Query 009194
Match_columns 540
No_of_seqs 220 out of 2644
Neff 10.3
Searched_HMMs 46136
Date Thu Mar 28 21:34:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009194.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009194hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.1E-28 2.5E-33 276.3 27.0 194 36-241 68-269 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.5E-28 3.2E-33 275.5 27.3 454 36-529 92-583 (968)
3 PLN03210 Resistant to P. syrin 100.0 3.6E-27 7.8E-32 264.4 25.8 397 1-484 490-909 (1153)
4 PLN03210 Resistant to P. syrin 99.9 2.4E-23 5.1E-28 233.8 22.3 365 59-516 532-909 (1153)
5 KOG4658 Apoptotic ATPase [Sign 99.9 3.7E-22 8.1E-27 213.0 13.5 371 1-485 483-864 (889)
6 KOG4194 Membrane glycoprotein 99.9 1.2E-22 2.5E-27 196.0 7.3 371 33-479 48-427 (873)
7 KOG4194 Membrane glycoprotein 99.9 6.8E-23 1.5E-27 197.6 3.8 353 34-418 75-439 (873)
8 KOG0444 Cytoskeletal regulator 99.8 4.4E-22 9.5E-27 193.5 -2.6 340 36-410 31-378 (1255)
9 KOG0444 Cytoskeletal regulator 99.8 2.1E-21 4.5E-26 188.8 -3.3 366 35-483 5-377 (1255)
10 KOG0618 Serine/threonine phosp 99.8 4.9E-21 1.1E-25 194.5 -1.6 162 307-512 306-488 (1081)
11 KOG0472 Leucine-rich repeat pr 99.7 3.4E-21 7.3E-26 178.2 -10.1 260 38-322 46-308 (565)
12 KOG0472 Leucine-rich repeat pr 99.7 3E-21 6.6E-26 178.5 -10.6 410 37-479 68-539 (565)
13 KOG0618 Serine/threonine phosp 99.7 3.6E-19 7.8E-24 181.0 -4.5 87 38-127 46-134 (1081)
14 KOG0617 Ras suppressor protein 99.6 3.1E-18 6.8E-23 140.5 -5.3 170 48-231 22-194 (264)
15 KOG0617 Ras suppressor protein 99.6 4.5E-17 9.7E-22 133.8 -4.6 153 34-191 30-186 (264)
16 PRK15387 E3 ubiquitin-protein 99.4 2.6E-12 5.7E-17 135.2 15.3 171 36-241 200-371 (788)
17 PRK15387 E3 ubiquitin-protein 99.4 3.1E-12 6.7E-17 134.6 15.8 251 18-322 205-456 (788)
18 KOG4658 Apoptotic ATPase [Sign 99.4 2.9E-13 6.3E-18 145.3 7.2 73 335-411 712-787 (889)
19 PRK15370 E3 ubiquitin-protein 99.4 3.9E-12 8.4E-17 134.7 13.0 250 34-322 175-426 (754)
20 PRK15370 E3 ubiquitin-protein 99.4 6.5E-12 1.4E-16 133.0 13.4 234 26-295 189-426 (754)
21 KOG4341 F-box protein containi 99.3 4.5E-14 9.8E-19 132.2 -4.5 170 308-508 291-460 (483)
22 KOG4341 F-box protein containi 99.3 4.5E-14 9.8E-19 132.3 -4.9 267 253-531 160-440 (483)
23 KOG4237 Extracellular matrix p 99.2 1.5E-12 3.3E-17 121.2 -0.6 241 21-266 52-331 (498)
24 KOG4237 Extracellular matrix p 99.2 8.8E-13 1.9E-17 122.8 -4.9 103 87-190 69-176 (498)
25 cd00116 LRR_RI Leucine-rich re 99.1 1.5E-11 3.3E-16 120.3 2.7 160 57-222 21-205 (319)
26 KOG0532 Leucine-rich repeat (L 99.1 3.2E-12 7E-17 124.4 -3.1 192 24-231 59-255 (722)
27 PF14580 LRR_9: Leucine-rich r 99.1 9.5E-11 2.1E-15 101.2 4.6 102 38-143 20-126 (175)
28 PF14580 LRR_9: Leucine-rich r 99.0 1.9E-10 4.1E-15 99.3 4.7 126 85-217 19-147 (175)
29 KOG0532 Leucine-rich repeat (L 99.0 4.6E-11 9.9E-16 116.5 -1.8 189 41-245 54-247 (722)
30 cd00116 LRR_RI Leucine-rich re 99.0 7.3E-10 1.6E-14 108.4 6.3 205 36-247 50-293 (319)
31 KOG3207 Beta-tubulin folding c 98.9 2.8E-10 6E-15 107.8 1.0 187 34-222 118-313 (505)
32 KOG1259 Nischarin, modulator o 98.9 4.2E-10 9E-15 101.4 0.1 185 34-228 211-417 (490)
33 KOG1259 Nischarin, modulator o 98.8 6.9E-10 1.5E-14 100.0 -1.1 125 36-164 283-410 (490)
34 KOG3207 Beta-tubulin folding c 98.8 1.9E-09 4E-14 102.3 1.4 177 82-266 118-310 (505)
35 COG4886 Leucine-rich repeat (L 98.8 9.4E-09 2E-13 103.6 6.1 186 42-242 98-287 (394)
36 KOG2120 SCF ubiquitin ligase, 98.7 4.6E-10 9.9E-15 101.1 -3.9 180 312-529 186-375 (419)
37 COG4886 Leucine-rich repeat (L 98.7 1.3E-08 2.7E-13 102.7 5.6 187 63-266 97-286 (394)
38 KOG1909 Ran GTPase-activating 98.5 4.8E-08 1E-12 90.4 1.2 161 57-221 90-281 (382)
39 KOG2120 SCF ubiquitin ligase, 98.4 7.9E-09 1.7E-13 93.3 -4.1 66 307-379 309-374 (419)
40 KOG1859 Leucine-rich repeat pr 98.4 3.3E-09 7.1E-14 106.6 -8.3 130 86-226 165-295 (1096)
41 PF13855 LRR_8: Leucine rich r 98.3 4.1E-07 9E-12 64.3 3.4 55 86-140 2-59 (61)
42 KOG3665 ZYG-1-like serine/thre 98.3 3E-07 6.5E-12 97.0 3.4 103 60-162 123-229 (699)
43 PLN03150 hypothetical protein; 98.3 1.8E-06 3.9E-11 91.5 8.8 104 109-221 419-526 (623)
44 PF13855 LRR_8: Leucine rich r 98.3 7E-07 1.5E-11 63.1 3.9 55 109-163 2-59 (61)
45 KOG1947 Leucine rich repeat pr 98.3 8E-08 1.7E-12 99.8 -1.9 123 283-409 187-310 (482)
46 KOG3665 ZYG-1-like serine/thre 98.2 6.5E-07 1.4E-11 94.5 3.5 136 84-222 121-262 (699)
47 PLN03150 hypothetical protein; 98.2 3.9E-06 8.5E-11 88.9 9.3 104 86-190 419-527 (623)
48 KOG1909 Ran GTPase-activating 98.1 4.5E-06 9.7E-11 77.6 4.8 227 35-266 28-307 (382)
49 PRK15386 type III secretion pr 98.1 1.4E-05 3.1E-10 77.9 8.3 153 309-527 50-210 (426)
50 KOG2982 Uncharacterized conser 98.0 1.7E-06 3.7E-11 78.5 1.8 198 61-266 47-258 (418)
51 PRK15386 type III secretion pr 98.0 4.2E-05 9E-10 74.7 10.0 134 283-478 51-187 (426)
52 KOG0531 Protein phosphatase 1, 97.9 1.1E-06 2.3E-11 89.0 -1.7 129 57-191 70-199 (414)
53 KOG0531 Protein phosphatase 1, 97.9 1.6E-06 3.4E-11 87.7 -0.6 187 36-239 71-262 (414)
54 PF12799 LRR_4: Leucine Rich r 97.9 1.1E-05 2.5E-10 52.1 3.4 38 109-146 2-40 (44)
55 PF12799 LRR_4: Leucine Rich r 97.9 3E-05 6.4E-10 50.2 4.5 34 131-164 2-35 (44)
56 KOG1947 Leucine rich repeat pr 97.8 2E-06 4.4E-11 89.3 -1.8 146 309-479 186-332 (482)
57 KOG4579 Leucine-rich repeat (L 97.8 3.1E-06 6.7E-11 67.9 -1.6 90 82-172 50-141 (177)
58 KOG1644 U2-associated snRNP A' 97.7 7.6E-05 1.6E-09 64.3 6.0 121 39-163 21-150 (233)
59 KOG1859 Leucine-rich repeat pr 97.7 1.2E-06 2.7E-11 88.6 -5.7 110 79-191 181-292 (1096)
60 KOG2982 Uncharacterized conser 97.7 1.5E-05 3.2E-10 72.6 1.2 69 338-410 197-265 (418)
61 KOG1644 U2-associated snRNP A' 97.6 0.00012 2.7E-09 63.0 5.6 103 37-141 42-151 (233)
62 KOG4579 Leucine-rich repeat (L 97.5 5.6E-06 1.2E-10 66.5 -2.9 111 36-148 26-141 (177)
63 KOG2123 Uncharacterized conser 97.3 1.6E-05 3.4E-10 71.7 -4.0 78 86-164 20-99 (388)
64 KOG3864 Uncharacterized conser 96.9 0.00023 4.9E-09 61.5 -0.4 73 335-410 120-192 (221)
65 KOG2123 Uncharacterized conser 96.8 8E-05 1.7E-09 67.3 -4.0 78 58-140 18-98 (388)
66 KOG2739 Leucine-rich acidic nu 96.7 0.00098 2.1E-08 60.1 2.6 108 107-221 42-154 (260)
67 KOG3864 Uncharacterized conser 96.5 0.00037 8.1E-09 60.2 -1.4 72 438-516 121-192 (221)
68 KOG2739 Leucine-rich acidic nu 96.4 0.0021 4.6E-08 58.1 2.7 104 57-164 41-154 (260)
69 COG5238 RNA1 Ran GTPase-activa 95.9 0.0038 8.3E-08 56.6 1.8 85 36-120 29-132 (388)
70 COG5238 RNA1 Ran GTPase-activa 95.8 0.017 3.8E-07 52.5 5.5 164 54-221 87-283 (388)
71 PF13306 LRR_5: Leucine rich r 95.7 0.026 5.6E-07 46.5 6.0 98 57-161 10-111 (129)
72 PF13306 LRR_5: Leucine rich r 95.4 0.042 9E-07 45.3 6.1 105 77-187 4-112 (129)
73 PF00560 LRR_1: Leucine Rich R 95.2 0.0089 1.9E-07 32.0 0.9 19 132-150 2-20 (22)
74 PF00560 LRR_1: Leucine Rich R 93.2 0.022 4.8E-07 30.4 -0.2 16 87-102 2-17 (22)
75 PF13504 LRR_7: Leucine rich r 93.0 0.076 1.6E-06 26.3 1.6 16 131-146 2-17 (17)
76 smart00367 LRR_CC Leucine-rich 89.6 0.18 3.9E-06 28.1 1.0 17 442-458 2-18 (26)
77 smart00367 LRR_CC Leucine-rich 89.6 0.15 3.2E-06 28.5 0.7 18 467-484 1-18 (26)
78 smart00369 LRR_TYP Leucine-ric 86.8 0.58 1.2E-05 26.0 2.0 19 130-148 2-20 (26)
79 smart00370 LRR Leucine-rich re 86.8 0.58 1.2E-05 26.0 2.0 19 130-148 2-20 (26)
80 KOG0473 Leucine-rich repeat pr 80.0 0.048 1E-06 48.5 -6.5 84 57-143 40-124 (326)
81 KOG0473 Leucine-rich repeat pr 77.2 0.079 1.7E-06 47.2 -6.0 84 82-165 39-123 (326)
82 PF13516 LRR_6: Leucine Rich r 66.7 1.2 2.7E-05 24.1 -0.7 14 108-121 2-15 (24)
83 smart00364 LRR_BAC Leucine-ric 64.9 4.3 9.3E-05 22.6 1.2 17 131-147 3-19 (26)
84 smart00365 LRR_SD22 Leucine-ri 57.2 9.4 0.0002 21.3 1.7 14 130-143 2-15 (26)
85 KOG4308 LRR-containing protein 55.3 0.46 9.9E-06 48.7 -6.7 159 61-223 89-275 (478)
86 smart00368 LRR_RI Leucine rich 40.1 21 0.00046 20.1 1.5 13 109-121 3-15 (28)
87 KOG4308 LRR-containing protein 27.1 3.4 7.3E-05 42.4 -5.7 180 39-225 89-305 (478)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=1.1e-28 Score=276.31 Aligned_cols=194 Identities=21% Similarity=0.316 Sum_probs=128.0
Q ss_pred cCCCeEEEccCCCCCC-CCC-cCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCC-CCcccccCCCCcE
Q 009194 36 QKDPIAISLPHRDIQE-LPE-RLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSS-LPSSLGRLINLQT 112 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~-l~~-~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~~~l~~l~~L~~ 112 (540)
..+++.++++++.+.. ++. +..+++|+.|++++|.+ ...+|.+++.++++|++|++++|.+.. +|. +.+++|++
T Consensus 68 ~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~-~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~ 144 (968)
T PLN00113 68 SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL-SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLET 144 (968)
T ss_pred CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCcc-CCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCE
Confidence 3478889998887743 333 33788999999998887 667888877788888888888887753 443 45677777
Q ss_pred EEcCCCccCC--cccccCCCCCCEEEecCCCCc-ccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCC
Q 009194 113 LCLDWCELAD--IAAIGQLKKLEILSLAYSNIN-QLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGF 189 (540)
Q Consensus 113 L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~-~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 189 (540)
|++++|.+.. |..++++++|++|++++|.+. .+|..++++++|++|++++|.....+|.. ++++++|+.|++++|.
T Consensus 145 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n~ 223 (968)
T PLN00113 145 LDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRE-LGQMKSLKWIYLGYNN 223 (968)
T ss_pred EECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChH-HcCcCCccEEECcCCc
Confidence 7777777653 566777777777777777654 56666777777777777777644555554 6777777777777665
Q ss_pred cccccccCCCccchhhccCCCCccEEEeecCCCC-CCCccccc-cCccEEEEEe
Q 009194 190 SGWEKVEGGSNASLVELERLTELTTLEIEVPDAE-ILPPDFVS-VELQRYKIRI 241 (540)
Q Consensus 190 ~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~-~~~~~~~~-~~L~~L~l~~ 241 (540)
+.. ..+..++++++|++|++++|... .+|..+.. ++|+.|.+..
T Consensus 224 l~~--------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~ 269 (968)
T PLN00113 224 LSG--------EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269 (968)
T ss_pred cCC--------cCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcC
Confidence 541 22334555566666666655532 33433333 5555555543
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.5e-28 Score=275.48 Aligned_cols=454 Identities=15% Similarity=0.109 Sum_probs=259.3
Q ss_pred cCCCeEEEccCCCCC-CCCCcC--CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCC-CCCcccccCCCCc
Q 009194 36 QKDPIAISLPHRDIQ-ELPERL--QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSS-SLPSSLGRLINLQ 111 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~-~l~~~~--~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~~~l~~l~~L~ 111 (540)
.+.++.|++++|.+. .+|... .+++||+|++++|.+ ...++. ..+++|++|++++|.+. .+|..++++++|+
T Consensus 92 l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l-~~~~p~---~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 167 (968)
T PLN00113 92 LPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNF-TGSIPR---GSIPNLETLDLSNNMLSGEIPNDIGSFSSLK 167 (968)
T ss_pred CCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCcc-ccccCc---cccCCCCEEECcCCcccccCChHHhcCCCCC
Confidence 578889999988874 566532 788888888888876 444553 45788888888888775 5677788888888
Q ss_pred EEEcCCCccCC--cccccCCCCCCEEEecCCCCc-ccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCC
Q 009194 112 TLCLDWCELAD--IAAIGQLKKLEILSLAYSNIN-QLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNG 188 (540)
Q Consensus 112 ~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~-~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 188 (540)
+|++++|.+.. |..++++++|++|++++|.+. .+|..++++++|++|++++|.....+|.. ++++++|++|++++|
T Consensus 168 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~L~~n 246 (968)
T PLN00113 168 VLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYE-IGGLTSLNHLDLVYN 246 (968)
T ss_pred EEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChh-HhcCCCCCEEECcCc
Confidence 88888887654 677888888888888888665 57777888888888888887755566665 788888888888877
Q ss_pred CcccccccCCCccchhhccCCCCccEEEeecCCCC-CCCccccc-cCccEEEEEecCCCCCCCCccccccccccEEEEec
Q 009194 189 FSGWEKVEGGSNASLVELERLTELTTLEIEVPDAE-ILPPDFVS-VELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKG 266 (540)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~-~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~ 266 (540)
.+.. ..+..++++++|+.|++++|.+. .+|..+.. ++|+.|.++.+...... ......+++|+.|++.+
T Consensus 247 ~l~~--------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~l~~ 317 (968)
T PLN00113 247 NLTG--------PIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEI-PELVIQLQNLEILHLFS 317 (968)
T ss_pred eecc--------ccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCC-ChhHcCCCCCcEEECCC
Confidence 6541 23445667777777777777643 44444444 66777776544322110 01134556677777665
Q ss_pred cccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeeccccCcee-eecc---------------
Q 009194 267 IKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILH-IVGS--------------- 330 (540)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~-~~~~--------------- 330 (540)
+.-...+ + .....+++|+.|.+.++......... ++.+++|+.|+++++. ++. ++..
T Consensus 318 n~~~~~~--~-~~~~~l~~L~~L~L~~n~l~~~~p~~---l~~~~~L~~L~Ls~n~-l~~~~p~~~~~~~~L~~L~l~~n 390 (968)
T PLN00113 318 NNFTGKI--P-VALTSLPRLQVLQLWSNKFSGEIPKN---LGKHNNLTVLDLSTNN-LTGEIPEGLCSSGNLFKLILFSN 390 (968)
T ss_pred CccCCcC--C-hhHhcCCCCCEEECcCCCCcCcCChH---HhCCCCCcEEECCCCe-eEeeCChhHhCcCCCCEEECcCC
Confidence 3211111 1 11123466666666554432222111 3345566666665552 211 1100
Q ss_pred ----ccccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccc
Q 009194 331 ----VRRVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDD 406 (540)
Q Consensus 331 ----~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~ 406 (540)
........+++|+.|++.++.--...+.. ...++.|+.|+++++. ++...+. ....+++|+.|++++|..
T Consensus 391 ~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~----~~~l~~L~~L~Ls~N~-l~~~~~~-~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 391 SLEGEIPKSLGACRSLRRVRLQDNSFSGELPSE----FTKLPLVYFLDISNNN-LQGRINS-RKWDMPSLQMLSLARNKF 464 (968)
T ss_pred EecccCCHHHhCCCCCCEEECcCCEeeeECChh----HhcCCCCCEEECcCCc-ccCccCh-hhccCCCCcEEECcCcee
Confidence 00002234455555555554322222211 3445666666666542 3333221 234556666666666554
Q ss_pred cccccccCCCCCCCccceeeecccCCC--CCCCccCCCCccEEEEccCCCcccccchhhhhhcCCCcEEEEeccccccee
Q 009194 407 LKMIIGPDMEKPPTTQGFIEINAEDDP--VHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGV 484 (540)
Q Consensus 407 l~~~~~~~~~~~~~l~~l~~i~~~~~~--~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~~L~~~ 484 (540)
...++.. ...+.|..+ +++.+... .+.....+++|+.|++++|.-...+| ..+.++++|++|++++|.-...+
T Consensus 465 ~~~~p~~--~~~~~L~~L-~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~ 539 (968)
T PLN00113 465 FGGLPDS--FGSKRLENL-DLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIP--DELSSCKKLVSLDLSHNQLSGQI 539 (968)
T ss_pred eeecCcc--cccccceEE-ECcCCccCCccChhhhhhhccCEEECcCCcceeeCC--hHHcCccCCCEEECCCCcccccC
Confidence 4333211 111333333 33333211 22234456677777777764433432 23456677777777776432222
Q ss_pred ccccccCCCCccccccccceeecccCCCC-------CCCCCCCceEeecCCC
Q 009194 485 VNTTTLGGRDEFKVFPKLHYLSLHWLPKL-------SSFASPEDVIHTEMQP 529 (540)
Q Consensus 485 ~~~~~~~~~~~~~~~~~L~~L~l~~~p~L-------~~~~~l~~l~i~~c~~ 529 (540)
+ +. +..+++|++|+++++.-. ..+.+|+.+++++|+-
T Consensus 540 p--~~------~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l 583 (968)
T PLN00113 540 P--AS------FSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583 (968)
T ss_pred C--hh------HhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcc
Confidence 1 11 235677777777766553 2345577777777653
No 3
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.95 E-value=3.6e-27 Score=264.43 Aligned_cols=397 Identities=19% Similarity=0.231 Sum_probs=219.2
Q ss_pred CcchhhhHHHhhhcCCC-------EeEecCcchhhhhhhhhhcCCCeEEEccCCCCCCC--CC--cCCCCCccEEEcccC
Q 009194 1 MHDVIHVVAVSIATEER-------MFNVPNVADLEKKMEETIQKDPIAISLPHRDIQEL--PE--RLQCPNLQLFLLYTE 69 (540)
Q Consensus 1 mHdli~d~a~~~~~e~~-------~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~l--~~--~~~~~~L~~L~l~~~ 69 (540)
||||+||||+++++++. |+ +...+..+.+...+..++++.+++....++.+ .. +.++++|+.|.+..+
T Consensus 490 MHdLl~~~~r~i~~~~~~~~~~r~~l-~~~~di~~vl~~~~g~~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~ 568 (1153)
T PLN03210 490 MHSLLQEMGKEIVRAQSNEPGEREFL-VDAKDICDVLEDNTGTKKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTK 568 (1153)
T ss_pred hhhHHHHHHHHHHHhhcCCCCcceeE-eCHHHHHHHHHhCcccceeeEEEeccCccceeeecHHHHhcCccccEEEEecc
Confidence 99999999999987552 22 33222222233334566778887765555332 11 337778888777554
Q ss_pred CC-----CCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCC-CC
Q 009194 70 GN-----GPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYS-NI 142 (540)
Q Consensus 70 ~~-----~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~-~~ 142 (540)
.. ....++.++..-...||.|.+.++.+..+|..+ ...+|++|++.++.+.. +..+..+++|++|+++++ .+
T Consensus 569 ~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l 647 (1153)
T PLN03210 569 KWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNL 647 (1153)
T ss_pred cccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCc
Confidence 21 012344443222346888888887777777766 46778888888877776 566777888888888776 45
Q ss_pred cccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCC-
Q 009194 143 NQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPD- 221 (540)
Q Consensus 143 ~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~- 221 (540)
..+|. ++.+++|++|++++|.....+|.. ++++++|+.|++++|.... ..+ .-.++++|+.|++++|.
T Consensus 648 ~~ip~-ls~l~~Le~L~L~~c~~L~~lp~s-i~~L~~L~~L~L~~c~~L~--------~Lp-~~i~l~sL~~L~Lsgc~~ 716 (1153)
T PLN03210 648 KEIPD-LSMATNLETLKLSDCSSLVELPSS-IQYLNKLEDLDMSRCENLE--------ILP-TGINLKSLYRLNLSGCSR 716 (1153)
T ss_pred CcCCc-cccCCcccEEEecCCCCccccchh-hhccCCCCEEeCCCCCCcC--------ccC-CcCCCCCCCEEeCCCCCC
Confidence 66663 677778888888877767777766 6777888888877764331 111 11256677777777765
Q ss_pred CCCCCccccccCccEEEEEecCCCCCCCCccccccccccEEEEeccccccccccchhhhhhhcccceeeeccccCccccc
Q 009194 222 AEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVV 301 (540)
Q Consensus 222 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 301 (540)
...+|.. ..+|+.|.+....+...+ ....+++|+.|.+.. +....-+.
T Consensus 717 L~~~p~~--~~nL~~L~L~~n~i~~lP---~~~~l~~L~~L~l~~---------------------------~~~~~l~~ 764 (1153)
T PLN03210 717 LKSFPDI--STNISWLDLDETAIEEFP---SNLRLENLDELILCE---------------------------MKSEKLWE 764 (1153)
T ss_pred ccccccc--cCCcCeeecCCCcccccc---ccccccccccccccc---------------------------cchhhccc
Confidence 2233221 134444444332221110 011223333333322 11100000
Q ss_pred --ccCc--cCCCCccccEEeeccccCceeeeccccccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEee
Q 009194 302 --HELD--DGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDS 377 (540)
Q Consensus 302 --~~~~--~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~ 377 (540)
..+. ....+++|+.|.+++|+.+..++. ..+.+++|+.|++.+|..++.++.. ..+++|+.|++++
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~-----si~~L~~L~~L~Ls~C~~L~~LP~~-----~~L~sL~~L~Ls~ 834 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPS-----SIQNLHKLEHLEIENCINLETLPTG-----INLESLESLDLSG 834 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccCh-----hhhCCCCCCEEECCCCCCcCeeCCC-----CCccccCEEECCC
Confidence 0000 011234555555555544443322 2344555555555555555544432 1345555555555
Q ss_pred CCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCccCCCCccEEEEccCCCccc
Q 009194 378 CRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLTKVTVWSCHRLKY 457 (540)
Q Consensus 378 c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~ 457 (540)
|..+..+|. ..++|+.|++++ ..++.+ +..+..+++|+.|++.+|++++.
