Query 009190
Match_columns 540
No_of_seqs 207 out of 1633
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 20:51:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009190.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009190hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w26_A Trigger factor, TF; cha 100.0 6.2E-77 2.1E-81 636.5 40.0 413 90-539 1-421 (432)
2 1t11_A Trigger factor, TF; hel 100.0 7.7E-74 2.6E-78 605.2 31.8 375 88-500 2-381 (392)
3 3gty_X Trigger factor, TF; cha 100.0 1.2E-71 4.3E-76 595.4 37.0 406 90-539 1-411 (433)
4 1p9y_A Trigger factor, TF; alp 100.0 1.1E-28 3.7E-33 218.8 14.3 119 89-215 3-121 (121)
5 2d3o_1 Trigger factor, TF; rib 99.9 3.7E-27 1.3E-31 206.1 7.3 112 90-210 1-112 (112)
6 2nsc_A Trigger factor, TF; cha 99.9 4.4E-26 1.5E-30 198.4 8.5 109 90-210 1-109 (109)
7 2nsa_A Trigger factor, TF; cha 99.8 1.5E-20 5E-25 176.1 10.9 158 369-534 2-164 (170)
8 1zxj_A MPN555, hypothetical pr 99.8 1.7E-19 5.9E-24 173.9 10.2 149 366-537 51-210 (218)
9 1hxv_A Trigger factor; FKBP fo 99.8 7.5E-19 2.6E-23 153.7 8.4 100 245-351 14-113 (113)
10 2pbc_A FK506-binding protein 2 99.4 5.7E-13 1.9E-17 113.8 9.6 90 258-353 3-99 (102)
11 1r9h_A FKB-6, FK506 binding pr 99.3 3.6E-12 1.2E-16 114.6 9.4 96 260-361 29-131 (135)
12 2vn1_A 70 kDa peptidylprolyl i 99.3 7.2E-12 2.5E-16 111.7 9.8 91 258-353 31-128 (129)
13 2k8i_A SLYD, peptidyl-prolyl C 99.3 9.9E-12 3.4E-16 116.1 9.5 94 261-364 3-149 (171)
14 1yat_A FK506 binding protein; 99.3 1.7E-11 6E-16 106.5 10.4 87 259-351 19-113 (113)
15 2y78_A Peptidyl-prolyl CIS-tra 99.2 2.8E-11 9.7E-16 108.5 10.0 87 258-350 40-133 (133)
16 2ppn_A FK506-binding protein 1 99.2 2.3E-11 7.8E-16 104.6 8.7 85 261-351 16-107 (107)
17 1jvw_A Macrophage infectivity 99.2 3.9E-11 1.3E-15 111.7 10.1 104 261-386 53-163 (167)
18 2lgo_A FKBP; infectious diseas 99.2 4.3E-11 1.5E-15 106.9 10.0 84 261-350 40-130 (130)
19 2kr7_A FKBP-type peptidyl-prol 99.2 1E-10 3.4E-15 107.2 10.8 90 258-352 4-146 (151)
20 3pr9_A FKBP-type peptidyl-prol 99.1 1E-10 3.6E-15 107.6 8.4 84 261-351 2-149 (157)
21 3kz7_A FK506-binding protein 3 99.1 2.7E-10 9.2E-15 99.8 10.2 85 260-350 19-118 (119)
22 4dip_A Peptidyl-prolyl CIS-tra 99.1 2.3E-10 7.7E-15 101.3 9.5 90 258-352 26-123 (125)
23 4dt4_A FKBP-type 16 kDa peptid 99.1 1.9E-10 6.3E-15 107.1 9.0 88 260-353 24-166 (169)
24 2d9f_A FK506-binding protein 8 99.1 1.6E-10 5.5E-15 103.8 7.8 91 260-358 33-129 (135)
25 1u79_A FKBP-type peptidyl-prol 99.1 2.1E-10 7.2E-15 102.2 8.5 87 258-350 24-128 (129)
26 3b7x_A FK506-binding protein 6 99.1 2E-10 7E-15 103.0 7.4 88 259-351 39-133 (134)
27 3prb_A FKBP-type peptidyl-prol 99.1 1E-10 3.5E-15 114.0 5.7 93 261-360 2-158 (231)
28 2awg_A 38 kDa FK-506 binding p 99.1 4.3E-10 1.5E-14 98.5 9.1 84 260-351 29-117 (118)
29 3o5q_A Peptidyl-prolyl CIS-tra 99.1 4.8E-10 1.6E-14 99.7 9.5 87 260-352 34-127 (128)
30 3cgm_A SLYD, peptidyl-prolyl C 99.0 3.4E-10 1.2E-14 104.4 8.6 82 261-352 3-137 (158)
31 2kfw_A FKBP-type peptidyl-prol 99.0 3.7E-10 1.3E-14 107.5 9.1 86 261-352 3-141 (196)
32 3o5e_A Peptidyl-prolyl CIS-tra 99.0 7.8E-10 2.7E-14 100.4 10.1 87 260-352 50-143 (144)
33 1ix5_A FKBP; ppiase, isomerase 99.0 2.7E-10 9.2E-15 104.3 5.5 66 261-332 2-82 (151)
34 2f4e_A ATFKBP42; FKBP-like, al 99.0 1.1E-09 3.8E-14 103.2 9.6 92 258-354 61-162 (180)
35 1q6h_A FKBP-type peptidyl-prol 99.0 1.6E-09 5.4E-14 105.4 9.7 86 258-351 133-224 (224)
36 2jwx_A FKBP38NTD, FK506-bindin 99.0 2E-09 6.9E-14 99.1 9.6 87 260-354 59-151 (157)
37 1fd9_A Protein (macrophage inf 98.9 1.8E-09 6.2E-14 104.2 9.1 87 258-352 118-211 (213)
38 3uf8_A Ubiquitin-like protein 98.9 3.8E-09 1.3E-13 101.8 9.7 86 259-350 117-209 (209)
39 3jxv_A 70 kDa peptidyl-prolyl 98.9 3.5E-09 1.2E-13 110.2 9.9 88 259-352 258-355 (356)
40 3oe2_A Peptidyl-prolyl CIS-tra 98.9 7E-09 2.4E-13 100.3 9.8 85 259-352 130-219 (219)
41 1q1c_A FK506-binding protein 4 98.8 4.3E-09 1.5E-13 105.9 8.5 85 260-354 183-276 (280)
42 2if4_A ATFKBP42; FKBP-like, al 98.8 5.3E-09 1.8E-13 107.4 8.2 91 259-353 62-161 (338)
43 1q1c_A FK506-binding protein 4 98.8 1.8E-08 6.3E-13 101.3 10.6 90 261-356 67-163 (280)
44 1kt0_A FKBP51, 51 kDa FK506-bi 98.8 8.9E-09 3E-13 110.1 8.7 98 261-365 47-151 (457)
45 3jxv_A 70 kDa peptidyl-prolyl 98.5 4.5E-09 1.6E-13 109.3 -2.1 101 260-366 26-133 (356)
46 2lkn_A AH receptor-interacting 98.5 1.6E-07 5.4E-12 86.9 7.2 62 261-326 27-90 (165)
47 1p5q_A FKBP52, FK506-binding p 95.4 0.034 1.1E-06 56.2 8.4 84 260-352 40-131 (336)
48 3rgc_A Possible periplasmic pr 92.4 1.5 5.2E-05 42.2 13.0 109 372-497 13-127 (252)
49 1kt0_A FKBP51, 51 kDa FK506-bi 90.6 0.46 1.6E-05 50.0 7.7 84 260-352 161-252 (457)
50 1m5y_A SurviVal protein, survi 87.9 2.8 9.4E-05 43.2 11.1 98 390-500 49-148 (408)
51 3rgc_A Possible periplasmic pr 87.8 1.6 5.6E-05 42.0 8.8 72 462-533 30-110 (252)
52 3nrk_A LIC12922; NC domain, pa 86.9 4.3 0.00015 40.7 11.5 96 389-500 55-156 (325)
53 1m5y_A SurviVal protein, survi 83.7 7.1 0.00024 40.0 11.7 78 459-536 46-133 (408)
54 3nrk_A LIC12922; NC domain, pa 80.7 3.4 0.00011 41.5 7.6 74 459-535 53-137 (325)
55 1te7_A Hypothetical UPF0267 pr 75.3 12 0.0004 31.1 8.1 40 340-382 48-87 (103)
56 2f23_A Anti-cleavage anti-GREA 71.7 20 0.00067 32.0 9.3 32 307-351 124-155 (156)
57 2nsa_A Trigger factor, TF; cha 63.8 14 0.00047 33.1 6.7 68 469-536 30-108 (170)
58 1w26_A Trigger factor, TF; cha 52.3 78 0.0027 32.9 11.0 70 467-536 285-361 (432)
59 3bmb_A Regulator of nucleoside 52.2 18 0.0006 31.6 5.0 34 307-352 93-126 (136)
60 3rfw_A Cell-binding factor 2; 51.7 68 0.0023 30.3 9.7 37 462-500 71-107 (252)
61 1grj_A GREA protein; transcrip 48.0 17 0.00058 32.5 4.4 32 307-351 125-156 (158)
62 2p4v_A Transcription elongatio 47.1 20 0.00068 32.1 4.7 33 307-352 123-155 (158)
63 2pn0_A Prokaryotic transcripti 45.0 20 0.00068 31.5 4.2 34 307-352 96-129 (141)
64 3gty_X Trigger factor, TF; cha 41.6 1.2E+02 0.004 31.6 10.3 68 469-536 272-350 (433)
65 3rfw_A Cell-binding factor 2; 38.5 33 0.0011 32.5 5.1 79 302-412 171-251 (252)
66 1zxj_A MPN555, hypothetical pr 33.4 2.7E+02 0.0094 26.0 10.4 70 397-484 141-210 (218)
67 1t11_A Trigger factor, TF; hel 25.5 68 0.0023 32.9 5.1 86 451-536 265-364 (392)
68 1use_A VAsp, vasodilator-stimu 24.8 1.3E+02 0.0044 21.1 4.7 29 372-405 8-36 (45)
69 3u43_A Colicin-E2 immunity pro 24.0 53 0.0018 26.9 3.0 24 114-137 64-87 (94)
70 1nb0_A Hypothetical protein FL 23.9 3.1E+02 0.011 24.0 8.4 52 320-387 74-125 (147)
71 2l7y_A Putative endo-beta-N-ac 23.8 1.2E+02 0.004 25.0 5.1 35 302-350 50-84 (98)
72 1unk_A Colicin E7; immunity pr 22.2 68 0.0023 25.8 3.3 22 115-136 66-87 (87)
73 1gxg_A Colicin E8 immunity pro 21.8 67 0.0023 25.7 3.2 23 114-136 63-85 (85)
74 1fr2_A Colicin E9 immunity pro 21.6 60 0.002 26.1 2.9 23 114-136 64-86 (86)
75 1n08_A Putative riboflavin kin 20.9 3.8E+02 0.013 23.9 8.4 52 320-387 92-143 (163)
No 1
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=100.00 E-value=6.2e-77 Score=636.53 Aligned_cols=413 Identities=18% Similarity=0.315 Sum_probs=366.8
Q ss_pred ceEEEeecCCceeEEEEEEchhhHHHHHHHHHHHHHhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 009190 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (540)
Q Consensus 90 m~vt~~~~~~~~~~l~v~v~~~~v~~~~~k~l~~~~k~~~IpGFRkGKvP~~vi~k~~G~~~i~~e~~e~li~~~~~~ai 169 (540)
|+|+++++++++++|+|+||+++++.+++++|++++++++||||||||||++||+++||. +|+.++++++++++|.+|+
T Consensus 1 M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~vi~~~yG~-~v~~ea~~~~~~~~~~~ai 79 (432)
T 1w26_A 1 MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGA-SVRQDVLGDLMSRNFIDAI 79 (432)
T ss_dssp CEEECCBCSTTEEEEEEEECHHHHHHHHHHHHHHHHHHTTCGGGCCSSSCHHHHHHHHCT-TTHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCcEEEEEEEEcHHHHHHHHHHHHHHHhhhCCCCCcCCCCCCHHHHHHHHhH-HHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 7999999999999999999
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEEeecccccCCCCCCceeEEEEe----cchhhHHHHHHHHHHHH
Q 009190 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVE----IDNDTAAQQAAEEELRR 245 (540)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~f~v~~ev~Pevel~~~~~yk~i~v~~~----~dedid~~~~~e~~L~~ 245 (540)
++.+++|+++|. +. . ..+.++++|+|+++|+|+|+|+|+ +|++++|+++ ++++|++ .|.+
T Consensus 80 ~e~~l~~~~~P~-i~--~----~~~~~~~~~~f~~~~~v~Pev~l~---~y~~l~v~~~~~eVtde~Vd~------~l~~ 143 (432)
T 1w26_A 80 IKEKINPAGAPT-YV--P----GEYKLGEDFTYSVEFEVYPEVELQ---GLEAIEVEKPIVEVTDADVDG------MLDT 143 (432)
T ss_dssp HHSCCCEEEEEE-EE--E----CCCCTTSCEEEEEEEEECCCCCCC---CTTTCBCCEEECCCCHHHHHH------HHHH
T ss_pred HhcCCCCCCCCC-cc--c----cccCCCCcEEEEEEeccCCCeecC---CCCceEEEecCCCcCHHHHHH------HHHH
Confidence 999999998752 21 1 246778999999999999999996 8999998876 3566665 5778
Q ss_pred HHhhcCcccccccCCcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEe
Q 009190 246 RHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (540)
Q Consensus 246 ~~~~~~~~~~v~dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v 325 (540)
+++++++|.+ .+++++.||+|+|||+|+ .+|+.|+++...++.|.+|. +.++|||+++|+||++|++++|.+
T Consensus 144 l~~~~a~~~~-~~~~~~~gD~V~i~y~g~------~dG~~fd~~~~~~~~~~lG~-g~~ipgfee~L~G~k~Ge~~~v~v 215 (432)
T 1w26_A 144 LRKQQATWKE-KDGAVEAEDRVTIDFTGS------VDGEEFEGGKASDFVLAMGQ-GRMIPGFEDGIKGHKAGEEFTIDV 215 (432)
T ss_dssp HHHHTCEECC-CSSCCCTTCEEEECEEEE------SSSCBCSSCCCSSEEEETTS-CCSCTTHHHHSSSCCSSCEEEEEE
T ss_pred HHHhCCeeee-cCCCCCCCCEEEEEEEEe------eCCeEccCCCccceEEEeCC-CCcchHHHHHhCCCCCCCEEEEEE
Confidence 8888898886 488999999999999998 68999999989999999994 689999999999999999999999
Q ss_pred cCCCCcccccCCCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009190 326 AFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLY 405 (540)
Q Consensus 326 ~fPedy~~~~laGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire~l~~~~~~~~~~~~~~~il~~L~ 405 (540)
+||++|+..+++|+++.|+|+|++|+++++||||||||+.++++++|+++||+.||++|+++++.++++.++++++++|+
T Consensus 216 ~~~~~yg~~~lag~~~~F~V~v~~v~~~~lpeldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~l~ 295 (432)
T 1w26_A 216 TFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLV 295 (432)
T ss_dssp ECCTTCSCTTTSSCEEEEEEECCEECCEECCCCSHHHHTTTTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCCCCCCceEEEEEEEEEEeccCCCCcchHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988546999999999999999999999999999999999999
Q ss_pred HhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 009190 406 KMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQRENITNVIKQNLAVGDIFKRENLQFS 485 (540)
Q Consensus 406 e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~ee~~e~~~~~a~~~vK~~Lil~~Ia~~enI~Vs 485 (540)
++++|++|++||+++++++++++..++ .++|++. + +...+.++++|+++||++|||++||+++||+||
T Consensus 296 e~~~~~lP~~lv~~e~~~~~~~~~~~l-~~~g~~~--~---------~~~~e~~~~~Ae~~vk~~Lil~~Ia~~e~i~vt 363 (432)
T 1w26_A 296 KANDIDVPAALIDSEIDVLRRQAAQRF-GGNEKQA--L---------ELPRELFEEQAKRRVVVGLLLGEVIRTNELKAD 363 (432)
T ss_dssp HHCCCCCCHHHHHHHHHHHHHHHHTTT-TCCTTSS--T---------TSCGGGTHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHHHH-HhcCcch--h---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999988887 4556321 1 111334589999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh---h-hhccHHHHHHHHHHHHHHHHHHHHHHHhCeeeeec
Q 009190 486 TEDLVKEVENSIAELKQQ---K-QEYDEDRVREQVIDILEGAKVLEWLREHAEIQYIT 539 (540)
Q Consensus 486 eeEi~~ei~~~~~~~~~~---~-~~~~~~~~~~~i~~~l~~~Kvld~L~e~aki~e~~ 539 (540)
++|+++++.+++++|... . ..+.+.+....++..++++||++||+++|++++++
T Consensus 364 ~eev~~~i~~~a~~y~~~~~~~~~~~~~~~~~~~l~~~i~~~K~~~~l~~~a~v~~~~ 421 (432)
T 1w26_A 364 EERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKE 421 (432)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTSBCCEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCcccccC
Confidence 999999999988664310 0 11122334567888999999999999999998764
No 2
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=100.00 E-value=7.7e-74 Score=605.24 Aligned_cols=375 Identities=20% Similarity=0.344 Sum_probs=339.4
Q ss_pred CcceEEEeecCCceeEEEEEEchhhHHHHHHHHHHHHHhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHH
Q 009190 88 ADIEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPH 167 (540)
Q Consensus 88 ~~m~vt~~~~~~~~~~l~v~v~~~~v~~~~~k~l~~~~k~~~IpGFRkGKvP~~vi~k~~G~~~i~~e~~e~li~~~~~~ 167 (540)
..|+|+++++++++++|+|+||+++++++++++|++++++++||||||||||++||+++||. +|+.++++++++++|.+
T Consensus 2 ~~M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~~i~k~yG~-~v~~ea~~~~~~~~~~~ 80 (392)
T 1t11_A 2 SHMQVTVETLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGK-AVRQDVLGEVMQRHFIE 80 (392)
T ss_dssp -CCEEEEEECSTTEEEEEEEECHHHHHHHHHHHHHHHHTTCCCTTSCSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcCCcEEEEEEEEcHHHHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHhH-HHHHHHHHHHHHHHHHH
Confidence 35999999999999999999999999999999999999999999999999999999999996 79999999999999999
Q ss_pred HHHhhhcccCCcccccccccchhhhccCCCCceEEEEEEEeecccccCCCCCCceeEEEEe----cchhhHHHHHHHHHH
Q 009190 168 AMTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVE----IDNDTAAQQAAEEEL 243 (540)
Q Consensus 168 ai~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~f~v~~ev~Pevel~~~~~yk~i~v~~~----~dedid~~~~~e~~L 243 (540)
|+++.+++|+++|. +. . ..+.++++|+|+++|+|+|+|+|+ +|++++|+++ ++++|++ .|
T Consensus 81 ai~e~~l~~~~~P~-i~--~----~~~~~~~~~~f~~~~ev~Pev~l~---~y~~l~v~~~~~~Vtde~Vd~------~l 144 (392)
T 1t11_A 81 AIVKEKINPAGAPT-FA--P----VEIGEGKDLVFTATFEVYPEVELK---GLENIAVEKPAAEVTDADVAE------ML 144 (392)
T ss_dssp HHHHTTCCBSSCCE-EE--E----EECCTTSCEEEEEEEEBCCCCCCT---TCTTCEEESSCC---CTHHHH------HH
T ss_pred HHHHcCCCcCCCCC-cc--c----cccCCCCCEEEEEEecCCCceecC---CCCceEEEeCCCCcCHHHHHH------HH
Confidence 99999999998752 21 1 246778999999999999999996 8999999975 3667775 56
Q ss_pred HHHHhhcCcccccccCCcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEE
Q 009190 244 RRRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSF 323 (540)
Q Consensus 244 ~~~~~~~~~~~~v~dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~ 323 (540)
.++++++++|.++ +|+++.||+|+|||+|+ .+|++|+++...++.|.+|. +.++|||+++|+||++||+++|
T Consensus 145 ~~l~~~~a~~~~~-~~~~~~gD~V~i~y~g~------~dG~~fd~~~~~~~~~~lG~-g~~ipgfee~L~Gmk~Ge~~~v 216 (392)
