Query 009195
Match_columns 540
No_of_seqs 280 out of 2428
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 21:35:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009195.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009195hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 3.3E-44 7.3E-49 387.7 34.2 460 49-523 15-570 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 3.7E-30 8.1E-35 266.1 29.0 386 63-521 15-495 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.6E-27 3.4E-32 257.2 39.1 380 64-521 9-484 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 6E-27 1.3E-31 252.3 39.6 375 64-518 5-473 (475)
5 PRK15462 dipeptide/tripeptide 100.0 5.9E-26 1.3E-30 242.5 36.9 396 66-522 6-488 (493)
6 PRK09584 tppB putative tripept 100.0 1.7E-25 3.6E-30 242.5 39.7 388 66-522 18-488 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 99.9 2.5E-24 5.4E-29 237.3 30.3 267 83-409 1-274 (654)
8 TIGR00887 2A0109 phosphate:H+ 99.9 1.4E-22 3E-27 220.1 29.8 181 65-275 12-220 (502)
9 TIGR01299 synapt_SV2 synaptic 99.9 1.3E-22 2.8E-27 226.4 27.9 176 67-278 165-353 (742)
10 KOG0569 Permease of the major 99.9 3.7E-23 8E-28 218.1 22.0 338 108-531 63-472 (485)
11 PRK10077 xylE D-xylose transpo 99.9 7E-22 1.5E-26 212.9 25.4 185 68-276 11-211 (479)
12 KOG0254 Predicted transporter 99.9 8.1E-22 1.7E-26 214.7 24.0 339 106-532 90-502 (513)
13 PRK11663 regulatory protein Uh 99.9 7.7E-20 1.7E-24 195.0 33.5 167 70-272 24-190 (434)
14 PRK03545 putative arabinose tr 99.9 9.3E-20 2E-24 191.4 33.3 176 66-277 6-181 (390)
15 PRK05122 major facilitator sup 99.9 3.5E-19 7.6E-24 187.3 33.6 177 67-270 13-189 (399)
16 PRK11551 putative 3-hydroxyphe 99.9 2.7E-19 5.9E-24 188.5 32.2 176 65-276 11-186 (406)
17 TIGR00879 SP MFS transporter, 99.9 1.9E-20 4.1E-25 199.8 23.4 152 94-277 52-214 (481)
18 PRK10489 enterobactin exporter 99.9 3.1E-19 6.6E-24 189.2 30.7 172 74-276 22-193 (417)
19 COG2814 AraJ Arabinose efflux 99.9 1.4E-18 3.1E-23 178.4 34.2 183 63-281 7-189 (394)
20 PRK10642 proline/glycine betai 99.9 1.1E-18 2.3E-23 189.2 35.3 175 68-270 15-203 (490)
21 TIGR02332 HpaX 4-hydroxyphenyl 99.9 8.9E-19 1.9E-23 185.6 31.4 178 65-278 4-187 (412)
22 PRK09705 cynX putative cyanate 99.9 9.4E-19 2E-23 184.2 31.4 150 86-272 26-176 (393)
23 PRK12382 putative transporter; 99.8 1.3E-18 2.8E-23 182.7 31.7 172 70-268 16-187 (392)
24 TIGR00893 2A0114 d-galactonate 99.8 1.2E-18 2.6E-23 180.7 30.7 154 90-278 14-167 (399)
25 TIGR00903 2A0129 major facilit 99.8 1.6E-18 3.4E-23 180.8 30.4 155 88-278 9-163 (368)
26 PRK10054 putative transporter; 99.8 1.7E-18 3.6E-23 182.5 30.7 174 68-277 6-179 (395)
27 PRK11646 multidrug resistance 99.8 2.2E-18 4.7E-23 181.9 31.2 168 72-275 13-180 (400)
28 PRK11273 glpT sn-glycerol-3-ph 99.8 1.4E-18 3.1E-23 186.3 30.1 155 91-277 50-205 (452)
29 TIGR00891 2A0112 putative sial 99.8 1.9E-18 4.2E-23 180.9 30.5 175 63-273 6-182 (405)
30 PRK15402 multidrug efflux syst 99.8 4.4E-18 9.4E-23 179.6 33.2 172 71-278 15-186 (406)
31 PRK12307 putative sialic acid 99.8 1.1E-18 2.4E-23 185.1 27.1 168 65-268 14-181 (426)
32 PRK10504 putative transporter; 99.8 8.8E-18 1.9E-22 180.8 33.3 178 68-281 9-186 (471)
33 PRK10213 nepI ribonucleoside t 99.8 1.8E-17 3.9E-22 174.6 34.6 177 61-273 12-188 (394)
34 TIGR00898 2A0119 cation transp 99.8 2.6E-19 5.6E-24 194.5 21.1 146 94-277 113-261 (505)
35 PF00083 Sugar_tr: Sugar (and 99.8 1.4E-23 3.1E-28 224.4 -12.4 337 106-527 47-450 (451)
36 PRK09556 uhpT sugar phosphate 99.8 1.8E-18 3.9E-23 186.3 26.8 156 92-277 51-209 (467)
37 PRK09952 shikimate transporter 99.8 1.4E-17 2.9E-22 178.0 33.4 178 64-269 17-209 (438)
38 COG2271 UhpC Sugar phosphate p 99.8 2.4E-18 5.2E-23 174.8 25.5 175 70-279 26-205 (448)
39 TIGR00892 2A0113 monocarboxyla 99.8 4.8E-18 1E-22 182.3 29.1 151 93-279 42-193 (455)
40 PLN00028 nitrate transmembrane 99.8 6.3E-17 1.4E-21 174.7 36.2 175 67-278 34-217 (476)
41 PRK09874 drug efflux system pr 99.8 3.2E-17 6.9E-22 172.6 32.9 172 70-278 15-191 (408)
42 TIGR00894 2A0114euk Na(+)-depe 99.8 8.9E-18 1.9E-22 180.6 29.2 147 99-278 70-217 (465)
43 TIGR00900 2A0121 H+ Antiporter 99.8 1.5E-17 3.2E-22 171.4 29.6 173 74-277 4-176 (365)
44 PRK10406 alpha-ketoglutarate t 99.8 4.9E-17 1.1E-21 173.3 33.7 178 67-272 20-211 (432)
45 PRK15403 multidrug efflux syst 99.8 9.2E-17 2E-21 170.3 35.4 149 95-278 41-189 (413)
46 PRK10091 MFS transport protein 99.8 5.3E-17 1.2E-21 170.1 32.8 171 70-276 4-174 (382)
47 TIGR00890 2A0111 Oxalate/Forma 99.8 1.2E-17 2.6E-22 172.6 26.8 157 85-278 19-175 (377)
48 PRK03893 putative sialic acid 99.8 3.3E-17 7.1E-22 177.4 31.1 168 65-268 16-183 (496)
49 PRK03699 putative transporter; 99.8 7E-17 1.5E-21 169.9 32.7 175 65-275 3-178 (394)
50 PRK14995 methyl viologen resis 99.8 2.8E-17 6.1E-22 178.3 30.4 180 67-282 4-184 (495)
51 TIGR00710 efflux_Bcr_CflA drug 99.8 1.2E-16 2.7E-21 166.3 33.7 177 67-279 3-179 (385)
52 KOG2532 Permease of the major 99.8 7.2E-18 1.6E-22 179.6 23.9 148 99-279 67-215 (466)
53 cd06174 MFS The Major Facilita 99.8 5.1E-17 1.1E-21 165.9 29.0 170 73-278 3-172 (352)
54 TIGR00897 2A0118 polyol permea 99.8 2.9E-16 6.3E-21 165.7 35.2 172 65-268 9-181 (402)
55 TIGR00712 glpT glycerol-3-phos 99.8 4.4E-17 9.6E-22 173.9 29.3 156 91-278 48-204 (438)
56 PRK10473 multidrug efflux syst 99.8 1.5E-16 3.3E-21 167.0 32.8 171 72-278 6-176 (392)
57 TIGR00899 2A0120 sugar efflux 99.8 1.3E-16 2.8E-21 165.7 30.0 169 75-278 3-174 (375)
58 KOG1330 Sugar transporter/spin 99.8 1.3E-18 2.9E-23 178.2 14.0 181 63-279 27-208 (493)
59 PRK03633 putative MFS family t 99.8 2.1E-16 4.4E-21 165.6 30.7 155 68-258 5-159 (381)
60 TIGR00711 efflux_EmrB drug res 99.8 9E-17 1.9E-21 173.2 28.3 176 70-281 3-178 (485)
61 PF07690 MFS_1: Major Facilita 99.8 4.5E-17 9.8E-22 167.1 24.2 167 75-276 2-168 (352)
62 PRK15075 citrate-proton sympor 99.8 3.5E-16 7.5E-21 166.9 31.5 176 64-267 10-199 (434)
63 PRK15011 sugar efflux transpor 99.8 5.9E-16 1.3E-20 162.9 31.7 173 70-278 16-192 (393)
64 PRK11652 emrD multidrug resist 99.8 8.6E-16 1.9E-20 161.4 32.1 174 67-276 6-179 (394)
65 TIGR00895 2A0115 benzoate tran 99.8 2.9E-16 6.2E-21 163.8 27.9 176 65-276 13-188 (398)
66 TIGR00881 2A0104 phosphoglycer 99.8 1.3E-16 2.8E-21 165.0 25.0 153 91-278 16-169 (379)
67 PRK11195 lysophospholipid tran 99.7 2.9E-15 6.3E-20 157.7 33.1 162 71-272 5-166 (393)
68 PRK15034 nitrate/nitrite trans 99.7 4.6E-15 9.9E-20 157.4 33.8 179 69-279 34-231 (462)
69 PRK11043 putative transporter; 99.7 3.4E-15 7.3E-20 157.3 32.1 166 78-278 12-179 (401)
70 KOG0252 Inorganic phosphate tr 99.7 3.8E-16 8.3E-21 159.6 23.3 141 102-270 81-236 (538)
71 PF00854 PTR2: POT family; In 99.7 1.8E-17 3.9E-22 173.3 13.8 268 136-436 1-305 (372)
72 KOG0255 Synaptic vesicle trans 99.7 1.8E-16 3.9E-21 173.1 22.0 140 98-275 111-250 (521)
73 PRK11102 bicyclomycin/multidru 99.7 7.3E-15 1.6E-19 153.1 31.1 155 88-278 10-164 (377)
74 PRK09528 lacY galactoside perm 99.7 2.6E-15 5.6E-20 159.3 26.9 178 70-278 11-189 (420)
75 PRK08633 2-acyl-glycerophospho 99.7 1E-14 2.2E-19 173.7 33.7 154 70-255 10-165 (1146)
76 TIGR00902 2A0127 phenyl propri 99.7 2.9E-14 6.3E-19 149.5 32.3 157 74-268 9-167 (382)
77 COG2223 NarK Nitrate/nitrite t 99.7 1.8E-14 3.9E-19 146.9 29.4 182 65-281 10-194 (417)
78 PF05977 MFS_3: Transmembrane 99.7 6.4E-14 1.4E-18 151.8 34.1 177 71-278 12-188 (524)
79 TIGR00882 2A0105 oligosacchari 99.7 1.5E-14 3.3E-19 152.1 28.1 178 70-277 3-180 (396)
80 PRK10133 L-fucose transporter; 99.7 5.6E-14 1.2E-18 150.1 32.5 156 65-253 22-177 (438)
81 PRK11010 ampG muropeptide tran 99.7 6.4E-14 1.4E-18 151.8 32.5 176 68-277 11-192 (491)
82 TIGR00886 2A0108 nitrite extru 99.7 2.1E-14 4.7E-19 148.7 26.1 158 71-264 3-171 (366)
83 PRK06814 acylglycerophosphoeth 99.7 4.4E-14 9.5E-19 168.3 32.0 146 96-275 42-190 (1140)
84 TIGR00883 2A0106 metabolite-pr 99.6 5.5E-14 1.2E-18 146.2 26.7 165 81-273 5-184 (394)
85 KOG0253 Synaptic vesicle trans 99.6 2.6E-14 5.6E-19 142.2 22.1 160 79-275 87-246 (528)
86 PRK10642 proline/glycine betai 99.6 9.4E-15 2E-19 158.4 20.8 182 65-278 246-428 (490)
87 TIGR00889 2A0110 nucleoside tr 99.6 4.9E-13 1.1E-17 142.0 32.1 161 72-274 5-174 (418)
88 PF06609 TRI12: Fungal trichot 99.6 2.1E-13 4.5E-18 147.9 28.5 152 90-278 64-215 (599)
89 PRK11128 putative 3-phenylprop 99.6 3.8E-13 8.3E-18 140.9 29.8 155 79-273 14-172 (382)
90 TIGR00805 oat sodium-independe 99.6 1E-13 2.2E-18 154.2 26.9 208 65-279 28-280 (633)
91 COG2271 UhpC Sugar phosphate p 99.6 3.3E-15 7.2E-20 152.1 13.5 178 69-278 252-432 (448)
92 TIGR00885 fucP L-fucose:H+ sym 99.6 7E-13 1.5E-17 140.4 31.8 172 71-275 5-202 (410)
93 PRK11902 ampG muropeptide tran 99.6 1.1E-12 2.5E-17 138.3 32.8 165 77-275 7-177 (402)
94 TIGR00896 CynX cyanate transpo 99.6 1E-13 2.2E-18 143.6 24.1 143 91-270 21-165 (355)
95 TIGR00792 gph sugar (Glycoside 99.6 1.2E-13 2.6E-18 146.9 24.7 172 79-278 9-192 (437)
96 TIGR01301 GPH_sucrose GPH fami 99.6 3.4E-12 7.5E-17 136.3 31.5 197 70-283 5-221 (477)
97 KOG2615 Permease of the major 99.5 9.8E-13 2.1E-17 132.0 22.2 116 103-254 66-181 (451)
98 TIGR00806 rfc RFC reduced fola 99.5 9.7E-13 2.1E-17 137.8 20.3 172 70-280 28-203 (511)
99 KOG2504 Monocarboxylate transp 99.5 5.9E-12 1.3E-16 136.0 26.7 175 72-282 45-223 (509)
100 TIGR00788 fbt folate/biopterin 99.5 1.5E-11 3.2E-16 132.6 27.6 177 70-279 27-208 (468)
101 PRK09556 uhpT sugar phosphate 99.5 1.8E-12 3.8E-17 139.7 20.0 177 69-278 258-447 (467)
102 KOG3764 Vesicular amine transp 99.5 1.4E-12 2.9E-17 131.7 17.4 152 99-284 100-251 (464)
103 COG0738 FucP Fucose permease [ 99.5 2.7E-11 5.7E-16 123.2 26.9 136 87-254 30-165 (422)
104 PRK15011 sugar efflux transpor 99.5 5.4E-12 1.2E-16 132.8 23.1 172 72-279 219-390 (393)
105 COG2807 CynX Cyanate permease 99.5 1.1E-10 2.3E-15 117.2 30.1 173 68-278 11-184 (395)
106 TIGR00901 2A0125 AmpG-related 99.5 2.6E-11 5.7E-16 125.5 25.9 157 89-278 7-176 (356)
107 KOG2533 Permease of the major 99.4 3.5E-12 7.6E-17 136.6 18.8 148 96-278 72-225 (495)
108 PRK09952 shikimate transporter 99.4 1.3E-11 2.8E-16 131.9 22.4 183 66-279 247-432 (438)
109 PRK10429 melibiose:sodium symp 99.4 7.5E-11 1.6E-15 127.3 26.5 172 75-275 12-196 (473)
110 TIGR02718 sider_RhtX_FptX side 99.4 3.1E-10 6.8E-15 119.1 30.3 178 71-280 3-184 (390)
111 TIGR00883 2A0106 metabolite-pr 99.4 4.1E-12 9E-17 132.0 15.8 174 66-270 216-391 (394)
112 TIGR01299 synapt_SV2 synaptic 99.4 1.5E-11 3.2E-16 138.0 20.9 134 109-278 599-732 (742)
113 cd06174 MFS The Major Facilita 99.4 2.2E-11 4.9E-16 124.2 20.1 172 71-277 177-349 (352)
114 PRK09669 putative symporter Ya 99.4 9.1E-11 2E-15 125.5 25.2 177 74-277 14-201 (444)
115 PRK03699 putative transporter; 99.4 2.7E-11 5.9E-16 127.4 20.8 171 70-276 206-376 (394)
116 TIGR00890 2A0111 Oxalate/Forma 99.4 1.5E-11 3.2E-16 127.0 18.5 168 72-273 208-375 (377)
117 PRK05122 major facilitator sup 99.4 3.5E-11 7.6E-16 126.5 21.0 165 79-281 226-390 (399)
118 PRK09848 glucuronide transport 99.4 2.2E-10 4.7E-15 122.8 27.3 155 71-251 10-173 (448)
119 TIGR00899 2A0120 sugar efflux 99.4 5E-11 1.1E-15 123.8 20.7 162 80-277 210-371 (375)
120 PF01306 LacY_symp: LacY proto 99.4 1.5E-10 3.3E-15 120.5 23.7 174 69-278 7-186 (412)
121 PTZ00207 hypothetical protein; 99.4 5.4E-11 1.2E-15 129.9 21.2 178 65-277 24-202 (591)
122 PF03825 Nuc_H_symport: Nucleo 99.4 9.4E-10 2E-14 115.9 29.8 130 73-233 6-135 (400)
123 TIGR00893 2A0114 d-galactonate 99.3 7E-11 1.5E-15 122.4 20.6 180 69-277 215-396 (399)
124 PRK11273 glpT sn-glycerol-3-ph 99.3 4.2E-11 9E-16 128.5 19.2 178 69-278 253-433 (452)
125 PRK11551 putative 3-hydroxyphe 99.3 9.3E-11 2E-15 123.5 21.0 168 74-277 225-393 (406)
126 PRK09874 drug efflux system pr 99.3 7.3E-11 1.6E-15 124.2 20.1 164 80-278 230-396 (408)
127 TIGR00880 2_A_01_02 Multidrug 99.3 9.7E-12 2.1E-16 109.3 11.1 132 112-278 5-136 (141)
128 PRK11663 regulatory protein Uh 99.3 7.5E-11 1.6E-15 125.8 20.1 177 70-278 244-422 (434)
129 PRK11462 putative transporter; 99.3 2.4E-09 5.2E-14 115.2 31.6 177 75-278 15-202 (460)
130 PRK03893 putative sialic acid 99.3 6.4E-11 1.4E-15 128.3 19.0 150 87-269 293-442 (496)
131 PRK09705 cynX putative cyanate 99.3 2.3E-10 5E-15 120.5 22.6 177 70-283 206-384 (393)
132 TIGR00889 2A0110 nucleoside tr 99.3 1E-10 2.2E-15 124.3 19.1 175 74-280 213-402 (418)
133 TIGR00891 2A0112 putative sial 99.3 7.7E-11 1.7E-15 123.4 17.9 165 66-264 235-400 (405)
134 PRK03545 putative arabinose tr 99.3 3.5E-10 7.6E-15 118.8 22.5 171 73-279 209-379 (390)
135 PRK15075 citrate-proton sympor 99.3 1.8E-10 3.9E-15 122.9 20.5 161 67-259 236-398 (434)
136 PF13347 MFS_2: MFS/sugar tran 99.3 2.3E-10 4.9E-15 121.9 21.1 179 78-282 10-200 (428)
137 PRK12382 putative transporter; 99.3 1.3E-10 2.9E-15 121.9 19.0 161 80-278 227-387 (392)
138 PRK09528 lacY galactoside perm 99.3 6.2E-11 1.3E-15 125.8 16.5 155 88-277 242-400 (420)
139 PRK10489 enterobactin exporter 99.3 1.8E-10 4E-15 122.0 19.6 158 86-278 240-397 (417)
140 PRK10406 alpha-ketoglutarate t 99.3 4.1E-10 8.9E-15 120.1 21.9 169 78-278 252-422 (432)
141 TIGR00897 2A0118 polyol permea 99.3 5E-10 1.1E-14 118.2 22.0 176 70-278 223-399 (402)
142 TIGR00902 2A0127 phenyl propri 99.3 5.8E-10 1.2E-14 116.9 21.9 169 69-275 205-374 (382)
143 PF11700 ATG22: Vacuole efflux 99.3 2.3E-08 5E-13 107.5 34.2 57 437-510 409-465 (477)
144 PF11700 ATG22: Vacuole efflux 99.2 6.1E-10 1.3E-14 119.6 21.5 182 68-278 280-466 (477)
145 PRK03633 putative MFS family t 99.2 6.8E-10 1.5E-14 116.2 21.3 154 83-275 214-367 (381)
146 TIGR00879 SP MFS transporter, 99.2 3.6E-10 7.8E-15 120.5 18.4 187 70-281 285-471 (481)
147 PRK11010 ampG muropeptide tran 99.2 1.2E-09 2.6E-14 118.6 22.3 171 79-280 232-403 (491)
148 TIGR00892 2A0113 monocarboxyla 99.2 4E-10 8.7E-15 121.1 17.0 172 70-276 242-417 (455)
149 TIGR00712 glpT glycerol-3-phos 99.2 4.8E-10 1E-14 119.8 17.5 180 70-279 252-432 (438)
150 TIGR00881 2A0104 phosphoglycer 99.2 2.8E-10 6.2E-15 117.6 15.3 161 70-262 217-379 (379)
151 TIGR01272 gluP glucose/galacto 99.2 2.1E-09 4.6E-14 109.5 19.9 163 69-269 140-304 (310)
152 COG2814 AraJ Arabinose efflux 99.2 4.1E-09 8.9E-14 108.9 21.4 177 69-281 211-387 (394)
153 PRK12307 putative sialic acid 99.1 3.1E-09 6.7E-14 112.7 20.7 148 83-264 245-392 (426)
154 KOG4686 Predicted sugar transp 99.1 1.2E-09 2.6E-14 105.7 15.6 173 61-270 256-432 (459)
155 PLN00028 nitrate transmembrane 99.1 2.2E-09 4.8E-14 116.0 18.9 174 72-280 255-433 (476)
156 PRK15402 multidrug efflux syst 99.1 1E-08 2.2E-13 108.2 22.8 173 71-274 217-389 (406)
157 KOG2325 Predicted transporter/ 99.1 2.9E-09 6.4E-14 112.4 18.2 191 61-283 26-232 (488)
158 TIGR02332 HpaX 4-hydroxyphenyl 99.1 1.8E-09 4E-14 114.4 16.6 164 70-268 243-409 (412)
159 TIGR00900 2A0121 H+ Antiporter 99.1 2.8E-09 6E-14 109.7 17.5 153 71-257 212-365 (365)
160 COG2223 NarK Nitrate/nitrite t 99.1 4E-09 8.7E-14 108.1 16.9 182 69-279 218-400 (417)
161 PRK10504 putative transporter; 99.1 8E-09 1.7E-13 111.2 20.3 156 71-258 263-418 (471)
162 COG2211 MelB Na+/melibiose sym 99.1 7.4E-08 1.6E-12 101.7 26.7 183 69-278 12-205 (467)
163 PRK11128 putative 3-phenylprop 99.1 1.5E-08 3.2E-13 106.2 21.3 167 70-274 206-373 (382)
164 TIGR00882 2A0105 oligosacchari 99.1 7.2E-09 1.6E-13 109.0 18.6 168 74-276 220-391 (396)
165 TIGR00894 2A0114euk Na(+)-depe 99.0 1.1E-08 2.5E-13 109.9 20.2 178 67-277 259-447 (465)
166 PRK10091 MFS transport protein 99.0 1.8E-08 3.8E-13 105.7 21.1 169 72-276 202-372 (382)
167 TIGR00895 2A0115 benzoate tran 99.0 6.6E-09 1.4E-13 108.2 17.3 148 69-252 250-397 (398)
168 KOG2563 Permease of the major 99.0 9.1E-08 2E-12 98.9 24.7 163 61-254 37-201 (480)
169 TIGR02718 sider_RhtX_FptX side 99.0 1.7E-08 3.8E-13 105.9 20.2 174 71-274 210-385 (390)
170 TIGR00887 2A0109 phosphate:H+ 99.0 6.4E-09 1.4E-13 113.2 17.2 169 75-275 294-484 (502)
171 TIGR00711 efflux_EmrB drug res 99.0 7.3E-09 1.6E-13 111.6 17.3 155 70-255 256-410 (485)
172 PRK10077 xylE D-xylose transpo 99.0 2.3E-08 5E-13 107.7 20.9 157 94-281 295-458 (479)
173 TIGR00792 gph sugar (Glycoside 99.0 1E-08 2.2E-13 109.1 17.7 160 70-258 223-383 (437)
174 KOG0253 Synaptic vesicle trans 99.0 7.8E-09 1.7E-13 103.6 14.8 147 68-249 325-490 (528)
175 PF05977 MFS_3: Transmembrane 99.0 3E-08 6.5E-13 107.8 20.4 169 74-277 223-391 (524)
176 COG2270 Permeases of the major 99.0 1.2E-08 2.7E-13 104.6 15.9 174 70-278 253-427 (438)
177 PRK10133 L-fucose transporter; 99.0 2.9E-08 6.4E-13 106.1 19.7 165 74-276 263-429 (438)
178 TIGR00710 efflux_Bcr_CflA drug 99.0 6.6E-08 1.4E-12 100.6 21.5 160 73-264 210-370 (385)
179 PRK14995 methyl viologen resis 99.0 1.5E-08 3.3E-13 110.1 17.3 153 70-254 260-412 (495)
180 PRK08633 2-acyl-glycerophospho 99.0 2.4E-08 5.1E-13 119.4 20.3 162 71-267 234-397 (1146)
181 PRK11902 ampG muropeptide tran 99.0 7.8E-08 1.7E-12 101.5 21.8 153 91-278 231-388 (402)
182 PRK10213 nepI ribonucleoside t 98.9 1.2E-07 2.6E-12 100.0 22.5 164 71-271 218-382 (394)
183 TIGR00896 CynX cyanate transpo 98.9 4.7E-08 1E-12 101.1 18.2 153 70-257 198-350 (355)
184 PRK11646 multidrug resistance 98.9 4.1E-08 8.8E-13 103.7 17.8 153 88-275 227-383 (400)
185 PRK10054 putative transporter; 98.9 3.9E-08 8.5E-13 103.7 17.1 170 73-277 210-381 (395)
186 PRK15034 nitrate/nitrite trans 98.9 1.3E-07 2.9E-12 100.7 20.3 183 70-277 253-451 (462)
187 KOG3626 Organic anion transpor 98.9 1.1E-06 2.4E-11 96.8 27.0 207 71-285 99-348 (735)
188 TIGR00898 2A0119 cation transp 98.9 4.8E-08 1.1E-12 106.1 16.1 131 113-278 363-493 (505)
189 PRK09848 glucuronide transport 98.9 6.5E-08 1.4E-12 103.6 16.8 162 70-258 229-391 (448)
190 TIGR00903 2A0129 major facilit 98.8 2E-07 4.3E-12 97.4 19.5 166 69-276 192-361 (368)
191 PRK06814 acylglycerophosphoeth 98.8 9.1E-08 2E-12 114.4 18.7 184 70-268 226-410 (1140)
192 KOG0569 Permease of the major 98.8 2.5E-07 5.4E-12 98.5 19.8 196 65-287 265-461 (485)
193 PF03209 PUCC: PUCC protein; 98.8 5.3E-06 1.1E-10 85.6 28.6 142 96-257 6-153 (403)
194 COG2270 Permeases of the major 98.8 1E-06 2.3E-11 90.7 23.1 127 89-247 35-169 (438)
195 KOG4686 Predicted sugar transp 98.8 1.8E-08 3.9E-13 97.7 9.1 155 70-256 45-199 (459)
196 TIGR00901 2A0125 AmpG-related 98.8 1.4E-07 2.9E-12 97.7 16.3 145 70-239 210-355 (356)
197 PF13347 MFS_2: MFS/sugar tran 98.8 3E-07 6.5E-12 97.9 19.3 162 69-258 225-387 (428)
198 PF05631 DUF791: Protein of un 98.8 9.5E-07 2.1E-11 89.6 21.5 159 96-286 60-222 (354)
199 PRK11195 lysophospholipid tran 98.8 5.3E-07 1.1E-11 95.0 20.7 157 83-275 219-375 (393)
200 COG2807 CynX Cyanate permease 98.8 6.8E-07 1.5E-11 90.2 19.1 170 70-274 209-379 (395)
201 PRK11102 bicyclomycin/multidru 98.7 1.4E-06 3.1E-11 90.5 21.7 147 72-250 197-344 (377)
202 PRK11043 putative transporter; 98.7 2.1E-06 4.6E-11 90.3 22.5 148 81-260 215-362 (401)
203 PF03092 BT1: BT1 family; Int 98.7 9E-06 2E-10 86.8 27.4 162 92-282 12-177 (433)
204 PF07690 MFS_1: Major Facilita 98.7 1.6E-07 3.5E-12 96.1 13.5 142 73-246 210-352 (352)
205 KOG2504 Monocarboxylate transp 98.7 1.8E-07 3.9E-12 101.3 14.1 175 69-279 298-475 (509)
206 PRK10429 melibiose:sodium symp 98.7 1.5E-06 3.2E-11 94.0 20.4 165 69-258 231-396 (473)
207 PRK10473 multidrug efflux syst 98.7 2.3E-06 4.9E-11 89.8 20.9 69 87-156 221-289 (392)
208 TIGR00885 fucP L-fucose:H+ sym 98.6 1.4E-06 3E-11 92.4 18.7 164 71-272 234-404 (410)
209 PRK09669 putative symporter Ya 98.6 9.8E-07 2.1E-11 94.5 17.6 160 71-258 231-391 (444)
210 KOG2532 Permease of the major 98.6 1.7E-06 3.7E-11 92.7 17.3 180 69-278 258-445 (466)
211 TIGR00886 2A0108 nitrite extru 98.6 7.3E-07 1.6E-11 92.2 13.2 139 71-241 227-365 (366)
212 PF03137 OATP: Organic Anion T 98.6 9.7E-09 2.1E-13 112.0 -0.9 205 74-286 8-256 (539)
213 PRK11652 emrD multidrug resist 98.5 1.3E-05 2.7E-10 84.2 21.4 139 89-260 227-365 (394)
214 PF03825 Nuc_H_symport: Nucleo 98.5 1.4E-05 3.1E-10 84.2 21.6 176 73-278 211-393 (400)
215 TIGR00924 yjdL_sub1_fam amino 98.5 5.7E-06 1.2E-10 89.5 18.5 184 70-278 273-466 (475)
216 PF01306 LacY_symp: LacY proto 98.5 1.1E-05 2.4E-10 84.5 19.6 177 70-281 221-401 (412)
217 KOG2816 Predicted transporter 98.5 5.1E-05 1.1E-09 81.2 24.9 159 89-287 41-206 (463)
218 PF06813 Nodulin-like: Nodulin 98.5 1.7E-05 3.7E-10 77.8 19.1 182 67-280 1-182 (250)
219 PRK11462 putative transporter; 98.4 4.6E-05 1E-09 82.1 22.2 157 73-258 232-390 (460)
220 COG0477 ProP Permeases of the 98.4 2.8E-05 6E-10 76.3 18.4 142 95-269 27-174 (338)
221 TIGR01272 gluP glucose/galacto 98.3 6.9E-05 1.5E-09 76.4 20.0 85 185-275 8-108 (310)
222 COG2211 MelB Na+/melibiose sym 98.3 1.7E-05 3.8E-10 83.9 15.7 160 70-257 237-398 (467)
223 PF03209 PUCC: PUCC protein; 98.2 8E-05 1.7E-09 77.0 18.7 167 79-276 218-394 (403)
224 PRK10207 dipeptide/tripeptide 98.2 4.4E-05 9.6E-10 82.9 16.7 175 78-278 278-474 (489)
225 PRK09584 tppB putative tripept 98.2 8.4E-05 1.8E-09 80.9 18.7 142 107-274 318-473 (500)
226 COG0738 FucP Fucose permease [ 98.2 9.6E-05 2.1E-09 76.0 17.6 156 70-263 237-392 (422)
227 PRK15403 multidrug efflux syst 98.2 0.00025 5.4E-09 75.3 21.2 167 70-268 219-385 (413)
228 TIGR01301 GPH_sucrose GPH fami 98.0 0.00031 6.7E-09 75.6 19.0 208 62-282 251-473 (477)
229 KOG3764 Vesicular amine transp 98.0 1.2E-05 2.6E-10 82.1 7.7 173 72-273 273-447 (464)
230 PF00083 Sugar_tr: Sugar (and 98.0 5.6E-08 1.2E-12 104.0 -11.4 189 70-286 253-442 (451)
231 KOG0254 Predicted transporter 98.0 0.00023 5E-09 77.8 16.7 198 65-285 290-488 (513)
232 KOG3762 Predicted transporter 97.9 5.8E-05 1.3E-09 79.9 10.8 160 87-282 389-549 (618)
233 TIGR00788 fbt folate/biopterin 97.9 3.7E-05 8.1E-10 83.0 9.2 136 97-257 280-415 (468)
234 KOG2533 Permease of the major 97.9 0.0001 2.2E-09 79.5 11.9 163 70-265 274-441 (495)
235 KOG3098 Uncharacterized conser 97.9 0.0046 1E-07 65.7 23.7 80 111-220 56-135 (461)
236 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00021 4.6E-09 56.7 9.5 65 78-144 9-73 (77)
237 KOG0252 Inorganic phosphate tr 97.7 8.2E-05 1.8E-09 77.5 7.4 178 69-278 304-496 (538)
238 PF05978 UNC-93: Ion channel r 97.6 0.0028 6E-08 57.6 14.4 108 108-251 40-147 (156)
239 TIGR00805 oat sodium-independe 97.5 0.0022 4.9E-08 71.8 15.9 82 70-152 331-415 (633)
240 PF01770 Folate_carrier: Reduc 97.4 0.19 4E-06 52.9 27.8 158 88-281 22-183 (412)
241 PF06609 TRI12: Fungal trichot 97.4 0.0036 7.8E-08 68.8 15.1 154 66-252 307-464 (599)
242 PTZ00207 hypothetical protein; 97.3 0.002 4.4E-08 71.0 12.5 177 69-283 353-555 (591)
243 PRK15462 dipeptide/tripeptide 97.3 0.015 3.3E-07 62.9 18.4 160 66-252 265-437 (493)
244 PF06963 FPN1: Ferroportin1 (F 97.2 0.4 8.7E-06 51.0 28.4 194 70-278 3-198 (432)
245 PRK03612 spermidine synthase; 97.2 0.038 8.3E-07 60.4 20.8 167 80-277 25-195 (521)
246 TIGR00769 AAA ADP/ATP carrier 97.1 0.55 1.2E-05 50.6 31.5 163 67-253 5-189 (472)
247 KOG0637 Sucrose transporter an 97.1 0.00076 1.7E-08 70.4 5.5 166 69-252 32-202 (498)
248 KOG0255 Synaptic vesicle trans 97.0 0.033 7.2E-07 60.9 18.2 145 70-254 323-467 (521)
249 KOG2563 Permease of the major 97.0 0.0036 7.8E-08 65.4 9.7 186 70-286 267-456 (480)
250 KOG2615 Permease of the major 97.0 0.012 2.6E-07 60.4 13.0 152 69-254 260-413 (451)
251 KOG3762 Predicted transporter 96.9 0.061 1.3E-06 57.6 17.6 69 87-156 29-97 (618)
252 PF06779 DUF1228: Protein of u 96.7 0.023 5.1E-07 45.8 10.0 66 90-156 12-77 (85)
253 KOG4332 Predicted sugar transp 96.5 0.0025 5.5E-08 62.0 3.8 176 93-299 60-239 (454)
254 PF03137 OATP: Organic Anion T 96.2 0.0012 2.6E-08 72.3 0.0 180 70-255 306-514 (539)
255 KOG2816 Predicted transporter 96.2 0.025 5.5E-07 60.7 9.8 127 92-254 264-391 (463)
256 COG3104 PTR2 Dipeptide/tripept 95.8 0.22 4.9E-06 53.1 14.4 160 88-272 303-479 (498)
257 PF02487 CLN3: CLN3 protein; 95.7 3.3 7.2E-05 43.6 22.8 128 110-278 64-193 (402)
258 KOG3098 Uncharacterized conser 95.7 0.54 1.2E-05 50.3 17.1 118 115-249 289-408 (461)
259 PF06963 FPN1: Ferroportin1 (F 95.2 0.83 1.8E-05 48.7 16.7 135 89-250 278-413 (432)
260 KOG1330 Sugar transporter/spin 95.1 0.094 2E-06 55.3 8.9 137 97-259 275-417 (493)
261 TIGR00880 2_A_01_02 Multidrug 95.0 0.2 4.3E-06 42.9 9.6 60 437-514 80-139 (141)
262 TIGR00926 2A1704 Peptide:H+ sy 94.1 13 0.00028 42.0 24.0 254 96-412 11-274 (654)
263 KOG2325 Predicted transporter/ 93.6 0.22 4.8E-06 53.4 8.0 201 65-275 258-470 (488)
264 PF02487 CLN3: CLN3 protein; 93.4 1.3 2.9E-05 46.5 13.2 63 186-254 334-396 (402)
265 KOG3574 Acetyl-CoA transporter 92.3 3.1 6.8E-05 43.2 13.4 159 64-249 26-189 (510)
266 KOG3626 Organic anion transpor 91.8 0.47 1E-05 53.3 7.6 75 70-144 393-469 (735)
267 KOG3097 Predicted membrane pro 89.9 3.4 7.5E-05 42.0 10.9 120 64-220 24-143 (390)
268 TIGR00939 2a57 Equilibrative N 88.2 3.9 8.5E-05 43.8 10.8 155 69-248 269-427 (437)
269 TIGR00769 AAA ADP/ATP carrier 87.2 48 0.001 35.9 20.1 72 195-271 274-345 (472)
270 PF03092 BT1: BT1 family; Int 86.5 2.1 4.6E-05 45.7 7.7 133 98-257 245-382 (433)
271 PF03219 TLC: TLC ATP/ADP tran 86.1 56 0.0012 35.5 24.8 171 65-254 20-205 (491)
272 COG3202 ATP/ADP translocase [E 86.0 39 0.00084 36.5 16.4 166 65-254 23-209 (509)
273 KOG4332 Predicted sugar transp 85.4 8.7 0.00019 38.1 10.4 140 107-275 284-426 (454)
274 KOG0637 Sucrose transporter an 79.3 4.2 9E-05 43.2 6.1 91 63-154 273-380 (498)
275 TIGR00806 rfc RFC reduced fola 75.3 1.3E+02 0.0028 32.8 20.6 32 437-468 143-174 (511)
276 PF00854 PTR2: POT family; In 69.7 15 0.00033 38.1 7.6 63 439-519 67-129 (372)
277 PF01733 Nucleoside_tran: Nucl 66.6 2 4.4E-05 43.6 0.2 55 187-247 248-302 (309)
278 COG5336 Uncharacterized protei 57.8 41 0.00088 28.3 6.2 23 123-145 60-82 (116)
279 PF06813 Nodulin-like: Nodulin 57.2 54 0.0012 32.2 8.3 31 437-468 125-155 (250)
280 PF03219 TLC: TLC ATP/ADP tran 56.0 3E+02 0.0066 29.9 20.8 71 196-271 291-361 (491)
281 PF13000 Acatn: Acetyl-coenzym 53.6 3.3E+02 0.0072 29.8 13.8 57 194-256 412-468 (544)
282 TIGR00939 2a57 Equilibrative N 52.8 3.2E+02 0.0069 29.2 15.7 33 186-219 105-137 (437)
283 KOG2601 Iron transporter [Inor 52.3 3.1E+02 0.0067 29.0 19.6 28 437-464 415-442 (503)
284 PF01770 Folate_carrier: Reduc 51.9 2.3E+02 0.0051 30.0 12.4 37 107-144 287-323 (412)
285 PF06645 SPC12: Microsomal sig 51.8 57 0.0012 25.7 6.1 50 232-284 11-60 (76)
286 KOG1479 Nucleoside transporter 50.8 31 0.00068 36.3 5.7 93 106-220 283-376 (406)
287 KOG1479 Nucleoside transporter 48.1 3.6E+02 0.0078 28.5 16.8 33 187-220 117-149 (406)
288 PHA03049 IMV membrane protein; 47.9 28 0.0006 26.4 3.4 39 495-533 6-44 (68)
289 PF09527 ATPase_gene1: Putativ 43.8 1.2E+02 0.0026 21.8 6.5 32 114-145 9-40 (55)
290 PF11947 DUF3464: Protein of u 42.4 69 0.0015 28.9 5.8 31 207-243 114-144 (153)
291 KOG1237 H+/oligopeptide sympor 42.0 63 0.0014 35.9 6.8 67 184-256 455-521 (571)
292 PRK10263 DNA translocase FtsK; 41.1 2.5E+02 0.0055 34.2 11.6 18 241-258 143-160 (1355)
293 KOG2927 Membrane component of 40.2 27 0.00058 35.6 3.2 40 422-464 193-234 (372)
294 PF07672 MFS_Mycoplasma: Mycop 40.1 3.6E+02 0.0078 26.8 10.8 33 108-140 144-176 (267)
295 PF01102 Glycophorin_A: Glycop 37.5 37 0.00081 29.4 3.2 25 494-518 70-94 (122)
296 TIGR01666 YCCS hypothetical me 37.2 3.9E+02 0.0084 30.6 12.1 28 129-156 50-77 (704)
297 COG2233 UraA Xanthine/uracil p 35.1 3.6E+02 0.0079 28.9 10.7 121 70-220 17-138 (451)
298 TIGR01667 YCCS_YHJK integral m 34.7 2.5E+02 0.0054 32.1 10.2 28 129-156 50-77 (701)
299 KOG4112 Signal peptidase subun 32.4 1.9E+02 0.004 23.7 6.1 32 227-259 21-52 (101)
300 PF07857 DUF1632: CEO family ( 30.5 2.9E+02 0.0063 27.2 8.6 29 437-465 72-100 (254)
301 PF12273 RCR: Chitin synthesis 29.7 25 0.00054 30.7 1.0 18 259-276 1-18 (130)
302 COG1230 CzcD Co/Zn/Cd efflux s 29.2 6.1E+02 0.013 25.6 13.6 56 87-148 42-99 (296)
303 COG4262 Predicted spermidine s 27.6 7.3E+02 0.016 26.0 14.6 91 99-214 37-132 (508)
304 PRK10692 hypothetical protein; 26.5 1.1E+02 0.0023 24.7 3.8 23 134-156 2-24 (92)
305 PF06912 DUF1275: Protein of u 26.0 5.5E+02 0.012 24.0 19.0 32 236-268 169-200 (209)
306 KOG4830 Predicted sugar transp 25.7 1.1E+02 0.0024 30.5 4.5 61 78-140 26-95 (412)
307 PF05961 Chordopox_A13L: Chord 25.5 1.3E+02 0.0027 23.0 3.8 24 495-518 6-29 (68)
308 COG5336 Uncharacterized protei 24.7 3.4E+02 0.0074 22.9 6.6 35 437-471 35-69 (116)
309 PHA02650 hypothetical protein; 24.5 1.4E+02 0.0031 23.5 4.1 32 491-522 47-78 (81)
310 TIGR02230 ATPase_gene1 F0F1-AT 23.6 2.8E+02 0.0061 23.1 6.0 16 122-137 59-74 (100)
311 COG4232 Thiol:disulfide interc 22.9 1.1E+03 0.023 26.3 11.9 34 187-220 325-358 (569)