T Consensus 835 c~~L~~~p~-----~~~nL~~L~Ls~-n~i~~i------------------------P~si~~l~~L~~L~L~~C~~L~~ 884 (1153)
T PLN03210 835 CSRLRTFPD-----ISTNISDLNLSR-TGIEEV------------------------PWWIEKFSNLSFLDMNGCNNLQR 884 (1153)
T ss_pred CCccccccc-----cccccCEeECCC-CCCccC------------------------hHHHhcCCCCCEEECCCCCCcCc
Confidence 555544432 123455555544 233322 22344567788888888888877
Q ss_pred ccchhhhhhcCCCcEEEEeccccccee
Q 009194 458 LFSYSMVNSLGQLQHLEIRNCRSIEGV 484 (540)
Q Consensus 458 l~~~~~~~~l~~L~~L~i~~C~~L~~~ 484 (540)
++.. ...+++|+.+++++|++|+.+
T Consensus 885 l~~~--~~~L~~L~~L~l~~C~~L~~~ 909 (1153)
T PLN03210 885 VSLN--ISKLKHLETVDFSDCGALTEA 909 (1153)
T ss_pred cCcc--cccccCCCeeecCCCcccccc
Confidence 7542 456777888888888777665
No 4
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=2.4e-23 Score=233.79 Aligned_cols=365 Identities=18% Similarity=0.229 Sum_probs=261.6
Q ss_pred CCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCC-------CCCcccccCC-CCcEEEcCCCccCC-cccccCC
Q 009194 59 PNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSS-------SLPSSLGRLI-NLQTLCLDWCELAD-IAAIGQL 129 (540)
Q Consensus 59 ~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~-------~l~~~l~~l~-~L~~L~l~~~~~~~-~~~i~~l 129 (540)
.+.+.+.+.........+....|.++++|+.|.++.+... .+|..+..++ +|++|.+.++.++. |..+ ..
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP~~f-~~ 610 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMPSNF-RP 610 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCCCcC-Cc
Confidence 4455554444333234456677899999999999766421 3677777665 59999999998887 6665 67
Q ss_pred CCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCC
Q 009194 130 KKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERL 209 (540)
Q Consensus 130 ~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l 209 (540)
.+|+.|++.++.+..+|.++..+++|+.|+++++..+..+|. ++.+++|+.|++++|... ...+..++++
T Consensus 611 ~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~--ls~l~~Le~L~L~~c~~L--------~~lp~si~~L 680 (1153)
T PLN03210 611 ENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPD--LSMATNLETLKLSDCSSL--------VELPSSIQYL 680 (1153)
T ss_pred cCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCc--cccCCcccEEEecCCCCc--------cccchhhhcc
Confidence 899999999999999999999999999999999877788885 789999999999987543 1345667889
Q ss_pred CCccEEEeecCC-CCCCCccccccCccEEEEEecCCCCCCCCccccccccccEEEEeccccccccccchhhhhhhcccce
Q 009194 210 TELTTLEIEVPD-AEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIKKVSILQENDGTKMLLQRTED 288 (540)
Q Consensus 210 ~~L~~L~l~~~~-~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~ 288 (540)
++|+.|++++|. ...+|..+ .+++|+.|.+++|.....++ ...++|+.
T Consensus 681 ~~L~~L~L~~c~~L~~Lp~~i-------------------------~l~sL~~L~Lsgc~~L~~~p------~~~~nL~~ 729 (1153)
T PLN03210 681 NKLEDLDMSRCENLEILPTGI-------------------------NLKSLYRLNLSGCSRLKSFP------DISTNISW 729 (1153)
T ss_pred CCCCEEeCCCCCCcCccCCcC-------------------------CCCCCCEEeCCCCCCccccc------cccCCcCe
Confidence 999999999875 56666543 23445555555533222221 12345666
Q ss_pred eeeccccCcccccccCccCCCCccccEEeeccccCceeeeccc---cccccccCcccceecccccccccccccccCCCCC
Q 009194 289 LWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHIVGSV---RRVRCEVFPLLEALSLMFLTNLETICYSQLREDQ 365 (540)
Q Consensus 289 L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~---~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~ 365 (540)
|.+.+.. ++. ++....+++|++|.+.++.... +.... .......+++|+.|++++|+.+.+++.. .+
T Consensus 730 L~L~~n~-i~~----lP~~~~l~~L~~L~l~~~~~~~-l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~s----i~ 799 (1153)
T PLN03210 730 LDLDETA-IEE----FPSNLRLENLDELILCEMKSEK-LWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSS----IQ 799 (1153)
T ss_pred eecCCCc-ccc----ccccccccccccccccccchhh-ccccccccchhhhhccccchheeCCCCCCccccChh----hh
Confidence 6665433 222 2212357788888887654211 11000 0002234578999999999988888765 67
Q ss_pred CCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCccCCCCcc
Q 009194 366 SFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLT 445 (540)
Q Consensus 366 ~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~ 445 (540)
.+++|+.|.+++|+.++.+|.. ..+++|++|++++|.++..++. ..++|+
T Consensus 800 ~L~~L~~L~Ls~C~~L~~LP~~---~~L~sL~~L~Ls~c~~L~~~p~---------------------------~~~nL~ 849 (1153)
T PLN03210 800 NLHKLEHLEIENCINLETLPTG---INLESLESLDLSGCSRLRTFPD---------------------------ISTNIS 849 (1153)
T ss_pred CCCCCCEEECCCCCCcCeeCCC---CCccccCEEECCCCCccccccc---------------------------cccccC
Confidence 8999999999999999988653 2689999999999988876530 136788
Q ss_pred EEEEccCCCcccccchhhhhhcCCCcEEEEecccccceeccccccCCCCccccccccceeecccCCCCCCC
Q 009194 446 KVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPKLSSF 516 (540)
Q Consensus 446 ~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~~L~~~~~~~~~~~~~~~~~~~~L~~L~l~~~p~L~~~ 516 (540)
.|++.+. +++.+|. .+..+++|+.|++.+|++++.++.. +..++.|+.+.+.+|++|+.+
T Consensus 850 ~L~Ls~n-~i~~iP~--si~~l~~L~~L~L~~C~~L~~l~~~--------~~~L~~L~~L~l~~C~~L~~~ 909 (1153)
T PLN03210 850 DLNLSRT-GIEEVPW--WIEKFSNLSFLDMNGCNNLQRVSLN--------ISKLKHLETVDFSDCGALTEA 909 (1153)
T ss_pred EeECCCC-CCccChH--HHhcCCCCCEEECCCCCCcCccCcc--------cccccCCCeeecCCCcccccc
Confidence 9998884 6777653 4688999999999999999987531 336788999999999988743
No 5
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.87 E-value=3.7e-22 Score=212.99 Aligned_cols=371 Identities=24% Similarity=0.336 Sum_probs=227.8
Q ss_pred CcchhhhHHHhhhc-----CCCEeEecCcchhhhhhhhhhcCCCeEEEccCCCCCCCCCcCCCCCccEEEcccCCCCCcc
Q 009194 1 MHDVIHVVAVSIAT-----EERMFNVPNVADLEKKMEETIQKDPIAISLPHRDIQELPERLQCPNLQLFLLYTEGNGPMQ 75 (540)
Q Consensus 1 mHdli~d~a~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~ 75 (540)
|||+|||||.++|+ +++++ +..+.+....|....+..+|++++.++.+..++....+++|++|.+.+|......
T Consensus 483 mHDvvRe~al~ias~~~~~~e~~i-v~~~~~~~~~~~~~~~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~ 561 (889)
T KOG4658|consen 483 MHDVVREMALWIASDFGKQEENQI-VSDGVGLSEIPQVKSWNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLE 561 (889)
T ss_pred eeHHHHHHHHHHhccccccccceE-EECCcCccccccccchhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhh
Confidence 89999999999999 66644 5544444445666667889999999999999998889999999999998621366
Q ss_pred ccHHHHhcCccCcEEEcCCCC-CCCCCcccccCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCC-CCcccchhcCCC
Q 009194 76 VSDHFFEGMEGLKVLQFPGIG-SSSLPSSLGRLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYS-NINQLPVEIGQL 152 (540)
Q Consensus 76 ~~~~~~~~l~~L~~L~l~~~~-~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~-~~~~lp~~~~~l 152 (540)
++.++|..++.|++||+++|. ..++|..++++.+||||+++++.++. |..+++|+.|.+|++..+ ....+|.....|
T Consensus 562 is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L 641 (889)
T KOG4658|consen 562 ISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLEL 641 (889)
T ss_pred cCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHHHhhheeccccccccccccchhhhc
Confidence 777888999999999999874 56788888888888888888888887 788888888888888776 344444445557
Q ss_pred CCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCcccccc
Q 009194 153 TRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSV 232 (540)
Q Consensus 153 ~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~ 232 (540)
++||+|.+.... . . .+.....++.++.+|+.+.+..... .+...+
T Consensus 642 ~~Lr~L~l~~s~-~-~-----------------------------~~~~~l~el~~Le~L~~ls~~~~s~-~~~e~l--- 686 (889)
T KOG4658|consen 642 QSLRVLRLPRSA-L-S-----------------------------NDKLLLKELENLEHLENLSITISSV-LLLEDL--- 686 (889)
T ss_pred ccccEEEeeccc-c-c-----------------------------cchhhHHhhhcccchhhheeecchh-HhHhhh---
Confidence 777777765432 0 0 0111223333344444433332221 000000
Q ss_pred CccEEEEEecCCCCCCCCccccccccccEEEEeccccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCcc
Q 009194 233 ELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPR 312 (540)
Q Consensus 233 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 312 (540)
.....|..+. +.+.+..+...+. ......+.+
T Consensus 687 ---------------------~~~~~L~~~~-----------------------~~l~~~~~~~~~~----~~~~~~l~~ 718 (889)
T KOG4658|consen 687 ---------------------LGMTRLRSLL-----------------------QSLSIEGCSKRTL----ISSLGSLGN 718 (889)
T ss_pred ---------------------hhhHHHHHHh-----------------------Hhhhhccccccee----ecccccccC
Confidence 0000111000 1111111111111 111556777
Q ss_pred ccEEeeccccCceeeeccccccccc-cCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHh
Q 009194 313 LKRLLVTDCSEILHIVGSVRRVRCE-VFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAK 391 (540)
Q Consensus 313 L~~L~l~~~~~l~~~~~~~~~~~~~-~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~ 391 (540)
|+.|.|.+|...+............ .|+++..+.+.+|...++..+.. -.|+|+.|.+..|+.+.+..+. ..
T Consensus 719 L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~-----f~~~L~~l~l~~~~~~e~~i~~--~k 791 (889)
T KOG4658|consen 719 LEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLL-----FAPHLTSLSLVSCRLLEDIIPK--LK 791 (889)
T ss_pred cceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhh-----ccCcccEEEEecccccccCCCH--HH
Confidence 7888888775433221111111112 37889999999998888877643 3589999999999888887543 44
Q ss_pred hcccccEEEEcccccccccc-ccCCCCCCCccceeeecccCCCCCCCccCCCCccEEEEccCCCcccccchhhhhhcCCC
Q 009194 392 NLLRLQKVKVEDCDDLKMII-GPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQL 470 (540)
Q Consensus 392 ~l~~L~~L~l~~c~~l~~~~-~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L 470 (540)
.+..+..+.+. ++.+.... ....+.++++..+ .-.++.|+.+.+..||+++.+ |.+
T Consensus 792 ~~~~l~~~i~~-f~~~~~l~~~~~l~~l~~i~~~-------------~l~~~~l~~~~ve~~p~l~~~---------P~~ 848 (889)
T KOG4658|consen 792 ALLELKELILP-FNKLEGLRMLCSLGGLPQLYWL-------------PLSFLKLEELIVEECPKLGKL---------PLL 848 (889)
T ss_pred HhhhcccEEec-ccccccceeeecCCCCceeEec-------------ccCccchhheehhcCcccccC---------ccc
Confidence 55555553332 23333331 1222222222111 112455888888888888776 677
Q ss_pred cEEEEecc-cccceec
Q 009194 471 QHLEIRNC-RSIEGVV 485 (540)
Q Consensus 471 ~~L~i~~C-~~L~~~~ 485 (540)
.++.|.+| +.+...+
T Consensus 849 ~~~~i~~~~~~~~~~~ 864 (889)
T KOG4658|consen 849 STLTIVGCEEKLKEYP 864 (889)
T ss_pred cccceeccccceeecC
Confidence 78888887 5555543
No 6
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.87 E-value=1.2e-22 Score=196.02 Aligned_cols=371 Identities=18% Similarity=0.181 Sum_probs=257.1
Q ss_pred hhhcCCCeEEEccCCCCCCCCCcC----CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCC
Q 009194 33 ETIQKDPIAISLPHRDIQELPERL----QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLI 108 (540)
Q Consensus 33 ~~~~~~l~~l~l~~~~~~~l~~~~----~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~ 108 (540)
+..+-..+-++.++..++.+.... -.+..++|++++|.. ..+-...|.++++|+.+++.+|.++.+|.......
T Consensus 48 a~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl--~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sg 125 (873)
T KOG4194|consen 48 ATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKL--SHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESG 125 (873)
T ss_pred CcCCCCceeeecCccccccccccccCCcCccceeeeecccccc--ccCcHHHHhcCCcceeeeeccchhhhccccccccc
Confidence 345667888899988887653321 234567899999997 55555567899999999999999999999888888
Q ss_pred CCcEEEcCCCccCC--cccccCCCCCCEEEecCCCCcccchh-cCCCCCCCEEECCCCccccccchhhhhcCCccceEEc
Q 009194 109 NLQTLCLDWCELAD--IAAIGQLKKLEILSLAYSNINQLPVE-IGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYM 185 (540)
Q Consensus 109 ~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l 185 (540)
||+.|++.+|.|+. -+.+.-++.|+.||++.|.+..+|.. +..-.++++|++++|. ++.+....+..+.+|..|.+
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~-It~l~~~~F~~lnsL~tlkL 204 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNR-ITTLETGHFDSLNSLLTLKL 204 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccc-ccccccccccccchheeeec
Confidence 99999999999987 38899999999999999999988765 6666899999999988 66766666788889999999
Q ss_pred cCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccc--cCccEEEEEecCCCCCCCCccccccccccEEE
Q 009194 186 GNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVS--VELQRYKIRIGDGPEDEFDPLLVKSEASRLMM 263 (540)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~--~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~ 263 (540)
+.|.++..+ +..|+++++|+.|++..|.+..+...... ++|+.+.+..+++...
T Consensus 205 srNrittLp--------~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL---------------- 260 (873)
T KOG4194|consen 205 SRNRITTLP--------QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKL---------------- 260 (873)
T ss_pred ccCcccccC--------HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccc----------------
Confidence 999887322 35678899999999998886543221111 4455554433332221
Q ss_pred EeccccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeeccccCceeeeccccccccccCcccc
Q 009194 264 LKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLE 343 (540)
Q Consensus 264 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~ 343 (540)
.+|....+.++++|.+.... +..+... .+-++..|+.|+++.. .+..+-.+ .=..+++|+
T Consensus 261 ------------~DG~Fy~l~kme~l~L~~N~-l~~vn~g--~lfgLt~L~~L~lS~N-aI~rih~d----~WsftqkL~ 320 (873)
T KOG4194|consen 261 ------------DDGAFYGLEKMEHLNLETNR-LQAVNEG--WLFGLTSLEQLDLSYN-AIQRIHID----SWSFTQKLK 320 (873)
T ss_pred ------------cCcceeeecccceeecccch-hhhhhcc--cccccchhhhhccchh-hhheeecc----hhhhcccce
Confidence 23333334555555554322 1111110 1346778888888776 44444221 224567888
Q ss_pred eecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccc
Q 009194 344 ALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQG 423 (540)
Q Consensus 344 ~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~ 423 (540)
.|++++ ++++.+..+. +..+..|++|+++. +++..+. .+.+..+.+|++|+++. +.+....
T Consensus 321 ~LdLs~-N~i~~l~~~s---f~~L~~Le~LnLs~-Nsi~~l~-e~af~~lssL~~LdLr~-N~ls~~I------------ 381 (873)
T KOG4194|consen 321 ELDLSS-NRITRLDEGS---FRVLSQLEELNLSH-NSIDHLA-EGAFVGLSSLHKLDLRS-NELSWCI------------ 381 (873)
T ss_pred eEeccc-cccccCChhH---HHHHHHhhhhcccc-cchHHHH-hhHHHHhhhhhhhcCcC-CeEEEEE------------
Confidence 888876 6777777665 45677888888887 4677763 34556778888888886 4443321
Q ss_pred eeeecccCCCCCCCccCCCCccEEEEccCCCcccccchhhhhhcCCCcEEEEeccc
Q 009194 424 FIEINAEDDPVHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCR 479 (540)
Q Consensus 424 l~~i~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~ 479 (540)
.+ .......+++|++|.+.+ .+++.++.. .+.++++||+|++.+-+
T Consensus 382 ----ED----aa~~f~gl~~LrkL~l~g-Nqlk~I~kr-Afsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 382 ----ED----AAVAFNGLPSLRKLRLTG-NQLKSIPKR-AFSGLEALEHLDLGDNA 427 (873)
T ss_pred ----ec----chhhhccchhhhheeecC-ceeeecchh-hhccCcccceecCCCCc
Confidence 11 112233578888888888 578888653 46778889999887643
No 7
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.86 E-value=6.8e-23 Score=197.65 Aligned_cols=353 Identities=16% Similarity=0.143 Sum_probs=267.0
Q ss_pred hhcCCCeEEEccCCCCCCCCC--cCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCC-cccccCCCC
Q 009194 34 TIQKDPIAISLPHRDIQELPE--RLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLP-SSLGRLINL 110 (540)
Q Consensus 34 ~~~~~l~~l~l~~~~~~~l~~--~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~-~~l~~l~~L 110 (540)
..+...+.|++++|.+..+.. +.++++|+.+.+..|.. ..+|... ....+|+.|++.+|.|..+. +.+..++.|
T Consensus 75 ~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~L--t~IP~f~-~~sghl~~L~L~~N~I~sv~se~L~~l~al 151 (873)
T KOG4194|consen 75 FLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNEL--TRIPRFG-HESGHLEKLDLRHNLISSVTSEELSALPAL 151 (873)
T ss_pred cCccceeeeeccccccccCcHHHHhcCCcceeeeeccchh--hhccccc-ccccceeEEeeeccccccccHHHHHhHhhh
Confidence 456778899999999966543 45999999999999986 7777522 33556999999999998764 467889999
Q ss_pred cEEEcCCCccCC-c-ccccCCCCCCEEEecCCCCcccchh-cCCCCCCCEEECCCCccccccchhhhhcCCccceEEccC
Q 009194 111 QTLCLDWCELAD-I-AAIGQLKKLEILSLAYSNINQLPVE-IGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGN 187 (540)
Q Consensus 111 ~~L~l~~~~~~~-~-~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~ 187 (540)
|+||++.|.++. + ..+..-.++++|++++|.|+.+..+ +..+.+|..|.+++|. +..+|...+.++++|+.|++..
T Consensus 152 rslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNr-ittLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 152 RSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNR-ITTLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCc-ccccCHHHhhhcchhhhhhccc
Confidence 999999999988 4 7788888999999999999977655 8889999999999998 8899998888999999999999
Q ss_pred CCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccc--cCccEEEEEecCC----CCCCCCccccccccccE
Q 009194 188 GFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVS--VELQRYKIRIGDG----PEDEFDPLLVKSEASRL 261 (540)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~--~~L~~L~l~~~~~----~~~~~~~~~~~~~~L~~ 261 (540)
|.+... ....|..+++|+.|.+..|++..+..+... .+++.|++..+.. ..| +..++.|+.
T Consensus 231 N~iriv--------e~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~-----lfgLt~L~~ 297 (873)
T KOG4194|consen 231 NRIRIV--------EGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGW-----LFGLTSLEQ 297 (873)
T ss_pred cceeee--------hhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccc-----ccccchhhh
Confidence 887622 124678899999999999998888777544 8999999976553 235 778899999
Q ss_pred EEEeccccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeeccccCceeeeccccccccccCcc
Q 009194 262 MMLKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPL 341 (540)
Q Consensus 262 L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~ 341 (540)
|+++... +..++...| ...++|+.|+++... ++.+... .+..+..|+.|.+++. .+..+.+. ...++.+
T Consensus 298 L~lS~Na-I~rih~d~W--sftqkL~~LdLs~N~-i~~l~~~--sf~~L~~Le~LnLs~N-si~~l~e~----af~~lss 366 (873)
T KOG4194|consen 298 LDLSYNA-IQRIHIDSW--SFTQKLKELDLSSNR-ITRLDEG--SFRVLSQLEELNLSHN-SIDHLAEG----AFVGLSS 366 (873)
T ss_pred hccchhh-hheeecchh--hhcccceeEeccccc-cccCChh--HHHHHHHhhhhccccc-chHHHHhh----HHHHhhh
Confidence 9998722 244443333 346899999987643 3333111 1456789999999887 55555332 5567889
Q ss_pred cceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccccccCCCCC
Q 009194 342 LEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKP 418 (540)
Q Consensus 342 L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~ 418 (540)
|+.|+++. +++...-......+..+++|+.|.+.+ ++++.++- ..+..+++||+|++-+ +-+.++-...++..
T Consensus 367 L~~LdLr~-N~ls~~IEDaa~~f~gl~~LrkL~l~g-Nqlk~I~k-rAfsgl~~LE~LdL~~-NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 367 LHKLDLRS-NELSWCIEDAAVAFNGLPSLRKLRLTG-NQLKSIPK-RAFSGLEALEHLDLGD-NAIASIQPNAFEPM 439 (873)
T ss_pred hhhhcCcC-CeEEEEEecchhhhccchhhhheeecC-ceeeecch-hhhccCcccceecCCC-Ccceeecccccccc
Confidence 99999986 333221111111155699999999999 58999954 4567899999999988 55666665555544
No 8
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.82 E-value=4.4e-22 Score=193.51 Aligned_cols=340 Identities=21% Similarity=0.239 Sum_probs=206.9
Q ss_pred cCCCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCC--CCCcccccCCCCcE
Q 009194 36 QKDPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSS--SLPSSLGRLINLQT 112 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~--~l~~~l~~l~~L~~ 112 (540)
...++.|.+....+..+|+-. .+.+|++|.+..|.. .++..+. +.++.||.+.++.|++. .+|..+-.+.-|.+
T Consensus 31 Mt~~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN~L--~~vhGEL-s~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~ 107 (1255)
T KOG0444|consen 31 MTQMTWLKLNRTKLEQVPEELSRLQKLEHLSMAHNQL--ISVHGEL-SDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTI 107 (1255)
T ss_pred hhheeEEEechhhhhhChHHHHHHhhhhhhhhhhhhh--Hhhhhhh-ccchhhHHHhhhccccccCCCCchhccccccee
Confidence 445677777777777777633 777888888888775 4555544 67888888888888764 57777778888888
Q ss_pred EEcCCCccCC-cccccCCCCCCEEEecCCCCcccchh-cCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCc
Q 009194 113 LCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVE-IGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFS 190 (540)
Q Consensus 113 L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 190 (540)
|++++|.+++ |..+...+++-+|+++.|+|.++|.. +-+++.|-.||+++|. ++.+|++ ++++..|+.|.+++|..
T Consensus 108 lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~Nr-Le~LPPQ-~RRL~~LqtL~Ls~NPL 185 (1255)
T KOG0444|consen 108 LDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNR-LEMLPPQ-IRRLSMLQTLKLSNNPL 185 (1255)
T ss_pred eecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccch-hhhcCHH-HHHHhhhhhhhcCCChh
Confidence 8888888777 78888888888888888888888876 5678888888888877 7788887 78888888888888766
Q ss_pred ccccccCCCccchhhccCCCCccEEEeecCC--CCCCCccccc-cCccEEEEEecCCCCCCCCccccccccccEEEEecc
Q 009194 191 GWEKVEGGSNASLVELERLTELTTLEIEVPD--AEILPPDFVS-VELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGI 267 (540)
Q Consensus 191 ~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~ 267 (540)
.. .-+.++..+..|+.|.+++.. ...+|..+-. .+|..+.++.++.+..+ ......++|+.|.+++
T Consensus 186 ~h--------fQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vP--ecly~l~~LrrLNLS~- 254 (1255)
T KOG0444|consen 186 NH--------FQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVP--ECLYKLRNLRRLNLSG- 254 (1255)
T ss_pred hH--------HHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcch--HHHhhhhhhheeccCc-
Confidence 41 112344455566677777665 4566666544 67777777665544331 1144566777777766
Q ss_pred ccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeeccccCceeeeccccccccccCcccceecc
Q 009194 268 KKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSL 347 (540)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l 347 (540)
+.+.........-.+|+.|.++...- +..... ...++.|+.|++.+. +++.-+ ...+.+.+..|+.+..