T 1t11_A 145 ETLRKQQATWKEV-DEAAENGKRVSIDFVGS------IDGVEFEGGKAENFPLEMGA-GRMIPGFEDGIVGKTKGMEFVI 216 (392)
T ss_dssp HHHHHHHCEEEEC-SCCCCTTCEEEEEEEEE------SSSSCCTTCEEEEEEEETTS-CCBSTTSGGGTTTCCSSCCCCE
T ss_pred HHHHHhcCeeeec-CCCCCCCCEEEEEEEEE------ECCEEccCCCccceEEEecC-CCcchhHHHHhCCCCCCCEEEE
Confidence 7778888888864 89999999999999998 68999999988999999994 7899999999999999999999
Q ss_pred EecCCCCcccccCCCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009190 324 RLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQ 403 (540)
Q Consensus 324 ~v~fPedy~~~~laGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire~l~~~~~~~~~~~~~~~il~~ 403 (540)
+++||++|+..+++|+++.|+|+|++|+++++||||||||+.++++++|+++||+.||++|+++++.++++.++++++++
T Consensus 217 ~v~fp~dy~~~~laGk~~~F~V~v~~i~~~~lpeldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~ 296 (392)
T 1t11_A 217 DVTFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEG 296 (392)
T ss_dssp EEECCTTCSCTTTSSCEEEECCCEEEEEEEECCCCSTGGGGGGSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT
T ss_pred EEeCccccccCCCCCCeEEEEEEEEEEEcCCCCCcCHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985569999999999999999999999999999999999
Q ss_pred HHHhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 009190 404 LYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEF-LENQRENITNVIKQNLAVGDIFKRENL 482 (540)
Q Consensus 404 L~e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~ee~-~e~~~~~a~~~vK~~Lil~~Ia~~enI 482 (540)
|+++++|++|++||+++++++++++..+++ ++ ++ +. .++ .+.++++|+++||++|||++||+++||
T Consensus 297 l~e~~~~~lP~~lv~~e~~~~~~~~~~~l~-~~-~~-~~----------~~~~~e~~~~~Ae~~vk~~Lil~~ia~~e~i 363 (392)
T 1t11_A 297 LVKENEIQVPSALIDQEINVLRQQAAQRFG-GN-VE-AA----------AQLPRELFEEQAKRRVVVGLLLGEVIRTHEL 363 (392)
T ss_dssp BCSCCCEEECHHHHHHHHHHHHHHHHHHSS-CS-HH-HH----------TTSCGGGTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHHHHHHHH-hh-hc-ch----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999998887773 32 11 11 112 344689999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 009190 483 QFSTEDLVKEVENSIAEL 500 (540)
Q Consensus 483 ~VseeEi~~ei~~~~~~~ 500 (540)
+||++||++++.+++++|
T Consensus 364 ~vt~eev~~~i~~~a~~y 381 (392)
T 1t11_A 364 KADEEKVKALITEMATAY 381 (392)
T ss_dssp CCCHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHc
Confidence 999999999999988653
No 3
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=100.00 E-value=1.2e-71 Score=595.40 Aligned_cols=406 Identities=19% Similarity=0.310 Sum_probs=344.0
Q ss_pred ceEEEeecCCceeEEEEEEchhhHHHHHHHHHHHHHhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 009190 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (540)
Q Consensus 90 m~vt~~~~~~~~~~l~v~v~~~~v~~~~~k~l~~~~k~~~IpGFRkGKvP~~vi~k~~G~~~i~~e~~e~li~~~~~~ai 169 (540)
|+|++++.+++.+.|+|+||+++|+.+++++|++++++++||||||||||++||+++||+ .++.++++.+++.++.. +
T Consensus 1 M~v~~~~~e~~~~~l~i~v~~~~~~~~~~~~~k~~~k~v~ipGFRkGKvP~~vi~k~yG~-~v~~ev~~~l~~~~~~~-~ 78 (433)
T 3gty_X 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE-EFQEYTLDFLMDLIPDT-L 78 (433)
T ss_dssp CEEEEEEEETTEEEEEEECCTTHHHHHHHHHHHHHHTSCCCCC--CCCCCSHHHHTTSTT-HHHHHHHHHHHTTSTTT-S
T ss_pred CceEEEEcCCCEEEEEEEEcHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHhhH-HHHHHHHHHHHHHHHHH-H
Confidence 899999999999999999999999999999999999999999999999999999999998 68889999999998744 4
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEEeecccccCCCCCCceeEEEEecchhhHHHHHHHHHHHHHHhh
Q 009190 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWNPGNGYKNLKIVVEIDNDTAAQQAAEEELRRRHKS 249 (540)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~f~v~~ev~Pevel~~~~~yk~i~v~~~~dedid~~~~~e~~L~~~~~~ 249 (540)
.+. .|+++|. +. . ..+ .+++|+|+++|+|+|+|+|+ +|++++|+++...+|.+ .++++.|.+++++
T Consensus 79 ~~e--~~~~~P~-i~--~----~~~-~~~~~~f~~~vev~Pev~l~---~y~~l~v~~~~~~eVtd-e~Vd~~l~~l~~~ 144 (433)
T 3gty_X 79 KDR--KLILSPI-VT--E----REL-KDVTARVVVEVHEEPEVRIG---DISKIEVEKVDEEKVLE-KYVERRIEDLRES 144 (433)
T ss_dssp SSS--CBSSCCE-EE--E----EEE-CSSCEEEEEEEEBCCEEECC---CGGGSEEEEECHHHHHH-HHHHHHHHHHHHH
T ss_pred Hhc--CCCCCCC-cC--c----ccc-cCCCEEEEEEEEecCCcccC---CcCcceeeecCCCCCCH-HHHHHHHHHHHHh
Confidence 433 5676542 21 1 123 36789999999999999996 89999998762111211 1234578889999
Q ss_pred cCcccccccCCcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCC
Q 009190 250 LGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPE 329 (540)
Q Consensus 250 ~~~~~~v~dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPe 329 (540)
+++|.++ +|+++.||+|+|||+|+ .+|++|+|+.+.+|.+.+|+ +. | |+++|+||++||+++|+++|
T Consensus 145 ~a~~~~v-e~~a~~gD~V~id~~~~------~dG~~~~~~~~~~~~l~~g~-~~--~-fe~~liG~k~Ge~~~~~vtF-- 211 (433)
T 3gty_X 145 HALLEPK-EGPAEAGDLVRVNMEVY------NEEGKKLTSREYEYVISEDE-DR--P-FVKDLVGKKKGDVVEIEREY-- 211 (433)
T ss_dssp TCCEEEC-CSCCCTTSEEEEEEEEE------CTTSCEEEEEEEEEECCSSC-CC--T-THHHHTTCCTTCEEEEEEEE--
T ss_pred cCeeecc-ccccCCCCEEEEEEEEE------ECCEECcCCCCCCeEEEecC-Cc--h-HHHHhCCCCCCceEEEEEee--
Confidence 9999875 78999999999999998 68999999888899999885 43 5 99999999999999999988
Q ss_pred CcccccCCCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 009190 330 SWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVE 409 (540)
Q Consensus 330 dy~~~~laGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire~l~~~~~~~~~~~~~~~il~~L~e~~~ 409 (540)
+||+++|+|||++|+++++||||||||++++++++|+++||+.||++|+++++.++++.++++++++|+++++
T Consensus 212 -------aGk~a~F~VtV~~Ik~~~lPEldDEfak~~~~~~~tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~l~e~~~ 284 (433)
T 3gty_X 212 -------EGKKYTYKLEVEEVYKRTLPEIGDELAKSVNNEFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVE 284 (433)
T ss_dssp -------TTEEEEEEEEEEEEEEECCCCSSHHHHHTTCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCE
T ss_pred -------CCCeEEEEEEEEEEEEecCCcccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6999999999999999999999999999996568999999999999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Q 009190 410 IDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQRENITNVIKQNLAVGDIFKRENLQFSTEDL 489 (540)
Q Consensus 410 ~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~ee~~e~~~~~a~~~vK~~Lil~~Ia~~enI~VseeEi 489 (540)
|+||++||++++++++++ ++ +++ +.++|++..+ +.+++++.+++.|+++||++|||++||+++||+||++|+
T Consensus 285 ~~lP~~lv~~e~~~~~~~----l~-~q~-~~~~~l~~~~--~~e~~~e~~~~~Ae~~vk~~Lil~~Ia~~e~I~vt~eev 356 (433)
T 3gty_X 285 IEISDRTLEILVNEAINR----LK-REG-RYEQIVSSYE--SEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEEL 356 (433)
T ss_dssp EECCHHHHHHHHHHHHHH----HH-TTT-HHHHHHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHH----HH-Hhh-hHHHHHHHcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999999999887754 42 233 5566665443 348899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH----hhhhcc-HHHHHHHHHHHHHHHHHHHHHHHhCeeeeec
Q 009190 490 VKEVENSIAELKQ----QKQEYD-EDRVREQVIDILEGAKVLEWLREHAEIQYIT 539 (540)
Q Consensus 490 ~~ei~~~~~~~~~----~~~~~~-~~~~~~~i~~~l~~~Kvld~L~e~aki~e~~ 539 (540)
++++..++++|+. +...|. .++++++++..++++||++||+++|+|++++
T Consensus 357 ~~~i~~~A~~yg~~~~~~~~~~~~~~~~~~~l~~~i~~~Kv~d~l~e~akv~e~~ 411 (433)
T 3gty_X 357 EKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVKVKVVE 411 (433)
T ss_dssp HHHHTTSTTTTTSCHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHTTTSEEEEEC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCEEEeeC
Confidence 9999888765421 111121 1234567889999999999999999999886
No 4
>1p9y_A Trigger factor, TF; alpha-beta protein, isomerase; 2.15A {Escherichia coli} SCOP: d.241.2.1 PDB: 1oms_A*
Probab=99.96 E-value=1.1e-28 Score=218.78 Aligned_cols=119 Identities=19% Similarity=0.345 Sum_probs=108.9
Q ss_pred cceEEEeecCCceeEEEEEEchhhHHHHHHHHHHHHHhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHH
Q 009190 89 DIEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHA 168 (540)
Q Consensus 89 ~m~vt~~~~~~~~~~l~v~v~~~~v~~~~~k~l~~~~k~~~IpGFRkGKvP~~vi~k~~G~~~i~~e~~e~li~~~~~~a 168 (540)
.|+++++++++++++|+|+||+++++++++++|++++++++||||||||||++||+++||. +|+.++++++++++|.+|
T Consensus 3 ~M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~v~ipGFRkGKvP~~vi~k~yG~-~v~~ea~~~~i~~~~~~a 81 (121)
T 1p9y_A 3 HMQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGLRKGKVPMNIVAQRYGA-SVRQDVLGDLMSRNFIDA 81 (121)
T ss_dssp -CEEEEEECSTTEEEEEEEECHHHHHHHHHHHHHHHHTTCCCTTSCTTCSCHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEEEEEEECHHHHHHHHHHHHHHHHhhCccCCcCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999997 699999999999999999
Q ss_pred HHhhhcccCCcccccccccchhhhccCCCCceEEEEEEEeecccccC
Q 009190 169 MTSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAPEVKWN 215 (540)
Q Consensus 169 i~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~f~v~~ev~Pevel~ 215 (540)
+++.+++|+++| .+ +. ..++++++|+|+++|+|+|+|+|+
T Consensus 82 i~e~~l~~~~~P-~i----~~--~~~~~~~~~~f~~~~ev~Pev~l~ 121 (121)
T 1p9y_A 82 IIKEKINPAGAP-TY----VP--GEYKLGEDFTYSVEFEVYPEVELQ 121 (121)
T ss_dssp HHHTTCCCEEEE-EE----EE--CCCCSSSCEEEEEEEECCCCCCC-
T ss_pred HHHcCCCCCCCC-cc----cc--cccCCCCCEEEEEEEEEcCccccC
Confidence 999999999864 22 11 346778999999999999999983
No 5
>2d3o_1 Trigger factor, TF; ribosome, nascent chain, protein folding, SRP; 3.35A {Deinococcus radiodurans} PDB: 2aar_7
Probab=99.94 E-value=3.7e-27 Score=206.13 Aligned_cols=112 Identities=24% Similarity=0.415 Sum_probs=92.3
Q ss_pred ceEEEeecCCceeEEEEEEchhhHHHHHHHHHHHHHhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 009190 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (540)
Q Consensus 90 m~vt~~~~~~~~~~l~v~v~~~~v~~~~~k~l~~~~k~~~IpGFRkGKvP~~vi~k~~G~~~i~~e~~e~li~~~~~~ai 169 (540)
|++++++ ++++++|+|+||++++++++++++++++++++||||||||||++||+++||+++|+.++++++++++|.+|+
T Consensus 1 M~v~~e~-~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~vi~k~yG~~~v~~ea~~~~i~~~~~~ai 79 (112)
T 2d3o_1 1 MAELISK-EGNKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAPRKVIENRVGKGYVESQVRDRLLETHYSQGL 79 (112)
T ss_dssp ----------CCEEEEECCCGGGTHHHHHHHHHHHHTTSCBTTBCTTCCCSTTHHHHTTTTSSHHHHHHHHHHHHHHHHH
T ss_pred CceEEEc-CCcEEEEEEEECHHHHHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999 999999999999999999999999999999999999999999999999999557999999999999999999
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEEeec
Q 009190 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAP 210 (540)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~f~v~~ev~P 210 (540)
++.+++|+++|. ++. . ++++++|+|+++|+|+|
T Consensus 80 ~e~~l~~~~~P~-----i~~--~-~~~~~~~~f~~~~ev~P 112 (112)
T 2d3o_1 80 RELGLNLVDATV-----DPQ--D-VQSGQAFEFTVKGETYP 112 (112)
T ss_dssp HHSCCCCCCEEC-----CCC--C-CCSSSCCCEEEEEC---
T ss_pred HHcCCCCCCCCc-----ccc--c-ccCCCCEEEEEEEEecC
Confidence 999999998642 221 3 66789999999999998
No 6
>2nsc_A Trigger factor, TF; chaperone; 2.20A {Thermotoga maritima} PDB: 2nsb_A
Probab=99.93 E-value=4.4e-26 Score=198.39 Aligned_cols=109 Identities=23% Similarity=0.338 Sum_probs=100.0
Q ss_pred ceEEEeecCCceeEEEEEEchhhHHHHHHHHHHHHHhhCCCCCCCCCCCcHHHHHHhhChHHHHHHHHHHHHHhhHHHHH
Q 009190 90 IEVTESPEPNSTVRLSVEVPEAVCKDSYKRVLNELMKQVKIPGFRPGKIPESVLVGFVGEQNVKKATVESILKRTLPHAM 169 (540)
Q Consensus 90 m~vt~~~~~~~~~~l~v~v~~~~v~~~~~k~l~~~~k~~~IpGFRkGKvP~~vi~k~~G~~~i~~e~~e~li~~~~~~ai 169 (540)
|+++++++++++++|+|+||++++++++++++++++++++||||||||||++||+++||. +|+.+++++++++ |.+|+
T Consensus 1 M~v~~e~~~~~~~~l~v~v~~~~~~~~~~~~~~~~~k~~~ipGFRkGKvP~~vi~k~yG~-~v~~ea~~~~i~~-~~~ai 78 (109)
T 2nsc_A 1 MEVKELERDKNRVVLEYVFGAEEIAQAEDKAVRYLNQRVEIPGFRKGRIPKNVLKMKLGE-EFQEYTLDFLMDL-IPDTL 78 (109)
T ss_dssp CEEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHHHTTCCCTTSCTTCCCHHHHHHHHGG-GHHHHHHHHHHTT-HHHHT
T ss_pred CceEEEEcCCCEEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcCCCCCCHHHHHHHHhH-HHHHHHHHHHHHH-HHHHH
Confidence 899999999999999999999999999999999999999999999999999999999996 7999999999999 99999
Q ss_pred HhhhcccCCcccccccccchhhhccCCCCceEEEEEEEeec
Q 009190 170 TSVTGRALRDSVRIVTKFSEMEKNYSSLNSLSYDVLVDVAP 210 (540)
Q Consensus 170 ~e~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~f~v~~ev~P 210 (540)
++.++ +++| . ++. ..++ +++|+|+++|+|+|
T Consensus 79 ~e~~l--~~~P-~----i~~--~~~~-~~~~~f~~~~ev~P 109 (109)
T 2nsc_A 79 KDRKL--ILSP-I----VTE--RELK-DVTARVVVEVHEEP 109 (109)
T ss_dssp TTSCC--SSCC-C----CCC--CCCC-CCCCCCCCCCCCCC
T ss_pred HHcCc--CCCC-c----ccc--cccc-CCCEEEEEEEEecC
Confidence 99887 6654 2 211 3467 89999999999998
No 7
>2nsa_A Trigger factor, TF; chaperone; 1.70A {Thermotoga maritima}
Probab=99.83 E-value=1.5e-20 Score=176.08 Aligned_cols=158 Identities=22% Similarity=0.282 Sum_probs=135.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcCC
Q 009190 369 GCTTIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSS 448 (540)
Q Consensus 369 ~~~tleelk~~Ire~l~~~~~~~~~~~~~~~il~~L~e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~~ 448 (540)
+++|+++||+.||++|+.+++..++..++++++++|++.++|+ ||+.+++++++++..++ .++|++.++|..+
T Consensus 2 e~~tleelk~~ir~~l~~~~~~~~~~~~~~~vld~l~e~~~~~----lve~e~~~~~~~~~~~l-~~~g~~~~~~~~~-- 74 (170)
T 2nsa_A 2 EFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVEIE----ISDRTLEILVNEAINRL-KREGRYEQIVSSY-- 74 (170)
T ss_dssp CCCSHHHHHHHTCCBGGGGCCTTHHHHHHHHHHHHGGGGCCCC----CCHHHHHHHHHHHHHHH-HHHTCHHHHHHTS--
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch----HHHHHHHHHHHHHHHHH-HHcCCCHHHHhcc--
Confidence 5899999999999999999999999999999999999999987 88888889998888888 4679998888754
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH----hhhhc-cHHHHHHHHHHHHHHH
Q 009190 449 PKAVKEFLENQRENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQ----QKQEY-DEDRVREQVIDILEGA 523 (540)
Q Consensus 449 ~~~~ee~~e~~~~~a~~~vK~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~~----~~~~~-~~~~~~~~i~~~l~~~ 523 (540)
+ +.++|.+.+++.|+++||++||+++||+++||+||++||++++.+++.+|+. +...+ +...++..++..++.+
T Consensus 75 ~-~~e~~~e~~~~~A~~~vk~~lil~~ia~~e~I~vsdeev~~~i~~~A~~y~~~~~~~~~~~~~~~~~~~~i~~~i~~~ 153 (170)
T 2nsa_A 75 E-SEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKR 153 (170)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHhcchhHHHHHHHHHHHH
Confidence 1 4678899999999999999999999999999999999999999999877641 11122 1234566777778899
Q ss_pred HHHHHHHHhCe
Q 009190 524 KVLEWLREHAE 534 (540)
Q Consensus 524 Kvld~L~e~ak 534 (540)
||++||+++|.