312 PHA02844 putative transmembran 22.8 1.5E+02 0.0033 23.1 3.9 28 491-518 46-73 (75)
313 KOG3574 Acetyl-CoA transporter 21.7 4.9E+02 0.011 27.7 8.5 59 195-259 377-435 (510)
314 PF10762 DUF2583: Protein of u 21.5 1.3E+02 0.0027 24.1 3.3 23 134-156 2-24 (89)
315 KOG3810 Micronutrient transpor 20.1 1E+03 0.022 25.0 11.0 86 108-220 274-359 (433)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=387.72 Aligned_cols=460 Identities=45% Similarity=0.744 Sum_probs=406.0
Q ss_pred CCccccCCCCCcccc---cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHH
Q 009195 49 TTPVNVHGKPIADLS---KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLG 125 (540)
Q Consensus 49 ~~~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 125 (540)
.+..+++++|. .+. .++.|+.+..++..+.++++++|++..++..|++..+|.+...+...++.|.+.....++++
T Consensus 15 ~~~~d~~~~~~-~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g 93 (571)
T KOG1237|consen 15 FTSVDYRGPLL-GSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLG 93 (571)
T ss_pred cceeeccCCcc-cccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHH
Confidence 35566666666 554 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccc
Q 009195 126 GFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIR 205 (540)
Q Consensus 126 G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~ 205 (540)
++++|.|+||++++.++.+++.+|..++.+++..+.+.|. .| ..+.....|+.+.+.....++.++.+.++|.|+..
T Consensus 94 ~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~--~~-~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r 170 (571)
T KOG1237|consen 94 AFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPF--MC-KFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIR 170 (571)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--cc-cCCCCCCcccCcchHHHHHHHHHHHHheeccCCCC
Confidence 9999999999999999999999999999999888888875 33 00012336889999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcccccc
Q 009195 206 PCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRH 285 (540)
Q Consensus 206 ~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~ 285 (540)
++..++.+|||++..+.++..+.++|+|+|+..++|.+++..+..|++++.||.++|.++.+++++++++++...+.+++
T Consensus 171 ~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~ 250 (571)
T KOG1237|consen 171 PCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRY 250 (571)
T ss_pred CcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEe
Confidence 99999999999987777777788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCchhhHHHhhhhccc---cCCCCCCc
Q 009195 286 RLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKED---VINPSPWK 362 (540)
Q Consensus 286 ~~~~~~~~~~~~~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~ 362 (540)
.++.++++.++.+|++.+.++++...+.++.. + +.........++.++++++|+++.+..++ ....+||+
T Consensus 251 ~~p~gsp~t~i~~Vlvaa~~k~~~~~~~~~~~-~------~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~ 323 (571)
T KOG1237|consen 251 KKPRGSPKTRIGQVLVAAAFKRKAVVSLDPEE-L------YYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWR 323 (571)
T ss_pred eCCCCCchhHHHHHHHHHHHHHhccCCCcchh-c------cccccccccccCCcccchhhHhhccCCcccccccccCCcc
Confidence 99999999999999999999999888876544 3 11122223334466788999988776542 34578999
Q ss_pred ccchhhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHhhhcccc--------------------------------
Q 009195 363 LCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHM-------------------------------- 410 (540)
Q Consensus 363 ~~~~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-------------------------------- 410 (540)
.|+.+++|++|+++|.+|+|...++++..+.|+.+.++.|+.+||+++
T Consensus 324 lct~~~Vee~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP 403 (571)
T KOG1237|consen 324 LCTVTQVEEVKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVP 403 (571)
T ss_pred CCCceehhhhhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehh
Confidence 999999999999999999999999999999999999999999999876
Q ss_pred ------CCCCCCChhHHHHHHHHHHHHHHHHh------------------------------------------------
Q 009195 411 ------GHPRGASQLQRVGIGLAVSILSVIWA------------------------------------------------ 436 (540)
Q Consensus 411 ------~~~~~~~~~~~~~~g~~~~~~~~~~~------------------------------------------------ 436 (540)
+++.+++.++++++|+++.++++..+
T Consensus 404 ~~~~~t~~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFf 483 (571)
T KOG1237|consen 404 FARKLTGNPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFF 483 (571)
T ss_pred hhhhhcCCCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHh
Confidence 22346789999999999999997776
Q ss_pred ---ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCccc-CCCcCcchhHHHHHHHHHHHHHHHHHHhh
Q 009195 437 ---APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLA-QNINTGRFDYLYWLLAVLSVINFCAFLYS 512 (540)
Q Consensus 437 ---~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~a~~~~~~~i~~~~~ 512 (540)
+|++||+.+++++.+..++|++++..++..+...++ . ..+|++ +|+|.++++++||++++...++.+.+.++
T Consensus 484 Y~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~--~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~ 559 (571)
T KOG1237|consen 484 YSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTG--K--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLIC 559 (571)
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEE
Confidence 999999999999999999999999999999988775 3 568998 99999999999999999999999999999
Q ss_pred hhccccccccc
Q 009195 513 AYRYKYRSEQK 523 (540)
Q Consensus 513 ~~~~~~~~~~~ 523 (540)
.++|+++..++
T Consensus 560 ~~~y~~~~~~~ 570 (571)
T KOG1237|consen 560 AKRYDYKDDKD 570 (571)
T ss_pred EEeeeeccccC
Confidence 99999986654
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.97 E-value=3.7e-30 Score=266.08 Aligned_cols=386 Identities=18% Similarity=0.243 Sum_probs=292.1
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHH
Q 009195 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH----KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT 138 (540)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg----~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~ 138 (540)
...+++|.++.++..++.|+++||++...+..|+..+++ ++++++.-..+.|..-.++.+++|||++||++|+|++
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t 94 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT 94 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 445688999999999999999999999999999999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 009195 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (540)
Q Consensus 139 i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (540)
+..+.+++.+|.+.++.+.. .....++++..++++|.|.+.+++..+++|++|+
T Consensus 95 I~lGail~~iGh~~L~~~~~--------------------------~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~ 148 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSV--------------------------SGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK 148 (498)
T ss_pred HHHHHHHHHHHHHHHhcccc--------------------------ccccHHHHHHHHHHhccccccccHHHHHHHhcCC
Confidence 99999999999999987520 1356788999999999999999999999999999
Q ss_pred CCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcccccccCC--CCCchhH-
Q 009195 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP--GGSPLTR- 295 (540)
Q Consensus 219 ~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 295 (540)
++++ |..+++++|++.|+|+.++|++.+++.+++||..+|.++++.+.++++.++++++.+..... ..+++..
T Consensus 149 ~Dpr----rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~ 224 (498)
T COG3104 149 DDPR----RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFN 224 (498)
T ss_pred CCcc----cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhh
Confidence 9876 99999999999999999999999999999999999999999999999999999887765532 2122111
Q ss_pred -----HHHHHHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCchh-hHH----HhhhhccccCCCCCCcccc
Q 009195 296 -----VAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRC-LDK----AALELKEDVINPSPWKLCT 365 (540)
Q Consensus 296 -----~~~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-l~~----~~~~~~~~~~~~~~~~~~~ 365 (540)
...++...... + ..+ +.. .+..+. +.. .+..+-.+ .-.| .
T Consensus 225 ~~~~~~~~~~~~~~~~-----~--~~~-~l~----------------~~~~~~~~~~~~i~~~~~~~~~---~~~~---~ 274 (498)
T COG3104 225 FLLPVLGGLVVMILAA-----L--LTL-LLN----------------QNTFSGVLLVISILIAIIYFAE---AFRS---P 274 (498)
T ss_pred hhhhhHHHHHHHHHHH-----H--HHH-HHH----------------HHHHHHHHHHHHHHHHHHHHHH---Hhcc---C
Confidence 11111111100 0 000 000 000000 000 00000000 0011 1
Q ss_pred hhhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHhhh-ccc-----c----------------------------C
Q 009195 366 VTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTM-NTH-----M----------------------------G 411 (540)
Q Consensus 366 ~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~-----~----------------------------~ 411 (540)
+.. +++|+++..+++++...+||..+.|+++.+..++..+ +++ + +
T Consensus 275 ~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~ 353 (498)
T COG3104 275 KVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGR 353 (498)
T ss_pred ccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhc
Confidence 223 6789999999999999999999999999888776543 343 1 2
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh--------------------------------------------ccchhHHHHHH
Q 009195 412 HPRGASQLQRVGIGLAVSILSVIWA--------------------------------------------APDAMKSIGSA 447 (540)
Q Consensus 412 ~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------------------------~P~~~rg~~~g 447 (540)
++..++.-.|++.|++++.++++.. +|.++.|..||
T Consensus 354 ~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma 433 (498)
T COG3104 354 GNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMA 433 (498)
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHH
Confidence 3345677778899988888887765 99999999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhccccccc
Q 009195 448 YAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSE 521 (540)
Q Consensus 448 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~~~~~~~ 521 (540)
.+.+....++.++..+.+.... ++ . -.+......+|+..+.+.++..+..+.+.++.++..+
T Consensus 434 ~wfLt~a~~~~l~g~va~~~~~-~~--~---------~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r~~~ 495 (498)
T COG3104 434 MWFLTVAAGQTLGGQVAGLTAV-TD--P---------AYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNRMMK 495 (498)
T ss_pred HHHHHHHHHHHhhceecccccc-cc--h---------hhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhc
Confidence 9999999999988888774221 11 0 0111124467888888888888888888887766543
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.97 E-value=1.6e-27 Score=257.23 Aligned_cols=380 Identities=12% Similarity=0.166 Sum_probs=267.2
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH
Q 009195 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (540)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~ 143 (540)
.+++|+.++.+++.++++++++|++..+++.|+++++|++.+++.++.+.+....++.++++|+++||++||||+++++.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999459999999999
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 009195 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (540)
Q Consensus 144 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (540)
+++.++.++++++.. ....++++|+++|+|.|...++..++++|++|+++++
T Consensus 89 ~~~~~g~~~~~~~~~---------------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~- 140 (489)
T PRK10207 89 IVLAIGYFMTGMSLL---------------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR- 140 (489)
T ss_pred HHHHHHHHHHHHhcc---------------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh-
Confidence 999999999887521 1234668899999999999999999999999987522
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccccccc--CCCCCchhHHHHHHH
Q 009195 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR--LPGGSPLTRVAQVLV 301 (540)
Q Consensus 224 ~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~ 301 (540)
|++.++++|++.|+|+.+||.+++++.++.|||+.|++..+.++++++.+...++.+++. ++++++. +..+.+.
T Consensus 141 ---~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~l 216 (489)
T PRK10207 141 ---LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPM-SFSKLLL 216 (489)
T ss_pred ---hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccch-hhhhHHH
Confidence 688999999999999999999999999999999999998776666666666655444332 2222211 1111100
Q ss_pred ---------HHHHhhccccCCcccccccccCCCcccccCCcccccCCCchh-hHHHh------hhhccccCCCCCCcccc
Q 009195 302 ---------AAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRC-LDKAA------LELKEDVINPSPWKLCT 365 (540)
Q Consensus 302 ---------~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~------~~~~~~~~~~~~~~~~~ 365 (540)
..... ..... ++ ... +.... ..... ..
T Consensus 217 ~~~~~~~~~~~~~~-~~~~~-~~-------------------------~~~~~~~~~~i~~~~f~~~~----------~~ 259 (489)
T PRK10207 217 VLLGSVVMIFVCAW-LMHNV-EV-------------------------ANLVLIVLSIVVTIIFFREA----------FK 259 (489)
T ss_pred HHHHHHHHHHHHHH-HHhhh-hH-------------------------HHHHHHHHHHHHHHHHHHHH----------hc
Confidence 00000 00000 00 000 00000 00000 00
Q ss_pred hhhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHh-hhcccc---------------------------------C
Q 009195 366 VTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAY-TMNTHM---------------------------------G 411 (540)
Q Consensus 366 ~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~---------------------------------~ 411 (540)
.++ .++++.+....+++...++|..+.|..+.+..+.. .++... +
T Consensus 260 ~~~-~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~ 338 (489)
T PRK10207 260 LDK-TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGS 338 (489)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhh
Confidence 011 23455555666677788888888887665544432 222211 3
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHh--------------------------------------------ccchhHHHHHH
Q 009195 412 HPRGASQLQRVGIGLAVSILSVIWA--------------------------------------------APDAMKSIGSA 447 (540)
Q Consensus 412 ~~~~~~~~~~~~~g~~~~~~~~~~~--------------------------------------------~P~~~rg~~~g 447 (540)
++..++...++.+|+++.+++++.+ +|++++|.++|
T Consensus 339 r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g 418 (489)
T PRK10207 339 KGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILG 418 (489)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHH
Confidence 3445677788888877776665310 99999999999
Q ss_pred HHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhccccccc
Q 009195 448 YAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSE 521 (540)
Q Consensus 448 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~~~~~~~ 521 (540)
++++...+|+.++..+....... . ...++ . ..+.++.++|..++..+++..++++++.++.++..+
T Consensus 419 ~~~l~~~ig~~lg~~l~~~~~~~-~--~~~~~-~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~ 484 (489)
T PRK10207 419 MWFLTQAAAFLLGGYVATFTAVP-D--NITDP-L----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRMIN 484 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-c--ccccc-h----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999888655320 0 00000 0 012236678888888888888888888887777643
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=6e-27 Score=252.26 Aligned_cols=375 Identities=14% Similarity=0.150 Sum_probs=264.0
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHH
Q 009195 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (540)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i 141 (540)
..++++.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++.+
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 346777899999999999999999999999999988 999999999999999999999999999999994499999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 009195 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (540)
Q Consensus 142 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (540)
+.++..++.++++++ .+...+++++++.|+|.|...++..++++|++|++++
T Consensus 85 ~~~~~~~g~~~~~~~----------------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~ 136 (475)
T TIGR00924 85 GGIVLMLGHFMLAMS----------------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM 136 (475)
T ss_pred HHHHHHHHHHHHHhc----------------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc
Confidence 999999998888764 3456677899999999999999999999999987542
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHH----
Q 009195 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVA---- 297 (540)
Q Consensus 222 ~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 297 (540)
+ .|+++++++|++.|+|+.+||.+++++.+++||++.|++.++.++++++.+.+.++.+++.++++++..+..
T Consensus 137 ~---~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (475)
T TIGR00924 137 P---RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYG 213 (475)
T ss_pred c---cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhH
Confidence 1 288899999999999999999999999999999999999887777776666666655543332222111100
Q ss_pred H---H----HHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCchhhH----HHhhhhccccCCCCCCcccch
Q 009195 298 Q---V----LVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLD----KAALELKEDVINPSPWKLCTV 366 (540)
Q Consensus 298 ~---v----~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~ 366 (540)
+ . +....+.... ... ....+.+. .....+.... ..+|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~-~~~------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~----- 262 (475)
T TIGR00924 214 KLLLALLAALALVFFCAWL-MHH------------------------VVIANILLMTVTLAVIIFFFRL-AFKPR----- 262 (475)
T ss_pred HHHHHHHHHHHHHHHHHHH-Hhc------------------------cHHHHHHHHHHHHHHHHHHHHH-HHhcc-----
Confidence 0 0 0000000000 000 00000000 0000000000 00010
Q ss_pred hhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHH-Hhhhcccc---------------------------------CC
Q 009195 367 TQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQ-AYTMNTHM---------------------------------GH 412 (540)
Q Consensus 367 ~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~---------------------------------~~ 412 (540)
.+.+++++....+++++...++|..+.|+.+.+..+ ..++|..+ ++
T Consensus 263 ~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~ 342 (475)
T TIGR00924 263 LDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK 342 (475)
T ss_pred CCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 111233445567888888899999999988865432 23334321 22
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHh-------------------------------------------ccchhHHHHHHHH
Q 009195 413 PRGASQLQRVGIGLAVSILSVIWA-------------------------------------------APDAMKSIGSAYA 449 (540)
Q Consensus 413 ~~~~~~~~~~~~g~~~~~~~~~~~-------------------------------------------~P~~~rg~~~g~~ 449 (540)
...++...|+++|+++.+++++.+ +|+++||+++|++
T Consensus 343 ~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~ 422 (475)
T TIGR00924 343 GKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMW 422 (475)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHH
Confidence 234566677888877776664331 8999999999999
Q ss_pred HHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009195 450 ALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKY 518 (540)
Q Consensus 450 ~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~~~~ 518 (540)
.+...+|+++++.+.....+..+ ...+|...+.++++..++++++.++.++
T Consensus 423 ~l~~~~g~~l~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~k 473 (475)
T TIGR00924 423 FLAQAMGSLLGGYLATFGAVPQG------------------VTGVFGKIGLVTLLVGVVMALMVPWLNR 473 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999988876544222 2456777777777777777777766554
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.96 E-value=5.9e-26 Score=242.45 Aligned_cols=396 Identities=14% Similarity=0.158 Sum_probs=265.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
+|++.++.+++.++.+++++|++..+++.|+++.+|++..+++.+.+.+....+++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 37789999999999999999999999999999999999999999999999999999999999999977999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..++.+++.... .+...++++..+.++|.|...++..++++|++|+++++
T Consensus 86 ~~lg~lll~~~~---------------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~--- 135 (493)
T PRK15462 86 MAIGHVVLGASE---------------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR--- 135 (493)
T ss_pred HHHHHHHHHHhh---------------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc---
Confidence 999887665421 11233455556667888888899999999999986432
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcccccccCC-CCCchhH--HHHHHHH
Q 009195 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRLP-GGSPLTR--VAQVLVA 302 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~v~~~ 302 (540)
|.++++++|...|+|+.++|.+++++.+++||+++|.++++.++++++.++..++.+.+... ..++.++ .......
T Consensus 136 -R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 214 (493)
T PRK15462 136 -RDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWG 214 (493)
T ss_pred -ccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHH
Confidence 99999999999999999999999999999999999999888777777776665554433211 1111110 0000000
Q ss_pred HHHhhccccCCcccccccccCCCcccccCCcccccCCCchhh-HHHh---hhhccccCCCCCCcccchhhHHHHHHHHhh
Q 009195 303 AFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCL-DKAA---LELKEDVINPSPWKLCTVTQVEEVKTLVRL 378 (540)
Q Consensus 303 ~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~k~l~~~ 378 (540)
..---. .. .+ . +... .+... ....+ -... ...-. +........+++|++...
T Consensus 215 ~~~~~~--~~-~~-~-~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~er~r~~~~ 270 (493)
T PRK15462 215 WLLVLL--VA-TP-A-LITV-----------LFWKE-WSVYALIVATIIGLGVLA-------KIYRKAENQKQRKELGLI 270 (493)
T ss_pred HHHHHH--HH-HH-H-HHHH-----------HHHHH-HHHHHHHHHHHHHHHHHH-------HHHHhcCCHHHHhhHHHH
Confidence 000000 00 00 0 0000 00000 00000 0000 00000 000001124678899999
Q ss_pred hhhhhhhHHHHHHhhhhhhHHHHHH-hhhcccc---------------------------------CCCCCCChhHHHHH
Q 009195 379 VPIPACTIMLNVILTEFLTLSVQQA-YTMNTHM---------------------------------GHPRGASQLQRVGI 424 (540)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~~---------------------------------~~~~~~~~~~~~~~ 424 (540)
+++++...+||..+.|.++.+.... .++|+++ ++++.++...|++.
T Consensus 271 ~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~ 350 (493)
T PRK15462 271 VTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFAL 350 (493)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHH
Confidence 9999999999999999998766554 3455553 23446778888999
Q ss_pred HHHHHHHHHHHh-------------------------------------------ccchhHHHHHHHHHHHh-hHHHHHH
Q 009195 425 GLAVSILSVIWA-------------------------------------------APDAMKSIGSAYAALAG-GLGCFAA 460 (540)
Q Consensus 425 g~~~~~~~~~~~-------------------------------------------~P~~~rg~~~g~~~~~~-~~~~~~~ 460 (540)
|+++.++++++. +|+++||..||++++.. .+++.++
T Consensus 351 g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 351 GLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887654 99999999999998754 6888888
Q ss_pred HHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHH--HHHHHhhhhcccccccc
Q 009195 461 SILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVIN--FCAFLYSAYRYKYRSEQ 522 (540)
Q Consensus 461 ~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~--~i~~~~~~~~~~~~~~~ 522 (540)
..+.........+|... + .+ ...++..+|...+.++++. ++.+.+..+..|.|++.
T Consensus 431 g~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (493)
T PRK15462 431 GVIADQTSQASFDASGA-I----NY-SINAYIEVFDQITWGALACVGVVLMIWLYQALKFRNRA 488 (493)
T ss_pred HHHHHHhccccCCcccc-c----cc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 77777653211100000 0 00 0113555677777666554 45555556666666543
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.96 E-value=1.7e-25 Score=242.49 Aligned_cols=388 Identities=16% Similarity=0.219 Sum_probs=263.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
++++.++.+++.++++++++|++..+++.|+++++|++.++++++.+.+.......++++|+++||++|||+++.++.++
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 56678899999999999999999999999999999999999998888888777777889999999945999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..++.++++++. .+...+++++++.|+|.|...++..++++|++|+++++
T Consensus 98 ~~ig~~l~~~~~---------------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~--- 147 (500)
T PRK09584 98 LAIGYALVAWSG---------------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR--- 147 (500)
T ss_pred HHHHHHHHHHhc---------------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh---
Confidence 999988877641 13455678889999999999999999999999876522
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccccccc--CCCCCchh--H----HH
Q 009195 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR--LPGGSPLT--R----VA 297 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~----~~ 297 (540)
|.++++++|++.++|+.++|.+++++.+++||++.|++.++..+++++.+++.++.+++. +++..+.. . ..
T Consensus 148 -~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (500)
T PRK09584 148 -LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIV 226 (500)
T ss_pred -hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHH
Confidence 567889999999999999999999999999999999998877766666555554433322 12211111 1 01
Q ss_pred HHHHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCchhhHHHhhhhccccCCCCCCc-ccchhhHHHHHHHH
Q 009195 298 QVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWK-LCTVTQVEEVKTLV 376 (540)
Q Consensus 298 ~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~k~l~ 376 (540)
.+........ + +...+ + .. + ..+-..+...... .+. .+. .+..++++++
T Consensus 227 ~~~~~~~~~~---------~-~~~~~--~--------~~-~---~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~ 276 (500)
T PRK09584 227 GVVALIAIAT---------W-LLHNQ--E--------IA-R---MALGVVALGIVVI-----FGKEAFA-MKGAARRKMI 276 (500)
T ss_pred HHHHHHHHHH---------H-HHhcc--h--------HH-H---HHHHHHHHHHHHH-----HHHHHhh-cCHHHHHHHH
Confidence 1111111000 0 00000 0 00 0 0000000000000 000 001 1223456666
Q ss_pred hhhhhhhhhHHHHHHhhhhhhHHHHHHhh-hcccc------------------------------CCCCCCChhHHHHHH
Q 009195 377 RLVPIPACTIMLNVILTEFLTLSVQQAYT-MNTHM------------------------------GHPRGASQLQRVGIG 425 (540)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~------------------------------~~~~~~~~~~~~~~g 425 (540)
..+++++...++|..+.|+++.+..++.+ ++... +.+.+.....++.+|
T Consensus 277 ~~~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G 356 (500)
T PRK09584 277 VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIG 356 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHH
Confidence 66778888889999999999987765533 32211 333345567778888
Q ss_pred HHHHHHHHHHh-------------------------------------------ccchhHHHHHHHHHHHhhHHHHHHHH
Q 009195 426 LAVSILSVIWA-------------------------------------------APDAMKSIGSAYAALAGGLGCFAASI 462 (540)
Q Consensus 426 ~~~~~~~~~~~-------------------------------------------~P~~~rg~~~g~~~~~~~~~~~~~~~ 462 (540)
+++.+++++.. +|+++||+++|++++...+++.++..
T Consensus 357 ~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~ 436 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGY 436 (500)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877776551 99999999999999999999988888
Q ss_pred HHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q 009195 463 LNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQ 522 (540)
Q Consensus 463 l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~~~~~~~~ 522 (540)
+...+.. |....... ...+.+..+|..++.++++..++++...++.++..+.
T Consensus 437 ~~~~~~~----~~~~~~~~----~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k~~~~ 488 (500)
T PRK09584 437 VANLMAV----PDNVTDPL----MSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNRMTQD 488 (500)
T ss_pred HHHHhcc----ccccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8754321 00000000 1112356788888888877777777777877776443
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.94 E-value=2.5e-24 Score=237.28 Aligned_cols=267 Identities=25% Similarity=0.455 Sum_probs=219.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009195 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (540)
Q Consensus 83 ~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~ 162 (540)
++||++.+.+..|+++.+|++.+.+..+...+....++.++++|+++|+++||++++.++.+++.+|.+++++.+.....