T Consensus 255 ---N~iteL~~~~~~W~~lEtLNlSrNQL-t~LP~a---vcKL~kL~kLy~n~N-kL~FeG---iPSGIGKL~~Levf~a 323 (1255)
T KOG0444|consen 255 ---NKITELNMTEGEWENLETLNLSRNQL-TVLPDA---VCKLTKLTKLYANNN-KLTFEG---IPSGIGKLIQLEVFHA 323 (1255)
T ss_pred ---CceeeeeccHHHHhhhhhhccccchh-ccchHH---HhhhHHHHHHHhccC-cccccC---CccchhhhhhhHHHHh
Confidence 22221111111124445554443221 111111 234556666655544 232211 1114445555555555
Q ss_pred cccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccc
Q 009194 348 MFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMI 410 (540)
Q Consensus 348 ~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~ 410 (540)
.+ +.++-.|.+ ...|++|+.|++.. +++-.+|. .+.-++-|+.|++...+++.--
T Consensus 324 an-N~LElVPEg----lcRC~kL~kL~L~~-NrLiTLPe--aIHlL~~l~vLDlreNpnLVMP 378 (1255)
T KOG0444|consen 324 AN-NKLELVPEG----LCRCVKLQKLKLDH-NRLITLPE--AIHLLPDLKVLDLRENPNLVMP 378 (1255)
T ss_pred hc-cccccCchh----hhhhHHHHHhcccc-cceeechh--hhhhcCCcceeeccCCcCccCC
Confidence 54 344444433 44566666666653 45555533 2455566666666666666543
No 9
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.80 E-value=2.1e-21 Score=188.82 Aligned_cols=366 Identities=19% Similarity=0.213 Sum_probs=229.9
Q ss_pred hcCCCeEEEccCCCC--CCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCc
Q 009194 35 IQKDPIAISLPHRDI--QELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQ 111 (540)
Q Consensus 35 ~~~~l~~l~l~~~~~--~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~ 111 (540)
+.+-+|-+++++|++ ..+|... .+..++-|-+..... ..+|.+. +.+.+|..|++.+|++..+-..++.++.||
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L--~~vPeEL-~~lqkLEHLs~~HN~L~~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKL--EQVPEEL-SRLQKLEHLSMAHNQLISVHGELSDLPRLR 81 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhh--hhChHHH-HHHhhhhhhhhhhhhhHhhhhhhccchhhH
Confidence 456689999999998 4567655 778888888887775 7788776 889999999999999877766678889999
Q ss_pred EEEcCCCccCC---cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCC
Q 009194 112 TLCLDWCELAD---IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNG 188 (540)
Q Consensus 112 ~L~l~~~~~~~---~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 188 (540)
.+.+++|.+.. |..|.++..|.+||++.|++++.|..+..-+++-.|++++|. ++.+|..++-+++.|-.|++++|
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~-IetIPn~lfinLtDLLfLDLS~N 160 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNN-IETIPNSLFINLTDLLFLDLSNN 160 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCc-cccCCchHHHhhHhHhhhccccc
Confidence 99999998763 788999999999999999999999999999999999999988 88999888888999999999988
Q ss_pred CcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccccCccEEEEEecCCCCCCCCccccccccccEEEEeccc
Q 009194 189 FSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIK 268 (540)
Q Consensus 189 ~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 268 (540)
... ..+++...+.+|++|++++|+...+.-. -+..+++|+.|++++..
T Consensus 161 rLe---------~LPPQ~RRL~~LqtL~Ls~NPL~hfQLr-----------------------QLPsmtsL~vLhms~Tq 208 (1255)
T KOG0444|consen 161 RLE---------MLPPQIRRLSMLQTLKLSNNPLNHFQLR-----------------------QLPSMTSLSVLHMSNTQ 208 (1255)
T ss_pred hhh---------hcCHHHHHHhhhhhhhcCCChhhHHHHh-----------------------cCccchhhhhhhccccc
Confidence 776 5678888888999999998875432211 02234556666666511
Q ss_pred c-ccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeeccccCceeeeccccccccccCcccceecc
Q 009194 269 K-VSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSL 347 (540)
Q Consensus 269 ~-~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l 347 (540)
. ..++ |..+ ..+.+|..++++. .++..+... +-.+++|+.|.+++. +++.+.. ..+...+|+.|.+
T Consensus 209 RTl~N~--Ptsl-d~l~NL~dvDlS~-N~Lp~vPec---ly~l~~LrrLNLS~N-~iteL~~-----~~~~W~~lEtLNl 275 (1255)
T KOG0444|consen 209 RTLDNI--PTSL-DDLHNLRDVDLSE-NNLPIVPEC---LYKLRNLRRLNLSGN-KITELNM-----TEGEWENLETLNL 275 (1255)
T ss_pred chhhcC--CCch-hhhhhhhhccccc-cCCCcchHH---HhhhhhhheeccCcC-ceeeeec-----cHHHHhhhhhhcc
Confidence 1 0011 1110 1123333333321 111111111 224455555555554 3333321 2333445555555
Q ss_pred cccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccceeee
Q 009194 348 MFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEI 427 (540)
Q Consensus 348 ~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i 427 (540)
+. +.++.+|.. .-.+++|+.|.+.+ ++++.-..++++..+..|+.+...+ ++++-
T Consensus 276 Sr-NQLt~LP~a----vcKL~kL~kLy~n~-NkL~FeGiPSGIGKL~~Levf~aan-N~LEl------------------ 330 (1255)
T KOG0444|consen 276 SR-NQLTVLPDA----VCKLTKLTKLYANN-NKLTFEGIPSGIGKLIQLEVFHAAN-NKLEL------------------ 330 (1255)
T ss_pred cc-chhccchHH----HhhhHHHHHHHhcc-CcccccCCccchhhhhhhHHHHhhc-ccccc------------------
Confidence 54 344444433 33345555555444 2333322233344444455444443 33332
Q ss_pred cccCCCCCCCccCCCCccEEEEccCCCcccccchhhhhhcCCCcEEEEecccccce
Q 009194 428 NAEDDPVHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEG 483 (540)
Q Consensus 428 ~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~~L~~ 483 (540)
.+.++..+++|+.|.+. |..|-.+| ..++-++.|+.|+++.-|+|.-
T Consensus 331 ------VPEglcRC~kL~kL~L~-~NrLiTLP--eaIHlL~~l~vLDlreNpnLVM 377 (1255)
T KOG0444|consen 331 ------VPEGLCRCVKLQKLKLD-HNRLITLP--EAIHLLPDLKVLDLRENPNLVM 377 (1255)
T ss_pred ------CchhhhhhHHHHHhccc-ccceeech--hhhhhcCCcceeeccCCcCccC
Confidence 34455556666666654 34555553 3345667777777776666543
No 10
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.79 E-value=4.9e-21 Score=194.46 Aligned_cols=162 Identities=19% Similarity=0.300 Sum_probs=102.3
Q ss_pred CCCCccccEEeeccccCceeeecccc---------------------ccccccCcccceecccccccccccccccCCCCC
Q 009194 307 GEGFPRLKRLLVTDCSEILHIVGSVR---------------------RVRCEVFPLLEALSLMFLTNLETICYSQLREDQ 365 (540)
Q Consensus 307 ~~~~~~L~~L~l~~~~~l~~~~~~~~---------------------~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~ 365 (540)
.+.+..|+.|++... ++...++... ......++.|+.|.+.+ +.+++-++.. +.
T Consensus 306 le~~~sL~tLdL~~N-~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lylan-N~Ltd~c~p~---l~ 380 (1081)
T KOG0618|consen 306 LEGLKSLRTLDLQSN-NLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLAN-NHLTDSCFPV---LV 380 (1081)
T ss_pred ccccceeeeeeehhc-cccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhc-Ccccccchhh---hc
Confidence 345778888888765 4443322100 11344556677777776 5677666654 66
Q ss_pred CCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCccCCCCcc
Q 009194 366 SFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLT 445 (540)
Q Consensus 366 ~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~ 445 (540)
.|++||.|++++ +++..+ |.....++..|++|.++| ++++.++ +.+..++.|+
T Consensus 381 ~~~hLKVLhLsy-NrL~~f-pas~~~kle~LeeL~LSG-NkL~~Lp------------------------~tva~~~~L~ 433 (1081)
T KOG0618|consen 381 NFKHLKVLHLSY-NRLNSF-PASKLRKLEELEELNLSG-NKLTTLP------------------------DTVANLGRLH 433 (1081)
T ss_pred cccceeeeeecc-cccccC-CHHHHhchHHhHHHhccc-chhhhhh------------------------HHHHhhhhhH
Confidence 789999999988 578877 456678888899999998 6777664 2233455666
Q ss_pred EEEEccCCCcccccchhhhhhcCCCcEEEEecccccceeccccccCCCCccccccccceeecccCCC
Q 009194 446 KVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPK 512 (540)
Q Consensus 446 ~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~~L~~~~~~~~~~~~~~~~~~~~L~~L~l~~~p~ 512 (540)
.|...+ ..|..+| -+..+++|+.+|++ |.+|..+...+..+ -|.|++|++.|-+.
T Consensus 434 tL~ahs-N~l~~fP---e~~~l~qL~~lDlS-~N~L~~~~l~~~~p-------~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 434 TLRAHS-NQLLSFP---ELAQLPQLKVLDLS-CNNLSEVTLPEALP-------SPNLKYLDLSGNTR 488 (1081)
T ss_pred HHhhcC-Cceeech---hhhhcCcceEEecc-cchhhhhhhhhhCC-------CcccceeeccCCcc
Confidence 654443 2344443 23456777777774 67777765544433 16777777776664
No 11
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.75 E-value=3.4e-21 Score=178.16 Aligned_cols=260 Identities=24% Similarity=0.236 Sum_probs=185.5
Q ss_pred CCeEEEccCCCCCCCCC-cCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcC
Q 009194 38 DPIAISLPHRDIQELPE-RLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLD 116 (540)
Q Consensus 38 ~l~~l~l~~~~~~~l~~-~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~ 116 (540)
.+..+.++.|+++.+.+ ..++..+.++.+.+|.. .+.|.++ +.+..++.++++++.+..+|+.++.+..|+.++.+
T Consensus 46 ~l~~lils~N~l~~l~~dl~nL~~l~vl~~~~n~l--~~lp~ai-g~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLREDLKNLACLTVLNVHDNKL--SQLPAAI-GELEALKSLNVSHNKLSELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchhhccHhhhcccceeEEEeccchh--hhCCHHH-HHHHHHHHhhcccchHhhccHHHhhhhhhhhhhcc
Confidence 35677788888866544 44788888888888885 6777776 78888888899988888888888888888889888
Q ss_pred CCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccc
Q 009194 117 WCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKV 195 (540)
Q Consensus 117 ~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~ 195 (540)
++.+.. +++++.+..|..++...|++.++|.++..+.+|..+++.++. ....|+..+. ++.|++++...|...
T Consensus 123 ~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~-l~~l~~~~i~-m~~L~~ld~~~N~L~---- 196 (565)
T KOG0472|consen 123 SNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNK-LKALPENHIA-MKRLKHLDCNSNLLE---- 196 (565)
T ss_pred ccceeecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccc-hhhCCHHHHH-HHHHHhcccchhhhh----
Confidence 888877 788888888888888888888888888888888888888877 7777777444 888888887776554
Q ss_pred cCCCccchhhccCCCCccEEEeecCCCCCCCccccccCccEEEEEecCCCCCCCCccccccccccEEEEecccccccc-c
Q 009194 196 EGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIKKVSIL-Q 274 (540)
Q Consensus 196 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~ 274 (540)
..+++++.+.+|..|++..|++..+|..-.+..|+.|++....+... ......+++++..|++.. ..+ .
T Consensus 197 -----tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~l-pae~~~~L~~l~vLDLRd----Nklke 266 (565)
T KOG0472|consen 197 -----TLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEML-PAEHLKHLNSLLVLDLRD----NKLKE 266 (565)
T ss_pred -----cCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhh-HHHHhcccccceeeeccc----ccccc
Confidence 56777888888888888888877777544446677666643332211 112244667777777766 222 2
Q ss_pred cchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeecccc
Q 009194 275 ENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCS 322 (540)
Q Consensus 275 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 322 (540)
.|+++. .+++|+.|++++.. +..... .++++ .|+.|.+.+.|
T Consensus 267 ~Pde~c-lLrsL~rLDlSNN~-is~Lp~---sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 267 VPDEIC-LLRSLERLDLSNND-ISSLPY---SLGNL-HLKFLALEGNP 308 (565)
T ss_pred CchHHH-HhhhhhhhcccCCc-cccCCc---ccccc-eeeehhhcCCc
Confidence 233332 35677777776532 122111 25566 77777777765
No 12
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.75 E-value=3e-21 Score=178.47 Aligned_cols=410 Identities=18% Similarity=0.215 Sum_probs=207.9
Q ss_pred CCCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEc
Q 009194 37 KDPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCL 115 (540)
Q Consensus 37 ~~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l 115 (540)
..+..+.+++|...++|..+ ....+..++.+.|.. .++|..+ .....|+.++++++.+.++|+.++.+..|..++.
T Consensus 68 ~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~l--s~lp~~i-~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKL--SELPEQI-GSLISLVKLDCSSNELKELPDSIGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhhhCCHHHHHHHHHHHhhcccchH--hhccHHH-hhhhhhhhhhccccceeecCchHHHHhhhhhhhc
Confidence 33455666666555554433 455555555555553 4455444 4555555555555555555555555555555555
Q ss_pred CCCccCC-cccccCCCCCCEEEecCCCCc-----------------------ccchhcCCCCCCCEEECCCCccccccch
Q 009194 116 DWCELAD-IAAIGQLKKLEILSLAYSNIN-----------------------QLPVEIGQLTRLQLLDLSNCWWLEVIAP 171 (540)
Q Consensus 116 ~~~~~~~-~~~i~~l~~L~~L~l~~~~~~-----------------------~lp~~~~~l~~L~~L~l~~~~~~~~~~~ 171 (540)
.+|.++. |+.+..+.+|..+++.+|.++ .+|+.++.+.+|..|++..|. +..+|.
T Consensus 145 ~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nk-i~~lPe 223 (565)
T KOG0472|consen 145 TNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNK-IRFLPE 223 (565)
T ss_pred cccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcc-cccCCC
Confidence 5555544 455555555555555555444 444444444444444444444 444442
Q ss_pred hhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccc-cCccEEEEEecCCCCCCCC
Q 009194 172 NVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVS-VELQRYKIRIGDGPEDEFD 250 (540)
Q Consensus 172 ~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~ 250 (540)
++.+..|.+|.++.|.+... -.+.+++++++..||+..|+...+|.++.. .+|++|.++..++....
T Consensus 224 --f~gcs~L~Elh~g~N~i~~l--------pae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp-- 291 (565)
T KOG0472|consen 224 --FPGCSLLKELHVGENQIEML--------PAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLP-- 291 (565)
T ss_pred --CCccHHHHHHHhcccHHHhh--------HHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCC--
Confidence 44455555555444444311 123346889999999999999999999877 88999999887765541
Q ss_pred ccccccccccEEEEecccccccccc---chhhhhhhcccce-eeeccccC---cccccc-----cCccCCCCccccEEee
Q 009194 251 PLLVKSEASRLMMLKGIKKVSILQE---NDGTKMLLQRTED-LWLETLEG---VQSVVH-----ELDDGEGFPRLKRLLV 318 (540)
Q Consensus 251 ~~~~~~~~L~~L~l~~~~~~~~~~~---~~~~~~~~~~L~~-L~l~~~~~---~~~~~~-----~~~~~~~~~~L~~L~l 318 (540)
+..+.+ +|+.|.+.|.|- ..++. ..|....++-|+. ..-.+.+. .+.... .++.....-..+.|.+
T Consensus 292 ~sLgnl-hL~~L~leGNPl-rTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~ 369 (565)
T KOG0472|consen 292 YSLGNL-HLKFLALEGNPL-RTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDV 369 (565)
T ss_pred cccccc-eeeehhhcCCch-HHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcc
Confidence 224445 777777777442 22211 2233333332222 11111111 111101 1111222336667777
Q ss_pred ccccCceeeeccccccccccCcccceecccc----------------------cccccccccccCCCCCCCCCCCeEEEe
Q 009194 319 TDCSEILHIVGSVRRVRCEVFPLLEALSLMF----------------------LTNLETICYSQLREDQSFSNLRIINVD 376 (540)
Q Consensus 319 ~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~----------------------c~~l~~~~~~~~~~~~~~~~L~~L~l~ 376 (540)
++- +++.+++... ..+.---....+++. -.+..+|.... ...+++|..|+++
T Consensus 370 s~~-qlt~VPdEVf--ea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~---l~~l~kLt~L~L~ 443 (565)
T KOG0472|consen 370 SDK-QLTLVPDEVF--EAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLE---LSQLQKLTFLDLS 443 (565)
T ss_pred ccc-ccccCCHHHH--HHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHH---HHhhhcceeeecc
Confidence 665 4555533211 000000011111111 01122222222 5678999999998
Q ss_pred eCCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccceeeec-ccCCC-CCCCccCCCCccEEEEccCCC
Q 009194 377 SCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEIN-AEDDP-VHQGIYCCQNLTKVTVWSCHR 454 (540)
Q Consensus 377 ~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~-~~~~~-~~~~~~~~~~L~~L~l~~C~~ 454 (540)
+ +-+.++|.. ...+.+|+.|+++. +.....|..-- ....+..+ .++ +.... -.+++.++.+|..|++.+ ..
T Consensus 444 N-N~Ln~LP~e--~~~lv~Lq~LnlS~-NrFr~lP~~~y-~lq~lEtl-las~nqi~~vd~~~l~nm~nL~tLDL~n-Nd 516 (565)
T KOG0472|consen 444 N-NLLNDLPEE--MGSLVRLQTLNLSF-NRFRMLPECLY-ELQTLETL-LASNNQIGSVDPSGLKNMRNLTTLDLQN-ND 516 (565)
T ss_pred c-chhhhcchh--hhhhhhhheecccc-cccccchHHHh-hHHHHHHH-HhccccccccChHHhhhhhhcceeccCC-Cc
Confidence 8 467888654 34567799999987 35555441100 00000000 000 00000 122345666777777666 34
Q ss_pred cccccchhhhhhcCCCcEEEEeccc
Q 009194 455 LKYLFSYSMVNSLGQLQHLEIRNCR 479 (540)
Q Consensus 455 l~~l~~~~~~~~l~~L~~L~i~~C~ 479 (540)
+..+| ..++++++|++|+++|-|
T Consensus 517 lq~IP--p~LgnmtnL~hLeL~gNp 539 (565)
T KOG0472|consen 517 LQQIP--PILGNMTNLRHLELDGNP 539 (565)
T ss_pred hhhCC--hhhccccceeEEEecCCc
Confidence 55654 346777777777777754
No 13
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.70 E-value=3.6e-19 Score=181.04 Aligned_cols=87 Identities=23% Similarity=0.281 Sum_probs=70.0
Q ss_pred CCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcC
Q 009194 38 DPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLD 116 (540)
Q Consensus 38 ~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~ 116 (540)
++.+|++++|.+..+|.-+ .++.|+.|.++.|.+ ..++.+. +++++|+++.+.+|....+|.++.++++|++|+++
T Consensus 46 ~L~~l~lsnn~~~~fp~~it~l~~L~~ln~s~n~i--~~vp~s~-~~~~~l~~lnL~~n~l~~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQISSFPIQITLLSHLRQLNLSRNYI--RSVPSSC-SNMRNLQYLNLKNNRLQSLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccccCCchhhhHHHHhhcccchhhH--hhCchhh-hhhhcchhheeccchhhcCchhHHhhhcccccccc
Confidence 4888999988888887755 778889999988886 6666554 78899999999999888889888999999999998
Q ss_pred CCccCC-ccccc
Q 009194 117 WCELAD-IAAIG 127 (540)
Q Consensus 117 ~~~~~~-~~~i~ 127 (540)
.|.+.. |..+.
T Consensus 123 ~N~f~~~Pl~i~ 134 (1081)
T KOG0618|consen 123 FNHFGPIPLVIE 134 (1081)
T ss_pred hhccCCCchhHH
Confidence 887655 44333
No 14
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.64 E-value=3.1e-18 Score=140.53 Aligned_cols=170 Identities=26% Similarity=0.395 Sum_probs=129.4
Q ss_pred CCCCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCC-cccc
Q 009194 48 DIQELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELAD-IAAI 126 (540)
Q Consensus 48 ~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~i 126 (540)
.+++++..+.+.+++.|.++.|.. ..++..+ ..+.+|++|++.+|+++++|.+++.+++|+.|++.-|++.. |..|
T Consensus 22 sf~~~~gLf~~s~ITrLtLSHNKl--~~vppni-a~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgf 98 (264)
T KOG0617|consen 22 SFEELPGLFNMSNITRLTLSHNKL--TVVPPNI-AELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGF 98 (264)
T ss_pred cHhhcccccchhhhhhhhcccCce--eecCCcH-HHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCcccc
Confidence 345666677777777888888875 5666666 67888888888888888888888888888888888877666 7888
Q ss_pred cCCCCCCEEEecCCCCc--ccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchh
Q 009194 127 GQLKKLEILSLAYSNIN--QLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLV 204 (540)
Q Consensus 127 ~~l~~L~~L~l~~~~~~--~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~ 204 (540)
+.++.|++||+.+|.+. .+|..+-.|+.|+.|+++++. .+-+|.+ ++++++||.|.+..|... +.+.
T Consensus 99 gs~p~levldltynnl~e~~lpgnff~m~tlralyl~dnd-fe~lp~d-vg~lt~lqil~lrdndll---------~lpk 167 (264)
T KOG0617|consen 99 GSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDND-FEILPPD-VGKLTNLQILSLRDNDLL---------SLPK 167 (264)
T ss_pred CCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCC-cccCChh-hhhhcceeEEeeccCchh---------hCcH
Confidence 88888888888887665 677777778888888888877 6777777 788888888887777655 5566
Q ss_pred hccCCCCccEEEeecCCCCCCCccccc
Q 009194 205 ELERLTELTTLEIEVPDAEILPPDFVS 231 (540)
Q Consensus 205 ~l~~l~~L~~L~l~~~~~~~~~~~~~~ 231 (540)
+++.+.+|+.|.|.+|....+|..++.
T Consensus 168 eig~lt~lrelhiqgnrl~vlppel~~ 194 (264)
T KOG0617|consen 168 EIGDLTRLRELHIQGNRLTVLPPELAN 194 (264)
T ss_pred HHHHHHHHHHHhcccceeeecChhhhh
Confidence 777788888888888887777766443
No 15
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.57 E-value=4.5e-17 Score=133.81 Aligned_cols=153 Identities=22% Similarity=0.322 Sum_probs=140.9
Q ss_pred hhcCCCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcE
Q 009194 34 TIQKDPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQT 112 (540)
Q Consensus 34 ~~~~~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~ 112 (540)
.-.+.+.++.++.|.+..+|..+ .+.+|+.|++++|.+ .++|.++ +.+++||.|++.-|.+..+|..++.++.|++
T Consensus 30 f~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqi--e~lp~~i-ssl~klr~lnvgmnrl~~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQI--EELPTSI-SSLPKLRILNVGMNRLNILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchh--hhcChhh-hhchhhhheecchhhhhcCccccCCCchhhh
Confidence 34678899999999998887755 999999999999996 8888887 8999999999999999999999999999999
Q ss_pred EEcCCCccCC---cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCC
Q 009194 113 LCLDWCELAD---IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGF 189 (540)
Q Consensus 113 L~l~~~~~~~---~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 189 (540)
||+.+|++.+ |..|..+..|+.|++++|.+..+|..++++++||.|.+..+. +-++|.+ ++.+++|++|.+.+|.
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdnd-ll~lpke-ig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDND-LLSLPKE-IGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCc-hhhCcHH-HHHHHHHHHHhcccce
Confidence 9999999775 788888999999999999999999999999999999999988 7789988 8999999999999998
Q ss_pred cc
Q 009194 190 SG 191 (540)
Q Consensus 190 ~~ 191 (540)
..
T Consensus 185 l~ 186 (264)
T KOG0617|consen 185 LT 186 (264)
T ss_pred ee
Confidence 76
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.42 E-value=2.6e-12 Score=135.17 Aligned_cols=171 Identities=20% Similarity=0.167 Sum_probs=110.4
Q ss_pred cCCCeEEEccCCCCCCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEc
Q 009194 36 QKDPIAISLPHRDIQELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCL 115 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l 115 (540)
-.+-..++++.+.+..+|.... ++|+.|.+.+|.+ ..+|. ..++|++|++++|+++.+|.. .++|++|++
T Consensus 200 ~~~~~~LdLs~~~LtsLP~~l~-~~L~~L~L~~N~L--t~LP~----lp~~Lk~LdLs~N~LtsLP~l---p~sL~~L~L 269 (788)
T PRK15387 200 NNGNAVLNVGESGLTTLPDCLP-AHITTLVIPDNNL--TSLPA----LPPELRTLEVSGNQLTSLPVL---PPGLLELSI 269 (788)
T ss_pred cCCCcEEEcCCCCCCcCCcchh-cCCCEEEccCCcC--CCCCC----CCCCCcEEEecCCccCcccCc---ccccceeec
Confidence 3445677888887777776432 4688888888775 44553 357788888888888777642 357788888
Q ss_pred CCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCccccc
Q 009194 116 DWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEK 194 (540)
Q Consensus 116 ~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~ 194 (540)
.+|.++. |.. ..+|+.|++++|.++.+|.. .++|++|++++|. +..+|.. ..+|+.|++++|.+..