T Consensus 154 K~~d~l~~~a~ 164 (170)
T 2nsa_A 154 KVLDLLLQEVE 164 (170)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHHHhh
Confidence 99999999985
No 8
>1zxj_A MPN555, hypothetical protein Mg377 homolog; mostly alpha helical protein, TRI-lobal structure, structural genomics, PSI; 2.80A {Mycoplasma pneumoniae}
Probab=99.79 E-value=1.7e-19 Score=173.90 Aligned_cols=149 Identities=13% Similarity=0.197 Sum_probs=122.6
Q ss_pred hCCCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHhcCcCCChhHHHHHHHHHHHHHHHH-HHhc
Q 009190 366 LLPGCTTIEQVKETLLQKCREVEQTAK---------DQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQ-MQAG 435 (540)
Q Consensus 366 l~~~~~tleelk~~Ire~l~~~~~~~~---------~~~~~~~il~~L~e~~~~~lPe~lv~~e~~~~~~~~~~~-l~~~ 435 (540)
++++++|+++||+.||++|+++.+.++ +..++++++++|++.++|+||++ +++++++++..+ ++ +
T Consensus 51 ~~~~~etleeLKe~Irk~le~e~e~~~~~~~~~~~~~~~~k~~vld~Lve~~e~evPea----Ev~~l~~q~~q~~l~-~ 125 (218)
T 1zxj_A 51 IFADPAFIEQHRQRILASFKDAKESALYHELTHIVIKDNLFSCAMNAIVGYFEFNIDEA----ELKNVMEGLKRDVIQ-G 125 (218)
T ss_dssp SCCCHHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEECCHH----HHHHHHHHHHHC-----
T ss_pred eeCCcccHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhCCCCCCHH----HHHHHHHHHHHHHHh-c
Confidence 455788999999999999999966666 88999999999999999999999 888888877766 63 1
Q ss_pred CCCCHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh-hccHHHHHH
Q 009190 436 MKLNEQQLAALSSPKAVKEFLENQRENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKQ-EYDEDRVRE 514 (540)
Q Consensus 436 ~~~~~e~~~~~~~~~~~ee~~e~~~~~a~~~vK~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~~~~~-~~~~~~~~~ 514 (540)
+ + . +.+++.|+++||++|+|++||+++||+||++||++++.+++++|+...+ .+++.+.++
T Consensus 126 q--~---------~-------e~~re~AErRVKlgLvL~eIak~e~IeVtdEEV~~~I~e~A~~Y~~~~e~~~~n~~~l~ 187 (218)
T 1zxj_A 126 A--E---------D-------NTVQAIAEKIIKKALVFNHLQKEWKVEITDEVVKNVISLYYEKTNQSVREYLDDKQKFE 187 (218)
T ss_dssp ---C---------C-------HHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHSCSCCHHHHSCHHHHH
T ss_pred c--C---------H-------HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHcCCCHHHHHhCHHHHH
Confidence 1 1 0 3468999999999999999999999999999999999999887641100 033345677
Q ss_pred HHHHHHHHHHHHHHHHHhCeeee
Q 009190 515 QVIDILEGAKVLEWLREHAEIQY 537 (540)
Q Consensus 515 ~i~~~l~~~Kvld~L~e~aki~e 537 (540)
.++..++++||+|||+++|+|+-
T Consensus 188 ~lr~~IleeKvvd~Ile~AkVt~ 210 (218)
T 1zxj_A 188 GVRTALLEERMVLETINHFKFHF 210 (218)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHhCeEEE
Confidence 89999999999999999999874
No 9
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.76 E-value=7.5e-19 Score=153.66 Aligned_cols=100 Identities=20% Similarity=0.429 Sum_probs=80.1
Q ss_pred HHHhhcCcccccccCCcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEE
Q 009190 245 RRHKSLGSLKIVTDRGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFR 324 (540)
Q Consensus 245 ~~~~~~~~~~~v~dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~ 324 (540)
++++++++|.++++++++.||+|+|+|+++ .+|+.|+++..+++.|.+|. +.++|||+++|+||++|++++|.
T Consensus 14 ~l~~~~a~~~~v~~~~~~~gD~V~v~Y~g~------~dG~~fdss~~~p~~f~lG~-g~vi~G~ee~L~Gmk~Ge~~~v~ 86 (113)
T 1hxv_A 14 KLAKTKSTMVDVSDKKLANGDIAIIDFTGI------VDNKKLASASAQNYELTIGS-NSFIKGFETGLIAMKVNQKKTLA 86 (113)
T ss_dssp ---------------CCCSSEEEEEEEEEE------ETTEECSTTCCSEEEEEETS-SCSCTTHHHHHHTSCSSEEEEEC
T ss_pred HHHHhCCeEEecCCCCCCCCCEEEEEEEEE------ECCEEcccCCccCEEEEECC-CChhHHHHHHHCCCCCCCEEEEE
Confidence 355567788876678999999999999998 47899999888899999994 68999999999999999999999
Q ss_pred ecCCCCcccccCCCceeEEEEEEEEee
Q 009190 325 LAFPESWRQEHLRGVQAQFTVECRELF 351 (540)
Q Consensus 325 v~fPedy~~~~laGk~v~F~VtVk~Ik 351 (540)
++||++|+...++|+++.|+|+|++|+
T Consensus 87 i~fP~~Yg~~~~~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 87 LTFPSDYHVKELQSKPVTFEVVLKAIK 113 (113)
T ss_dssp CCCCTTSSSSGGGSCCCEEEEEECCBC
T ss_pred EeCchhhCcCCCCCCEEEEEEEEEEEC
Confidence 999999999999999999999999884
No 10
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.41 E-value=5.7e-13 Score=113.78 Aligned_cols=90 Identities=16% Similarity=0.255 Sum_probs=79.3
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
+++++.||+|+|+|+++. .+|+.|+++. .+++.|.+|. +.++|||+++|.||++|++++|.++.+..|+...
T Consensus 3 g~~~~~gd~V~v~y~~~~-----~dG~~~d~s~~~~~p~~f~lG~-~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~ 76 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKL-----EDGTEFDSSLPQNQPFVFSLGT-GQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERG 76 (102)
T ss_dssp CCCCCTTCEEEEEEEEEC-----TTSCEEEESTTTTCCEEEETTS-SSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTC
T ss_pred CCcCCCCCEEEEEEEEEE-----CCCCEEEeCCCCCCCEEEEeCC-CCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCC
Confidence 467899999999999982 4788888764 4789999994 6899999999999999999999998888898887
Q ss_pred C-----CCceeEEEEEEEEeeec
Q 009190 336 L-----RGVQAQFTVECRELFYR 353 (540)
Q Consensus 336 l-----aGk~v~F~VtVk~Ik~~ 353 (540)
+ +|+++.|+|+|++|+++
T Consensus 77 ~~~~Ip~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 77 APPKIPGGATLVFEVELLKIERR 99 (102)
T ss_dssp BTTTBCTTCCEEEEEEEEEEGGG
T ss_pred CCCCcCcCCeEEEEEEEEEeccc
Confidence 7 89999999999999875
No 11
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.32 E-value=3.6e-12 Score=114.64 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=78.3
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC-
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l- 336 (540)
.++.||.|+|+|+++. .+|+.|+++. .+++.|.+|. +.++|||+++|.||++|++++|.++++..|....+
T Consensus 29 ~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-~~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~ 102 (135)
T 1r9h_A 29 KPTTGTTVKVHYVGTL-----ENGTKFDSSRDRGDQFSFNLGR-GNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSP 102 (135)
T ss_dssp CCCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETTT-TSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBT
T ss_pred CCCCCCEEEEEEEEEE-----CCCCEEEecCcCCCCEEEEeCC-CCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCC
Confidence 4789999999999983 4788888764 4789999994 68999999999999999999999998889998877
Q ss_pred ----CCceeEEEEEEEEeeecCCCCCChH
Q 009190 337 ----RGVQAQFTVECRELFYRDLPKLDDS 361 (540)
Q Consensus 337 ----aGk~v~F~VtVk~Ik~~~lPELdDE 361 (540)
+|.++.|+|++++|+++.+|+-+|-
T Consensus 103 ~~Ip~~~~l~f~v~l~~i~~~~l~~~~d~ 131 (135)
T 1r9h_A 103 PKIPGGATLIFEVELFEWSAEDISPDRDG 131 (135)
T ss_dssp TTBCTTCCEEEEEEEEEEEC---------
T ss_pred CCcCcCCcEEEEEEEEEeecCCcCcCCCC
Confidence 8999999999999999999887763
No 12
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.30 E-value=7.2e-12 Score=111.66 Aligned_cols=91 Identities=15% Similarity=0.155 Sum_probs=79.4
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
.++++.||.|+|+|+++. + .+|+.|+++. ..++.|.+|. +.++|||+++|.||++|++++|.++++..|+...
T Consensus 31 g~~~~~gd~V~v~Y~g~~-~---~dG~~fd~s~~~~~p~~f~lG~-g~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~ 105 (129)
T 2vn1_A 31 ENIPKKGNEVTVHYVGKL-E---STGKVFDSSFDRNVPFKFHLEQ-GEVIKGWDICVSSMRKNEKCLVRIESMYGYGDEG 105 (129)
T ss_dssp GGSCCTTCEEEEEEEEEE-T---TTCCEEEEGGGTTCCEEEETTS-SSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTC
T ss_pred CCcCCCCCEEEEEEEEEE-C---CCCeEEEecCCCCccEEEEeCC-CCcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCC
Confidence 356889999999999982 1 3788888765 4789999994 6899999999999999999999999888999877
Q ss_pred C-----CCceeEEEEEEEEeeec
Q 009190 336 L-----RGVQAQFTVECRELFYR 353 (540)
Q Consensus 336 l-----aGk~v~F~VtVk~Ik~~ 353 (540)
+ +|+++.|+|+|++|+++
T Consensus 106 ~~~~Ip~~~~l~f~vel~~v~~~ 128 (129)
T 2vn1_A 106 CGESIPGNSVLLFEIELLSFREL 128 (129)
T ss_dssp BTTTBCTTCCEEEEEEEEEEECC
T ss_pred CCCCcCCCCeEEEEEEEEEEecC
Confidence 7 89999999999999875
No 13
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.27 E-value=9.9e-12 Score=116.10 Aligned_cols=94 Identities=13% Similarity=0.217 Sum_probs=79.4
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc-CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccc-----
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET-KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQE----- 334 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~-~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~----- 334 (540)
++.||+|+|+|+++. .+|+.|+++.. +++.|.+|. +.++|||+++|+||++|++++|.+++++.|+..
T Consensus 3 i~~gd~V~v~Y~g~~-----~dG~~fdss~~~~P~~f~lG~-g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~~~~v 76 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRT-----EDGVLVDESPVSAPLDYLHGH-GSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLV 76 (171)
T ss_dssp CCTTEEEEEEEEEEE-----TTSCEEEECCSSSCEEEETTS-CSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCCTTSE
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEeeccCCcCEEEEECC-CCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCChhhE
Confidence 678999999999982 47889988754 799999994 689999999999999999999999976667532
Q ss_pred -----------------------------------------------cCCCceeEEEEEEEEeeecCCCCCChHHHh
Q 009190 335 -----------------------------------------------HLRGVQAQFTVECRELFYRDLPKLDDSLAG 364 (540)
Q Consensus 335 -----------------------------------------------~laGk~v~F~VtVk~Ik~~~lPELdDEfak 364 (540)
.|||+++.|+|+|.+|+... .+|++.
T Consensus 77 ~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~~at----~eei~~ 149 (171)
T 2k8i_A 77 QRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREAT----EEELAH 149 (171)
T ss_dssp EEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEEESCCSSCCCEEEEEEEEEEEEECC----SHHHHH
T ss_pred EEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEEeccCC----HHHHhc
Confidence 69999999999999998643 456654
No 14
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.27 E-value=1.7e-11 Score=106.51 Aligned_cols=87 Identities=17% Similarity=0.253 Sum_probs=76.9
Q ss_pred CC-cccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 259 RG-LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 259 r~-~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
.. ++.||.|+|+|+++. .+|+.|++... +++.|.+|. +.++|||+++|.||++|++++|.++++.+|+...
