL 347
S+ +WE+
Sbjct: 127 SVWIWEI 133
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 189 (71.6 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRFHPN 638
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 639 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
G G + KG T + L + DG+ + + ++ + L D K +E D T+
Sbjct: 699 GHGLMVGELKGH-TDTVCSLRFSRDGEILASGSMDNTVRLWDA-VKAFEDVETDDFTTA 755
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL SSS D + +W + T GH
Sbjct: 529 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHN 585
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVNCTRFHPNSNYVA 643
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 644 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V T+ S SRD + L ++ + LW+
Sbjct: 703 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/226 (26%), Positives = 97/226 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + D I G D ++ +W + K+L K L + D E +
Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKE-S 520
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I M +++A E K+ + S S D +LL + + + LW++
Sbjct: 521 DDVLERI-MDEKTA-----SELKI--LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ LV YKGH V + F F+ SG D +W + GH
Sbjct: 573 QTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHLA 628
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
VNC ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 629 DVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 673
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+ + VR W + + CL Y+ + + P
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTS---DGKQIITMCKESALLLL 387
+ SG +D+ +W + L + G ++D+ T + + T + + L
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGH----LADVNCTRFHPNSNYVATGSADRTVRLW 654
Query: 388 D--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D V + I S + S + +FL + + LW+I G +V + KGH +
Sbjct: 655 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDT 713
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 714 VCSLRFSRDG---EILASGSMDNTVRLW 738
Score = 126 (49.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 42/208 (20%), Positives = 89/208 (42%)
Query: 313 VYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQR--TLKISDLEVTS 370
+Y +G + + PDR ++ S + D ++ +W L + C G + + D + +
Sbjct: 539 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSL--QTFTCLVGYKGHNYPVWDTQFSP 595
Query: 371 DGKQIITMCKE--SALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
G ++ + + L D + + + ++ ++ ++ + LW+
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655
Query: 429 IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ V + GHK I S F+A+G+ D +V +W ++G L GH+
Sbjct: 656 VLNG-NCVRIFTGHKGP---IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIW 516
V + ++ + +LAS S D T+R+W
Sbjct: 712 DTVCSLRFS-RDGEILASGSMDNTVRLW 738
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 286 SDDQQLLTCG-VEEAVRRWDVSSGNCLHVYEKAGLGLV 322
+DD L+ G + VR W V+ V + A L L+
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLI 516
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 185 (70.2 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 67/258 (25%), Positives = 120/258 (46%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D V +QFS +G LAS+S DR+ +W D G + + H PV V +S+D
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADG 114
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLH-VYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWE 346
Q L T +++++ W + L+ +Y V C + PD + I S + DK+I +W+
Sbjct: 115 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 347 LGGKELECWKG-QRTLKISD-LEVTSDGKQIITMCKESALLLLD-REAKV-ERYIEEDQT 402
K+ C ++ ++ ++ G I + + + + D R K+ + Y
Sbjct: 173 TTNKQ--CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ S + +L+ + + + ++ EG +L+ +GH F + GG + F
Sbjct: 231 VNCISFHPSDNYLVTASSDGTLKILDLLEG--RLIYTLQGHTGPVFTVSFSKGG--ELF- 285
Query: 462 ASGSEDSQVYIWHRASCD 479
ASG D+QV +W R + D
Sbjct: 286 ASGGADTQVLLW-RTNFD 302
Score = 151 (58.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 59/291 (20%), Positives = 118/291 (40%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH + L S NGK LA++S D ++W + ++ GH+ V+ V +S
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARA---YRYVGHKDVVTSVQFSPH 71
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L + + VR W ++ + S + D +++ + + DKSI +W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITS 405
+ + T + + + DG+ I++ ++ + + D K V + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ + +Q + +W++ KL+ Y+ H I F + ++ + S
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVN-KLLQHYQVHSGGVNCIS--FHPSDN-YLVTAS 247
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
D + I LI L GH+G V VS++ + AS D + +W
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG-ELFASGGADTQVLLW 297
Score = 137 (53.3 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 53/256 (20%), Positives = 113/256 (44%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
L+ GH+ ++ + S + +QL T + + W+ + Y + S +
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 328 PDRKWIFSGANDKSICMW--ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALL 385
P + S + D+++ +W + GK E +K T + ++ ++DG+ + T ++ ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSE-FKAH-TAPVRSVDFSADGQFLATASEDKSIK 127
Query: 386 L--LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
+ + R+ + + S D + ++ ++ I +W+ + + V +
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSV 186
Query: 444 R-SRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
+ FV + G IAS D V +W L+ HSG VNC+S++P++ +
Sbjct: 187 GFANFVDFNPSG----TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNY 242
Query: 503 MLASASDDRTIRIWGL 518
L +AS D T++I L
Sbjct: 243 -LVTASSDGTLKILDL 257
Score = 131 (51.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/219 (20%), Positives = 97/219 (44%)
Query: 321 LVSCGWHPDRKWIFSGANDKSICMWELGGKELEC-WKGQRTLKISDLEVTSDGKQIITMC 379
+ S P+ K + + + D + +W + G + + ++ ++ + G + +
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQFSPHGNLLASAS 79
Query: 380 KESALLLL--DREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
++ + L D+ K + + S S D +FL ++ I +W++ + L +
Sbjct: 80 RDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYS 139
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
Y+ H + +V + F + I S SED + IW + + G N V +N
Sbjct: 140 LYR-H--THWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN 195
Query: 498 PANPHMLASASDDRTIRIWGLKDLN--VKRKDCHSNGVH 534
P+ +ASA D+T+++W ++ +N ++ HS GV+
Sbjct: 196 PSGT-CIASAGSDQTVKVWDVR-VNKLLQHYQVHSGGVN 232
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 32/129 (24%), Positives = 62/129 (48%)
Query: 236 FLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCG 295
F+ F+ +G +AS+ +D++ +W+V +N L+H H V+C+S+ D L+T
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVWDVRVNK--LLQH-YQVHSGGVNCISFHPSDNYLVTAS 247
Query: 296 VEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECW 355
+ ++ D+ G ++ + + + + + SG D + +W EL C
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNFDELHC- 306
Query: 356 KG--QRTLK 362
KG +R LK
Sbjct: 307 KGLNKRNLK 315
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 189 (71.6 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRYHPN 639
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 640 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
G G + KG T + L + DG+ + + ++ + L D K +E D T+
Sbjct: 700 GHGLMVGELKGH-TDTVCSLRFSRDGEILASGSMDNTVRLWDA-VKAFEDLETDDFTTA 756
Score = 179 (68.1 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL SSS D + +W + T GH
Sbjct: 530 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHN 586
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVNCTRYHPNSNYVA 644
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 645 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V T+ S SRD + L ++ + LW+
Sbjct: 704 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 157 (60.3 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 59/226 (26%), Positives = 97/226 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + D I G D ++ +W + K+L K L + D E +
Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKE-S 521
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I M +++A E K+ + S S D +LL + + + LW++
Sbjct: 522 DDVLERI-MDEKTA-----SELKI--LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ LV YKGH V + F F+ SG D +W + GH
Sbjct: 574 QTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHLA 629
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
VNC ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 630 DVNCTRYHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 674
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+ + VR W + + CL Y+ + + P
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTS---DGKQIITMCKESALLLL 387
+ SG +D+ +W + L + G ++D+ T + + T + + L
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGH----LADVNCTRYHPNSNYVATGSADRTVRLW 655
Query: 388 D--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D V + I S + S + +FL + + LW+I G +V + KGH +
Sbjct: 656 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDT 714
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 715 VCSLRFSRDG---EILASGSMDNTVRLW 739
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 47/237 (19%), Positives = 101/237 (42%)
Query: 286 SDDQQLLTCGVEEAVRR-WDVSSGNCLHV-YEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
+ D L+ ++ + R D + + L + Y +G + + PDR ++ S + D ++
Sbjct: 511 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSG-PVYGASFSPDRNYLLSSSEDGTVR 569
Query: 344 MWELGGKELECWKGQR--TLKISDLEVTSDGKQIITMCKE--SALLLLDREAKVERYIEE 399
+W L + C G + + D + + G ++ + + L D + +
Sbjct: 570 LWSL--QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 627
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
+ ++ ++ ++ + LW++ V + GHK I S
Sbjct: 628 LADVNCTRYHPNSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP---IHSLTFSPNGR 683
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
F+A+G+ D +V +W ++G L GH+ V + ++ + +LAS S D T+R+W
Sbjct: 684 FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 739
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 69/291 (23%), Positives = 134/291 (46%)
Query: 221 SRTLQILQGHTD-EVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPV 279
SRT+Q H+D +V L+ +++ K LA++ + ++ ++++ + GH+ V
Sbjct: 25 SRTIQ----HSDSQVNRLEITNDKKLLATAGH-QNVRLYDIRTTNPNPVA-SFEGHRGNV 78
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYE-KAGLGLVSCGWHPDRKWIFSGAN 338
+ VS+ D++ ++T + ++ WDV S + Y+ A + V HP++ + S
Sbjct: 79 TSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVI--HPNQGELISCDR 136
Query: 339 DKSICMWELGGKELECWKG---QRTLKISDLEVTSDGKQIITMCKESALLLLDR----EA 391
D +I +W+LG E +C + + L + SDG + + + + +A
Sbjct: 137 DGNIRIWDLG--ENQCTHQLTPEDDTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDA 194
Query: 392 K----VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
V ++ IT LS D K L + +W+I+ + KL GH+R
Sbjct: 195 SHLKPVTKFRAHSTYITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQRW-- 252
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH-SGAVNCVSWN 497
+ C + A++ + S D V +W ++ +++ GH GAV CV+ N
Sbjct: 253 -VWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQYGGHHKGAV-CVALN 301
Score = 142 (55.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 63/295 (21%), Positives = 128/295 (43%)
Query: 246 LASSSNDRSAIIWEVDLNG--GVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW 303
L S+ D + WE L G T++H S Q V+ + ++D + L T G + VR +
Sbjct: 5 LVSAGYDHTIRFWEA-LTGVCSRTIQH--SDSQ--VNRLEITNDKKLLATAG-HQNVRLY 58
Query: 304 DVSSGNCLHV--YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTL 361
D+ + N V +E + S + D +W+ + + D +I +W++ + +
Sbjct: 59 DIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPR-NYKHNA 117
Query: 362 KISDLEVTSDGKQIITMCKESALLLLDR-EAKVERYI--EEDQTITSFSLSRDNKFLLVN 418
++++ + + ++I+ ++ + + D E + + E+D ++ S S++ D L
Sbjct: 118 PVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPEDDTSLQSLSMASDGSMLAAA 177
Query: 419 LLNQEIHLWNIEGE-----VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
++W + +K V K++ H S ++ R + +A+ S D +W
Sbjct: 178 NTKGNCYVWEMPNHTDASHLKPVTKFRAH--STYITRILLSS-DVKHLATCSADHTARVW 234
Query: 474 H-RASCDLIGALPGHSGAV-NCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRK 526
L L GH V +C A+ L +AS D +R+W L + R+
Sbjct: 235 SIDDDFKLETTLDGHQRWVWDCAF--SADSAYLVTASSDHYVRLWDLSTREIVRQ 287
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 186 (70.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 47/176 (26%), Positives = 84/176 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 342 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRFHPN 398
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 399 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 458
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQT 402
G G + KG T + L + DG+ + + ++ + L D K +E D +
Sbjct: 459 GHGLMVGELKGH-TDTVCSLRFSRDGEILASGSMDNTVRLWDA-VKAFEDLETDNS 512
Score = 178 (67.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL SSS D + +W + T GH
Sbjct: 289 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHN 345
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 346 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVNCTRFHPNSNYVA 403
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 404 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 462
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V T+ S SRD + L ++ + LW+
Sbjct: 463 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 148 (57.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 59/227 (25%), Positives = 95/227 (41%)
Query: 310 CLHVYEKA-GLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEV 368
C + + A GL + D I G D ++ +W + K+L K L + D E
Sbjct: 221 CFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKE- 279
Query: 369 TSDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
SD M +++A E K+ + S S D +LL + + + LW+
Sbjct: 280 -SDDVLERIMDEKTA-----SELKI--LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 331