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999988875321110
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHH
Q 009195 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (540)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~ 242 (540)
.+ ......+++..+.++|.|++.++..++.+|++++++. ..|.++++++|+++|+|+
T Consensus 81 ~~--------------------~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGS 137 (654)
T TIGR00926 81 HP--------------------LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGS 137 (654)
T ss_pred cc--------------------hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHH
Confidence 00 2334567888999999999999999999999986432 238999999999999999
Q ss_pred HHHHHHHHHhhhcc-------chHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCCcc
Q 009195 243 IVAFTLVVYIQMEH-------GWGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSE 315 (540)
Q Consensus 243 ~i~p~i~~~l~~~~-------gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~k~~~~~~~~s~ 315 (540)
.+++++.+++.+.+ +|..+|.+++++++++++++...++.+++.++.++++.+.+++++.+.|++.....+.
T Consensus 138 lis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~- 216 (654)
T TIGR00926 138 LISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH- 216 (654)
T ss_pred HHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc-
Confidence 99999999998543 6999999999999999999998888888888888888888888888877643211110
Q ss_pred cccccccCCCcccccCCcccccCCCchhhHHHhhhhccccCCCCCCcccchhhHHHHHHHHhhhhhhhhhHHHHHHhhhh
Q 009195 316 LIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEF 395 (540)
Q Consensus 316 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~ 395 (540)
...+++|.+.... ..++++++|++++.+++++...++|..+.|+
T Consensus 217 -----------------------~~~~~ld~a~~~~-------------~~~~V~evkrll~il~l~i~~~ifw~~~~Q~ 260 (654)
T TIGR00926 217 -----------------------WPLHWLDYAKDKH-------------DIRMIRSTKRLLRVLVLFIPLPMFWALFDQQ 260 (654)
T ss_pred -----------------------cchhHHHHhcccc-------------ccchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 0123444433221 1345788999999999999999999999999
Q ss_pred hhHHHHHHhhhccc
Q 009195 396 LTLSVQQAYTMNTH 409 (540)
Q Consensus 396 ~s~~~~~~~~~~~~ 409 (540)
.+.+..|+..++.+
T Consensus 261 ~s~~~~qa~~m~~~ 274 (654)
T TIGR00926 261 GSRWTLQATRMDGD 274 (654)
T ss_pred hhHHHHHHHHhcCc
Confidence 99999998888754
No 8
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.91 E-value=1.4e-22 Score=220.14 Aligned_cols=181 Identities=14% Similarity=0.106 Sum_probs=135.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-----MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI 139 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-----lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i 139 (540)
+.+++.+..+.+..+...+....+....+ .+..+ .+.+..+.+++.+.+.++..++.+++|+++||+ |||+++
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~ 89 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTK-MLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVY 89 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHH
Confidence 34445555556666666555543333333 33332 234566778999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 009195 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (540)
Q Consensus 140 ~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (540)
.++.++..++.++++++... .+ ..+...++++|++.|++.|+..+..+.+++|.+|++
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~---~~-------------------~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~ 147 (502)
T TIGR00887 90 GMELIIMIIATVASGLSPGS---SP-------------------KSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKK 147 (502)
T ss_pred HHHHHHHHHHHHHHHHccCc---cc-------------------chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChh
Confidence 99999999988877764110 00 023678999999999999999999999999999999
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh-----------------------ccchHHHHHHHHHHHHHHHHH
Q 009195 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----------------------EHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 220 ~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~-----------------------~~gw~~~f~i~~i~~~~~~~~ 275 (540)
. |+++.++++....+|..+++.+..++.. ..+||+.|.+.++..++.++.
T Consensus 148 ~------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~ 220 (502)
T TIGR00887 148 W------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF 220 (502)
T ss_pred h------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999988888765432 237999998777665554444
No 9
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.91 E-value=1.3e-22 Score=226.40 Aligned_cols=176 Identities=14% Similarity=0.054 Sum_probs=139.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+|..+..+.+..++..+.. .+...+.+++..++|++..+.+++.+++.++.+++.+++|+++||+ |||++++++.++.
T Consensus 165 ~~~l~~i~~l~~~~~g~d~-~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~ 242 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEV-FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHH
Confidence 3433333344334333333 2344556678889999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.++++++ .+...++++|++.|++.|+..+...++++|.+|++.
T Consensus 243 ~i~~ll~afa----------------------------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------ 288 (742)
T TIGR01299 243 GFFAFFSSFV----------------------------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------ 288 (742)
T ss_pred HHHHHHHHHH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------
Confidence 9888887765 457888999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhc-------------cchHHHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQME-------------HGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~-------------~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|++.+++......+|.++++.++.++... .+||+.+++.++..++++++.++
T Consensus 289 Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 289 RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888899999998877665432 35898888877766555544333
No 10
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.7e-23 Score=218.07 Aligned_cols=338 Identities=14% Similarity=0.104 Sum_probs=236.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhH
Q 009195 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (540)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (540)
+.+++++.+|.++|+++.|+++||+ |||..+.++.++.+++.+++.++... ...
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~-------------------------~~~ 116 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA-------------------------PSF 116 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh-------------------------hhH
Confidence 6788899999999999999999998 99999999999999888888776331 467
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHH-HHhh-hccchHHHHHHH
Q 009195 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV-VYIQ-MEHGWGSAFGAL 265 (540)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~-~~l~-~~~gw~~~f~i~ 265 (540)
.++.++|++.|+..|......+.++.|..|++- ||..-.+..++.++|-.++..++ ..+. ....|++.+.+.
T Consensus 117 e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~ 190 (485)
T KOG0569|consen 117 EMLILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFP 190 (485)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHH
Confidence 899999999999999999999999999999999 99999999999999999996655 3333 445699999888
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCCcccccccc-cCCCcccccCCcccccCCCchhh
Q 009195 266 AIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYE-VPGKHSAIKGSGKIAHTDDFRCL 344 (540)
Q Consensus 266 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~k~~~~~~~~s~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l 344 (540)
.+..++.+++..+ +||||+| |+. +++.++|++.+++.+...+.+..
T Consensus 191 ~i~~~~~l~~l~~--------------------------------~PESPk~-Ll~~k~~~~~A~~sl~~y~G~~~~~~~ 237 (485)
T KOG0569|consen 191 LIPALLQLALLPF--------------------------------LPESPKY-LLIKKGDEEEARKALKFYRGKEDVEAE 237 (485)
T ss_pred HHHHHHHHHHHhc--------------------------------CCCCcch-HHHHcCCHHHHHHHHHHHhCCCcchhH
Confidence 8887777766655 6999999 776 78888888888888765432221
Q ss_pred --HHHhhhhccccC--CCCCCc-ccchhhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHhhhcccc---------
Q 009195 345 --DKAALELKEDVI--NPSPWK-LCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHM--------- 410 (540)
Q Consensus 345 --~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--------- 410 (540)
+...+.++++.+ ++..++ .+... ..++.+...+.+.+.+++.......+++.......+++...
T Consensus 238 ~e~~~~e~~~~~~~~~~~~sl~~~~~~~--~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g 315 (485)
T KOG0569|consen 238 IEEMLREIEEEELEKKKQISLRQLLKNP--TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIG 315 (485)
T ss_pred HHHHHHHHHHhccccccCCcHHHHhcCc--chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 111222222111 111211 11111 12333444555556666555444444444433322222211
Q ss_pred -------------CCCCCCChhHHH-----HHHHHHHHHH---------------------HHHh---------------
Q 009195 411 -------------GHPRGASQLQRV-----GIGLAVSILS---------------------VIWA--------------- 436 (540)
Q Consensus 411 -------------~~~~~~~~~~~~-----~~g~~~~~~~---------------------~~~~--------------- 436 (540)
.++.++.++... .+..++..++ +...
T Consensus 316 ~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aE 395 (485)
T KOG0569|consen 316 IVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAE 395 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHH
Confidence 111111122111 1111100000 0000
Q ss_pred -ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhc
Q 009195 437 -APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYR 515 (540)
Q Consensus 437 -~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~ 515 (540)
+|.+.|+.++++..+.+|+.+++....++++.+..| .++|+++++.+++..++.|...||
T Consensus 396 Lf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-------------------~~~filF~i~~~~~~i~~~~~lPE 456 (485)
T KOG0569|consen 396 LFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-------------------PYVFILFVIPLAIFLIYLYRYLPE 456 (485)
T ss_pred hCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------------------chhhHHHHHHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999998777 267888999999999999999999
Q ss_pred ccccccccCCCchhhh
Q 009195 516 YKYRSEQKHGNDYEVM 531 (540)
Q Consensus 516 ~~~~~~~~~~~~~~~~ 531 (540)
||+|+-+|+.++.+..
T Consensus 457 Tkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 457 TKGRTPYEIIEELEKR 472 (485)
T ss_pred cCCCCHHHHHHHHHhC
Confidence 9999988777666654
No 11
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.90 E-value=7e-22 Score=212.86 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=137.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------CCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--------HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI 139 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--------g~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i 139 (540)
.+.++...+..+...+....+.. ....+++.+ +.+..+.+++.+.+.++..++++++|+++||+ |||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~ 88 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISG-TVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehH-hHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHH
Confidence 34444455444444444432322 223355554 88899999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 009195 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (540)
Q Consensus 140 ~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (540)
+++.+++.++.+.++++......... +.......++++|++.|++.|+..+...++++|++|++
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~ 152 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFTSIGP----------------DNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH 152 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccccccc----------------cchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh
Confidence 99999998888777653110000000 00133567889999999999999999999999999998
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh--------hccchHHHHHHHHHHHHHHHHHH
Q 009195 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 220 ~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~--------~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
+ |++.++++..+..+|..++++++..+. +..|||+.|++.++..++..+..
T Consensus 153 ~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~ 211 (479)
T PRK10077 153 I------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL 211 (479)
T ss_pred h------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH
Confidence 8 999999999999999999887765543 35689999998777665554443
No 12
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=8.1e-22 Score=214.67 Aligned_cols=339 Identities=14% Similarity=0.146 Sum_probs=227.0
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccch
Q 009195 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (540)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (540)
+.+++.+...++..++.++.|+++|++ |||++++++.+++.+|.++++.+ .
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a----------------------------~ 140 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA----------------------------P 140 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh----------------------------h
Confidence 448999999999999999999999997 99999999999999999999987 6
Q ss_pred hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc-cchHHHHHH
Q 009195 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGA 264 (540)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~-~gw~~~f~i 264 (540)
+..+++++|++.|+|.|+.....+.+++|..|++. |+...+.+++..++|..++..++....+. .+||..+++
T Consensus 141 ~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~ 214 (513)
T KOG0254|consen 141 SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGL 214 (513)
T ss_pred hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHH
Confidence 78999999999999999999999999999999999 99999999999999999995555444332 489988888
Q ss_pred HHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCc---
Q 009195 265 LAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDF--- 341 (540)
Q Consensus 265 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~--- 341 (540)
..+..++..+.+++ +||+|+| +.++++.+++++.+.++....+.
T Consensus 215 ~~i~~~~~~~~~~~--------------------------------~pesp~~-L~~~g~~~~a~~~l~~l~g~~~~~~~ 261 (513)
T KOG0254|consen 215 ALIPAVILALGMLF--------------------------------LPESPRW-LIEKGRLEEAKRSLKRLRGLSPEDVE 261 (513)
T ss_pred HHHHHHHHHHHHHh--------------------------------CCCChHH-HHHcCChHHHHHHHHHHhCCCCcchH
Confidence 77776666555333 5788888 77777777666666665542111
Q ss_pred hhhHHHhhhhcccc---CCCCCCcccchhhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHhhhccc-c-------
Q 009195 342 RCLDKAALELKEDV---INPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTH-M------- 410 (540)
Q Consensus 342 ~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~------- 410 (540)
..++..+.....+. ..+..|..+.. ....|++...+.+..+++........+++..+.+..+.+.. .
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~ 339 (513)
T KOG0254|consen 262 VELELLKIKLLVEAEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILG 339 (513)
T ss_pred HHHHHHHHHHHHhhhcccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHH
Confidence 11111111110000 01111222221 12344555555666666654444444444333333322211 0
Q ss_pred ---------------CCCCC---CChhHHHHHHHHHHHHHHHH---------------------------h---------
Q 009195 411 ---------------GHPRG---ASQLQRVGIGLAVSILSVIW---------------------------A--------- 436 (540)
Q Consensus 411 ---------------~~~~~---~~~~~~~~~g~~~~~~~~~~---------------------------~--------- 436 (540)
+.+++ ......+.+++++.+..... .
T Consensus 340 ~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~ 419 (513)
T KOG0254|consen 340 VVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVI 419 (513)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhh
Confidence 11111 11111122222211111000 0
Q ss_pred ----ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHH-HHHh
Q 009195 437 ----APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFC-AFLY 511 (540)
Q Consensus 437 ----~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i-~~~~ 511 (540)
+|.+.|+++.++....+|+.+++.......+....+ ....|+++++++.+..+ ++++
T Consensus 420 ~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~------------------~~~~f~~f~~~~~~~~~~fv~~ 481 (513)
T KOG0254|consen 420 VSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG------------------IGGTFGYFGGICLLSLIIFVFF 481 (513)
T ss_pred hhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------ccchHHHHHHHHHHHHHHHheE
Confidence 999999999999999999999999888777654211 12456666777777777 8899
Q ss_pred hhhcccccccccCCCchhhhh
Q 009195 512 SAYRYKYRSEQKHGNDYEVME 532 (540)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~ 532 (540)
+.+|+|+++.||+++.++...
T Consensus 482 ~~pETkg~sleei~~~~~~~~ 502 (513)
T KOG0254|consen 482 FVPETKGLTLEEINELFEEGI 502 (513)
T ss_pred EcccCCCCcHHHHHHHHHcCC
Confidence 999999999998877665543
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.88 E-value=7.7e-20 Score=194.98 Aligned_cols=167 Identities=11% Similarity=0.037 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+..++..++..+..+.+...++ .+.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~ 101 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMP-EMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGII 101 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHH
Confidence 444445555555555555555554 44567999999999999999999999999999999998 9999999999999988
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++..+ .+...+++.|++.|++.|...+....++.|++|+++ |++
T Consensus 102 ~~~~~~~----------------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~ 147 (434)
T PRK11663 102 NILFGFS----------------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGG 147 (434)
T ss_pred HHHHHHH----------------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHH
Confidence 8877765 467788888999999999888999999999999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~ 272 (540)
.+++++.+.++|..++|.+.+++.+.+|||+.|++.++..++.
T Consensus 148 ~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 148 WWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998877655443
No 14
>PRK03545 putative arabinose transporter; Provisional
Probab=99.88 E-value=9.3e-20 Score=191.40 Aligned_cols=176 Identities=13% Similarity=0.109 Sum_probs=147.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
++|..++.+.+..++.....|...+ +...+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+++.++.++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 83 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVG-LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVL 83 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHc-chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 3455566666666665444443323 34567889999999999999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..++.+.+.++ .+...++++|++.|++.+...+...+++.|++|+++
T Consensus 84 ~~~~~~~~~~~----------------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~----- 130 (390)
T PRK03545 84 FIASHVLSALA----------------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK----- 130 (390)
T ss_pred HHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh-----
Confidence 99998888775 467889999999999999888999999999999888
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
|++.++++..+.++|..++|.+++.+.+..|||+.|++.++..++..+..+
T Consensus 131 -r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 131 -KAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred -hhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999889999999988776655544433
No 15
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.87 E-value=3.5e-19 Score=187.34 Aligned_cols=177 Identities=10% Similarity=-0.049 Sum_probs=148.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
.++.+..+.+..++..++.....+.++.|+++++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 344677788888888888877888889999999999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.+.+.++...... +. .+...+++.|++.|++.+...+....++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~~~~~-~~-------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------ 145 (399)
T PRK05122 92 ALSGLLYLLAGLLAAW-PV-------------------LSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------ 145 (399)
T ss_pred HHHHHHHHHhhhhhcc-ch-------------------hHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------
Confidence 8876666554210000 00 245678899999999999999999999999999888
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMG 270 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~ 270 (540)
|++.++++..+.++|..+++.+++++.+..||++.+++..+..+
T Consensus 146 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 146 TGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred hccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 99999998888999999999999999999999998876655443
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.86 E-value=2.7e-19 Score=188.53 Aligned_cols=176 Identities=17% Similarity=0.169 Sum_probs=150.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+++|..+...++..++..+..+...... +.+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAA-PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 4667777777778888888776655554 456678999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++.++ .+...+++.|++.|++.+...+...++++|.+|+++
T Consensus 89 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 136 (406)
T PRK11551 89 LFGLFSLATAQA----------------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL---- 136 (406)
T ss_pred HHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH----
Confidence 888887776664 457788899999999999999999999999999888
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
|++.+++++...++|+.+++.+++.+.+..+|++.|++.+++.++..++.
T Consensus 137 --r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK11551 137 --RGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLL 186 (406)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888888899999988776555444433
No 17
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.86 E-value=1.9e-20 Score=199.77 Aligned_cols=152 Identities=18% Similarity=0.276 Sum_probs=127.4
Q ss_pred HHHHHhhCCC--------hHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 009195 94 TFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (540)
Q Consensus 94 ~yl~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~ 165 (540)
..+..+++.+ ..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.+++.+... .
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~------~ 124 (481)
T TIGR00879 52 ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF------A 124 (481)
T ss_pred hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc------c
Confidence 3445555555 88999999999999999999999999998 9999999999999998888865421 0
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHH
Q 009195 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (540)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~ 245 (540)
.+...++++|++.|++.+...+...++++|.+|+++ |++.+++++...++|..++
T Consensus 125 -------------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~ 179 (481)
T TIGR00879 125 -------------------LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVA 179 (481)
T ss_pred -------------------cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHH
Confidence 245678899999999999999999999999999988 9999999999999999999
Q ss_pred HHHH---HHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 246 FTLV---VYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 246 p~i~---~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
+.++ ..+....+||+.|++.++..++.++..+
T Consensus 180 ~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 214 (481)
T TIGR00879 180 YGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLF 214 (481)
T ss_pred HHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 9998 6666778999999986665555444433
No 18
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.86 E-value=3.1e-19 Score=189.17 Aligned_cols=172 Identities=19% Similarity=0.163 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~ 153 (540)
++...++..++.......++.+. ++++.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 22 VFIARFISIFGLGLLGVAVPVQI-QMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHHHHH
Confidence 34445555555544444455554 56788999999999999999999999999999998 99999999888777776665
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHH
Q 009195 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (540)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~ 233 (540)
...... .. .+...+++.|++.|++.+...+...+++.|.+|+++ |++..++
T Consensus 100 ~~~~~~----~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 150 (417)
T PRK10489 100 ALNAFL----PE-------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAI 150 (417)
T ss_pred HHHHHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHH
Confidence 432110 11 346677888999999988888888899999999887 9999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 234 ~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
.+...++|..+||.+++++.+..+|++.|++.++..+++.++.
T Consensus 151 ~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 151 TMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888899999988776665554443
No 19
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1.4e-18 Score=178.37 Aligned_cols=183 Identities=13% Similarity=0.137 Sum_probs=165.4
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHH
Q 009195 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (540)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~ 142 (540)
..+..|..++.+.+..|.....-+....- .+.+.+++|.+..++++.++.|..+..++.|+...+.||+ .||++++..
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gL-Lp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~ 84 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGL-LPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGL 84 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhc-hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHH
Confidence 34555668888888888888888765554 4567889999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 009195 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (540)
Q Consensus 143 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (540)
+++++++.++++++ .|+..++++|++.|+..|.+.+...+..+++.|+++
T Consensus 85 l~lFi~~n~l~alA----------------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~-- 134 (394)
T COG2814 85 LALFIVSNLLSALA----------------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK-- 134 (394)
T ss_pred HHHHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc--
Confidence 99999999999998 679999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 223 ~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
|++++++...+..+...+|..++.++-+.+|||+.|++.+++.+++++..+...|
T Consensus 135 ----~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 135 ----RGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred ----hhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999988888877777666555
No 20
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.86 E-value=1.1e-18 Score=189.16 Aligned_cols=175 Identities=18% Similarity=0.133 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH-HHH-----HHHHHHHHHHHHHhHHHHHhhhccchHHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-SSN-----AVNNFLGISQASSVLGGFLADAYLGRYWTIAI 141 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~-~~~-----~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i 141 (540)
++.++...+..+++.+.+. +..+...++.++++.+... ..+ +.++..++..++.+++|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFG-VYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 4455666677777777775 4455566888887643211 111 24667788999999999999998 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 009195 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (540)
Q Consensus 142 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (540)
+.+++.++.++++++.++..+-. ....+++++|+++|++.|+..+...++++|.+|++.
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~g~--------------------~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~- 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATIGI--------------------WAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK- 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHHHH--------------------HHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC-
Confidence 99999999999887621000000 011247899999999999999999999999999998
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh--------hccchHHHHHHHHHHHH
Q 009195 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMG 270 (540)
Q Consensus 222 ~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~--------~~~gw~~~f~i~~i~~~ 270 (540)
|+...++...+..+|..+++.+...+. .++|||+.|++.++..+
T Consensus 152 -----Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l 203 (490)
T PRK10642 152 -----RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGI 203 (490)
T ss_pred -----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHH
Confidence 999999988777888877776654432 25799999998665443
No 21
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.85 E-value=8.9e-19 Score=185.57 Aligned_cols=178 Identities=15% Similarity=0.084 Sum_probs=150.9
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+.+|+....+++..++..+....+.. ....+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHH
Confidence 34676777777766776776655544 44589999999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
++.++.++++++ .+...++++|++.|++.++..+....+++|.+|+++
T Consensus 82 ~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~---- 129 (412)
T TIGR02332 82 LWGIASTATMFA----------------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF---- 129 (412)
T ss_pred HHHHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH----
Confidence 999999888876 457789999999999999999988899999999888
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhh------ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM------EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~------~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|++.+++++.+..+|..+++.+++++.+ ..|||+.|++.++..++..++.++
T Consensus 130 --rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~ 187 (412)
T TIGR02332 130 --RARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWF 187 (412)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998864 368999999877766554444433
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.85 E-value=9.4e-19 Score=184.20 Aligned_cols=150 Identities=12% Similarity=0.107 Sum_probs=130.1
Q ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 009195 86 FGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (540)
Q Consensus 86 ~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~ 165 (540)
+.+.+. .+.+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+++.++.++++++
T Consensus 26 ~~~~~~-lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a--------- 94 (393)
T PRK09705 26 TSVGPL-LPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY--------- 94 (393)
T ss_pred hccchh-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC---------
Confidence 444444 4567789999999999999999999999999999999998 99999999999999999999886
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHH
Q 009195 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (540)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~ 245 (540)
.+...++++|++.|++.+...+....++.|.+| ++ |++.++++..+.++|..++
T Consensus 95 -------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g 148 (393)
T PRK09705 95 -------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLG 148 (393)
T ss_pred -------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHH
Confidence 457788899999999999999999999999987 66 8999999999999999999
Q ss_pred HHHHHHhhhcc-chHHHHHHHHHHHHHH
Q 009195 246 FTLVVYIQMEH-GWGSAFGALAIAMGIS 272 (540)
Q Consensus 246 p~i~~~l~~~~-gw~~~f~i~~i~~~~~ 272 (540)
+.+++++.++. +||+.+.+.++..++.
T Consensus 149 ~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 149 AAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999988775 7998876655444333
No 23
>PRK12382 putative transporter; Provisional
Probab=99.85 E-value=1.3e-18 Score=182.66 Aligned_cols=172 Identities=13% Similarity=0.034 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++.+.+..++..++.....+.++.|+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLA 94 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHH
Confidence 455566666677777766777888899999999999999999999999999999999999998 9999999998877766
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+........+.. . ..+...++++|++.|++.+...+...+++.|.+|+++ |++
T Consensus 95 ~~~~~~~~~~~~~-~-------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 148 (392)
T PRK12382 95 GLAYLLAAILPVS-A-------------------PFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGK 148 (392)
T ss_pred HHHHHhhhccccc-h-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cch
Confidence 5443332110000 0 0357788999999999999888888889999999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
+++++..+.++|..++|.+++++.+..||++.+.+..+.
T Consensus 149 a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 149 VMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVL 187 (392)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 999999999999999999999998888999876655443
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.85 E-value=1.2e-18 Score=180.74 Aligned_cols=154 Identities=19% Similarity=0.180 Sum_probs=136.7
Q ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 009195 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (540)
Q Consensus 90 ~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 169 (540)
....+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~------------- 79 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA------------- 79 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH-------------
Confidence 3445568889999999999999999999999999999999998 99999999999988888888775
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 009195 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (540)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~ 249 (540)
.+...++++|++.|++.+...+....++.|.+|+++ |++.+++++...++|..++|.++
T Consensus 80 ---------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~ 138 (399)
T TIGR00893 80 ---------------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLV 138 (399)
T ss_pred ---------------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHH
Confidence 457889999999999999999999999999999888 99999999999999999999999
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 250 VYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 250 ~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+++.+..+|++.|++.++..++..++.+.
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 139 GWILIHFSWQWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHhhh
Confidence 99999899999998877766555554443
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.84 E-value=1.6e-18 Score=180.82 Aligned_cols=155 Identities=13% Similarity=0.104 Sum_probs=124.4
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 009195 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (540)
Q Consensus 88 ~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~ 167 (540)
......+.+++++|++..+.+++.+.+.+++.++.++.|+++||+ |||+++..+.+....+.+.....
T Consensus 9 ~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~----------- 76 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDP----------- 76 (368)
T ss_pred HHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHh-----------
Confidence 334455677889999999999999999999999999999999998 99998776655554443222211
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 009195 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (540)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~ 247 (540)
.+...++++|++.|++.+.. ......++|.+|+++ |++.+++.+.+..+|..+++.
T Consensus 77 -----------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~ 132 (368)
T TIGR00903 77 -----------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALA 132 (368)
T ss_pred -----------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 35778999999999999864 455566699999888 999999999999999999999
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 248 i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+++++.++.|||+.|.+.+++.++..++++.
T Consensus 133 ~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 133 AGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998866665555444443
No 26
>PRK10054 putative transporter; Provisional
Probab=99.84 E-value=1.7e-18 Score=182.48 Aligned_cols=174 Identities=15% Similarity=0.135 Sum_probs=150.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
.|..+.+....++..++.+.+.++++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHH
Confidence 44677788888999999999999999999999999999999999999999999999999999997 99999999998888
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++.+++.+. .+...+++++.+.|.+.+...+...++.+|.+|+++ |
T Consensus 85 ~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 130 (395)
T PRK10054 85 SGFIAIPLV----------------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------K 130 (395)
T ss_pred HHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------H
Confidence 887777665 356667777888888877778888999999999887 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
++.+++.+...++|..++|.+++++.+ .+|+..|++.+++.++.+++..
T Consensus 131 ~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 131 TKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875 6899999987777666544433
No 27
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.84 E-value=2.2e-18 Score=181.90 Aligned_cols=168 Identities=15% Similarity=0.210 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
+.++...++..++.+.+.++++.|+++++|++..+.+++.+...+...+..+++|+++||+ |||+++.++.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 6677888889999999999999999999999999999999999999999999999999998 999999999999999888
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
++... .+.+.++++|++.|++.+...+...+++.|.+|+++ |++++
T Consensus 92 ~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~ 137 (400)
T PRK11646 92 TMAIA----------------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFF 137 (400)
T ss_pred HHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHH
Confidence 87764 356778889999999998888889999999999887 99999
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
++.+...++|..+||.+++++. .+||++.|++.++..++..++
T Consensus 138 ~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 138 SLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 679999999877665554443
No 28
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.84 E-value=1.4e-18 Score=186.26 Aligned_cols=155 Identities=11% Similarity=0.071 Sum_probs=123.8
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 009195 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (540)
Q Consensus 91 ~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
...+++.++ |++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.++++++.. ..
T Consensus 50 ~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~-----~~----- 117 (452)
T PRK11273 50 LAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPW-----AT----- 117 (452)
T ss_pred HhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhc-----cc-----
Confidence 345577777 99999999999999999999999999999998 9999999999998888887766411 00
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHH-HHHHHH
Q 009195 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI-VAFTLV 249 (540)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~-i~p~i~ 249 (540)
.+...+++.|++.|++.+...+.....+.|++|+++ |++++++++.+.++|+. ++|+++
T Consensus 118 --------------~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~ 177 (452)
T PRK11273 118 --------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFL 177 (452)
T ss_pred --------------ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHH
Confidence 246677888999999999888888888999999888 99999999999998864 455544
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 250 VYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 250 ~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
..+....+||+.|++.++..++..++.+
T Consensus 178 ~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 178 LGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 3443445899999987766555444333
No 29
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.84 E-value=1.9e-18 Score=180.93 Aligned_cols=175 Identities=13% Similarity=0.197 Sum_probs=150.8
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHH
Q 009195 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (540)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~ 142 (540)
..+.+|+......+..++..+..+.+... ...+++++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~ 83 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALV-LAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTS 83 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHH
Confidence 45677888888888888888888665554 4567789999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 009195 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (540)
Q Consensus 143 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (540)
.++..++.+++.++ .+...++++|++.|++.+...+...+++.|.+|+++
T Consensus 84 ~~~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~-- 133 (405)
T TIGR00891 84 IVLFSAGTLACGFA----------------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL-- 133 (405)
T ss_pred HHHHHHHHHHHHHh----------------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh--
Confidence 99888888877765 457788899999999999999999999999999988
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc--hHHHHHHHHHHHHHHH
Q 009195 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISN 273 (540)
Q Consensus 223 ~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g--w~~~f~i~~i~~~~~~ 273 (540)
|++..++++.+..+|..+++.+++.+.+..+ ||+.|++.++..++.+
T Consensus 134 ----~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 134 ----RNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999887766 9999987655544443
No 30
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.84 E-value=4.4e-18 Score=179.62 Aligned_cols=172 Identities=13% Similarity=0.088 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
...+.+..++..++...+.+.++ .+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||++++++.++..++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~ 92 (406)
T PRK15402 15 PLCLVLFEFATYIANDMIQPGML-AVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTC 92 (406)
T ss_pred HHHHHHHHHHHHhhhhhHhcchH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHH
Confidence 33333444444444444444444 46678999999999999999999999999999999998 99999999998888888
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+++..+ .+...+++.|++.|++.+...+...+++.|.+|+++ |.+.
T Consensus 93 ~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~ 138 (406)
T PRK15402 93 LAILLA----------------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKI 138 (406)
T ss_pred HHHHHH----------------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHH
Confidence 777665 356778889999999999888888999999999887 8888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
.++.+....++..++|.+++++.++.+|++.|++.++..++..+..+.
T Consensus 139 ~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 139 TALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 888877788899999999999988889999998877776665554443
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.83 E-value=1.1e-18 Score=185.15 Aligned_cols=168 Identities=16% Similarity=0.185 Sum_probs=144.4
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+.+++......+..+...+..+.. .++..++++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHH
Confidence 344555666666666666666444 4555678889999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.++++++ .+...++++|++.|++.+...+....++.|.+|+++
T Consensus 92 ~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~---- 139 (426)
T PRK12307 92 AYSVGTGLSGLA----------------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL---- 139 (426)
T ss_pred HHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH----
Confidence 999998888776 467889999999999999999999999999999988
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
|++..++++.+..+|..+++.+.+++.+..+||+.|++..+.
T Consensus 140 --r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 140 --KSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred --hhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 999999999999999999999999998889999999875443
No 32
>PRK10504 putative transporter; Provisional
Probab=99.83 E-value=8.8e-18 Score=180.80 Aligned_cols=178 Identities=12% Similarity=0.036 Sum_probs=151.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
.+.++.+.+..++..+..+.+.+.++.+.+ ++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 446777888888888888888777776664 6999999999999999999999999999999998 99999999988888
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++.+.+.++ .+...++++|++.|++.++..+...+++.|.+|++. |
T Consensus 87 ~~~~~~~~~----------------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~ 132 (471)
T PRK10504 87 LGSLFCALS----------------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------Y 132 (471)
T ss_pred HHHHHHHHh----------------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------H
Confidence 888776654 356778899999999999999999999999999877 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
++.+++++...++|..++|.+++++.++.||++.|++......+..++.....+
T Consensus 133 ~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 133 MAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999877666555554444433
No 33
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.83 E-value=1.8e-17 Score=174.55 Aligned_cols=177 Identities=14% Similarity=0.124 Sum_probs=151.5
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Q 009195 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
+..+|..|+....+.+..++.....|.....++. +.+++|+++++.++..+.+.++..++.++.|+++||+ |||++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~ 89 (394)
T PRK10213 12 DAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVI 89 (394)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHH
Confidence 3455667877777776666666666665555544 5678999999999999999999999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 141 i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
++.++..++.+++..+ .+.+.+++.|++.|++.+...+...+++.|.+|+++
T Consensus 90 ~~~~~~~~~~~~~~~~----------------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~ 141 (394)
T PRK10213 90 LFAVLLTLSCLLVSFA----------------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT 141 (394)
T ss_pred HHHHHHHHHHHHHHHH----------------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH
Confidence 9999999988887765 468889999999999999999999999999999888
Q ss_pred chhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (540)
Q Consensus 221 ~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~ 273 (540)
|+++.++...+.++|..++|.+++++.+..|||+.|++.++..++..
T Consensus 142 ------~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 142 ------VPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988766554443
No 34
>TIGR00898 2A0119 cation transport protein.
Probab=99.83 E-value=2.6e-19 Score=194.46 Aligned_cols=146 Identities=12% Similarity=0.103 Sum_probs=127.5
Q ss_pred HHHHHhhCCC---hHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 009195 94 TFMFYVMHKS---FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (540)
Q Consensus 94 ~yl~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
..+.++++++ ..+.+++.+++.++..++.++.|+++||+ |||++++++.++..++.++++++
T Consensus 113 ~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~-------------- 177 (505)
T TIGR00898 113 STIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS-------------- 177 (505)
T ss_pred ccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc--------------
Confidence 3466789998 88999999999999999999999999997 99999999999998888887765
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Q 009195 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (540)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~ 250 (540)
.+...++++|++.|++.++..+....++.|.+|++. |+...+++..+..+|..+++.++.