T Consensus 19 ~~~~~~gd~V~v~y~~~~-----~dG~~~d~s~~~~~p~~f~lG~-~~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~ 92 (113)
T 1yat_A 19 ATFPKTGDLVTIHYTGTL-----ENGQKFDSSVDRGSPFQCNIGV-GQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRG 92 (113)
T ss_dssp SCCCCTTCEEEEEEEEEE-----TTSCEEEESTTTTCCEEEETTS-SSSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTC
T ss_pred cccCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCcEEEEeCC-CCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCC
Confidence 44 789999999999983 47888887653 689999994 6899999999999999999999999999999887
Q ss_pred C-----CCceeEEEEEEEEee
Q 009190 336 L-----RGVQAQFTVECRELF 351 (540)
Q Consensus 336 l-----aGk~v~F~VtVk~Ik 351 (540)
+ +|+++.|+|+|++|+
T Consensus 93 ~~~~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 93 FPGLIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp BTTTBCTTCCEEEEEEEEEEC
T ss_pred CCCCcCCCCeEEEEEEEEEeC
Confidence 7 889999999999985
No 15
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.23 E-value=2.8e-11 Score=108.52 Aligned_cols=87 Identities=15% Similarity=0.270 Sum_probs=77.2
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
+++++.||.|+|+|+++. .+|+.|++.. .+++.|.+|. +.++|||+++|.||++|++++|.++++.+|....
T Consensus 40 G~~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-g~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~ 113 (133)
T 2y78_A 40 GAEARAGQTVSVHYTGWL-----TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARG 113 (133)
T ss_dssp SCBCCTTSEEEEEEEEEE-----TTSCEEEETTTTTCCEEEETTS-SSSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTC
T ss_pred CCCCCCCCEEEEEEEEEE-----CCCCEEeccCcCCCCEEEEeCC-CChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCC
Confidence 456889999999999983 4788888764 4789999995 6899999999999999999999999999999988
Q ss_pred CCC-----ceeEEEEEEEEe
Q 009190 336 LRG-----VQAQFTVECREL 350 (540)
Q Consensus 336 laG-----k~v~F~VtVk~I 350 (540)
++| +++.|+|+|++|
T Consensus 114 ~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 114 AGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp BTTTBCTTCCEEEEEEEEEC
T ss_pred CCCCCCCCCeEEEEEEEEEC
Confidence 877 899999999886
No 16
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.22 E-value=2.3e-11 Score=104.61 Aligned_cols=85 Identities=14% Similarity=0.243 Sum_probs=75.4
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC--
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL-- 336 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l-- 336 (540)
++.||.|+|+|+++. .+|+.|+++.. +++.|.+|. +.++|||+++|.||++|++++|.++++..|....+
T Consensus 16 ~~~gd~V~v~y~~~~-----~dG~~~d~s~~~~~p~~f~lG~-~~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~ 89 (107)
T 2ppn_A 16 PKRGQTCVVHYTGML-----EDGKKFDSSRDRNKPFKFMLGK-QEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPG 89 (107)
T ss_dssp CCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETTS-CCSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEeCC-CChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCCCC
Confidence 789999999999983 47888887643 689999994 68999999999999999999999998889988877
Q ss_pred ---CCceeEEEEEEEEee
Q 009190 337 ---RGVQAQFTVECRELF 351 (540)
Q Consensus 337 ---aGk~v~F~VtVk~Ik 351 (540)
+|+++.|+|+|++|+
T Consensus 90 ~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 90 IIPPHATLVFDVELLKLE 107 (107)
T ss_dssp TBCTTCCEEEEEEEEEEC
T ss_pred CcCCCCeEEEEEEEEEeC
Confidence 899999999999984
No 17
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.21 E-value=3.9e-11 Score=111.72 Aligned_cols=104 Identities=14% Similarity=0.165 Sum_probs=88.2
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC--
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL-- 336 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l-- 336 (540)
++.||.|+|+|+++. .+|+.|+++.. .++.|.+| .++|||+++|.||++|++++|.++++..|+....
T Consensus 53 ~~~gd~V~v~Y~g~l-----~dG~~fdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~~ 124 (167)
T 1jvw_A 53 PAIDDKCEVHYTGRL-----RDGTVFDSSRERGKPTTFRPN---EVIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGG 124 (167)
T ss_dssp CCTTCCEEEEEEEEC-----TTSCEEEEHHHHTSCEEECGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCSSS
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEeeccccCCCEEEEeC---chhHHHHHHHcCCCCCCEEEEEECchhhCCCCCCCC
Confidence 788999999999983 47889987643 68888875 5999999999999999999999998889987763
Q ss_pred ---CCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHHHHHH
Q 009190 337 ---RGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCRE 386 (540)
Q Consensus 337 ---aGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire~l~~ 386 (540)
+|+++.|+|+|++|++. | ...|.+++++.|++.++.
T Consensus 125 ~Ipp~s~LiF~VeL~~i~~~--~------------~~~~~~e~~~~l~k~~~~ 163 (167)
T 1jvw_A 125 MIPPYSPLEFDVELISIKDG--G------------KGRTAEEVDEILRKAEED 163 (167)
T ss_dssp SSCTTCCEEEEEEEEEEGGG--C------------CSCBHHHHHHHHHHHHHC
T ss_pred CcCCCCeEEEEEEEEEEEcC--C------------CCCCHHHHHHHHHHHhhh
Confidence 78999999999999843 1 245789999999988765
No 18
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.21 E-value=4.3e-11 Score=106.86 Aligned_cols=84 Identities=17% Similarity=0.304 Sum_probs=75.5
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC--
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL-- 336 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l-- 336 (540)
++.||.|+|+|+++. .+|+.|++... +++.|.+|. +.++|||+++|.||++|+++.|.++++.+|+...+
T Consensus 40 ~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-g~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~ 113 (130)
T 2lgo_A 40 PQAGKKVTVHYDGRF-----PDGKQFDSSRSRGKPFQFTLGA-GEVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPP 113 (130)
T ss_dssp CCTTSEEEEEEEEEC-----TTSCEEECTTTTTCCEEEETTS-TTSCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCCST
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEccCcCCCCEEEEeCC-CCccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCCCC
Confidence 789999999999982 47888988754 689999994 68999999999999999999999999999998887
Q ss_pred ---CCceeEEEEEEEEe
Q 009190 337 ---RGVQAQFTVECREL 350 (540)
Q Consensus 337 ---aGk~v~F~VtVk~I 350 (540)
+|+++.|+|+|++|
T Consensus 114 ~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 114 VIPPKATLVFEVELLAV 130 (130)
T ss_dssp TSCSSCCEEEEEEEEEC
T ss_pred CcCCCCeEEEEEEEEEC
Confidence 88999999999876
No 19
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.17 E-value=1e-10 Score=107.21 Aligned_cols=90 Identities=12% Similarity=0.161 Sum_probs=76.8
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCC-cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcc----
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE-TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR---- 332 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~-~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~---- 332 (540)
.++++.||+|+++|+++.. .+|+.|+++. .+++.|.+|. +.++|||+++|+||++|++++|.++++..|+
T Consensus 4 ~~~i~~gd~V~v~Y~g~~~----~dG~~fdss~~~~p~~f~~G~-g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~~ 78 (151)
T 2kr7_A 4 HDLESIKQAALIEYEVREQ----GSSIVLDSNISKEPLEFIIGT-NQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYES 78 (151)
T ss_dssp CCCTTSCCEEEEEEEEEES----SCSCEEEESTTTCCEEEETTC-CCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCS
T ss_pred ccCCCCCCEEEEEEEEEEC----CCCCEEEeCCCCcCEEEEECC-CCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCCc
Confidence 4678999999999999831 2788998875 4789999994 6899999999999999999999999766663
Q ss_pred ------------------------------------------------cccCCCceeEEEEEEEEeee
Q 009190 333 ------------------------------------------------QEHLRGVQAQFTVECRELFY 352 (540)
Q Consensus 333 ------------------------------------------------~~~laGk~v~F~VtVk~Ik~ 352 (540)
+..|||++++|+|+|.+|+.
T Consensus 79 ~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG~~L~F~v~v~~v~~ 146 (151)
T 2kr7_A 79 SYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAGKTLAFRFKVLGFRE 146 (151)
T ss_dssp CEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSCCCEEEEEEEEEEEC
T ss_pred ceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCCCEEEEEEEEEEeec
Confidence 45689999999999999974
No 20
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.12 E-value=1e-10 Score=107.63 Aligned_cols=84 Identities=14% Similarity=0.302 Sum_probs=72.4
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc---------------CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEe
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET---------------KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~---------------~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v 325 (540)
++.||+|+|+|+++ .+|+.|+++.. +++.|.+|. +.++|||+++|+||++|++++|.+
T Consensus 2 i~~Gd~V~v~Y~g~------ldG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~-g~vi~G~eeaL~gm~~Ge~~~v~I 74 (157)
T 3pr9_A 2 VEKGKMVKISYDGY------VDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGE-GQVLPGLDEAILEMDVGEEREVVL 74 (157)
T ss_dssp CCTTCEEEEEEEEE------ETTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTS-SSSCHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCEEEEEEEEE------ECCEEEEeccccccccccccccccCCCCEEEEECC-CcHHHHHHHHHcCCCCCCEEEEEE
Confidence 68899999999998 36788876543 689999994 689999999999999999999999
Q ss_pred cCCCCcc-------------------------------------------------cccCCCceeEEEEEEEEee
Q 009190 326 AFPESWR-------------------------------------------------QEHLRGVQAQFTVECRELF 351 (540)
Q Consensus 326 ~fPedy~-------------------------------------------------~~~laGk~v~F~VtVk~Ik 351 (540)
+++..|+ +..|||++++|+|+|.+|-
T Consensus 75 pp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~~~~~V~~v~~~~V~vD~NHPLAG~~L~F~v~v~~v~ 149 (157)
T 3pr9_A 75 PPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVV 149 (157)
T ss_dssp CGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEE
T ss_pred CcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecCCCeEEEEEcCCEEEEECCCccCCCeEEEEEEEEEEE
Confidence 9777774 4678999999999999885
No 21
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.11 E-value=2.7e-10 Score=99.80 Aligned_cols=85 Identities=15% Similarity=0.202 Sum_probs=74.6
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCc---------CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCC
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAET---------KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPES 330 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~---------~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPed 330 (540)
.++.||.|+|+|+++. .+|+.|+++.. .++.|.+|. +.++|||+++|.||++|+++.|.++++..
T Consensus 19 ~p~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~~~~~~~~p~~f~lG~-~~~i~G~e~~l~gm~~Ge~~~v~ip~~~a 92 (119)
T 3kz7_A 19 FPKKGDVVHCWYTGTL-----PDGTVFDTNIQTSSKKKKNAKPLSFKVGV-GKVIRGWDEALLTMSKGEKARLEIEPEWA 92 (119)
T ss_dssp CCCTTCEEEEEEEEEC-----TTSCEEEECCCCSSSTTTTCCCEEEETTS-SSSCHHHHHHHTTCCTTCEEEEEECGGGT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEeccccccccccCCCCEEEEECC-CChhHHHHHHHhCCCCCCEEEEEECcHHh
Confidence 3789999999999983 47888887543 789999994 68999999999999999999999999999
Q ss_pred cccccC------CCceeEEEEEEEEe
Q 009190 331 WRQEHL------RGVQAQFTVECREL 350 (540)
Q Consensus 331 y~~~~l------aGk~v~F~VtVk~I 350 (540)
|+.... ++.++.|+|+|++|
T Consensus 93 YG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 93 YGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp TCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred cCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 987665 78899999999987
No 22
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.10 E-value=2.3e-10 Score=101.27 Aligned_cols=90 Identities=14% Similarity=0.182 Sum_probs=76.9
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCC----cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE----TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQ 333 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~----~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~ 333 (540)
.+.++.||.|+|+|+++.. .+|+.|+++. .+++.+.+|. +.++|||+++|.||++|+++.|.++++..|+.
T Consensus 26 g~~~~~gd~V~v~Y~g~~~----~dG~~fdss~~~~~~~p~~f~lG~-~~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~ 100 (125)
T 4dip_A 26 HRKTKGGDLMLVHYEGYLE----KDGSLFHSTHKHNNGQPIWFTLGI-LEALKGWDQGLKGMCVGEKRKLIIPPALGYGK 100 (125)
T ss_dssp SCCCCTTCEEEEEEEEEET----TTCCEEEEHHHHTTTCCEEEETTS-CSSCHHHHHHSTTCCTTCEEEEEECGGGTTTT
T ss_pred CCcCCCCCEEEEEEEEEEC----CCCcEEEEcccCCCCcCEEEEeCC-CChhHHHHHHHhCCCCCCEEEEEEChHHhcCC
Confidence 4678999999999999831 2788888753 4789999994 68999999999999999999999999999987
Q ss_pred ccC----CCceeEEEEEEEEeee
Q 009190 334 EHL----RGVQAQFTVECRELFY 352 (540)
Q Consensus 334 ~~l----aGk~v~F~VtVk~Ik~ 352 (540)
... ++.++.|+|+|++|++
T Consensus 101 ~g~~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 101 EGKGKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp TCBTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCCCCCeEEEEEEEEEEEc
Confidence 654 4559999999999975
No 23
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.10 E-value=1.9e-10 Score=107.10 Aligned_cols=88 Identities=17% Similarity=0.281 Sum_probs=75.0
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcc-----
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR----- 332 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~----- 332 (540)
.++.||+|+|+|+++. .+|+.|+++.. +++.|.+|. +.++|||+++|.||++||+++|.++....|+
T Consensus 24 ~i~~gd~V~v~Y~g~l-----~dG~vfDss~~~~~P~~f~lG~-g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~~~ 97 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKL-----DDGTTAESTRNNGKPALFRLGD-ASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPD 97 (169)
T ss_dssp SCCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETTS-SSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCCGG
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEECC-CCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCChH
Confidence 5899999999999983 47888887542 789999994 6899999999999999999999998655553
Q ss_pred ------------------------------------------------cccCCCceeEEEEEEEEeeec
Q 009190 333 ------------------------------------------------QEHLRGVQAQFTVECRELFYR 353 (540)
Q Consensus 333 ------------------------------------------------~~~laGk~v~F~VtVk~Ik~~ 353 (540)
+..|||++++|+|+|.+|+..
T Consensus 98 lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~vr~A 166 (169)
T 4dt4_A 98 LIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPA 166 (169)
T ss_dssp GEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEESCC
T ss_pred HEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEeeC
Confidence 457999999999999999743
No 24
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.6e-10 Score=103.77 Aligned_cols=91 Identities=13% Similarity=0.107 Sum_probs=75.3
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc----
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH---- 335 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~---- 335 (540)
.++.||.|+|+|+++. .+|+.|++ ..++.|.+|. +.++|||+++|.||++|++++|.++....|....
T Consensus 33 ~~~~gd~V~v~Y~g~~-----~dG~~fds--~~p~~f~lG~-g~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~ 104 (135)
T 2d9f_A 33 RPVKGQVVTVHLQTSL-----ENGTRVQE--EPELVFTLGD-CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP 104 (135)
T ss_dssp CCCTTSEEEEEEEEEE-----SSSCEEEE--EEEEEEETTS-CCSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCSSS
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEec--CCCEEEEeCC-CChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcCCC
Confidence 5889999999999983 46888886 4789999994 6899999999999999999999886544566554
Q ss_pred --CCCceeEEEEEEEEeeecCCCCC
Q 009190 336 --LRGVQAQFTVECRELFYRDLPKL 358 (540)
Q Consensus 336 --laGk~v~F~VtVk~Ik~~~lPEL 358 (540)
.+|+++.|+|+|++|+...-+|+
T Consensus 105 ~Ip~~~~l~f~vel~~v~~~~~~e~ 129 (135)
T 2d9f_A 105 YIPPHAALCLEVTLKTAVDRPDLEM 129 (135)
T ss_dssp CCCTTCCEEEEEEEEEEESSCSSSS
T ss_pred ccCCCCeEEEEEEEEEeecCCchhh
Confidence 36799999999999998655543
No 25
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.08 E-value=2.1e-10 Score=102.16 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=76.6
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcC------CCCCceEEEEecCCC
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISG------IQRGETKSFRLAFPE 329 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG------~k~Ge~~~~~v~fPe 329 (540)
++.++.||.|+|+|+++. .+|+.|++.. .+++.|.+|. +.++|||+++|+| |++|++++|.++++.
T Consensus 24 G~~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-~~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~ 97 (129)
T 1u79_A 24 GPEAVKGQLIKAHYVGKL-----ENGKVFDSSYNRGKPLTFRIGV-GEVIKGWDQGILGSDGIPPMLTGGKRTLRIPPEL 97 (129)
T ss_dssp SCBCCTTCEEEEEEEEEC-----TTSCEEEEHHHHTSCEEEETTS-SSSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGG
T ss_pred CCCCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEeCC-CCccHHHHHHhcccccccccCCCCEEEEEEChHH
Confidence 456889999999999982 4788888764 4789999994 6899999999999 999999999999888
Q ss_pred CcccccC----------CCceeEEEEEEEEe
Q 009190 330 SWRQEHL----------RGVQAQFTVECREL 350 (540)
Q Consensus 330 dy~~~~l----------aGk~v~F~VtVk~I 350 (540)
.|....+ +|+++.|+|+|++|
T Consensus 98 aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 98 AYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred ccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 9988776 79999999999987
No 26
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.06 E-value=2e-10 Score=102.98 Aligned_cols=88 Identities=13% Similarity=0.074 Sum_probs=69.6
Q ss_pred CCcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC
Q 009190 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL 336 (540)
Q Consensus 259 r~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l 336 (540)
..++.||.|+|+|+++.. .+|+.|+++. .+++.|.+|. +.++|||+++|.||++|++++|.++....|+....