Query: 429 IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
++ LV YKGH V + F F+ SG D +W + GH
Sbjct: 332 LQTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHL 387
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
VNC ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 388 ADVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 433
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+ + VR W + + CL Y+ + + P
Sbjct: 299 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 358
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTS---DGKQIITMCKESALLLL 387
+ SG +D+ +W + L + G ++D+ T + + T + + L
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGH----LADVNCTRFHPNSNYVATGSADRTVRLW 414
Query: 388 D--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D V + I S + S + +FL + + LW+I G +V + KGH +
Sbjct: 415 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDT 473
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 474 VCSLRFSRDG---EILASGSMDNTVRLW 498
Score = 126 (49.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 42/208 (20%), Positives = 89/208 (42%)
Query: 313 VYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQR--TLKISDLEVTS 370
+Y +G + + PDR ++ S + D ++ +W L + C G + + D + +
Sbjct: 299 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSL--QTFTCLVGYKGHNYPVWDTQFSP 355
Query: 371 DGKQIITMCKE--SALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
G ++ + + L D + + + ++ ++ ++ + LW+
Sbjct: 356 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 415
Query: 429 IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ V + GHK I S F+A+G+ D +V +W ++G L GH+
Sbjct: 416 VLNG-NCVRIFTGHKGP---IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 471
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIW 516
V + ++ + +LAS S D T+R+W
Sbjct: 472 DTVCSLRFS-RDGEILASGSMDNTVRLW 498
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCG-VEEAVRRWDVSSGNCLHVYEKAGLGLV 322
L+ +Q+ ++ V +DD L+ G + VR W V+ V + A L L+
Sbjct: 226 LNAYQQGLTAVD-VTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLI 276
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 158 (60.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 41/165 (24%), Positives = 77/165 (46%)
Query: 197 MFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
+ + DR + L+ +C DQ+ + + + H + + +S G Y+AS+S D +
Sbjct: 29 LISSGEDRVIKLWA--KCN-DQLWGSSFSLPEAHKKSIRCVTWSPCGTYIASASFDGTVT 85
Query: 257 IWEV-DLNGGVTLKH--KLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW---DVSSGNC 310
IW++ + + ++ L GH V CV+W + TCG +++V W D C
Sbjct: 86 IWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDVQC 145
Query: 311 LHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECW 355
+ V + + S WHP + + S + D I ++ +EL+ W
Sbjct: 146 VSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYR---EELDDW 187
Score = 132 (51.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 37/142 (26%), Positives = 59/142 (41%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV--DLNGGVTLKHKLSGHQKPV 279
R +Q L+ +W L ++H G L SS DR +W D G + H+K +
Sbjct: 5 REVQKLKASNKRLWSLSWNHKGSVLISSGEDRVIKLWAKCNDQLWGSSFSLP-EAHKKSI 63
Query: 280 SCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYE-----KAGLGLVSC-GWHPDRKWI 333
CV+WS + + + V W +S + E + V C W P I
Sbjct: 64 RCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLI 123
Query: 334 FSGANDKSICMWELGGKE-LEC 354
+ DKS+ +WE +E ++C
Sbjct: 124 ATCGRDKSVWLWEFDDEEDVQC 145
Score = 105 (42.0 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 27/92 (29%), Positives = 44/92 (47%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHK----LSG-HQKPVSC 281
L GH VW +FS +G LAS S+D +W + G + LSG H + +
Sbjct: 193 LSGHDSTVWKAEFSPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFD 252
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHV 313
++WS D Q L +CG + + + + + H+
Sbjct: 253 LNWSPDSQLLASCGSDNRLCIYKMPANGLTHI 284
Score = 101 (40.6 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + + +LQ H+ +V + + +G+ L S+S D ++ +L+ T+ +LSGH
Sbjct: 139 DEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDW-TVFAQLSGHD 197
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWD-------VSSGNCLHVYEKAGLGLV-SCGWHP 328
V +S L +C + V+ W SS C+ + W P
Sbjct: 198 STVWKAEFSPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSP 257
Query: 329 DRKWIFSGANDKSICMWEL 347
D + + S +D +C++++
Sbjct: 258 DSQLLASCGSDNRLCIYKM 276
Score = 95 (38.5 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 38/165 (23%), Positives = 66/165 (40%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GHT EV + + +G +A+ D+S +WE D V L H + V V+W
Sbjct: 104 LEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHP 163
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH----PDRKWIFSGANDKSI 342
+ L++ + + + + V+ + G S W P + S ++D +
Sbjct: 164 HGEVLVSTSYDNKINVYREELDDWT-VFAQLS-GHDSTVWKAEFSPSGDILASCSDDLCV 221
Query: 343 CMWELGGK--ELECW------KGQRTLKISDLEVTSDGKQIITMC 379
+W G + W G T I DL + D Q++ C
Sbjct: 222 KLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSPDS-QLLASC 265
Score = 76 (31.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 421 NQEIHLWNIEGE--VKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASC 478
++ + LW + E V+ V+ + H + ++S + S S D+++ ++
Sbjct: 129 DKSVWLWEFDDEEDVQCVSVLQPHSQD---VKSVAWHPHGEVLVSTSYDNKINVYREELD 185
Query: 479 D--LIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
D + L GH V ++P+ +LAS SDD +++W
Sbjct: 186 DWTVFAQLSGHDSTVWKAEFSPSGD-ILASCSDDLCVKLW 224
Score = 67 (28.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 480 LIGALPG-HSGAVNCVSWNP------------ANPHM-LASASDDRTIRIWGLK 519
L G +P HS VNCV W P +N H+ L +ASDD I+ W ++
Sbjct: 296 LWGHVPNAHSEDVNCVRWKPGNITDISHSESISNCHLFLTTASDDGYIKFWSIE 349
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 407 SLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSE 466
S S DNK +N+ +E+ W + A+ GH + V ++ F +AS S+
Sbjct: 170 STSYDNK---INVYREELDDWTV------FAQLSGHDST--VWKAEFSPSGD-ILASCSD 217
Query: 467 DSQVYIWH-RASCD------LIGALPG-HSGAVNCVSWNPANPHMLASASDDRTIRIW 516
D V +W C I L G H+ + ++W+P + +LAS D + I+
Sbjct: 218 DLCVKLWSWEGVCGKSSSWMCIATLSGYHTRTIFDLNWSP-DSQLLASCGSDNRLCIY 274
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 67/258 (25%), Positives = 119/258 (46%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D V +QFS +G LAS+S DR+ +W D G + + H PV V +S+D
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS---EFKAHTAPVRSVDFSADG 114
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLH-VYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWE 346
Q L T +++++ W + L+ +Y V C + PD + I S + DK+I +W+
Sbjct: 115 QFLATASEDKSIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVSCSEDKTIKIWD 172
Query: 347 LGGKELECWKG-QRTLKISD-LEVTSDGKQIITMCKESALLLLD-REAKV-ERYIEEDQT 402
K+ C ++ ++ ++ G I + + + + D R K+ + Y
Sbjct: 173 TTNKQ--CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG 230
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ S +L+ + + + ++ EG +L+ +GH F + GG + F
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEG--RLIYTLQGHTGPVFTVSFSKGG--ELF- 285
Query: 462 ASGSEDSQVYIWHRASCD 479
ASG D+QV +W R + D
Sbjct: 286 ASGGADTQVLLW-RTNFD 302
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 59/291 (20%), Positives = 117/291 (40%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH + L S NGK LA++S D ++W + ++ GH+ V+ V +S
Sbjct: 15 KGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARA---YRYVGHKDVVTSVQFSPH 71
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L + + VR W ++ + S + D +++ + + DKSI +W +
Sbjct: 72 GNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSM 131
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITS 405
+ + T + + + DG+ I++ ++ + + D K V + +
Sbjct: 132 YRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF 191
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ + +Q + +W++ KL+ Y+ H I G ++ + S
Sbjct: 192 VDFNPSGTCIASAGSDQTVKVWDVRVN-KLLQHYQVHSGGVNCISFHPSG---NYLITAS 247
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
D + I LI L GH+G V VS++ + AS D + +W
Sbjct: 248 SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGG-ELFASGGADTQVLLW 297
Score = 136 (52.9 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 52/256 (20%), Positives = 113/256 (44%)
Query: 268 LKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWH 327
L+ GH+ ++ + S + +QL T + + W+ + Y + S +
Sbjct: 10 LERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 328 PDRKWIFSGANDKSICMW--ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALL 385
P + S + D+++ +W + GK E +K T + ++ ++DG+ + T ++ ++
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSE-FKAH-TAPVRSVDFSADGQFLATASEDKSIK 127
Query: 386 L--LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
+ + R+ + + S D + ++ ++ I +W+ + + V +
Sbjct: 128 VWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-QCVNNFSDSV 186
Query: 444 R-SRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
+ FV + G IAS D V +W L+ HSG VNC+S++P+ +
Sbjct: 187 GFANFVDFNPSG----TCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNY 242
Query: 503 MLASASDDRTIRIWGL 518
++ +AS D T++I L
Sbjct: 243 LI-TASSDGTLKILDL 257
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/219 (20%), Positives = 97/219 (44%)
Query: 321 LVSCGWHPDRKWIFSGANDKSICMWELGGKELEC-WKGQRTLKISDLEVTSDGKQIITMC 379
+ S P+ K + + + D + +W + G + + ++ ++ + G + +
Sbjct: 21 ITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDV-VTSVQFSPHGNLLASAS 79
Query: 380 KESALLLL--DREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVA 437
++ + L D+ K + + S S D +FL ++ I +W++ + L +
Sbjct: 80 RDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYS 139
Query: 438 KYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWN 497
Y+ H + +V + F + I S SED + IW + + G N V +N
Sbjct: 140 LYR-H--THWVRCAKFSP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFN 195
Query: 498 PANPHMLASASDDRTIRIWGLKDLN--VKRKDCHSNGVH 534
P+ +ASA D+T+++W ++ +N ++ HS GV+
Sbjct: 196 PSGT-CIASAGSDQTVKVWDVR-VNKLLQHYQVHSGGVN 232
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 56/198 (28%), Positives = 91/198 (45%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKH--KLSGHQKPVSC 281
+Q L+GH V + +S G++LA +S D S IWE + + H L GH V
Sbjct: 62 VQSLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDE-LEFTHVSSLEGHTYEVKS 120
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
V+W S L TC ++++ W + N CL + G + WHP+ + + S +
Sbjct: 121 VAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSY 180
Query: 339 DKSICMW-ELGGKELECWK---GQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVE 394
D +I W ++ G + EC G + I DL DG ++++ C E L+L + K
Sbjct: 181 DDTIKFWKDIDG-DWECINTLTGHES-SIWDLAFNKDGDKLVS-CGEDKLVLFWKFDK-- 235
Query: 395 RYIEEDQTITSFSLSRDN 412
E ++ I F +N
Sbjct: 236 ---ENEKWINIFKFKNEN 250
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 40/184 (21%), Positives = 85/184 (46%)
Query: 216 RDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGH 275
+D++ + L+GHT EV + + G LA+ S D+S IW+++ + SGH
Sbjct: 100 KDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGH 159
Query: 276 QKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWI 333
+ + CV W +++ L + ++ ++ W G+ C++ + ++ D +
Sbjct: 160 GQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKL 219
Query: 334 FSGANDKSICMWELGGKELECW------KGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
S DK + W+ KE E W K + + I ++ +S I+T + +++
Sbjct: 220 VSCGEDKLVLFWKFD-KENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFY 278
Query: 388 DREA 391
++E+
Sbjct: 279 EQES 282
Score = 151 (58.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 232 DEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQL 291
D+VW L + NG+ LA+ +ND+ IW D NG L L GH+K V V+WS + L
Sbjct: 25 DKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFL 84
Query: 292 LTCGVEEAVRRWDVSSGNC--LHVYEKAG--LGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ + W+ S HV G + S W + + + DKSI +W++
Sbjct: 85 AGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQM 144
Query: 348 -GGKELEC 354
+ EC
Sbjct: 145 EDDNDFEC 152
Score = 116 (45.9 bits), Expect = 0.00070, P = 0.00070
Identities = 36/119 (30%), Positives = 62/119 (52%)
Query: 412 NKFLLVNLLNQE-IHLWNIE--GEVKLVAKYKGHKRS-RFVIRSCFGGLEQAFIASGSED 467
N +L N + I +W+ + G+ LV +GH+++ R V S G F+A S D
Sbjct: 35 NGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCG----RFLAGASFD 90
Query: 468 SQVYIWHRASCDL----IGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLN 522
+ IW ++ +L + +L GH+ V V+W+ +LA+ S D++I IW ++D N
Sbjct: 91 ASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGT-LLATCSRDKSIWIWQMEDDN 148
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 181 (68.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 85/311 (27%), Positives = 125/311 (40%)
Query: 223 TLQILQ-GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
T IL GH + +Q+S G+YLAS+S D + IW +G L GH+ V
Sbjct: 50 TKTILSDGHKRTIREIQWSPCGQYLASASFDATTAIWSKS-SGEFECNATLEGHENEVKS 108
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGAN 338
VSWS L TC +++V W+V+ + C V + WHP ++ + S +
Sbjct: 109 VSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTKEILASASY 168
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIE 398
D +I M+ + + W TL TS S + +D +A ER +
Sbjct: 169 DNTIKMYAEEPIDND-WDCTATL-------TSH---------TSTIWGIDFDADGERLVS 211
Query: 399 --EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG-HKRSRFVIRSC-FG 454
+D T+ + V +Q+ +W K V G H R+ + + C
Sbjct: 212 CSDDTTVKIWRAYHPGNSAGVATPDQQT-VW------KCVCTLSGQHSRAIYDVSWCKLT 264
Query: 455 GLEQAFIASGSEDSQVYIWHRASCD---------LIGALPGHSGAVNCVSWNPANPHMLA 505
GL IA+ D + I+ S L H VN V WNP L
Sbjct: 265 GL----IATACGDDGIRIFKETSDSKPDEPTFEQLTAEESAHDQDVNSVQWNPVVAGQLI 320
Query: 506 SASDDRTIRIW 516
S SDD TI+IW
Sbjct: 321 SCSDDGTIKIW 331
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 36/131 (27%), Positives = 55/131 (41%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
LQGH +W + + G AS D++ IW + N T GH++ + + WS