T Consensus 270 s~N~L~~Lp~l---p~~L~~L~Ls~N~Lt~LP~~---p~~L~~LdLS~N~-L~~Lp~l----p~~L~~L~Ls~N~L~~-- 336 (788)
T PRK15387 270 FSNPLTHLPAL---PSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQ-LASLPAL----PSELCKLWAYNNQLTS-- 336 (788)
T ss_pred cCCchhhhhhc---hhhcCEEECcCCcccccccc---ccccceeECCCCc-cccCCCC----cccccccccccCcccc--
Confidence 8887766 332 24677788888887777752 4678888888876 5555541 2356677777766541
Q ss_pred ccCCCccchhhccCCCCccEEEeecCCCCCCCccccccCccEEEEEe
Q 009194 195 VEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIRI 241 (540)
Q Consensus 195 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~ 241 (540)
++.+ ..+|+.|++++|.+..+|.. ..+|+.|.+..
T Consensus 337 --------LP~l--p~~Lq~LdLS~N~Ls~LP~l--p~~L~~L~Ls~ 371 (788)
T PRK15387 337 --------LPTL--PSGLQELSVSDNQLASLPTL--PSELYKLWAYN 371 (788)
T ss_pred --------cccc--ccccceEecCCCccCCCCCC--Ccccceehhhc
Confidence 1111 13678888888877766642 24555555543
No 17
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.42 E-value=3.1e-12 Score=134.63 Aligned_cols=251 Identities=17% Similarity=0.109 Sum_probs=172.1
Q ss_pred EeEecCcchhhhhhhhhhcCCCeEEEccCCCCCCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCC
Q 009194 18 MFNVPNVADLEKKMEETIQKDPIAISLPHRDIQELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGS 97 (540)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 97 (540)
.+.+.+. .++++|. .++.+++.|++.+|.+..+|.. .++|++|++++|.+ ..+|. ..++|+.|++.+|.+
T Consensus 205 ~LdLs~~-~LtsLP~-~l~~~L~~L~L~~N~Lt~LP~l--p~~Lk~LdLs~N~L--tsLP~----lp~sL~~L~Ls~N~L 274 (788)
T PRK15387 205 VLNVGES-GLTTLPD-CLPAHITTLVIPDNNLTSLPAL--PPELRTLEVSGNQL--TSLPV----LPPGLLELSIFSNPL 274 (788)
T ss_pred EEEcCCC-CCCcCCc-chhcCCCEEEccCCcCCCCCCC--CCCCcEEEecCCcc--CcccC----cccccceeeccCCch
Confidence 4434433 5566665 4677899999999999988874 68999999999986 55653 357899999999999
Q ss_pred CCCCcccccCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhc
Q 009194 98 SSLPSSLGRLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISK 176 (540)
Q Consensus 98 ~~l~~~l~~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~ 176 (540)
..+|... .+|+.|++++|.++. |. ..++|+.|++++|.+..+|.. ..+|+.|++++|. +..+|. +
T Consensus 275 ~~Lp~lp---~~L~~L~Ls~N~Lt~LP~---~p~~L~~LdLS~N~L~~Lp~l---p~~L~~L~Ls~N~-L~~LP~--l-- 340 (788)
T PRK15387 275 THLPALP---SGLCKLWIFGNQLTSLPV---LPPGLQELSVSDNQLASLPAL---PSELCKLWAYNNQ-LTSLPT--L-- 340 (788)
T ss_pred hhhhhch---hhcCEEECcCCccccccc---cccccceeECCCCccccCCCC---cccccccccccCc-cccccc--c--
Confidence 8877633 568899999999887 54 247899999999999988763 3467888898887 666764 1
Q ss_pred CCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccccCccEEEEEecCCCCCCCCcccccc
Q 009194 177 LSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKS 256 (540)
Q Consensus 177 l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 256 (540)
..+|+.|++++|.+... +.+ ..+|+.|++++|.+..+|.. ..+|+.|.++.+.+.... ...
T Consensus 341 p~~Lq~LdLS~N~Ls~L----------P~l--p~~L~~L~Ls~N~L~~LP~l--~~~L~~LdLs~N~Lt~LP-----~l~ 401 (788)
T PRK15387 341 PSGLQELSVSDNQLASL----------PTL--PSELYKLWAYNNRLTSLPAL--PSGLKELIVSGNRLTSLP-----VLP 401 (788)
T ss_pred ccccceEecCCCccCCC----------CCC--CcccceehhhccccccCccc--ccccceEEecCCcccCCC-----Ccc
Confidence 25799999999887621 111 24678888988888777753 257888888766544331 223
Q ss_pred ccccEEEEeccccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeecccc
Q 009194 257 EASRLMMLKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCS 322 (540)
Q Consensus 257 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 322 (540)
++|+.|++++.. ...++ ..+.+|+.|.+.+.. ++.+... +..+++|+.|++++++
T Consensus 402 s~L~~LdLS~N~-LssIP------~l~~~L~~L~Ls~Nq-Lt~LP~s---l~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 402 SELKELMVSGNR-LTSLP------MLPSGLLSLSVYRNQ-LTRLPES---LIHLSSETTVNLEGNP 456 (788)
T ss_pred cCCCEEEccCCc-CCCCC------cchhhhhhhhhccCc-ccccChH---HhhccCCCeEECCCCC
Confidence 578888887722 12221 123455666655432 2222221 3456777777777764
No 18
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.40 E-value=2.9e-13 Score=145.33 Aligned_cols=73 Identities=23% Similarity=0.210 Sum_probs=52.8
Q ss_pred ccccCcccceecccccccccccc--cccCCCCC-CCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEcccccccccc
Q 009194 335 RCEVFPLLEALSLMFLTNLETIC--YSQLREDQ-SFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMII 411 (540)
Q Consensus 335 ~~~~~~~L~~L~l~~c~~l~~~~--~~~~~~~~-~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~ 411 (540)
....+++|+.|.|.+|...+... .+... .. .|+++..+.+.+|..+++..+ ....++|+.|.+.+|+.++++.
T Consensus 712 ~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~-~~~~f~~l~~~~~~~~~~~r~l~~---~~f~~~L~~l~l~~~~~~e~~i 787 (889)
T KOG4658|consen 712 SLGSLGNLEELSILDCGISEIVIEWEESLI-VLLCFPNLSKVSILNCHMLRDLTW---LLFAPHLTSLSLVSCRLLEDII 787 (889)
T ss_pred ccccccCcceEEEEcCCCchhhcccccccc-hhhhHHHHHHHHhhccccccccch---hhccCcccEEEEecccccccCC
Confidence 67889999999999998754321 11110 22 277888888889988887643 3456889999999999988775
No 19
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.37 E-value=3.9e-12 Score=134.68 Aligned_cols=250 Identities=14% Similarity=0.148 Sum_probs=160.7
Q ss_pred hhcCCCeEEEccCCCCCCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEE
Q 009194 34 TIQKDPIAISLPHRDIQELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTL 113 (540)
Q Consensus 34 ~~~~~l~~l~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L 113 (540)
+...+...+.+.++.+..+|..+ .++++.|++++|.+ ..+|..++ .+|++|++++|.+..+|..+. .+|+.|
T Consensus 175 Cl~~~~~~L~L~~~~LtsLP~~I-p~~L~~L~Ls~N~L--tsLP~~l~---~nL~~L~Ls~N~LtsLP~~l~--~~L~~L 246 (754)
T PRK15370 175 CLKNNKTELRLKILGLTTIPACI-PEQITTLILDNNEL--KSLPENLQ---GNIKTLYANSNQLTSIPATLP--DTIQEM 246 (754)
T ss_pred hcccCceEEEeCCCCcCcCCccc-ccCCcEEEecCCCC--CcCChhhc---cCCCEEECCCCccccCChhhh--ccccEE
Confidence 34456778888888887777643 35788888888876 56776553 578888888888888876553 478888
Q ss_pred EcCCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCccc
Q 009194 114 CLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGW 192 (540)
Q Consensus 114 ~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 192 (540)
++++|.+.. |..+. .+|+.|++++|.++.+|..+. .+|++|++++|. +..+|.. + .++|+.|++++|.+..
T Consensus 247 ~Ls~N~L~~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~-Lt~LP~~-l--p~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 247 ELSINRITELPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNS-IRTLPAH-L--PSGITHLNVQSNSLTA 318 (754)
T ss_pred ECcCCccCcCChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCc-cccCccc-c--hhhHHHHHhcCCcccc
Confidence 888888777 55543 478888888888888887654 578888888887 6666654 2 2467888888876651
Q ss_pred ccccCCCccchhhccCCCCccEEEeecCCCCCCCccccccCccEEEEEecCCCCCCCCccccccccccEEEEeccccccc
Q 009194 193 EKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKGIKKVSI 272 (540)
Q Consensus 193 ~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 272 (540)
.+..+ .++|+.|++.+|.+..+|..+ .++|+.|.++.+.+...+ ....+.|+.|+++++. ...
T Consensus 319 ---------LP~~l--~~sL~~L~Ls~N~Lt~LP~~l-~~sL~~L~Ls~N~L~~LP----~~lp~~L~~LdLs~N~-Lt~ 381 (754)
T PRK15370 319 ---------LPETL--PPGLKTLEAGENALTSLPASL-PPELQVLDVSKNQITVLP----ETLPPTITTLDVSRNA-LTN 381 (754)
T ss_pred ---------CCccc--cccceeccccCCccccCChhh-cCcccEEECCCCCCCcCC----hhhcCCcCEEECCCCc-CCC
Confidence 11112 257888888888877776543 267788877665543321 1123578888887732 122
Q ss_pred cccchhhhhhhcccceeeeccccCcccccccCcc-CCCCccccEEeecccc
Q 009194 273 LQENDGTKMLLQRTEDLWLETLEGVQSVVHELDD-GEGFPRLKRLLVTDCS 322 (540)
Q Consensus 273 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~-~~~~~~L~~L~l~~~~ 322 (540)
+ +.. ....|+.|++.+.. +..+...++. ...++.+..+.+.+.+
T Consensus 382 L--P~~---l~~sL~~LdLs~N~-L~~LP~sl~~~~~~~~~l~~L~L~~Np 426 (754)
T PRK15370 382 L--PEN---LPAALQIMQASRNN-LVRLPESLPHFRGEGPQPTRIIVEYNP 426 (754)
T ss_pred C--CHh---HHHHHHHHhhccCC-cccCchhHHHHhhcCCCccEEEeeCCC
Confidence 2 222 22456666666533 2232222111 2334667777777664
No 20
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.35 E-value=6.5e-12 Score=133.00 Aligned_cols=234 Identities=15% Similarity=0.179 Sum_probs=168.7
Q ss_pred hhhhhhhhhhcCCCeEEEccCCCCCCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccc
Q 009194 26 DLEKKMEETIQKDPIAISLPHRDIQELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLG 105 (540)
Q Consensus 26 ~~~~~~~~~~~~~l~~l~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~ 105 (540)
.++.+|. .+++.++.|++++|.+..+|... ..+|++|++++|.+ ..+|..+ ..+|+.|++++|.+..+|..+.
T Consensus 189 ~LtsLP~-~Ip~~L~~L~Ls~N~LtsLP~~l-~~nL~~L~Ls~N~L--tsLP~~l---~~~L~~L~Ls~N~L~~LP~~l~ 261 (754)
T PRK15370 189 GLTTIPA-CIPEQITTLILDNNELKSLPENL-QGNIKTLYANSNQL--TSIPATL---PDTIQEMELSINRITELPERLP 261 (754)
T ss_pred CcCcCCc-ccccCCcEEEecCCCCCcCChhh-ccCCCEEECCCCcc--ccCChhh---hccccEEECcCCccCcCChhHh
Confidence 4555554 46788999999999999888754 36899999999986 5677654 3579999999999999987664
Q ss_pred cCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEE
Q 009194 106 RLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELY 184 (540)
Q Consensus 106 ~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~ 184 (540)
.+|++|++++|.++. |..+. .+|++|++++|.++.+|..+. .+|++|++++|. +..+|.. + .++|+.|+
T Consensus 262 --s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~-Lt~LP~~-l--~~sL~~L~ 331 (754)
T PRK15370 262 --SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNS-LTALPET-L--PPGLKTLE 331 (754)
T ss_pred --CCCCEEECcCCccCccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCc-cccCCcc-c--cccceecc
Confidence 589999999999887 66554 589999999999998887553 478999999987 6667754 2 36899999
Q ss_pred ccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccccCccEEEEEecCCCCCCCCccccccccccEEEE
Q 009194 185 MGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVSVELQRYKIRIGDGPEDEFDPLLVKSEASRLMML 264 (540)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 264 (540)
+++|.+.. .+..+ .++|+.|++++|.+..+|..+ .++|+.|+++.+....+.. .....|+.|++
T Consensus 332 Ls~N~Lt~---------LP~~l--~~sL~~L~Ls~N~L~~LP~~l-p~~L~~LdLs~N~Lt~LP~----~l~~sL~~LdL 395 (754)
T PRK15370 332 AGENALTS---------LPASL--PPELQVLDVSKNQITVLPETL-PPTITTLDVSRNALTNLPE----NLPAALQIMQA 395 (754)
T ss_pred ccCCcccc---------CChhh--cCcccEEECCCCCCCcCChhh-cCCcCEEECCCCcCCCCCH----hHHHHHHHHhh
Confidence 99887651 22222 268999999999988777643 3689999987766554421 12246888888
Q ss_pred eccccccccccchhhhhh---hcccceeeecccc
Q 009194 265 KGIKKVSILQENDGTKML---LQRTEDLWLETLE 295 (540)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~---~~~L~~L~l~~~~ 295 (540)
+++. ...+ +..+... .+++..+.+.+.+
T Consensus 396 s~N~-L~~L--P~sl~~~~~~~~~l~~L~L~~Np 426 (754)
T PRK15370 396 SRNN-LVRL--PESLPHFRGEGPQPTRIIVEYNP 426 (754)
T ss_pred ccCC-cccC--chhHHHHhhcCCCccEEEeeCCC
Confidence 8732 1222 2222222 3556667665543
No 21
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=99.32 E-value=4.5e-14 Score=132.24 Aligned_cols=170 Identities=14% Similarity=0.196 Sum_probs=106.6
Q ss_pred CCCccccEEeeccccCceeeeccccccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccCh
Q 009194 308 EGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSF 387 (540)
Q Consensus 308 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~ 387 (540)
..+..|+.|..++|..++..+.. .-....++|+.+.+..|..+++.....+ ..+++.|+.+.+.+|..+++....
T Consensus 291 ~~c~~lq~l~~s~~t~~~d~~l~---aLg~~~~~L~~l~l~~c~~fsd~~ft~l--~rn~~~Le~l~~e~~~~~~d~tL~ 365 (483)
T KOG4341|consen 291 CGCHALQVLCYSSCTDITDEVLW---ALGQHCHNLQVLELSGCQQFSDRGFTML--GRNCPHLERLDLEECGLITDGTLA 365 (483)
T ss_pred hhhhHhhhhcccCCCCCchHHHH---HHhcCCCceEEEeccccchhhhhhhhhh--hcCChhhhhhcccccceehhhhHh
Confidence 44667777777777654433221 1334557777777777777777665554 456777777777777766665344
Q ss_pred HHHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCccCCCCccEEEEccCCCcccccchhhhhhc
Q 009194 388 SMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSL 467 (540)
Q Consensus 388 ~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l 467 (540)
....+++.|+.+.++.|..+++.+...+ .....+...|+.+.+.+||.+++- ..+....+
T Consensus 366 sls~~C~~lr~lslshce~itD~gi~~l-------------------~~~~c~~~~l~~lEL~n~p~i~d~-~Le~l~~c 425 (483)
T KOG4341|consen 366 SLSRNCPRLRVLSLSHCELITDEGIRHL-------------------SSSSCSLEGLEVLELDNCPLITDA-TLEHLSIC 425 (483)
T ss_pred hhccCCchhccCChhhhhhhhhhhhhhh-------------------hhccccccccceeeecCCCCchHH-HHHHHhhC
Confidence 4456677788888887777776521110 111223567778888888888776 34556777
Q ss_pred CCCcEEEEecccccceeccccccCCCCccccccccceeecc
Q 009194 468 GQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLH 508 (540)
Q Consensus 468 ~~L~~L~i~~C~~L~~~~~~~~~~~~~~~~~~~~L~~L~l~ 508 (540)
++||.+++.+|...+.-..+.. ..++|.+++..+.
T Consensus 426 ~~Leri~l~~~q~vtk~~i~~~------~~~lp~i~v~a~~ 460 (483)
T KOG4341|consen 426 RNLERIELIDCQDVTKEAISRF------ATHLPNIKVHAYF 460 (483)
T ss_pred cccceeeeechhhhhhhhhHHH------HhhCccceehhhc
Confidence 8888888888877666433221 2256666665544
No 22
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=99.31 E-value=4.5e-14 Score=132.26 Aligned_cols=267 Identities=17% Similarity=0.117 Sum_probs=153.7
Q ss_pred ccccccccEEEEeccccccccccchhhhhhhcccceeeeccccCcccccccCccCCCCccccEEeeccccCceeeecccc
Q 009194 253 LVKSEASRLMMLKGIKKVSILQENDGTKMLLQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDCSEILHIVGSVR 332 (540)
Q Consensus 253 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 332 (540)
...+|++++|.+.+|...+... .......+++|+++.+..|..+++...+.. ..++++|+++.+++|+.++.-. .
T Consensus 160 ~~~CpnIehL~l~gc~~iTd~s-~~sla~~C~~l~~l~L~~c~~iT~~~Lk~l-a~gC~kL~~lNlSwc~qi~~~g---v 234 (483)
T KOG4341|consen 160 ASNCPNIEHLALYGCKKITDSS-LLSLARYCRKLRHLNLHSCSSITDVSLKYL-AEGCRKLKYLNLSWCPQISGNG---V 234 (483)
T ss_pred hhhCCchhhhhhhcceeccHHH-HHHHHHhcchhhhhhhcccchhHHHHHHHH-HHhhhhHHHhhhccCchhhcCc---c
Confidence 3466777777777755444333 344455668888888888777776644322 5678888888888888666411 1
Q ss_pred ccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccccc
Q 009194 333 RVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIG 412 (540)
Q Consensus 333 ~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~ 412 (540)
.....++..++.+..++|..++.-..... ...++-+.++++..|..+++.........+..|+.|+.++|.++++...
T Consensus 235 ~~~~rG~~~l~~~~~kGC~e~~le~l~~~--~~~~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l 312 (483)
T KOG4341|consen 235 QALQRGCKELEKLSLKGCLELELEALLKA--AAYCLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVL 312 (483)
T ss_pred hHHhccchhhhhhhhcccccccHHHHHHH--hccChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHH
Confidence 11233445566666666665544332221 3344555555555666666554333444555666666666665554443
Q ss_pred cCCC-CCCCccceeeecccCCC----CCCCccCCCCccEEEEccCCCcccccchhhhhhcCCCcEEEEecccccceeccc
Q 009194 413 PDME-KPPTTQGFIEINAEDDP----VHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNT 487 (540)
Q Consensus 413 ~~~~-~~~~l~~l~~i~~~~~~----~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~~L~~~~~~ 487 (540)
...+ ..+.|+.+ .+..|... ......+.+.|+.+++.+|..+.+-.......+++.|+.+.+++|..+++-
T Consensus 313 ~aLg~~~~~L~~l-~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~--- 388 (483)
T KOG4341|consen 313 WALGQHCHNLQVL-ELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDE--- 388 (483)
T ss_pred HHHhcCCCceEEE-eccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhh---
Confidence 2222 11223322 33333322 122233677888888888877666533444567888888888888776663
Q ss_pred cccCC-CCccccccccceeecccCCCCC--------CCCCCCceEeecCCCcc
Q 009194 488 TTLGG-RDEFKVFPKLHYLSLHWLPKLS--------SFASPEDVIHTEMQPQS 531 (540)
Q Consensus 488 ~~~~~-~~~~~~~~~L~~L~l~~~p~L~--------~~~~l~~l~i~~c~~~~ 531 (540)
+..+ .........|+.+.+.+||.++ ..+.|+.+.+.+|+.++
T Consensus 389 -gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q~vt 440 (483)
T KOG4341|consen 389 -GIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQDVT 440 (483)
T ss_pred -hhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechhhhh
Confidence 2221 1112345668888888888744 44778888888887643
No 23
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.21 E-value=1.5e-12 Score=121.18 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=149.5
Q ss_pred ecCcchhhhhhhhhhcCCCeEEEccCCCCCCCCCcC--CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCC-CCC
Q 009194 21 VPNVADLEKKMEETIQKDPIAISLPHRDIQELPERL--QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPG-IGS 97 (540)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~l~~~~--~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~-~~~ 97 (540)
-..+.++.++|. +.++....+.+..|.+..+|+-. .+++||.|+++.|.+ ..+..+.|.+++.|..|-+.+ |.|
T Consensus 52 dCr~~GL~eVP~-~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~I--s~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 52 DCRGKGLTEVPA-NLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNI--SFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred EccCCCcccCcc-cCCCcceEEEeccCCcccCChhhccchhhhceecccccch--hhcChHhhhhhHhhhHHHhhcCCch
Confidence 344566667664 67888889999988888888733 888899999998886 666667778888888887777 778
Q ss_pred CCCCc-ccccCCCCcEEEcCCCccCC--cccccCCCCCCEEEecCCCCcccch-hcCCCCCCCEEECCCCcccc------
Q 009194 98 SSLPS-SLGRLINLQTLCLDWCELAD--IAAIGQLKKLEILSLAYSNINQLPV-EIGQLTRLQLLDLSNCWWLE------ 167 (540)
Q Consensus 98 ~~l~~-~l~~l~~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~~lp~-~~~~l~~L~~L~l~~~~~~~------ 167 (540)
+.+|. .|+++..|+-|.+.-|.+.- .+.+..+++|..|.+..|.+..++. .+..+.+++++.+..+.++.
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 88875 56788888888888777664 4778888888888888888877776 37777777777765543110
Q ss_pred ------ccchhhhhcCCccceEEccCCCccccccc--------------C----CCccchhhccCCCCccEEEeecCCCC
Q 009194 168 ------VIAPNVISKLSQLEELYMGNGFSGWEKVE--------------G----GSNASLVELERLTELTTLEIEVPDAE 223 (540)
Q Consensus 168 ------~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--------------~----~~~~~~~~l~~l~~L~~L~l~~~~~~ 223 (540)
..|.+ .+..+...-..+.+..+...... . ...+-...++++++|++|++++|.+.
T Consensus 209 la~~~a~~~ie-tsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~ 287 (498)
T KOG4237|consen 209 LADDLAMNPIE-TSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT 287 (498)
T ss_pred hhhHHhhchhh-cccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc
Confidence 11111 11111111111111111000000 0 01112233677888888888888777
Q ss_pred CCCccccc--cCccEEEEEecCCCCCCCCccccccccccEEEEec
Q 009194 224 ILPPDFVS--VELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKG 266 (540)
Q Consensus 224 ~~~~~~~~--~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~ 266 (540)
.+...... .+++.|.+..+.+... .......+..|+.|++.+
T Consensus 288 ~i~~~aFe~~a~l~eL~L~~N~l~~v-~~~~f~~ls~L~tL~L~~ 331 (498)
T KOG4237|consen 288 RIEDGAFEGAAELQELYLTRNKLEFV-SSGMFQGLSGLKTLSLYD 331 (498)
T ss_pred hhhhhhhcchhhhhhhhcCcchHHHH-HHHhhhccccceeeeecC
Confidence 66655333 6667666644332221 111234566777777766
No 24
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.16 E-value=8.8e-13 Score=122.76 Aligned_cols=103 Identities=24% Similarity=0.236 Sum_probs=55.4
Q ss_pred CcEEEcCCCCCCCCCc-ccccCCCCcEEEcCCCccCC--cccccCCCCCCEEEecC-CCCcccchh-cCCCCCCCEEECC
Q 009194 87 LKVLQFPGIGSSSLPS-SLGRLINLQTLCLDWCELAD--IAAIGQLKKLEILSLAY-SNINQLPVE-IGQLTRLQLLDLS 161 (540)
Q Consensus 87 L~~L~l~~~~~~~l~~-~l~~l~~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~-~~~~~lp~~-~~~l~~L~~L~l~ 161 (540)
-..+.+..|+|+.+|+ +|+.+++||.|++++|.|+. |..|..++.|-.|-+.+ |+|+.+|.. ++++..|+.|.+.