T Consensus 39 ~~~~~gd~V~v~Y~g~l~----~~G~~fdss~~~~~p~~f~lG~-g~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~ 113 (134)
T 3b7x_A 39 DLVAPDASVLVKYSGYLE----HMDRPFDSNYFRKTPRLMKLGE-DITLWGMELGLLSMRRGELARFLFKPNYAYGTLGC 113 (134)
T ss_dssp EECCTTCEEEEEEEEECT----TCSSCSEEC-------CEEC-C-CCCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCB
T ss_pred CCCCCCCEEEEEEEEEEC----CCCeEEEecCCCCCCEEEEcCC-cchhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCC
Confidence 457789999999999831 1588888764 4688999994 67999999999999999999998876556877766
Q ss_pred -----CCceeEEEEEEEEee
Q 009190 337 -----RGVQAQFTVECRELF 351 (540)
Q Consensus 337 -----aGk~v~F~VtVk~Ik 351 (540)
+|+++.|+|+|++|+
T Consensus 114 ~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 114 PPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TTTBCTTCCEEEEEEEEEEC
T ss_pred CCCcCcCCeEEEEEEEEEEe
Confidence 789999999999985
No 27
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.06 E-value=1e-10 Score=114.03 Aligned_cols=93 Identities=13% Similarity=0.263 Sum_probs=76.5
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc---------------CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEe
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET---------------KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~---------------~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v 325 (540)
++.||+|+|+|+++ .+|+.|+++.. .++.|.+|. +.++|||+++|.||++|+++++.+
T Consensus 2 i~~Gd~V~v~Y~g~------ldG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~-g~vIpG~eeaL~Gm~vGek~~v~I 74 (231)
T 3prb_A 2 VEKGKMVKISYDGY------VDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGE-GQVLPGLDEAILEMDVGEEREVVL 74 (231)
T ss_dssp CCTTCEEEEEEEEE------ETTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTS-SSSCHHHHHHHHTCCTTCEEEEEE
T ss_pred CCCCCEEEEEEEEE------ECCEEEEeccchhcccccccccccCCCCEEEEeCC-CcHHHHHHHHHcCCCCCCEEEEEe
Confidence 68899999999998 36788876543 689999994 689999999999999999999999
Q ss_pred cCCCCcc-------------------------------------------------cccCCCceeEEEEEEEEeeecCCC
Q 009190 326 AFPESWR-------------------------------------------------QEHLRGVQAQFTVECRELFYRDLP 356 (540)
Q Consensus 326 ~fPedy~-------------------------------------------------~~~laGk~v~F~VtVk~Ik~~~lP 356 (540)
+....|+ +..|||++++|+|+|.+|......
T Consensus 75 ppe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~eat~e 154 (231)
T 3prb_A 75 PPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDDKKN 154 (231)
T ss_dssp CGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCSHHH
T ss_pred CcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecCCHH
Confidence 8433331 457999999999999999876655
Q ss_pred CCCh
Q 009190 357 KLDD 360 (540)
Q Consensus 357 ELdD 360 (540)
++.+
T Consensus 155 ei~~ 158 (231)
T 3prb_A 155 IVKE 158 (231)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 28
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.05 E-value=4.3e-10 Score=98.52 Aligned_cols=84 Identities=13% Similarity=0.121 Sum_probs=71.9
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC---
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL--- 336 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l--- 336 (540)
.++.||.|+|+|+++. .+|+.|++ ..++.|.+|. +.++|||+++|.||++|+++.|.++....|.....
T Consensus 29 ~~~~gd~V~v~y~g~~-----~dG~~~ds--~~p~~f~lG~-~~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~ 100 (118)
T 2awg_A 29 RPVKGQVVTVHLQTSL-----ENGTRVQE--EPELVFTLGD-CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPY 100 (118)
T ss_dssp CCCTTSEEEEEEEEEC-----TTSCEEEE--EEEEEEETTS-SCSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTTT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEC--CCCEEEEECC-CChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCCCCc
Confidence 5789999999999982 47888886 4788999994 68999999999999999999999876667776653
Q ss_pred --CCceeEEEEEEEEee
Q 009190 337 --RGVQAQFTVECRELF 351 (540)
Q Consensus 337 --aGk~v~F~VtVk~Ik 351 (540)
+|+++.|+|+|++|+
T Consensus 101 Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 101 IPPHAALCLEVTLKTAV 117 (118)
T ss_dssp BCTTCCEEEEEEEEEEE
T ss_pred cCCCCeEEEEEEEEEec
Confidence 789999999999986
No 29
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.05 E-value=4.8e-10 Score=99.70 Aligned_cols=87 Identities=14% Similarity=0.171 Sum_probs=76.4
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC-
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l- 336 (540)
.++.||.|+|+|+++. .+|+.|++.. ..++.|.+|. +.++|||+++|.||++|++++|.++++..|+....
T Consensus 34 ~p~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~ 107 (128)
T 3o5q_A 34 TPMIGDKVYVHYKGKL-----SNGKKFDSSHDRNEPFVFSLGK-GQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSL 107 (128)
T ss_dssp CCCTTCEEEEEEEEEE-----TTSCEEEEHHHHTSCEEEETTS-SSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEecCCCCCCEEEEECC-CCccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCC
Confidence 3689999999999983 4788888753 4679999994 68999999999999999999999999999988876
Q ss_pred ----CCceeEEEEEEEEeee
Q 009190 337 ----RGVQAQFTVECRELFY 352 (540)
Q Consensus 337 ----aGk~v~F~VtVk~Ik~ 352 (540)
++.++.|+|+|++|+.
T Consensus 108 ~~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 108 PKIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp TTBCTTCCEEEEEEEEEEEC
T ss_pred CCcCCCCEEEEEEEEEEecC
Confidence 6899999999999974
No 30
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.05 E-value=3.4e-10 Score=104.37 Aligned_cols=82 Identities=13% Similarity=0.289 Sum_probs=70.2
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcc--------
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR-------- 332 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~-------- 332 (540)
++.||+|+|+|+++ .+|+.|+++. +.|.+|. +.++|||+++|+||++||+++|.+++++.|+
T Consensus 3 i~~gd~V~v~Y~g~------~dG~~fdss~---~~f~~G~-g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~~~lv~ 72 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ------VEGEVLDQGE---LSYLHGH-RNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQ 72 (158)
T ss_dssp CCTTEEEEEEEEEE------ETTEEEEEEE---EEEETTS-SSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCCGGGEE
T ss_pred CCCCCEEEEEEEEE------ECCEEEEeeE---EEEEECC-CCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCCcceEE
Confidence 67899999999998 4688888654 8899994 6899999999999999999999998655552
Q ss_pred ---------------------------------------------cccCCCceeEEEEEEEEeee
Q 009190 333 ---------------------------------------------QEHLRGVQAQFTVECRELFY 352 (540)
Q Consensus 333 ---------------------------------------------~~~laGk~v~F~VtVk~Ik~ 352 (540)
+..|||+++.|+|+|.+|+.
T Consensus 73 ~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAGk~L~F~vev~~v~~ 137 (158)
T 3cgm_A 73 VVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVRE 137 (158)
T ss_dssp EEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEEEE
T ss_pred EEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccCCEEEEEEEEEEeec
Confidence 34589999999999999984
No 31
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.05 E-value=3.7e-10 Score=107.55 Aligned_cols=86 Identities=10% Similarity=0.203 Sum_probs=73.3
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCCc-CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcc-------
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAET-KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWR------- 332 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~-~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~------- 332 (540)
++.||+|+|+|+++. .+|+.|+++.. +++.|.+|. ++++|+|+++|+||++|++++|.+++++.|.
T Consensus 3 i~~gd~V~v~Y~g~~-----~dG~~fdss~~~~P~~f~lG~-g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~~~lV 76 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRT-----EDGVLVDESPVSAPLDYLHGH-GSLISGLETALEGHEVGDKFDVAVGANDAYGQYDENLV 76 (196)
T ss_dssp CCSSCEEEEEEEEEE-----TTTEEEEECCTTSCCEEESSS-SSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCCTTTC
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecCCCCCEEEEECC-CCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCChhhE
Confidence 678999999999982 47888987754 789999994 6899999999999999999999999666653
Q ss_pred ---------------------------------------------cccCCCceeEEEEEEEEeee
Q 009190 333 ---------------------------------------------QEHLRGVQAQFTVECRELFY 352 (540)
Q Consensus 333 ---------------------------------------------~~~laGk~v~F~VtVk~Ik~ 352 (540)
+..|||++++|+|+|.+|+.
T Consensus 77 ~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~vr~ 141 (196)
T 2kfw_A 77 QRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIRE 141 (196)
T ss_dssp EEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEEECCCCTTSCCCCEEEEEECCCBC
T ss_pred EEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEEEeCCCCCCCCeEEEEEEEEEeec
Confidence 24589999999999999874
No 32
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.03 E-value=7.8e-10 Score=100.40 Aligned_cols=87 Identities=14% Similarity=0.171 Sum_probs=76.2
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC-
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l- 336 (540)
.++.||.|+|+|+++. .+|+.|++.. ..++.|.+|. +.++|||+++|.||++|+++.|.++++..|+....
T Consensus 50 ~p~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-g~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~ 123 (144)
T 3o5e_A 50 TPMIGDKVYVHYKGKL-----SNGKKFDSSHDRNEPFVFSLGK-GQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSL 123 (144)
T ss_dssp CCCTTCEEEEEEEEEC-----TTSCEEEESGGGTSCEEEETTS-SSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBT
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEeecccCCCeEEEeCC-CcccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCCC
Confidence 4689999999999983 4788898764 3579999994 68999999999999999999999999999988776
Q ss_pred ----CCceeEEEEEEEEeee
Q 009190 337 ----RGVQAQFTVECRELFY 352 (540)
Q Consensus 337 ----aGk~v~F~VtVk~Ik~ 352 (540)
++.++.|+|+|++|+.
T Consensus 124 ~~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 124 PKIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp TTBCTTCCEEEEEEEEEEEC
T ss_pred CCcCCCCeEEEEEEEEEecC
Confidence 6889999999999973
No 33
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.00 E-value=2.7e-10 Score=104.34 Aligned_cols=66 Identities=12% Similarity=0.265 Sum_probs=56.9
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCC---------------cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEe
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE---------------TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRL 325 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~---------------~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v 325 (540)
++.||+|+++|+++. .+|+.|+++. .+++.|.+|. +.++|||+++|+||++|++++|.+
T Consensus 2 i~~gd~V~v~Y~g~~-----~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~-g~vi~G~eeaL~gm~~Ge~~~v~i 75 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKL-----ESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGE-GQLIQGFEEAVLDMEVGDEKTVKI 75 (151)
T ss_dssp CCTTCEEEECCEECC-----TTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTT-TCSCHHHHHHHHTCCTTCCCEEEE
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecchhhcccccccccccCCCCEEEEECC-CChhHHHHHHHcCCCCCCEEEEEE
Confidence 678999999999982 4788888763 2689999994 689999999999999999999999
Q ss_pred cCCCCcc
Q 009190 326 AFPESWR 332 (540)
Q Consensus 326 ~fPedy~ 332 (540)
+.+..|+
T Consensus 76 pp~~aYG 82 (151)
T 1ix5_A 76 PAEKAYG 82 (151)
T ss_dssp CTTTSSC
T ss_pred CcHHHCC
Confidence 9777775
No 34
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=98.99 E-value=1.1e-09 Score=103.15 Aligned_cols=92 Identities=13% Similarity=0.141 Sum_probs=75.9
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCC--CcCCeEEEecCCC-CCCcchHHhhcCCCCCceEEEEecCCCCcccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDA--ETKGFHFDTEDGD-KVLPGFLDSISGIQRGETKSFRLAFPESWRQE 334 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~--~~~~~~l~lg~~~-~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~ 334 (540)
+..++.||.|+|+|+++.. .+|+.|+++ ...++.|.+|. + .++|||+++|.||++|+++.|.++....|+..
T Consensus 61 G~~~~~Gd~V~v~Y~g~l~----~dG~~fdss~~~~~p~~f~lG~-g~~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~ 135 (180)
T 2f4e_A 61 GSKPSKYSTCFLHYRAWTK----NSQHKFEDTWHEQQPIELVLGK-EKKELAGLAIGVASMKSGERALVHVGWELAYGKE 135 (180)
T ss_dssp SCCBCTTCEEEEEEEEEET----TTCCEEEETTTTTCCEEEETTS-CCGGGHHHHHHHTTCCBTCEEEEEECGGGTTTTT
T ss_pred CCCCCCCCEEEEEEEEEEC----CCCcEEeccCccCCCEEEEeCC-CCchhHHHHHHHhCCCCCCEEEEEECchHhCCcC
Confidence 3568899999999999831 258888876 35789999994 5 79999999999999999999998755567655
Q ss_pred c-------CCCceeEEEEEEEEeeecC
Q 009190 335 H-------LRGVQAQFTVECRELFYRD 354 (540)
Q Consensus 335 ~-------laGk~v~F~VtVk~Ik~~~ 354 (540)
. .+|.++.|+|+|++|+...
T Consensus 136 g~~~~~~Ip~~s~l~F~VeL~~v~~~~ 162 (180)
T 2f4e_A 136 GNFSFPNVPPMADLLYEVEVIGFDETK 162 (180)
T ss_dssp CBSSSSCBCTTCCEEEEEEEEEESCBC
T ss_pred CcccCCCcCCCCeEEEEEEEEEEecCc
Confidence 4 3789999999999998754
No 35
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=98.96 E-value=1.6e-09 Score=105.43 Aligned_cols=86 Identities=15% Similarity=0.287 Sum_probs=75.3
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
++.++.||.|+|+|+++. .+|+.|+++.. .++.|.+| .+||||+++|.||++|++++|.++.+..|+...
T Consensus 133 G~~p~~gD~V~V~Y~g~l-----~dG~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g 204 (224)
T 1q6h_A 133 GEAPKDSDTVVVNYKGTL-----IDGKEFDNSYTRGEPLSFRLD---GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG 204 (224)
T ss_dssp SCCCCTTCEEEEEEEEEE-----TTSCEEEEGGGGTSCEEEEGG---GSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTC
T ss_pred CccccCCCEEEEEEEEEe-----CCCCEEeeccccCCCEEEEcC---CcchhHHHHHcCCCCCCEEEEEECchhhcCcCC
Confidence 345789999999999983 47888987643 68888885 599999999999999999999999888999888
Q ss_pred C----CCceeEEEEEEEEee
Q 009190 336 L----RGVQAQFTVECRELF 351 (540)
Q Consensus 336 l----aGk~v~F~VtVk~Ik 351 (540)
. +|.++.|+|+|++|+
T Consensus 205 ~~~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 205 VPGIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp BTTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCCCCEEEEEEEEEEeC
Confidence 8 899999999999984
No 36
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=98.95 E-value=2e-09 Score=99.07 Aligned_cols=87 Identities=13% Similarity=0.108 Sum_probs=73.7
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC---
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL--- 336 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l--- 336 (540)
.++.||.|+|+|+++. .+|+.|++ .+++.|.+|. +.++|||+++|.||++|++++|.++....|+...+
T Consensus 59 ~p~~gd~V~v~Y~g~l-----~dG~~fds--~~p~~f~lG~-g~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~ 130 (157)
T 2jwx_A 59 RPVKGQVVTVHLQTSL-----ENGTRVQE--EPELVFTLGD-CDVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSP 130 (157)
T ss_dssp CCCTTEEEEEEEEEEC-----TTSCEEEE--EEEEEEETTT-TSSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSS
T ss_pred CCCCCCEEEEEEEEEE-----CCCCEeec--CCCEEEEeCC-CChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCC
Confidence 5789999999999983 47888886 4789999994 68999999999999999999999865556776663
Q ss_pred ---CCceeEEEEEEEEeeecC
Q 009190 337 ---RGVQAQFTVECRELFYRD 354 (540)
Q Consensus 337 ---aGk~v~F~VtVk~Ik~~~ 354 (540)
+|.++.|+|+|++|+..+
T Consensus 131 ~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 131 YIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp CCCTTCCEEEEEEEEEEEECS
T ss_pred CcCCCCeEEEEEEEEEEEccc
Confidence 468999999999998754
No 37
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=98.94 E-value=1.8e-09 Score=104.22 Aligned_cols=87 Identities=13% Similarity=0.160 Sum_probs=75.2
Q ss_pred cCCcccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 258 DRGLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 258 dr~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
++.++.||.|+|+|+++. .+|+.|+++.. .++.|.+| .+||||+++|.||++|++++|.++++..|+...
T Consensus 118 G~~p~~gD~V~V~Y~g~l-----~dG~vfdss~~~g~p~~f~lg---~vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g 189 (213)
T 1fd9_A 118 GVKPGKSDTVTVEYTGRL-----IDGTVFDSTEKTGKPATFQVS---QVIPGWTEALQLMPAGSTWEIYVPSGLAYGPRS 189 (213)
T ss_dssp SCCCCTTCEEEEEEEEEE-----TTSCEEEEHHHHCSCEEEEGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTCC
T ss_pred CccCCCCCEEEEEEEEEE-----CCCCEEeeccccCCCEEEEcC---chhhHHHHHHcCCCCCCEEEEEECchhccCccC
Confidence 345789999999999983 47888987643 68888885 599999999999999999999999888998776
Q ss_pred C-----CCceeEEEEEEEEeee
Q 009190 336 L-----RGVQAQFTVECRELFY 352 (540)
Q Consensus 336 l-----aGk~v~F~VtVk~Ik~ 352 (540)
. +|.++.|+|+|++|++
T Consensus 190 ~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 190 VGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp CSSSCCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCCCCeEEEEEEEEEEEc
Confidence 4 7899999999999975
No 38
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=98.90 E-value=3.8e-09 Score=101.84 Aligned_cols=86 Identities=14% Similarity=0.249 Sum_probs=75.4
Q ss_pred CCcccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC
Q 009190 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL 336 (540)
Q Consensus 259 r~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l 336 (540)
..++.||.|+++|+++. .+|+.|++.. ..++.|.+|. +.++|||+++|.||++|++++|.++++..|+....