Sbjct: 10 LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSP 69
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
Q L + + W SSG C E + S W + + + DKS+ +
Sbjct: 70 CGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWI 129
Query: 345 WELGGK-ELEC 354
WE+ G E EC
Sbjct: 130 WEVAGDDEFEC 140
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 188 (71.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRFHPN 639
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 640 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 699
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
G G + KG T + L + DG+ + + ++ + L D K +E D T+
Sbjct: 700 GHGLMVGELKGH-TDTVCSLRFSRDGEILASGSMDNTVRLWDA-VKAFEDLETDDFTTA 756
Score = 178 (67.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL SSS D + +W + T GH
Sbjct: 530 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHN 586
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVNCTRFHPNSNYVA 644
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 645 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 703
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V T+ S SRD + L ++ + LW+
Sbjct: 704 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/226 (26%), Positives = 97/226 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + D I G D ++ +W + K+L K L + D E +
Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKE-S 521
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I M +++A E K+ + S S D +LL + + + LW++
Sbjct: 522 DDVLERI-MDEKTA-----SELKI--LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ LV YKGH V + F F+ SG D +W + GH
Sbjct: 574 QTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHLA 629
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
VNC ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 630 DVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 674
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+ + VR W + + CL Y+ + + P
Sbjct: 540 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 599
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTS---DGKQIITMCKESALLLL 387
+ SG +D+ +W + L + G ++D+ T + + T + + L
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGH----LADVNCTRFHPNSNYVATGSADRTVRLW 655
Query: 388 D--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D V + I S + S + +FL + + LW+I G +V + KGH +
Sbjct: 656 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDT 714
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 715 VCSLRFSRDG---EILASGSMDNTVRLW 739
Score = 126 (49.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 42/208 (20%), Positives = 89/208 (42%)
Query: 313 VYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQR--TLKISDLEVTS 370
+Y +G + + PDR ++ S + D ++ +W L + C G + + D + +
Sbjct: 540 LYGHSG-PVYGASFSPDRNYLLSSSEDGTVRLWSL--QTFTCLVGYKGHNYPVWDTQFSP 596
Query: 371 DGKQIITMCKE--SALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
G ++ + + L D + + + ++ ++ ++ + LW+
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 656
Query: 429 IEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ V + GHK I S F+A+G+ D +V +W ++G L GH+
Sbjct: 657 VLNG-NCVRIFTGHKGP---IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIW 516
V + ++ + +LAS S D T+R+W
Sbjct: 713 DTVCSLRFS-RDGEILASGSMDNTVRLW 739
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 286 SDDQQLLTCG-VEEAVRRWDVSSGNCLHVYEKAGLGLV 322
+DD L+ G + VR W V+ V + A L L+
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLI 517
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 148 (57.2 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 40/147 (27%), Positives = 69/147 (46%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
L L GHT V + F +G++LAS+S D S +W+V+ + L+ GH + V VS
Sbjct: 294 LATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQE---GHSRGVFAVS 350
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLG----LVSCGWHPDRKWIFSGAND 339
++ D L + G + R WD+ +G + + + G + + W D + S + D
Sbjct: 351 FNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASAD 410
Query: 340 KSICMWELGGKELECWKGQRTLKISDL 366
I W++ + G T +SD+
Sbjct: 411 GWIKCWDVRKVQRTGGVGAHTSAVSDM 437
Score = 84 (34.6 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
F+ S D +V I+ L+ +L GH+G V V + + + S DRT+++WG
Sbjct: 468 FLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVS-RDGRWIVSGGHDRTVKLWGRN 526
Query: 520 D 520
D
Sbjct: 527 D 527
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 123 (48.4 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 38/172 (22%), Positives = 70/172 (40%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GH V + F + S+S D + +W D G + L GH V +S+
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVW--DYEAG-DFERTLKGHTDSVQDISFDQ 160
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
+ L +C + ++ WD C+ + S P+ I S + DK++ MWE
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWE 220
Query: 347 LG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL---LLLDREAKVE 394
+ G ++ + G R + + DG + + + + ++ +E K E
Sbjct: 221 VATGYCVKTFTGHREW-VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAE 271
Score = 121 (47.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 39/180 (21%), Positives = 77/180 (42%)
Query: 326 WHPDRKWIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
+HP + S + D +I +W+ + E KG T + D+ GK + + + +
Sbjct: 116 FHPVFSLMVSASEDATIKVWDYEAGDFERTLKGH-TDSVQDISFDQTGKLLASCSADMTI 174
Query: 385 LLLDREA-KVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGH 442
L D + + R + D ++S ++ + ++ ++ + +W + V + GH
Sbjct: 175 KLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGY-CVKTFTGH 233
Query: 443 KRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
+ ++R G +AS S D V +W A+ + L H V C+SW P + H
Sbjct: 234 REWVRMVRPNQDG---TLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAH 290
Score = 109 (43.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
++ + GH V + NG ++ S+S D++ +WEV G +K +GH++ V V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVAT--GYCVK-TFTGHREWVRMVR 241
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNC---LHVYEKAGLGLVSC-GWHPD 329
+ D L +C ++ VR W V++ C L +E +V C W P+
Sbjct: 242 PNQDGTLLASCSNDQTVRVWVVATKECKAELREHEH----VVECISWAPE 287
Score = 98 (39.6 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
F+ SGS D + +W ++ + L GH V V ++P + S +DD+T+RIW K
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGG-RFVVSCADDKTLRIWDYK 368
Query: 520 DLN-VKRKDCHSNGV 533
+ +K H + V
Sbjct: 369 NKRCMKTLSAHEHFV 383
Score = 84 (34.6 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 27/105 (25%), Positives = 52/105 (49%)
Query: 414 FLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCF--GGLEQAFIASGSEDSQVY 471
FLL ++ I +W+I + L+ GH +V F GG F+ S ++D +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLV-GH--DNWVRGVLFHPGG---RFVVSCADDKTLR 363
Query: 472 IWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
IW + + L H V + ++ A+P+++ + S D+T+++W
Sbjct: 364 IWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVV-TGSVDQTVKVW 407
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 27/162 (16%), Positives = 68/162 (41%)
Query: 269 KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHP 328
K+ LSGH+ PV+ V + +++ + ++ WD +G+ + + +
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQ 160
Query: 329 DRKWIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
K + S + D +I +W+ G E + G +S + + +G I++ ++ + +
Sbjct: 161 TGKLLASCSADMTIKLWDFQGFECIRTMHGHDH-NVSSVAIMPNGDHIVSASRDKTMKMW 219
Query: 388 DREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLW 427
+ V+ + + + ++D L +Q + +W
Sbjct: 220 EVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 65 (27.9 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 18/99 (18%), Positives = 46/99 (46%)
Query: 332 WIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
++ SG+ DK+I MW++ G L G + + G+ +++ + L + D +
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNW-VRGVLFHPGGRFVVSCADDKTLRIWDYK 368
Query: 391 AK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLW 427
K ++ + +TS + + +++ ++Q + +W
Sbjct: 369 NKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
Score = 48 (22.0 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 21 KRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+R E R IA L S GY ++ + ++E+ + ++ + F +L+ W S+ L K
Sbjct: 7 QRDELNRAIADYLRSNGYEEAYSTFKKEAELDVNDELDKKFAG-LLEKKWT-SVIRLQKK 64
Query: 81 GLVDESVVKSA 91
+ ES + A
Sbjct: 65 VMELESKLNEA 75
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 149 (57.5 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 219 IPSRTLQI--LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKH-KLSGH 275
IP ++L QGH +V + ++ NG LAS S D++A IW ++ +G K +L GH
Sbjct: 6 IPFKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGH 65
Query: 276 QKPVSCVSWSSDDQQLL-TCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIF 334
V + W L+ T +++VR WD SG C E +G ++ + PD +
Sbjct: 66 TDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGEN-INITYKPDGTHVA 124
Query: 335 SGANDKSICMWEL 347
G D + + ++
Sbjct: 125 VGNRDDELTILDV 137
Score = 74 (31.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 413 KFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYI 472
++ V + + LW+I + L + + + +R+ +IAS SED + I
Sbjct: 204 RYFAVGSADSLVSLWDISDMLCL----RTFTKLEWPVRTISFNYSGEYIASASEDLFIDI 259
Query: 473 WHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDR 511
+ + + +P + A+N V WNP ++LA A DD+
Sbjct: 260 ANVQTGRTVHQIPCRA-AMNSVEWNPKY-NLLAYAGDDK 296
>CGD|CAL0002491 [details] [associations]
symbol:DIP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0034388 "Pwp2p-containing
subcomplex of 90S preribosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030515 "snoRNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002491 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 GO:GO:0009267
EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170 GO:GO:0032040
InterPro:IPR007148 Pfam:PF04003 KO:K14556 RefSeq:XP_717569.1
RefSeq:XP_717643.1 ProteinModelPortal:Q5A756 STRING:Q5A756
GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 123 (48.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 198 FHNSSDRDMSLYTDHQCGRDQIPSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
+H ++ + YTD I S ++ I +GH + L+F NG L S S+D S I
Sbjct: 87 YHQETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLVSGSSDSSII 146
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQ-----------------LLTCGVEEA 299
+W DL G V + KL GH+ P++ + S+ Q L++ +
Sbjct: 147 MW--DLIGEVGM-FKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYLVSVSKDGL 203
Query: 300 VRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
++ W++ S C+ + + G +P + + + N + +W L
Sbjct: 204 IKLWELKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVWSL 251
Score = 117 (46.2 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 53/212 (25%), Positives = 88/212 (41%)
Query: 328 PDRKWIFSGANDKSICMWELGGKELECWKGQRT----LKI---SDLEVTSDGK--QIITM 378
PD K + +G NDK + W E + G T LK LE+ D +I
Sbjct: 527 PDGKTLVTGGNDKCVKFWNFK-VEQDIIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPD 585
Query: 379 CKESALLLLDREAKV------ERYIE---EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
K A+ LL+ +V + ++ + S +S D+K ++ + ++ I +W +
Sbjct: 586 AKYLAISLLNNNVQVVFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGL 645
Query: 430 E-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ G+ H+ S +R F G F +SG +D + W + I LP H
Sbjct: 646 DFGDCH--KSIFAHQDSIMNVR--FIGDTHNFFSSG-KDGLIKYWDGDKFECIQRLPAHQ 700
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
V C++ + M S S D +IR+W D
Sbjct: 701 SEVWCMAISDDGLFM-CSTSHDHSIRLWSATD 731
Score = 62 (26.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 13/72 (18%), Positives = 32/72 (44%)
Query: 234 VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLT 293
V +L + +A+ D S IW++ N + GH ++ + + + +L++
Sbjct: 82 VSYLTYHQETNIIAAGYTDGSIKIWDISSNSVII---NFEGHNSSITQLKFDKNGTRLVS 138
Query: 294 CGVEEAVRRWDV 305
+ ++ WD+
Sbjct: 139 GSSDSSIIMWDL 150
Score = 60 (26.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 17/81 (20%), Positives = 33/81 (40%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH+ + + S D +LL ++ W+ S N + + G + C + P
Sbjct: 414 LLGHRFDIRAMDISPQDNKLLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGGT 473
Query: 332 WIFSGANDKSICMWELGGKEL 352
I G + + +++L L
Sbjct: 474 LIVVGFKNGDLELYDLATSSL 494
Score = 60 (26.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 465 SEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVK 524
++ + +Y + + DL+G H + + +P + +LA+AS+ ++IW + NV
Sbjct: 399 AQSADLYSVKQHTIDLLG----HRFDIRAMDISPQDNKLLATASNGE-LKIWNTRSYNVI 453
Query: 525 RKDCHSNGVHYC 536
R G C
Sbjct: 454 RTFVLEGGYALC 465
Score = 59 (25.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/131 (25%), Positives = 56/131 (42%)
Query: 403 ITSFSLS-RDNKFLLVNLLNQEIHLWN-----------IEGEVKLVAKYKGHKRSRFVIR 450
I + +S +DNK LL N E+ +WN +EG L K+ + V+
Sbjct: 421 IRAMDISPQDNK-LLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGG-TLIVVG 478
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH--SGAVNCVSWNPANPHMLASAS 508
G LE +A+ S +V H A + GA P + S A+ + P + L +
Sbjct: 479 FKNGDLELYDLATSSLVDRVEKAHSA-ITVGGAAPSNDDSAAIWSLDITP-DGKTLVTGG 536
Query: 509 DDRTIRIWGLK 519
+D+ ++ W K
Sbjct: 537 NDKCVKFWNFK 547
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
H++E W + + L +S N +W +DL+
Sbjct: 221 HSNECWAMGINPTKDMLITSGNKDQVKVWSLDLS 254
>UNIPROTKB|Q5A756 [details] [associations]
symbol:DIP2 "Putative uncharacterized protein DIP2"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002491 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690
GO:GO:0009267 EMBL:AACQ01000053 EMBL:AACQ01000052 GO:GO:0036170
GO:GO:0032040 InterPro:IPR007148 Pfam:PF04003 KO:K14556
RefSeq:XP_717569.1 RefSeq:XP_717643.1 ProteinModelPortal:Q5A756
STRING:Q5A756 GeneID:3640762 GeneID:3640827 KEGG:cal:CaO19.12572
KEGG:cal:CaO19.5106 Uniprot:Q5A756
Length = 981
Score = 123 (48.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 40/168 (23%), Positives = 73/168 (43%)