T Consensus 69 tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllN 148 (498)
T KOG4237|consen 69 TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLN 148 (498)
T ss_pred ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcC
Confidence 3345555555555543 44555555555555555554 45555555555444444 455555554 5555555555555
Q ss_pred CCccccccchhhhhcCCccceEEccCCCc
Q 009194 162 NCWWLEVIAPNVISKLSQLEELYMGNGFS 190 (540)
Q Consensus 162 ~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 190 (540)
-|. +..++.+++..+++|..|.+..|.+
T Consensus 149 an~-i~Cir~~al~dL~~l~lLslyDn~~ 176 (498)
T KOG4237|consen 149 ANH-INCIRQDALRDLPSLSLLSLYDNKI 176 (498)
T ss_pred hhh-hcchhHHHHHHhhhcchhcccchhh
Confidence 554 4555555555555555555554443
No 25
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.14 E-value=1.5e-11 Score=120.33 Aligned_cols=160 Identities=21% Similarity=0.139 Sum_probs=72.2
Q ss_pred CCCCccEEEcccCCCCCccc---cHHHHhcCccCcEEEcCCCCCCC-------CCcccccCCCCcEEEcCCCccCC--cc
Q 009194 57 QCPNLQLFLLYTEGNGPMQV---SDHFFEGMEGLKVLQFPGIGSSS-------LPSSLGRLINLQTLCLDWCELAD--IA 124 (540)
Q Consensus 57 ~~~~L~~L~l~~~~~~~~~~---~~~~~~~l~~L~~L~l~~~~~~~-------l~~~l~~l~~L~~L~l~~~~~~~--~~ 124 (540)
.++.|+.+.+.++.. ...- ....+...+.++.++++++.+.. ++..+..+++|++|++++|.+.. +.
T Consensus 21 ~l~~L~~l~l~~~~l-~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 99 (319)
T cd00116 21 KLLCLQVLRLEGNTL-GEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCG 99 (319)
T ss_pred HHhhccEEeecCCCC-cHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHH
Confidence 344466666666554 1111 11222345556666666555431 22334445566666666665542 23
Q ss_pred cccCCC---CCCEEEecCCCCc-----ccchhcCCC-CCCCEEECCCCcccc----ccchhhhhcCCccceEEccCCCcc
Q 009194 125 AIGQLK---KLEILSLAYSNIN-----QLPVEIGQL-TRLQLLDLSNCWWLE----VIAPNVISKLSQLEELYMGNGFSG 191 (540)
Q Consensus 125 ~i~~l~---~L~~L~l~~~~~~-----~lp~~~~~l-~~L~~L~l~~~~~~~----~~~~~~l~~l~~L~~L~l~~~~~~ 191 (540)
.+..+. +|++|++++|.+. .+...+..+ ++|+.|++++|.... .++.. +..+++|++|++++|.+.
T Consensus 100 ~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~-~~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 100 VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA-LRANRDLKELNLANNGIG 178 (319)
T ss_pred HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH-HHhCCCcCEEECcCCCCc
Confidence 333332 2666666665444 122233444 556666666555221 11111 334455556665555443
Q ss_pred cccccCCCccchhhccCCCCccEEEeecCCC
Q 009194 192 WEKVEGGSNASLVELERLTELTTLEIEVPDA 222 (540)
Q Consensus 192 ~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 222 (540)
.. ........+..+++|+.|++++|.+
T Consensus 179 ~~----~~~~l~~~l~~~~~L~~L~L~~n~i 205 (319)
T cd00116 179 DA----GIRALAEGLKANCNLEVLDLNNNGL 205 (319)
T ss_pred hH----HHHHHHHHHHhCCCCCEEeccCCcc
Confidence 10 0011222333444555555555543
No 26
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.12 E-value=3.2e-12 Score=124.41 Aligned_cols=192 Identities=23% Similarity=0.309 Sum_probs=160.8
Q ss_pred cchhhhhhhhh---hcCCCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCC
Q 009194 24 VADLEKKMEET---IQKDPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSS 99 (540)
Q Consensus 24 ~~~~~~~~~~~---~~~~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 99 (540)
+...+.+|... .......++++.|.+..+|.-. .+..|..+.+..|.+ ..++..+ .++..|.+++++.|+++.
T Consensus 59 ~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~--r~ip~~i-~~L~~lt~l~ls~NqlS~ 135 (722)
T KOG0532|consen 59 GRRLKEFPRGAASYDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCI--RTIPEAI-CNLEALTFLDLSSNQLSH 135 (722)
T ss_pred cchhhcCCCccccccccchhhhhccccccccCchHHHHHHHHHHHHHHhccc--eecchhh-hhhhHHHHhhhccchhhc
Confidence 33444444432 2344567888889988888755 778899999999886 6677666 789999999999999999
Q ss_pred CCcccccCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCC
Q 009194 100 LPSSLGRLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLS 178 (540)
Q Consensus 100 l~~~l~~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~ 178 (540)
+|..+..|+ |+.|-+++|+++. |..++.+.+|..|+.+.|.+.++|..++.+.+|+.|.+..|. ...+|.+ +..|+
T Consensus 136 lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~-l~~lp~E-l~~Lp 212 (722)
T KOG0532|consen 136 LPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNH-LEDLPEE-LCSLP 212 (722)
T ss_pred CChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhh-hhhCCHH-HhCCc
Confidence 998888887 9999999999887 889999999999999999999999999999999999999988 7888888 66554
Q ss_pred ccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCccccc
Q 009194 179 QLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPDFVS 231 (540)
Q Consensus 179 ~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~ 231 (540)
|..|+++.|.+. ..+..+.+|..|++|.+.+|++..-|..+..
T Consensus 213 -Li~lDfScNkis---------~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~ 255 (722)
T KOG0532|consen 213 -LIRLDFSCNKIS---------YLPVDFRKMRHLQVLQLENNPLQSPPAQICE 255 (722)
T ss_pred -eeeeecccCcee---------ecchhhhhhhhheeeeeccCCCCCChHHHHh
Confidence 899999999887 6678899999999999999999888877655
No 27
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.08 E-value=9.5e-11 Score=101.18 Aligned_cols=102 Identities=24% Similarity=0.303 Sum_probs=24.2
Q ss_pred CCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCccc-ccCCCCcEEEc
Q 009194 38 DPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSL-GRLINLQTLCL 115 (540)
Q Consensus 38 ~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l-~~l~~L~~L~l 115 (540)
+.|.|+++++.+..+.... .+.+|+.|++++|.+ .++.. +..+++|++|++++|.++.+...+ ..+++|++|++
T Consensus 20 ~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I--~~l~~--l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTIENLGATLDKLEVLDLSNNQI--TKLEG--LPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ----------------S--TT-TT--EEE-TTS----S--TT------TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccccchhhhhcCCCEEECCCCCC--ccccC--ccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 3455555555554444433 344555555555554 22222 244555555555555555444333 23555555555
Q ss_pred CCCccCC---cccccCCCCCCEEEecCCCCc
Q 009194 116 DWCELAD---IAAIGQLKKLEILSLAYSNIN 143 (540)
Q Consensus 116 ~~~~~~~---~~~i~~l~~L~~L~l~~~~~~ 143 (540)
++|.+.+ ...+..+++|++|++.+|.+.
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 5555443 234444455555555555443
No 28
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1.9e-10 Score=99.33 Aligned_cols=126 Identities=25% Similarity=0.288 Sum_probs=30.9
Q ss_pred ccCcEEEcCCCCCCCCCcccc-cCCCCcEEEcCCCccCCcccccCCCCCCEEEecCCCCcccchhc-CCCCCCCEEECCC
Q 009194 85 EGLKVLQFPGIGSSSLPSSLG-RLINLQTLCLDWCELADIAAIGQLKKLEILSLAYSNINQLPVEI-GQLTRLQLLDLSN 162 (540)
Q Consensus 85 ~~L~~L~l~~~~~~~l~~~l~-~l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~l~~~~~~~lp~~~-~~l~~L~~L~l~~ 162 (540)
..++.|+++++.++.+.. ++ .+.+|+.|++++|.++..+.+..+++|+.|++++|.++.++..+ ..+++|++|++++
T Consensus 19 ~~~~~L~L~~n~I~~Ie~-L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~ 97 (175)
T PF14580_consen 19 VKLRELNLRGNQISTIEN-LGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSN 97 (175)
T ss_dssp -----------------S---TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-TT
T ss_pred cccccccccccccccccc-hhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcC
Confidence 344444444444443321 22 34445555555555544444445555555555555555443333 2345555555555
Q ss_pred Cccccccch-hhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEe
Q 009194 163 CWWLEVIAP-NVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEI 217 (540)
Q Consensus 163 ~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l 217 (540)
|. +.++.. ..++.+++|+.|++.+|++.. ........+..+|+|+.||-
T Consensus 98 N~-I~~l~~l~~L~~l~~L~~L~L~~NPv~~-----~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 98 NK-ISDLNELEPLSSLPKLRVLSLEGNPVCE-----KKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp S----SCCCCGGGGG-TT--EEE-TT-GGGG-----STTHHHHHHHH-TT-SEETT
T ss_pred Cc-CCChHHhHHHHcCCCcceeeccCCcccc-----hhhHHHHHHHHcChhheeCC
Confidence 44 222110 113445555555555554431 11123333444555555544
No 29
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.98 E-value=4.6e-11 Score=116.54 Aligned_cols=189 Identities=21% Similarity=0.263 Sum_probs=160.8
Q ss_pred EEEccCCCCCCCCCc---CCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCC
Q 009194 41 AISLPHRDIQELPER---LQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDW 117 (540)
Q Consensus 41 ~l~l~~~~~~~l~~~---~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~ 117 (540)
++.|++...+.+|.- ..+......+++.|.+ ..+|..+ ..|..|..+.++.|.+..+|..+.++..|.+++++.
T Consensus 54 ~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~--~elp~~~-~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRF--SELPEEA-CAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSS 130 (722)
T ss_pred ccccccchhhcCCCccccccccchhhhhcccccc--ccCchHH-HHHHHHHHHHHHhccceecchhhhhhhHHHHhhhcc
Confidence 556666555555542 2445555678888887 7788776 788999999999999999999999999999999999
Q ss_pred CccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCccccccc
Q 009194 118 CELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVE 196 (540)
Q Consensus 118 ~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~ 196 (540)
|.++. |..++.|+ |++|.+++|+++.+|..++.+..|.+||.+.|. +..+|.+ ++.+.+|+.|.+..|.+.
T Consensus 131 NqlS~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~ne-i~slpsq-l~~l~slr~l~vrRn~l~----- 202 (722)
T KOG0532|consen 131 NQLSHLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNE-IQSLPSQ-LGYLTSLRDLNVRRNHLE----- 202 (722)
T ss_pred chhhcCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhh-hhhchHH-hhhHHHHHHHHHhhhhhh-----
Confidence 99998 88888887 999999999999999999999999999999998 8889888 899999999999888776
Q ss_pred CCCccchhhccCCCCccEEEeecCCCCCCCccccc-cCccEEEEEecCCC
Q 009194 197 GGSNASLVELERLTELTTLEIEVPDAEILPPDFVS-VELQRYKIRIGDGP 245 (540)
Q Consensus 197 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~L~~L~l~~~~~~ 245 (540)
..++++..+ .|..||++.|++..+|..+.. ..|+.|.+..+...
T Consensus 203 ----~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 203 ----DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred ----hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCC
Confidence 567778755 589999999999999999877 88999988766543
No 30
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.97 E-value=7.3e-10 Score=108.38 Aligned_cols=205 Identities=21% Similarity=0.190 Sum_probs=134.9
Q ss_pred cCCCeEEEccCCCCCCCC-------C-cCCCCCccEEEcccCCCCCccccHHHHhcCcc---CcEEEcCCCCCCC-----
Q 009194 36 QKDPIAISLPHRDIQELP-------E-RLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEG---LKVLQFPGIGSSS----- 99 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~l~-------~-~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~---L~~L~l~~~~~~~----- 99 (540)
.+++++++++++.+...+ . +..+++|+.|++++|.+ .... ...+..+.. |++|++++|.+..
T Consensus 50 ~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~~~-~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~ 127 (319)
T cd00116 50 QPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNAL-GPDG-CGVLESLLRSSSLQELKLNNNGLGDRGLRL 127 (319)
T ss_pred CCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCC-ChhH-HHHHHHHhccCcccEEEeeCCccchHHHHH
Confidence 455889999887765211 1 22678999999999887 3222 223344444 9999999998762
Q ss_pred CCcccccC-CCCcEEEcCCCccCC------cccccCCCCCCEEEecCCCCc-----ccchhcCCCCCCCEEECCCCcccc
Q 009194 100 LPSSLGRL-INLQTLCLDWCELAD------IAAIGQLKKLEILSLAYSNIN-----QLPVEIGQLTRLQLLDLSNCWWLE 167 (540)
Q Consensus 100 l~~~l~~l-~~L~~L~l~~~~~~~------~~~i~~l~~L~~L~l~~~~~~-----~lp~~~~~l~~L~~L~l~~~~~~~ 167 (540)
+...+..+ ++|+.|++++|.++. +..+..+.+|++|++++|.+. .++..+..+++|++|++++|....
T Consensus 128 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 207 (319)
T cd00116 128 LAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTD 207 (319)
T ss_pred HHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccCh
Confidence 33455666 889999999999773 245667789999999999776 344456667899999999887321
Q ss_pred ----ccchhhhhcCCccceEEccCCCcccccccCCCccchhhc-cCCCCccEEEeecCCCCCC-----Cccccc-cCccE
Q 009194 168 ----VIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVEL-ERLTELTTLEIEVPDAEIL-----PPDFVS-VELQR 236 (540)
Q Consensus 168 ----~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l-~~l~~L~~L~l~~~~~~~~-----~~~~~~-~~L~~ 236 (540)
.++.. +..+++|++|++++|.+..... ......+ ...+.|+.|++++|.+... ...... ++|+.
T Consensus 208 ~~~~~l~~~-~~~~~~L~~L~ls~n~l~~~~~----~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~ 282 (319)
T cd00116 208 EGASALAET-LASLKSLEVLNLGDNNLTDAGA----AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLE 282 (319)
T ss_pred HHHHHHHHH-hcccCCCCEEecCCCcCchHHH----HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccE
Confidence 12222 5677889999999987652110 0111111 1247899999999886421 122222 67888
Q ss_pred EEEEecCCCCC
Q 009194 237 YKIRIGDGPED 247 (540)
Q Consensus 237 L~l~~~~~~~~ 247 (540)
+.++.+.+.+.
T Consensus 283 l~l~~N~l~~~ 293 (319)
T cd00116 283 LDLRGNKFGEE 293 (319)
T ss_pred EECCCCCCcHH
Confidence 88876665544
No 31
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=2.8e-10 Score=107.81 Aligned_cols=187 Identities=21% Similarity=0.127 Sum_probs=112.2
Q ss_pred hhcCCCeEEEccCCCCCCCCC---cCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCccc--ccCC
Q 009194 34 TIQKDPIAISLPHRDIQELPE---RLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSL--GRLI 108 (540)
Q Consensus 34 ~~~~~l~~l~l~~~~~~~l~~---~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l--~~l~ 108 (540)
.-.+++|.+++.++.++..+. ...|+++|.|+++.|-+........+...+++|+.|+++.|.+....++. ..++
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 346678888888777765552 23788888888888776444445566677888888888887764322211 2567
Q ss_pred CCcEEEcCCCccCC--c-ccccCCCCCCEEEecCCC-CcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEE
Q 009194 109 NLQTLCLDWCELAD--I-AAIGQLKKLEILSLAYSN-INQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELY 184 (540)
Q Consensus 109 ~L~~L~l~~~~~~~--~-~~i~~l~~L~~L~l~~~~-~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~ 184 (540)
+|+.|.++.|.++. . .....+++|+.|++.+|. +..-......+..|+.|++++|..++.--...++.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 77888888887763 3 455567778888887773 3222222344667777777777644332122266777777777
Q ss_pred ccCCCcccccccCCCccchhhccCCCCccEEEeecCCC
Q 009194 185 MGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDA 222 (540)
Q Consensus 185 l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 222 (540)
++.+.+.... ..+..+.......++|+.|++..|++
T Consensus 278 ls~tgi~si~--~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 278 LSSTGIASIA--EPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred ccccCcchhc--CCCccchhhhcccccceeeecccCcc
Confidence 7766554110 11112222234455555555555554
No 32
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.86 E-value=4.2e-10 Score=101.43 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=137.4
Q ss_pred hhcCCCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCc--cccH-------------------HHHhcCccCcEEE
Q 009194 34 TIQKDPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPM--QVSD-------------------HFFEGMEGLKVLQ 91 (540)
Q Consensus 34 ~~~~~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~--~~~~-------------------~~~~~l~~L~~L~ 91 (540)
++.+++..+.++.++-+.+.... .-|.|.++.+........ -+|. .....+..|..++
T Consensus 211 ~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelD 290 (490)
T KOG1259|consen 211 NAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVPSLLPETILADPSGSEPSTSNGSALVSADTWQELTELD 290 (490)
T ss_pred HHhhhhheeeeeccchhheeceeecCchhheeeeecccccccccccchhhhcCccCCCCCccCCceEEecchHhhhhhcc
Confidence 45666777777776655554443 345666666554332000 0000 0113457899999
Q ss_pred cCCCCCCCCCcccccCCCCcEEEcCCCccCCcccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccch
Q 009194 92 FPGIGSSSLPSSLGRLINLQTLCLDWCELADIAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAP 171 (540)
Q Consensus 92 l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~ 171 (540)
+++|.|+.+.++..-.|.+|.|++++|.+.....+..+++|+.||+++|.++++...-.++.+.+.|.+.+|. +..+..
T Consensus 291 LS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~-iE~LSG 369 (490)
T KOG1259|consen 291 LSGNLITQIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNK-IETLSG 369 (490)
T ss_pred ccccchhhhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhh-Hhhhhh
Confidence 9999999998888889999999999999888777899999999999999888876666788999999999987 777765
Q ss_pred hhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCcc
Q 009194 172 NVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPD 228 (540)
Q Consensus 172 ~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~ 228 (540)
++++-+|..|++++|.+... .-...+++++-|+.+.+.+|++..++..
T Consensus 370 --L~KLYSLvnLDl~~N~Ie~l-------deV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 370 --LRKLYSLVNLDLSSNQIEEL-------DEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred --hHhhhhheeccccccchhhH-------HHhcccccccHHHHHhhcCCCccccchH
Confidence 88999999999999887622 2245678899999999999987766643
No 33
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.78 E-value=6.9e-10 Score=100.03 Aligned_cols=125 Identities=22% Similarity=0.267 Sum_probs=73.2
Q ss_pred cCCCeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEE
Q 009194 36 QKDPIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLC 114 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~ 114 (540)
++.+..+++++|.+..+.++. -.|++|.|+++.|.+ ..+- . +..+++|..|++++|.++.+..+=.++.|+++|.
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i--~~v~-n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRI--RTVQ-N-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLK 358 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccce--eeeh-h-hhhcccceEeecccchhHhhhhhHhhhcCEeeee
Confidence 455666666666666665555 346666666666654 2221 2 3556666666666666655544445566666666
Q ss_pred cCCCccCCcccccCCCCCCEEEecCCCCcccch--hcCCCCCCCEEECCCCc
Q 009194 115 LDWCELADIAAIGQLKKLEILSLAYSNINQLPV--EIGQLTRLQLLDLSNCW 164 (540)
Q Consensus 115 l~~~~~~~~~~i~~l~~L~~L~l~~~~~~~lp~--~~~~l~~L~~L~l~~~~ 164 (540)
+.+|.+.....++++++|.+||+++|++..+.. +|++++.|+++.+.+|.
T Consensus 359 La~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 359 LAQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred hhhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 666666656666666666666666666654332 35666666666655554
No 34
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=1.9e-09 Score=102.30 Aligned_cols=177 Identities=14% Similarity=0.066 Sum_probs=107.2
Q ss_pred hcCccCcEEEcCCCCCCCCC--cccccCCCCcEEEcCCCccCC--c--ccccCCCCCCEEEecCCCCcccchh--cCCCC
Q 009194 82 EGMEGLKVLQFPGIGSSSLP--SSLGRLINLQTLCLDWCELAD--I--AAIGQLKKLEILSLAYSNINQLPVE--IGQLT 153 (540)
Q Consensus 82 ~~l~~L~~L~l~~~~~~~l~--~~l~~l~~L~~L~l~~~~~~~--~--~~i~~l~~L~~L~l~~~~~~~lp~~--~~~l~ 153 (540)
++++.|+...++++.+...+ .....|++++.|++++|-+.. + .....|++|+.|+++.|.+...-.+ -..+.
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 56777888888888776555 345678888888888887664 2 5566788888888888766532222 23567
Q ss_pred CCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCcc--ccc
Q 009194 154 RLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPD--FVS 231 (540)
Q Consensus 154 ~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--~~~ 231 (540)
+|+.|.+++|.....-...++..+|+|+.|.+..|.... .......-++.|+.|+|++|.+-.++.. .+.
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~--------~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~ 269 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIIL--------IKATSTKILQTLQELDLSNNNLIDFDQGYKVGT 269 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccc--------eecchhhhhhHHhhccccCCccccccccccccc
Confidence 788888888875444334445667888888887773210 0111223355677888888775544422 122
Q ss_pred -cCccEEEEEecCCCCCCCCc-----cccccccccEEEEec
Q 009194 232 -VELQRYKIRIGDGPEDEFDP-----LLVKSEASRLMMLKG 266 (540)
Q Consensus 232 -~~L~~L~l~~~~~~~~~~~~-----~~~~~~~L~~L~l~~ 266 (540)
+.|+.|+++.+++++....+ ....+++|+.|.+..
T Consensus 270 l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~ 310 (505)
T KOG3207|consen 270 LPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISE 310 (505)
T ss_pred ccchhhhhccccCcchhcCCCccchhhhcccccceeeeccc
Confidence 66777777666554442221 133445555555544
No 35
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.76 E-value=9.4e-09 Score=103.64 Aligned_cols=186 Identities=26% Similarity=0.322 Sum_probs=128.3
Q ss_pred EEccCCCC-CCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCc-cCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCc
Q 009194 42 ISLPHRDI-QELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGME-GLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCE 119 (540)
Q Consensus 42 l~l~~~~~-~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~-~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~ 119 (540)
+....+.+ ...........++.|.+.++.+ .+++... .... +|+.|+++++.+..+|..++.+++|+.|+++.|.
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i--~~i~~~~-~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~ 174 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNI--TDIPPLI-GLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFND 174 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCccc--ccCcccc-ccchhhcccccccccchhhhhhhhhccccccccccCCch
Confidence 44555544 3333333556788888888775 5555543 3443 7888888888888887777888888888888888
Q ss_pred cCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCC
Q 009194 120 LAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGG 198 (540)
Q Consensus 120 ~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 198 (540)
+.+ +...+.+++|+.|+++++.+..+|..+....+|+++.++++... ..+.. +.++.++..+.+..+...
T Consensus 175 l~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~-~~~~~~l~~l~l~~n~~~------- 245 (394)
T COG4886 175 LSDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSS-LSNLKNLSGLELSNNKLE------- 245 (394)
T ss_pred hhhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchh-hhhcccccccccCCceee-------
Confidence 877 55555888888888888888888877777777888888887523 33333 677777777776666554
Q ss_pred CccchhhccCCCCccEEEeecCCCCCCCccccc-cCccEEEEEec
Q 009194 199 SNASLVELERLTELTTLEIEVPDAEILPPDFVS-VELQRYKIRIG 242 (540)
Q Consensus 199 ~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~-~~L~~L~l~~~ 242 (540)
..+..++.+++++.|+++.|....++. +.. .+++.+.++..
T Consensus 246 --~~~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n 287 (394)
T COG4886 246 --DLPESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGN 287 (394)
T ss_pred --eccchhccccccceecccccccccccc-ccccCccCEEeccCc
Confidence 224556677778888888888777766 333 77777777543
No 36
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=4.6e-10 Score=101.12 Aligned_cols=180 Identities=19% Similarity=0.111 Sum_probs=110.5
Q ss_pred cccEEeeccccCceeeeccccccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHh
Q 009194 312 RLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAK 391 (540)
Q Consensus 312 ~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~ 391 (540)
.|++++++... ++ ..........+.+|+.|++.+. ++.+--... ...=.+|+.|+++.|..++......++.