T Consensus 117 ~~~~~gd~V~v~Y~g~l-----~dG~~fdss~~~~~P~~f~lG~-g~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~ 190 (209)
T 3uf8_A 117 AEARAGQTVSVHYTGWL-----TDGQKFDSSKDRNDPFAFVLGG-GMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGA 190 (209)
T ss_dssp CBCCTTCEEEEEEEEEE-----TTSCEEEESGGGTCCEEEETTS-SSSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCB
T ss_pred CcCCCCCEEEEEEEEEE-----CCCCEEEEccccCCCEEEEeCC-CccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCC
Confidence 45889999999999983 4788888764 3679999995 67999999999999999999999999999988766
Q ss_pred -----CCceeEEEEEEEEe
Q 009190 337 -----RGVQAQFTVECREL 350 (540)
Q Consensus 337 -----aGk~v~F~VtVk~I 350 (540)
++.++.|+|+|.+|
T Consensus 191 ~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 191 AGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp TTTBCTTCCEEEEEEEEEC
T ss_pred CCCcCCCCeEEEEEEEEEC
Confidence 67899999999886
No 39
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.89 E-value=3.5e-09 Score=110.16 Aligned_cols=88 Identities=14% Similarity=0.243 Sum_probs=77.6
Q ss_pred CCcccccEEEEEEEEEeeccCCCCCcccCCCC---cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc
Q 009190 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAE---TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH 335 (540)
Q Consensus 259 r~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~---~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~ 335 (540)
+.++.||.|+|+|+++. .+|+.|+++. .+++.|.+|. +.++|||+++|.||++||+++|.++++.+|+...
T Consensus 258 ~~~~~gd~V~v~y~g~l-----~dG~~fd~~~~~~~~p~~f~~G~-g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~ 331 (356)
T 3jxv_A 258 ERPNEGAVVTVKITGKL-----QDGTVFLKKGHDEQEPFEFKTDE-EAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTE 331 (356)
T ss_dssp CCCCTTCEEEEEEEEEE-----SSSCEEEEESCTTSCCCEEETTT-TSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSC
T ss_pred CCCCCCCEEEEEEEEEE-----CCCCEEeeccccCCcCEEEEECC-CccchHHHHHHhCCCCCCEEEEEEChHHccCCCC
Confidence 46889999999999983 4788887653 5789999994 6899999999999999999999999999998765
Q ss_pred -------CCCceeEEEEEEEEeee
Q 009190 336 -------LRGVQAQFTVECRELFY 352 (540)
Q Consensus 336 -------laGk~v~F~VtVk~Ik~ 352 (540)
.+|.++.|+|++++|++
T Consensus 332 ~~~~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 332 SKQDAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EESSSEECTTCCEEEEEEEEEEEC
T ss_pred cCCCCcCCcCCeEEEEEEEEEEEc
Confidence 48999999999999974
No 40
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=98.85 E-value=7e-09 Score=100.31 Aligned_cols=85 Identities=11% Similarity=0.140 Sum_probs=75.7
Q ss_pred CCcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccCCC
Q 009190 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRG 338 (540)
Q Consensus 259 r~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laG 338 (540)
..+..||.|+|+|+++. .+|+.|+++ ..++.|.+| .+||||+++|.||++|++++|.++.+..|+.....+
T Consensus 130 ~~p~~gd~V~V~Y~g~l-----~dG~vfDss-~~P~~f~lG---~vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~~~ 200 (219)
T 3oe2_A 130 PKPDANGRVEVRYVGRL-----PDGKIFDQS-TQPQWFRLD---SVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGD 200 (219)
T ss_dssp CCCCTTSEEEEEEEEEC-----TTSCEEEEC-SSCEEEEGG---GSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred ccCCCCCEEEEEEEEEE-----CCCCEeecc-CCcEEEEec---chhHHHHHHHhCCCCCCEEEEEECchhcCCCCCCCC
Confidence 45789999999999983 578899887 788999887 599999999999999999999999999999887766
Q ss_pred -----ceeEEEEEEEEeee
Q 009190 339 -----VQAQFTVECRELFY 352 (540)
Q Consensus 339 -----k~v~F~VtVk~Ik~ 352 (540)
.++.|+|+|.+|++
T Consensus 201 ~IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 201 LIDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp TBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCeEEEEEEEEEEeC
Confidence 89999999999974
No 41
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.84 E-value=4.3e-09 Score=105.88 Aligned_cols=85 Identities=11% Similarity=0.191 Sum_probs=69.9
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCCC---CCcchHHhhcCCCCCceEEEEecCCCCcccc--
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGDK---VLPGFLDSISGIQRGETKSFRLAFPESWRQE-- 334 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~~---~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~-- 334 (540)
+++.||.|+|||+++ .+|+.|++ .++.|.+|. +. ++|||+++|+||++||+++|.++-.-.|...
T Consensus 183 ~~~~gd~V~i~y~g~------~dG~~fd~---~~~~f~lG~-g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~ 252 (280)
T 1q1c_A 183 KPNEGAIVEVALEGY------YKDKLFDQ---RELRFEIGE-GENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGK 252 (280)
T ss_dssp CCCTTCEEEEEEEEE------ETTEEEEE---EEEEEETTC-GGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCB
T ss_pred cccCCceEEEEEEEE------eCCEEEec---CCeEEEecC-CcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCC
Confidence 478999999999998 46888886 589999995 44 5999999999999999999888422245543
Q ss_pred -cC---CCceeEEEEEEEEeeecC
Q 009190 335 -HL---RGVQAQFTVECRELFYRD 354 (540)
Q Consensus 335 -~l---aGk~v~F~VtVk~Ik~~~ 354 (540)
.+ +|+++.|+|+|++|++..
T Consensus 253 ~~~~IP~~~~l~f~V~L~~i~~~~ 276 (280)
T 1q1c_A 253 EKFQIPPNAELKYELHLKSFEKAK 276 (280)
T ss_dssp GGGTBCTTCCEEEEEEEEEEECCC
T ss_pred ccCccCCCCeEEEEEEEEEEeCCC
Confidence 36 899999999999998653
No 42
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.82 E-value=5.3e-09 Score=107.36 Aligned_cols=91 Identities=13% Similarity=0.127 Sum_probs=77.7
Q ss_pred CCcccccEEEEEEEEEeeccCCCCCcccCCC--CcCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC
Q 009190 259 RGLQVGDIAIVDISATTIDEDESNVQNIPDA--ETKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL 336 (540)
Q Consensus 259 r~~~~GD~V~id~~~~~~d~d~~~G~~~~~~--~~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l 336 (540)
..+..||.|+|||+|+.. .+|+.|+++ ..+++.|.+|.+..+||||+++|.||++|++++|.++++..|+....
T Consensus 62 ~~~~~gd~v~v~y~g~~~----~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~ 137 (338)
T 2if4_A 62 SKPSKYSTCFLHYRAWTK----NSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVASMKSGERALVHVGWELAYGKEGN 137 (338)
T ss_dssp CCCCTTCEEEEEEEEEET----TTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCC
T ss_pred CCCCCCCEEEEEEEEEEc----CCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCC
Confidence 457899999999999831 258889875 45789999995327999999999999999999999999999988776
Q ss_pred -------CCceeEEEEEEEEeeec
Q 009190 337 -------RGVQAQFTVECRELFYR 353 (540)
Q Consensus 337 -------aGk~v~F~VtVk~Ik~~ 353 (540)
.+.++.|.|++..+...
T Consensus 138 ~~~~~ip~~~~l~f~v~L~~~~~~ 161 (338)
T 2if4_A 138 FSFPNVPPMADLLYEVEVIGFDET 161 (338)
T ss_dssp CSSSCCCTTCCEEEEEEEEEEECC
T ss_pred CCCCCCCCCCcEEEEEEEEEecCC
Confidence 68899999999999863
No 43
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=98.78 E-value=1.8e-08 Score=101.31 Aligned_cols=90 Identities=18% Similarity=0.176 Sum_probs=77.5
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCccccc---
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEH--- 335 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~--- 335 (540)
++.||.|+|+|+++. .+|+.|+++. ..++.|.+|. +.++|||+++|.||++|++++|.++.+..|....
T Consensus 67 ~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~f~lG~-g~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~~ 140 (280)
T 1q1c_A 67 PMIGDRVFVHYTGWL-----LDGTKFDSSLDRKDKFSFDLGK-GEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP 140 (280)
T ss_dssp CCTTCEEEEEEEEEE-----TTSCEEEESTTSSSCEEEETTT-TSSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEEecccCCCCEEEEECC-cChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCccC
Confidence 788999999999983 4788888764 3689999994 6899999999999999999999998777888655
Q ss_pred --CCCceeEEEEEEEEeeecCCC
Q 009190 336 --LRGVQAQFTVECRELFYRDLP 356 (540)
Q Consensus 336 --laGk~v~F~VtVk~Ik~~~lP 356 (540)
.++.++.|+|++.+|+...+.
T Consensus 141 ~Ip~~~~lvf~Vel~~i~~~~~~ 163 (280)
T 1q1c_A 141 KIPPNATLVFEVELFEFKGEDLT 163 (280)
T ss_dssp TBCTTCCEEEEEEEEEEECEECC
T ss_pred CCCCCCcEEEEEEeeeecccccc
Confidence 688999999999999876444
No 44
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.78 E-value=8.9e-09 Score=110.10 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=75.9
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccC--
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL-- 336 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l-- 336 (540)
++.||.|+|+|+++. .+|+.|+++. ..++.|.+|. +.++|||+++|.||++|++++|.++++..|+....
T Consensus 47 ~~~gd~v~v~y~~~~-----~~g~~~dss~~~~~p~~~~~g~-~~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~ 120 (457)
T 1kt0_A 47 PMIGDKVYVHYKGKL-----SNGKKFDSSHDRNEPFVFSLGK-GQVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLP 120 (457)
T ss_dssp CCBTCEEEEEEEEEC----------CBC------CEEEETTS-TTSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTT
T ss_pred CCCCCEEEEEEEEEE-----CCCCEEeccCCCCCCeEEEeCC-cchhhHHHHHHhhCCCCCEEEEEEChHHhccccCCCC
Confidence 789999999999983 4788998853 3689999995 68999999999999999999999998889986654
Q ss_pred ---CCceeEEEEEEEEeeecCCCCCChHHHhh
Q 009190 337 ---RGVQAQFTVECRELFYRDLPKLDDSLAGK 365 (540)
Q Consensus 337 ---aGk~v~F~VtVk~Ik~~~lPELdDEfak~ 365 (540)
+|.++.|+|++.+|+...++ .|..++++
T Consensus 121 ~i~~~~~l~~~v~l~~~~~~~~~-~dg~~~k~ 151 (457)
T 1kt0_A 121 KIPSNATLFFEIELLDFKGEDLF-EDGGIIRR 151 (457)
T ss_dssp TBCTTCCEEEEEEEEEEECEETT-SSSSEEEE
T ss_pred CCCCCCcEEEEEeeceeeccccc-CCcceEEE
Confidence 78999999999999876554 34445544
No 45
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=98.55 E-value=4.5e-09 Score=109.29 Aligned_cols=101 Identities=19% Similarity=0.242 Sum_probs=11.9
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCc--CCeEEEecCCCCCCcchHHhhcCCCCCceEEEEecCCCCcccccCC
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAET--KGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLR 337 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~--~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~la 337 (540)
.++.||.|+++|+++. .+|+.|+++.. +++.|.+|. +.++|||+++|.||++|+++.|.++++..|+.....
T Consensus 26 ~~~~gd~V~v~Y~g~~-----~dG~~fdss~~~~~p~~~~lG~-g~~i~g~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~ 99 (356)
T 3jxv_A 26 TPEVGDEVEVHYTGTL-----LDGKKFDSSRDRDDTFKFKLGQ-GQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSP 99 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCEEEEEEEEEE-----CCCCEEEEcccCCCcEEEEeCC-CccchHHHHHHhcCCCCCEEEEEEChHHhCCCCCCC
Confidence 4789999999999983 47888988654 689999994 689999999999999999999999999999987776
Q ss_pred -----CceeEEEEEEEEeeecCCCCCChHHHhhh
Q 009190 338 -----GVQAQFTVECRELFYRDLPKLDDSLAGKL 366 (540)
Q Consensus 338 -----Gk~v~F~VtVk~Ik~~~lPELdDEfak~l 366 (540)
+.++.|+|++.+++...-...|+.+++++
T Consensus 100 ~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i 133 (356)
T 3jxv_A 100 PTIPANATLQFDVELLSWTSVRDIAKDGGIFKKI 133 (356)
T ss_dssp ------------------CCEEETTSSSSEEEEE
T ss_pred CCcCCCCEEEEEeeEEeeecccccccCceeEEEE
Confidence 78999999999998766666778888776
No 46
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=98.50 E-value=1.6e-07 Score=86.92 Aligned_cols=62 Identities=18% Similarity=0.192 Sum_probs=53.5
Q ss_pred cccccEEEEEEEEEeeccCCCCCcccCCCC--cCCeEEEecCCCCCCcchHHhhcCCCCCceEEEEec
Q 009190 261 LQVGDIAIVDISATTIDEDESNVQNIPDAE--TKGFHFDTEDGDKVLPGFLDSISGIQRGETKSFRLA 326 (540)
Q Consensus 261 ~~~GD~V~id~~~~~~d~d~~~G~~~~~~~--~~~~~l~lg~~~~~ip~fe~~LiG~k~Ge~~~~~v~ 326 (540)
+..||.|+++|+|+..| .+|+.|+++. .++|.|.+|. +.+||||+++|.||++|+++.|.++
T Consensus 27 ~~~G~~V~vhY~g~l~d---~~G~~FDsS~~rg~P~~f~lG~-g~vI~Gwd~gl~~M~~Ge~~~~~ip 90 (165)
T 2lkn_A 27 FQDGTKATFHYRTLHSD---DEGTVLDDSRARGKPMELIIGK-KFKLPVWETIVCTMREGEIAQFLCD 90 (165)
T ss_dssp CCTTCEEEEECEEECSS---SSCCEEEESTTTTCCEEEESSS-SCSCSHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCCEEEEEEEEEEeC---CCccEEEecccCCCCEEEEecC-CCccHHHHHHHhcCccCceEEEEEC
Confidence 57899999999998544 4688898764 3689999995 6899999999999999999999886
No 47
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=95.43 E-value=0.034 Score=56.20 Aligned_cols=84 Identities=12% Similarity=0.189 Sum_probs=62.3
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCCC--CCCcchHHhhcCCCCCceEEEEecCCCCccccc--
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDGD--KVLPGFLDSISGIQRGETKSFRLAFPESWRQEH-- 335 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~~--~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~-- 335 (540)
....||.|+|+|+|+ .+|..|+.. ++.|.+|.+. ..+++|+.+|.+|++|+...+.+..-..|....
T Consensus 40 ~p~~~~~v~v~y~g~------~~g~~fd~~---~~~f~lG~g~~~~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~ 110 (336)
T 1p5q_A 40 KPNEGAIVEVALEGY------YKDKLFDQR---ELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKE 110 (336)
T ss_dssp CCCTTCEEEEEEEEE------ETTEEEEEE---EEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBG
T ss_pred CCCCCCeEEEEEEEE------ECCEEEecC---CeEEEeCCCCccccchHHHHHHhcCCCCCeEEEEECCccccCcCCCC
Confidence 356899999999998 357777753 6889888532 258999999999999999999985322343322
Q ss_pred ----CCCceeEEEEEEEEeee
Q 009190 336 ----LRGVQAQFTVECRELFY 352 (540)
Q Consensus 336 ----laGk~v~F~VtVk~Ik~ 352 (540)
-.+....|.+.++.+.+
T Consensus 111 ~~~i~~~~~l~f~~~L~~~~~ 131 (336)
T 1p5q_A 111 KFQIPPNAELKYELHLKSFEK 131 (336)
T ss_dssp GGTBCSSCCEEEEEEEEEEEC
T ss_pred ccCCCCCCeEEEEEEEeeccc
Confidence 12345789999998875
No 48
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=92.36 E-value=1.5 Score=42.19 Aligned_cols=109 Identities=14% Similarity=0.114 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcC--Ch
Q 009190 372 TIEQVKETLLQKCREVEQTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALS--SP 449 (540)
Q Consensus 372 tleelk~~Ire~l~~~~~~~~~~~~~~~il~~L~e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~--~~ 449 (540)
|..+|...++... ...+...++.+.+.++.+-.+...+.+++.-|++.+.++. .++|++.++|...- .+
T Consensus 13 t~~el~~~~~~~~-~~~~~vL~~LI~~~ll~q~A~~~gi~vsd~ev~~~i~~~~--------~~~~~s~~~~~~~L~~~g 83 (252)
T 3rgc_A 13 TTYDIDQTMKALK-IDRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKML--------AQNKTTLNAFKANLKSKN 83 (252)
T ss_dssp EHHHHHHHHHHHT-CC-CHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH--------HHTTCCHHHHHHHTCC--
T ss_pred cHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH--------HHcCCCHHHHHHHHHHcC
Confidence 4555555444321 0134556777888899999999999999999988776542 24567877765431 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCC-CCHHHHHHHHHHHH
Q 009190 450 KAVKEFLENQRENITNVIKQNLAVGDIFKR---ENLQ-FSTEDLVKEVENSI 497 (540)
Q Consensus 450 ~~~ee~~e~~~~~a~~~vK~~Lil~~Ia~~---enI~-VseeEi~~ei~~~~ 497 (540)
-+.++|+ ..++..|++.++... .+|. ||++|++++++...