Query: 198 FHNSSDRDMSLYTDHQCGRDQIPSRTLQI-LQGHTDEVWFLQFSHNGKYLASSSNDRSAI 256
+H ++ + YTD I S ++ I +GH + L+F NG L S S+D S I
Sbjct: 87 YHQETNIIAAGYTDGSIKIWDISSNSVIINFEGHNSSITQLKFDKNGTRLVSGSSDSSII 146
Query: 257 IWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQ-----------------LLTCGVEEA 299
+W DL G V + KL GH+ P++ + S+ Q L++ +
Sbjct: 147 MW--DLIGEVGM-FKLKGHKGPITGLELLSEQQNTQQDGDNVDDVDDMDDYLVSVSKDGL 203
Query: 300 VRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
++ W++ S C+ + + G +P + + + N + +W L
Sbjct: 204 IKLWELKSQQCIETHLAHSNECWAMGINPTKDMLITSGNKDQVKVWSL 251
Score = 117 (46.2 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 53/212 (25%), Positives = 88/212 (41%)
Query: 328 PDRKWIFSGANDKSICMWELGGKELECWKGQRT----LKI---SDLEVTSDGK--QIITM 378
PD K + +G NDK + W E + G T LK LE+ D +I
Sbjct: 527 PDGKTLVTGGNDKCVKFWNFK-VEQDIIPGTNTTVSHLKFVHTQTLELNEDVLCVRISPD 585
Query: 379 CKESALLLLDREAKV------ERYIE---EDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
K A+ LL+ +V + ++ + S +S D+K ++ + ++ I +W +
Sbjct: 586 AKYLAISLLNNNVQVVFLDTLKLFLTLYGHRLPVLSIDISHDSKLIITSSADKNIKIWGL 645
Query: 430 E-GEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS 488
+ G+ H+ S +R F G F +SG +D + W + I LP H
Sbjct: 646 DFGDCH--KSIFAHQDSIMNVR--FIGDTHNFFSSG-KDGLIKYWDGDKFECIQRLPAHQ 700
Query: 489 GAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
V C++ + M S S D +IR+W D
Sbjct: 701 SEVWCMAISDDGLFM-CSTSHDHSIRLWSATD 731
Score = 62 (26.9 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 13/72 (18%), Positives = 32/72 (44%)
Query: 234 VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLT 293
V +L + +A+ D S IW++ N + GH ++ + + + +L++
Sbjct: 82 VSYLTYHQETNIIAAGYTDGSIKIWDISSNSVII---NFEGHNSSITQLKFDKNGTRLVS 138
Query: 294 CGVEEAVRRWDV 305
+ ++ WD+
Sbjct: 139 GSSDSSIIMWDL 150
Score = 60 (26.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 17/81 (20%), Positives = 33/81 (40%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH+ + + S D +LL ++ W+ S N + + G + C + P
Sbjct: 414 LLGHRFDIRAMDISPQDNKLLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGGT 473
Query: 332 WIFSGANDKSICMWELGGKEL 352
I G + + +++L L
Sbjct: 474 LIVVGFKNGDLELYDLATSSL 494
Score = 60 (26.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 17/72 (23%), Positives = 34/72 (47%)
Query: 465 SEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVK 524
++ + +Y + + DL+G H + + +P + +LA+AS+ ++IW + NV
Sbjct: 399 AQSADLYSVKQHTIDLLG----HRFDIRAMDISPQDNKLLATASNGE-LKIWNTRSYNVI 453
Query: 525 RKDCHSNGVHYC 536
R G C
Sbjct: 454 RTFVLEGGYALC 465
Score = 59 (25.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/131 (25%), Positives = 56/131 (42%)
Query: 403 ITSFSLS-RDNKFLLVNLLNQEIHLWN-----------IEGEVKLVAKYKGHKRSRFVIR 450
I + +S +DNK LL N E+ +WN +EG L K+ + V+
Sbjct: 421 IRAMDISPQDNK-LLATASNGELKIWNTRSYNVIRTFVLEGGYALCCKFLPGG-TLIVVG 478
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGH--SGAVNCVSWNPANPHMLASAS 508
G LE +A+ S +V H A + GA P + S A+ + P + L +
Sbjct: 479 FKNGDLELYDLATSSLVDRVEKAHSA-ITVGGAAPSNDDSAAIWSLDITP-DGKTLVTGG 536
Query: 509 DDRTIRIWGLK 519
+D+ ++ W K
Sbjct: 537 NDKCVKFWNFK 547
Score = 52 (23.4 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 230 HTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLN 263
H++E W + + L +S N +W +DL+
Sbjct: 221 HSNECWAMGINPTKDMLITSGNKDQVKVWSLDLS 254
>MGI|MGI:1929514 [details] [associations]
symbol:Mlst8 "MTOR associated protein, LST8 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0030838
"positive regulation of actin filament polymerization"
evidence=IMP] [GO:0031931 "TORC1 complex" evidence=ISO] [GO:0031932
"TORC2 complex" evidence=ISO] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=ISO] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IMP] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=ISO] [GO:0050731 "positive
regulation of peptidyl-tyrosine phosphorylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1929514 GO:GO:0005829 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0031931 GO:GO:0031932 KO:K08266 GO:GO:0032008
CTD:64223 GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 OMA:NNKGNCY EMBL:AF237676
EMBL:AK002751 EMBL:AK038515 EMBL:AK040100 EMBL:AK048102
EMBL:AK077680 EMBL:AK083731 EMBL:BC015279 IPI:IPI00458055
RefSeq:NP_001239392.1 RefSeq:NP_001239393.1 RefSeq:NP_001239394.1
RefSeq:NP_064372.2 UniGene:Mm.289516 ProteinModelPortal:Q9DCJ1
SMR:Q9DCJ1 IntAct:Q9DCJ1 STRING:Q9DCJ1 PhosphoSite:Q9DCJ1
PaxDb:Q9DCJ1 PRIDE:Q9DCJ1 Ensembl:ENSMUST00000070888
Ensembl:ENSMUST00000179163 GeneID:56716 KEGG:mmu:56716
UCSC:uc008awg.2 InParanoid:Q9DCJ1 NextBio:313187 Bgee:Q9DCJ1
Genevestigator:Q9DCJ1 Uniprot:Q9DCJ1
Length = 326
Score = 180 (68.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 65/301 (21%), Positives = 136/301 (45%)
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
LA++ D + W+ + G+ + + V+ + + D + G + +R +D+
Sbjct: 15 LATAGYDHTVRFWQA--HSGICTR-TVQHQDSQVNALEITPDRSMIAAAGYQH-IRMYDL 70
Query: 306 SSGNCLHV--YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK-GQRTLK 362
+S N + Y+ + S G+H D +W+++G D + +W+L + L+C + Q
Sbjct: 71 NSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAP 130
Query: 363 ISDLEVTSDGKQIITMCKESALLLLDREAKV-ERYIEE-DQTITSFSLSRDNKFLL-VNL 419
I+ + + + ++I + A+ + D + E+ I E + +ITS + D ++ VN
Sbjct: 131 INCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPESSITSAHIDPDASYMAAVNS 190
Query: 420 LNQEIHLWNIEGEV-----KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWH 474
++WN+ G + +L+ K K +R+ ++ F + +A+ S D IW
Sbjct: 191 AGN-CYVWNLTGGIGDDVTQLIPKTKIPAHTRYALQCRFSP-DSTLLATCSADQTCKIWR 248
Query: 475 RASCDLIGAL------PGHSGAVNCVSWNPA---NPHMLASASDDRTIRIWGLKDLNVKR 525
++ L+ L PG S W A + + +AS D R+W ++ +KR
Sbjct: 249 TSNFSLMTELSIKSSNPGESS--RGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKR 306
Query: 526 K 526
+
Sbjct: 307 E 307
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 185 (70.2 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 63/292 (21%), Positives = 125/292 (42%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
I+Q H + +++S++ ++L S + + W+ + N + +S H V +++S
Sbjct: 172 IMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNN----VNNISAHANGVRDIAFS 227
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
+D + LTCG + A++ W+ ++G + S WHP+ I SG+ D + +W
Sbjct: 228 PNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLW 287
Query: 346 ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
+ + C K + V Q + A + DR + I + +T+
Sbjct: 288 D--PRSANCVSTLHGFKHT---VNKTRFQPNGTARLLASVSRDRSCR----IFDLRTMKD 338
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ RD++ L + IH + A Y G S F++ S ++ +
Sbjct: 339 MLVIRDSETDLSCVAWHPIH-----ASMVTTAAYNG-SISNFLLDSYIPDSNESVPKRSN 392
Query: 466 EDSQVYIWHRASCDLIGALP-GHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+S + + D + +P H A++ V ++P H+L +A D+T R W
Sbjct: 393 NNSNLSTNTNNTIDAVQKIPYAHEKAIHAVEYHPLG-HLLCTAGSDKTARFW 443
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 185 (70.2 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 63/292 (21%), Positives = 125/292 (42%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
I+Q H + +++S++ ++L S + + W+ + N + +S H V +++S
Sbjct: 172 IMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNN----VNNISAHANGVRDIAFS 227
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
+D + LTCG + A++ W+ ++G + S WHP+ I SG+ D + +W
Sbjct: 228 PNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLW 287
Query: 346 ELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
+ + C K + V Q + A + DR + I + +T+
Sbjct: 288 D--PRSANCVSTLHGFKHT---VNKTRFQPNGTARLLASVSRDRSCR----IFDLRTMKD 338
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ RD++ L + IH + A Y G S F++ S ++ +
Sbjct: 339 MLVIRDSETDLSCVAWHPIH-----ASMVTTAAYNG-SISNFLLDSYIPDSNESVPKRSN 392
Query: 466 EDSQVYIWHRASCDLIGALP-GHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
+S + + D + +P H A++ V ++P H+L +A D+T R W
Sbjct: 393 NNSNLSTNTNNTIDAVQKIPYAHEKAIHAVEYHPLG-HLLCTAGSDKTARFW 443
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 179 (68.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 52/195 (26%), Positives = 87/195 (44%)
Query: 333 IFSGANDKSICMWELGGKELECWKGQRTLK-----ISDLEVTSDGKQIITMCKESALLL- 386
+ SG+ DK++ +W L E +R+L+ +SD ++SDG ++ + +L L
Sbjct: 31 LLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLW 90
Query: 387 -LDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
L ++ + S S S DN+ ++ ++ I LWN G+ K KGH
Sbjct: 91 ELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEW 150
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLA 505
+R + I S D V +W ASC L GH+G +N V+ +P + + A
Sbjct: 151 VSCVRFS-PNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISP-DGSLCA 208
Query: 506 SASDDRTIRIWGLKD 520
S D +W L +
Sbjct: 209 SGGKDGVTMLWDLNE 223
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 72/284 (25%), Positives = 128/284 (45%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S RD +L + +Q + L+GH+ V S +G Y S+S D+S +WE
Sbjct: 33 SGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWE- 91
Query: 261 DLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLH-VYEKAGL 319
L+ G T + GH V VS+S+D++Q+++ + ++ W+ + G+C + + +K
Sbjct: 92 -LSSGQTTR-TFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWN-TLGDCKYTITDKGHT 148
Query: 320 GLVSC---GWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQII 376
VSC +P I S DK + +WEL L+ T I+ + ++ DG
Sbjct: 149 EWVSCVRFSPNPQNPVIVSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCA 208
Query: 377 TMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVK- 434
+ K+ +L D E+K + I + S N++ L + I ++++E + K
Sbjct: 209 SGGKDGVTMLWDLNESKHLYSLHAGDEIHALVFS-PNRYWLCAATSSSITIFDLEKKSKV 267
Query: 435 --LVAKY--KGHK-RSRFVIRSCFGGLEQAFIASGSEDSQVYIW 473
L +Y KG K R + + Q A G D+++ W
Sbjct: 268 DELKPEYIEKGKKSREPECVSLAWSADGQTLFA-GYTDNKIRAW 310
Score = 151 (58.2 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 63/271 (23%), Positives = 117/271 (43%)
Query: 177 PERRLE---HLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDE 233
P+R LE H+V ++ A S D+ + L+ + +T + GHT++
Sbjct: 55 PKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLW-------ELSSGQTTRTFVGHTND 107
Query: 234 VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQ--L 291
V + FS + + + S S DR+ +W + T+ K GH + VSCV +S + Q +
Sbjct: 108 VLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDK--GHTEWVSCVRFSPNPQNPVI 165
Query: 292 LTCGVEEAVRRWDVSSGNCL--HVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGG 349
++ G ++ V+ W+++S H+ + V+ PD SG D +W+L
Sbjct: 166 VSAGWDKLVKVWELASCRLQTDHIGHTGYINTVTIS--PDGSLCASGGKDGVTMLWDLNE 223
Query: 350 KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE--AKVER----YIEE---- 399
+ + +I L V S + + S++ + D E +KV+ YIE+
Sbjct: 224 SK-HLYSLHAGDEIHAL-VFSPNRYWLCAATSSSITIFDLEKKSKVDELKPEYIEKGKKS 281
Query: 400 -DQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
+ S + S D + L + +I W +
Sbjct: 282 REPECVSLAWSADGQTLFAGYTDNKIRAWGV 312
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/127 (33%), Positives = 62/127 (48%)
Query: 227 LQGHTDEVWFLQFS-HNGKYLASSSNDRSAIIWEV--DLNGGVTLKHKLSGHQKPVS-CV 282
L+GH V L S N L S S D++ IIW + D K L GH VS CV
Sbjct: 11 LEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDEQAYGYPKRSLEGHSHIVSDCV 70
Query: 283 SWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSI 342
SSD L+ ++++R W++SSG + ++S + D + I SG+ D++I
Sbjct: 71 I-SSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDRTI 129
Query: 343 CMWE-LG 348
+W LG
Sbjct: 130 KLWNTLG 136
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 181 (68.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 59/291 (20%), Positives = 124/291 (42%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH D V + FS N K LAS S D ++W + ++ +GH+ V+CV++S
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRA---YRFTGHKDAVTCVNFSPS 103
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L + ++ VR W + V+ + S + D + + ++DK+I +W
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITS 405
++ Q + + + DG+ I++ + + L D+ ++ V Y E +T
Sbjct: 164 HRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 223
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ ++ + +W++ +L+ Y+ H + + G ++ + S
Sbjct: 224 VDFHPSGTCVAAAGMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSG---NYLVTAS 279
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
DS + I L+ L GH G V+++ + + SD++ + +W
Sbjct: 280 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ-VMVW 329
Score = 165 (63.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 56/256 (21%), Positives = 112/256 (43%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D V + FS +G LAS S D++ IW ++ G T+ H V V + SD
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTV---FRAHTATVRSVHFCSDG 146
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWEL 347
Q +T ++ ++ W L + + V C + PD + I S ++DK++ +W+
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQH-INWVRCAKFSPDGRLIVSASDDKTVKLWDK 205
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKV-ERYIEEDQTITS 405
+E + ++ ++ G + ++ + + D R ++ + Y + +
Sbjct: 206 TSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 265
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
S +L+ + + + ++ E +L+ GH+ + F + F ASG
Sbjct: 266 LSFHPSGNYLVTASSDSTLKILDLM-EGRLLYTLHGHQGPATTV--AFSRTGEYF-ASGG 321
Query: 466 EDSQVYIWHRASCDLI 481
D QV +W +++ D+I
Sbjct: 322 SDEQVMVW-KSNFDVI 336
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 44/211 (20%), Positives = 95/211 (45%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ + HT V + F +G+ ++S+D++ +W LS H V C +S
Sbjct: 129 VFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQ---KFLFSLSQHINWVRCAKFS 185
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFSGANDKSICM 344
D + +++ ++ V+ WD +S C+H Y + G G V+ +HP + + D ++ +
Sbjct: 186 PDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCVAAAGMDNTVKV 244
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQ-T 402