T Consensus 186 Rlq~lDLS~s~-it---~stl~~iLs~C~kLk~lSlEg~-~LdD~I~~~---iAkN~~L~~lnlsm~sG~t~n~~~ll~~ 257 (419)
T KOG2120|consen 186 RLQHLDLSNSV-IT---VSTLHGILSQCSKLKNLSLEGL-RLDDPIVNT---IAKNSNLVRLNLSMCSGFTENALQLLLS 257 (419)
T ss_pred hhHHhhcchhh-ee---HHHHHHHHHHHHhhhhcccccc-ccCcHHHHH---HhccccceeeccccccccchhHHHHHHH
Confidence 46666666542 21 1111124556777777777763 333321111 2223678888888888888776666778
Q ss_pred hcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCcc-CCCCccEEEEccCCCccccc-chhhhhhcCC
Q 009194 392 NLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIY-CCQNLTKVTVWSCHRLKYLF-SYSMVNSLGQ 469 (540)
Q Consensus 392 ~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~-~~~~L~~L~l~~C~~l~~l~-~~~~~~~l~~ 469 (540)
+++.|.+|.+++|.-.++..- ..+. --++|+.|+++||.+--... .......+|+
T Consensus 258 scs~L~~LNlsWc~l~~~~Vt-----------------------v~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~ 314 (419)
T KOG2120|consen 258 SCSRLDELNLSWCFLFTEKVT-----------------------VAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPN 314 (419)
T ss_pred hhhhHhhcCchHhhccchhhh-----------------------HHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCc
Confidence 888888888888877665420 1111 13677777777776532211 1233467788
Q ss_pred CcEEEEecccccceeccccccCCCCccccccccceeecccCCC--------CCCCCCCCceEeecCCC
Q 009194 470 LQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPK--------LSSFASPEDVIHTEMQP 529 (540)
Q Consensus 470 L~~L~i~~C~~L~~~~~~~~~~~~~~~~~~~~L~~L~l~~~p~--------L~~~~~l~~l~i~~c~~ 529 (540)
|-+||+++|..++.-+..+ +..|+.|++|+++.|-. +++.|+|.+|++-+|=+
T Consensus 315 l~~LDLSD~v~l~~~~~~~-------~~kf~~L~~lSlsRCY~i~p~~~~~l~s~psl~yLdv~g~vs 375 (419)
T KOG2120|consen 315 LVHLDLSDSVMLKNDCFQE-------FFKFNYLQHLSLSRCYDIIPETLLELNSKPSLVYLDVFGCVS 375 (419)
T ss_pred eeeeccccccccCchHHHH-------HHhcchheeeehhhhcCCChHHeeeeccCcceEEEEeccccC
Confidence 8888888887766633222 44677888888877765 55678888888877744
No 37
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.72 E-value=1.3e-08 Score=102.69 Aligned_cols=187 Identities=24% Similarity=0.277 Sum_probs=149.8
Q ss_pred EEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCC-CCcEEEcCCCccCC-cccccCCCCCCEEEecCC
Q 009194 63 LFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLI-NLQTLCLDWCELAD-IAAIGQLKKLEILSLAYS 140 (540)
Q Consensus 63 ~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~-~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~ 140 (540)
.+....+.. ......+ ..+..+..|++.++.+..++....... +|++|+++++.+.. +..+..+++|+.|+++.|
T Consensus 97 ~l~~~~~~~--~~~~~~~-~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRL--RSNISEL-LELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeecccccc--ccCchhh-hcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCc
Confidence 466666654 2223333 466889999999999999998887885 99999999999998 589999999999999999
Q ss_pred CCcccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecC
Q 009194 141 NINQLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVP 220 (540)
Q Consensus 141 ~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 220 (540)
++..+|...+..++|+.|+++++. +..+|.. +.....|+++.++++... ..+..+.++.++..+.+..+
T Consensus 174 ~l~~l~~~~~~~~~L~~L~ls~N~-i~~l~~~-~~~~~~L~~l~~~~N~~~---------~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 174 DLSDLPKLLSNLSNLNNLDLSGNK-ISDLPPE-IELLSALEELDLSNNSII---------ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred hhhhhhhhhhhhhhhhheeccCCc-cccCchh-hhhhhhhhhhhhcCCcce---------ecchhhhhcccccccccCCc
Confidence 999999888899999999999988 8888885 467777999999988432 34566778888888888888
Q ss_pred CCCCCCccccc-cCccEEEEEecCCCCCCCCccccccccccEEEEec
Q 009194 221 DAEILPPDFVS-VELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKG 266 (540)
Q Consensus 221 ~~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~ 266 (540)
....++..+.. .+++.|.+....+.++.. .....+++.|++++
T Consensus 243 ~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~---~~~~~~l~~L~~s~ 286 (394)
T COG4886 243 KLEDLPESIGNLSNLETLDLSNNQISSISS---LGSLTNLRELDLSG 286 (394)
T ss_pred eeeeccchhccccccceecccccccccccc---ccccCccCEEeccC
Confidence 87766555555 679999887776666533 56778899999887
No 38
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.46 E-value=4.8e-08 Score=90.41 Aligned_cols=161 Identities=21% Similarity=0.262 Sum_probs=74.9
Q ss_pred CCCCccEEEcccCCCCCccc--cHHHHhcCccCcEEEcCCCCCCCC--------------CcccccCCCCcEEEcCCCcc
Q 009194 57 QCPNLQLFLLYTEGNGPMQV--SDHFFEGMEGLKVLQFPGIGSSSL--------------PSSLGRLINLQTLCLDWCEL 120 (540)
Q Consensus 57 ~~~~L~~L~l~~~~~~~~~~--~~~~~~~l~~L~~L~l~~~~~~~l--------------~~~l~~l~~L~~L~l~~~~~ 120 (540)
.+++|+++++++|.+++..+ ..++++.+..|+.|.+.+|.+... ......-++||++...+|++
T Consensus 90 ~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrl 169 (382)
T KOG1909|consen 90 GCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRL 169 (382)
T ss_pred cCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccc
Confidence 55566666666665533222 133344555666666666654320 11122334566666655554
Q ss_pred CC-c-----ccccCCCCCCEEEecCCCCc-----ccchhcCCCCCCCEEECCCCccccccchh---hhhcCCccceEEcc
Q 009194 121 AD-I-----AAIGQLKKLEILSLAYSNIN-----QLPVEIGQLTRLQLLDLSNCWWLEVIAPN---VISKLSQLEELYMG 186 (540)
Q Consensus 121 ~~-~-----~~i~~l~~L~~L~l~~~~~~-----~lp~~~~~l~~L~~L~l~~~~~~~~~~~~---~l~~l~~L~~L~l~ 186 (540)
.+ + ..+...+.|+.+.+..|.+. .+-..+..+++|+.||+..|.+...-... .+..+++|++++++
T Consensus 170 en~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~ 249 (382)
T KOG1909|consen 170 ENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLG 249 (382)
T ss_pred ccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccc
Confidence 43 1 33444455566655555443 22233455666666666555422211111 13345556666666
Q ss_pred CCCcccccccCCCccchhhc-cCCCCccEEEeecCC
Q 009194 187 NGFSGWEKVEGGSNASLVEL-ERLTELTTLEIEVPD 221 (540)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~l-~~l~~L~~L~l~~~~ 221 (540)
+|.+. ..+..+....+ ...++|+.|.+.+|.
T Consensus 250 dcll~----~~Ga~a~~~al~~~~p~L~vl~l~gNe 281 (382)
T KOG1909|consen 250 DCLLE----NEGAIAFVDALKESAPSLEVLELAGNE 281 (382)
T ss_pred ccccc----cccHHHHHHHHhccCCCCceeccCcch
Confidence 55544 11222222223 224556666665555
No 39
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.45 E-value=7.9e-09 Score=93.30 Aligned_cols=66 Identities=23% Similarity=0.135 Sum_probs=44.0
Q ss_pred CCCCccccEEeeccccCceeeeccccccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCC
Q 009194 307 GEGFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCR 379 (540)
Q Consensus 307 ~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~ 379 (540)
...+|+|.+|++++|-.++.- .+.....|+.|++|+++.|..+- .+.+-++...|+|.+|++.+|-
T Consensus 309 ~~rcp~l~~LDLSD~v~l~~~----~~~~~~kf~~L~~lSlsRCY~i~---p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 309 VRRCPNLVHLDLSDSVMLKND----CFQEFFKFNYLQHLSLSRCYDII---PETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred HHhCCceeeeccccccccCch----HHHHHHhcchheeeehhhhcCCC---hHHeeeeccCcceEEEEecccc
Confidence 345778888888877655531 22255677888888888877542 2222227778999999998874
No 40
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.41 E-value=3.3e-09 Score=106.61 Aligned_cols=130 Identities=25% Similarity=0.268 Sum_probs=103.9
Q ss_pred cCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCCcccccCCCCCCEEEecCCCCcccchh-cCCCCCCCEEECCCCc
Q 009194 86 GLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELADIAAIGQLKKLEILSLAYSNINQLPVE-IGQLTRLQLLDLSNCW 164 (540)
Q Consensus 86 ~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l~~L~~L~l~~~~ 164 (540)
.|.+.++++|.+..+..++.-++.|+.|++++|++++...+.+|++|++||+++|.+..+|.- ...+. |+.|.+++|.
T Consensus 165 ~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~ 243 (1096)
T KOG1859|consen 165 KLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNA 243 (1096)
T ss_pred hHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhccccccchhhhh-heeeeecccH
Confidence 466667777777767778888999999999999999877999999999999999999988864 23344 9999999987
Q ss_pred cccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCC
Q 009194 165 WLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILP 226 (540)
Q Consensus 165 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~ 226 (540)
+..+-. +.++.+|+.|++++|.+.. ..-+.-+..+..|+.|++.+|++..-|
T Consensus 244 -l~tL~g--ie~LksL~~LDlsyNll~~-------hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 244 -LTTLRG--IENLKSLYGLDLSYNLLSE-------HSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred -HHhhhh--HHhhhhhhccchhHhhhhc-------chhhhHHHHHHHHHHHhhcCCccccCH
Confidence 666655 8899999999999987651 123455667788999999998755443
No 41
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.34 E-value=4.1e-07 Score=64.33 Aligned_cols=55 Identities=29% Similarity=0.375 Sum_probs=25.3
Q ss_pred cCcEEEcCCCCCCCCC-cccccCCCCcEEEcCCCccCC--cccccCCCCCCEEEecCC
Q 009194 86 GLKVLQFPGIGSSSLP-SSLGRLINLQTLCLDWCELAD--IAAIGQLKKLEILSLAYS 140 (540)
Q Consensus 86 ~L~~L~l~~~~~~~l~-~~l~~l~~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~ 140 (540)
+|++|++++|.+..+| ..+.++++|++|++++|.++. +..+.++++|++|++++|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 3444444444444443 233444444444444444443 234444444444444444
No 42
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.32 E-value=3e-07 Score=97.04 Aligned_cols=103 Identities=19% Similarity=0.269 Sum_probs=44.4
Q ss_pred CccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCC--CCCcccccCCCCcEEEcCCCccCCcccccCCCCCCEEEe
Q 009194 60 NLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSS--SLPSSLGRLINLQTLCLDWCELADIAAIGQLKKLEILSL 137 (540)
Q Consensus 60 ~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~--~l~~~l~~l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~l 137 (540)
+|++|+++|.......++..+...+|.|+.|.+.+-.+. ++-.-..++++|+.||+++++++....+++|++|++|.+
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~GIS~LknLq~L~m 202 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLSGISRLKNLQVLSM 202 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcHHHhccccHHHHhc
Confidence 444444444443334444444344444444444443332 122222344445555555544444444444555554444
Q ss_pred cCCCCcccc--hhcCCCCCCCEEECCC
Q 009194 138 AYSNINQLP--VEIGQLTRLQLLDLSN 162 (540)
Q Consensus 138 ~~~~~~~lp--~~~~~l~~L~~L~l~~ 162 (540)
.+-.+..-. ..+.+|++|++||++.
T Consensus 203 rnLe~e~~~~l~~LF~L~~L~vLDIS~ 229 (699)
T KOG3665|consen 203 RNLEFESYQDLIDLFNLKKLRVLDISR 229 (699)
T ss_pred cCCCCCchhhHHHHhcccCCCeeeccc
Confidence 443333111 1234444555555444
No 43
>PLN03150 hypothetical protein; Provisional
Probab=98.31 E-value=1.8e-06 Score=91.46 Aligned_cols=104 Identities=22% Similarity=0.279 Sum_probs=77.2
Q ss_pred CCcEEEcCCCccCC--cccccCCCCCCEEEecCCCCc-ccchhcCCCCCCCEEECCCCccccccchhhhhcCCccceEEc
Q 009194 109 NLQTLCLDWCELAD--IAAIGQLKKLEILSLAYSNIN-QLPVEIGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYM 185 (540)
Q Consensus 109 ~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~-~lp~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l 185 (540)
.++.|+++++.+.. |..++++++|+.|++++|.+. .+|..++.+++|+.|++++|.....+|.. ++++++|+.|++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~-l~~L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPES-LGQLTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchH-HhcCCCCCEEEC
Confidence 37778888888765 678888888888888888776 77878888888888888888866677766 788888888888
Q ss_pred cCCCcccccccCCCccchhhccC-CCCccEEEeecCC
Q 009194 186 GNGFSGWEKVEGGSNASLVELER-LTELTTLEIEVPD 221 (540)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~-l~~L~~L~l~~~~ 221 (540)
++|.+.. ..+..++. ..++..+++.+|.
T Consensus 498 s~N~l~g--------~iP~~l~~~~~~~~~l~~~~N~ 526 (623)
T PLN03150 498 NGNSLSG--------RVPAALGGRLLHRASFNFTDNA 526 (623)
T ss_pred cCCcccc--------cCChHHhhccccCceEEecCCc
Confidence 8877651 22333433 2456677777775
No 44
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.30 E-value=7e-07 Score=63.15 Aligned_cols=55 Identities=35% Similarity=0.531 Sum_probs=27.6
Q ss_pred CCcEEEcCCCccCC-c-ccccCCCCCCEEEecCCCCcccchh-cCCCCCCCEEECCCC
Q 009194 109 NLQTLCLDWCELAD-I-AAIGQLKKLEILSLAYSNINQLPVE-IGQLTRLQLLDLSNC 163 (540)
Q Consensus 109 ~L~~L~l~~~~~~~-~-~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l~~L~~L~l~~~ 163 (540)
+|++|++++|.++. + ..+.++++|++|++++|.++.++.. +..+++|++|++++|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 45555555555544 2 4445555555555555555544432 455555555555544
No 45
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=98.29 E-value=8e-08 Score=99.80 Aligned_cols=123 Identities=18% Similarity=0.143 Sum_probs=68.9
Q ss_pred hcccceeeeccccCcccccccCccCCCCccccEEeeccc-cCceeeeccccccccccCcccceecccccccccccccccC
Q 009194 283 LQRTEDLWLETLEGVQSVVHELDDGEGFPRLKRLLVTDC-SEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQL 361 (540)
Q Consensus 283 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~-~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~ 361 (540)
.+.|+.+.+..+..+.+... ......+++|+.|++.+| ........ ........+++|+.|++..|..+++.....+
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~-~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSL-DALALKCPNLEELDLSGCCLLITLSPL-LLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred CchhhHhhhcccccCChhhH-HHHHhhCchhheecccCcccccccchh-HhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 35566666665555544211 011345667777777662 22222211 1111334456777777777666666554443
Q ss_pred CCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEcccccccc
Q 009194 362 REDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKM 409 (540)
Q Consensus 362 ~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~ 409 (540)
...+++|++|.+.+|..+++.........+++|++|++++|..+++
T Consensus 265 --~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d 310 (482)
T KOG1947|consen 265 --ASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTD 310 (482)
T ss_pred --HhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchH
Confidence 2336777777777777666665555566677777777777777644
No 46
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.23 E-value=6.5e-07 Score=94.50 Aligned_cols=136 Identities=20% Similarity=0.186 Sum_probs=92.0
Q ss_pred CccCcEEEcCCCCC--CCCCccc-ccCCCCcEEEcCCCccCC---cccccCCCCCCEEEecCCCCcccchhcCCCCCCCE
Q 009194 84 MEGLKVLQFPGIGS--SSLPSSL-GRLINLQTLCLDWCELAD---IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQL 157 (540)
Q Consensus 84 l~~L~~L~l~~~~~--~~l~~~l-~~l~~L~~L~l~~~~~~~---~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~ 157 (540)
-.+|++|++++... ...|..+ ..+|.|+.|.+.+-.+.. -....++++|..||+++++++.+ .+++++++|+.
T Consensus 121 r~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~ 199 (699)
T KOG3665|consen 121 RQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQV 199 (699)
T ss_pred HHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHH
Confidence 36889999988653 2344444 368999999998877543 25666889999999999988888 78999999999
Q ss_pred EECCCCccccccchhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCC
Q 009194 158 LDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDA 222 (540)
Q Consensus 158 L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 222 (540)
|.+.+-......--..+-+|++|++||++......... -..-..+.-..+|+||.||.+++..
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~--ii~qYlec~~~LpeLrfLDcSgTdi 262 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTK--IIEQYLECGMVLPELRFLDCSGTDI 262 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchH--HHHHHHHhcccCccccEEecCCcch
Confidence 98877542221111226788999999988654431110 0001122234588999999997763
No 47
>PLN03150 hypothetical protein; Provisional
Probab=98.23 E-value=3.9e-06 Score=88.91 Aligned_cols=104 Identities=22% Similarity=0.389 Sum_probs=89.4
Q ss_pred cCcEEEcCCCCCC-CCCcccccCCCCcEEEcCCCccCC--cccccCCCCCCEEEecCCCCc-ccchhcCCCCCCCEEECC
Q 009194 86 GLKVLQFPGIGSS-SLPSSLGRLINLQTLCLDWCELAD--IAAIGQLKKLEILSLAYSNIN-QLPVEIGQLTRLQLLDLS 161 (540)
Q Consensus 86 ~L~~L~l~~~~~~-~l~~~l~~l~~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~-~lp~~~~~l~~L~~L~l~ 161 (540)
.++.|+++++.+. .+|..+..+++|++|++++|.+.. |..++.+++|+.|++++|.+. .+|..++++++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 4788999999886 588889999999999999999875 678999999999999999887 788889999999999999
Q ss_pred CCccccccchhhhhc-CCccceEEccCCCc
Q 009194 162 NCWWLEVIAPNVISK-LSQLEELYMGNGFS 190 (540)
Q Consensus 162 ~~~~~~~~~~~~l~~-l~~L~~L~l~~~~~ 190 (540)
+|.....+|.. ++. ..++..+++.+|..
T Consensus 499 ~N~l~g~iP~~-l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNSLSGRVPAA-LGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCcccccCChH-HhhccccCceEEecCCcc
Confidence 99877788887 554 45677888887754
No 48
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.06 E-value=4.5e-06 Score=77.65 Aligned_cols=227 Identities=15% Similarity=0.098 Sum_probs=148.4
Q ss_pred hcCCCeEEEccCCCCC-----CCCC-cCCCCCccEEEcccCCC--CCcccc------HHHHhcCccCcEEEcCCCCCCC-
Q 009194 35 IQKDPIAISLPHRDIQ-----ELPE-RLQCPNLQLFLLYTEGN--GPMQVS------DHFFEGMEGLKVLQFPGIGSSS- 99 (540)
Q Consensus 35 ~~~~l~~l~l~~~~~~-----~l~~-~~~~~~L~~L~l~~~~~--~~~~~~------~~~~~~l~~L~~L~l~~~~~~~- 99 (540)
-...+..+++++|.+. .+.+ +.+.+.||..++++--. ...++| ...+..+++|++|++++|.+..
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 3567899999999882 2222 22667888888876432 122333 3344577899999999998752
Q ss_pred ----CCcccccCCCCcEEEcCCCccCC-c-c-------------cccCCCCCCEEEecCCCCcc-----cchhcCCCCCC
Q 009194 100 ----LPSSLGRLINLQTLCLDWCELAD-I-A-------------AIGQLKKLEILSLAYSNINQ-----LPVEIGQLTRL 155 (540)
Q Consensus 100 ----l~~~l~~l~~L~~L~l~~~~~~~-~-~-------------~i~~l~~L~~L~l~~~~~~~-----lp~~~~~l~~L 155 (540)
+-.-+..+..|++|.+.+|.+.. - . .++.-++|+++....|++.. +...+...+.|
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~l 187 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTL 187 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcccc
Confidence 22345678899999999998653 1 1 23445789999999987763 33446677899
Q ss_pred CEEECCCCccccccc----hhhhhcCCccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCCCcc---
Q 009194 156 QLLDLSNCWWLEVIA----PNVISKLSQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEILPPD--- 228 (540)
Q Consensus 156 ~~L~l~~~~~~~~~~----~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~--- 228 (540)
+.+.+..|. +..-. ...+..++.|+.|++..|.++ .....+....+...++|+.|.+..|....=...
T Consensus 188 eevr~~qN~-I~~eG~~al~eal~~~~~LevLdl~DNtft----~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~ 262 (382)
T KOG1909|consen 188 EEVRLSQNG-IRPEGVTALAEALEHCPHLEVLDLRDNTFT----LEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFV 262 (382)
T ss_pred ceEEEeccc-ccCchhHHHHHHHHhCCcceeeecccchhh----hHHHHHHHHHhcccchheeecccccccccccHHHHH
Confidence 999998876 32222 122568999999999999887 223334556677788999999998874432211
Q ss_pred --cc--ccCccEEEEEecCCCCCCCC---ccccccccccEEEEec
Q 009194 229 --FV--SVELQRYKIRIGDGPEDEFD---PLLVKSEASRLMMLKG 266 (540)
Q Consensus 229 --~~--~~~L~~L~l~~~~~~~~~~~---~~~~~~~~L~~L~l~~ 266 (540)
+. .++|+.+.+..+.+...... ......|.|.+|.+++
T Consensus 263 ~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLng 307 (382)
T KOG1909|consen 263 DALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNG 307 (382)
T ss_pred HHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCc
Confidence 11 16888888866554322110 1133467777777776
No 49
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.06 E-value=1.4e-05 Score=77.88 Aligned_cols=153 Identities=20% Similarity=0.218 Sum_probs=89.7
Q ss_pred CCccccEEeeccccCceeeeccccccccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChH
Q 009194 309 GFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFS 388 (540)
Q Consensus 309 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~ 388 (540)
.+++++.|++++| .++.++ .-.++|+.|.+.+|.+++.++.. . .++|++|.+.+|..++.+|
T Consensus 50 ~~~~l~~L~Is~c-~L~sLP--------~LP~sLtsL~Lsnc~nLtsLP~~----L--P~nLe~L~Ls~Cs~L~sLP--- 111 (426)
T PRK15386 50 EARASGRLYIKDC-DIESLP--------VLPNELTEITIENCNNLTTLPGS----I--PEGLEKLTVCHCPEISGLP--- 111 (426)
T ss_pred HhcCCCEEEeCCC-CCcccC--------CCCCCCcEEEccCCCCcccCCch----h--hhhhhheEccCcccccccc---
Confidence 3577888888888 566552 12236888888888887766632 1 2578888888887777664
Q ss_pred HHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCccCCCCccEEEEccCCCcccccchhhhhhc-
Q 009194 389 MAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSL- 467 (540)
Q Consensus 389 ~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l- 467 (540)
++|+.|++.+ .....+. + -.++|+.|.+.+.......+.. ..+
T Consensus 112 -----~sLe~L~L~~-n~~~~L~-----------~----------------LPssLk~L~I~~~n~~~~~~lp---~~LP 155 (426)
T PRK15386 112 -----ESVRSLEIKG-SATDSIK-----------N----------------VPNGLTSLSINSYNPENQARID---NLIS 155 (426)
T ss_pred -----cccceEEeCC-CCCcccc-----------c----------------CcchHhheeccccccccccccc---cccC
Confidence 2577777652 2222211 0 1357777777543322111100 112
Q ss_pred CCCcEEEEecccccceeccccccCCCCccccccccceeecccCCC----CC--CC-CCCCceEeecC
Q 009194 468 GQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPK----LS--SF-ASPEDVIHTEM 527 (540)
Q Consensus 468 ~~L~~L~i~~C~~L~~~~~~~~~~~~~~~~~~~~L~~L~l~~~p~----L~--~~-~~l~~l~i~~c 527 (540)
++|++|+|.+|..+.. .+.++ ++|+.|.+..+.. +. .+ +++ .+.+.+|
T Consensus 156 sSLk~L~Is~c~~i~L---P~~LP--------~SLk~L~ls~n~~~sLeI~~~sLP~nl-~L~f~n~ 210 (426)
T PRK15386 156 PSLKTLSLTGCSNIIL---PEKLP--------ESLQSITLHIEQKTTWNISFEGFPDGL-DIDLQNS 210 (426)
T ss_pred CcccEEEecCCCcccC---ccccc--------ccCcEEEecccccccccCccccccccc-Eechhhh
Confidence 6899999999986531 12222 4788888776431 11 33 334 7777777
No 50
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.05 E-value=1.7e-06 Score=78.49 Aligned_cols=198 Identities=16% Similarity=0.072 Sum_probs=116.6
Q ss_pred ccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCC---CCcccccCCCCcEEEcCCCccCC-cccc-cCCCCCCEE
Q 009194 61 LQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSS---LPSSLGRLINLQTLCLDWCELAD-IAAI-GQLKKLEIL 135 (540)
Q Consensus 61 L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~---l~~~l~~l~~L~~L~l~~~~~~~-~~~i-~~l~~L~~L 135 (540)
+.-+.+.++.+........+-+.+..++.+++.+|.+++ +...+.++|+|++|+++.|.+.. +... ..+.+|++|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 335556666653444444455668888999999998764 44456788999999999988775 4555 477889999
Q ss_pred EecCCCCc--ccchhcCCCCCCCEEECCCCccccccch--hhhh-cCCccceEEccCCCcccccccCCCccchhhc-cCC
Q 009194 136 SLAYSNIN--QLPVEIGQLTRLQLLDLSNCWWLEVIAP--NVIS-KLSQLEELYMGNGFSGWEKVEGGSNASLVEL-ERL 209 (540)
Q Consensus 136 ~l~~~~~~--~lp~~~~~l~~L~~L~l~~~~~~~~~~~--~~l~-~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~l-~~l 209 (540)
-+.++.+. ........++.++.|+++.|.. ..+-. ..+. --+.++.+...+|.... +.....+ +-.