T Consensus 84 ~t~~~~~--------~~ir~~l~~~~l~~~~~~~~v~vvtd~ei~~yy~~~~ 127 (252)
T 3rgc_A 84 QSYEQFR--------TNFKKDLEKRKLYEKIASMAKTDFSDDGAKKFFEQNK 127 (252)
T ss_dssp -CHHHHH--------HHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHHHTCG
T ss_pred CCHHHHH--------HHHHHHHHHHHHHHHHHhccCccCCHHHHHHHHHhCH
Confidence 2334443 334455555555443 3688 69999999987643
No 49
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=90.60 E-value=0.46 Score=49.96 Aligned_cols=84 Identities=11% Similarity=0.140 Sum_probs=61.1
Q ss_pred CcccccEEEEEEEEEeeccCCCCCcccCCCCcCCeEEEecCC--CCCCcchHHhhcCCCCCceEEEEecCCCCcccccC-
Q 009190 260 GLQVGDIAIVDISATTIDEDESNVQNIPDAETKGFHFDTEDG--DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHL- 336 (540)
Q Consensus 260 ~~~~GD~V~id~~~~~~d~d~~~G~~~~~~~~~~~~l~lg~~--~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~l- 336 (540)
....||.|+++|+|. .+|..|+. .++.|.+|.+ ..++++++.++.+|+.|+...+.+..--.|.....
T Consensus 161 ~p~~g~~V~v~y~g~------~~g~~f~~---~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~ 231 (457)
T 1kt0_A 161 NPNEGATVEIHLEGR------CGGRMFDC---RDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKP 231 (457)
T ss_dssp CCCTTCEEEEEEEEE------ETTEEEEE---EEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBG
T ss_pred CCCCCCEEEEEEEEE------eCCeEEec---CceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCc
Confidence 467899999999998 35666764 4588888843 24788999999999999999998863223433221
Q ss_pred -----CCceeEEEEEEEEeee
Q 009190 337 -----RGVQAQFTVECRELFY 352 (540)
Q Consensus 337 -----aGk~v~F~VtVk~Ik~ 352 (540)
.+..+.|.+.+....+
T Consensus 232 ~~~ip~~~~l~y~~~l~~~~~ 252 (457)
T 1kt0_A 232 KFGIEPNAELIYEVTLKSFEK 252 (457)
T ss_dssp GGTBCTTCCEEEEEEEEEEEC
T ss_pred ccCCCCCCEEEEEhhhhhccc
Confidence 1245688888887765
No 50
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=87.87 E-value=2.8 Score=43.19 Aligned_cols=98 Identities=5% Similarity=0.050 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcC--ChhHHHHHHHHHHHHHHHHH
Q 009190 390 TAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALS--SPKAVKEFLENQRENITNVI 467 (540)
Q Consensus 390 ~~~~~~~~~~il~~L~e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~--~~~~~ee~~e~~~~~a~~~v 467 (540)
...++.+.+.++.+-.+...+.+++..|++.+..+.. ..|++.++|...- .+-+.+.|.+. .++.+
T Consensus 49 ~vl~~LI~~~ll~q~A~~~gi~vs~~ev~~~i~~~~~--------~~~~~~~~~~~~L~~~g~t~~~~~~~----~r~~l 116 (408)
T 1m5y_A 49 QIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAK--------QNNMTLDQMRSRLAYDGLNYNTYRNQ----IRKEM 116 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH--------HTTCCHHHHHHHHHHHTCCHHHHHHH----HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHH--------HcCCCHHHHHHHHHHcCCCHHHHHHH----HHHHH
Confidence 3445566677777888888999999988877665432 2467776654320 11123333322 22233
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 009190 468 KQNLAVGDIFKRENLQFSTEDLVKEVENSIAEL 500 (540)
Q Consensus 468 K~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~ 500 (540)
.+.-++..+.. .++.||++|++++++....+|
T Consensus 117 ~~~~l~~~~~~-~~~~vsd~ei~~~y~~~~~~~ 148 (408)
T 1m5y_A 117 IISEVRNNEVR-RRITILPQEVESLAQQVGNQN 148 (408)
T ss_dssp HHHHHHHHHHH-HTCCCCTTHHHHHHHCC----
T ss_pred HHHHHHHHHhc-CCCCCCHHHHHHHHHhhhhhc
Confidence 33333333332 368999999999887655443
No 51
>3rgc_A Possible periplasmic protein; ppiase, chaperone; 2.30A {Campylobacter jejuni}
Probab=87.84 E-value=1.6 Score=41.95 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH----Hhh-----hhccHHHHHHHHHHHHHHHHHHHHHHHh
Q 009190 462 NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELK----QQK-----QEYDEDRVREQVIDILEGAKVLEWLREH 532 (540)
Q Consensus 462 ~a~~~vK~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~----~~~-----~~~~~~~~~~~i~~~l~~~Kvld~L~e~ 532 (540)
++...+-..-++..-|++.||.||+++|++.+.++..++. .+. +.++.+.+++.++..++.+++++.+...
T Consensus 30 ~vL~~LI~~~ll~q~A~~~gi~vsd~ev~~~i~~~~~~~~~s~~~~~~~L~~~g~t~~~~~~~ir~~l~~~~l~~~~~~~ 109 (252)
T 3rgc_A 30 KALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNKTTLNAFKANLKSKNQSYEQFRTNFKKDLEKRKLYEKIASM 109 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCHHHHHHHTCC---CHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444555556667778889999999999999988765432 111 1245677888899999999999877664
Q ss_pred C
Q 009190 533 A 533 (540)
Q Consensus 533 a 533 (540)
.
T Consensus 110 ~ 110 (252)
T 3rgc_A 110 A 110 (252)
T ss_dssp S
T ss_pred c
Confidence 3
No 52
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=86.88 E-value=4.3 Score=40.75 Aligned_cols=96 Identities=10% Similarity=0.120 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcC---ChhHHHHHHHHHHHHHHH
Q 009190 389 QTAKDQATDNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALS---SPKAVKEFLENQRENITN 465 (540)
Q Consensus 389 ~~~~~~~~~~~il~~L~e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~---~~~~~ee~~e~~~~~a~~ 465 (540)
....++.+.+.++.+-.+...+.+++.-|++.+.+.+.. .++++.++|...- .+-+.++| +.
T Consensus 55 ~~vL~~LI~~~ll~q~A~~~gi~vsd~ev~~~i~~~~~~-------~~~~~~~~~~~~L~~~~g~t~~~~--------~~ 119 (325)
T 3nrk_A 55 TRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEV-------MGITNRKQFEKTMETSSGMPFELW--------VT 119 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH-------HCCCCHHHHHHHHHHHHCSCHHHH--------GG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHH-------hcCCCHHHHHHHHHHHcCCCHHHH--------HH
Confidence 344556677788888888889999999999877762211 1245554443210 01122223 23
Q ss_pred HHHHHHHHHHHHHhcCCCC---CHHHHHHHHHHHHHHH
Q 009190 466 VIKQNLAVGDIFKRENLQF---STEDLVKEVENSIAEL 500 (540)
Q Consensus 466 ~vK~~Lil~~Ia~~enI~V---seeEi~~ei~~~~~~~ 500 (540)
.++..|+..++.. .++.| |++||.++++.....|
T Consensus 120 ~lr~~l~~~~lv~-~~v~v~~Ptd~ei~~yy~~~~~~~ 156 (325)
T 3nrk_A 120 ELPYQIKKGQLLQ-LKIAVPPPNEQEIRSWYNQNKDKV 156 (325)
T ss_dssp GHHHHHHHHHHHH-HTCCCCCCCHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHH-ccCCCCCCCHHHHHHHHHHhhhhc
Confidence 3444555555443 37899 9999999998866554
No 53
>1m5y_A SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli} SCOP: a.223.1.2 d.26.1.1 d.26.1.1 PDB: 2pv3_A
Probab=83.74 E-value=7.1 Score=40.03 Aligned_cols=78 Identities=13% Similarity=0.135 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH-------HHHh--hhhccHHHHHHHHHHHHHHHHHHHHH
Q 009190 459 QRENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAE-------LKQQ--KQEYDEDRVREQVIDILEGAKVLEWL 529 (540)
Q Consensus 459 ~~~~a~~~vK~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~-------~~~~--~~~~~~~~~~~~i~~~l~~~Kvld~L 529 (540)
++.++.+.+-..-++..-|++.||.||+++|++.+..+..+ |..+ ...++.+.+++.++..++.+++...+
T Consensus 46 ~~~~vl~~LI~~~ll~q~A~~~gi~vs~~ev~~~i~~~~~~~~~~~~~~~~~L~~~g~t~~~~~~~~r~~l~~~~l~~~~ 125 (408)
T 1m5y_A 46 LRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNE 125 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666667777777899999999999999998876543 1111 01135566777788888888887765
Q ss_pred HHh-Ceee
Q 009190 530 REH-AEIQ 536 (540)
Q Consensus 530 ~e~-aki~ 536 (540)
... +.|+
T Consensus 126 ~~~~~~vs 133 (408)
T 1m5y_A 126 VRRRITIL 133 (408)
T ss_dssp HHHTCCCC
T ss_pred hcCCCCCC
Confidence 543 4443
No 54
>3nrk_A LIC12922; NC domain, parvulin domain, SURA homology, probable chaperon unknown function; 3.10A {Leptospira interrogans serovar copenhaorganism_taxid}
Probab=80.67 E-value=3.4 Score=41.52 Aligned_cols=74 Identities=11% Similarity=0.142 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHHH-------HHHh--h-hhccHHHHHHHHHHHHHHHHHHH
Q 009190 459 QRENITNVIKQNLAVGDIFKRENLQFSTEDLVKEVEN-SIAE-------LKQQ--K-QEYDEDRVREQVIDILEGAKVLE 527 (540)
Q Consensus 459 ~~~~a~~~vK~~Lil~~Ia~~enI~VseeEi~~ei~~-~~~~-------~~~~--~-~~~~~~~~~~~i~~~l~~~Kvld 527 (540)
++.++...+-..-++..-|++.||.||+++|++.+.+ +..+ |..+ . ..++.+.+++.++..++.+++
T Consensus 53 ~~~~vL~~LI~~~ll~q~A~~~gi~vsd~ev~~~i~~~~~~~~~~~~~~~~~~L~~~~g~t~~~~~~~lr~~l~~~~l-- 130 (325)
T 3nrk_A 53 FRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQL-- 130 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCSCHHHHGGGHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH--
Confidence 3455666666666777778999999999999999988 5432 1111 0 123556677778888877776
Q ss_pred HHHHhCee
Q 009190 528 WLREHAEI 535 (540)
Q Consensus 528 ~L~e~aki 535 (540)
+...++|
T Consensus 131 -v~~~v~v 137 (325)
T 3nrk_A 131 -LQLKIAV 137 (325)
T ss_dssp -HHHTCCC
T ss_pred -HHccCCC
Confidence 4455555
No 55
>1te7_A Hypothetical UPF0267 protein YQFB; alpha + beta, structural genomics, PSI, protein structure initiative; NMR {Escherichia coli} SCOP: b.122.1.7
Probab=75.26 E-value=12 Score=31.10 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=34.4
Q ss_pred eeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHH
Q 009190 340 QAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQ 382 (540)
Q Consensus 340 ~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire 382 (540)
...+.++|.+|....+-+++|++|..= |+ |+++||+.+++
T Consensus 48 ~~~~~i~vt~V~~~~~~eitee~A~~E--G~-sl~~~~~~~~~ 87 (103)
T 1te7_A 48 GYFCTIEVTATSTVTLDTLTEKHAEQE--NM-TLTELKKVIAD 87 (103)
T ss_dssp EEEEEEEEEEEEEECSTTTSTHHHHHT--TS-CHHHHHHHHHH
T ss_pred cEEEEEEEEEEEEEcHHHhCHHHHHHc--CC-CHHHHHHHHHH
Confidence 356789999999999999999999965 55 99999998876
No 56
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=71.72 E-value=20 Score=32.02 Aligned_cols=32 Identities=16% Similarity=0.277 Sum_probs=24.5
Q ss_pred chHHhhcCCCCCceEEEEecCCCCcccccCCCceeEEEEEEEEee
Q 009190 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELF 351 (540)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik 351 (540)
.+-.+|+|+++||++++.+ |. | ..+++|.+|.
T Consensus 124 PlG~ALlGk~~GD~v~~~~--p~--------G---~~~~~I~~I~ 155 (156)
T 2f23_A 124 PMGKALLGHRVGDVLSLDT--PK--------G---KREFRVVAIH 155 (156)
T ss_dssp HHHHHHTTCCTTCEEEEEE--TT--------E---EEEEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------C---cEEEEEEEEE
Confidence 4789999999999988877 32 3 2467777775
No 57
>2nsa_A Trigger factor, TF; chaperone; 1.70A {Thermotoga maritima}
Probab=63.80 E-value=14 Score=33.08 Aligned_cols=68 Identities=18% Similarity=0.298 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhh-------cc----HHHHHHHHHHHHHHHHHHHHHHHhCeee
Q 009190 469 QNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQKQE-------YD----EDRVREQVIDILEGAKVLEWLREHAEIQ 536 (540)
Q Consensus 469 ~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~~~~~~-------~~----~~~~~~~i~~~l~~~Kvld~L~e~aki~ 536 (540)
..=++++|++.-++.+-+.+++..+..+..++...|.. .+ .+.+++++...+...-+++-|.+..+|+
T Consensus 30 ~~~vld~l~e~~~~~lve~e~~~~~~~~~~~l~~~g~~~~~~~~~~~~e~~~e~~~~~A~~~vk~~lil~~ia~~e~I~ 108 (170)
T 2nsa_A 30 REQLLEKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGIS 108 (170)
T ss_dssp HHHHHHHGGGGCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHcCCCHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 34467889998889888888888887776666555532 13 2344555566666677777776665543
No 58
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=52.25 E-value=78 Score=32.89 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-h---hh---hccHHHHHHHHHHHHHHHHHHHHHHHhCeee
Q 009190 467 IKQNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQ-Q---KQ---EYDEDRVREQVIDILEGAKVLEWLREHAEIQ 536 (540)
Q Consensus 467 vK~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~~-~---~~---~~~~~~~~~~i~~~l~~~Kvld~L~e~aki~ 536 (540)
-...-+++++.+...+.+.+.=|+++++.+..++.+ + |. .+..+.+++.....+...-+++-|.+..+|+
T Consensus 285 ~~~~~v~~~l~e~~~~~lP~~lv~~e~~~~~~~~~~~l~~~g~~~~~~~~e~~~~~Ae~~vk~~Lil~~Ia~~e~i~ 361 (432)
T 1w26_A 285 RVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELK 361 (432)
T ss_dssp HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHTTTTCCTTSSTTSCGGGTHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345557899999999999999999999988877542 1 21 1112334666666667777777777666554
No 59
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=52.19 E-value=18 Score=31.56 Aligned_cols=34 Identities=29% Similarity=0.489 Sum_probs=26.7
Q ss_pred chHHhhcCCCCCceEEEEecCCCCcccccCCCceeEEEEEEEEeee
Q 009190 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFY 352 (540)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik~ 352 (540)
.+-.+|+|+++||++++.+ |. |+ ..+++|.+|..
T Consensus 93 PlG~ALlGk~~GD~v~v~~--p~--------G~--~~~~~I~~I~~ 126 (136)
T 3bmb_A 93 PVGAALLGLRVGDSIHWEL--PG--------GV--ATHLEVLELEY 126 (136)
T ss_dssp HHHHHHTTCBTTCEEEEEE--TT--------TE--EEEEEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------CC--EEEEEEEEEEe
Confidence 4789999999999998877 33 43 36778889885
No 60
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=51.72 E-value=68 Score=30.26 Aligned_cols=37 Identities=8% Similarity=0.145 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Q 009190 462 NITNVIKQNLAVGDIFKRENLQFSTEDLVKEVENSIAEL 500 (540)
Q Consensus 462 ~a~~~vK~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~ 500 (540)
.+++.+-+...++.+.. ++.||++|+.++++.....|
T Consensus 71 ~~r~~l~~~~~~~~~~~--~~~vtd~ei~~~Y~~~~~~f 107 (252)
T 3rfw_A 71 RAKDAILVNVYQEKILN--TIKIDAAKVKAFYDQNKDKY 107 (252)
T ss_dssp HHHHHHHHHHHHHHHHT--TCCCCHHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHHHHHhc--cCCCCHHHHHHHHHHhHHhc
Confidence 44555556666777763 79999999999988765443
No 61
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=47.97 E-value=17 Score=32.54 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=20.9
Q ss_pred chHHhhcCCCCCceEEEEecCCCCcccccCCCceeEEEEEEEEee
Q 009190 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELF 351 (540)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik 351 (540)
.+-.+|+|+++||++++.+ |. |. .+++|.+|.