W++ L + ++ L G ++T +S L +LD E ++ + Q
Sbjct: 245 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGP 304
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV 433
T+ + SR ++ ++++ +W +V
Sbjct: 305 ATTVAFSRTGEYFASGGSDEQVMVWKSNFDV 335
Score = 152 (58.6 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 58/259 (22%), Positives = 113/259 (43%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC- 324
+L+ GH+ V+CV +S + +QL + ++ + W + + Y G V+C
Sbjct: 41 SLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQS--RAYRFTGHKDAVTCV 98
Query: 325 GWHPDRKWIFSGANDKSICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESA 383
+ P + SG+ DK++ +W K E ++ T + + SDG+ +T +
Sbjct: 99 NFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAH-TATVRSVHFCSDGQSFVTASDDKT 157
Query: 384 LLLLD--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG 441
+ + R+ + + + S D + ++ ++ + LW+ + V Y
Sbjct: 158 IKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSR-ECVHSYCE 216
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H FV F A+G D+ V +W + L+ HS AVN +S++P+
Sbjct: 217 H--GGFVTYVDFHPSGTCVAAAGM-DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 273
Query: 502 HMLASASDDRTIRIWGLKD 520
+ L +AS D T++I L +
Sbjct: 274 Y-LVTASSDSTLKILDLME 291
Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/189 (22%), Positives = 89/189 (47%)
Query: 355 WKGQRTLKISDLEVTSDGKQIITMCKESALLL--LDREAKVERYIEEDQTITSFSLSRDN 412
+KG R ++ ++ + + KQ+ + +S L++ + +++ R+ +T + S
Sbjct: 46 FKGHRDA-VTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSG 104
Query: 413 KFLLVNLLNQEIHLW--NIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQV 470
L ++ + +W NI+GE + ++ H + + C G Q+F+ + S+D +
Sbjct: 105 HLLASGSRDKTVRIWVPNIKGESTV---FRAHTATVRSVHFCSDG--QSFVTA-SDDKTI 158
Query: 471 YIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKDLNVKRKDCHS 530
+W + +L H V C ++P + ++ SASDD+T+++W R+ HS
Sbjct: 159 KVWSTHRQKFLFSLSQHINWVRCAKFSP-DGRLIVSASDDKTVKLWD----KTSRECVHS 213
Query: 531 NGVHYCNGG 539
YC G
Sbjct: 214 ----YCEHG 218
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 187 (70.9 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 580 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRFHPN 636
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 637 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 696
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
G G + KG T + L + DG+ + + ++ + L D K +E D T+
Sbjct: 697 GHGLMVGELKGH-TDTVCSLRFSRDGEILASGSMDNTVRLWDA-IKAFEDLETDDFTTA 753
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL SSS D + +W + T GH
Sbjct: 527 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHN 583
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 584 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVNCTRFHPNSNYVA 641
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 642 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 700
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V T+ S SRD + L ++ + LW+
Sbjct: 701 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/226 (26%), Positives = 97/226 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + D I G D ++ +W + K+L K L + D E +
Sbjct: 460 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKE-S 518
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I M +++A E K+ + S S D +LL + + + LW++
Sbjct: 519 DDVLERI-MDEKTA-----SELKI--LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 570
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ LV YKGH V + F F+ SG D +W + GH
Sbjct: 571 QTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHLA 626
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
VNC ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 627 DVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 671
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+ + VR W + + CL Y+ + + P
Sbjct: 537 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 596
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTS---DGKQIITMCKESALLLL 387
+ SG +D+ +W + L + G ++D+ T + + T + + L
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGH----LADVNCTRFHPNSNYVATGSADRTVRLW 652
Query: 388 D--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D V + I S + S + +FL + + LW+I G +V + KGH +
Sbjct: 653 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDT 711
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 712 VCSLRFSRDG---EILASGSMDNTVRLW 736
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 47/237 (19%), Positives = 101/237 (42%)
Query: 286 SDDQQLLTCGVEEAVRR-WDVSSGNCLHV-YEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
+ D L+ ++ + R D + + L + Y +G + + PDR ++ S + D ++
Sbjct: 508 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSG-PVYGASFSPDRNYLLSSSEDGTVR 566
Query: 344 MWELGGKELECWKGQR--TLKISDLEVTSDGKQIITMCKE--SALLLLDREAKVERYIEE 399
+W L + C G + + D + + G ++ + + L D + +
Sbjct: 567 LWSL--QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 624
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
+ ++ ++ ++ + LW++ V + GHK I S
Sbjct: 625 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP---IHSLTFSPNGR 680
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
F+A+G+ D +V +W ++G L GH+ V + ++ + +LAS S D T+R+W
Sbjct: 681 FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 736
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 187 (70.9 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 48/179 (26%), Positives = 85/179 (47%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH VW QFS G Y S +DR A +W D + + +GH V+C + +
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRI---FAGHLADVNCTRFHPN 638
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
+ T + VR WDV +GNC+ ++ + S + P+ +++ +GA D + +W++
Sbjct: 639 SNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI 698
Query: 348 G-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQTITS 405
G G + KG T + L + DG+ + + ++ + L D K +E D T+
Sbjct: 699 GHGLMVGELKGH-TDTVCSLRFSRDGEILASGSMDNTVRLWDA-IKAFEDLETDDFTTA 755
Score = 178 (67.7 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 55/217 (25%), Positives = 97/217 (44%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D+ + L+IL GH+ V+ FS + YL SSS D + +W + T GH
Sbjct: 529 DEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQT---FTCLVGYKGHN 585
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCG-WHPDRKWIF 334
PV +S ++ G + R W L ++ AG L V+C +HP+ ++
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF--AGHLADVNCTRFHPNSNYVA 643
Query: 335 SGANDKSICMWE-LGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REA 391
+G+ D+++ +W+ L G + + G + I L + +G+ + T + +LL D
Sbjct: 644 TGSADRTVRLWDVLNGNCVRIFTGHKG-PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 702
Query: 392 KVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWN 428
V T+ S SRD + L ++ + LW+
Sbjct: 703 MVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/226 (26%), Positives = 97/226 (42%)
Query: 310 CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
C + + A GL + D I G D ++ +W + K+L K L + D E +
Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKE-S 520
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
D + I M +++A E K+ + S S D +LL + + + LW++
Sbjct: 521 DDVLERI-MDEKTA-----SELKI--LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ LV YKGH V + F F+ SG D +W + GH
Sbjct: 573 QTFTCLVG-YKGHNYP--VWDTQFSPYGYYFV-SGGHDRVARLWATDHYQPLRIFAGHLA 628
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKDLN-VKRKDCHSNGVH 534
VNC ++P N + +A+ S DRT+R+W + + N V+ H +H
Sbjct: 629 DVNCTRFHP-NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH 673
Score = 130 (50.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 51/208 (24%), Positives = 86/208 (41%)
Query: 272 LSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRK 331
L GH PV S+S D LL+ + VR W + + CL Y+ + + P
Sbjct: 539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGY 598
Query: 332 WIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTS---DGKQIITMCKESALLLL 387
+ SG +D+ +W + L + G ++D+ T + + T + + L
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGH----LADVNCTRFHPNSNYVATGSADRTVRLW 654
Query: 388 D--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRS 445
D V + I S + S + +FL + + LW+I G +V + KGH +
Sbjct: 655 DVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI-GHGLMVGELKGHTDT 713
Query: 446 RFVIRSCFGGLEQAFIASGSEDSQVYIW 473
+R G +ASGS D+ V +W
Sbjct: 714 VCSLRFSRDG---EILASGSMDNTVRLW 738
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 47/237 (19%), Positives = 101/237 (42%)
Query: 286 SDDQQLLTCGVEEAVRR-WDVSSGNCLHV-YEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
+ D L+ ++ + R D + + L + Y +G + + PDR ++ S + D ++
Sbjct: 510 ASDLSLIDKESDDVLERIMDEKTASELKILYGHSG-PVYGASFSPDRNYLLSSSEDGTVR 568
Query: 344 MWELGGKELECWKGQR--TLKISDLEVTSDGKQIITMCKE--SALLLLDREAKVERYIEE 399
+W L + C G + + D + + G ++ + + L D + +
Sbjct: 569 LWSL--QTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH 626
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
+ ++ ++ ++ + LW++ V + GHK I S
Sbjct: 627 LADVNCTRFHPNSNYVATGSADRTVRLWDVLNG-NCVRIFTGHKGP---IHSLTFSPNGR 682
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
F+A+G+ D +V +W ++G L GH+ V + ++ + +LAS S D T+R+W
Sbjct: 683 FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEILASGSMDNTVRLW 738
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 157 (60.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 44/192 (22%), Positives = 90/192 (46%)
Query: 332 WIFSGANDKS-ICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
WI G++ + +WE + + +S L+ +SDG++IIT + + + D
Sbjct: 310 WIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMN 369
Query: 391 AK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFV 448
+ + + + ++ S+ L + L+ + W++ + + R +F
Sbjct: 370 SGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLI-RYRNFRTFTAPSRVQF- 427
Query: 449 IRSCFG-GLEQAFIASGSEDS-QVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLAS 506
SC + +GS+DS ++++W + L+ L GH G V+ +S+N + +LAS
Sbjct: 428 --SCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGS-LLAS 484
Query: 507 ASDDRTIRIWGL 518
S D+T+RIW +
Sbjct: 485 GSWDKTVRIWDI 496
Score = 140 (54.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 54/223 (24%), Positives = 95/223 (42%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
Q H D + LQ+S +G+ + + ++D +W D+N G + + H VS + +S
Sbjct: 336 QSHYDALSTLQYSSDGQRIITGADDGKIKVW--DMNSGFCIV-TFTQHTSAVSGLCFSKR 392
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKWIFSGANDK-SICMW 345
L + ++ +VR WD+ + SC P + + +G+ D I MW
Sbjct: 393 GNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMW 452
Query: 346 ELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD---REAKVERY-IEED 400
+ G+ LE G +S L S G + + + + + D R VE I D
Sbjct: 453 SVQTGQLLETLAGHEG-PVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSD 511
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHK 443
+ S + D K + V L+ ++ WN++ E K + G K
Sbjct: 512 --VLSLAFHPDGKEVCVASLDGQLTFWNVQ-EGKQTSLIDGRK 551
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 56/264 (21%), Positives = 113/264 (42%)
Query: 175 MIPERRLEHLVEQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRT----LQILQGH 230
+I ER H Q L+ A FH +S+ + ++ G ++PS T L I Q +
Sbjct: 244 LIKER---HYFNQNSKLRCAA--FHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQSN 298
Query: 231 TDEVWFLQFSHNGKYLA-SSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQ 289
D L + G ++A SS ++WE V LK + H +S + +SSD Q
Sbjct: 299 IDT---LTVNSTGDWIAIGSSKLGQLLVWEWQSESYV-LKQQ--SHYDALSTLQYSSDGQ 352
Query: 290 QLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-G 348
+++T + ++ WD++SG C+ + + + + +FS + D S+ W+L
Sbjct: 353 RIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIR 412
Query: 349 GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL---DREAKVERYIEEDQTITS 405
+ + ++ S + V G+ + ++S + + +E + ++S
Sbjct: 413 YRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSS 472
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNI 429
S + L ++ + +W+I
Sbjct: 473 LSFNSSGSLLASGSWDKTVRIWDI 496
Score = 79 (32.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D++ + +S + ++ S+S D +A + VD G L+GH+ V +S D
Sbjct: 144 GHFDDIVSISWSADSRFFISTSKDLTARLHSVDPIEGFH-PCALTGHKNTVVSGFFSKDQ 202
Query: 289 QQLLTCGVEEAVRRWDVS 306
Q + T + A+ W S
Sbjct: 203 QTIYTVSKDGALFVWKYS 220
Score = 71 (30.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 25/118 (21%), Positives = 51/118 (43%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLN------GGVTLKHKLSGHQKPVSCVSWSSDDQQ 290
++FS NGK+ A S + +W + L + +GH + +SWS+D +
Sbjct: 102 IEFSPNGKFFAVSLG-KLIQVWRTPNSLEEREFAPFVLHREYTGHFDDIVSISWSADSRF 160
Query: 291 LLTCGVEEAVRRWDVSSGNCLHVYEKAGLG--LVSCGWHPDRKWIFSGANDKSICMWE 346
++ + R V H G +VS + D++ I++ + D ++ +W+
Sbjct: 161 FISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWK 218
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE 259
L GH + V FS + + + + S D + +W+
Sbjct: 186 LTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWK 218
>UNIPROTKB|Q969U6 [details] [associations]
symbol:FBXW5 "F-box/WD repeat-containing protein 5"
species:9606 "Homo sapiens" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051298
"centrosome duplication" evidence=IMP] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR011041
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 UniPathway:UPA00143
GO:GO:0005737 GO:GO:0003824 GO:GO:0051298 Gene3D:2.130.10.10
PROSITE:PS00678 EMBL:CH471090 SUPFAM:SSF81383 GO:GO:0016567
EMBL:AL807752 GO:GO:0019005 GO:GO:0031146 GO:GO:0080008
SUPFAM:SSF50952 EMBL:AK026081 EMBL:AK315738 EMBL:BC000850
EMBL:BC004541 EMBL:BC009429 EMBL:BC014297 EMBL:BC014130
EMBL:AB209726 EMBL:AL137631 EMBL:AF217998 EMBL:AF258569
IPI:IPI00056507 IPI:IPI00514362 PIR:T46483 RefSeq:NP_061871.1
UniGene:Hs.522507 ProteinModelPortal:Q969U6 SMR:Q969U6
IntAct:Q969U6 MINT:MINT-276597 STRING:Q969U6 PhosphoSite:Q969U6
DMDM:44887886 PRIDE:Q969U6 DNASU:54461 Ensembl:ENST00000325285