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~-rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~-------w~~~~~l~r~F 198 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL-RQLNLDDNCIEDWSTEVLTLHQLPCLEQL-------WLNKNKLSRIF 198 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchh-hhhccccccccccchhhhhhhcCCcHHHH-------HHHHHhHHhhc
Confidence 88887443 5555677788888888877631 11100 0011 12234444444443320 0001111 235
Q ss_pred CCccEEEeecCCCCCCCccccc---cCccEEEEEecCCCCCCCCccccccccccEEEEec
Q 009194 210 TELTTLEIEVPDAEILPPDFVS---VELQRYKIRIGDGPEDEFDPLLVKSEASRLMMLKG 266 (540)
Q Consensus 210 ~~L~~L~l~~~~~~~~~~~~~~---~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~ 266 (540)
+++..+-+..+++......-.. +.+.-|++....+.+|+.......++.|+.|.+..
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~ 258 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSE 258 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccC
Confidence 6677777776664433332222 44555666666666676666666666666666554
No 51
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.98 E-value=4.2e-05 Score=74.68 Aligned_cols=134 Identities=13% Similarity=0.263 Sum_probs=86.3
Q ss_pred hcccceeeeccccCcccccccCccCCCCc-cccEEeeccccCceeeeccccccccccCcccceecccccccccccccccC
Q 009194 283 LQRTEDLWLETLEGVQSVVHELDDGEGFP-RLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMFLTNLETICYSQL 361 (540)
Q Consensus 283 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~~-~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~ 361 (540)
+++++.|.+.+| .++.+. .+| +|+.|.+.+|.+++.+++ .-.++|++|.+.+|..+..++
T Consensus 51 ~~~l~~L~Is~c-~L~sLP-------~LP~sLtsL~Lsnc~nLtsLP~-------~LP~nLe~L~Ls~Cs~L~sLP---- 111 (426)
T PRK15386 51 ARASGRLYIKDC-DIESLP-------VLPNELTEITIENCNNLTTLPG-------SIPEGLEKLTVCHCPEISGLP---- 111 (426)
T ss_pred hcCCCEEEeCCC-CCcccC-------CCCCCCcEEEccCCCCcccCCc-------hhhhhhhheEccCcccccccc----
Confidence 488899999987 444432 233 699999999999877642 224689999999998776544
Q ss_pred CCCCCCCCCCeEEEee--CCCCccccChHHHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCcc
Q 009194 362 REDQSFSNLRIINVDS--CRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIY 439 (540)
Q Consensus 362 ~~~~~~~~L~~L~l~~--c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~ 439 (540)
+.|+.|.+.. |..+..+| ++|+.|.+.++....... ....
T Consensus 112 ------~sLe~L~L~~n~~~~L~~LP--------ssLk~L~I~~~n~~~~~~------------------------lp~~ 153 (426)
T PRK15386 112 ------ESVRSLEIKGSATDSIKNVP--------NGLTSLSINSYNPENQAR------------------------IDNL 153 (426)
T ss_pred ------cccceEEeCCCCCcccccCc--------chHhheeccccccccccc------------------------cccc
Confidence 4577888753 33345443 357888875533221110 0001
Q ss_pred CCCCccEEEEccCCCcccccchhhhhhcCCCcEEEEecc
Q 009194 440 CCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNC 478 (540)
Q Consensus 440 ~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C 478 (540)
-.++|+.|++.+|..+. +|. .+. .+|++|+++.+
T Consensus 154 LPsSLk~L~Is~c~~i~-LP~-~LP---~SLk~L~ls~n 187 (426)
T PRK15386 154 ISPSLKTLSLTGCSNII-LPE-KLP---ESLQSITLHIE 187 (426)
T ss_pred cCCcccEEEecCCCccc-Ccc-ccc---ccCcEEEeccc
Confidence 13689999999988664 221 111 58888888764
No 52
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=97.94 E-value=1.1e-06 Score=88.97 Aligned_cols=129 Identities=25% Similarity=0.332 Sum_probs=91.1
Q ss_pred CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCCcccccCCCCCCEEE
Q 009194 57 QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELADIAAIGQLKKLEILS 136 (540)
Q Consensus 57 ~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~ 136 (540)
.+..+..+.+..|.+ ...... ...+++|..|++.+|.+..+...+..+++|++|++++|.|+....+..+..|+.|+
T Consensus 70 ~l~~l~~l~l~~n~i--~~~~~~-l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLI--AKILNH-LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELN 146 (414)
T ss_pred HhHhHHhhccchhhh--hhhhcc-cccccceeeeeccccchhhcccchhhhhcchheeccccccccccchhhccchhhhe
Confidence 345555566666654 222222 25678888888888888776665677888888888888888877777888888888
Q ss_pred ecCCCCcccchhcCCCCCCCEEECCCCccccccch-hhhhcCCccceEEccCCCcc
Q 009194 137 LAYSNINQLPVEIGQLTRLQLLDLSNCWWLEVIAP-NVISKLSQLEELYMGNGFSG 191 (540)
Q Consensus 137 l~~~~~~~lp~~~~~l~~L~~L~l~~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~ 191 (540)
+.+|.+..+. .+..++.|+.+++++|. +..+.. . ...+.+++.+++.++.+.
T Consensus 147 l~~N~i~~~~-~~~~l~~L~~l~l~~n~-i~~ie~~~-~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 147 LSGNLISDIS-GLESLKSLKLLDLSYNR-IVDIENDE-LSELISLEELDLGGNSIR 199 (414)
T ss_pred eccCcchhcc-CCccchhhhcccCCcch-hhhhhhhh-hhhccchHHHhccCCchh
Confidence 8888887664 35568888888888877 445444 1 367778888888777654
No 53
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=97.94 E-value=1.6e-06 Score=87.72 Aligned_cols=187 Identities=21% Similarity=0.260 Sum_probs=123.7
Q ss_pred cCCCeEEEccCCCCCCC-CCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEE
Q 009194 36 QKDPIAISLPHRDIQEL-PERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLC 114 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~l-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~ 114 (540)
...+..+++..+.+... .....+.+++.+++.+|.+ ..+... ...+.+|++|++++|.|+.+.. +..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i--~~i~~~-l~~~~~L~~L~ls~N~I~~i~~-l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKI--EKIENL-LSSLVNLQVLDLSFNKITKLEG-LSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhhhhcccccccceeeeeccccch--hhcccc-hhhhhcchheeccccccccccc-hhhccchhhhe
Confidence 44566666777776553 2244778899999999886 443332 3678999999999999887654 56777799999
Q ss_pred cCCCccCCcccccCCCCCCEEEecCCCCcccchh-cCCCCCCCEEECCCCccccccchhhhhcCCccceEEccCCCcccc
Q 009194 115 LDWCELADIAAIGQLKKLEILSLAYSNINQLPVE-IGQLTRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSGWE 193 (540)
Q Consensus 115 l~~~~~~~~~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~ 193 (540)
+.+|.++....+..+++|+.+++++|.+..+... ...+.+++.+++.++. +..+.. +..+..+..+++..+.+.
T Consensus 147 l~~N~i~~~~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~-i~~i~~--~~~~~~l~~~~l~~n~i~-- 221 (414)
T KOG0531|consen 147 LSGNLISDISGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNS-IREIEG--LDLLKKLVLLSLLDNKIS-- 221 (414)
T ss_pred eccCcchhccCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCc-hhcccc--hHHHHHHHHhhcccccce--
Confidence 9999988877777799999999999988877653 5788888989888876 333332 344444444455555443
Q ss_pred cccCCCccchhhccCCC--CccEEEeecCCCCCCCccccc-cCccEEEE
Q 009194 194 KVEGGSNASLVELERLT--ELTTLEIEVPDAEILPPDFVS-VELQRYKI 239 (540)
Q Consensus 194 ~~~~~~~~~~~~l~~l~--~L~~L~l~~~~~~~~~~~~~~-~~L~~L~l 239 (540)
.+..+..+. +|+.+.+..+.+...+..+.. ..+..+.+
T Consensus 222 --------~~~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~ 262 (414)
T KOG0531|consen 222 --------KLEGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDL 262 (414)
T ss_pred --------eccCcccchhHHHHHHhcccCccccccccccccccccccch
Confidence 112222222 267777777776655322222 44444444
No 54
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.92 E-value=1.1e-05 Score=52.12 Aligned_cols=38 Identities=29% Similarity=0.435 Sum_probs=20.1
Q ss_pred CCcEEEcCCCccCC-cccccCCCCCCEEEecCCCCcccc
Q 009194 109 NLQTLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLP 146 (540)
Q Consensus 109 ~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp 146 (540)
+|++|++++|.+++ +..+++|++|++|++++|.++.++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCc
Confidence 45555555555555 333555666666666665555443
No 55
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.85 E-value=3e-05 Score=50.19 Aligned_cols=34 Identities=41% Similarity=0.554 Sum_probs=18.2
Q ss_pred CCCEEEecCCCCcccchhcCCCCCCCEEECCCCc
Q 009194 131 KLEILSLAYSNINQLPVEIGQLTRLQLLDLSNCW 164 (540)
Q Consensus 131 ~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l~~~~ 164 (540)
+|++|++++|+++.+|..+++|++|++|++++|.
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~ 35 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNP 35 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSC
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCC
Confidence 4555555555555555555555555555555554
No 56
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.84 E-value=2e-06 Score=89.26 Aligned_cols=146 Identities=18% Similarity=0.198 Sum_probs=82.6
Q ss_pred CCccccEEeeccccCceeeeccccccccccCcccceecccc-cccccccccccCCCCCCCCCCCeEEEeeCCCCccccCh
Q 009194 309 GFPRLKRLLVTDCSEILHIVGSVRRVRCEVFPLLEALSLMF-LTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSF 387 (540)
Q Consensus 309 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~L~~L~l~~-c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~ 387 (540)
.++.|+.+.+.+|..+.... .......++.|+.|++.+ |......+.........+++|+.|++.+|..+++....
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~---~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~ 262 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDS---LDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLS 262 (482)
T ss_pred hCchhhHhhhcccccCChhh---HHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHH
Confidence 36777777777776655421 111456677777777776 23322222111111444577777777777666666444
Q ss_pred HHHhhcccccEEEEccccccccccccCCCCCCCccceeeecccCCCCCCCccCCCCccEEEEccCCCcccccchhhhhhc
Q 009194 388 SMAKNLLRLQKVKVEDCDDLKMIIGPDMEKPPTTQGFIEINAEDDPVHQGIYCCQNLTKVTVWSCHRLKYLFSYSMVNSL 467 (540)
Q Consensus 388 ~~~~~l~~L~~L~l~~c~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l 467 (540)
.....+++|+.|.+.+|..+++.+ .......++.|++|+++.|..+++-.......++
T Consensus 263 ~l~~~c~~L~~L~l~~c~~lt~~g----------------------l~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c 320 (482)
T KOG1947|consen 263 ALASRCPNLETLSLSNCSNLTDEG----------------------LVSIAERCPSLRELDLSGCHGLTDSGLEALLKNC 320 (482)
T ss_pred HHHhhCCCcceEccCCCCccchhH----------------------HHHHHHhcCcccEEeeecCccchHHHHHHHHHhC
Confidence 444456777777777777655432 1122234567777777777777665444445566
Q ss_pred CCCcEEEEeccc
Q 009194 468 GQLQHLEIRNCR 479 (540)
Q Consensus 468 ~~L~~L~i~~C~ 479 (540)
++|+.+.+.+++
T Consensus 321 ~~l~~l~~~~~~ 332 (482)
T KOG1947|consen 321 PNLRELKLLSLN 332 (482)
T ss_pred cchhhhhhhhcC
Confidence 666665544443
No 57
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.75 E-value=3.1e-06 Score=67.95 Aligned_cols=90 Identities=21% Similarity=0.278 Sum_probs=48.1
Q ss_pred hcCccCcEEEcCCCCCCCCCcccc-cCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEE
Q 009194 82 EGMEGLKVLQFPGIGSSSLPSSLG-RLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLD 159 (540)
Q Consensus 82 ~~l~~L~~L~l~~~~~~~l~~~l~-~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~ 159 (540)
+....|+..++++|.+.++|+.+. +++-.++|++.+|.+++ |..+..++.|+.|+++.|.+...|..+..+.++-.|+
T Consensus 50 ~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 50 SKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLD 129 (177)
T ss_pred hCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhc
Confidence 344445555555555555554442 33455555555555555 5555555556666666555555555555555555555
Q ss_pred CCCCccccccchh
Q 009194 160 LSNCWWLEVIAPN 172 (540)
Q Consensus 160 l~~~~~~~~~~~~ 172 (540)
..++. ...++.+
T Consensus 130 s~~na-~~eid~d 141 (177)
T KOG4579|consen 130 SPENA-RAEIDVD 141 (177)
T ss_pred CCCCc-cccCcHH
Confidence 55544 3444433
No 58
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.71 E-value=7.6e-05 Score=64.33 Aligned_cols=121 Identities=17% Similarity=0.182 Sum_probs=73.2
Q ss_pred CeEEEccCCCCCCCCCcC-CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCccc-ccCCCCcEEEcC
Q 009194 39 PIAISLPHRDIQELPERL-QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSL-GRLINLQTLCLD 116 (540)
Q Consensus 39 l~~l~l~~~~~~~l~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l-~~l~~L~~L~l~ 116 (540)
=+++++.+..+..+.... -......+++++|+. ..... |..++.|.+|.+.+|+|..+...+ ..+++|.+|.+.
T Consensus 21 e~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl--~~l~~--lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Lt 96 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIENLGATLDQFDAIDLTDNDL--RKLDN--LPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILT 96 (233)
T ss_pred ccccccccccccchhhccccccccceecccccch--hhccc--CCCccccceEEecCCcceeeccchhhhccccceEEec
Confidence 455666655554333322 233455677777765 32222 567777777777777777665444 345667777777
Q ss_pred CCccCC---cccccCCCCCCEEEecCCCCcccchh----cCCCCCCCEEECCCC
Q 009194 117 WCELAD---IAAIGQLKKLEILSLAYSNINQLPVE----IGQLTRLQLLDLSNC 163 (540)
Q Consensus 117 ~~~~~~---~~~i~~l~~L~~L~l~~~~~~~lp~~----~~~l~~L~~L~l~~~ 163 (540)
+|.+.+ ...+..+++|++|.+-+|.++.-+.. +..+++|+.||..+.
T Consensus 97 nNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 97 NNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred CcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 777654 45666677777777777766643322 556666666666543
No 59
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=97.70 E-value=1.2e-06 Score=88.64 Aligned_cols=110 Identities=24% Similarity=0.207 Sum_probs=85.5
Q ss_pred HHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCC-cc-cccCCCCCCEEEecCCCCcccchhcCCCCCCC
Q 009194 79 HFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELAD-IA-AIGQLKKLEILSLAYSNINQLPVEIGQLTRLQ 156 (540)
Q Consensus 79 ~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~-~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~ 156 (540)
..+.-++.|+.|++++|.+.+.. .+..|++|++||+++|.+.. |. .-..++ |+.|.+++|.++++ .++.++.+|+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL-~gie~LksL~ 257 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL-RGIENLKSLY 257 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh-hhHHhhhhhh
Confidence 33456789999999999998766 67899999999999999887 42 222344 99999999988887 4689999999
Q ss_pred EEECCCCccccccchhhhhcCCccceEEccCCCcc
Q 009194 157 LLDLSNCWWLEVIAPNVISKLSQLEELYMGNGFSG 191 (540)
Q Consensus 157 ~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~ 191 (540)
.||+++|-..+.---.-+..+..|+.|++.+|.+-
T Consensus 258 ~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 258 GLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 99999875322211122678889999999998664
No 60
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.67 E-value=1.5e-05 Score=72.55 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=35.5
Q ss_pred cCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccc
Q 009194 338 VFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMI 410 (540)
Q Consensus 338 ~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~ 410 (540)
-||++..+.+.+|+ +++...+.- ...+|.+-.|++.. .++.++.....+..+++|..|.+...|-...+
T Consensus 197 ~Fpnv~sv~v~e~P-lK~~s~ek~--se~~p~~~~LnL~~-~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l 265 (418)
T KOG2982|consen 197 IFPNVNSVFVCEGP-LKTESSEKG--SEPFPSLSCLNLGA-NNIDSWASVDALNGFPQLVDLRVSENPLSDPL 265 (418)
T ss_pred hcccchheeeecCc-ccchhhccc--CCCCCcchhhhhcc-cccccHHHHHHHcCCchhheeeccCCcccccc
Confidence 45666666665554 222211111 33455555555554 35555544444556677777777766555433
No 61
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.59 E-value=0.00012 Score=63.02 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=86.4
Q ss_pred CCCeEEEccCCCCCCCCCcCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCC--cccccCCCCcEEE
Q 009194 37 KDPIAISLPHRDIQELPERLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLP--SSLGRLINLQTLC 114 (540)
Q Consensus 37 ~~l~~l~l~~~~~~~l~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~--~~l~~l~~L~~L~ 114 (540)
.....+++++|++..++.+..++.|.+|.+..|.+ ..+...+-..+++|.+|.+.+|.+..+. ..+..+|.|++|.
T Consensus 42 d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrI--t~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Lt 119 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRI--TRIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYLT 119 (233)
T ss_pred cccceecccccchhhcccCCCccccceEEecCCcc--eeeccchhhhccccceEEecCcchhhhhhcchhccCCccceee
Confidence 35678999999998888888999999999999997 6666666667899999999999987543 2367899999999
Q ss_pred cCCCccCC-----cccccCCCCCCEEEecCCC
Q 009194 115 LDWCELAD-----IAAIGQLKKLEILSLAYSN 141 (540)
Q Consensus 115 l~~~~~~~-----~~~i~~l~~L~~L~l~~~~ 141 (540)
+-+|.+++ .-.+.++++|++||...-.
T Consensus 120 ll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt 151 (233)
T KOG1644|consen 120 LLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVT 151 (233)
T ss_pred ecCCchhcccCceeEEEEecCcceEeehhhhh
Confidence 99999775 3688999999999998753
No 62
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.54 E-value=5.6e-06 Score=66.48 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=94.6
Q ss_pred cCCCeEEEccCCCCCCCCC----cCCCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCc
Q 009194 36 QKDPIAISLPHRDIQELPE----RLQCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQ 111 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~l~~----~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~ 111 (540)
......++++.+.+-.+++ .+....|...++++|.+ .++|..+...++.++.+++.+|.+.++|..+..++.|+
T Consensus 26 akE~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~f--k~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr 103 (177)
T KOG4579|consen 26 AKELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGF--KKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALR 103 (177)
T ss_pred HHHhhhcccccchhhHHHHHHHHHhCCceEEEEecccchh--hhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhh
Confidence 4456778888887754443 34667788899999997 88999988889999999999999999999999999999
Q ss_pred EEEcCCCccCC-cccccCCCCCCEEEecCCCCcccchh
Q 009194 112 TLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVE 148 (540)
Q Consensus 112 ~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~ 148 (540)
.|+++.|.+.. |..+..|.+|-+|+..++.+..+|-.
T Consensus 104 ~lNl~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid~d 141 (177)
T KOG4579|consen 104 SLNLRFNPLNAEPRVIAPLIKLDMLDSPENARAEIDVD 141 (177)
T ss_pred hcccccCccccchHHHHHHHhHHHhcCCCCccccCcHH
Confidence 99999999887 88888899999999999987777765
No 63
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.25 E-value=1.6e-05 Score=71.73 Aligned_cols=78 Identities=22% Similarity=0.236 Sum_probs=33.4
Q ss_pred cCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCCcccccCCCCCCEEEecCCCCcccch--hcCCCCCCCEEECCCC
Q 009194 86 GLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELADIAAIGQLKKLEILSLAYSNINQLPV--EIGQLTRLQLLDLSNC 163 (540)
Q Consensus 86 ~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~l~~~~~~~lp~--~~~~l~~L~~L~l~~~ 163 (540)
+.+.|++-+|.+.++.- ..+++.|++|.|+-|.|+....+..+++|+.|++..|.|..+.. .+.++++|+.|++..|
T Consensus 20 ~vkKLNcwg~~L~DIsi-c~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~EN 98 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDISI-CEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLDEN 98 (388)
T ss_pred HhhhhcccCCCccHHHH-HHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhccC
Confidence 34444444444433221 23444444444444444444444444444444444444443322 1344444444444443
Q ss_pred c
Q 009194 164 W 164 (540)
Q Consensus 164 ~ 164 (540)
.
T Consensus 99 P 99 (388)
T KOG2123|consen 99 P 99 (388)
T ss_pred C
Confidence 3
No 64
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.85 E-value=0.00023 Score=61.50 Aligned_cols=73 Identities=14% Similarity=0.216 Sum_probs=61.7
Q ss_pred ccccCcccceecccccccccccccccCCCCCCCCCCCeEEEeeCCCCccccChHHHhhcccccEEEEccccccccc
Q 009194 335 RCEVFPLLEALSLMFLTNLETICYSQLREDQSFSNLRIINVDSCRKLKYLFSFSMAKNLLRLQKVKVEDCDDLKMI 410 (540)
Q Consensus 335 ~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~l~~c~~l~~~ 410 (540)
....+++++.|.+.+|..+.+|+.+.+ .+-.++|+.|.|++|+++++-. ...+..+++|+.|.|.+.+.+...
T Consensus 120 ~L~~l~~i~~l~l~~ck~~dD~~L~~l--~~~~~~L~~L~lsgC~rIT~~G-L~~L~~lknLr~L~l~~l~~v~~~ 192 (221)
T KOG3864|consen 120 HLRDLRSIKSLSLANCKYFDDWCLERL--GGLAPSLQDLDLSGCPRITDGG-LACLLKLKNLRRLHLYDLPYVANL 192 (221)
T ss_pred HHhccchhhhheeccccchhhHHHHHh--cccccchheeeccCCCeechhH-HHHHHHhhhhHHHHhcCchhhhch
Confidence 556788899999999999999998887 4478999999999999999873 456788999999999997766543
No 65
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=8e-05 Score=67.31 Aligned_cols=78 Identities=24% Similarity=0.210 Sum_probs=53.6
Q ss_pred CCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCC---cccccCCCCCCE
Q 009194 58 CPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELAD---IAAIGQLKKLEI 134 (540)
Q Consensus 58 ~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~---~~~i~~l~~L~~ 134 (540)
+.+.+.|+.++|+. .++ ++..+++.|.+|.++-|.|+.+-. +..|.+|+.|+|+.|.|.+ +.-+.++++|+.
T Consensus 18 l~~vkKLNcwg~~L--~DI--sic~kMp~lEVLsLSvNkIssL~p-l~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGL--DDI--SICEKMPLLEVLSLSVNKISSLAP-LQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCc--cHH--HHHHhcccceeEEeeccccccchh-HHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 44566777777775 332 345677788888887777776543 5677778888887777765 355667777777
Q ss_pred EEecCC
Q 009194 135 LSLAYS 140 (540)
Q Consensus 135 L~l~~~ 140 (540)
|-+..|
T Consensus 93 LWL~EN 98 (388)
T KOG2123|consen 93 LWLDEN 98 (388)
T ss_pred HhhccC
Confidence 777665
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.72 E-value=0.00098 Score=60.14 Aligned_cols=108 Identities=22% Similarity=0.206 Sum_probs=46.8
Q ss_pred CCCCcEEEcCCCccCCcccccCCCCCCEEEecCC--CCc-ccchhcCCCCCCCEEECCCCcc--ccccchhhhhcCCccc
Q 009194 107 LINLQTLCLDWCELADIAAIGQLKKLEILSLAYS--NIN-QLPVEIGQLTRLQLLDLSNCWW--LEVIAPNVISKLSQLE 181 (540)
Q Consensus 107 l~~L~~L~l~~~~~~~~~~i~~l~~L~~L~l~~~--~~~-~lp~~~~~l~~L~~L~l~~~~~--~~~~~~~~l~~l~~L~ 181 (540)
+..|+.|++.++.++....+-.|++|++|.++.| .+. .++.-..++++|+++++++|+. +..+++ +.++.+|.
T Consensus 42 ~~~le~ls~~n~gltt~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~p--l~~l~nL~ 119 (260)
T KOG2739|consen 42 FVELELLSVINVGLTTLTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRP--LKELENLK 119 (260)
T ss_pred ccchhhhhhhccceeecccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccch--hhhhcchh
Confidence 3344444444444433344444555555555555 222 2332233345555555555441 122222 34455555
Q ss_pred eEEccCCCcccccccCCCccchhhccCCCCccEEEeecCC
Q 009194 182 ELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPD 221 (540)
Q Consensus 182 ~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 221 (540)
.|++.+|.... -....-..+.-+++|..|+-....