T Consensus 178 --------------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 237 (505)
T TIGR00898 178 --------------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAY 237 (505)
T ss_pred --------------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999999999999999988 999999998888999999998876
Q ss_pred HhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 251 YIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 251 ~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
.+.+ ||+.|++.++..++..+..+
T Consensus 238 ~~~~---wr~~~~~~~i~~~~~~~~~~ 261 (505)
T TIGR00898 238 FIPD---WRWLQLAVSLPTFLFFLLSW 261 (505)
T ss_pred HhhH---HHHHHHHHHHHHHHHHHHHH
Confidence 6654 99999888777665555443
No 35
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.83 E-value=1.4e-23 Score=224.37 Aligned_cols=337 Identities=17% Similarity=0.149 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccch
Q 009195 106 DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW 185 (540)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (540)
..++..+...++..+|.+++|+++||+ |||++++++.++.+++.++..++... .
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~-------------------------~ 100 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY-------------------------N 100 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc-------------------------c
Confidence 467889999999999999999999998 99999999999999999988876210 1
Q ss_pred hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc---cchHHHH
Q 009195 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME---HGWGSAF 262 (540)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~---~gw~~~f 262 (540)
+...+.++|++.|++.|+..+..+.++.|..|++. |+...++.+....+|..++..++..+.+. .+||+.+
T Consensus 101 ~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~ 174 (451)
T PF00083_consen 101 NFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILL 174 (451)
T ss_pred ccccccccccccccccccccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccc
Confidence 67889999999999999999999999999999999 99999998888888888887766544332 3599988
Q ss_pred HHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCch
Q 009195 263 GALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFR 342 (540)
Q Consensus 263 ~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 342 (540)
++.++..++.++...+ +||||+| ++.+++.+++.+..+++++.+..+
T Consensus 175 ~~~~~~~l~~~~~~~~--------------------------------~pESP~w-L~~~~~~~~A~~~l~~~~~~~~~~ 221 (451)
T PF00083_consen 175 IFGAIPSLLVLLLRFF--------------------------------LPESPRW-LLSKGRDEEAEKVLRKLRGKEIED 221 (451)
T ss_pred cccccccccccccccc--------------------------------cccccce-eccccccccccccccccccccccc
Confidence 8877766544433322 6999999 999988889988888865432111
Q ss_pred -hhHHHhhhhccccCCCCCCcccchhhHHHHHHHHhhhhhhhhhHHHH-HHhhhhhhHHHHHHhhhccc-c---------
Q 009195 343 -CLDKAALELKEDVINPSPWKLCTVTQVEEVKTLVRLVPIPACTIMLN-VILTEFLTLSVQQAYTMNTH-M--------- 410 (540)
Q Consensus 343 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~l~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~-~--------- 410 (540)
..++.....+...+.+..|+...+... .+++++..+.+...+.... ....++.+.+.. ..+.+.. .
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~ 299 (451)
T PF00083_consen 222 EEIEEIKAEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNSFLATLILGLVN 299 (451)
T ss_pred ccccccccccccccccceeeeecccccc-cccccccccccccccccccccccccccccccc-cccccccccccccccccc
Confidence 111111111110001122333222211 2233333333333332221 111111111111 1111111 0
Q ss_pred ------------CCCCCCCh---hHHHHHHHHHHH------H------HHHH--------h-----------------cc
Q 009195 411 ------------GHPRGASQ---LQRVGIGLAVSI------L------SVIW--------A-----------------AP 438 (540)
Q Consensus 411 ------------~~~~~~~~---~~~~~~g~~~~~------~------~~~~--------~-----------------~P 438 (540)
+.+++... ...+.+..+..+ . ..+. + +|
T Consensus 300 ~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfP 379 (451)
T PF00083_consen 300 FLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFP 379 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccc
Confidence 11111100 000011100000 0 0000 0 99
Q ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009195 439 DAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKY 518 (540)
Q Consensus 439 ~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~~~~ 518 (540)
.+.|+.++|+....+++++++++.+.+.+.+..+ ....|+++++++++..++.+++.||+++
T Consensus 380 t~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~------------------~~~~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 380 TKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG------------------GWGVFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred cccccccccccccccccccccccccccccccccc------------------ccccchhhHHHHHHHHhheeEEEeeCCC
Confidence 9999999999999999999999988887665222 1245778888888998899999999999
Q ss_pred cccccCCCc
Q 009195 519 RSEQKHGND 527 (540)
Q Consensus 519 ~~~~~~~~~ 527 (540)
++++|++++
T Consensus 442 ~~l~ei~~~ 450 (451)
T PF00083_consen 442 KTLEEIQEM 450 (451)
T ss_pred CCHHHHHhh
Confidence 999987764
No 36
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.83 E-value=1.8e-18 Score=186.27 Aligned_cols=156 Identities=15% Similarity=0.071 Sum_probs=127.8
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccc
Q 009195 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDR 171 (540)
Q Consensus 92 ~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~ 171 (540)
..+.+.+++|++..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..++.+.++.....
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~------------ 117 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLGS------------ 117 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHhc------------
Confidence 34567889999999999999999999999999999999998 99999998888777766665543110
Q ss_pred cccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHH
Q 009195 172 ISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (540)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~ 251 (540)
...+...+++.|++.|++.+...+....+++|++|+++ |++.++++..+.++|+.+++.+..+
T Consensus 118 -----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 118 -----------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred -----------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHH
Confidence 00467889999999999999999999999999999999 9999999999999999999998877
Q ss_pred hhhcc---chHHHHHHHHHHHHHHHHHHH
Q 009195 252 IQMEH---GWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 252 l~~~~---gw~~~f~i~~i~~~~~~~~~~ 277 (540)
+.... +|+..|.+.++..++..++.+
T Consensus 181 ~~~~~~~~~~~~~f~~~g~~~~~~~i~~~ 209 (467)
T PRK09556 181 GANYFFDGHVIGMFIFPSIIALIIGFIGL 209 (467)
T ss_pred HHHhhccCcchhHHHHHHHHHHHHHHHHH
Confidence 76643 588888776665544433333
No 37
>PRK09952 shikimate transporter; Provisional
Probab=99.83 E-value=1.4e-17 Score=177.98 Aligned_cols=178 Identities=16% Similarity=0.155 Sum_probs=130.5
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCChHHHHHHH-----HHHHHHHHHHHhHHHHHhhhccchH
Q 009195 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM--HKSFADSSNAV-----NNFLGISQASSVLGGFLADAYLGRY 136 (540)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l--g~~~~~~~~~~-----~~~~~~~~~~~~~~G~lsD~~~GR~ 136 (540)
...+++.....++..+++.+.+..+....+.++.+++ +.++.. +++. ++..++..++.++.|+++||+ |||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr 94 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRK 94 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccH
Confidence 3455666777777777777777655445555666655 666653 3332 233345667888899999998 999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccC
Q 009195 137 WTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF 216 (540)
Q Consensus 137 ~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~ 216 (540)
+++.++.+++.++.++++++.++.... -.....++++|++.|++.|+..+....++.|.+
T Consensus 95 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 95 RMLMLTVWMMGIATALIGLLPSFSTIG--------------------WWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHH--------------------HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 999999999999998888762100000 011235778999999999999999999999999
Q ss_pred CCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh--------hccchHHHHHHHHHHH
Q 009195 217 DERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAM 269 (540)
Q Consensus 217 ~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~--------~~~gw~~~f~i~~i~~ 269 (540)
|+++ |+...+..+.+..+|..++..+..++. ..+|||+.|++.++..
T Consensus 155 p~~~------rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~ 209 (438)
T PRK09952 155 PKNK------KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLV 209 (438)
T ss_pred CCCC------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHH
Confidence 9988 999888888888888888877766654 2579999998876654
No 38
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=2.4e-18 Score=174.80 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLS---VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~---~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
--+.++...++...++|.+. ....+++.++.++|.+|.+.+.+.+.+.+.++-.+.|.++||. +.|..+-++.++.
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLils 104 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHH
Confidence 34667777788888888764 3457789999999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.+..+++.++ .+...+.+..++.|++.|.-.|.....++.+||+++
T Consensus 105 ai~nil~Gfs----------------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------ 150 (448)
T COG2271 105 AIVNILFGFS----------------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------ 150 (448)
T ss_pred HHHHHHHhhh----------------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------
Confidence 9999888876 457778888899999999999999999999999999
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHH--HHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLV--VYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~--~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
||+..++++.+-|+|+++.|.+. +++..+.+||.+|++++++.++..+.++..
T Consensus 151 RG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 151 RGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred cCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999998876655555443
No 39
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.82 E-value=4.8e-18 Score=182.33 Aligned_cols=151 Identities=14% Similarity=0.092 Sum_probs=125.9
Q ss_pred HHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccc
Q 009195 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (540)
Q Consensus 93 ~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 172 (540)
...+.+++|++.++.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++.+
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~---------------- 104 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS---------------- 104 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh----------------
Confidence 4566789999999999999999999999999999999997 99999999998888888877665
Q ss_pred ccccCCCCCccchhHHHHHH-HHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHH
Q 009195 173 SQLLGSCEPAKSWQMLYLYT-VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (540)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~ 251 (540)
.+...+++ .|++.|++.+...+...+++.+.++ ++ |++..++.+.+..+|..++|.++++
T Consensus 105 ------------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 105 ------------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred ------------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHH
Confidence 34555544 4688899988766666678889885 56 9999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 252 IQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 252 l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
+.+.+|||+.|++.+++.+++.+..++.
T Consensus 166 l~~~~gwr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 166 LFESFGWRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887766555544443
No 40
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.82 E-value=6.3e-17 Score=174.68 Aligned_cols=175 Identities=15% Similarity=0.089 Sum_probs=132.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+++.+.......++..+..+.+.. ...++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAP-LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 444555555555555555554443 34577889999999999999999999999999999999998 9999999998888
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.++++++ .+...+++.|++.|++.+... ....+++|++|+++
T Consensus 112 ~~~~~~~~~~----------------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------ 156 (476)
T PLN00028 112 APAVFCMSLV----------------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------ 156 (476)
T ss_pred HHHHHHHHHh----------------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------
Confidence 8887777665 356677888999999988654 34567899999988
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhh----h-----ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQ----M-----EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~----~-----~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|++++++.+...++|+.+++.+.+.+. + ..|||+.|++.+++.++..++.++
T Consensus 157 rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 157 VGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999987777777777766655442 2 248999999887776555444443
No 41
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.81 E-value=3.2e-17 Score=172.57 Aligned_cols=172 Identities=12% Similarity=-0.012 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH-----HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-----SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~-----~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
......+..++..+++....+.++.|++ ++|++..+ .+++.+++.++..++.++.|+++||+ |||++++++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHH
Confidence 4555566677777887777777787775 58887554 37888889999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++... .+...+++.|++.|++.+ ..+....++.|.+|+++
T Consensus 93 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~---- 139 (408)
T PRK09874 93 GMGIVMVLMGLA----------------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK---- 139 (408)
T ss_pred HHHHHHHHHHHH----------------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh----
Confidence 888887776654 457788889999998855 45777788899999887
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|++..++++...++|..++|.+++++.+..+|++.|++.++..++..+..+.
T Consensus 140 --~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 140 --SGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998889999998887766555544433
No 42
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.81 E-value=8.9e-18 Score=180.58 Aligned_cols=147 Identities=15% Similarity=0.162 Sum_probs=128.1
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCC
Q 009195 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (540)
Q Consensus 99 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (540)
+++++..+.+++.+.+.+++.++.+++|+++||+ |||+++.++.++..++.+++..+..
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999888887776654321
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhcc-c
Q 009195 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-G 257 (540)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~-g 257 (540)
.+...+++.|++.|++.+...+....+++|.+|+++ |+++.++++.+.++|..++|.+++++.+.. |
T Consensus 129 ------~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g 196 (465)
T TIGR00894 129 ------GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGG 196 (465)
T ss_pred ------cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 235678889999999999999999999999999988 999999999999999999999999999884 9
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 009195 258 WGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 258 w~~~f~i~~i~~~~~~~~~~~ 278 (540)
||+.|++.++..++..++++.
T Consensus 197 w~~~f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 197 WPMIFYVFGIVGCAWSLLWFV 217 (465)
T ss_pred CCeehhhhhHHHHHHHHHHHH
Confidence 999999887766555444443
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.81 E-value=1.5e-17 Score=171.36 Aligned_cols=173 Identities=17% Similarity=0.080 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~ 153 (540)
++...++..++.......++.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHH
Confidence 445566666666555566666665 5899999999999999999999999999999998 99999999998888877776
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHH
Q 009195 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (540)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~ 233 (540)
...... +. .+...++++|++.|++.+...+...++++|.+|+++ |++.+++
T Consensus 82 ~~~~~~----~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 132 (365)
T TIGR00900 82 PFVALL----GG-------------------LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSL 132 (365)
T ss_pred HHHHHc----CC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhH
Confidence 665210 00 267888999999999999999999999999999887 9999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 234 ~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
++....+|..++|.+++++.+..||++.|++.++..+++.+..+
T Consensus 133 ~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 133 SQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999989999999887776655544433
No 44
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.81 E-value=4.9e-17 Score=173.30 Aligned_cols=178 Identities=16% Similarity=0.209 Sum_probs=130.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHHHHHH---HHHHHHHHhHHHHHhhhccchHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNF---LGISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg---~~~~~~~~~~~~~---~~~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
++..+....+..+++.+.++. ..++..++.++++ .+..+.+.+.+.+ .++..++.+++|+++||+ |||+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~ 97 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHH
Confidence 333445555566777777754 5566678888874 5555444444444 444458999999999998 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 141 i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
++.+++.++.++++++.++.... -.....+++.|+++|++.|+..+...++++|.+|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~ 157 (432)
T PRK10406 98 ISVCMMCFGSLVIACLPGYETIG--------------------TWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR 157 (432)
T ss_pred HHHHHHHHHHHHHhhcCCchhHH--------------------HHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc
Confidence 99999999998887752100000 0123468899999999999999999999999999988
Q ss_pred chhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh--------hccchHHHHHHHHHHHHHH
Q 009195 221 KDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGIS 272 (540)
Q Consensus 221 ~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~--------~~~gw~~~f~i~~i~~~~~ 272 (540)
|++..++.+.+.+.|..+++.+...+. ..+|||+.|++.++..++.
T Consensus 158 ------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 158 ------KGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred ------ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 999999888888888888877655443 2579999998876655443
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.81 E-value=9.2e-17 Score=170.25 Aligned_cols=149 Identities=15% Similarity=0.086 Sum_probs=131.3
Q ss_pred HHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccccc
Q 009195 95 FMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQ 174 (540)
Q Consensus 95 yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (540)
.+.+++|.+..+.++.++++.++..++.+++|+++||+ |||++++.+.+++.++.+++..+
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a------------------ 101 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT------------------ 101 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc------------------
Confidence 46789999999999999999999999999999999998 99999999999999988888775
Q ss_pred ccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 175 LLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
.+...++++|+++|++.+...+....++.|.+|+++ |++.+++++...++|..++|++++++.+
T Consensus 102 ----------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~ 165 (413)
T PRK15403 102 ----------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMH 165 (413)
T ss_pred ----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788999999999988766777788999999888 9999999999999999999999999998
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 255 EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 255 ~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+.|||+.|++.++..+++.+..+.
T Consensus 166 ~~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 166 FVHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999888776666554433
No 46
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.81 E-value=5.3e-17 Score=170.12 Aligned_cols=171 Identities=13% Similarity=0.108 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++.+.+..++.....+...+.+ +.+++++|++.++.++..+.+.++..++.++.|+++||+ |||+++.++.++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVL-TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhCh-HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 45666667777777766665655 456778999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.++++.+ .+.+.+++.|++.|++.+...+....++.|.+++++ |++
T Consensus 82 ~~l~~~~----------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~ 127 (382)
T PRK10091 82 NAMFTLS----------------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTA 127 (382)
T ss_pred HHHHHHh----------------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhH
Confidence 8888775 467889999999999999888888889999999877 899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
.++++..+..+|..++|.+++++.+..+||+.|++.++..++..+..
T Consensus 128 ~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 128 AVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 99998889999999999999999988999999998877655544433
No 47
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.80 E-value=1.2e-17 Score=172.62 Aligned_cols=157 Identities=14% Similarity=0.055 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 009195 85 YFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (540)
Q Consensus 85 ~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~ 164 (540)
.|.. ..+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++
T Consensus 19 ~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~-------- 88 (377)
T TIGR00890 19 VYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA-------- 88 (377)
T ss_pred Hhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH--------
Confidence 4443 4456788899999999999999999999999999999999998 99999999999999999888876
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHH
Q 009195 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIV 244 (540)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i 244 (540)
.+...++++|++.|++.+...+.....+.|.+| ++ |++..+++..+.++|..+
T Consensus 89 --------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~ 141 (377)
T TIGR00890 89 --------------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFI 141 (377)
T ss_pred --------------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhH
Confidence 567888999999999999888788888888886 45 899999999999999888
Q ss_pred HHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 245 AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 245 ~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
++.+.+.+.+..|||+.|++.++..++..+..+.
T Consensus 142 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 142 LSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777789999999887776555544433
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.80 E-value=3.3e-17 Score=177.41 Aligned_cols=168 Identities=14% Similarity=0.214 Sum_probs=145.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+.+|+.+..+.+..++..+..+.+. .+..++.+++|++..+.++..+.+.++..++.+++|+++||+ |||++++++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLIT-LVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 4566666677777777667665444 445677789999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++.++ .+...++++|++.|++.++..+....++.|.+|+++
T Consensus 94 ~~~~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---- 141 (496)
T PRK03893 94 LFSVGTLACGFA----------------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL---- 141 (496)
T ss_pred HHHHHHHHHHHH----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH----
Confidence 998888887765 467788999999999999999999999999999888
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
|++.+++++.+.++|..++|.+.+++.+..+||+.|++.++.
T Consensus 142 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~ 183 (496)
T PRK03893 142 --RNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILP 183 (496)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999998875443
No 49
>PRK03699 putative transporter; Provisional
Probab=99.80 E-value=7e-17 Score=169.90 Aligned_cols=175 Identities=7% Similarity=0.054 Sum_probs=144.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
.+|++..+...+..++.....+.+...+ +.+.+++|++.++.+++.+.+.++..++.+++|+++||+ |||+++.++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~ 80 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVM-GPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFA 80 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHH
Confidence 4566777777777777666665554444 456788999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++.++ .+...+++.|++.|++.|...+....++.|.+|+++
T Consensus 81 ~~~i~~~l~~~~----------------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~---- 128 (394)
T PRK03699 81 LMILAVAGLMFS----------------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ---- 128 (394)
T ss_pred HHHHHHHHHHHc----------------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch----
Confidence 888888877765 457788899999999999888888999999999887
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~-~~gw~~~f~i~~i~~~~~~~~ 275 (540)
|++.++..+....+|+.++|.+.+++.. ..|||+.|.+.++..++..++
T Consensus 129 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 129 --RGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 9999988888888999999999888764 568999998877665554443
No 50
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.80 E-value=2.8e-17 Score=178.31 Aligned_cols=180 Identities=14% Similarity=0.058 Sum_probs=152.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+|..+..+++..++..+....+.+.+| .+.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p-~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAP-TLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 466777778888888888866655554 55678999999999999999999999999999999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccC-CCCCchhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF-DERSKDYKT 225 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~-~~~~~~~~~ 225 (540)
.++.++++.+ .+...++++|+++|+|.++..+.....+.+.+ |+++
T Consensus 82 ~~~~~~~~~a----------------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~----- 128 (495)
T PRK14995 82 GLASLAAAFS----------------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ----- 128 (495)
T ss_pred HHHHHHHHHc----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH-----
Confidence 9999998876 46888999999999999998888888787777 5555
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
|+++++++....++|..+||.+++++.++.||||.|++...+.++.+++.....++
T Consensus 129 -r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~ 184 (495)
T PRK14995 129 -RNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPR 184 (495)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999998776665555544444443
No 51
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.80 E-value=1.2e-16 Score=166.34 Aligned_cols=177 Identities=18% Similarity=0.167 Sum_probs=146.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+.+.++.+.+..++..++.....+. .+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPA-FPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 3444455555555555555444444 3456788999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.+++..+ .+...++++|++.|++.+...+...+++.|.+|+++
T Consensus 81 ~~~~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------ 126 (385)
T TIGR00710 81 ALSSLGLALS----------------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------ 126 (385)
T ss_pred HHHHHHHHHH----------------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------
Confidence 8888887765 457788899999999999999999999999999888
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
|++.+++.+....+|..++|.+++++.+..+|++.|++.++..++..+..+..
T Consensus 127 ~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 127 LSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999998999999988777665555544443
No 52
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.80 E-value=7.2e-18 Score=179.56 Aligned_cols=148 Identities=20% Similarity=0.239 Sum_probs=134.7
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCC
Q 009195 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (540)
Q Consensus 99 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (540)
+++++..+.+++.+.+..|+.++.+.+|+++||+ |-|+++.++.++.+++.++..+++.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~-------------------- 125 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS-------------------- 125 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6788999999999999999999999999999998 9999999999999999999998854
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc-cc
Q 009195 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME-HG 257 (540)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~-~g 257 (540)
.+...+++.|+++|++.|...+++..+.+.+.|+++ |+++.++.+.+..+|.+++-.++|++.+. .|
T Consensus 126 ------~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~G 193 (466)
T KOG2532|consen 126 ------IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLG 193 (466)
T ss_pred ------hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC
Confidence 344577899999999999999999999999999999 99999999999999999999999999988 99
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 009195 258 WGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 258 w~~~f~i~~i~~~~~~~~~~~~ 279 (540)
|++.|++.++..++..++++..
T Consensus 194 W~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 194 WPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred CchHHHHHHHHHHHHHHHHHHH
Confidence 9999999888877666665553
No 53
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.80 E-value=5.1e-17 Score=165.93 Aligned_cols=170 Identities=19% Similarity=0.248 Sum_probs=147.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
.+.+..++..+..+......+.+. +++|.+..+.+++.+...++..++.++.|+++||+ |||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence 445566777777776666666666 56799999999999999999999999999999998 9999999999999999888
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
+... .+...++++|++.|++.+...+...+++.|.+|+++ |++.++
T Consensus 81 ~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 126 (352)
T cd06174 81 LAFA----------------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALG 126 (352)
T ss_pred HHHh----------------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhh
Confidence 8765 457788899999999999999999999999999988 999999
Q ss_pred HHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 233 ~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+.+...++|..++|.+++.+.+..+|++.+++.++..++..+....
T Consensus 127 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 127 LFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLF 172 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999889999999887776666555444
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.79 E-value=2.9e-16 Score=165.74 Aligned_cols=172 Identities=12% Similarity=0.057 Sum_probs=139.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
-+.||.+....+..++..++.+....+++.++ +++|.+..+.+++.+.+.++..++.+++|+++||+ |||+++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 45566777788888888888777777788887 57899999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++..... .. .+...+++.|++.|++.+...+...+.+.+.+|+++
T Consensus 87 ~~~~~~~~~~~~~~-----~~-------------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~---- 138 (402)
T TIGR00897 87 LWCVGHAAFIVFGL-----GH-------------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN---- 138 (402)
T ss_pred HHHHHHHHHHHHhc-----cC-------------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH----
Confidence 88887665532110 00 246677788999999988777777788889999888
Q ss_pred hhhhhHHHHHHHHHhHHH-HHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~-~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
|+++.++++.+.++|. .++|.+++++.+..||+..++.....
T Consensus 139 --~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 139 --LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 9999999999999986 58999999998888876666554443
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.79 E-value=4.4e-17 Score=173.94 Aligned_cols=156 Identities=12% Similarity=0.060 Sum_probs=126.9
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 009195 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (540)
Q Consensus 91 ~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
...+++++ +|++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.+++..... . .
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~---~--~----- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPW---A--T----- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccc---c--c-----
Confidence 33456665 599999999999999999999999999999998 9999999998888887776654310 0 0
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Q 009195 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (540)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~ 250 (540)
.+...+++.|++.|++.|...+.....+.|.+|+++ |++++++++...++|+.+++.+.+
T Consensus 116 --------------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~ 175 (438)
T TIGR00712 116 --------------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVL 175 (438)
T ss_pred --------------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHH
Confidence 245667788999999999988888899999999998 999999999999999999988877
Q ss_pred Hhh-hccchHHHHHHHHHHHHHHHHHHHH
Q 009195 251 YIQ-MEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 251 ~l~-~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
.+. ...+||+.|++.++..++..++.++
T Consensus 176 ~~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 176 LGMAWFNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 644 4568999999887776655444444
No 56
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.79 E-value=1.5e-16 Score=167.02 Aligned_cols=171 Identities=16% Similarity=0.118 Sum_probs=140.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
....+..+....+.....+. .+.+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+.++++.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~ 83 (392)
T PRK10473 6 LCSFALVLLYPAGIDMYLVG-LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASL 83 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhh-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHH
Confidence 33444445555555444444 4456678999999999999999999999999999999998 999999999999888888
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
.+..+ .+...++++|++.|++.+...+...+++.|.+|+++ |++.+
T Consensus 84 ~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 129 (392)
T PRK10473 84 LCSLA----------------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVL 129 (392)
T ss_pred HHHHh----------------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHH
Confidence 77664 356678889999999999988899999999999888 99999
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
++.+...++|..++|.+++++.+..+|++.|++.++..++..++.+.
T Consensus 130 ~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 130 SLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888889999998877766555444433
No 57
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.78 E-value=1.3e-16 Score=165.71 Aligned_cols=169 Identities=11% Similarity=0.041 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHH-HHHHHHHHHHHH
Q 009195 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAI-FTTIYLAGLTGI 153 (540)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i-~~~l~~i~~~~~ 153 (540)
.+..++..++.....+.++.|+++++|.+..+.+++.+.+.++..+..++.|+++||+ ||||.+++ +.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3456677777777888899999999999999999999999999999999999999998 99887655 445445555555
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH--H
Q 009195 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF--F 231 (540)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~--~ 231 (540)
+.+ .+...+++.|++.|.+.+...+...++..|..|++. |... .
T Consensus 82 ~~~----------------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~ 127 (375)
T TIGR00899 82 AWN----------------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFS 127 (375)
T ss_pred Hhc----------------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHH
Confidence 554 356677788888888877777888888888887665 5543 5
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
++.+...++|..++|.+++++.+..|||+.|++.++..++..++.++
T Consensus 128 ~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 128 SVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 66777788999999999999998899999999887766555554443
No 58
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.3e-18 Score=178.19 Aligned_cols=181 Identities=19% Similarity=0.223 Sum_probs=162.9
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHH
Q 009195 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (540)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~ 142 (540)
..+..++.+..++++.+++++.-|.+... -.-.++.+|.+++..+++...+.+..+++.|+.|+|+||| .|++++.++
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv-~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG 104 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGV-LKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVG 104 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhh-hHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeH
Confidence 33455567889999999999999987664 4567889999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 009195 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (540)
Q Consensus 143 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (540)
.++..++.+.+.++ ..++++.+.|.+.|+|.+.+.+..+++++|.||...
T Consensus 105 ~~iW~~Av~~~~fs----------------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~-- 154 (493)
T KOG1330|consen 105 IFIWTLAVFASGFS----------------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK-- 154 (493)
T ss_pred HHHHHHHHHHHHHH----------------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh--
Confidence 99999999999887 568999999999999999999999999999999998
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHHh
Q 009195 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 223 ~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~~ 279 (540)
|++.++++|+++++|.++|.+++.++.+..+ |||+|++.+++.++..++.++.
T Consensus 155 ----Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f 208 (493)
T KOG1330|consen 155 ----RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLF 208 (493)
T ss_pred ----hhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhh
Confidence 9999999999999999999999999988877 9999999888876666655543
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.78 E-value=2.1e-16 Score=165.56 Aligned_cols=155 Identities=15% Similarity=0.162 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
.+.++.+++..++..++...+.+.++.|+. ++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 346788888888888888777788887776 6899999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++.+.+..+ .+...++++|++.|++.+...+.....+.+..++++ |
T Consensus 83 ~~~~~~~~~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~ 128 (381)
T PRK03633 83 AGCAGLGLM----------------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------R 128 (381)
T ss_pred HHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------H
Confidence 888877765 457788899999999999988888788888888777 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
++.+++++...++|..+||.+++++.+...|
T Consensus 129 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~ 159 (381)
T PRK03633 129 GRLLAAYMMVYYLGTVLGQLLVSKVSTELMS 159 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 9999999999999999999999998765433
No 60
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.78 E-value=9e-17 Score=173.20 Aligned_cols=176 Identities=16% Similarity=0.130 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
....+.+..++..+....+. ...+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVN-VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 34455556666666654444 445567788999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++..+ .+...++++|++.|++.+...+...+++.|.+|+++ |++
T Consensus 81 ~~~~~~~----------------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~ 126 (485)
T TIGR00711 81 SLLCGVA----------------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGR 126 (485)
T ss_pred HHHHhCc----------------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHH
Confidence 8888765 457788999999999999999999999999999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
++++++....+|..++|.+++++.++.+|++.|++.++..++..++..+..+
T Consensus 127 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 178 (485)
T TIGR00711 127 AMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILP 178 (485)
T ss_pred HHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999877766555554444433
No 61
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.78 E-value=4.5e-17 Score=167.08 Aligned_cols=167 Identities=20% Similarity=0.262 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (540)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~ 154 (540)
++..++..+........++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4555666666666666666588999999999999999999999999999999999997 999999999999999855555
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHH
Q 009195 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (540)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~ 234 (540)
++ .+...++++|++.|++.+...+...+++.|.+|+++ |++.+++.
T Consensus 81 ~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~ 126 (352)
T PF07690_consen 81 FA----------------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGIL 126 (352)
T ss_dssp HH----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHH
T ss_pred hh----------------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccc
Confidence 43 234588999999999999999999999999999988 99999999
Q ss_pred HHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 235 ~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
+...++|..++|.+++++.+..+|++.|++.++..++..++.
T Consensus 127 ~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 127 SAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhH
Confidence 999999999999999999988899999999888877776643
No 62
>PRK15075 citrate-proton symporter; Provisional
Probab=99.77 E-value=3.5e-16 Score=166.85 Aligned_cols=176 Identities=15% Similarity=0.095 Sum_probs=129.7
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHH-HHHHHHHH-----HHHHHHhHHHHHhhhccchHH
Q 009195 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSS-NAVNNFLG-----ISQASSVLGGFLADAYLGRYW 137 (540)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~-~~~~~~~~-----~~~~~~~~~G~lsD~~~GR~~ 137 (540)
...+++.....++..++..+....+. .+.+.+.++++.+..+.+ +..+.... +..++.++.|+++||+ |||+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~ 87 (434)
T PRK15075 10 RESKARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRK 87 (434)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHH
Confidence 34556677777788888888886554 445578888998776543 33332222 2246788999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 009195 138 TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (540)
Q Consensus 138 ~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (540)
+++++.+++.++.++++++.+...+. ......++++|++.|++.|...+....+++|.+|
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~~~~~--------------------~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 147 (434)
T PRK15075 88 GLIVTLSIMASGTLLIAFVPGYATIG--------------------LAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIAT 147 (434)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHH--------------------HHHHHHHHHHHHHhhccccccHHHHHHHHHhhCC
Confidence 99999999999998888752100000 0001246889999999999999989999999999
Q ss_pred CCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHh--------hhccchHHHHHHHHH
Q 009195 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI--------QMEHGWGSAFGALAI 267 (540)
Q Consensus 218 ~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l--------~~~~gw~~~f~i~~i 267 (540)
+++ |++..+++....++|..+++.+++.+ .+..|||+.|++..+
T Consensus 148 ~~~------rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 148 PGR------KGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred ccc------chHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 998 99999998888788877777777665 246799999987543
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.77 E-value=5.9e-16 Score=162.86 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH-HHHHHHHHhHHHHHhhhccchHHHHH-HHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNF-LGISQASSVLGGFLADAYLGRYWTIA-IFTTIYL 147 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~G~lsD~~~GR~~~i~-i~~~l~~ 147 (540)
..+..++..++..++...+.+.++.|+.+++|.+.++.+++.+.. ..+..++++++|+ +||+ ||||.++ .+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHH
Confidence 456666668888888877888999999999999999999987665 4466666666666 9998 9988754 4555544
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++..+++++ .+...+++.+.+.+...+...+....+..|..++++ |
T Consensus 94 ~~~~~~~~~----------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 139 (393)
T PRK15011 94 LACTLFAWN----------------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------R 139 (393)
T ss_pred HHHHHHHHh----------------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------c
Confidence 555555443 345555444444444445667777788888776554 4
Q ss_pred h--hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 228 D--RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 228 ~--~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
. ...++.+.+.++|..++|.+++++.++.|||+.|++.++..++..+..+.
T Consensus 140 ~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 140 EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 3 33467788899999999999999999899999998877665555444443
No 64
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.76 E-value=8.6e-16 Score=161.41 Aligned_cols=174 Identities=14% Similarity=0.110 Sum_probs=143.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
.+|..+...+..++..+..+...+.+ +++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAI-ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 45666666666666666655444443 456688999999999999999999999999999999998 9999999999888
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.+++..+ .+...+++.|++.|++.+...+....+..|.++.++
T Consensus 84 ~~~~~~~~~~----------------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 129 (394)
T PRK11652 84 ILGTLVALFA----------------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------ 129 (394)
T ss_pred HHHHHHHHHH----------------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------
Confidence 8888877664 457788899999999998877777888889888776
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
|++..+++..+..++..++|.+++++.+..||++.|++.++..++..++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 130 LRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999888899999998776655444333
No 65
>TIGR00895 2A0115 benzoate transport.
Probab=99.76 E-value=2.9e-16 Score=163.77 Aligned_cols=176 Identities=16% Similarity=0.116 Sum_probs=144.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+.+|+.+...++..+...+..+. .....+++.+++|++..+.+++.+...++..++.++.|+++||+ |||+++.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAA-MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHH
Confidence 34455555555555555555543 34455667788999999999999999999999999999999998 99999999998
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++..+ .+...+++.+++.|++.+...+...++++|.+|++.
T Consensus 91 ~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---- 138 (398)
T TIGR00895 91 LFSVFTLLCALA----------------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF---- 138 (398)
T ss_pred HHHHHHHHHHHc----------------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh----
Confidence 888887777654 356778889999999999999999999999999888
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
|++.+++++.+..+|..+++.+++++.+..||++.|++.++...+..++.