Ensembl:ENST00000428398 Ensembl:ENST00000433269
Ensembl:ENST00000443788 GeneID:54461 KEGG:hsa:54461 UCSC:uc004cjx.3
CTD:54461 GeneCards:GC09M139834 HGNC:HGNC:13613 HPA:HPA046615
MIM:609072 neXtProt:NX_Q969U6 PharmGKB:PA134928070 eggNOG:NOG81436
HOVERGEN:HBG051595 InParanoid:Q969U6 KO:K10263 OMA:LWLNNAF
OrthoDB:EOG4B8JCP PhylomeDB:Q969U6 ChiTaRS:FBXW5 GenomeRNAi:54461
NextBio:56717 ArrayExpress:Q969U6 Bgee:Q969U6 Genevestigator:Q969U6
GermOnline:ENSG00000159069 Uniprot:Q969U6
Length = 566
Score = 123 (48.4 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 37/96 (38%), Positives = 48/96 (50%)
Query: 206 MSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGG 265
MS Y + Q D +P +Q L+ HTD+V L FSH+G AS S D + IW DL
Sbjct: 67 MSWYEEFQRLYDTVPCVEVQTLREHTDQVLHLSFSHSGYQFASCSKDCTVKIWSNDLT-- 124
Query: 266 VTLKHKLSGHQKPV--SCVSWSS---DDQQLLTCGV 296
++L H S +P S +S DD LL GV
Sbjct: 125 ISLLH--SADMRPYNWSYTQFSQFNKDDSLLLASGV 158
Score = 112 (44.5 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 453 FGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRT 512
F + + F+ASG+ED YIW R + L H VN V ++P +L +ASDD T
Sbjct: 476 FLDVSRDFVASGAEDRHGYIWDRHYNICLARLR-HEDVVNSVVFSPQEQELLLTASDDAT 534
Query: 513 IRIW 516
I+ W
Sbjct: 535 IKAW 538
Score = 39 (18.8 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 403 ITSFSLSRDNKFLLVN 418
I LS DN++L VN
Sbjct: 405 IIGMGLSPDNRYLYVN 420
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 185 (70.2 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 70/294 (23%), Positives = 131/294 (44%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+L GH+D V LQ N LAS S D + +W + V L L GH V+C+ +
Sbjct: 268 VLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVAL---LEGHSSGVTCLQF- 321
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
D +L++ +++ +R W+ + C+ + V C D + SG+ D ++ +W
Sbjct: 322 -DQCKLISGSMDKTIRIWNYRTSECISILH-GHTDSVLCLTF-DSTLLVSGSADCTVKLW 378
Query: 346 EL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLL--LDREAKVERYIEEDQT 402
GGK + +G T ++ + + D +++ +S + + L+ + +
Sbjct: 379 HFSGGKRITL-RGH-TGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGP 436
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIA 462
+ S +L+ D++ +L + I W+IE + K V GH + I + + +
Sbjct: 437 VQSLALA-DSRLFSCSL-DGTIKQWDIEKK-KCVHTLFGHIEGVWEIAA-----DHLRLI 488
Query: 463 SGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
SG+ D V +W +C+ + L HS V V+ + S S+D I +W
Sbjct: 489 SGAHDGVVKVWE--ACECVHTLKNHSEPVTSVALGDCE---VVSGSEDGKIYLW 537
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 66/296 (22%), Positives = 130/296 (43%)
Query: 230 HTDEVWFLQFSHNGK----YLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
H D +W + + K + + S D +W+ + + L+ L GHQ V V+ S
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWS-DEKLELQWTLEGHQLGVVSVNIS 73
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMW 345
+ + ++ +R WD+ +G + + + + + PD K+I +G++ + ++
Sbjct: 74 QNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIF 133
Query: 346 --ELGGKELEC-WKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIE-ED 400
E G KE +G+ L I+ + DGK + + + + + D K+ +E
Sbjct: 134 GVESGKKEHSLDTRGKFILSIA---YSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHA 190
Query: 401 QTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAF 460
I S + S D++ L+ + I +++++ L GH +V+ F + F
Sbjct: 191 MPIRSLTFSPDSQLLVTASDDGYIKIYDVQ-HANLAGTLSGH--GSWVLSVAFSPDDTHF 247
Query: 461 IASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
++S S D + +W +S + H V V +NP ++ SA DDR I I+
Sbjct: 248 VSSSS-DKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIV-SAGDDRAIHIY 301
Score = 151 (58.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 61/252 (24%), Positives = 112/252 (44%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC--VSW 284
L+GH V + S NG ASSS D +W DL G +K +G PV V++
Sbjct: 60 LEGHQLGVVSVNISQNGAIAASSSLDAHIRLW--DLETGKQIKSMDAG---PVDAWTVAF 114
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
S D + + T V + V SG H + G ++S + PD K++ SGA D I +
Sbjct: 115 SPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Query: 345 WELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIE-EDQ 401
+++ GK L +G + I L + D + ++T + + + D + A + +
Sbjct: 175 FDIATGKLLHTLEGH-AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGS 233
Query: 402 TITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ S + S D+ + + ++ I +W+ V + H+ + ++ G + I
Sbjct: 234 WVLSVAFSPDDTHFVSSSSDKSIKVWDTSSR-SCVNTFFDHQDQVWSVKYNPTGSK---I 289
Query: 462 ASGSEDSQVYIW 473
S +D ++I+
Sbjct: 290 VSAGDDRAIHIY 301
Score = 146 (56.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/152 (26%), Positives = 72/152 (47%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
+ +S +GKYLAS + D II D+ G L H L GH P+ +++S D Q L+T
Sbjct: 154 IAYSPDGKYLASGAID--GIINIFDIATGKLL-HTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 297 EEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK 356
+ ++ +DV N G ++S + PD S ++DKSI +W+ +
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
Query: 357 GQRTLKISDLEVTSDGKQIITMCKESALLLLD 388
++ ++ G +I++ + A+ + D
Sbjct: 271 FDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/130 (26%), Positives = 66/130 (50%)
Query: 217 DQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
D + L L+GH + L FS + + L ++S+D I++V L LSGH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ---HANLAGTLSGHG 232
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSG 336
V V++S DD ++ +++++ WD SS +C++ + + S ++P I S
Sbjct: 233 SWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSA 292
Query: 337 ANDKSICMWE 346
+D++I +++
Sbjct: 293 GDDRAIHIYD 302
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 39/196 (19%), Positives = 101/196 (51%)
Query: 333 IFSGANDKSICMWELGGKELEC-W--KGQRTLKISDLEVTSDGKQIITMCKESALLLLDR 389
I +G+ D + +W+ ++LE W +G + L + + ++ +G + ++ + L D
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQ-LGVVSVNISQNGAIAASSSLDAHIRLWDL 93
Query: 390 EAKVERYIEEDQTITSFSL--SRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRF 447
E + + + ++++ S D+K++ +++++ +E K ++ R +F
Sbjct: 94 ETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKK---EHSLDTRGKF 150
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASA 507
++ + + ++ASG+ D + I+ A+ L+ L GH+ + ++++P + +L +A
Sbjct: 151 ILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTA 208
Query: 508 SDDRTIRIWGLKDLNV 523
SDD I+I+ ++ N+
Sbjct: 209 SDDGYIKIYDVQHANL 224
>UNIPROTKB|Q17QU5 [details] [associations]
symbol:MLST8 "Target of rapamycin complex subunit LST8"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0050731 "positive regulation of peptidyl-tyrosine
phosphorylation" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0030838 "positive
regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0050731 GO:GO:0030838 GO:GO:0032314 KO:K08266 GO:GO:0032008
EMBL:BT021562 EMBL:BC118176 IPI:IPI00908071 RefSeq:NP_001030488.1
UniGene:Bt.3376 ProteinModelPortal:Q17QU5 STRING:Q17QU5
PRIDE:Q17QU5 Ensembl:ENSBTAT00000013104 Ensembl:ENSBTAT00000053181
GeneID:535236 KEGG:bta:535236 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 NextBio:20876671
ArrayExpress:Q17QU5 Uniprot:Q17QU5
Length = 326
Score = 179 (68.1 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 65/300 (21%), Positives = 135/300 (45%)
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
LA++ D + W+ + G+ + + V+ + + D + G + +R +D+
Sbjct: 15 LATAGYDHTVRFWQA--HSGICTR-TVQHQDSQVNALEITPDRTMIAAAGYQH-IRMYDL 70
Query: 306 SSGNCLHV--YEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK-GQRTLK 362
+S N + Y+ + S G+H D +W+++G D + +W+L + L+C + Q
Sbjct: 71 NSNNPNPIISYDGVNKNVASVGFHEDGRWMYTGGEDCTARIWDLRSRNLQCQRIFQVNAP 130
Query: 363 ISDLEVTSDGKQIITMCKESALLLLDREAKV-ERYIEEDQ-TITSFSLSRDNKFLLVNLL 420
I+ + + + ++I + A+ + D + E+ I E + +ITS + D ++
Sbjct: 131 INCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLIPEPEVSITSAHIDPDASYMAAVNS 190
Query: 421 NQEIHLWNIEG----EV-KLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
++WN+ G EV +L+ K K +R+ ++ F + +A+ S D IW
Sbjct: 191 TGNCYVWNLTGGIGDEVTQLIPKTKIPAHTRYALQCRFSP-DSTLLATCSADQTCKIWRT 249
Query: 476 ASCDLIGAL------PGHSGAVNCVSWNPA---NPHMLASASDDRTIRIWGLKDLNVKRK 526
++ L+ L PG S W A + + +AS D R+W ++ +KR+
Sbjct: 250 SNFSLMTELSIKSSNPGESS--RGWMWGCAFSGDSQYIVTASSDNLARLWCVETGEIKRE 307
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 82/311 (26%), Positives = 129/311 (41%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHK-LSGHQKPVS 280
+ + L H D+V FS LA+ S D++ ++ L+ L H L H V
Sbjct: 3 KLIHTLADHGDDVSCCAFSST--LLATCSLDKTIRLYS--LSDFAELPHSPLKFHTYAVH 58
Query: 281 CVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFSGAND 339
C S+S L +C + W SG+ L V E+ G V C + PD ++ SGA D
Sbjct: 59 CCSFSPSGHVLASCSTDGTTVLWSAHSGHTLTVLEQPGGSPVRVCCFSPDSTYLASGAAD 118
Query: 340 KSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKV---ERY 396
S+ +W +L + + + DG ++T L + D + E+
Sbjct: 119 GSVVLWNAHSYKLYRCGSVKDSSLVACAFSPDGGLLVTGSSGGDLTVWDDRMRCLHSEKA 178
Query: 397 IEEDQTITSFS---LSRDNKFL-LVNLLN--Q--EIHLWNIEGEVKL--VAKYKGHKRSR 446
+ T SFS LS L L L + Q EI LW + L KY+
Sbjct: 179 HDLGITCCSFSSQPLSGGEHGLQLYRLASCGQDCEIKLWVVSFTRVLGFELKYRSTLSGH 238
Query: 447 FV-IRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLA 505
+ +C + +ASGS D V I+ + ++ L H+ V ++ P N +LA
Sbjct: 239 CAPVLACAFSHDGQMLASGSVDKSVIIYDIGTQSVLHTLTQHTRYVTTCAFAP-NTLLLA 297
Query: 506 SASDDRTIRIW 516
+ S D+T+ IW
Sbjct: 298 TGSMDKTVNIW 308
Score = 126 (49.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/116 (28%), Positives = 58/116 (50%)
Query: 246 LASSSNDRSAIIWEVDLNG--GVTLKHK--LSGHQKPVSCVSWSSDDQQLLTCGVEEAVR 301
LAS D +W V G LK++ LSGH PV ++S D Q L + V+++V
Sbjct: 205 LASCGQDCEIKLWVVSFTRVLGFELKYRSTLSGHCAPVLACAFSHDGQMLASGSVDKSVI 264
Query: 302 RWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWKG 357
+D+ + + LH + + +C + P+ + +G+ DK++ +W+ E C G
Sbjct: 265 IYDIGTQSVLHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQFD-LETPCQAG 319
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 371 DGKQIITMCKESA-----LLLLDREAKVERYIEEDQT-ITSFSLSRDNKFL 415
DGK+++ + KES + L +KV R I+E +T + S S ++F+
Sbjct: 359 DGKELLHLTKESLAGDMKIESLGLRSKVLRSIDELRTRMESLSSGIPDEFI 409
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 127 (49.8 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 33/123 (26%), Positives = 52/123 (42%)
Query: 227 LQGHTDE-VWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ H D WFL ++ G LAS DRS IW + + + GHQ+ V V+WS
Sbjct: 11 IPAHPDSRCWFLAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWS 70
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGN--CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
L + + W + + C+ E + S W P + + + DKS+
Sbjct: 71 PCGNYLASASFDATTCIWKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW 130
Query: 344 MWE 346
+WE
Sbjct: 131 VWE 133
Score = 115 (45.5 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ +GH V + +S G YLAS+S D + IW+ + + + L GH+ V V+W+
Sbjct: 56 LCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNKDDFECVT-TLEGHENEVKSVAWA 114
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNC----LHV-YEKAGLGLVSCGWHPDRKWIFSGANDK 340
L TC +++V W+ + N V Y+ + V WHP ++ + S + D
Sbjct: 115 PSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVL--WHPSQELLASASYDD 172
Query: 341 SICMWELGGKELECWKGQRTLK 362
++ ++ +E + W TL+
Sbjct: 173 TVKLYR---EEEDDWVCCATLE 191
Score = 101 (40.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEV 260
S D + LY + + D + TL+ GH VW L F +G+ LAS S+DR+ IW
Sbjct: 169 SYDDTVKLYREEE--DDWVCCATLE---GHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223
Query: 261 DLNG---GVTLKHK---------LSG-HQKPVSCVSWSSDDQQLLT-CGVEEAVRRWDVS 306
L G GV LSG H + + V+W L T CG ++A+R ++
Sbjct: 224 YLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACG-DDAIRVFEED 282
Query: 307 SGN 309
G+
Sbjct: 283 PGS 285
Score = 98 (39.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 458 QAFIASGSEDSQVYIWHRASCDLI--GALPGHSGAVNCVSWNPANPHMLASASDDRTIRI 515
Q +AS S D V ++ D + L GH V ++++P+ LAS SDDRT+RI
Sbjct: 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-LASCSDDRTVRI 220
Query: 516 W 516
W
Sbjct: 221 W 221
Score = 94 (38.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 480 LIGALP-GHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
L LP HS VNCV+WNP +LAS SDD + W
Sbjct: 294 LTAHLPQAHSQDVNCVAWNPKEQGLLASCSDDGELAFW 331
Score = 92 (37.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 28/129 (21%), Positives = 59/129 (45%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L+GH +EV + ++ +G LA+ S D+S +WE + + ++ + + V W
Sbjct: 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHP 160
Query: 287 DDQQLLTCGVEEAVR--RWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
+ L + ++ V+ R + C E + S + P + + S ++D+++ +
Sbjct: 161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220
Query: 345 WE--LGGKE 351
W L G E
Sbjct: 221 WRQYLPGNE 229
Score = 83 (34.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/232 (21%), Positives = 95/232 (40%)
Query: 282 VSWSSDDQQLLTCGVEEAVRRW--DVSSGNCLHVYEKAGLGLV-SCGWHPDRKWIFSGAN 338
++W+ L +CG + +VR W + S C V + V W P ++ S +
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 339 DKSICMWELGGKELECWKGQRTLKISDLEVTS-----DGKQIITMCKESALLLLDREAKV 393
D + C+W+ + EC TL+ + EV S G + T ++ ++ + + +
Sbjct: 82 DATTCIWKKNKDDFEC---VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVEN 138
Query: 394 E-----RYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLV-AKYKGHKRSRF 447
+ R + Q++ + L + + L+ E + + A +GH+ + +
Sbjct: 139 QPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVW 198
Query: 448 VIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPA 499
+ F Q +AS S+D V IW + LPG+ V C +P+
Sbjct: 199 SL--AFDPSGQR-LASCSDDRTVRIWRQY-------LPGNEQGVACNGSDPS 240
Score = 41 (19.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 457 EQAFIASGSEDSQVYIW 473
EQ +AS S+D ++ W
Sbjct: 315 EQGLLASCSDDGELAFW 331
>WB|WBGene00017178 [details] [associations]