T Consensus 120 ~Ldl~n~~~~~-----l~dyre~vf~ll~~L~~LD~~dv~ 154 (260)
T KOG2739|consen 120 SLDLFNCSVTN-----LDDYREKVFLLLPSLKYLDGCDVD 154 (260)
T ss_pred hhhcccCCccc-----cccHHHHHHHHhhhhccccccccC
Confidence 55555554431 111222334445555555544443
No 67
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.52 E-value=0.00037 Score=60.22 Aligned_cols=72 Identities=15% Similarity=0.203 Sum_probs=57.2
Q ss_pred ccCCCCccEEEEccCCCcccccchhhhhhcCCCcEEEEecccccceeccccccCCCCccccccccceeecccCCCCCCC
Q 009194 438 IYCCQNLTKVTVWSCHRLKYLFSYSMVNSLGQLQHLEIRNCRSIEGVVNTTTLGGRDEFKVFPKLHYLSLHWLPKLSSF 516 (540)
Q Consensus 438 ~~~~~~L~~L~l~~C~~l~~l~~~~~~~~l~~L~~L~i~~C~~L~~~~~~~~~~~~~~~~~~~~L~~L~l~~~p~L~~~ 516 (540)
+.++++++.|.+.+|..+.+.+..-+.+-.++|+.|+|++|+.+++... .. +..+++|+.|.|+++|...+.
T Consensus 121 L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL-~~------L~~lknLr~L~l~~l~~v~~~ 192 (221)
T KOG3864|consen 121 LRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGL-AC------LLKLKNLRRLHLYDLPYVANL 192 (221)
T ss_pred HhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHH-HH------HHHhhhhHHHHhcCchhhhch
Confidence 3457889999999999998886655556779999999999999988522 22 446899999999999887755
No 68
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=96.42 E-value=0.0021 Score=58.06 Aligned_cols=104 Identities=22% Similarity=0.253 Sum_probs=69.3
Q ss_pred CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCC--CC-CCCcccccCCCCcEEEcCCCccCC---cccccCCC
Q 009194 57 QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIG--SS-SLPSSLGRLINLQTLCLDWCELAD---IAAIGQLK 130 (540)
Q Consensus 57 ~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~--~~-~l~~~l~~l~~L~~L~l~~~~~~~---~~~i~~l~ 130 (540)
....|+.+.+.+... ..+.. |..+++|+.|.++.|+ +. .++.....+++|+++++++|++.. ...+..+.
T Consensus 41 ~~~~le~ls~~n~gl--tt~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~ 116 (260)
T KOG2739|consen 41 EFVELELLSVINVGL--TTLTN--FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELE 116 (260)
T ss_pred cccchhhhhhhccce--eeccc--CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhc
Confidence 555666666666654 22222 3567888888888883 32 355445677888888888888775 35666777
Q ss_pred CCCEEEecCCCCcccch----hcCCCCCCCEEECCCCc
Q 009194 131 KLEILSLAYSNINQLPV----EIGQLTRLQLLDLSNCW 164 (540)
Q Consensus 131 ~L~~L~l~~~~~~~lp~----~~~~l~~L~~L~l~~~~ 164 (540)
+|..|++..|..+.+-. .+.-+++|++|+-....
T Consensus 117 nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~ 154 (260)
T KOG2739|consen 117 NLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVD 154 (260)
T ss_pred chhhhhcccCCccccccHHHHHHHHhhhhccccccccC
Confidence 88888888886654332 25567888888765543
No 69
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=95.93 E-value=0.0038 Score=56.58 Aligned_cols=85 Identities=14% Similarity=0.140 Sum_probs=44.3
Q ss_pred cCCCeEEEccCCCCCC-----CCCcC-CCCCccEEEcccCCCC--Cccc------cHHHHhcCccCcEEEcCCCCCC-CC
Q 009194 36 QKDPIAISLPHRDIQE-----LPERL-QCPNLQLFLLYTEGNG--PMQV------SDHFFEGMEGLKVLQFPGIGSS-SL 100 (540)
Q Consensus 36 ~~~l~~l~l~~~~~~~-----l~~~~-~~~~L~~L~l~~~~~~--~~~~------~~~~~~~l~~L~~L~l~~~~~~-~l 100 (540)
...+..+++++|.+.. +...+ +-++|+..++++.-.+ ..++ ....+.+|++|...+++.|.+. ..
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 4567777777777621 22222 4556666666553220 1111 1222346677777777776654 22
Q ss_pred Cc----ccccCCCCcEEEcCCCcc
Q 009194 101 PS----SLGRLINLQTLCLDWCEL 120 (540)
Q Consensus 101 ~~----~l~~l~~L~~L~l~~~~~ 120 (540)
|+ -++.-..|.+|.+++|.+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGl 132 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGL 132 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCC
Confidence 22 334556666777766654
No 70
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=95.83 E-value=0.017 Score=52.48 Aligned_cols=164 Identities=16% Similarity=0.188 Sum_probs=101.8
Q ss_pred CcCCCCCccEEEcccCCCCCccc--cHHHHhcCccCcEEEcCCCCCCCC-----C---------cccccCCCCcEEEcCC
Q 009194 54 ERLQCPNLQLFLLYTEGNGPMQV--SDHFFEGMEGLKVLQFPGIGSSSL-----P---------SSLGRLINLQTLCLDW 117 (540)
Q Consensus 54 ~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~~l~~L~~L~l~~~~~~~l-----~---------~~l~~l~~L~~L~l~~ 117 (540)
...+||+|+..++++|.+++... ..++.++-..|..|.+.+|.+..+ . .....-|.|++.....
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgr 166 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGR 166 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEecc
Confidence 34589999999999999843322 245567889999999999987532 1 1123457788888888
Q ss_pred CccCC-cc-----cccCCCCCCEEEecCCCCcc-----c-chhcCCCCCCCEEECCCCccccccc---hhhhhcCCccce
Q 009194 118 CELAD-IA-----AIGQLKKLEILSLAYSNINQ-----L-PVEIGQLTRLQLLDLSNCWWLEVIA---PNVISKLSQLEE 182 (540)
Q Consensus 118 ~~~~~-~~-----~i~~l~~L~~L~l~~~~~~~-----l-p~~~~~l~~L~~L~l~~~~~~~~~~---~~~l~~l~~L~~ 182 (540)
|++.. +. .+..=.+|+.+.+..|.|.. + -.++..+.+|+.||+..|.+...-. ..++...+.|+.
T Consensus 167 NRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 167 NRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred chhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 88654 31 12222478888888886651 1 1235667888888888876332211 112455667888
Q ss_pred EEccCCCcccccccCCCccchhhcc--CCCCccEEEeecCC
Q 009194 183 LYMGNGFSGWEKVEGGSNASLVELE--RLTELTTLEIEVPD 221 (540)
Q Consensus 183 L~l~~~~~~~~~~~~~~~~~~~~l~--~l~~L~~L~l~~~~ 221 (540)
|.+..|..+ ..+..+....+. ..++|+.|....|.
T Consensus 247 L~lnDClls----~~G~~~v~~~f~e~~~p~l~~L~~~Yne 283 (388)
T COG5238 247 LRLNDCLLS----NEGVKSVLRRFNEKFVPNLMPLPGDYNE 283 (388)
T ss_pred ccccchhhc----cccHHHHHHHhhhhcCCCccccccchhh
Confidence 888888665 222223333332 34566666555544
No 71
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.73 E-value=0.026 Score=46.53 Aligned_cols=98 Identities=15% Similarity=0.319 Sum_probs=34.8
Q ss_pred CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCC-cccccCCCCcEEEcCCCccCC--cccccCCCCCC
Q 009194 57 QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLP-SSLGRLINLQTLCLDWCELAD--IAAIGQLKKLE 133 (540)
Q Consensus 57 ~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~-~~l~~l~~L~~L~l~~~~~~~--~~~i~~l~~L~ 133 (540)
++.+|+.+.+... ...+....|.++..|+.+.+..+ +..++ ..+.+++.++++.+.. .+.. ...+..+.+|+
T Consensus 10 ~~~~l~~i~~~~~---~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 10 NCSNLESITFPNT---IKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp T-TT--EEEETST-----EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred CCCCCCEEEECCC---eeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 4445555554431 23344444555555555555443 33332 2334444555555543 2221 23444455555
Q ss_pred EEEecCCCCcccchh-cCCCCCCCEEECC
Q 009194 134 ILSLAYSNINQLPVE-IGQLTRLQLLDLS 161 (540)
Q Consensus 134 ~L~l~~~~~~~lp~~-~~~l~~L~~L~l~ 161 (540)
.+.+..+ +..++.. +.++ +++.+.+.
T Consensus 85 ~i~~~~~-~~~i~~~~f~~~-~l~~i~~~ 111 (129)
T PF13306_consen 85 NIDIPSN-ITEIGSSSFSNC-NLKEINIP 111 (129)
T ss_dssp EEEETTT--BEEHTTTTTT--T--EEE-T
T ss_pred ccccCcc-ccEEchhhhcCC-CceEEEEC
Confidence 5555432 3333322 3333 55555443
No 72
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=95.40 E-value=0.042 Score=45.28 Aligned_cols=105 Identities=17% Similarity=0.304 Sum_probs=57.2
Q ss_pred cHHHHhcCccCcEEEcCCCCCCCCC-cccccCCCCcEEEcCCCccCC--cccccCCCCCCEEEecCCCCcccchh-cCCC
Q 009194 77 SDHFFEGMEGLKVLQFPGIGSSSLP-SSLGRLINLQTLCLDWCELAD--IAAIGQLKKLEILSLAYSNINQLPVE-IGQL 152 (540)
Q Consensus 77 ~~~~~~~l~~L~~L~l~~~~~~~l~-~~l~~l~~L~~L~l~~~~~~~--~~~i~~l~~L~~L~l~~~~~~~lp~~-~~~l 152 (540)
+...|.++.+|+.+.+.. .+..++ ..+..+.+|+.+.+..+ +.. ...+..+++|+.+.+.. .+..++.. +..+
T Consensus 4 ~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~ 80 (129)
T PF13306_consen 4 GNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNC 80 (129)
T ss_dssp -TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-
T ss_pred CHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccc
Confidence 344567788888888874 454444 35677778888888774 555 26677777888888865 44444443 5668
Q ss_pred CCCCEEECCCCccccccchhhhhcCCccceEEccC
Q 009194 153 TRLQLLDLSNCWWLEVIAPNVISKLSQLEELYMGN 187 (540)
Q Consensus 153 ~~L~~L~l~~~~~~~~~~~~~l~~l~~L~~L~l~~ 187 (540)
++++.+.+..+ +..++...+.++ +|+.+.+..
T Consensus 81 ~~l~~i~~~~~--~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 81 TNLKNIDIPSN--ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp TTECEEEETTT---BEEHTTTTTT--T--EEE-TT
T ss_pred ccccccccCcc--ccEEchhhhcCC-CceEEEECC
Confidence 88888887653 455555556666 777777654
No 73
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.20 E-value=0.0089 Score=31.98 Aligned_cols=19 Identities=32% Similarity=0.557 Sum_probs=10.4
Q ss_pred CCEEEecCCCCcccchhcC
Q 009194 132 LEILSLAYSNINQLPVEIG 150 (540)
Q Consensus 132 L~~L~l~~~~~~~lp~~~~ 150 (540)
|++|++++|.++.+|..++
T Consensus 2 L~~Ldls~n~l~~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPSSFS 20 (22)
T ss_dssp ESEEEETSSEESEEGTTTT
T ss_pred ccEEECCCCcCEeCChhhc
Confidence 5555555555555555443
No 74
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.18 E-value=0.022 Score=30.44 Aligned_cols=16 Identities=38% Similarity=0.621 Sum_probs=6.6
Q ss_pred CcEEEcCCCCCCCCCc
Q 009194 87 LKVLQFPGIGSSSLPS 102 (540)
Q Consensus 87 L~~L~l~~~~~~~l~~ 102 (540)
|++|++++|+++.+|.
T Consensus 2 L~~Ldls~n~l~~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPS 17 (22)
T ss_dssp ESEEEETSSEESEEGT
T ss_pred ccEEECCCCcCEeCCh
Confidence 3444444444443333
No 75
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=93.00 E-value=0.076 Score=26.27 Aligned_cols=16 Identities=31% Similarity=0.607 Sum_probs=6.1
Q ss_pred CCCEEEecCCCCcccc
Q 009194 131 KLEILSLAYSNINQLP 146 (540)
Q Consensus 131 ~L~~L~l~~~~~~~lp 146 (540)
+|+.|++++|+++++|
T Consensus 2 ~L~~L~l~~n~L~~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLTSLP 17 (17)
T ss_dssp T-SEEEETSS--SSE-
T ss_pred ccCEEECCCCCCCCCc
Confidence 4555555555544443
No 76
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=89.61 E-value=0.18 Score=28.13 Aligned_cols=17 Identities=18% Similarity=0.356 Sum_probs=10.7
Q ss_pred CCccEEEEccCCCcccc
Q 009194 442 QNLTKVTVWSCHRLKYL 458 (540)
Q Consensus 442 ~~L~~L~l~~C~~l~~l 458 (540)
++|++|++++|+++++.
T Consensus 2 ~~L~~L~l~~C~~itD~ 18 (26)
T smart00367 2 PNLRELDLSGCTNITDE 18 (26)
T ss_pred CCCCEeCCCCCCCcCHH
Confidence 55666666666666654
No 77
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=89.56 E-value=0.15 Score=28.49 Aligned_cols=18 Identities=22% Similarity=0.510 Sum_probs=13.2
Q ss_pred cCCCcEEEEeccccccee
Q 009194 467 LGQLQHLEIRNCRSIEGV 484 (540)
Q Consensus 467 l~~L~~L~i~~C~~L~~~ 484 (540)
+++|++|++++|+.+++.
T Consensus 1 c~~L~~L~l~~C~~itD~ 18 (26)
T smart00367 1 CPNLRELDLSGCTNITDE 18 (26)
T ss_pred CCCCCEeCCCCCCCcCHH
Confidence 467788888888777764
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=86.85 E-value=0.58 Score=25.98 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=11.1
Q ss_pred CCCCEEEecCCCCcccchh
Q 009194 130 KKLEILSLAYSNINQLPVE 148 (540)
Q Consensus 130 ~~L~~L~l~~~~~~~lp~~ 148 (540)
.+|++|++++|.++.+|..
T Consensus 2 ~~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00369 2 PNLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCCEEECCCCcCCcCCHH
Confidence 4556666666666655554
No 79
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=86.85 E-value=0.58 Score=25.98 Aligned_cols=19 Identities=26% Similarity=0.433 Sum_probs=11.1
Q ss_pred CCCCEEEecCCCCcccchh
Q 009194 130 KKLEILSLAYSNINQLPVE 148 (540)
Q Consensus 130 ~~L~~L~l~~~~~~~lp~~ 148 (540)
.+|++|++++|.++.+|..
T Consensus 2 ~~L~~L~L~~N~l~~lp~~ 20 (26)
T smart00370 2 PNLRELDLSNNQLSSLPPG 20 (26)
T ss_pred CCCCEEECCCCcCCcCCHH
Confidence 4556666666666655554
No 80
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=79.98 E-value=0.048 Score=48.54 Aligned_cols=84 Identities=7% Similarity=-0.024 Sum_probs=53.0
Q ss_pred CCCCccEEEcccCCCCCccccHHHHhcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCC-cccccCCCCCCEE
Q 009194 57 QCPNLQLFLLYTEGNGPMQVSDHFFEGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELAD-IAAIGQLKKLEIL 135 (540)
Q Consensus 57 ~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L 135 (540)
.....+.|+++.|.. ...-.. |+.+..|..|+++.+++..+|..++.+..++.+++..|..+. |.+.+++++++++
T Consensus 40 ~~kr~tvld~~s~r~--vn~~~n-~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRL--VNLGKN-FSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKN 116 (326)
T ss_pred ccceeeeehhhhhHH--Hhhccc-hHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchh
Confidence 455566666666653 222222 355566666777777777777766666667777776666665 6777777777777
Q ss_pred EecCCCCc
Q 009194 136 SLAYSNIN 143 (540)
Q Consensus 136 ~l~~~~~~ 143 (540)
+..++.+.
T Consensus 117 e~k~~~~~ 124 (326)
T KOG0473|consen 117 EQKKTEFF 124 (326)
T ss_pred hhccCcch
Confidence 77666543
No 81
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=77.21 E-value=0.079 Score=47.21 Aligned_cols=84 Identities=13% Similarity=0.037 Sum_probs=64.8
Q ss_pred hcCccCcEEEcCCCCCCCCCcccccCCCCcEEEcCCCccCC-cccccCCCCCCEEEecCCCCcccchhcCCCCCCCEEEC
Q 009194 82 EGMEGLKVLQFPGIGSSSLPSSLGRLINLQTLCLDWCELAD-IAAIGQLKKLEILSLAYSNINQLPVEIGQLTRLQLLDL 160 (540)
Q Consensus 82 ~~l~~L~~L~l~~~~~~~l~~~l~~l~~L~~L~l~~~~~~~-~~~i~~l~~L~~L~l~~~~~~~lp~~~~~l~~L~~L~l 160 (540)
..++..++||++.++...+...++.+..|.-|+++.+.+.. |..++.+..++.++...|.....|.+.+..+.+++++.
T Consensus 39 ~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e~ 118 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNEQ 118 (326)
T ss_pred hccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchhhh
Confidence 56777788888888776666666667777778888777776 77788888888888888888888888888888888887
Q ss_pred CCCcc
Q 009194 161 SNCWW 165 (540)
Q Consensus 161 ~~~~~ 165 (540)
.++.+
T Consensus 119 k~~~~ 123 (326)
T KOG0473|consen 119 KKTEF 123 (326)
T ss_pred ccCcc
Confidence 77653
No 82
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=66.67 E-value=1.2 Score=24.06 Aligned_cols=14 Identities=36% Similarity=0.344 Sum_probs=5.6
Q ss_pred CCCcEEEcCCCccC
Q 009194 108 INLQTLCLDWCELA 121 (540)
Q Consensus 108 ~~L~~L~l~~~~~~ 121 (540)
++|++|++++|.++
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34455555554443
No 83
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=64.87 E-value=4.3 Score=22.60 Aligned_cols=17 Identities=24% Similarity=0.468 Sum_probs=12.1
Q ss_pred CCCEEEecCCCCcccch
Q 009194 131 KLEILSLAYSNINQLPV 147 (540)
Q Consensus 131 ~L~~L~l~~~~~~~lp~ 147 (540)
+|+.|++++|+++++|+
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 56777777777777765
No 84
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=57.22 E-value=9.4 Score=21.30 Aligned_cols=14 Identities=36% Similarity=0.482 Sum_probs=7.6
Q ss_pred CCCCEEEecCCCCc
Q 009194 130 KKLEILSLAYSNIN 143 (540)
Q Consensus 130 ~~L~~L~l~~~~~~ 143 (540)
.+|+.|+++.|.|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 45555555555554
No 85
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=55.27 E-value=0.46 Score=48.65 Aligned_cols=159 Identities=23% Similarity=0.229 Sum_probs=72.8
Q ss_pred ccEEEcccCCCCCc--cccHHHHhcCccCcEEEcCCCCCCC-----CCcccccC-CCCcEEEcCCCccCC------cccc
Q 009194 61 LQLFLLYTEGNGPM--QVSDHFFEGMEGLKVLQFPGIGSSS-----LPSSLGRL-INLQTLCLDWCELAD------IAAI 126 (540)
Q Consensus 61 L~~L~l~~~~~~~~--~~~~~~~~~l~~L~~L~l~~~~~~~-----l~~~l~~l-~~L~~L~l~~~~~~~------~~~i 126 (540)
+..+.+.+|..... ......+.....|..|++++|.+.. +-..+... ..+++|++..|.++. ...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 55555666554111 1112233455666666666666542 11112221 345666666666442 1444
Q ss_pred cCCCCCCEEEecCCCCc-----ccchhcC----CCCCCCEEECCCCccccccc---hhhhhcCCc-cceEEccCCCcccc
Q 009194 127 GQLKKLEILSLAYSNIN-----QLPVEIG----QLTRLQLLDLSNCWWLEVIA---PNVISKLSQ-LEELYMGNGFSGWE 193 (540)
Q Consensus 127 ~~l~~L~~L~l~~~~~~-----~lp~~~~----~l~~L~~L~l~~~~~~~~~~---~~~l~~l~~-L~~L~l~~~~~~~~ 193 (540)
....+++.++++.|.+. .++..+. ...++++|.+.+|....... ..++...+. ++.|++..|.....
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 55666666666666442 2222222 35566666666665221111 111233333 44555555544311
Q ss_pred cccCCCccchhhccCC-CCccEEEeecCCCC
Q 009194 194 KVEGGSNASLVELERL-TELTTLEIEVPDAE 223 (540)
Q Consensus 194 ~~~~~~~~~~~~l~~l-~~L~~L~l~~~~~~ 223 (540)
........+..+ ..++.+++..|.+.
T Consensus 249 ----g~~~L~~~l~~~~~~l~~l~l~~nsi~ 275 (478)
T KOG4308|consen 249 ----GVEKLLPCLSVLSETLRVLDLSRNSIT 275 (478)
T ss_pred ----HHHHHHHHhcccchhhhhhhhhcCCcc
Confidence 111222333444 45666666666643
No 86
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=40.12 E-value=21 Score=20.12 Aligned_cols=13 Identities=31% Similarity=0.307 Sum_probs=7.3
Q ss_pred CCcEEEcCCCccC
Q 009194 109 NLQTLCLDWCELA 121 (540)
Q Consensus 109 ~L~~L~l~~~~~~ 121 (540)
+|++|++++|.+.
T Consensus 3 ~L~~LdL~~N~i~ 15 (28)
T smart00368 3 SLRELDLSNNKLG 15 (28)
T ss_pred ccCEEECCCCCCC
Confidence 4555566555554
No 87
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=27.09 E-value=3.4 Score=42.44 Aligned_cols=180 Identities=21% Similarity=0.171 Sum_probs=116.0
Q ss_pred CeEEEccCCCCCCCC-----C-cCCCCCccEEEcccCCCCCccccHHHHh---cC-ccCcEEEcCCCCCCC-----CCcc
Q 009194 39 PIAISLPHRDIQELP-----E-RLQCPNLQLFLLYTEGNGPMQVSDHFFE---GM-EGLKVLQFPGIGSSS-----LPSS 103 (540)
Q Consensus 39 l~~l~l~~~~~~~l~-----~-~~~~~~L~~L~l~~~~~~~~~~~~~~~~---~l-~~L~~L~l~~~~~~~-----l~~~ 103 (540)
++++++.+|.+..-. . ....+.|..|++++|.+. ......+.. .. +.+++|.+..|.++. +...
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~-~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~ 167 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLG-DEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAV 167 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCc-cHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHH
Confidence 778888888873321 1 226678888999999872 222222222 22 456778888887653 4555
Q ss_pred cccCCCCcEEEcCCCccCC------ccccc----CCCCCCEEEecCCCCc-----ccchhcCCCCC-CCEEECCCCcccc
Q 009194 104 LGRLINLQTLCLDWCELAD------IAAIG----QLKKLEILSLAYSNIN-----QLPVEIGQLTR-LQLLDLSNCWWLE 167 (540)
Q Consensus 104 l~~l~~L~~L~l~~~~~~~------~~~i~----~l~~L~~L~l~~~~~~-----~lp~~~~~l~~-L~~L~l~~~~~~~ 167 (540)
+....+++.++++.|.+.. +..+. ...++++|.+.+|.++ .+...+...+. +..+++..|. +.
T Consensus 168 L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~-l~ 246 (478)
T KOG4308|consen 168 LEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNK-LG 246 (478)
T ss_pred HhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcC-cc
Confidence 6667889999999888531 13333 5778999999998766 22233555555 6778888776 33
Q ss_pred cc-----chhhhhcC-CccceEEccCCCcccccccCCCccchhhccCCCCccEEEeecCCCCCC
Q 009194 168 VI-----APNVISKL-SQLEELYMGNGFSGWEKVEGGSNASLVELERLTELTTLEIEVPDAEIL 225 (540)
Q Consensus 168 ~~-----~~~~l~~l-~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~ 225 (540)
+. .+. +..+ ..+++++++.|.+. ..........+..+++++.+.++.|.....
T Consensus 247 d~g~~~L~~~-l~~~~~~l~~l~l~~nsi~----~~~~~~L~~~l~~~~~l~~l~l~~n~l~~~ 305 (478)
T KOG4308|consen 247 DVGVEKLLPC-LSVLSETLRVLDLSRNSIT----EKGVRDLAEVLVSCRQLEELSLSNNPLTDY 305 (478)
T ss_pred hHHHHHHHHH-hcccchhhhhhhhhcCCcc----ccchHHHHHHHhhhHHHHHhhcccCccccH
Confidence 22 222 3344 56789999988876 222334455667778899999998885543
Done!