T Consensus 139 --r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 188 (398)
T TIGR00895 139 --RGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLL 188 (398)
T ss_pred --hchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHH
Confidence 99999999999999999999999999998999999988754444433333
No 66
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.76 E-value=1.3e-16 Score=165.02 Aligned_cols=153 Identities=13% Similarity=0.059 Sum_probs=133.3
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 009195 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (540)
Q Consensus 91 ~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
...+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||++++++.++..++.+++.++
T Consensus 16 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~-------------- 80 (379)
T TIGR00881 16 LAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS-------------- 80 (379)
T ss_pred hhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh--------------
Confidence 345678889999999999999999999999999999999998 99999999999999988888776
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHH-HHH
Q 009195 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF-TLV 249 (540)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p-~i~ 249 (540)
.+...++++|++.|++.+...+...++++|.+|+++ |++.+++.+...++|..++| .++
T Consensus 81 --------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 140 (379)
T TIGR00881 81 --------------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVL 140 (379)
T ss_pred --------------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHH
Confidence 457788899999999999999999999999999888 99999999999999999999 577
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 250 VYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 250 ~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+.+.+..+|++.|++.+++.++..++.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 141 FGIAELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 77777789999998877665554444433
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.75 E-value=2.9e-15 Score=157.71 Aligned_cols=162 Identities=14% Similarity=0.056 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
.+.+....++..++...+...++ .+.+++|.+..+.+++.+.+.+...++.+++|+++||+ |||++++++.++..++.
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~ 82 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFAAI-ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGC 82 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHH
Confidence 45566666776665544434344 34678999999999999999999999999999999998 99999999999998887
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+.+... .+ .++.|+++|++.+...|...++++|.+|+++ |+++
T Consensus 83 ~~~~~~----------------------------~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a 125 (393)
T PRK11195 83 LLMLFG----------------------------IH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKA 125 (393)
T ss_pred HHHHHH----------------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 766553 22 2678999999999999999999999999888 9999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~ 272 (540)
.++.....++|..+||.+++++.+. .|+..+.+.+.+.+++
T Consensus 126 ~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 126 NGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875 3766666555444333
No 68
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.74 E-value=4.6e-15 Score=157.38 Aligned_cols=179 Identities=8% Similarity=-0.048 Sum_probs=129.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
|.++...+..++.....+.. +.+..++.+ ++|++.++.++..+++.+++.++.++.|++.||+ |.|+++.++.++..
T Consensus 34 r~l~~s~~~f~~~F~~w~~~-~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLF-SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 45555444444444444433 334455544 8999999999999999999999999999999998 99999999999988
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
+..++++++... .. .+...+++.|++.|++ |+..+.....++++||+++ |
T Consensus 112 i~~~~~~~a~~~----~~-------------------~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------r 161 (462)
T PRK15034 112 IPCVWLGIAVQN----PN-------------------TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------Q 161 (462)
T ss_pred HHHHHHHHHHcc----cC-------------------CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------h
Confidence 888877764110 00 3578899999999998 6678889999999999998 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhh-----h-------------ccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQ-----M-------------EHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~-----~-------------~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
+++++++....++|..+++++...+. . ..+|+.++++..+..+++.++.++.
T Consensus 162 G~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 162 GSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999986666677665555543322 2 2347777767666665555554443
No 69
>PRK11043 putative transporter; Provisional
Probab=99.74 E-value=3.4e-15 Score=157.26 Aligned_cols=166 Identities=16% Similarity=0.215 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 78 EMAERMAYFGLSVNMVTF--MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (540)
Q Consensus 78 ~~~~~~~~~~~~~~~~~y--l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~ 155 (540)
..+..++++....+.|.+ +++++|.+..+.++..+++.++..++.+++|+++||+ |||+++.++.++..++.+++..
T Consensus 12 ~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 12 AGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHH
Confidence 333344444444444433 6789999999999999999999999999999999998 9999999999888888777766
Q ss_pred hhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHH
Q 009195 156 CATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY 235 (540)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~ 235 (540)
+ .+...+++.|++.|++.+...+...+++.|.+++++ +++.++...
T Consensus 91 ~----------------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (401)
T PRK11043 91 V----------------------------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIM 136 (401)
T ss_pred h----------------------------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHH
Confidence 4 357778889999999988877788889999999877 888888887
Q ss_pred HHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 236 LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 236 ~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
...++|..++|.+++++.+.+||++.|++..+..++..+..+.
T Consensus 137 ~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 137 PLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999998877766655544433
No 70
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.74 E-value=3.8e-16 Score=159.62 Aligned_cols=141 Identities=16% Similarity=0.176 Sum_probs=105.0
Q ss_pred CChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCC
Q 009195 102 KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEP 181 (540)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (540)
++....+.+..+..+|..+|+++.||++|++ |||+++...+++.+++.++++++.. -.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~---------------------~~ 138 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVG---------------------TT 138 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCC---------------------CC
Confidence 5566778899999999999999999999997 9999999999999999886665411 11
Q ss_pred ccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHH----HHHhHHHHHHHHHHHHhhhc--
Q 009195 182 AKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFY----LSVTVGAIVAFTLVVYIQME-- 255 (540)
Q Consensus 182 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~----~~~~lg~~i~p~i~~~l~~~-- 255 (540)
+...-+.++...|+++|+|.|+=+|...+..+|....+. ||...+... ++.-.|+.++.++.+-+...
T Consensus 139 ~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~ 212 (538)
T KOG0252|consen 139 SPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFN 212 (538)
T ss_pred CCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCC
Confidence 111346788899999999999999999999999999888 888877633 33344444444443333211
Q ss_pred ---------cchHHHHHHHHHHHH
Q 009195 256 ---------HGWGSAFGALAIAMG 270 (540)
Q Consensus 256 ---------~gw~~~f~i~~i~~~ 270 (540)
.=||..|.+.++..+
T Consensus 213 ~~~~~~~ld~vWRl~~glg~vpa~ 236 (538)
T KOG0252|consen 213 GPSTYPHLDGVWRIIFGLGAVPAL 236 (538)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHH
Confidence 128888777665443
No 71
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.74 E-value=1.8e-17 Score=173.25 Aligned_cols=268 Identities=34% Similarity=0.511 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhcc
Q 009195 136 YWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQ 215 (540)
Q Consensus 136 ~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~ 215 (540)
+|+++++.+++++|.+++.+++...... .+.+...++++++++++|.|+..+++.++++||
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~~-------------------~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq 61 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSLP-------------------SGIQLGLFYIGLALIAVGTGGIKPNISPFGADQ 61 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC-------------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchhh-------------------hhHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 4889999999999999988876533221 124567899999999999999999999999999
Q ss_pred CCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccccccc-CCCCCchh
Q 009195 216 FDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR-LPGGSPLT 294 (540)
Q Consensus 216 ~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 294 (540)
+++++ ...|.++|++||++.|+|+.+++.+.+++++++||.++|+++.+.+++++++++..++.+++. ++.++++.
T Consensus 62 ~~~~~---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~ 138 (372)
T PF00854_consen 62 YDEDD---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLT 138 (372)
T ss_dssp SSTTT---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S
T ss_pred hcccc---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccc
Confidence 99773 233999999999999999999999999999999999999999999999999999999999888 67777777
Q ss_pred H-HHHHHHHHHHhhccccCCcccccccccCCCcccccCCcccccCCCchhhHHHhhhhccccCCCCCCc-ccchhhHHHH
Q 009195 295 R-VAQVLVAAFRKRHAAFSSSELIGLYEVPGKHSAIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWK-LCTVTQVEEV 372 (540)
Q Consensus 295 ~-~~~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 372 (540)
+ ...++....+++....|+...+ +.+.....+ .... ........ +........ ..|. .+..++++..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~-----~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~ 207 (372)
T PF00854_consen 139 NFIKLVLVAAFKKRKLAVPKGSSW-LDWALFQYS-ERSI-----FGIIVFIR-AAVIFFPEI---FFWALFCQVQRVEEL 207 (372)
T ss_dssp --SHHHHHHHHHHHCCCH-HHHHH-HHHHHHHHC-CCCC-----CCCCCHHH-HHHHHCCCH---HHHTTTSSTTTHHHC
T ss_pred hhHHHHHHHHHHHhhcccccchHH-HHHhhhhhh-hhhh-----hhhhhhcc-chhhhhhhh---hhcccCCccceeeee
Confidence 7 5555556666665555443333 221100000 0000 00000011 011000000 0010 1345567788
Q ss_pred HHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHhhhcccc----------------------------------CCCCCCCh
Q 009195 373 KTLVRLVPIPACTIMLNVILTEFLTLSVQQAYTMNTHM----------------------------------GHPRGASQ 418 (540)
Q Consensus 373 k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~----------------------------------~~~~~~~~ 418 (540)
+.+.+.++.+....+++..+.+.......+...+|..+ +++...+.
T Consensus 208 k~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~~~~~~~ 287 (372)
T PF00854_consen 208 KALIRFLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRRGIQPSP 287 (372)
T ss_dssp CHHHCHHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT------
T ss_pred eeeeeccccCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhhcccchh
Confidence 88889999998888888888888887777766664322 44456778
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 009195 419 LQRVGIGLAVSILSVIWA 436 (540)
Q Consensus 419 ~~~~~~g~~~~~~~~~~~ 436 (540)
..|+++|++++.++++++
T Consensus 288 ~~k~~~G~~~~~~~~~~~ 305 (372)
T PF00854_consen 288 PQKFGIGMVFAILAMFVA 305 (372)
T ss_dssp HHHHHHH-HHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHH
Confidence 888999988888887765
No 72
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=1.8e-16 Score=173.09 Aligned_cols=140 Identities=15% Similarity=0.128 Sum_probs=127.2
Q ss_pred HhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccC
Q 009195 98 YVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG 177 (540)
Q Consensus 98 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (540)
+..+.+.....+..+++.+|..+|++++|++||++ |||++++++.++.+++.++.+++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a--------------------- 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA--------------------- 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 45667788889999999999999999999999995 99999999999999999888887
Q ss_pred CCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc
Q 009195 178 SCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (540)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g 257 (540)
.+...+++.|++.|++.++...+...+++|+++++. |+...++ ......++.+++.+++++.. +
T Consensus 169 -------~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~ 232 (521)
T KOG0255|consen 169 -------PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--D 232 (521)
T ss_pred -------CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--h
Confidence 678999999999999999999999999999999999 9999999 77788888899999999887 7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 009195 258 WGSAFGALAIAMGISNML 275 (540)
Q Consensus 258 w~~~f~i~~i~~~~~~~~ 275 (540)
||+.+++..+..++.++.
T Consensus 233 Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 233 WRWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988877666555
No 73
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.72 E-value=7.3e-15 Score=153.06 Aligned_cols=155 Identities=17% Similarity=0.238 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 009195 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (540)
Q Consensus 88 ~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~ 167 (540)
..+.++.+. +++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+++..+
T Consensus 10 ~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~----------- 76 (377)
T PRK11102 10 YLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA----------- 76 (377)
T ss_pred HhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH-----------
Confidence 345555555 57999999999999999999999999999999998 99999999999999888888765
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 009195 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (540)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~ 247 (540)
.+...+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+....+|..++|.
T Consensus 77 -----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~ 133 (377)
T PRK11102 77 -----------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPI 133 (377)
T ss_pred -----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 356778889999999999999999999999999888 999999999999999999999
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 248 i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+++++.+..+|++.|++.++..++..++...
T Consensus 134 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 134 IGGWLLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999889999998877766555444433
No 74
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.71 E-value=2.6e-15 Score=159.32 Aligned_cols=178 Identities=8% Similarity=-0.143 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+......++..++++.+.++++.|+++++|++..+.+++.+.+.++..+++++.|+++||+ |||++++++..+..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 11 NYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLVL 89 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456666677777777777889999999999999999999999999999999999999999998 9999998876665544
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHH-HHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQML-YLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
...+...... .... ....+.++.++..+...........++.+... ..++
T Consensus 90 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g 140 (420)
T PRK09528 90 FGPFFIYVFA-------------------------PLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSG 140 (420)
T ss_pred HHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhcc
Confidence 3322211000 0000 01122222233333222222222223222111 1156
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
..++..+...++|..++|.+++++.+ .+|++.|++.++..++.+++.+.
T Consensus 141 ~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 189 (420)
T PRK09528 141 FEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFF 189 (420)
T ss_pred ccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhc
Confidence 66677777789999999999998876 48999998877766665555444
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.71 E-value=1e-14 Score=173.65 Aligned_cols=154 Identities=15% Similarity=0.110 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCh--HHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
.....++..++..+...+....+..++...++.+. ...+++.+++.++..++.+++|+++||+ |||++++++.++.+
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~ 88 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEV 88 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHH
Confidence 44455555666555554555555666666677654 3468888999999999999999999998 99999999987776
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++.++..++... .+...++++|++.|++.+...+...++++|.+|+++ |
T Consensus 89 ~~~~~~~~~~~~-------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r 137 (1146)
T PRK08633 89 GLTLLIVLAYYL-------------------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------L 137 (1146)
T ss_pred HHHHHHHHHHHH-------------------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------c
Confidence 666555443210 357788999999999999999999999999999988 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhc
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQME 255 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~ 255 (540)
+++++++..+.++|.++|+.+++++...
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998765
No 76
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.70 E-value=2.9e-14 Score=149.45 Aligned_cols=157 Identities=7% Similarity=-0.117 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH-HHHHHH-
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI-YLAGLT- 151 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l-~~i~~~- 151 (540)
+.+..++..+++-...++++.|++ ++|++..+.+++.+.+.++..++.++.|+++||+ ||++.......+ ..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHH
Confidence 444455555555456677778884 6899999999999999999999999999999998 985433222111 111111
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
.+..+ .+.+.+++.|++.+.+.+...+...++..|. .++ |++.+
T Consensus 87 ~~~~~----------------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~ 130 (382)
T TIGR00902 87 FSAGA----------------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDY 130 (382)
T ss_pred HHHhh----------------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCc
Confidence 11121 4577888889989999888888877776543 234 78888
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
+......++|..++|.+++++.+++||+..|++.++.
T Consensus 131 g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~ 167 (382)
T TIGR00902 131 GKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAG 167 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 8988899999999999999999999999998876554
No 77
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=1.8e-14 Score=146.92 Aligned_cols=182 Identities=14% Similarity=0.102 Sum_probs=148.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+.++|.++...+......+.. .+.+.+.+++++++|+|..|.++++.+-.+...+.+++-|++.||+ |-|++..++++
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW-~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVW-TLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHH-HHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 445556665555544444444 4556677888899999999999999999999999999999999997 98888899988
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+.++-.+.++++... .+.+.+++...+.|++. +..++..++++..||++.
T Consensus 88 l~~IP~~~~~~a~~~-------------------------~~~~~ll~~gll~G~~G-asFav~m~~~s~~fP~~~---- 137 (417)
T COG2223 88 LLLIPCLGLAFAVTY-------------------------PSTWQLLVIGLLLGLAG-ASFAVGMPNASFFFPKEK---- 137 (417)
T ss_pred HHHHHHHHHHHHccC-------------------------CchHHHHHHHHHHhccc-ceehcccccccccCChhh----
Confidence 888877777776431 23467888888999984 456788889999999999
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc---hHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g---w~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
+|.+.+++. ..|+|..+..+++.++....| |+....+..+.++++.+++++..+
T Consensus 138 --qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 138 --QGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred --hhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999998 999999999999999998888 999988888888887777666443
No 78
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.69 E-value=6.4e-14 Score=151.78 Aligned_cols=177 Identities=14% Similarity=0.079 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
+..+....++.+++.......++ .+..++.-|+...+++.....+-..+..+++|.++||+ .|||+++.+.++..+..
T Consensus 12 Fr~lw~a~~iS~lG~~~~~va~~-wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~ 89 (524)
T PF05977_consen 12 FRRLWIAQLISNLGDWMQTVALA-WLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVA 89 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHH
Confidence 34444555566666643333333 33445677888889999999999999999999999998 99999999988877665
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+.+++.... .. .+.+.+++..++.|++.+...|...+++.|++|+++ ...+
T Consensus 90 ~~L~~l~~~----~~-------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A 140 (524)
T PF05977_consen 90 LLLAVLAFF----GL-------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAA 140 (524)
T ss_pred HHHHHHHHh----Cc-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHH
Confidence 555543221 10 356778888899999999999999999999999988 8899
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
.++.....|+.-.+||.++|.+....|-.+.|.+.++..++.++++..
T Consensus 141 ~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~ 188 (524)
T PF05977_consen 141 NALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLR 188 (524)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998888888898888776665544433
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.69 E-value=1.5e-14 Score=152.13 Aligned_cols=178 Identities=10% Similarity=-0.103 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.+|......++...+...+.++++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+.++.+.+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVL 81 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 467777788888888888889999999999999999999999999999999999999999998 9999998877666554
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
......... .+. ........+++++++.|++.+...+....+..|..+ + ++.
T Consensus 82 ~~~~~~~~~----~~~----------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~ 133 (396)
T TIGR00882 82 FAPFFIYVF----GPL----------------LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNF 133 (396)
T ss_pred HHHHHHHHh----hhH----------------HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------ccc
Confidence 443221100 000 000123345566788888888888887777766432 2 334
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
.++......++|..++|.+++.+.+ .+|+..|++.+++.++..++.+
T Consensus 134 ~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 134 EYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred ccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHH
Confidence 5566667788999999999998755 5899999888776665554443
No 80
>PRK10133 L-fucose transporter; Provisional
Probab=99.68 E-value=5.6e-14 Score=150.10 Aligned_cols=156 Identities=13% Similarity=-0.032 Sum_probs=125.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+++...++.+.+..++..+........ .+.+++++|.+..+.++..+.+.++..++.++.|+++||+ |||+++.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~ 99 (438)
T PRK10133 22 RSYIIPFALLCSLFFLWAVANNLNDIL-LPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLF 99 (438)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 334456666666666666666544444 4456899999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
++.++.+++..... . .+...++++|++.|+|.|...+...+++.|..++++
T Consensus 100 ~~~~~~~l~~~~~~------a-------------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~---- 150 (438)
T PRK10133 100 LYALGAALFWPAAE------I-------------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS---- 150 (438)
T ss_pred HHHHHHHHHHHHHh------c-------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh----
Confidence 99999887642211 0 467889999999999999999999999999766655
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhh
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~ 253 (540)
|...+++++....+|..++|.+++.+.
T Consensus 151 --~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 151 --GHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666678888888888888888876543
No 81
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.68 E-value=6.4e-14 Score=151.84 Aligned_cols=176 Identities=14% Similarity=0.113 Sum_probs=133.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc----cchHHH-HHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWT-IAIF 142 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~----~GR~~~-i~i~ 142 (540)
+|+.+.+++..+...+..+.....++.++. +.|.+..+.+.. +..... +++.+++|+++||+ +|||+. +.++
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~ 87 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLAT 87 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHH
Confidence 334566666667777777666677777765 559998888876 222222 36889999999994 288886 5566
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 009195 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (540)
Q Consensus 143 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (540)
.++..++...+++.. |. .+...+.+.+++.+++.+...+...++.+|.+|+++
T Consensus 88 ~i~~~~~~~~~a~~~------~~-------------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~-- 140 (491)
T PRK11010 88 QLLLLVAIAAMGFLE------PG-------------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE-- 140 (491)
T ss_pred HHHHHHHHHHHHHcC------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh--
Confidence 666666666655431 11 356778888899999999999999999999999888
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh-ccchHHHHHHHHHHHHHHHHHHH
Q 009195 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 223 ~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~-~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
|+++.++...+..+|..+++.+++++.+ ..|||..|++.++..++..+..+
T Consensus 141 ----rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 141 ----RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988 46999999988776665544433
No 82
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.67 E-value=2.1e-14 Score=148.67 Aligned_cols=158 Identities=16% Similarity=0.099 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
.+...+..++.....+...+.++.++++++|++..+.+++.+.+.++..++.+++|+++||+ |||++++++.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 44566666666777777777777789999999999999999999999999999999999998 99999999999999998
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccch-hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSW-QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
+++.++ . +...++++|++.|++.+. .....++++|.+|+++ |++
T Consensus 82 ~~~~~~----------------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~ 126 (366)
T TIGR00886 82 LWAGLA----------------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGT 126 (366)
T ss_pred HHHHHH----------------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhH
Confidence 888775 4 577888999999999665 4566789999999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhh----------ccchHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGA 264 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~----------~~gw~~~f~i 264 (540)
..+++....++|..+++.+++.+.. +.+||+.|++
T Consensus 127 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 127 ALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 9999887777787777777765543 2479999844
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.67 E-value=4.4e-14 Score=168.30 Aligned_cols=146 Identities=14% Similarity=0.056 Sum_probs=111.7
Q ss_pred HHHhhCCCh-HHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH--HHHHHHHhhhccccCCCCCccccc
Q 009195 96 MFYVMHKSF-ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA--GLTGITLCATMKVFMPNQDNCDRI 172 (540)
Q Consensus 96 l~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i--~~~~~~~~~~~~~~~~~~~~~~~~ 172 (540)
+....+.+. ...+++.+++.+...++.+++|+++||+ |||+++.....+.++ ...+..+. .
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~-~-------------- 105 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFH-L-------------- 105 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHH-H--------------
Confidence 333444433 4467788889999999999999999998 999986442222222 21111111 0
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHh
Q 009195 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI 252 (540)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l 252 (540)
.+.+.++++|+++|++.+...+...+++.|++++++ |+.++++.+.+.++|.++||.+++++
T Consensus 106 ------------~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l 167 (1140)
T PRK06814 106 ------------NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLA 167 (1140)
T ss_pred ------------hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999988 99999999999999999999999999
Q ss_pred hhccchHHHHHHHHHHHHHHHHH
Q 009195 253 QMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 253 ~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
....+|++.|.+.++..++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~ 190 (1140)
T PRK06814 168 TISGNFVILVALLMGIAVLGWLA 190 (1140)
T ss_pred HhccccHHHHHHHHHHHHHHHHH
Confidence 99999999884444444444433
No 84
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.65 E-value=5.5e-14 Score=146.17 Aligned_cols=165 Identities=18% Similarity=0.209 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhC--CChHHHHHHHHH--HH---HHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 81 ERMAYFGLSVNMVTFMFYVMH--KSFADSSNAVNN--FL---GISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (540)
Q Consensus 81 ~~~~~~~~~~~~~~yl~~~lg--~~~~~~~~~~~~--~~---~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~ 153 (540)
+.+..+.+. +...++.++.. .++++.+...+. +. ++..++.++.|+++||+ |||+++.++.++..++.+++
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 5 EWFDFYLYG-FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred hHHHHHHHH-HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHH
Confidence 344444333 34555555544 334444433332 22 33346789999999998 99999999999999988888
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHH
Q 009195 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (540)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~ 233 (540)
+++.+.... .......++++|++.|++.+...+....+++|.+|+++ |++..++
T Consensus 83 ~~~~~~~~~--------------------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~ 136 (394)
T TIGR00883 83 GLLPSYATI--------------------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSF 136 (394)
T ss_pred hhCCChhhh--------------------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHH
Confidence 775210000 00112357889999999999999999999999999988 9999999
Q ss_pred HHHHHhHHHHHHHHHHHHhh--------hccchHHHHHHHHHHHHHHH
Q 009195 234 FYLSVTVGAIVAFTLVVYIQ--------MEHGWGSAFGALAIAMGISN 273 (540)
Q Consensus 234 ~~~~~~lg~~i~p~i~~~l~--------~~~gw~~~f~i~~i~~~~~~ 273 (540)
.+.+..+|..+++.++..+. +..+||+.|.+.++..+++.
T Consensus 137 ~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 137 QQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 99999999999988776653 35689999987666554443
No 85
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.64 E-value=2.6e-14 Score=142.21 Aligned_cols=160 Identities=12% Similarity=-0.001 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 009195 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~ 158 (540)
.+.-...-.....+..-+....|.+.-+..++......++.+++..+|.++|++ |||+...+......+.-.+-..+
T Consensus 87 wmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s-- 163 (528)
T KOG0253|consen 87 WMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS-- 163 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC--
Confidence 333333334445555566777888888999999999999999999999999998 99999888776555544443332
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHH
Q 009195 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (540)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~ 238 (540)
.|...+++.|.+.|+|.|+ .|...++-.|..|... |....-.. ...
T Consensus 164 --------------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~w 209 (528)
T KOG0253|consen 164 --------------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFW 209 (528)
T ss_pred --------------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHH
Confidence 4678899999999999999 8999999999999887 77766554 445
Q ss_pred hHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 239 ~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
.+|.++...+.-.+..+.||||-.........++.++
T Consensus 210 aig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f 246 (528)
T KOG0253|consen 210 AIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF 246 (528)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH
Confidence 6777777777766677889998776655444444333
No 86
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=9.4e-15 Score=158.35 Aligned_cols=182 Identities=13% Similarity=0.034 Sum_probs=133.8
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+++|+.........++..+.+|++..+++.|+++.+|++..+..+......++..++.+++|+++||+ |||+++.++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~ 324 (490)
T PRK10642 246 TKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSV 324 (490)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 34555555555555667788889999999999999999988888888888888999999999999998 99999888876
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..++.+++..... . .+...+++++++.|++.++..+....+++|.+|++.
T Consensus 325 ~~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~---- 375 (490)
T PRK10642 325 ALFVLAIPAFILIN-----S--------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI---- 375 (490)
T ss_pred HHHHHHHHHHHHHh-----C--------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc----
Confidence 55444333222111 0 235567778888888877777778888999999999
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~ 278 (540)
|++++++.+....+++.++|.+.+++.+..+ |+.++++..+..+++++..++
T Consensus 376 --Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 376 --RYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999998444455667889999999887654 676666555555444444443
No 87
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=4.9e-13 Score=142.03 Aligned_cols=161 Identities=14% Similarity=0.003 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-HHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWTIAIFTTIYLAGL 150 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR-~~~i~i~~~l~~i~~ 150 (540)
..+.+..++...++-...++++.|+++++|++..+.+++.+.+.++..++++++|+++||+ || |+++.++.++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~ 83 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLL 83 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHH
Confidence 4456666666666666678999999999999999999999999999999999999999997 65 778888777776666
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhh--------ccCCCCCch
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGA--------DQFDERSKD 222 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~--------d~~~~~~~~ 222 (540)
.+..+. .+...+++.+++.|++.+...+...+... |......
T Consensus 84 ~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-- 133 (418)
T TIGR00889 84 FFAAQV----------------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP-- 133 (418)
T ss_pred HHHHHh----------------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC--
Confidence 665543 34666777888888877666555444321 2222122
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (540)
Q Consensus 223 ~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~ 274 (540)
|.+.++ .+|.+++|.+++.+.....|. +|++.++..++..+
T Consensus 134 ----~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~ 174 (418)
T TIGR00889 134 ----PIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGV 174 (418)
T ss_pred ----Ceeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHH
Confidence 444443 378888888888874433354 35555554444433
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.62 E-value=2.1e-13 Score=147.88 Aligned_cols=152 Identities=15% Similarity=0.137 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 009195 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (540)
Q Consensus 90 ~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 169 (540)
.....++.+++|-+ ....|+.+.+.++..+..++.|.|||.+ |||..++++.++.++|.+.++.+
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA------------- 128 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA------------- 128 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC-------------
Confidence 44567888899886 4567788889999999999999999976 99999999999999999999876
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 009195 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (540)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~ 249 (540)
++...++++..+.|+|.|... .....++|..|.+. |..+..+..+...+...+++.++
T Consensus 129 ---------------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia 186 (599)
T PF06609_consen 129 ---------------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIA 186 (599)
T ss_pred ---------------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHH
Confidence 678899999999999977665 45666899999988 88877776666556666777777
Q ss_pred HHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 250 VYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 250 ~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
..+..+.+|||.|++..+...+++++.++
T Consensus 187 ~~~~~~~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 187 QLFAAHSGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HHhccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 77766778999999998877666554433
No 89
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.62 E-value=3.8e-13 Score=140.93 Aligned_cols=155 Identities=8% Similarity=-0.021 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH----HHHHHHHHHHHHHHHHHH
Q 009195 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY----WTIAIFTTIYLAGLTGIT 154 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~----~~i~i~~~l~~i~~~~~~ 154 (540)
++..++...+.++++.|++ ++|.+..+.+++.+++.++..++.+++|+++||+ ||+ +.+.+...+.. +.+.
T Consensus 14 ~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~---~~~~ 88 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA---VAFW 88 (382)
T ss_pred HHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH---HHHH
Confidence 3344445556677888885 5899999999999999999999999999999998 984 33222221111 1111
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHH
Q 009195 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF 234 (540)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~ 234 (540)
.. . ++.+.+++.|++.|++.+...+...++..+.. ++ |++.++..
T Consensus 89 ~~--------~-------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~--~~------~~~a~~~~ 133 (382)
T PRK11128 89 FG--------A-------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTWQ--KQ------IGLDYGKV 133 (382)
T ss_pred Hh--------c-------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHHH--hh------ccCCcchH
Confidence 11 0 35777888999999998888888777777752 23 66667777
Q ss_pred HHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 235 YLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (540)
Q Consensus 235 ~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~ 273 (540)
....++|..+||.+++++.+++|||..|++.++..++..
T Consensus 134 ~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 134 RLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML 172 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 777789999999999999999999999987765544433
No 90
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.62 E-value=1e-13 Score=154.22 Aligned_cols=208 Identities=14% Similarity=0.088 Sum_probs=152.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
..+++.+...+....+......+......+.+.++++++.++.+++.+.+.++..++.++.|+++||+ |||+.+.++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~l 106 (633)
T TIGR00805 28 FSKIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCA 106 (633)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHH
Confidence 34555554444444444444456666677788899999999999999999999999999999999997 99999999999
Q ss_pred HHHHHHHHHHHhhhcccc--------------CCCCCccccccc-------ccCCCCCcc--chhHHHHHHHHHHHHHhh
Q 009195 145 IYLAGLTGITLCATMKVF--------------MPNQDNCDRISQ-------LLGSCEPAK--SWQMLYLYTVLYITGFGA 201 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~--------------~~~~~~~~~~~~-------~~~~~~~~~--~~~~~~~~~~~~l~g~g~ 201 (540)
++.+|.++++++.....- ..+.+.|...+. ....|.... ......++++|++.|+|.
T Consensus 107 l~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~ 186 (633)
T TIGR00805 107 IMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA 186 (633)
T ss_pred HHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC
Confidence 999999998875311000 000112311000 001232222 123567789999999999
Q ss_pred cccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhcc----------------------chH
Q 009195 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH----------------------GWG 259 (540)
Q Consensus 202 g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~----------------------gw~ 259 (540)
+...+...+++.|.+|+++ |+..+++++.+..+|+++|+++++++.+.+ +|+
T Consensus 187 ~~~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWw 260 (633)
T TIGR00805 187 TPIFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWW 260 (633)
T ss_pred CcchhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHH
Confidence 9999999999999999998 999999999999999999999999887542 277
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 009195 260 SAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 260 ~~f~i~~i~~~~~~~~~~~~ 279 (540)
.+|++.+++.++..+.+++.
T Consensus 261 l~Fli~g~l~~l~~v~l~~~ 280 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFF 280 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 77877776665555444443
No 91
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=3.3e-15 Score=152.09 Aligned_cols=178 Identities=22% Similarity=0.242 Sum_probs=147.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhcc-chHHHH-HHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWTI-AIFTTIY 146 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~-GR~~~i-~i~~~l~ 146 (540)
+.+|.+.++.++..+..|++..+.|.|+.+..|++..++.+..+.|..+...|++++||+|||++ |||... ++++++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999998 777554 4555555
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
++..+.+..+ |+ .+..+..+..+++|+...++...+.....|..|++.
T Consensus 332 ~~~~~~~w~~-------~~-------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------ 379 (448)
T COG2271 332 TASLVLYWLA-------PN-------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------ 379 (448)
T ss_pred HHHHHHHHcC-------CC-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------
Confidence 5555555443 22 456777788899999999999899999999999888
Q ss_pred hhhHHHHHHHHHhH-HHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 227 R~~~~~~~~~~~~l-g~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
-|++.++..+...+ |+.++....+++.+.+||...|.+..+..+++.+++..
T Consensus 380 aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 380 AGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred ccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 67777776666656 88888888899989899999999887777666665544
No 92
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.62 E-value=7e-13 Score=140.44 Aligned_cols=172 Identities=11% Similarity=0.021 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
++.+...-++..+.. ++...+.+.+++++|.+..+.+++.+.+.++..++.++.|++.||+ |||+++.++.++..++.
T Consensus 5 ~~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 444444444444444 4555556777999999999999999999999999999999999998 99999999999999988
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+++..+.. . .+...++++|++.|+|.|...+...+++.+..|+++ |++.
T Consensus 83 ~l~~~~~~------~-------------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~ 131 (410)
T TIGR00885 83 FLFWPAAE------I-------------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRR 131 (410)
T ss_pred HHHHHHHh------h-------------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHH
Confidence 77654321 0 357788899999999999999999999999998887 8888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhh--------------------------ccchHHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQM--------------------------EHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~--------------------------~~gw~~~f~i~~i~~~~~~~~ 275 (540)
.++.+...++|..++|.+++.+.. ..+||++|.+.++..++..++
T Consensus 132 ~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 132 LNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888999999999999887742 236999998776655444333
No 93
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.62 E-value=1.1e-12 Score=138.30 Aligned_cols=165 Identities=15% Similarity=0.128 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc----cchHH-HHHHHHHHHHHHHH
Q 009195 77 NEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYW-TIAIFTTIYLAGLT 151 (540)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~----~GR~~-~i~i~~~l~~i~~~ 151 (540)
..+.+.+.+.-....+|.|+.+ .|++.++.+++..+... .+..+++|+++||+ +|||| .+.++.++..+...
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 3344445554455667888875 59999999988666655 68889999999996 27765 67777777776666
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
.+++.. +. .+...+++..++.+++.+...+...++++|.+|+++ |+++.