symbol:atg-16.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:FO081068 PIR:T15958
RefSeq:NP_508768.1 ProteinModelPortal:Q19124 SMR:Q19124
PaxDb:Q19124 EnsemblMetazoa:F02E8.5 GeneID:180717
KEGG:cel:CELE_F02E8.5 CTD:180717 WormBase:F02E8.5 eggNOG:COG2319
GeneTree:ENSGT00700000104505 HOGENOM:HOG000016928 InParanoid:Q19124
OMA:STRDDTI NextBio:910606 InterPro:IPR020472 PRINTS:PR00320
Uniprot:Q19124
Length = 578
Score = 184 (69.8 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 72/311 (23%), Positives = 138/311 (44%)
Query: 217 DQIPSRT---LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLS 273
D +PSR L+ +G ++V +L +G+ A+ +DR+ IW+VD +GG T L+
Sbjct: 278 DSVPSRAEFVLECEEGEVNDVHWL----DGETFATGGSDRNIKIWKVDGHGGYTRIGTLA 333
Query: 274 GHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWI 333
G + + + D + + ++ VR W++ + L V+C
Sbjct: 334 GSNAAFTRIDYERDRKHFIASSNDKNVRIWNLDNSRLLSTLSGHS-DQVTCVKFYQSHSA 392
Query: 334 FSGANDKSICMWELGGKELECWKGQ-RTLKISDLEVTSDGKQIITMCK---ESALLLLD- 388
SG+ D+ I +W++ + C + K+ D+ T+ G + L D
Sbjct: 393 VSGSADRVIKIWDIQNQR--CSRSLFPASKVLDV-ATNMGASPSLFASGHFDKKLRFYDG 449
Query: 389 REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKY--KGHKRSR 446
R R ++ ITS ++ LLV+ + I L ++ + V Y + ++ S
Sbjct: 450 RSTDPVRTVDMGGRITSLDVTMSGCELLVSTRDDTISLIDLR-TFQTVHCYSAENYRTSS 508
Query: 447 FVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHS-GAVNCVSWNPANPHMLA 505
+ R + ++A+GS + +++W+R S L L +S A+ +SWNP + L
Sbjct: 509 DLSRVVLSSGNE-YVAAGSSNGSIFVWNRNSTKLEKQLCSNSENAIFSLSWNPTG-YGLL 566
Query: 506 SASDDRTIRIW 516
S+S + + +W
Sbjct: 567 SSSKQKFVTLW 577
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 184 (69.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 80/298 (26%), Positives = 129/298 (43%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GHT VW Q S G+Y+ S S DR+ +W ++G +L H L GH V C++ +
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST-VDG--SLLHTLQGHTSTVRCMAMAG 348
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
L+T + +R WDV SG LH + A V C D + SG D ++
Sbjct: 349 SI--LVTGSRDTTLRVWDVESGRHLATLHGHHAA----VRCVQF-DGTTVVSGGYDFTVK 401
Query: 344 MWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REAKVE--RYIE 398
+W G+ + G ++ L S+ + + ++++ + D R E ++
Sbjct: 402 IWNAHTGRCIRTLTGHNN-RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQ 458
++TS R N + N + + +W+I E V GH RS FG +
Sbjct: 461 GHTSLTSGMQLRGNILVSCNA-DSHVRVWDIH-EGTCVHMLSGH-RSAITSLQWFG---R 514
Query: 459 AFIASGSEDSQVYIW--HRASC--DLIGALPGHSGAVNCVSWNPANPH-MLASASDDR 511
+A+ S+D V +W R + DL+ G +G C+ W + MLA A R
Sbjct: 515 NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGG--CI-WRLCSTSTMLACAVGSR 569
Score = 183 (69.5 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 74/344 (21%), Positives = 143/344 (41%)
Query: 185 VEQALVLQREACMFHNSSDRDMSLYTDH-QCGRDQIPSRTLQILQGHTDEVWFLQFSHNG 243
V + L LQ+ +F ++D+ L D + + P +L+GH D V H+
Sbjct: 208 VHRFLKLQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD 267
Query: 244 KYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW 303
L + S+D + +W +D G V + L GH V S + +++ + V+ W
Sbjct: 268 -VLVTGSDDNTLKVWCID-KGEVM--YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVW 323
Query: 304 DVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLK 362
G+ LH + V C + +G+ D ++ +W++ G+ L G
Sbjct: 324 STVDGSLLHTLQ-GHTSTVRC-MAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAV 381
Query: 363 ISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLL 420
V DG +++ + + + + + + + S + + L
Sbjct: 382 RC---VQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSL 438
Query: 421 NQEIHLWNI---EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW--HR 475
+ I +W+ EG+ + VA +GH ++ L + S + DS V +W H
Sbjct: 439 DTSIRVWDFTRPEGQ-ECVALLQGHTSLTSGMQ-----LRGNILVSCNADSHVRVWDIHE 492
Query: 476 ASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
+C + L GH A+ + W N M+A++SDD T+++W ++
Sbjct: 493 GTC--VHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIE 532
Score = 137 (53.3 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 38/164 (23%), Positives = 69/164 (42%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R ++ L GH + V+ L F + S S D S +W+ G L GH S
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG 468
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
+ + L++C + VR WD+ G C+H+ + S W R + + ++D +
Sbjct: 469 MQLRGNI--LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGT 525
Query: 342 ICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALL 385
+ +W++ +G + L+ +G I +C S +L
Sbjct: 526 VKLWDIE-------RGALIRDLVTLDSGGNGGCIWRLCSTSTML 562
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 184 (69.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 80/298 (26%), Positives = 129/298 (43%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GHT VW Q S G+Y+ S S DR+ +W ++G +L H L GH V C++ +
Sbjct: 292 LVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWST-VDG--SLLHTLQGHTSTVRCMAMAG 348
Query: 287 DDQQLLTCGVEEAVRRWDVSSGN---CLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSIC 343
L+T + +R WDV SG LH + A V C D + SG D ++
Sbjct: 349 SI--LVTGSRDTTLRVWDVESGRHLATLHGHHAA----VRCVQF-DGTTVVSGGYDFTVK 401
Query: 344 MWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD--REAKVE--RYIE 398
+W G+ + G ++ L S+ + + ++++ + D R E ++
Sbjct: 402 IWNAHTGRCIRTLTGHNN-RVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 399 EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQ 458
++TS R N + N + + +W+I E V GH RS FG +
Sbjct: 461 GHTSLTSGMQLRGNILVSCNA-DSHVRVWDIH-EGTCVHMLSGH-RSAITSLQWFG---R 514
Query: 459 AFIASGSEDSQVYIW--HRASC--DLIGALPGHSGAVNCVSWNPANPH-MLASASDDR 511
+A+ S+D V +W R + DL+ G +G C+ W + MLA A R
Sbjct: 515 NMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGG--CI-WRLCSTSTMLACAVGSR 569
Score = 183 (69.5 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 74/344 (21%), Positives = 143/344 (41%)
Query: 185 VEQALVLQREACMFHNSSDRDMSLYTDH-QCGRDQIPSRTLQILQGHTDEVWFLQFSHNG 243
V + L LQ+ +F ++D+ L D + + P +L+GH D V H+
Sbjct: 208 VHRFLKLQKFGDIFERAADKSRYLRADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDD 267
Query: 244 KYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRW 303
L + S+D + +W +D G V + L GH V S + +++ + V+ W
Sbjct: 268 -VLVTGSDDNTLKVWCID-KGEVM--YTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVW 323
Query: 304 DVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL-GGKELECWKGQRTLK 362
G+ LH + V C + +G+ D ++ +W++ G+ L G
Sbjct: 324 STVDGSLLHTLQ-GHTSTVRC-MAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAV 381
Query: 363 ISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITSFSLSRDNKFLLVNLL 420
V DG +++ + + + + + + + S + + L
Sbjct: 382 RC---VQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSL 438
Query: 421 NQEIHLWNI---EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIW--HR 475
+ I +W+ EG+ + VA +GH ++ L + S + DS V +W H
Sbjct: 439 DTSIRVWDFTRPEGQ-ECVALLQGHTSLTSGMQ-----LRGNILVSCNADSHVRVWDIHE 492
Query: 476 ASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
+C + L GH A+ + W N M+A++SDD T+++W ++
Sbjct: 493 GTC--VHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIE 532
Score = 137 (53.3 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 38/164 (23%), Positives = 69/164 (42%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
R ++ L GH + V+ L F + S S D S +W+ G L GH S
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSG 468
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKS 341
+ + L++C + VR WD+ G C+H+ + S W R + + ++D +
Sbjct: 469 MQLRGNI--LVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGT 525
Query: 342 ICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALL 385
+ +W++ +G + L+ +G I +C S +L
Sbjct: 526 VKLWDIE-------RGALIRDLVTLDSGGNGGCIWRLCSTSTML 562
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 181 (68.8 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 57/291 (19%), Positives = 124/291 (42%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSD 287
+GH D + + FS N K LAS S D ++W + ++ +GH+ V+CV++S
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRA---YRFAGHKDAVTCVNFSPS 72
Query: 288 DQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWEL 347
L + ++ VR W + V+ + S + D + + + ++DK++ +W
Sbjct: 73 GHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAK--VERYIEEDQTITS 405
++ Q + + DG+ I++ + + L D+ ++ V Y E +T
Sbjct: 133 HRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY 192
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
+ ++ + +W++ +L+ Y+ H + + G ++ + S
Sbjct: 193 VDFHPSGTCIAAASMDNTVKVWDVRTH-RLLQHYQLHSAAVNALSFHPSG---NYLLTAS 248
Query: 466 EDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
DS + I L+ L GH G V+++ + + SD++ + +W
Sbjct: 249 SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ-VMVW 298
Score = 173 (66.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 59/256 (23%), Positives = 113/256 (44%)
Query: 229 GHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDD 288
GH D V + FS +G LAS S D++ IW ++ G T+ H V V + SD
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTV---FRAHTATVRSVHFCSDG 115
Query: 289 QQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG-WHPDRKWIFSGANDKSICMWEL 347
Q L+T ++ V+ W L + + V C + PD + I S ++DK++ +W+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQH-INWVRCARFSPDGRLIVSASDDKTVKLWDK 174
Query: 348 GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKV-ERYIEEDQTITS 405
+E + ++ ++ G I ++ + + D R ++ + Y + +
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 406 FSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGS 465
S +LL + + + ++ E +L+ GH+ + F + F ASG
Sbjct: 235 LSFHPSGNYLLTASSDSTLKILDLM-EGRLLYTLHGHQGPATTV--AFSRTGEYF-ASGG 290
Query: 466 EDSQVYIWHRASCDLI 481
D QV +W +++ D++
Sbjct: 291 SDEQVMVW-KSNFDVV 305
Score = 167 (63.8 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 46/211 (21%), Positives = 97/211 (45%)
Query: 226 ILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS 285
+ + HT V + F +G+ L ++S+D++ +W LS H V C +S
Sbjct: 98 VFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQ---KFLFSLSQHINWVRCARFS 154
Query: 286 SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKWIFSGANDKSICM 344
D + +++ ++ V+ WD +S C+H Y + G G V+ +HP I + + D ++ +
Sbjct: 155 PDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG-GFVTYVDFHPSGTCIAAASMDNTVKV 213
Query: 345 WELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQ-T 402
W++ L + ++ L G ++T +S L +LD E ++ + Q
Sbjct: 214 WDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGP 273
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNIEGEV 433
T+ + SR ++ ++++ +W +V
Sbjct: 274 ATTVAFSRTGEYFASGGSDEQVMVWKSNFDV 304
Score = 153 (58.9 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 58/259 (22%), Positives = 116/259 (44%)
Query: 267 TLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSC- 324
+L+ GH+ ++ V +S + +QL + ++ + W + + Y AG V+C
Sbjct: 10 SLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQS--RAYRFAGHKDAVTCV 67
Query: 325 GWHPDRKWIFSGANDKSICMWELGGK-ELECWKGQRTLKISDLEVTSDGKQIITMCKESA 383
+ P + SG+ DK++ +W K E ++ T + + SDG+ ++T +
Sbjct: 68 NFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAH-TATVRSVHFCSDGQSLVTASDDKT 126
Query: 384 LLLLD--REAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKG 441
+ + R+ + + + S D + ++ ++ + LW+ + V Y
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSR-ECVHSYCE 185
Query: 442 HKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANP 501
H FV F IA+ S D+ V +W + L+ HS AVN +S++P+
Sbjct: 186 H--GGFVTYVDFHP-SGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGN 242
Query: 502 HMLASASDDRTIRIWGLKD 520
++L +AS D T++I L +
Sbjct: 243 YLL-TASSDSTLKILDLME 260
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 39/105 (37%), Positives = 55/105 (52%)
Query: 439 YKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNP 498
+KGH R I S L +ASGS DS + +WH GH AV CV+++P
Sbjct: 15 FKGH---RDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSP 71
Query: 499 ANPHMLASASDDRTIRIW--GLK-DLNVKRKDCHS-NGVHYCNGG 539
+ H+LAS S D+T+RIW +K + V R + VH+C+ G
Sbjct: 72 SG-HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 195 (73.7 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 66/299 (22%), Positives = 139/299 (46%)
Query: 222 RTLQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSC 281
+ + +Q + V + F N K L + D + ++ D+N + ++GH+K +
Sbjct: 860 KCVSTIQSFRERVNSIAFFDNQKLLCAGYGDGTYRVF--DVNDNWKCLYTVNGHRKSIES 917
Query: 282 VSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAG-LGLVSCGWHPDRKWIFSGANDK 340
++ +S+ + T + ++ + SGN + G G V+C + K++FS + DK
Sbjct: 918 IACNSN--YIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVV-ANEKYLFSCSYDK 974
Query: 341 SICMWELGG-KELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEE 399
+I +W+L KE++ ++G T I L ++ G+ + + + + + D E + +
Sbjct: 975 TIKVWDLSTFKEIKSFEGVHTKYIKTLALS--GRYLFSGGNDQIIYVWDTETLSMLFNMQ 1032
Query: 400 DQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQA 459
SL +L + I +W++ + KGH S + SC ++
Sbjct: 1033 GHEDWVLSLHCTASYLFSTSKDNVIKIWDLSN-FSCIDTLKGHWNS---VSSCV--VKDR 1086
Query: 460 FIASGSEDSQVYIWHRASCDLIGALP-GHSGAVNCVS-WNPANPHMLASASDDRTIRIW 516
++ SGSED+ + +W + + + +P HS V C+ +N + + SA+ D +I++W
Sbjct: 1087 YLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFN----NQIISAAFDGSIKVW 1141
Score = 122 (48.0 bits), Expect = 0.00088, P = 0.00088
Identities = 48/145 (33%), Positives = 67/145 (46%)
Query: 215 GRDQI----PSRTLQIL---QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVT 267
G DQI + TL +L QGH D W L YL S+S D IW DL+
Sbjct: 1012 GNDQIIYVWDTETLSMLFNMQGHED--WVLSLHCTASYLFSTSKDNVIKIW--DLSNFSC 1067
Query: 268 LKHKLSGHQKPVS-CVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKA-GLGLVSCG 325
+ L GH VS CV D+ L + + +++ WD+ + C++ K+ LG V C
Sbjct: 1068 ID-TLKGHWNSVSSCVV---KDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLG-VKCL 1122
Query: 326 WHPDRKWIFSGANDKSICMWELGGK 350
+ + I S A D SI +WE K
Sbjct: 1123 MVFNNQ-IISAAFDGSIKVWEWQSK 1146
Score = 41 (19.5 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 8/29 (27%), Positives = 19/29 (65%)