T Consensus 125 PlG~ALlGk~~GD~v~v~~--p~--------G~---~~~~I~~I~ 156 (158)
T 1grj_A 125 PIARGLIGKEEDDVVVIKT--PG--------GE---VEFEVIKVE 156 (158)
T ss_dssp HHHHHHTTCBTTCEECC-------------------CCEEEEEEE
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------Cc---EEEEEEEEE
Confidence 4789999999999877665 43 42 356777775
No 62
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=47.11 E-value=20 Score=32.11 Aligned_cols=33 Identities=12% Similarity=0.161 Sum_probs=26.2
Q ss_pred chHHhhcCCCCCceEEEEecCCCCcccccCCCceeEEEEEEEEeee
Q 009190 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFY 352 (540)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik~ 352 (540)
.+-.+|+|+++||++++.+ |. |. .+++|.+|..
T Consensus 123 Plg~ALlGk~vGD~v~v~~--P~--------G~---~~~~I~~I~~ 155 (158)
T 2p4v_A 123 PMARALLKKEVGDLAVVNT--PA--------GE---ASWYVNAIEY 155 (158)
T ss_dssp HHHHHSTTCCTTCEEEEEC--SS--------CE---EEEEEEEEEC
T ss_pred HHHHHhcCCCCCCEEEEEc--CC--------Cc---EEEEEEEEEe
Confidence 5789999999999988776 43 42 6788888874
No 63
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=45.04 E-value=20 Score=31.46 Aligned_cols=34 Identities=21% Similarity=0.365 Sum_probs=26.5
Q ss_pred chHHhhcCCCCCceEEEEecCCCCcccccCCCceeEEEEEEEEeee
Q 009190 307 GFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECRELFY 352 (540)
Q Consensus 307 ~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik~ 352 (540)
.+-.+|+|+++||++++.+ |. |+. .+++|.+|..
T Consensus 96 PlG~ALlGk~vGD~v~v~~--P~--------G~~--~~~~I~~I~~ 129 (141)
T 2pn0_A 96 PVGSALLGLAQGDEIEWPK--PG--------GGV--LRVRIVEVTY 129 (141)
T ss_dssp TTHHHHTTCBTTCEEEEEC--TT--------SSE--EEEEEEEEEC
T ss_pred HHHHHHcCCCCCCEEEEEc--CC--------CCE--EEEEEEEEEe
Confidence 4789999999999988876 43 433 6778888874
No 64
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=41.64 E-value=1.2e+02 Score=31.56 Aligned_cols=68 Identities=21% Similarity=0.373 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh------hhc-cHH----HHHHHHHHHHHHHHHHHHHHHhCeee
Q 009190 469 QNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQQK------QEY-DED----RVREQVIDILEGAKVLEWLREHAEIQ 536 (540)
Q Consensus 469 ~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~~~~------~~~-~~~----~~~~~i~~~l~~~Kvld~L~e~aki~ 536 (540)
..-+++++.+...+.+.+.-|+.++..+..++.+.+ +.+ ..+ .++++....+...-+++-|.+.-+|+
T Consensus 272 ~~~v~~~l~e~~~~~lP~~lv~~e~~~~~~~l~~q~~~~~~l~~~~~~e~~~e~~~~~Ae~~vk~~Lil~~Ia~~e~I~ 350 (433)
T 3gty_X 272 REQLLEKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGIS 350 (433)
T ss_dssp HHHHHHTHHHHCEEECCHHHHHHHHHHHHHHHHTTTHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 345788999999999999999988887765543211 111 122 34445556666677777777766654
No 65
>3rfw_A Cell-binding factor 2; SURA-like, chaperone; 2.20A {Campylobacter jejuni}
Probab=38.46 E-value=33 Score=32.52 Aligned_cols=79 Identities=11% Similarity=0.152 Sum_probs=52.2
Q ss_pred CCCCcchHHhhcCCCCCceEE--EEecCCCCcccccCCCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHH
Q 009190 302 DKVLPGFLDSISGIQRGETKS--FRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKET 379 (540)
Q Consensus 302 ~~~ip~fe~~LiG~k~Ge~~~--~~v~fPedy~~~~laGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~ 379 (540)
+.+.|.|.+.+-++++|+... |... ..| .-|.|.+++.. ...+.++.|..
T Consensus 171 ~~l~~~f~~a~~~l~~G~is~~pv~t~--~G~-----------hii~v~~~~~~---------------~~~~~e~vk~~ 222 (252)
T 3rfw_A 171 STMVKPFTDAAFALKNGTITTTPVKTN--FGY-----------HVILKENSQAK---------------GQIKFDEVKQG 222 (252)
T ss_dssp SSSCHHHHHHHHHSCTTEECSSCEEET--TEE-----------EEEEEEEEECC---------------EECCHHHHHHH
T ss_pred ccccHHHHHHHHcCCCCCccCceEEEC--CEE-----------EEEEEEEecCC---------------CCCCHHHHHHH
Confidence 358899999999999998542 3332 122 33455555421 12367888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC
Q 009190 380 LLQKCREVEQTAKDQATDNAILDQLYKMVEIDI 412 (540)
Q Consensus 380 Ire~l~~~~~~~~~~~~~~~il~~L~e~~~~~l 412 (540)
|+..|..+.... ..++.++.|.++..+++
T Consensus 223 I~~~L~~~k~~~----~~~~~~~~Lr~~a~I~i 251 (252)
T 3rfw_A 223 IENGLKFEEFKK----VINQKGQDLLNSAKVEY 251 (252)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHhhCeeee
Confidence 988887765543 44667788888777765
No 66
>1zxj_A MPN555, hypothetical protein Mg377 homolog; mostly alpha helical protein, TRI-lobal structure, structural genomics, PSI; 2.80A {Mycoplasma pneumoniae}
Probab=33.35 E-value=2.7e+02 Score=26.04 Aligned_cols=70 Identities=11% Similarity=0.226 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCcCCChhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009190 397 DNAILDQLYKMVEIDIPQSLFEEQGRQLYGAQLLQMQAGMKLNEQQLAALSSPKAVKEFLENQRENITNVIKQNLAVGDI 476 (540)
Q Consensus 397 ~~~il~~L~e~~~~~lPe~lv~~e~~~~~~~~~~~l~~~~~~~~e~~~~~~~~~~~ee~~e~~~~~a~~~vK~~Lil~~I 476 (540)
..=|+++|++..++.+.+.-|++.+..+. .++|.+.+.+ +.+.. .....+..|...-+++.|
T Consensus 141 lgLvL~eIak~e~IeVtdEEV~~~I~e~A--------~~Y~~~~e~~--~~n~~--------~l~~lr~~IleeKvvd~I 202 (218)
T 1zxj_A 141 KALVFNHLQKEWKVEITDEVVKNVISLYY--------EKTNQSVREY--LDDKQ--------KFEGVRTALLEERMVLET 202 (218)
T ss_dssp HHHHHHHHHHHHTCCCCHHHHHHHHHHHH--------HHSCSCCHHH--HSCHH--------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHH--------HHcCCCHHHH--HhCHH--------HHHHHHHHHHHHHHHHHH
Confidence 34569999999999999999988766443 3456555442 22221 223455566677777777
Q ss_pred HHhcCCCC
Q 009190 477 FKRENLQF 484 (540)
Q Consensus 477 a~~enI~V 484 (540)
.+.-+++.
T Consensus 203 le~AkVt~ 210 (218)
T 1zxj_A 203 INHFKFHF 210 (218)
T ss_dssp HHTCCEEE
T ss_pred HHhCeEEE
Confidence 77665543
No 67
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=25.52 E-value=68 Score=32.90 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-hhh------hccHHHHHHHH
Q 009190 451 AVKEFLENQRENITNVIK-------QNLAVGDIFKRENLQFSTEDLVKEVENSIAELKQ-QKQ------EYDEDRVREQV 516 (540)
Q Consensus 451 ~~ee~~e~~~~~a~~~vK-------~~Lil~~Ia~~enI~VseeEi~~ei~~~~~~~~~-~~~------~~~~~~~~~~i 516 (540)
++++|++.++++.++..+ ..-+++++++...+.+.+.=|++++..+..++.+ +.+ .+..+.++++.
T Consensus 265 tleelk~~ir~~l~~~~~~~~~~~~~~~v~~~l~e~~~~~lP~~lv~~e~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~A 344 (392)
T 1t11_A 265 GVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVLRQQAAQRFGGNVEAAAQLPRELFEEQA 344 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTBCSCCCEEECHHHHHHHHHHHHHHHHHHSSCSHHHHTTSCGGGTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Confidence 455555555554444333 3334677888889999999999999988776542 111 11123345666
Q ss_pred HHHHHHHHHHHHHHHhCeee
Q 009190 517 IDILEGAKVLEWLREHAEIQ 536 (540)
Q Consensus 517 ~~~l~~~Kvld~L~e~aki~ 536 (540)
...+...-+++-|.+..+|+
T Consensus 345 e~~vk~~Lil~~ia~~e~i~ 364 (392)
T 1t11_A 345 KRRVVVGLLLGEVIRTHELK 364 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 66677777777777766554
No 68
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.84 E-value=1.3e+02 Score=21.10 Aligned_cols=29 Identities=21% Similarity=0.446 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009190 372 TIEQVKETLLQKCREVEQTAKDQATDNAILDQLY 405 (540)
Q Consensus 372 tleelk~~Ire~l~~~~~~~~~~~~~~~il~~L~ 405 (540)
.++.||+.|-+++.++.+. +++.|+++|.
T Consensus 8 dle~~KqEIL~E~RkElqK-----~K~EIIeAi~ 36 (45)
T 1use_A 8 DLQRVKQELLEEVKKELQK-----VKEEIIEAFV 36 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 4677888877777666543 4555555554
No 69
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=23.99 E-value=53 Score=26.86 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCC
Q 009190 114 KDSYKRVLNELMKQVKIPGFRPGK 137 (540)
Q Consensus 114 ~~~~~k~l~~~~k~~~IpGFRkGK 137 (540)
-+.+=+.+++.+..-+.|||+.|-
T Consensus 64 PEgIv~~IKeWRa~nG~pgFK~~~ 87 (94)
T 3u43_A 64 PEGIVKEIKEWRAANGKSGFKQGL 87 (94)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCCS
T ss_pred HHHHHHHHHHHHHHcCCccchhhH
Confidence 345667789999999999999993
No 70
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=23.93 E-value=3.1e+02 Score=23.97 Aligned_cols=52 Identities=15% Similarity=0.247 Sum_probs=34.1
Q ss_pred eEEEEecCCCCcccccCCCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 009190 320 TKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV 387 (540)
Q Consensus 320 ~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire~l~~~ 387 (540)
..++++.+-.||. .++=|+++.+.+ +.-|+ ||. .+.|+++|++.|..++..-
T Consensus 74 ~~~vEvhil~df~-~dlYG~~i~v~f-~~~lR----~E~----------kF~sle~L~~qI~~D~~~a 125 (147)
T 1nb0_A 74 KKSMETHIMHTFK-EDFYGEILNVAI-VGYLR----PEK----------NFDSLESLISAIQGDIEEA 125 (147)
T ss_dssp CEEEEEEESSCCS-SCCTTSEEEEEE-EEEEE----CCC----------CCSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCCC-CccCCCEEEEEE-ehhcc----CCc----------CCCCHHHHHHHHHHHHHHH
Confidence 5567776554554 367788765544 23332 332 6889999999999887653
No 71
>2l7y_A Putative endo-beta-N-acetylglucosaminidase; putative surface protein, structural protein; NMR {Streptococcus pneumoniae}
Probab=23.78 E-value=1.2e+02 Score=24.98 Aligned_cols=35 Identities=17% Similarity=0.379 Sum_probs=24.4
Q ss_pred CCCCcchHHhhcCCCCCceEEEEecCCCCcccccCCCceeEEEEEEEEe
Q 009190 302 DKVLPGFLDSISGIQRGETKSFRLAFPESWRQEHLRGVQAQFTVECREL 350 (540)
Q Consensus 302 ~~~ip~fe~~LiG~k~Ge~~~~~v~fPedy~~~~laGk~v~F~VtVk~I 350 (540)
+-.+-||+..=.| + .++++++ .|+++.|+|+|+..
T Consensus 50 ~v~VsGfDs~~~G----~-QtlTVtY---------~G~t~~f~V~V~~~ 84 (98)
T 2l7y_A 50 GVEISGYDAQKTG----R-QTLTLHY---------QGHEVSFDVLVSPK 84 (98)
T ss_dssp TSEEESCCTTSCS----S-EEEEEEE---------TTEEEEEEEEEECC
T ss_pred CcEEEccCCCCCC----c-EEEEEEE---------CCEEEEEEEEEEec
Confidence 3466777665444 3 3577763 68999999999875
No 72
>1unk_A Colicin E7; immunity protein, dimeric structure, RNAse active site; 1.80A {Escherichia coli} SCOP: a.28.2.1 PDB: 1mz8_A 1ayi_A 2jaz_A 2jb0_A 2jbg_A 7cei_A 1znv_A 1cei_A 1ujz_A 2erh_A
Probab=22.22 E-value=68 Score=25.82 Aligned_cols=22 Identities=23% Similarity=0.465 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhCCCCCCCCC
Q 009190 115 DSYKRVLNELMKQVKIPGFRPG 136 (540)
Q Consensus 115 ~~~~k~l~~~~k~~~IpGFRkG 136 (540)
+.+=+.+++.+..-+.|||+.|
T Consensus 66 EgIv~~iKeWRa~nG~pgFK~~ 87 (87)
T 1unk_A 66 EGIVKEIKEWRAANGKPGFKQG 87 (87)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHHHHHHcCCcccCCC
Confidence 4566778999999999999988
No 73
>1gxg_A Colicin E8 immunity protein; inhibitor, inhibitor protein of DNAse colicin E8, bacteriocin immunity, plasmid,; NMR {Escherichia coli} SCOP: a.28.2.1 PDB: 1gxh_A
Probab=21.75 E-value=67 Score=25.71 Aligned_cols=23 Identities=17% Similarity=0.330 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCC
Q 009190 114 KDSYKRVLNELMKQVKIPGFRPG 136 (540)
Q Consensus 114 ~~~~~k~l~~~~k~~~IpGFRkG 136 (540)
-+.+=+.+++++..-+.|||+.|
T Consensus 63 pE~Iv~~ik~wRa~~g~p~Fk~~ 85 (85)
T 1gxg_A 63 PEAVIKEIKEWRAANGKSGFKQG 85 (85)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSCC
T ss_pred HHHHHHHHHHHHHHcCCcccCCC
Confidence 34566777899999999999988
No 74
>1fr2_A Colicin E9 immunity protein; protein-protein complex, zinc containing enzyme, HNH-motif, immune system; 1.60A {Escherichia coli} SCOP: a.28.2.1 PDB: 1e0h_A 1emv_A 1imp_A 1imq_A 2k5x_A 2vln_A 2vlp_A 2vlq_A 2vlo_A 2gzf_A 2gzg_A 2gzi_A 2gyk_A 2gzj_A 2gze_A 1bxi_A 3gkl_C 3gjn_A
Probab=21.63 E-value=60 Score=26.06 Aligned_cols=23 Identities=13% Similarity=0.251 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCC
Q 009190 114 KDSYKRVLNELMKQVKIPGFRPG 136 (540)
Q Consensus 114 ~~~~~k~l~~~~k~~~IpGFRkG 136 (540)
-+.+=+.+++++..-+.|||+.|
T Consensus 64 pE~Iv~~ik~wRa~~G~pgFK~~ 86 (86)
T 1fr2_A 64 PSGIVNTVKQWRAANGKSGFKQG 86 (86)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBC-
T ss_pred HHHHHHHHHHHHHHcCCcccCCC
Confidence 34566778999999999999987
No 75
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=20.87 E-value=3.8e+02 Score=23.87 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=34.1
Q ss_pred eEEEEecCCCCcccccCCCceeEEEEEEEEeeecCCCCCChHHHhhhCCCCCCHHHHHHHHHHHHHHH
Q 009190 320 TKSFRLAFPESWRQEHLRGVQAQFTVECRELFYRDLPKLDDSLAGKLLPGCTTIEQVKETLLQKCREV 387 (540)
Q Consensus 320 ~~~~~v~fPedy~~~~laGk~v~F~VtVk~Ik~~~lPELdDEfak~l~~~~~tleelk~~Ire~l~~~ 387 (540)
..++++.+-.||. .++=|+.+.+.+ +.-|+ ||. .+.|+++|++.|..+++.-
T Consensus 92 ~~~vEvhil~df~-~dlYG~~i~V~f-~~~lR----~E~----------kF~sle~L~~qI~~D~~~a 143 (163)
T 1n08_A 92 LRSAEVHLIERQG-EDFYEEIMRVIV-LGYIR----PEL----------NYAGLDKLIEDIHTDIRVA 143 (163)
T ss_dssp CEEEEEEETTCCS-CCCTTCEEEEEE-EEEEE----CCC----------CCCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCCC-CccCCCEEEEEE-HHhcc----CCC----------CCCCHHHHHHHHHHHHHHH
Confidence 4567776554554 467788765544 23332 332 6889999999999887653
Done!