T Consensus 84 ~l~~~~------~~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~ 132 (402)
T PRK11902 84 AMAFCP------PH-------------------AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGA 132 (402)
T ss_pred HHHhcC------cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHH
Confidence 655531 11 245556666667788888888999999999999988 99999
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~-~gw~~~f~i~~i~~~~~~~~ 275 (540)
++...+..+|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 133 ~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 133 AVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 998888999999999999988875 49999999877766554443
No 94
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.61 E-value=1e-13 Score=143.58 Aligned_cols=143 Identities=16% Similarity=0.136 Sum_probs=120.4
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 009195 91 NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (540)
Q Consensus 91 ~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
.+.+.+.+++|++.++.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+.+ .+
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~-------------- 84 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA-------------- 84 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh--------------
Confidence 345567789999999999999999999999999999999998 99999999988877777665 32
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Q 009195 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (540)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~ 250 (540)
.+...+++.|++.|++.+...+..+....|.+| ++ |++.+++++.+.++|..+++.+++
T Consensus 85 --------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~ 143 (355)
T TIGR00896 85 --------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATV 143 (355)
T ss_pred --------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677889999999999888888888888886 46 899999999999999999999998
Q ss_pred Hhhhcc--chHHHHHHHHHHHH
Q 009195 251 YIQMEH--GWGSAFGALAIAMG 270 (540)
Q Consensus 251 ~l~~~~--gw~~~f~i~~i~~~ 270 (540)
++.+.. +||+.|.+.++..+
T Consensus 144 ~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 144 PLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHhhhhhHHHHHHHHHHHHH
Confidence 887765 39988876655433
No 95
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.61 E-value=1.2e-13 Score=146.93 Aligned_cols=172 Identities=15% Similarity=0.126 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHH-HHHHHHHHHHHHHHHHH
Q 009195 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYW-TIAIFTTIYLAGLTGIT 154 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~-~i~i~~~l~~i~~~~~~ 154 (540)
+..++....+..+++.|+++.+|++..+++++.++..+...+..|+.|+++||. +|||| .++++.++..++.+++.
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~ 88 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF 88 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH
Confidence 444555556677889999999999999999999999999999999999999984 48755 56677777777776665
Q ss_pred HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC-CCCchhhhhhhhHHHH
Q 009195 155 LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLDRFFNF 233 (540)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~-~~~~~~~~~R~~~~~~ 233 (540)
.... .. .......+++.+++.+++.+.......++.+|+.+ +++ |++..++
T Consensus 89 ~~~~---~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~ 140 (437)
T TIGR00792 89 TTPD---FS-------------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTF 140 (437)
T ss_pred hCCC---CC-------------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHH
Confidence 4311 00 00234556667778888888877778888999885 344 8888888
Q ss_pred HHHHHhHHHHHHHHHHHHhh-------hccchHHHHHHHHHHHHHHHHHHHH
Q 009195 234 FYLSVTVGAIVAFTLVVYIQ-------MEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 234 ~~~~~~lg~~i~p~i~~~l~-------~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
.....++|..+++.+.+.+. +..+|++.+.+.+++.++..++.+.
T Consensus 141 ~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~ 192 (437)
T TIGR00792 141 RRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFF 192 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888777766655543 2457999888777766555544433
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.57 E-value=3.4e-12 Score=136.33 Aligned_cols=197 Identities=12% Similarity=0.065 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhh----ccchHHHHHHH-HH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADA----YLGRYWTIAIF-TT 144 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~----~~GR~~~i~i~-~~ 144 (540)
.++.+....+...+++-...++++.|+ +.+|.+....+++..+..+...+..++.|++||| + ||||.++++ .+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHH
Confidence 445555556666666655666666665 6899999999999999999999999999999995 6 999998875 44
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
...++.++++.+.....+... . ..+.........+.++..+..++.....+...++++|++|+++++
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~----------~-~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~-- 149 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGD----------N-LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR-- 149 (477)
T ss_pred HHHHHHHHHHhCchhhhhccc----------c-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH--
Confidence 455555555544221100000 0 000000011133444555566777778888899999999988621
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHh--hhc-------------cchHHHHHHHHHHHHHHHHHHHHhcccc
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYI--QME-------------HGWGSAFGALAIAMGISNMLFFIGTPLY 283 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l--~~~-------------~gw~~~f~i~~i~~~~~~~~~~~~~~~~ 283 (540)
++.+.++.+...++|..+|+.++++. .+. .+.++.|++.+++.++..++..+..++.
T Consensus 150 --~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 150 --TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 35788889999999999999988865 221 1578889988887777766665554443
No 97
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.54 E-value=9.8e-13 Score=131.98 Aligned_cols=116 Identities=16% Similarity=0.075 Sum_probs=104.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCc
Q 009195 103 SFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA 182 (540)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (540)
+..-++.+-+.|.+...+.++++|.+|||+ |||+++++|.+...+.+++++.+
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S-------------------------- 118 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS-------------------------- 118 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH--------------------------
Confidence 445678999999999999999999999998 99999999999999988888876
Q ss_pred cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 183 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
.|+..+.++|++.|+.-|- ...+-++++|.+++++ |+.+++....+..+|..+||.|++++..
T Consensus 119 --~~F~afv~aR~l~Gi~kgn-l~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 119 --RNFAAFVLARFLGGIFKGN-LSVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred --HHHHHHHHHHHhhhhccCc-hHHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 5676777789999999876 4677899999999988 9999999999999999999999999987
No 98
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.51 E-value=9.7e-13 Score=137.82 Aligned_cols=172 Identities=12% Similarity=0.026 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH-HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD-SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
....+++-.|+..+-- ..+++.+|+.+++|++.++ .+.+.+.+..++.++.+++|+++||+ |-|+++.++.+...+
T Consensus 28 ~~~~lC~fGF~~e~R~--n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 28 LVLYLCFYGFMAQFRP--GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHHHHhhc--hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 3333444444443332 3456677999999999999 99999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
..+++.++ .+...+.+.|++.|++.|+.. ....++..++|+++ |+
T Consensus 105 ~t~L~~fa----------------------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ 149 (511)
T TIGR00806 105 VWLLLLLG----------------------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQ 149 (511)
T ss_pred HHHHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HH
Confidence 98888886 467889999999999999999 99999999999988 99
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHH---HHHHHHHHHHHHHHHhc
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFG---ALAIAMGISNMLFFIGT 280 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~---i~~i~~~~~~~~~~~~~ 280 (540)
++.+++..+..+|.++++++++++ ..+||++-+. +......+++++.++.+
T Consensus 150 ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 150 RAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999994 4678987554 45555566666655543
No 99
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.51 E-value=5.9e-12 Score=135.96 Aligned_cols=175 Identities=15% Similarity=0.086 Sum_probs=140.9
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSV---NMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~---~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
|.++++.|+.++..+++.. .+-..++++++.+..+.+++.++......+..|+.+.+.||+ |.|.+.+.+.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 5556666666666655432 345567889999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHH-HHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
|+++.+++ .+.+.+++.. ++.|+|.|.........++..|++ . |
T Consensus 124 g~~lssF~----------------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~k-k------R 168 (509)
T KOG2504|consen 124 GLLLSSFA----------------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEK-K------R 168 (509)
T ss_pred HHHHHHHH----------------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHH-H------H
Confidence 99999887 4566666554 789999999998888888877774 3 7
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
+.+.++-..+..+|..+-|.+..++.+.+|||..+++...+.+-..+.....++.
T Consensus 169 ~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~ 223 (509)
T KOG2504|consen 169 ALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPL 223 (509)
T ss_pred HHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 7888777777888888888999999999999999988777775555555555543
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.48 E-value=1.5e-11 Score=132.59 Aligned_cols=177 Identities=8% Similarity=-0.011 Sum_probs=127.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-----hHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYWTIAIFTT 144 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~G-----R~~~i~i~~~ 144 (540)
....+....+.+.+. +.+...+..++++++|++.++.+...+...+...+-++ +|+++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHH
Confidence 334444466777777 67777788899999999999998888888888888765 99999998 6 6777777765
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+.. ......++.. + .......+.+++.+++.+.......++..|..+ ++++
T Consensus 104 l~~-~~~~~~l~~~-----~--------------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~-- 154 (468)
T TIGR00788 104 LGS-AILYGLLPGK-----V--------------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS-- 154 (468)
T ss_pred HHH-HHHHHhcccc-----c--------------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC--
Confidence 542 1111222100 1 123334446788999999999999999999998 4321
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
.++...++.+...++|..+++.+++++.+..+|+..|++.++..++..+...+.
T Consensus 155 -~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~ 208 (468)
T TIGR00788 155 -AGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS 208 (468)
T ss_pred -cCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhc
Confidence 134455566666789999999999999999999999998887776664443433
No 101
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.48 E-value=1.8e-12 Score=139.74 Aligned_cols=177 Identities=16% Similarity=0.078 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
+.+|.+.+..++....++++..++|.|+++.+|++..++++..+...++..++.+++|+++||+ |||+.+.+...+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 3577777888888888888888999999999999999999999999999999999999999998 998877665444443
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
+...+.+... .+....++.+++.|++..+..........|.+|++. |+
T Consensus 337 ~~~~~~~~~~--------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g 384 (467)
T PRK09556 337 IFTLGVYQHA--------------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IG 384 (467)
T ss_pred HHHHHHHHhc--------------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HH
Confidence 3322222100 234445566777776554444444466779999988 99
Q ss_pred hHHHHHHHHHhH-HHHHHHHHHHHhhh------------ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFYLSVTV-GAIVAFTLVVYIQM------------EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 229 ~~~~~~~~~~~l-g~~i~p~i~~~l~~------------~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
++.++.+...++ |+.++|.+.|++.+ ..||+..|++..++.+++.+..++
T Consensus 385 ~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 385 VANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 999999888886 77999999999999 578999998887777766555443
No 102
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=1.4e-12 Score=131.72 Aligned_cols=152 Identities=13% Similarity=0.058 Sum_probs=136.0
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCC
Q 009195 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGS 178 (540)
Q Consensus 99 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (540)
.++-++++.+++.....+...+..++.|.+.||+ |+|-.++++.++.....+++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 4566788999999999999999999999999998 99999999999999999998885
Q ss_pred CCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 179 CEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 179 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
.+..+++++|.++|+|.++...+..++++|.||++.. |++.+++.--...+|-.+||.++|.+.+..|.
T Consensus 157 ------~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk 225 (464)
T KOG3764|consen 157 ------NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGK 225 (464)
T ss_pred ------chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCC
Confidence 4678899999999999999999999999999998774 89999998888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccc
Q 009195 259 GSAFGALAIAMGISNMLFFIGTPLYR 284 (540)
Q Consensus 259 ~~~f~i~~i~~~~~~~~~~~~~~~~~ 284 (540)
+.+|.+.+++.++-..+-++..+..+
T Consensus 226 ~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 226 SAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred cCcHHHHHHHHHHHHHHHHheeCccc
Confidence 99999999888777766666554443
No 103
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=2.7e-11 Score=123.21 Aligned_cols=136 Identities=16% Similarity=0.105 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 009195 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (540)
Q Consensus 87 ~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~ 166 (540)
.....+.+++++.++.+..+++++...+..++.+.++..|++.+|+ |+|+.++++..++++|..+..-++..
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~lF~pAa~~------- 101 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAALFWPAASS------- 101 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHHHhhhhhh-------
Confidence 4556678899999999999999999999999999999999999998 99999999999999999888655321
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 009195 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (540)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p 246 (540)
.++..++++.++.|.|.+.......++++.+.+++. -.+-+++.+....+|+.++|
T Consensus 102 ------------------~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lGa~~gp 157 (422)
T COG0738 102 ------------------KSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLGAILGP 157 (422)
T ss_pred ------------------hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhHHHHHH
Confidence 568889999999999999999999999999999865 55556677777889999999
Q ss_pred HHHHHhhh
Q 009195 247 TLVVYIQM 254 (540)
Q Consensus 247 ~i~~~l~~ 254 (540)
.+++++..
T Consensus 158 ~~g~~lil 165 (422)
T COG0738 158 LLGSSLIL 165 (422)
T ss_pred HHHHHHHH
Confidence 99988766
No 104
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=5.4e-12 Score=132.78 Aligned_cols=172 Identities=11% Similarity=0.080 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
+..+...++....++....+++.|+++++|++..+.+.+.+...++..++.+++|+++||+ |||+.+..+.+...+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~ 297 (393)
T PRK15011 219 LLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYA 297 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHH
Confidence 3333333444444555566788999999999999999888877777888899999999997 999988777655554433
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
.+... .+...+++.+++.+++.|...+....+..|.+|+ . |+++.
T Consensus 298 ~~~~~----------------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~ 342 (393)
T PRK15011 298 GMLMA----------------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSAT 342 (393)
T ss_pred HHHHH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHH
Confidence 33222 2345556677777777776666777788898874 4 78899
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
++++...++|..++|.+++++.+..||+..|++..++.++++++.+..
T Consensus 343 ~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 343 TLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 998888899999999999999998899999988777777766665543
No 105
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.47 E-value=1.1e-10 Score=117.19 Aligned_cols=173 Identities=18% Similarity=0.150 Sum_probs=145.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
|..+..++++.+--+-.+.++. .+...+.+++|.+.+.+++..++-.+...+..++..+++-|+ |-.+.+..++++..
T Consensus 11 ~~li~gIvlia~NLR~~itsvg-PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~ 88 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVG-PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIA 88 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhh-hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHH
Confidence 4455556666666666665544 456678899999999999999999999999999999999997 99999999999888
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
+|.++=.. .+...++.+-.+.|.|.+......|+.+-+-||++.
T Consensus 89 ~G~~iR~~-----------------------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~------- 132 (395)
T COG2807 89 AGILIRSL-----------------------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRV------- 132 (395)
T ss_pred HHHHHHhc-----------------------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccch-------
Confidence 88776544 245678888999999999999999999999999764
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHHHHHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~-gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+..+++|..+..+|+.+++.+...+.++. ||+..+.+.+...++++++++.
T Consensus 133 ~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 133 GLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred hhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhh
Confidence 78888999999999999999999998877 7999999988888888777654
No 106
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.45 E-value=2.6e-11 Score=125.47 Aligned_cols=157 Identities=13% Similarity=0.118 Sum_probs=117.2
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc----cchHHHH-HHHHHHHHHHHHHHHHhhhccccC
Q 009195 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY----LGRYWTI-AIFTTIYLAGLTGITLCATMKVFM 163 (540)
Q Consensus 89 ~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~----~GR~~~i-~i~~~l~~i~~~~~~~~~~~~~~~ 163 (540)
.....+.+.+++|++.++.++.... .+...+ .+++|+++||+ +||||.+ +.+.++..+....+++..
T Consensus 7 ~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~------ 78 (356)
T TIGR00901 7 VGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV------ 78 (356)
T ss_pred HHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC------
Confidence 3444455667889999999988655 333333 78999999997 4899975 455665555555544331
Q ss_pred CCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHH
Q 009195 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (540)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~ 243 (540)
+. .+...+....++.+++.+...+...++++|++|+++ |+.+.++...+.++|..
T Consensus 79 ~~-------------------~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~ 133 (356)
T TIGR00901 79 PS-------------------TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGML 133 (356)
T ss_pred cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHH
Confidence 11 244455556667788888888999999999999888 99999999999999999
Q ss_pred HHHHHHHHhhhccc--------hHHHHHHHHHHHHHHHHHHHH
Q 009195 244 VAFTLVVYIQMEHG--------WGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 244 i~p~i~~~l~~~~g--------w~~~f~i~~i~~~~~~~~~~~ 278 (540)
+++.+++++....| ||..|++.++..+++.+..++
T Consensus 134 ~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 134 LSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888 999999888876665554443
No 107
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.44 E-value=3.5e-12 Score=136.62 Aligned_cols=148 Identities=11% Similarity=0.062 Sum_probs=122.6
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccc
Q 009195 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQL 175 (540)
Q Consensus 96 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (540)
+.++++....+.+.+.++|.++++++.+++|.|.||+ .-.+.+..+.++..+..++....
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~------------------- 131 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV------------------- 131 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 3467888888999999999999999999999999998 86666665555554444333332
Q ss_pred cCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh--
Q 009195 176 LGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ-- 253 (540)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~-- 253 (540)
+|...+++.|++.|+..++..|+...+++.++.+++ |+.-+++++....+|.++|.+++..+.
T Consensus 132 ---------~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~ 196 (495)
T KOG2533|consen 132 ---------HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKL 196 (495)
T ss_pred ---------hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhh
Confidence 678899999999999999999999999999999998 999999999999999999999988863
Q ss_pred ----hccchHHHHHHHHHHHHHHHHHHHH
Q 009195 254 ----MEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 254 ----~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
...||||.|.+..++.++..++.++
T Consensus 197 ~~~~~~~gW~~~FiI~G~i~~~~gi~~f~ 225 (495)
T KOG2533|consen 197 NGSGGLAGWRWLFIIEGVITLVLGIVVFF 225 (495)
T ss_pred cCCCCcCCceeehhHHHHHHHHHHheEEE
Confidence 3468999999988776655554444
No 108
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=1.3e-11 Score=131.91 Aligned_cols=183 Identities=12% Similarity=-0.003 Sum_probs=133.1
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
++++.........++..+.+|.+.++++.|+++.+|++......+.........++.++.|+++||+ |||++++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~ 325 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALI 325 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 3444444445556677788888889999999999999887665555566666778888999999998 999998888766
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..++.+++..... .. .....+++..++.+++.+...+...++++|.+|++.
T Consensus 326 ~~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~----- 376 (438)
T PRK09952 326 GTLSAFPFFMALE-----AQ-------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY----- 376 (438)
T ss_pred HHHHHHHHHHHHH-----cC-------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch-----
Confidence 5554443333210 00 123334445566678888778888999999999988
Q ss_pred hhhhHHHH-HHHHHhHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHHHHHHh
Q 009195 226 HLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEH--GWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 226 ~R~~~~~~-~~~~~~lg~~i~p~i~~~l~~~~--gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
|+++.++ +..+..+|++++|.+.+++.+.. +|...+.+.+++.+++.+..+..
T Consensus 377 -r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 377 -RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred -hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 9999998 55566789999999999998744 48888877777766666655443
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.41 E-value=7.5e-11 Score=127.35 Aligned_cols=172 Identities=10% Similarity=-0.028 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhh----hccch-HHHHHHHHHHHHHH
Q 009195 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGR-YWTIAIFTTIYLAG 149 (540)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD----~~~GR-~~~i~i~~~l~~i~ 149 (540)
.+..+..++....+..+++.|+++.+|++...++.+..+..+...+..|+.|+++| |+ || |+.++++.+...++
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~ 90 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVV 90 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHH
Confidence 34555666777777888999999999999999999999999999999999999999 55 98 55555666666666
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC-CCCchhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~-~~~~~~~~~R~ 228 (540)
.+++... |+ .+.......+++..++.+++.........++.+|+.+ +++ |.
T Consensus 91 ~~llf~~-------p~---------------~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~ 142 (473)
T PRK10429 91 LFLLFSA-------HL---------------FEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------RE 142 (473)
T ss_pred HHHHHcC-------CC---------------CCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HH
Confidence 5555432 10 0000223444555566778888888888899999985 444 88
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhh-------ccchHHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~-------~~gw~~~f~i~~i~~~~~~~~ 275 (540)
+..++-....++|+.+.+.+...+.. ..+|+....+.++..++..+.
T Consensus 143 ~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 143 QLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888666667766655554443321 124555555554444443333
No 110
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.40 E-value=3.1e-10 Score=119.14 Aligned_cols=178 Identities=11% Similarity=-0.016 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHH--HHHHHHHHHHHhHH-HHHhhhccchHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAV--NNFLGISQASSVLG-GFLADAYLGRYWTIAIFTTIYL 147 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~--~~~~~~~~~~~~~~-G~lsD~~~GR~~~i~i~~~l~~ 147 (540)
...++..-+.+.+.+..+.+.++.|++ +.|.+.++.+... ......-.+..++. ++++||+ ||||.+++...+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 344555667777777667777887876 5699999999863 44455555555555 6689987 99999766653322
Q ss_pred H-HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 148 A-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 148 i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
. ....+... . +. ......+....++.++..+...+...++..|..++++
T Consensus 81 ~~~~~~~~~~--~----~~------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------ 130 (390)
T TIGR02718 81 SACLASLALV--G----PD------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------ 130 (390)
T ss_pred HHHHHHHHcC--C----cc------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------
Confidence 2 22222211 0 00 0112233344455566666667777777788777666
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~ 280 (540)
++...+....+..+|..+|+.+.+++.++.|||..|++.++..++..+..+...
T Consensus 131 ~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~ 184 (390)
T TIGR02718 131 LAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLK 184 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 777777777777899999998888999999999999998887766555544433
No 111
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.40 E-value=4.1e-12 Score=132.04 Aligned_cols=174 Identities=14% Similarity=0.052 Sum_probs=132.6
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
++++..+......++....++.+..+++.|+++++|.+..+.+.......++..++.+++|+++||+ |||+.+.++..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~ 294 (394)
T TIGR00883 216 KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVL 294 (394)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHH
Confidence 3334566666777777788888888999999999999999999999999999999999999999998 999988766554
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..+..++...... .. .+...++...++.|++.+...+...++++|.+|++.
T Consensus 295 ~~~~~~~~~~~~~-----~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~----- 345 (394)
T TIGR00883 295 AALLAVPLLMALL-----DS-------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV----- 345 (394)
T ss_pred HHHHHHHHHHHHh-----cC-------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc-----
Confidence 4433221111100 00 234455666778888888888999999999999988
Q ss_pred hhhhHHHH-HHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHH
Q 009195 226 HLDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMG 270 (540)
Q Consensus 226 ~R~~~~~~-~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~ 270 (540)
|++++++ +.++..+|..++|.+++++.++.| |++.++..+++.+
T Consensus 346 -~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 346 -RYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred -eeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 8888888 556677899999999999999888 8877666554433
No 112
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=1.5e-11 Score=138.05 Aligned_cols=134 Identities=9% Similarity=0.002 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHH
Q 009195 109 NAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQML 188 (540)
Q Consensus 109 ~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (540)
+...+..++..++.+++|+++||+ |||++++++.++..++.+++++. .+..
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~----------------------------~s~~ 649 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG----------------------------NSES 649 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH----------------------------ccHH
Confidence 334556688889999999999998 99999999988888887776654 2344
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 189 YLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 189 ~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
.+++.+++.|++.++..+...++++|++|++. |++++++.+....+|++++|++++++... +...+|++.+++
T Consensus 650 ~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~ 722 (742)
T TIGR01299 650 AMIALLCLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAA 722 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHH
Confidence 55666778888888888889999999999988 99999999999999999999999988764 455677776666
Q ss_pred HHHHHHHHHH
Q 009195 269 MGISNMLFFI 278 (540)
Q Consensus 269 ~~~~~~~~~~ 278 (540)
.+++.++.++
T Consensus 723 lll~~ll~~~ 732 (742)
T TIGR01299 723 LACGGLLALK 732 (742)
T ss_pred HHHHHHHHHh
Confidence 6655554443
No 113
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=2.2e-11 Score=124.18 Aligned_cols=172 Identities=20% Similarity=0.236 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH-HHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-TIAIFTTIYLAG 149 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~-~i~i~~~l~~i~ 149 (540)
.+...+..++..........+.+.++.+.+|.+..+.+.......++..++.++.|+++||+ |||+ .+.++.++..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHH
Confidence 34444455566666666777888888888899999999999999999999999999999998 9999 999999888888
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+.+... .+...+++..++.|++.+...+....++.|.+|+++ |++
T Consensus 256 ~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~ 301 (352)
T cd06174 256 LLLLALA----------------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGT 301 (352)
T ss_pred HHHHHHh----------------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHH
Confidence 8777654 345667788899999999999999999999999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
.+++++...++|..+++.+.+++.+..+|++.+.+.++..+++.+..+
T Consensus 302 ~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 302 ASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999888999999988887776665543
No 114
>PRK09669 putative symporter YagG; Provisional
Probab=99.39 E-value=9.1e-11 Score=125.55 Aligned_cols=177 Identities=10% Similarity=0.070 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHH-HHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWT-IAIFTTIYLAG 149 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~-i~i~~~l~~i~ 149 (540)
-.+..+..++....+..+++.|+++.+|++...++.+..+..+...+..|+.|+++||. +||||. ++++.+...+.
T Consensus 14 yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~ 93 (444)
T PRK09669 14 YGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVV 93 (444)
T ss_pred hcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHH
Confidence 33444556666666778899999999999999999999999999999999999999993 387554 55666666665
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++... |. .+.......+++..++.+++..+......++.+|+.++.++ |.+
T Consensus 94 ~~l~f~~-------p~---------------~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e-----R~~ 146 (444)
T PRK09669 94 CLLTFYT-------PD---------------FGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE-----RHS 146 (444)
T ss_pred HHHHHhC-------CC---------------CCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH-----HHH
Confidence 5544332 11 00013345555555666777777777778999998854321 888
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhh-------ccchHHHHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~-------~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
..++.....++|..+++.+...+.. ..+|+..+.+.+++.++..++.+
T Consensus 147 l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 147 LQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 8888777777877777665433322 24677766666555544443333
No 115
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=2.7e-11 Score=127.43 Aligned_cols=171 Identities=15% Similarity=0.144 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++.+.+..++.....+++..++|.|+++.+|++..+++...+.+.++..++.+++|+++||+ |||+.+.....+..+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~ 284 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVL 284 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHH
Confidence 445555566666677778889999999999999999999999999999999999999999998 9999888777665555
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
..+.... .+...+.+..++.|++.+...+...++..|..|.+ +++
T Consensus 285 ~~~~~~~----------------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~ 329 (394)
T PRK03699 285 MYLFVNT----------------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPK 329 (394)
T ss_pred HHHHHHc----------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHH
Confidence 4444332 23334455667788888877788788888877643 445
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
..++.+....+|+.++|.+.+++.+..|++..+++.+++.+++.++.
T Consensus 330 ~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 330 LVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 56777777889999999999999999999999987777666554443
No 116
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.39 E-value=1.5e-11 Score=127.04 Aligned_cols=168 Identities=15% Similarity=0.081 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
+......++..+.......+.+.|. +++|.+..+.+...+...++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 208 WVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHH
Confidence 3333444444444444445556665 56899988889999999999999999999999998 999999998888888777
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
++..... .+...+++..++.|++.+...+..+.+..|.+|+++ |++.+
T Consensus 286 ~~~~~~~--------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~ 333 (377)
T TIGR00890 286 AMLFIPM--------------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANY 333 (377)
T ss_pred HHHHccc--------------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHh
Confidence 6654310 122334455677888888888888899999999988 99999
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~ 273 (540)
++++....+|..++|.+.+++.++.||++.|.+.+++.++++
T Consensus 334 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 334 GFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999999999988777665543
No 117
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.38 E-value=3.5e-11 Score=126.55 Aligned_cols=165 Identities=13% Similarity=0.071 Sum_probs=129.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 009195 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~ 158 (540)
++..++++.+..+++.|+.+ .|++ ..+...+.+.++..++.++.|+++||+ |||+.+.++.++..++.+++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~-- 299 (399)
T PRK05122 226 ALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA-- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh--
Confidence 34455566666777888764 4653 345566777888889999999999997 99999988888777777666553
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHH
Q 009195 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (540)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~ 238 (540)
.+...++++.++.|++.+...+.......|.+|++. |++..++++...
T Consensus 300 --------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 347 (399)
T PRK05122 300 --------------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFL 347 (399)
T ss_pred --------------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHH
Confidence 234556677889999998888888888889998877 999999999999
Q ss_pred hHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 239 TVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 239 ~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
++|..+++.+.+++.+..||++.|++.+++.++++++.+...+
T Consensus 348 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 348 DLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999887777776666555443
No 118
>PRK09848 glucuronide transporter; Provisional
Probab=99.38 E-value=2.2e-10 Score=122.78 Aligned_cols=155 Identities=11% Similarity=0.042 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHHH-HHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTI-AIFTTIY 146 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~i-~i~~~l~ 146 (540)
.+.-.+..+..++.+..+.++++.|+++.+|++..+++.+.....+...+..++.|+++||. +||||.+ +++.+..
T Consensus 10 ~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~ 89 (448)
T PRK09848 10 IVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPL 89 (448)
T ss_pred HHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHH
Confidence 33344556666777767778888999999999999999999999999999999999999995 3777755 4555544
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.+..+++..... ...+ ......+++..++.+++.+...+...++..++..+.++
T Consensus 90 ~~~~~~~~~~~~--~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~----- 143 (448)
T PRK09848 90 MIFSVLVFWVPT--DWSH-------------------SSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS----- 143 (448)
T ss_pred HHHHHHHHhCcC--CCCc-------------------chHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----
Confidence 444333322100 0000 02233344455677888888887777888887765332
Q ss_pred hhhHHHHHHHH-----HhHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLS-----VTVGAIVAFTLVVY 251 (540)
Q Consensus 227 R~~~~~~~~~~-----~~lg~~i~p~i~~~ 251 (540)
|.+..++-.++ .+++..++|.+.+.
T Consensus 144 r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~ 173 (448)
T PRK09848 144 RARLGAARGIAASLTFVCLAFLIGPSIKNS 173 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66665554332 34555666666554
No 119
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.36 E-value=5e-11 Score=123.78 Aligned_cols=162 Identities=10% Similarity=0.042 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhc
Q 009195 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (540)
Q Consensus 80 ~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~ 159 (540)
+..........+++.|+++++|.+..+.+.......+...++.+++|+++||+ |||+++.++.++..++.+.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~--- 285 (375)
T TIGR00899 210 LMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAAD--- 285 (375)
T ss_pred HHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHH---
Confidence 33333344456678899899999999998888777777778889999999998 99999888776555544433332
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHh
Q 009195 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (540)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~ 239 (540)
.+...+++.+++.|++.+...+....+..|.+|+ + +++.+++++...+
T Consensus 286 -------------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~ 333 (375)
T TIGR00899 286 -------------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGR 333 (375)
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHH
Confidence 3445566677788888888778888888898875 3 5688999999999
Q ss_pred HHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 240 VGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 240 lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
+|..++|.+.+++.+..||+..|++.++..+++.++..
T Consensus 334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988877766666543
No 120
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.36 E-value=1.5e-10 Score=120.47 Aligned_cols=174 Identities=11% Similarity=-0.014 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
+..+......+...+.+-...++.+.+++++.|++.++.|.+.++..+...+..|+.|.++||+ |.||-++....+..+
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHH
Confidence 3566666666777777666788999999999999999999999999999999999999999998 966655544433322
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHH----HHhhcccchhhhhhhhccCCCCCchhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYIT----GFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
...+.......+.+. .| ++++.++. +++..+..+..-++..+..
T Consensus 86 l~~pff~~v~~pll~---------------------~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s-------- 133 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQ---------------------SN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERVS-------- 133 (412)
T ss_dssp TCHHHHHHTHHHHHH---------------------TT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHH---------------------HH---HHHHHHHHHHHHHHHHcccchHHHHHHHHHH--------
Confidence 222211110000000 11 22233332 3333333344444443322
Q ss_pred hhhhhHHHH--HHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNF--FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 225 ~~R~~~~~~--~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|...+-+ -.+.+.+|.+++..++|++.+ .+-...||+..+..++..++.+.
T Consensus 134 --r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 134 --RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp --HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred --HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHH
Confidence 2222222 333566888888889998876 35566788766655544444443
No 121
>PTZ00207 hypothetical protein; Provisional
Probab=99.36 E-value=5.4e-11 Score=129.91 Aligned_cols=178 Identities=9% Similarity=-0.015 Sum_probs=129.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
.++|..+........+.... |++. .....+++++|++..+.+++.++... ..++.++.|+++||+ |||+++.++.+
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~-y~fs-v~s~~L~~~lgls~~~l~~i~svg~~-~g~~~lp~G~L~Dr~-G~R~vllig~l 99 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFM-YAFN-LISGAMQARYNLTQRDLSTITTVGIA-VGYFLLPYSFIYDYL-GPRPIFVLSMT 99 (591)
T ss_pred cchHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHhCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHh-CcHHHHHHHHH
Confidence 45665555445444444333 3443 33557889999999999988876443 345666789999997 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..+++++++++... ... .+.+.+++.|++.|+|.+...+.....+.++|| ++
T Consensus 100 l~~iG~ll~ala~~~--~i~--------------------~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~---- 152 (591)
T PTZ00207 100 VFCLGTLLFALTFQE--VIE--------------------GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN---- 152 (591)
T ss_pred HHHHHHHHHHHHhcc--ccc--------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh----
Confidence 999999998875220 001 357888999999999999888888888999997 56
Q ss_pred hhhhhHHHHHHHHHhHHHHH-HHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i-~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
|++..++......+|+.+ +++..+++.+ +|+..|++.++..++..++.+
T Consensus 153 --RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~--~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 153 --RGAVVAIMKTFTGLGSAILGSIQLAFFSD--NTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 5555565543 577777766665544433333
No 122
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.35 E-value=9.4e-10 Score=115.87 Aligned_cols=130 Identities=12% Similarity=0.025 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
++....++..+.+-...++++.|+++ .|++..+.+.+.+...+...+.++++|+++||...+|+.+.+..++..+....
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 34455555555555566788889975 67999999999999999999999999999999845677777766665554444
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
.... .+...+++..++..+......|...++.-+...++. ..-+|-|..+
T Consensus 85 ~~~~----------------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~~~--~~YG~iRlwG 134 (400)
T PF03825_consen 85 LAFS----------------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGDRG--KDYGRIRLWG 134 (400)
T ss_pred HHHh----------------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccc--CCCCcchhhh
Confidence 4332 345556666677777777777777777766665322 1223555544
Q ss_pred H
Q 009195 233 F 233 (540)
Q Consensus 233 ~ 233 (540)
-
T Consensus 135 S 135 (400)
T PF03825_consen 135 S 135 (400)
T ss_pred h
Confidence 3
No 123
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.34 E-value=7e-11 Score=122.41 Aligned_cols=180 Identities=12% Similarity=-0.020 Sum_probs=128.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHH-HHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-AIFTTIYL 147 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i-~i~~~l~~ 147 (540)
+..+...+..++.....+.+..+.+.|+++.+|.+..+.++......++..++.+++|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 3566677777788888888888999999999999999999999999999999999999999998 988621 11111111
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++.+...+..... +. ..+..... ...+.+.+..+..+...++.+|.+|++. |
T Consensus 294 ~~~~~~~~~~~~~---~~------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 345 (399)
T TIGR00893 294 IAGLVLSLLMFAT---NY------------------VNIPYAAL-ALVALGFFGLGAGAIGWALISDNAPGNI------A 345 (399)
T ss_pred HHHHHHHHHHHHh---cc------------------chhHHHHH-HHHHHHHhchhhhhHHHHHHHhhcChhH------H
Confidence 1111111110000 00 01222233 3333333333378888999999999988 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~ 277 (540)
++.+++++...++|..++|.+.+++.+..| |+..|++.++..+++.++.+
T Consensus 346 g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 346 GLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888 99998887777666555443
No 124
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.34 E-value=4.2e-11 Score=128.51 Aligned_cols=178 Identities=17% Similarity=0.139 Sum_probs=125.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhcc-chHHHH-HHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYL-GRYWTI-AIFTTIY 146 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~-GR~~~i-~i~~~l~ 146 (540)
+.++...+..++.....|++..++|.|+++..|++..+++.....+.++..++.+++|+++||+. |||+.. .+...+.