Query: 206 MSLYTDHQCGRDQIPSRTLQILQGHTDEV 234
M+ +T+ DQ+ +T+++++ HTD +
Sbjct: 95 MAHFTEQM--EDQL-EKTMKVVRNHTDSL 120
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 188 (71.2 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 68/304 (22%), Positives = 139/304 (45%)
Query: 186 EQALVLQREACMFHNSSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEVWFLQFSHNGKY 245
E + V Q+ D M LY + + I + + +++ HTD V+ FS +G+
Sbjct: 580 ETSEVYQQAKLQAKQEVDHGM-LYLEW-INKKNIKNLSRLVVRPHTDAVYHACFSEDGQR 637
Query: 246 LASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDV 305
+AS D++ +++ + G L+ K H+ V C ++S+DD+ + TC V++ V+ W+
Sbjct: 638 IASCGVDKTLQVFKAE-TGEKLLEIK--AHEDEVLCCAFSTDDRFIATCSVDKKVKIWNS 694
Query: 306 SSGNCLHVYEKAGLGLVSCGWHPDRKWIF--SGANDKSICMWELGGKELECWKGQRTLKI 363
+G +HVY++ + C + + ++ + ++D + +W+L KE T +
Sbjct: 695 MTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSV 754
Query: 364 SDLEVTSDGKQIITMCKESALLLLD-REAKVERYIEEDQTITSFSLSRDNKFLLVNLLN- 421
+ + D K + + + L L D + A + I Q + +++ ++V +
Sbjct: 755 NHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEEPQEDMEVIVKCCSW 814
Query: 422 ------------QEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQ 469
+I LWN++ +K VA +GH +V F +F+ S S+D
Sbjct: 815 SADGTRIMVAAKNKIFLWNMDSCLK-VADCRGHLS--WVHCVMFSPDGSSFLTS-SDDQT 870
Query: 470 VYIW 473
+ +W
Sbjct: 871 IRLW 874
Score = 161 (61.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 63/299 (21%), Positives = 133/299 (44%)
Query: 228 QGHTDEVWFLQFSHNGKYLASSSNDRSAIIWE---VDLNGGVTLKHKLSGHQKPVSCVSW 284
+GH V + FS +G +SS+D++ +WE V N + LK ++ V +
Sbjct: 844 RGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQEID--------VVF 895
Query: 285 SSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICM 344
++ +L + ++R + +G + + C P ++I G D ++ +
Sbjct: 896 QENEVMVLAV---DNIKRLQLINGKTGQIDYLIEAQVSCCCLSPHLQYIAFGGEDGAVEI 952
Query: 345 WEL-GGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-T 402
EL + + G + + ++ T DGK +I+ +S++ + + +++ +++ Q T
Sbjct: 953 LELLNNRIFQSRIGHKKT-VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQET 1011
Query: 403 ITSFSLSRDNKFLLVNLLNQEIHLWNI-EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFI 461
+ F L +++K L + +W+I G ++ + H+ + + SC +
Sbjct: 1012 VKDFKLLKNSKLLSWSFDGTVKKIWSIITGRIE--KDFVCHQDT---VLSCDISPDATKF 1066
Query: 462 ASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLKD 520
+S S D IW + L GH G V C ++ + +LA+ D+ IRIW + +
Sbjct: 1067 SSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFS-VDSTLLATGDDNGEIRIWNVSN 1124
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 183 (69.5 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 79/327 (24%), Positives = 129/327 (39%)
Query: 201 SSDRDMSLYTDHQCGRDQIPSRTLQILQGHTDEV----WF-LQFSHNGK-YLASSSNDRS 254
S D+ + ++ D + G+ Q+ S L+GH V W L +G L S+S D +
Sbjct: 214 SMDKTVRIW-DPETGK-QVGSE----LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFT 267
Query: 255 AIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQ--LLTCGVEEAVRRWDVSSGNCLH 312
A IW V N G T +H LSGH+ VSCV W + + + T ++ V+ WD G LH
Sbjct: 268 ARIWTV--NTGRT-EHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLH 324
Query: 313 VYEKAGLGLVSCGWHPD---RKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVT 369
+ + D R F E K E ++ + +E
Sbjct: 325 DLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARVGGKIVERL 384
Query: 370 SDGKQIITMCKESALLLLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLWNI 429
TM L D + R I + + + S D + + LWN
Sbjct: 385 VSASDDFTMYLFDPLN--DGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNA 442
Query: 430 EGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSG 489
+ K + +GH + C + + + S+D+ + +W+ + L LPGH
Sbjct: 443 R-DGKFINTLRGHVAP---VYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHED 498
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIW 516
V V W+P + + S D+ +R+W
Sbjct: 499 EVYGVDWSP-DGQRVGSGGRDKAVRLW 524
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 74/309 (23%), Positives = 139/309 (44%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWS- 285
L+GH V + +S +G LA+ S D++ IW+ + G + +L GH K V ++W
Sbjct: 191 LKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPET--GKQVGSELKGHAKWVQGIAWEP 248
Query: 286 -----SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSC-GWHPDRKW--IFSGA 337
+L++ + R W V++G HV G VSC W +++ +
Sbjct: 249 LHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLS-GHKGSVSCVRWGAGNGTGVVYTAS 307
Query: 338 NDKSICMWE-LGGKELECWKGQRTLKISDLEVTSD---GKQIITMCKESALLLLDREAKV 393
+DK++ +W+ + G L K ++ L +++D K ++ AK
Sbjct: 308 HDKTVKVWDAVKGTLLHDLKSHAHW-VNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKA 366
Query: 394 -ERYIEEDQTITSFSLSRDNKFLLVNLLNQ-EIHLWN-IEGEVKLVAKYKGHKRSRFVIR 450
ERY E+ + + R LV+ + ++L++ + K +A+ GH++ V
Sbjct: 367 KERY-EKAARVGGKIVER-----LVSASDDFTMYLFDPLNDGTKPIARMIGHQKQ--VNH 418
Query: 451 SCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDD 510
F + + IAS D+ +W+ I L GH V S++ A+ +L +AS D
Sbjct: 419 VTFSP-DGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFS-ADSRLLVTASKD 476
Query: 511 RTIRIWGLK 519
T+++W ++
Sbjct: 477 TTLKVWNVR 485
Score = 150 (57.9 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 40/117 (34%), Positives = 54/117 (46%)
Query: 218 QIPSRTLQILQGHTDEVWFLQFSH-NGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQ 276
Q SR + GH + + QFS + LA+ S D +A IW+ + T KH L GH
Sbjct: 139 QAVSRLAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETG---TPKHTLKGHA 195
Query: 277 KPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVS-CGWHPDRKW 332
V VSWS D +L TC +++ VR WD +G + K V W P W
Sbjct: 196 GWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLW 252
Score = 105 (42.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 268 LKHKLSGHQKPVSCVSWS-SDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGW 326
L H++ GH +P+ C +S + +L T + R WD +G H + ++ W
Sbjct: 144 LAHRIPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSW 203
Query: 327 HPDRKWIFSGANDKSICMWE 346
PD + + + DK++ +W+
Sbjct: 204 SPDGTRLATCSMDKTVRIWD 223
Score = 78 (32.5 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 30/111 (27%), Positives = 52/111 (46%)
Query: 433 VKLVAKYKGHK-RSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDL--IGALPGHSG 489
V A+ K K + R+ + GG + S S+D +Y++ + I + GH
Sbjct: 355 VPATAEEKTAKAKERYEKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQK 414
Query: 490 AVNCVSWNPANPHMLASASDDRTIRIWGLKD---LNVKRKDCHSNGVHYCN 537
VN V+++P + M+ASA D ++W +D +N R H V+ C+
Sbjct: 415 QVNHVTFSP-DGSMIASAGWDNATKLWNARDGKFINTLRG--HVAPVYQCS 462
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 129 (50.5 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 41/192 (21%), Positives = 78/192 (40%)
Query: 227 LQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSS 286
L GH V + F + S+S D + +W+ + + L GH V +S+
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD---FERTLKGHTDSVQDISFDH 160
Query: 287 DDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
+ L +C + ++ WD C+ + S P+ I S A DK+I MWE
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 347 LG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESAL---LLLDREAKVERYIEEDQT 402
+ G ++ + G R + + DG I + + + ++ +E K E E +
Sbjct: 221 VQTGYCVKTFTGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHEHV 278
Query: 403 ITSFSLSRDNKF 414
+ S + ++ +
Sbjct: 279 VECISWAPESSY 290
Score = 123 (48.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 42/191 (21%), Positives = 83/191 (43%)
Query: 326 WHPDRKWIFSGANDKSICMWELGGKELE-CWKGQRTLKISDLEVTSDGKQIITMCKESAL 384
+HP + S + D +I +W+ + E KG T + D+ GK + + + +
Sbjct: 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGH-TDSVQDISFDHSGKLLASCSADMTI 174
Query: 385 LLLDREA-KVERYIE-EDQTITSFSLSRDNKFLLVNLLNQEIHLWNIEGEVKLVAKYKGH 442
L D + + R + D ++S ++ + ++ ++ I +W ++ V + GH
Sbjct: 175 KLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY-CVKTFTGH 233
Query: 443 KRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPH 502
+ ++R G IAS S D V +W A+ + L H V C+SW P + +
Sbjct: 234 REWVRMVRPNQDG---TLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Query: 503 M-LASASDDRT 512
++ A+ T
Sbjct: 291 SSISEATGSET 301
Score = 118 (46.6 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 27/104 (25%), Positives = 53/104 (50%)
Query: 243 GKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRR 302
G +L S S D++ +W D++ G+ L L GH V V + S + +L+C ++ +R
Sbjct: 308 GPFLLSGSRDKTIKMW--DVSTGMCLM-TLVGHDNWVRGVLFHSGGKFILSCADDKTLRV 364
Query: 303 WDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWE 346
WD + C+ + S +H ++ +G+ D+++ +WE
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 107 (42.7 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 29/113 (25%), Positives = 55/113 (48%)
Query: 224 LQILQGHTDEVWFLQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVS 283
++ + GH V + NG ++ S++ D++ +WEV G +K +GH++ V V
Sbjct: 185 IRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQT--GYCVK-TFTGHREWVRMVR 241
Query: 284 WSSDDQQLLTCGVEEAVRRWDVSSGNC---LHVYEKAGLGLVSC-GWHPDRKW 332
+ D + +C ++ VR W V++ C L +E +V C W P+ +
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH----VVECISWAPESSY 290
Score = 92 (37.4 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 460 FIASGSEDSQVYIWHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIWGLK 519
F+ SGS D + +W ++ + L GH V V ++ +L S +DD+T+R+W K
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYK 368
Query: 520 DLN-VKRKDCHSNGV 533
+ +K + H + V
Sbjct: 369 NKRCMKTLNAHEHFV 383
Score = 82 (33.9 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 26/162 (16%), Positives = 69/162 (42%)
Query: 269 KHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHP 328
K+ LSGH+ PV+ V + +++ + ++ WD +G+ + + +
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160
Query: 329 DRKWIFSGANDKSICMWELGGKE-LECWKGQRTLKISDLEVTSDGKQIITMCKESALLLL 387
K + S + D +I +W+ G E + G +S + + +G I++ ++ + +
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDH-NVSSVAIMPNGDHIVSAARDKTIKMW 219
Query: 388 DREAK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLW 427
+ + V+ + + + ++D + +Q + +W
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
Score = 75 (31.5 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 25/104 (24%), Positives = 50/104 (48%)
Query: 414 FLLVNLLNQEIHLWNIEGEVKLVAKYKGHKR-SRFVIRSCFGGLEQAFIASGSEDSQVYI 472
FLL ++ I +W++ + L+ GH R V+ GG FI S ++D + +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLV-GHDNWVRGVLFHS-GG---KFILSCADDKTLRV 364
Query: 473 WHRASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
W + + L H V + ++ P+++ + S D+T+++W
Sbjct: 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 21/99 (21%), Positives = 46/99 (46%)
Query: 332 WIFSGANDKSICMWELG-GKELECWKGQRTLKISDLEVTSDGKQIITMCKESALLLLDRE 390
++ SG+ DK+I MW++ G L G + + S GK I++ + L + D +
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW-VRGVLFHSGGKFILSCADDKTLRVWDYK 368
Query: 391 AK--VERYIEEDQTITSFSLSRDNKFLLVNLLNQEIHLW 427
K ++ + +TS + +++ ++Q + +W
Sbjct: 369 NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
Score = 45 (20.9 bits), Expect = 6.6e-11, Sum P(3) = 6.6e-11
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 21 KRVEFVRIIAKALYSLGYTKSGAHLEEESGIPLHSSMVNLFTQQILDGHWDESLATLSKI 80
+R E R IA L S GY ++ + ++E+ + ++ + + +L+ W S+ L K
Sbjct: 7 QRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAG-LLEKKWT-SVIRLQKK 64
Query: 81 GLVDESVVKSA 91
+ ES + A
Sbjct: 65 VMELESKLNEA 75
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 178 (67.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 66/281 (23%), Positives = 130/281 (46%)
Query: 237 LQFSHNGKYLASSSNDRSAIIWEVDLNGGVTLKHKLSGHQKPVSCVSWSSDDQQLLTCGV 296
+ FS +G++L +++ D +W + G L +L G + P+ S D Q L+T G
Sbjct: 55 IHFSPDGQFLLTAAADGVGTLWTKE---GEMLG-QLQGQKPPMFNARLSPDRQILITTGY 110
Query: 297 EEAVRRWDVSSGNCLHVYEKAGLGLVSCGWHPDRKWIFSGANDKSICMWELGGKELECWK 356
+ +R W++ G L + + + PD + I + ++D ++ G+E+
Sbjct: 111 DGTIRLWNLQ-GELLEEQQPHRAAVADAIFSPDSQIIVTCSDDGQTKIFTRQGQEIASVL 169
Query: 357 GQRTLKISDLEVTSDGKQIITMCKESALLLLDREAKVERYIEEDQ-TITSFSLSRDNKFL 415
T + +L G I ++ +L L++ K+ER I Q I + + S + + L
Sbjct: 170 KSGTAR--NLAYHPQGLLIASVSDSGSLHLINPNGKIEREISTGQGRINNVNFSPNGEQL 227
Query: 416 LVNLLNQEIHLWNIEGEVKLVAKYKGHKRSRFVIRSCFGGLEQAFIASGSEDSQVYIWHR 475
L + +N LWN+ GE L+ +YK +V + F + ++A+ S+D + W +
Sbjct: 228 LTSGINGSAKLWNLAGE--LIHEYKVVPTG-WVNSAQFYPKGE-WLATASDDGTIRFWQK 283
Query: 476 ASCDLIGALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 516
LI LP + + +S++P + A++S + +W
Sbjct: 284 DG-QLIYELPLVNARLTSLSFSPDGKQLAATSSQGQ---VW 320
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 62/255 (24%), Positives = 110/255 (43%)
Query: 266 VTLKHKLSGHQKPVSCVSWSSDDQQLLTCGVEEAVRRWDVSSGNCLHVYEKAGLGLVSCG 325
+ L+ + +G ++ + +S D Q LLT + W G L + + +
Sbjct: 39 LNLERQFTGSDVAINRIHFSPDGQFLLTAAADGVGTLW-TKEGEMLGQLQGQKPPMFNAR 97
Query: 326 WHPDRKWIFSGANDKSICMWELGGKELECWKGQRTLKISDLEVTSDGKQIITMCKESALL 385
PDR+ + + D +I +W L G+ LE + R ++D + D + I+T +
Sbjct: 98 LSPDRQILITTGYDGTIRLWNLQGELLEEQQPHRAA-VADAIFSPDSQIIVTCSDDGQTK 156
Query: 386 LLDREAKVERYIEEDQTITSFSLSRDNKFLLVNLLNQ-EIHLWNIEGEVKLVAKYKGHKR 444
+ R+ + + + T + + L+ ++ + +HL N G+++ G R
Sbjct: 157 IFTRQGQEIASVLKSGTARNLAYHPQG-LLIASVSDSGSLHLINPNGKIEREIS-TGQGR 214
Query: 445 SRFVIRSCFGGLEQAFIASGSEDSQVYIWHRASCDLIG---ALPGHSGAVNCVSWNPANP 501
V S G EQ + SG S +W+ A +LI +P +G VN + P
Sbjct: 215 INNVNFSPNG--EQ-LLTSGINGS-AKLWNLAG-ELIHEYKVVP--TGWVNSAQFYPKG- 266
Query: 502 HMLASASDDRTIRIW 516
LA+ASDD TIR W
Sbjct: 267 EWLATASDDGTIRFW 281
WARNING: HSPs involving 1024 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 540 510 0.00087 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1274
No. of states in DFA: 625 (66 KB)
Total size of DFA: 335 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.28u 0.21s 41.49t Elapsed: 00:00:01
Total cpu time: 41.39u 0.21s 41.60t Elapsed: 00:00:02
Start: Tue May 21 07:48:53 2013 End: Tue May 21 07:48:55 2013
WARNINGS ISSUED: 2