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~ 332 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLV 332 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHH
Confidence 35666777777777777888899999999999999989988888888888999999999999972 344332 2222333
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.+.+.+. +. .+.....+..++.|.+..........+..|.+|++.
T Consensus 333 ~~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------ 380 (452)
T PRK11273 333 TIATIVYWLN-------PA-------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------ 380 (452)
T ss_pred HHHHHHHHHh-------cc-------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------
Confidence 3333222221 00 123333344455555443333344456779999988
Q ss_pred hhhHHHHHHHHHhHHHHH-HHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIV-AFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i-~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|++++++.+...++|+.+ +|.+.+++.++.||+..|++.++..+++++....
T Consensus 381 ~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 433 (452)
T PRK11273 381 AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 433 (452)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888654 7999999999999999998877766666555443
No 125
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.33 E-value=9.3e-11 Score=123.54 Aligned_cols=168 Identities=10% Similarity=-0.005 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~ 153 (540)
+....++.....+.+..+++.|+.+ .|++..+.+...+...++..++.++.|+++||+ |||+.+.++.+...++.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 302 (406)
T PRK11551 225 LWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAAL 302 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHH
Confidence 3333444455566677778888865 799999999999999999999999999999998 99999888666555555444
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHH
Q 009195 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (540)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~ 233 (540)
... .+...+.+..++.|++.++..+...++..|.+|++. |++.+++
T Consensus 303 ~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~ 348 (406)
T PRK11551 303 AAA----------------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGA 348 (406)
T ss_pred Hhc----------------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhH
Confidence 332 233445556677888887778888899999999988 9999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHH
Q 009195 234 FYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 234 ~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~ 277 (540)
++....+|..++|.+.+++.++.+ |...+++...+.+++.++.+
T Consensus 349 ~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 349 AVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988654 55566555555555444443
No 126
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.33 E-value=7.3e-11 Score=124.19 Aligned_cols=164 Identities=12% Similarity=0.037 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChH---HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 80 AERMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 80 ~~~~~~~~~~~~~~~yl~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
+.......+.+.++.|+.+..+.... ..+.+.+...++..++.++.|+++||+ |||+++.++.++..++.+++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 230 IIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHh
Confidence 33344444556677787765443322 234555566677788889999999998 99999998888777666655443
Q ss_pred hhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHH
Q 009195 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (540)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~ 236 (540)
.+...+++.+++.|++.+...+...+++.+..|++. |++.+++++.
T Consensus 309 ----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 354 (408)
T PRK09874 309 ----------------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQS 354 (408)
T ss_pred ----------------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHH
Confidence 235566778889999999999999999989888888 9999999999
Q ss_pred HHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 237 SVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 237 ~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
..++|..+||.+++++.+..||++.|++.+++.+++.+..+.
T Consensus 355 ~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 355 FRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888877776665544
No 127
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.33 E-value=9.7e-12 Score=109.32 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHH
Q 009195 112 NNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLY 191 (540)
Q Consensus 112 ~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (540)
+.+.++..++.++.|+++||+ |||+.+.++..+..++.+.+... .+...+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~ 55 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS----------------------------SNITVLI 55 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh----------------------------ccHHHHH
Confidence 345667788899999999997 99999999988888887766654 3466777
Q ss_pred HHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 192 TVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (540)
Q Consensus 192 ~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~ 271 (540)
+.+++.|++.+...+....+..|.+|+++ |++..++.+....+|..++|.+.+++.+..+|++.+++..+..++
T Consensus 56 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (141)
T TIGR00880 56 IARFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALA 129 (141)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHH
Confidence 88999999999999999999999999988 999999999999999999999999999888999998887766665
Q ss_pred HHHHHHH
Q 009195 272 SNMLFFI 278 (540)
Q Consensus 272 ~~~~~~~ 278 (540)
..+....
T Consensus 130 ~~~~~~~ 136 (141)
T TIGR00880 130 AFILLAF 136 (141)
T ss_pred HHHHHhh
Confidence 5554443
No 128
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.33 E-value=7.5e-11 Score=125.84 Aligned_cols=177 Identities=16% Similarity=0.120 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccc--hHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG--RYWTIAIFTTIYL 147 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~G--R~~~i~i~~~l~~ 147 (540)
.++.+.+..++..+.++++..+++.|+.+++|++..+++...+.+.++..++.+++|+++||+.+ |++......+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~ 323 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGIL 323 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHH
Confidence 45556666666666777788899999988899999999999999999999999999999999732 2332222221112
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
+..+.+... +. .+.....+..+..|++............+|.+|++. |
T Consensus 324 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 371 (434)
T PRK11663 324 LSVGSLWLM-------PF-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------A 371 (434)
T ss_pred HHHHHHHHc-------cc-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------H
Confidence 121111111 10 122223333344454433333344566789998888 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
++..++.+...++|+.++|.+.+++.++.||+..|++.+++.+++.+..+.
T Consensus 372 g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 372 GAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred HhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887776665554444
No 129
>PRK11462 putative transporter; Provisional
Probab=99.32 E-value=2.4e-09 Score=115.21 Aligned_cols=177 Identities=10% Similarity=0.056 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHHHH-HHHHHHHHHH
Q 009195 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIA-IFTTIYLAGL 150 (540)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~i~-i~~~l~~i~~ 150 (540)
.+..+..++.+..+..++..|+++.+|++...++.+..+.-+.-++.-|+.|+++||. +||||..+ ++.+...++.
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~ 94 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVC 94 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHH
Confidence 3455556666666778899999999999999999999999999999999999999973 58876555 5556666666
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+++... +...+ ......+++.-.+..++.........++.+|+.++.++ |.+.
T Consensus 95 ~llf~~---p~~s~-------------------~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l 147 (460)
T PRK11462 95 VLAYST---PDLSM-------------------NGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISL 147 (460)
T ss_pred HHHHhC---CCCCc-------------------chHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHH
Confidence 555432 10000 12234455555667888888888888999999975432 9999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhc-------cchHHHHHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQME-------HGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~-------~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
.++.....++|..+++.+...+... .+|+....+.+++.++..++.+.
T Consensus 148 ~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 148 QSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9998888888887777766544332 24666555555444444433333
No 130
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.32 E-value=6.4e-11 Score=128.28 Aligned_cols=150 Identities=16% Similarity=0.118 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 009195 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (540)
Q Consensus 87 ~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~ 166 (540)
.+..+++.|+++.+|++..+++++.+...++..++.+++|+++||+ |||+++.++.++..++.++.... ++
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~-------~~- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAI-------GG- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhc-------cc-
Confidence 4567889999989999999999999999999999999999999997 99999888776655554433322 10
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHH
Q 009195 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAF 246 (540)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p 246 (540)
.+...+.+..++.++...+..+..++++.|.+|++. |++.+++++...++|+.++|
T Consensus 364 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp 419 (496)
T PRK03893 364 ------------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAP 419 (496)
T ss_pred ------------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHH
Confidence 223333344444444434445677888999999888 99999999898999999999
Q ss_pred HHHHHhhhccchHHHHHHHHHHH
Q 009195 247 TLVVYIQMEHGWGSAFGALAIAM 269 (540)
Q Consensus 247 ~i~~~l~~~~gw~~~f~i~~i~~ 269 (540)
.+++++.+.+||+..+.+.++..
T Consensus 420 ~l~g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 420 ILGALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHhccCChHHHHHHHHHHH
Confidence 99999999999988776554433
No 131
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.32 E-value=2.3e-10 Score=120.47 Aligned_cols=177 Identities=15% Similarity=0.043 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+.+.+..++..++++++..+++.|+.+ +|.+..+++...+.+.++..++.++.|+++||+ |||+.+.++.++..++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVG 283 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHH
Confidence 34555555566677888888999999976 899999999999999999999999999999997 9999998888777776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC-CCCchhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD-ERSKDYKTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~-~~~~~~~~~R~ 228 (540)
.+++... + .+...+ ..++.|++.+...+.......+.++ ++. |+
T Consensus 284 ~~~~~~~-------~--------------------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g 328 (393)
T PRK09705 284 FCGFIWL-------P--------------------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AG 328 (393)
T ss_pred HHHHHHc-------c--------------------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HH
Confidence 6654432 1 111112 2245678888777777777778875 344 89
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHHhcccc
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIGTPLY 283 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~~~~~~ 283 (540)
+.+++.+...++++.++|.+.+++.+..| |...|++.+++.++.++..+...++.
T Consensus 329 ~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 329 KLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999888899999999999999999886 88888887777666666555544443
No 132
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=1e-10 Score=124.30 Aligned_cols=175 Identities=11% Similarity=0.044 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------hHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKS--------FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
.++..++..........+.+.|+.+ .|.+ ....+...++..++..++.++.|+++||+ |||+++.++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~ 290 (418)
T TIGR00889 213 FFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVA 290 (418)
T ss_pred HHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 3333444444443444666777754 4543 35668888888888999999999999998 999999999988
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..++..++..... . ..+...+++..++.|++.+...+....+++|.+|++.
T Consensus 291 ~~v~~~l~~~~~~------~------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~----- 341 (418)
T TIGR00889 291 WALRFGFFAYGDP------E------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI----- 341 (418)
T ss_pred HHHHHHHHHHcCc------c------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-----
Confidence 8887666654210 0 0124556677889999998888888999999999888
Q ss_pred hhhhHHHHHH-HHHhHHHHHHHHHHHHhhhc------cchHHHHHHHHHHHHHHHHHHHHhc
Q 009195 226 HLDRFFNFFY-LSVTVGAIVAFTLVVYIQME------HGWGSAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 226 ~R~~~~~~~~-~~~~lg~~i~p~i~~~l~~~------~gw~~~f~i~~i~~~~~~~~~~~~~ 280 (540)
|++.+++++ ....+|..+||+++|++.++ +||++.|.+.+++.+++.+++++..
T Consensus 342 -~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~ 402 (418)
T TIGR00889 342 -RASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFF 402 (418)
T ss_pred -HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999986 56789999999999999887 4699999887777666555555443
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=7.7e-11 Score=123.35 Aligned_cols=165 Identities=13% Similarity=0.058 Sum_probs=126.8
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
++|+.........++.....+.+..+++.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~ 313 (405)
T TIGR00891 235 KRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLA 313 (405)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHH
Confidence 3444444444444444555556677889999999999999999999999999999999999999997 999998887765
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
..+..+..... . .+...+.++.++.+++.++..+..+.++.|.+|++.
T Consensus 314 ~~~~~~~~~~~-------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 361 (405)
T TIGR00891 314 GQLLIIPVFAI-------G--------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ----- 361 (405)
T ss_pred HHHHHHHHHHh-------C--------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch-----
Confidence 43322222111 0 234455566677777777777888899999999988
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHH
Q 009195 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGA 264 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i 264 (540)
|++.+++.+...++|+.++|.+.+++.+..| |+..+..
T Consensus 362 -~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 362 -RAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred -hHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999999999999999888 8766554
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.29 E-value=3.5e-10 Score=118.76 Aligned_cols=171 Identities=15% Similarity=-0.036 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
...+..++.....++...+++.|+.+.+|.+..+++++.+.+.++..++.++.|+++||+ |||+.+ ++..+..++...
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~~ 286 (390)
T PRK03545 209 SLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLLL 286 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHHH
Confidence 333444455555566667788899888999999999999999999999999999999997 988654 444433333332
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
..... .+...+++..++.|++.+...+.....+.+..| +. |+++++
T Consensus 287 l~~~~---------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g 332 (390)
T PRK03545 287 LLPAA---------------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMA 332 (390)
T ss_pred HHHHh---------------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHH
Confidence 22210 245556667778888887777777777888766 45 888999
Q ss_pred HHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 233 FFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 233 ~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
+++....+|..+||+++|++.++.|++..|++.+++.+++++.....
T Consensus 333 ~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (390)
T PRK03545 333 LFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILI 379 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHH
Confidence 98888899999999999999999999999998888777776665543
No 135
>PRK15075 citrate-proton symporter; Provisional
Probab=99.29 E-value=1.8e-10 Score=122.95 Aligned_cols=161 Identities=15% Similarity=0.060 Sum_probs=113.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+|+.....+...++....++.+..+++.|+++.+|++..++++......++..++.+++|+++||+ |||+++.++.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~ 314 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLA 314 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHH
Confidence 343333334444556667778888999999998999999888888888888899999999999998 9999887765443
Q ss_pred HHHHHH-HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 147 LAGLTG-ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 147 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
.+..++ ..... .. .+...+.+..++.+++.+...+....+..|.+|++.
T Consensus 315 ~~~~~~~~~~~~------~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~----- 364 (434)
T PRK15075 315 ILTAYPALSWLV------AA-------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV----- 364 (434)
T ss_pred HHHHHHHHHHHH------cC-------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc-----
Confidence 322211 11110 00 122233344455566666666666788999999998
Q ss_pred hhhhHHHHH-HHHHhHHHHHHHHHHHHhhhccchH
Q 009195 226 HLDRFFNFF-YLSVTVGAIVAFTLVVYIQMEHGWG 259 (540)
Q Consensus 226 ~R~~~~~~~-~~~~~lg~~i~p~i~~~l~~~~gw~ 259 (540)
|++++++. +++..+++.++|.+.+++.+.+|+.
T Consensus 365 -rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 365 -RTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred -cchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 99999984 4445556788999999999988853
No 136
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.29 E-value=2.3e-10 Score=121.92 Aligned_cols=179 Identities=14% Similarity=0.074 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhh----hccchHHHHH-HHHHHHHHHHHH
Q 009195 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD----AYLGRYWTIA-IFTTIYLAGLTG 152 (540)
Q Consensus 78 ~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD----~~~GR~~~i~-i~~~l~~i~~~~ 152 (540)
.+...+.......+++.|+++.+|+++...+.+..+..+..++.-|+.|.++| |+ ||||..+ ++.++..++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 35555666666678899999999999999999999999999999999999999 66 8766554 677777777766
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
+.... |. +.+.......+.+..++..++.........++.+|+.++.++ |.+..+
T Consensus 89 lf~~~------p~--------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~ 143 (428)
T PF13347_consen 89 LFSPP------PA--------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSS 143 (428)
T ss_pred hhccc------cc--------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHH
Confidence 65420 10 000001233445666677889899999999999999986432 888888
Q ss_pred HHHHHHhHHHHHHHHHHHHhhhcc-------chHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 233 FFYLSVTVGAIVAFTLVVYIQMEH-------GWGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 233 ~~~~~~~lg~~i~p~i~~~l~~~~-------gw~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
+-.....+|..+...+.+.+.+.. +|++...+.+++.++..++..+..++
T Consensus 144 ~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 144 WRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 877777777765555555443221 58887777777666665555554443
No 137
>PRK12382 putative transporter; Provisional
Probab=99.29 E-value=1.3e-10 Score=121.90 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhc
Q 009195 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATM 159 (540)
Q Consensus 80 ~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~ 159 (540)
+..+.+..+..+.+.|+++ .|++. .+.....+.++..++.++.|++.||+ |||+.+.++..+..++.+++...
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~--- 299 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA--- 299 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc---
Confidence 3344555566677777754 46653 45556667777888999999999997 99999999888888877665543
Q ss_pred cccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHh
Q 009195 160 KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVT 239 (540)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~ 239 (540)
.+....+++.++.|++.+...+...+...|.+|++. |++.+++++....
T Consensus 300 -------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 348 (392)
T PRK12382 300 -------------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQD 348 (392)
T ss_pred -------------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHH
Confidence 234556677888899988888888888999999888 9999999999999
Q ss_pred HHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 240 VGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 240 lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+|..++|.+.+++.++.||++.|.+.+++.+++.++.+.
T Consensus 349 ~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 349 IAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999888877776665544
No 138
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.29 E-value=6.2e-11 Score=125.80 Aligned_cols=155 Identities=12% Similarity=0.097 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHhh---CCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 009195 88 LSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMP 164 (540)
Q Consensus 88 ~~~~~~~yl~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~ 164 (540)
....++.|+.+.+ +.+..+.+.+.++..++..++.+++|+++||+ |||+.+.++.++..++..++.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~-------- 312 (420)
T PRK09528 242 FDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFA-------- 312 (420)
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhc--------
Confidence 3345666766543 56667778888888888899999999999998 99999999888888877776654
Q ss_pred CCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHH-HHHHHhHHHH
Q 009195 165 NQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF-FYLSVTVGAI 243 (540)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~-~~~~~~lg~~ 243 (540)
.+...+++.+++.|++.+...+....++.|.+|++. |++..+. ++....+|..
T Consensus 313 --------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ 366 (420)
T PRK09528 313 --------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAV 366 (420)
T ss_pred --------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHH
Confidence 345667777888898888877778889999999887 7777665 6777889999
Q ss_pred HHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 244 VAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 244 i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
++|.+.|++.+..||+..|.+.+++.++..++.+
T Consensus 367 ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 367 FLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887776655544443
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.28 E-value=1.8e-10 Score=121.99 Aligned_cols=158 Identities=12% Similarity=-0.009 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 009195 86 FGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (540)
Q Consensus 86 ~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~ 165 (540)
+++..+++.|+++.+|.+..+.+++.+...++..++.++.++++||. ++++.+..+.++..++.+++...
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~--------- 309 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM--------- 309 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc---------
Confidence 45667788899888999999999999999999999999999999986 88888888877777776665543
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHH
Q 009195 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (540)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~ 245 (540)
.+....+++.++.|++.+...+...+++.|.+|++. |++.+++++...++|..+|
T Consensus 310 -------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g 364 (417)
T PRK10489 310 -------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIG 364 (417)
T ss_pred -------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHH
Confidence 344556677788888888777777889999999888 9999999999999999999
Q ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 246 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 246 p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|.+.|++.+..|++..+.+.+++.++..++...
T Consensus 365 ~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 365 AALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 999999999989888877666555444444433
No 140
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.27 E-value=4.1e-10 Score=120.08 Aligned_cols=169 Identities=11% Similarity=0.033 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhh
Q 009195 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (540)
Q Consensus 78 ~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~ 157 (540)
.++....+|++..+++.|+.+.+|.+..+.+...++..++..++.++.|+++||+ |||+++.++.++..+..++.....
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3444677888899999999999999998888888887777788888999999998 999988776655443333222110
Q ss_pred hccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHH
Q 009195 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (540)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~ 237 (540)
. .. .+....+....+.+++.+...+....+.+|.||++. |++++++.+..
T Consensus 331 ~-----~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~ 380 (432)
T PRK10406 331 Q-----NV-------------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAV 380 (432)
T ss_pred H-----cC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHH
Confidence 0 00 111211112222223333344556788899999999 99999995544
Q ss_pred -HhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 009195 238 -VTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 238 -~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~ 278 (540)
..+++..+|.+.+++. .+| |...+++.++..+++++..++
T Consensus 381 g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 381 ANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4454556888888664 445 555565555555555444443
No 141
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.27 E-value=5e-10 Score=118.25 Aligned_cols=176 Identities=14% Similarity=0.049 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH-HHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA-IFTTIYLA 148 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~-i~~~l~~i 148 (540)
.++...+..++....+++..++.|.|++ ++|++..+.+.+.....++..++.++.|+++||+ |||+.+. .+.+...+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 223 NVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGI 300 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHH
Confidence 3455556667777888888889998885 5899999999988889999999999999999997 9888764 22222223
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
+.+.+..... ... .+....++..++.|++.+...+. .....|..| ++ |+
T Consensus 301 ~~~~l~~~~~---~~~--------------------~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g 349 (402)
T TIGR00897 301 FTLALYYIPQ---HFG--------------------HSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KG 349 (402)
T ss_pred HHHHHHHHHH---ccC--------------------CcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hH
Confidence 2222222100 000 23444556667778877765443 455667654 46 99
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+.+++++...++|..++|.+.+++.+.+||+..|++.+++.+++.++..+
T Consensus 350 ~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 350 AAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888777666655544
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.26 E-value=5.8e-10 Score=116.92 Aligned_cols=169 Identities=9% Similarity=-0.076 Sum_probs=140.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
+..+...+..++...+.+...++.+.|+++ +|.+..+.+...+...++..++.++.+++.||+ |+|+.+.++.++..+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 345666666677777777788888999965 899999999999988899999999999999998 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
..++++.+ .+...+++..++.|+..+...+....++.+. |++. |+
T Consensus 283 ~~~~~~~~----------------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~ 327 (382)
T TIGR00902 283 RWAIIGAI----------------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IA 327 (382)
T ss_pred HHHHHHhH----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HH
Confidence 88887764 4677788889999999999999999999987 8777 88
Q ss_pred hHHHHHH-HHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFY-LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 229 ~~~~~~~-~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
++.++++ ....+|..+++.++|++.++.|+ ..|.+.++..++++++
T Consensus 328 ~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 328 KLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 8889876 46779999999999999999886 5566666655555444
No 143
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.25 E-value=2.3e-08 Score=107.51 Aligned_cols=57 Identities=21% Similarity=0.314 Sum_probs=48.1
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHH
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFL 510 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~ 510 (540)
.|++..+...|++.+.....++++|++++.+.+.+| +..+-++.+.++.++++++++
T Consensus 409 iP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg-----------------~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 409 IPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG-----------------SQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------------CchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999887 234556677777777766653
No 144
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.25 E-value=6.1e-10 Score=119.64 Aligned_cols=182 Identities=14% Similarity=0.116 Sum_probs=147.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH--HHHHHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY--WTIAIFTTI 145 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~--~~i~i~~~l 145 (540)
.|.+..-+++.++.+-+...+......|.++++|++..+...+..+..+...+|.+++|++.||+ |-| ++++++.++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLIL 358 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHH
Confidence 35667777777888888888999999999999999999999999999999999999999999998 988 888777766
Q ss_pred HHH-HHHHHH-HhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 009195 146 YLA-GLTGIT-LCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (540)
Q Consensus 146 ~~i-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (540)
..+ ....+. +... .... .+.+.+++.-++.|+..|+.++..=++.+|+.|+..
T Consensus 359 ~~~i~~~g~~G~~~~---~~g~-------------------~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~--- 413 (477)
T PF11700_consen 359 WIIIPLYGLFGFWPS---FFGL-------------------KSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR--- 413 (477)
T ss_pred HHHHHHHHHHHhhhc---ccCc-------------------ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch---
Confidence 533 222221 1000 0000 345567777789999999999999999999999988
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 009195 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 224 ~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~ 278 (540)
.+.+|++|.+..-..+.+||++.+.+.+.+| -|+++....++.+++++++..
T Consensus 414 ---e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 414 ---EAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999999887 888888877777777776644
No 145
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.24 E-value=6.8e-10 Score=116.24 Aligned_cols=154 Identities=16% Similarity=0.143 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009195 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (540)
Q Consensus 83 ~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~ 162 (540)
+.+.....+++.|+++ .|.+..+.+...+...++..++.++.|+++||+ |||+++.++.++..++.+... .
T Consensus 214 ~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~------ 284 (381)
T PRK03633 214 IVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S------ 284 (381)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h------
Confidence 3344455667888865 699999999889999999999999999999998 999999888777776654432 1
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHH
Q 009195 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (540)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~ 242 (540)
....+...++.|++.+...+...+...|..|+++ ++...+.++...++|.
T Consensus 285 ------------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~ 334 (381)
T PRK03633 285 ------------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGS 334 (381)
T ss_pred ------------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHH
Confidence 1122345566777777777888888899988766 7777777778889999
Q ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 243 IVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 243 ~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
.+||.+++++.+++||++.|.+.+.+.++..+.
T Consensus 335 ~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 335 LLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 999999999999999999998877766555443
No 146
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.22 E-value=3.6e-10 Score=120.49 Aligned_cols=187 Identities=13% Similarity=0.005 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+..++..+......+.+..+ ..+..+++|++..++++......++..++.+++|+++||+ |||+.+.++.++..++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 285 LFLGVVLQWFQQFTGINAIMYY-SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHhCCeehHHH-HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHH
Confidence 3333333333333333333333 4455567899988888888888899999999999999998 9999999988777777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++.+..... .+. .++..+...+....++.+....+..+....+..|.+|++. |++
T Consensus 363 ~~~~~~~~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~ 419 (481)
T TIGR00879 363 LFVLGILGASF--VTG---------------SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPK 419 (481)
T ss_pred HHHHHHHhhcc--cCC---------------cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHH
Confidence 66665321100 000 0000122222222223333333344666778899999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
..++.+...++|+.++|.+.+++.++.+|++.|++.+++.+++.++.++..+
T Consensus 420 ~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 420 GISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 9999999999999999999999998889999998877776666665544433
No 147
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=1.2e-09 Score=118.58 Aligned_cols=171 Identities=11% Similarity=0.076 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHH-HHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhh
Q 009195 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVN-NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCA 157 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~ 157 (540)
++..+..+....+.++|+.+.+|++..+.+.... ...++..++.+++|+++||+ |||+.+.++.++..++.+.+....
T Consensus 232 ~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~ 310 (491)
T PRK11010 232 VLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLS 310 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555667788888889999999998874 55678999999999999998 999988776665555443332211
Q ss_pred hccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHH
Q 009195 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (540)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~ 237 (540)
. .+ .+...+....++..++.|...+...++..+..+++. +++.+++.+..
T Consensus 311 ~----~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~ 360 (491)
T PRK11010 311 I----TD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSAL 360 (491)
T ss_pred h----cc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHH
Confidence 0 00 123333444455444445445666788888888888 78888998888
Q ss_pred HhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 009195 238 VTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 238 ~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~ 280 (540)
.++|..+++.+.|++.+..||+..|.+.+++.++++++....+
T Consensus 361 ~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 361 SAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999998989999999999999999888888877776665543
No 148
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.20 E-value=4e-10 Score=121.05 Aligned_cols=172 Identities=7% Similarity=-0.025 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc-cchHHHHHHHH--HHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY-LGRYWTIAIFT--TIY 146 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~-~GR~~~i~i~~--~l~ 146 (540)
..+......++..++++....+++.|+++ +|++..+++++.+...++..++.+++|+++||. +++++...++. ++.
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 320 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFN 320 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 45555666667777777778888999864 799999999999999999999999999999984 24444443333 222
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.+++... .+...+++.+++.|++.+...++..+++.|.+|++.
T Consensus 321 ~l~~ll~~~~----------------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------ 366 (455)
T TIGR00892 321 GLTHLLCALA----------------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------ 366 (455)
T ss_pred HHHHHHHHHh----------------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------
Confidence 2333333222 345667778889999999999999999999999887
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEH-GWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~-gw~~~f~i~~i~~~~~~~~~ 276 (540)
+++.+++++...++|..+||.+++++.+.. +|++.|++.+++.+++.+..
T Consensus 367 ~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 367 FSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 999999999999999999999999998877 49999988877766555443
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.19 E-value=4.8e-10 Score=119.81 Aligned_cols=180 Identities=15% Similarity=0.079 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+...+..++.....+++..++|.|+++..|++..++++....+.++..++.+++|+++||+ |+++....+..+..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~ 330 (438)
T TIGR00712 252 LLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLV 330 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHH
Confidence 455666666666777788889999999998999999999999999999999999999999997 6543222332222211
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+....... .+. .+.....+..++.|++..+..........|.+|++. |++
T Consensus 331 ~~~~~~~~~----~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 381 (438)
T TIGR00712 331 TIAVIVYWM----NPA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGT 381 (438)
T ss_pred HHHHHHHHh----cCC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eee
Confidence 111111000 010 122233334445555443333333456779999888 999
Q ss_pred HHHHHHHHHhHHH-HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 230 FFNFFYLSVTVGA-IVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 230 ~~~~~~~~~~lg~-~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~ 279 (540)
+.++++...++|+ .++|.+.+++.++.||.+.|++.++..+++.+..++.
T Consensus 382 ~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T TIGR00712 382 AAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 432 (438)
T ss_pred ehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999888877774 6899999999999999999988777666655555443
No 150
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=2.8e-10 Score=117.55 Aligned_cols=161 Identities=16% Similarity=0.128 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH--HHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT--TIYL 147 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~--~l~~ 147 (540)
.++.+.+..++.....+.+..+.+.|+++.+|++..+.+...+...++..++.++.|+++||+.+||+..+... .+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~ 296 (379)
T TIGR00881 217 VLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALII 296 (379)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Confidence 45666666677777777788889999999999999999999999999999999999999998634444332221 1111
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++....... +. .+.....+..++.|+...+..+....+..|.+|++. |
T Consensus 297 ~~~~~~~~~-------~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~ 344 (379)
T TIGR00881 297 VSLLVYWLN-------PA-------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------A 344 (379)
T ss_pred HHHHHHhcC-------cc-------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------h
Confidence 121111110 11 233444555566777666666667788899999988 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAF 262 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f 262 (540)
+++.++++...++|..++|.+.+++.++.||++.|
T Consensus 345 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 345 GTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 99999999999999999999999999999998754
No 151
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.17 E-value=2.1e-09 Score=109.49 Aligned_cols=163 Identities=10% Similarity=-0.005 Sum_probs=123.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~--lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+..+...+..++....--++..+++.|+.+. +|++..+++...+.+.++..++++++++++||+ |+++++.++.++.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 3455555555555555667788999999854 799999999999999999999999999999998 9999988888777
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
+++.++.... .+.. ...+.++.|++.+...|...+...+.+|++..
T Consensus 219 ~~~~~l~~~~----------------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~----- 264 (310)
T TIGR01272 219 VLLSIGAALT----------------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS----- 264 (310)
T ss_pred HHHHHHHHHc----------------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----
Confidence 7766444332 1111 22355688999999999999999898886431
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAM 269 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~ 269 (540)
++++ +. ....+|+.+.|.+.|++.+..|.+.+|++..++.
T Consensus 265 ~asa--i~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~~ 304 (310)
T TIGR01272 265 QGSG--IL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPCY 304 (310)
T ss_pred hhHH--HH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 4443 33 4566899999999999999989888887655543
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=4.1e-09 Score=108.85 Aligned_cols=177 Identities=15% Similarity=0.085 Sum_probs=143.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
+.++......++...+.|..++|+.+++++..|++.+..+++...+.++..+|.+++|+++|| +.|+++.....+..+
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 367888889999999999999999999999999999999999999999999999999999998 788888888777776
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
..+.+.+.. .+.....+..++.|+..+........-.++ .-++. +.
T Consensus 289 ~~l~l~~~~---------------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~ 334 (394)
T COG2814 289 ALLALTFTG---------------------------ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------AD 334 (394)
T ss_pred HHHHHHHhc---------------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hH
Confidence 666655541 234455555566777766655555555566 33344 78
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
...+++....|+|..+|..++|.+.+++|+....++.++..++++++.+...+
T Consensus 335 ~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 335 LAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888888999999999999999999999999999999998888877766443
No 153
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.15 E-value=3.1e-09 Score=112.70 Aligned_cols=148 Identities=16% Similarity=0.044 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009195 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (540)
Q Consensus 83 ~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~ 162 (540)
...+.+..+++.|+++ .|.+..+.+...+...++..++.+++|+++||+ |||+.+..+.++..++.+++...
T Consensus 245 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~------ 316 (426)
T PRK12307 245 GANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI------ 316 (426)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH------
Confidence 3344566778888875 699988889888888899999999999999998 99999988887766655444332
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHH
Q 009195 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (540)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~ 242 (540)
+. .+...+.+..+..+++..+..+..+.++.|.+|++. |++++++.+....+|+
T Consensus 317 -~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~ 370 (426)
T PRK12307 317 -PQ-------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSG 370 (426)
T ss_pred -cc-------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHH
Confidence 00 112222222222333333445667788899999988 9999999888889999
Q ss_pred HHHHHHHHHhhhccchHHHHHH
Q 009195 243 IVAFTLVVYIQMEHGWGSAFGA 264 (540)
Q Consensus 243 ~i~p~i~~~l~~~~gw~~~f~i 264 (540)
.++|.+.+++.+..|+....++
T Consensus 371 ~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 371 TFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHHHHHHHcccHHHHHHH
Confidence 9999999999998886654333
No 154
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.14 E-value=1.2e-09 Score=105.67 Aligned_cols=173 Identities=18% Similarity=0.118 Sum_probs=136.3
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Q 009195 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
........+..|.++.+.++...+.+-..+..+.+.++.+|+|+..++.+.+..-+...+.+++.|.++||+ ||+-...
T Consensus 256 Ltdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv 334 (459)
T KOG4686|consen 256 LTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWV 334 (459)
T ss_pred cccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhH
Confidence 333444556788888888888888888888889999999999999999999999999999999999999998 9998777
Q ss_pred HHHHH-HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 009195 141 IFTTI-YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (540)
Q Consensus 141 i~~~l-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (540)
.+..+ ++++...+++. ...-+++..+.|+..........+.++-..|++
T Consensus 335 ~~a~~~tl~~H~~l~Ft------------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~ 384 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFT------------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEE 384 (459)
T ss_pred HHHHHHHHHHhhhHHhh------------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHH
Confidence 66544 44466555553 223456777888887776666778888888988
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc---hHHHHHHHHHHHH
Q 009195 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG---WGSAFGALAIAMG 270 (540)
Q Consensus 220 ~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g---w~~~f~i~~i~~~ 270 (540)
. .|++++..+...|+|-.+.|++++.+.++-| |--.|.+....+.
T Consensus 385 q------LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~a 432 (459)
T KOG4686|consen 385 Q------LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMA 432 (459)
T ss_pred H------hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHH
Confidence 8 9999999999999999999999999988655 4445544444433
No 155
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.13 E-value=2.2e-09 Score=116.04 Aligned_cols=174 Identities=11% Similarity=0.037 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH-----HHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYW-----TIAIFTTIY 146 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~-----~i~i~~~l~ 146 (540)
+.+.+..++.....+.+..+++.|+.+.+|++..+++...+...++..++.+++|+++||+ |||+ .........
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~ 333 (476)
T PLN00028 255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQT 333 (476)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHH
Confidence 4444444444455556667789999989999999999999999999999999999999997 8762 222111111
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
+.+...+.+... .+.....+..++.+++.+...+...++..+..| +.
T Consensus 334 l~~i~~~~~~~~--------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------ 380 (476)
T PLN00028 334 LGGVFCIWLGRA--------------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------ 380 (476)
T ss_pred HHHHHHHHhccc--------------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------
Confidence 112111111100 223333444455566555555555566666544 45
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~ 280 (540)
|++..++.+...++|+.++|.+.+ ..+..+|+.+|++.+++.+++.++.++.+
T Consensus 381 ~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 381 LGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred chhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 888888877777777777766543 22334699999888877777766665543
No 156
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.11 E-value=1e-08 Score=108.25 Aligned_cols=173 Identities=11% Similarity=-0.101 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
++...+..++.....+......+.|+.+.+|++..+.+.......++..++.++.|+++||+ |||+.+.++.++..++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 217 FVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 34444444444454555556678888888999999888887777788889999999999998 99999999888777777
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
.+..+.... .. .+...++++.++.|++.+...+......... ++++ |++.
T Consensus 296 ~~~~~~~~~----~~-------------------~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~ 345 (406)
T PRK15402 296 LLAALATVI----SS-------------------HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTV 345 (406)
T ss_pred HHHHHHHHc----cc-------------------ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHH
Confidence 766653110 00 2345566777888888887666655544333 3355 8999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~ 274 (540)
.+.+++...+|..+|+.+.+++.+..++....+...+..++.++
T Consensus 346 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 346 SAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998887766655554444444433
No 157
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.11 E-value=2.9e-09 Score=112.40 Aligned_cols=191 Identities=13% Similarity=0.047 Sum_probs=143.1
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-HHH
Q 009195 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWT 138 (540)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR-~~~ 138 (540)
....+.+||.+++..+.+++..+.++.+.+..=+|+++ +.+.+.+..|++++...++..++.+..|+.+-|. |. |+-
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 34557889999999999999999987777777788875 4777888889999999999999999999999997 75 777
Q ss_pred HHHHHHHHHHHHHHH-HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCC
Q 009195 139 IAIFTTIYLAGLTGI-TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFD 217 (540)
Q Consensus 139 i~i~~~l~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~ 217 (540)
++.+.++.++|.++. ++. . .|+ .....++++|++.|+|.|.. +..=+|+++...
T Consensus 105 li~s~ii~~~g~llY~~l~-~----~~~-------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~ 159 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALA-Y----VPN-------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADAST 159 (488)
T ss_pred HHHHHHHHHHHHHHHHHHH-h----ccc-------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccC
Confidence 888888999998888 443 1 122 25678889999999998764 566788999877
Q ss_pred CCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh----hc--------c-chHHHHHHHHHHHHHHHHHHHHhcccc
Q 009195 218 ERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ----ME--------H-GWGSAFGALAIAMGISNMLFFIGTPLY 283 (540)
Q Consensus 218 ~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~----~~--------~-gw~~~f~i~~i~~~~~~~~~~~~~~~~ 283 (540)
.++ |.++++....+..+|..+||.+...+. .. + -+..+-|+.+++.++..++..+..++.
T Consensus 160 ~~d------R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 160 VED------RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred ccc------hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 777 888888866666666666666554332 11 1 144566777777666666655544433
No 158
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.10 E-value=1.8e-09 Score=114.43 Aligned_cols=164 Identities=8% Similarity=-0.083 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHH-HHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-IAIFTTIYL 147 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~-i~i~~~l~~ 147 (540)
..+...+..++....++++.+++|.|+++ ..|.+..+++.......++..++.+++|+++||+ |||+. +.+..++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 45666777777788888899999999977 3477888889889999999999999999999998 87664 333333333
Q ss_pred HHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 148 AGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
++.++.... .+....+.+..+.++|.....+.......|.+|++. |
T Consensus 322 ~~~~~~~~~----------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~ 367 (412)
T TIGR02332 322 AGWLLASAT----------------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------R 367 (412)
T ss_pred HHHHHHHhc----------------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------H
Confidence 332221110 111111222223333333333344455567888888 9
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIA 268 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~ 268 (540)
++++++.+...++|+.++|.+.+.+.+..| |+++|++.++.
T Consensus 368 ~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 368 AIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999999999998875 99988776554
No 159
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.10 E-value=2.8e-09 Score=109.65 Aligned_cols=153 Identities=9% Similarity=0.005 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLS-VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
++......++....++... ...+.|.++.+|.+..+.+.......++..++.++.++++||+ |||+.+.++.++..++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 290 (365)
T TIGR00900 212 LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLA 290 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHH
Confidence 4445555555556665555 5667777777999999999999999999999999999999997 9999988877666666
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
........ .+...+++..++.|++.+...+...+++.|.+|++. |++
T Consensus 291 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~ 337 (365)
T TIGR00900 291 ILVVGLTP---------------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGR 337 (365)
T ss_pred HHHHHhhc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHH
Confidence 55554430 125566777889999999999999999999999888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~g 257 (540)
..++++...++|..++|.+++++.+..|
T Consensus 338 ~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 338 VFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999988654
No 160
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=4e-09 Score=108.10 Aligned_cols=182 Identities=13% Similarity=-0.009 Sum_probs=136.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
+..|...+.-+...-+|-++..+++.|++++++.++.+++.....+.+...+.++++|+||||+ |.+|++++.....++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 3677788888888888888889999999999999999999999999999999999999999998 888888887777777
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
+..+....... .. .+.+...+++..+..++..|.-...+..+++..||+ + -+
T Consensus 297 ~~~~l~~~~~~---~~------------------~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~------~G 348 (417)
T COG2223 297 AAALLSLFLTG---FG------------------HGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-E------TG 348 (417)
T ss_pred HHHHHHccccc---cc------------------cCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-h------hh
Confidence 76666554110 00 002233333333444444444455556666666664 2 57
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHHh
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~~ 279 (540)
...++.....++|+..-|...+...+.+| +...|++.....+++.++....
T Consensus 349 ~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 349 AVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888889999999999999999888 8999998888777776665543
No 161
>PRK10504 putative transporter; Provisional
Probab=99.07 E-value=8e-09 Score=111.21 Aligned_cols=156 Identities=10% Similarity=-0.026 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
....+...++..+++.......+.|++..+|.+..++++......++..++.++.|+++||+ |||+++.++.++..++.
T Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~ 341 (471)
T PRK10504 263 FSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVS 341 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHH
Confidence 34455555566666555555677788878999999999888888888888889999999998 99999998888777766
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+++..... . .+...+.+..++.|++.+...+....+..+.+|++. |+..
T Consensus 342 ~~~~~~~~------~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~ 390 (471)
T PRK10504 342 LLFMLVAL------L-------------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSG 390 (471)
T ss_pred HHHHhccc------c-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccch
Confidence 65544210 0 223334455667788888888888899999999887 9999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
+++++....+|..+|+.+++.+.+..|+
T Consensus 391 ~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 391 NSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999888765554
No 162
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.07 E-value=7.4e-08 Score=101.66 Aligned_cols=183 Identities=13% Similarity=0.126 Sum_probs=131.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHH-HHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWT-IAIFTT 144 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~-i~i~~~ 144 (540)
+.-+.-.+..+..++.+-.+..++..|.++.+|++...++.+..+.-+.-++.-|+.|.++||. +||+|- ++++.+
T Consensus 12 ~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i 91 (467)
T COG2211 12 KEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI 91 (467)
T ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH
Confidence 3344445566677777777888999999999999999999999999999999999999999985 476554 455667
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
.+.+...++..+ |+ .+ ........++.-++.+++.........++.+|+.++.++
T Consensus 92 p~~i~~~l~F~~-------p~--~~-------------~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E--- 146 (467)
T COG2211 92 PFAIVAVLLFIT-------PD--FS-------------MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE--- 146 (467)
T ss_pred HHHHHHHHHHcC-------CC--cc-------------cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH---
Confidence 777777777654 21 00 003445556666788999999998899999999976543
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhh-------ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQM-------EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~-------~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|.+..++-....++|..+..++...+.. ..||+...++..++..+.++..++
T Consensus 147 --R~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~ 205 (467)
T COG2211 147 --RASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFF 205 (467)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888886666555544433 235665555555555444444444
No 163
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.06 E-value=1.5e-08 Score=106.23 Aligned_cols=167 Identities=7% Similarity=-0.097 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++...+..++....+.....+++.|+. +.|.+..+.+...+...++..+..++.|++.||+ |+|+.+.++.++..++
T Consensus 206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~ 283 (382)
T PRK11128 206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVR 283 (382)
T ss_pred hHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHH
Confidence 4454555555555556566677788885 5899998889888888888888889999999997 9999999988888877
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++... .+.+.+++..++.|++.+...+....++.+. ++++ +++
T Consensus 284 ~~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~ 328 (382)
T PRK11128 284 WGLMGST----------------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIR 328 (382)
T ss_pred HHHHHhh----------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHH
Confidence 7666543 4566777788899999888888888887776 4444 667
Q ss_pred HHHHHH-HHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFY-LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (540)
Q Consensus 230 ~~~~~~-~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~ 274 (540)
..+++. ....+|..+||.++|++.+..|+. .+++.+++.+++++
T Consensus 329 ~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~~ 373 (382)
T PRK11128 329 LQALYSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHH
Confidence 777765 556778889999999999998874 55555554444433
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.06 E-value=7.2e-09 Score=109.01 Aligned_cols=168 Identities=12% Similarity=0.074 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
.++..++....+.......+.|+.+.+ +.+....+...+...+...++.++.|++.||+ |||+.+.++.++..++.
T Consensus 220 ~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~ 298 (396)
T TIGR00882 220 FVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRI 298 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHH
Confidence 333334444444344456678887765 45556678788888888888889999999998 99999999888888877
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
.+...+ .+...+++..++.|++..........+..+.++++. +++.
T Consensus 299 ~~~~~~----------------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~ 344 (396)
T TIGR00882 299 IGSSFA----------------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATI 344 (396)
T ss_pred HHHHhc----------------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEe
Confidence 665543 345566777888888876665666667788888777 7777
Q ss_pred HHH-HHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 231 FNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 231 ~~~-~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
.+. ++....+|..+++.++|++.+..||+..|.+.++..++..+..
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 766 6778899999999999999999999999988777765555443
No 165
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.05 E-value=1.1e-08 Score=109.93 Aligned_cols=178 Identities=16% Similarity=0.072 Sum_probs=122.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHH-------
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI------- 139 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i------- 139 (540)
+++.++...+..++....++.+..++|.|+++.+|++..++++..++..++..++.+++|+++||+ ++|+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~ 337 (465)
T TIGR00894 259 KSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARK 337 (465)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHH
Confidence 345678888888899999999999999999999999999999999999999999999999999987 544211
Q ss_pred -HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 009195 140 -AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (540)
Q Consensus 140 -~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (540)
..+......+..++..... . .+....++...+.+.+.++..+.......|..|.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~-----~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 392 (465)
T TIGR00894 338 IFNGIGGLGPGIFAYALPYL-----S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR 392 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHc-----C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh
Confidence 1111111111111111100 0 1223333344455555555555555555566654
Q ss_pred CCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhcc---chHHHHHHHHHHHHHHHHHHH
Q 009195 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH---GWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 219 ~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~---gw~~~f~i~~i~~~~~~~~~~ 277 (540)
. ++...++.+...++|+.++|.+.+++.+.. +|...|.+.++..+++.++..
T Consensus 393 -~------~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 393 -F------LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred -H------HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 5 899999999999999999999999987643 388888887777666655543
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.05 E-value=1.8e-08 Score=105.66 Aligned_cols=169 Identities=11% Similarity=-0.005 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
+......++.....+....++++|+.+.+|++..+.+...+...++..++.++.|+++||+ |||+.+.++.++..++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~ 280 (382)
T PRK10091 202 WLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALL 280 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHH
Confidence 3333444444445555566778888888999999999999999999999999999999998 999999988887777765
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhh-hhhccCCCCCchhhhhhhhH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSS-FGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~d~~~~~~~~~~~~R~~~ 230 (540)
+..... .+.....+..++.+++.++..+.... ...+..+++. ++..
T Consensus 281 ~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~ 327 (382)
T PRK10091 281 MLFFFG---------------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA 327 (382)
T ss_pred HHHHHH---------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH
Confidence 554321 12233444445555555443333333 3334333333 3433
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~-~gw~~~f~i~~i~~~~~~~~~ 276 (540)
..+....+|..+||.+++++.+. .+|++.+.+.++..++.....
T Consensus 328 --~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 328 --GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred --HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 33556789999999999999885 579998888776655544443
No 167
>TIGR00895 2A0115 benzoate transport.
Probab=99.04 E-value=6.6e-09 Score=108.22 Aligned_cols=148 Identities=14% Similarity=0.032 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
+..+...+..++....++.+..+++ ++.+++|.+..+.+...+...++..++.+++|+++||+ |||+.+....+..++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 327 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHH
Confidence 3445555555566667767777776 77778999999999999999999999999999999998 998554444333333
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
..++.... .+...+++..++.|++.++..+...++++|.+|++. |+
T Consensus 328 ~~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g 373 (398)
T TIGR00895 328 AVLVGSTL----------------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RA 373 (398)
T ss_pred HHHHHHHh----------------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HH
Confidence 32222211 234456667788999999999999999999999888 99
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHh
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYI 252 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l 252 (540)
+.+++++....+|..++|.++|++
T Consensus 374 ~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 374 TGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhc
Confidence 999999999999999999999875
No 168
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.03 E-value=9.1e-08 Score=98.85 Aligned_cols=163 Identities=12% Similarity=0.018 Sum_probs=111.2
Q ss_pred ccccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Q 009195 61 DLSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
.+..++||..++...+..+.+.+... -......|.+..+| +...+-|...+|.+.+....+.+-|+.|++ |=|.+.+
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI-~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~l 113 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWI-QYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALL 113 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchhe-eehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHH
Confidence 35567777655555555555544432 12334557777788 666677888999999999999999999997 9999999
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhH--HHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 009195 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM--LYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (540)
Q Consensus 141 i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (540)
++.++-.+|..+=..+... . .+ ... ...+.|..+.+...-.+...-+-..+-+|++
T Consensus 114 lgt~ln~iGa~Ir~iss~p-~-v~--------------------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~ 171 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLP-F-VP--------------------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPP 171 (480)
T ss_pred HHHHHHHHHHHHhhhccCc-c-cc--------------------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCc
Confidence 9999999998887765320 0 01 112 2555666666666555444444556677898
Q ss_pred CCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 219 ~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
++ |.++-.+-.++..+|.+++.++...+..
T Consensus 172 ~q------ra~A~~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 172 DQ------RAIATVLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred ch------hhhhhhHHHhcchHHHHHHhhccceecC
Confidence 88 8888887666666777777666555543
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.03 E-value=1.7e-08 Score=105.90 Aligned_cols=174 Identities=7% Similarity=-0.093 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH-HHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.+......++...+......+.+.|+.+ .|++.++.+++..... ....++.+++|++.||+ |+|+.+.++.++..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 287 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 3444444455555565666777888875 7999999998888765 46667789999999998 9999998877665333
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~R~ 228 (540)
.+....... .... .+...++....+.+++.|...+...+...+..++ +. ++
T Consensus 288 ~~~~~~~~~-~~~~---------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g 339 (390)
T TIGR02718 288 ALLWFAQAA-FWLA---------------------PGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AG 339 (390)
T ss_pred HHHHHHHHH-cccC---------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hH
Confidence 222221110 0000 1222333334455566666666667776676665 56 89
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM 274 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~ 274 (540)
+.+++++...++|..++|.++|++.+..||+..|.+.+++.+++.+
T Consensus 340 ~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 340 TDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888877766555543
No 170
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.03 E-value=6.4e-09 Score=113.18 Aligned_cols=169 Identities=15% Similarity=0.102 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH------------HHHHHHHHHHHHHhHHHHHhhhccchHHHHHHH
Q 009195 75 FGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN------------AVNNFLGISQASSVLGGFLADAYLGRYWTIAIF 142 (540)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~------------~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~ 142 (540)
....++..+.+|++..+.|.+++ ..|++..+++. ......++..++.+++++++||+ |||++++++
T Consensus 294 ~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~ 371 (502)
T TIGR00887 294 AGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMG 371 (502)
T ss_pred HHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHH
Confidence 33445556677888777777775 67876432211 22333445566778899999998 999999888
Q ss_pred HHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch
Q 009195 143 TTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD 222 (540)
Q Consensus 143 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~ 222 (540)
.++..++.+++...... .+ .+ ..+....+...++..+..+....+.+|.+|++.
T Consensus 372 ~~~~~~~~~~l~~~~~~---~~--------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~-- 425 (502)
T TIGR00887 372 FFILTVLFFVLGFAYNH---LS--------------------TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY-- 425 (502)
T ss_pred HHHHHHHHHHHHHHHHh---cc--------------------hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH--
Confidence 87777666555543110 00 11 111111111222223344566677899999999
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc----------cchHHHHHHHHHHHHHHHHH
Q 009195 223 YKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 223 ~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~----------~gw~~~f~i~~i~~~~~~~~ 275 (540)
|+++.++.+....+|+.++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 426 ----R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 426 ----RSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred ----HHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998774 33455666666555555443
No 171
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.02 E-value=7.3e-09 Score=111.63 Aligned_cols=155 Identities=13% Similarity=0.096 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+...+..++..+.+++...+++.|+++.+|.+..++++......++..++.+++|++.||+ |||+.+.++.++..++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~ 334 (485)
T TIGR00711 256 NFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVG 334 (485)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHH
Confidence 344455666667777778888899999999999999999999999999999999999999998 9999999888887777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
..++..... +. .+...+....++.|+|.+...+.......+.+|++. |++
T Consensus 335 ~~~~~~~~~-----~~-------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~ 384 (485)
T TIGR00711 335 FYWRAFTFT-----PD-------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IAR 384 (485)
T ss_pred HHHHhccCC-----CC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhH
Confidence 766553210 11 234455566788999998887777777788888877 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQME 255 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~ 255 (540)
+.++++...++|+.+|+.+.+.+.++
T Consensus 385 ~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 385 GSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888764
No 172
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.01 E-value=2.3e-08 Score=107.72 Aligned_cols=157 Identities=10% Similarity=-0.038 Sum_probs=109.7
Q ss_pred HHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccc
Q 009195 94 TFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (540)
Q Consensus 94 ~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (540)
+++.+.+|.+.....+......++..++.+++|+++||+ |||+.++++.++..++.+++...... +.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~----~~-------- 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYT----QA-------- 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhc----Cc--------
Confidence 344467888877777777777778889999999999998 99999999999888887776543110 00
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHhhcc-cchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH--
Q 009195 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAG-IRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV-- 250 (540)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~-- 250 (540)
.. .....+.++.+++.+. ..++...+++|.+|++. |++++++.+...++|..+++.+.+
T Consensus 362 -----------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~ 423 (479)
T PRK10077 362 -----------PG-IVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMM 423 (479)
T ss_pred -----------cc-HHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 11 1222333444444433 34677899999999888 999999988888888877755544
Q ss_pred ----HhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 251 ----YIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 251 ----~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
++.+..+|++.|++.++..+++.++.++..+
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 424 DKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HhccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 4446778888888877666655555544433
No 173
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.01 E-value=1e-08 Score=109.13 Aligned_cols=160 Identities=16% Similarity=0.057 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++..++..++..++.+......+.|++..++ +....+.......++..++.+++++++||+ |||+++.++.++..++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~ 300 (437)
T TIGR00792 223 QLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLG 300 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 45555666666666666555555555555555 455666777777888899999999999998 9999999998888877
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch-hhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-YKTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~-~~~~R~ 228 (540)
.+.+.+.. .+...+++..++.|++.+...+...++++|..+.++.+ ....++
T Consensus 301 ~~~~~~~~---------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 353 (437)
T TIGR00792 301 YLIFFFAG---------------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEG 353 (437)
T ss_pred HHHHHHcc---------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchH
Confidence 76665420 23445566677889999988899999999987632110 001178
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
..++++++...+|..+++.+.+++.+..||
T Consensus 354 ~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 354 LVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999999999877665
No 174
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.00 E-value=7.8e-09 Score=103.65 Aligned_cols=147 Identities=13% Similarity=0.124 Sum_probs=100.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------hhCCC--hHHHHHHHHHHHHHHHHHHhHHHHH
Q 009195 68 WIAALFIFGNEMAERMAYFGLSVNMVTFMFY-----------------VMHKS--FADSSNAVNNFLGISQASSVLGGFL 128 (540)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-----------------~lg~~--~~~~~~~~~~~~~~~~~~~~~~G~l 128 (540)
.+..+.+..+-|.+.+.+|++.-......+. ..+-. ...--.=+.+..+.-.-|.++.+++
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~i 404 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVI 404 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHH
Confidence 3455666667788888888865433222221 11111 1111122233445667788999999
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhh
Q 009195 129 ADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 208 (540)
Q Consensus 129 sD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 208 (540)
.||+ |||+++..+.+++.+..+++..+.. ++ .-..+++.+|++ ..+...+.
T Consensus 405 verl-GRKkTMal~l~~f~iflfll~~c~~-----rn-------------------~~tvllf~araf----isg~fqva 455 (528)
T KOG0253|consen 405 VERL-GRKKTMALSLILFGIFLFLLTTCKT-----RN-------------------AYTVLLFTARAF----ISGAFQVA 455 (528)
T ss_pred HHHh-cchhHHHHHHHHHHHHHHHHHHhcC-----cc-------------------hhHHHHHHHHHH----HhchheEE
Confidence 9997 9999999999999998888776522 11 112344455544 44456677
Q ss_pred hhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 009195 209 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (540)
Q Consensus 209 ~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~ 249 (540)
..|-.|.+|+.. |+++.+.-.....+|+++.|+|+
T Consensus 456 YvYtPEVyPTav------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 456 YVYTPEVYPTAV------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred EEecCcccchhh------hhcchhhhhhHHhhhhhhhhHHH
Confidence 899999999999 99999998888999999999998
No 175
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.99 E-value=3e-08 Score=107.83 Aligned_cols=169 Identities=10% Similarity=0.045 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~ 153 (540)
++...++.++....+...+|.+..+.+|.+....+++.+.+.+|..+|.++.+++.+++ ++++.+..+.+++.++.+.+
T Consensus 223 ~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~l 301 (524)
T PF05977_consen 223 VLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLL 301 (524)
T ss_pred HHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHH
Confidence 33444444444444556678888999999999999999999999999999999999997 99999888888888777777
Q ss_pred HHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHH
Q 009195 154 TLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNF 233 (540)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~ 233 (540)
+++ .+.+..++..++.|++.........+.+-+..|++. ||+.+++
T Consensus 302 al~----------------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si 347 (524)
T PF05977_consen 302 ALS----------------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSI 347 (524)
T ss_pred hcc----------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHH
Confidence 665 456677778889999998888888899999999998 9999999
Q ss_pred HHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 234 FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 234 ~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
++.....+..+|..+.|++.+.+|-+..+.+.++..+++.++..
T Consensus 348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888777666555555443
No 176
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=1.2e-08 Score=104.61 Aligned_cols=174 Identities=13% Similarity=0.090 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.+.+-+++.++.+=+--.+.+....|....+|++..+..++.....+..+++++++|+|.||+ |-|+++.++.+++.+.
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~ 331 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIA 331 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHH
Confidence 455555555666666667778888999999999999999999999999999999999999997 9999999999888776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+...+. .....+++.-.+.|+..|+.++..=++.++++|+++ -++
T Consensus 332 ~~~~~~~----------------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~ 377 (438)
T COG2270 332 ALYLIFL----------------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGR 377 (438)
T ss_pred HHHHHHc----------------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccc
Confidence 5554442 223345555568999999999999999999999988 899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~ 278 (540)
+|++|++....++.+||...+.+.+.+| -|.++....++..++++++..
T Consensus 378 fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 378 FFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred eeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 9999999999999999999999988776 677776666666666655443
No 177
>PRK10133 L-fucose transporter; Provisional
Probab=98.98 E-value=2.9e-08 Score=106.11 Aligned_cols=165 Identities=10% Similarity=0.018 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
..+..++.....++...+.+.|+ ++.+|++..++++....+.++..++.+++|+++||+ |||+++..+.++..++.++
T Consensus 263 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~ 341 (438)
T PRK10133 263 AVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 33444555566666677888886 567899999999999999999999999999999997 9999998887776665544
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
..+. .+. ..+.+..+.|++.+...|+..+...+.++++. +.+.+
T Consensus 342 ~~~~----------------------------~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~-------~~as~ 385 (438)
T PRK10133 342 SAFA----------------------------GGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT-------KYGSS 385 (438)
T ss_pred HHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh-------ccchh
Confidence 4332 111 22455678999999999999999999987532 23333
Q ss_pred HHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHH
Q 009195 233 FFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 233 ~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~ 276 (540)
+... ..+|+.++|.+.+++.+.+| -+..|++.+++.+..+...
T Consensus 386 l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~~ 429 (438)
T PRK10133 386 FIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFA 429 (438)
T ss_pred HHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 3222 33578888899999999887 7888887776655554443
No 178
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.97 E-value=6.6e-08 Score=100.60 Aligned_cols=160 Identities=13% Similarity=0.081 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
...+...+....++....+.+.|+++.+|.++.+.+.+.....++..++.+++|+++||+ |||+.+.++.++..++.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~ 288 (385)
T TIGR00710 210 GYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVL 288 (385)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHH
Confidence 333334444555566667778888889999999999999999999999999999999998 9999998888777776666
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
+...... +. .....++...++.|++.+...+.......|.+| +. |++..+
T Consensus 289 ~~~~~~~----~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~ 338 (385)
T TIGR00710 289 LEITAIL----GL-------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASA 338 (385)
T ss_pred HHHHHHh----cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHH
Confidence 5543210 00 123344555677888888888888888888876 45 788888
Q ss_pred HHHHHHhH-HHHHHHHHHHHhhhccchHHHHHH
Q 009195 233 FFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGA 264 (540)
Q Consensus 233 ~~~~~~~l-g~~i~p~i~~~l~~~~gw~~~f~i 264 (540)
+++..... |+..++. .+.+.+..+|...+..
T Consensus 339 ~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 339 LFGTLRLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 87766554 5555554 4455554455544433
No 179
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.97 E-value=1.5e-08 Score=110.05 Aligned_cols=153 Identities=13% Similarity=0.052 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
......+..++..+.+++...+++.|++..+|++..+++.......++..++.+++|++.||+ |||+.+..+.++..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~ 338 (495)
T PRK14995 260 IILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALS 338 (495)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 445555666667777777778889999999999999999999999999999999999999998 9999988888887777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++..... . .+....+...++.|+|.|...+.......+..|+++ ++.
T Consensus 339 ~~~l~~~~~------~-------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~ 387 (495)
T PRK14995 339 FYGLAMTDF------S-------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAA 387 (495)
T ss_pred HHHHHHhcC------C-------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cch
Confidence 766544210 0 223445567788999999988888888888899888 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
+.++++...++|+.+|+.+.+.+.+
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988765
No 180
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.96 E-value=2.4e-08 Score=119.37 Aligned_cols=162 Identities=10% Similarity=-0.014 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChH-HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA-DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
++..++..++..+..+.+..+++.|+.+.+|++.. +.+++.+...++..++.+++|+++||+ ++++++.++.++..++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~ 312 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALS 312 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHH
Confidence 33444444444455556677889999999999998 899999999999999999999999997 9999888887777776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++.+. .+...++++.++.|++.++..+...+++.+.+|++. |++
T Consensus 313 ~~~~~~~----------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~ 358 (1146)
T PRK08633 313 LFLLPTA----------------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGK 358 (1146)
T ss_pred HHHHHHh----------------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhh
Confidence 6666543 345566677788999999888889999999999998 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhh-ccchHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAI 267 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~-~~gw~~~f~i~~i 267 (540)
+++++++..++|..+++.+++.+.. .+++...|++.+.
T Consensus 359 ~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 359 VLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999998888877776644 2345555554433
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.96 E-value=7.8e-08 Score=101.48 Aligned_cols=153 Identities=15% Similarity=0.209 Sum_probs=103.7
Q ss_pred HHHHHHHHhhCCChHHHHHHHHHH-HHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 009195 91 NMVTFMFYVMHKSFADSSNAVNNF-LGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (540)
Q Consensus 91 ~~~~yl~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 169 (540)
+.+.++.+++|++..+.+++.... .++..++.+++|+++||+ |||+.+.++.++..+..+.+...... +
T Consensus 231 ~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~----~----- 300 (402)
T PRK11902 231 LSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVT----P----- 300 (402)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhc----C-----
Confidence 445577788999999998887654 456788899999999998 99998887777666554433321110 0
Q ss_pred cccccccCCCCCccchhHHHHHHHH----HHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHH
Q 009195 170 DRISQLLGSCEPAKSWQMLYLYTVL----YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (540)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~ 245 (540)
.+...+++.. +..|++.+...+....++.+.+|.++ ++ ++.....+|..++
T Consensus 301 ---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~l~~~~~ 355 (402)
T PRK11902 301 ---------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------YA----LLSALASVGRVYV 355 (402)
T ss_pred ---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------HH----HHHHHHHHHHHHH
Confidence 1233333333 35566667777777778888777544 43 3333345666656
Q ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 246 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 246 p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
..++|++.+..||+..|.+.+++.++++++...
T Consensus 356 ~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 356 GPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 668999999999999999888777666555443
No 182
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.94 E-value=1.2e-07 Score=99.98 Aligned_cols=164 Identities=10% Similarity=-0.020 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH-
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG- 149 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~- 149 (540)
++......++.....++...+.++++.+++|++..+.+.+.....++..++.++.|++.||. +|+ .++++.++..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~~ 295 (394)
T PRK10213 218 VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHHH
Confidence 34444444555555556666665555568899999999999999999999999999999985 544 433343333333
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.++.... .+...+.+..++.|++.+...+...+++.+..|+ + +++
T Consensus 296 ~~l~~~~----------------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~------~~~ 340 (394)
T PRK10213 296 LVLTLWG----------------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLAD-Q------AEK 340 (394)
T ss_pred HHHHHHh----------------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcc-c------HHH
Confidence 2322221 2345566677888999998888888888888873 3 445
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~ 271 (540)
..++++...++|..+|+.++|++.+..|++..+...++..++
T Consensus 341 ~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~ 382 (394)
T PRK10213 341 AGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLL 382 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHH
Confidence 556666677899999999999999999988887776654433
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.92 E-value=4.7e-08 Score=101.13 Aligned_cols=153 Identities=14% Similarity=0.061 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+...+..++....++++..+++.|+++ .|++..+.+...+...++..++.++.|+++||+-+||+++.++.++..++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 276 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVG 276 (355)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Confidence 44555555566667777888889999975 79999999999999999999999999999999734666777777777777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+.+.+.. .+. .. ...++.|++.|...+...+.+.+..++++. +++
T Consensus 277 ~~~~~~~~---------------------------~~~-~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-----~g~ 322 (355)
T TIGR00896 277 LCGLLFAP---------------------------MHG-LW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ-----AAA 322 (355)
T ss_pred HHHHHHhh---------------------------hhH-HH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH-----HHH
Confidence 66665431 111 11 134578999988888877777665553221 677
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~g 257 (540)
..++.+...++|..++|.+.+++.+++|
T Consensus 323 ~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 323 LSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8888777888899999999999998876
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=4.1e-08 Score=103.72 Aligned_cols=153 Identities=11% Similarity=0.021 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 009195 88 LSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (540)
Q Consensus 88 ~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~ 167 (540)
...++|.|+++..+ ++.+.++..+...++...+....+++.||.++.++.+..+.++..++.+++...
T Consensus 227 ~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~----------- 294 (400)
T PRK11646 227 VMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV----------- 294 (400)
T ss_pred HHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----------
Confidence 44567888876655 556777776666555554444446666554376677777777777776666543
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 009195 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (540)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~ 247 (540)
.+...+.+..++.+++.+...+...+++.|..|++. |++.+++++...++|..+||.
T Consensus 295 -----------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~ 351 (400)
T PRK11646 295 -----------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYI 351 (400)
T ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhccc
Confidence 234445556677788888888888999999999988 999999999999999999999
Q ss_pred HHHHhhhccc----hHHHHHHHHHHHHHHHHH
Q 009195 248 LVVYIQMEHG----WGSAFGALAIAMGISNML 275 (540)
Q Consensus 248 i~~~l~~~~g----w~~~f~i~~i~~~~~~~~ 275 (540)
++|++.++.+ ....+++..+..++..+.
T Consensus 352 l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 352 GGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred chHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9999987642 244444444444444333
No 185
>PRK10054 putative transporter; Provisional
Probab=98.90 E-value=3.9e-08 Score=103.66 Aligned_cols=170 Identities=12% Similarity=-0.012 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYV--MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~--lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
...+..++..+.+.....+.+.|+... .+.+....+.+.....+......++.|++.||. |||+.+.++.++..++.
T Consensus 210 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~~ 288 (395)
T PRK10054 210 WFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIGL 288 (395)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHHH
Confidence 333444444444444445556666543 345555666777777666666677889999997 99999998888888877
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
+.+.+.. .+...+++..++.|+|.+...+...+++.+..|++. |++.
T Consensus 289 ~~~~~~~---------------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~ 335 (395)
T PRK10054 289 VGFIFSG---------------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASY 335 (395)
T ss_pred HHHHHcc---------------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceeh
Confidence 7665431 234455667788999988888888889999999887 8888
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~ 277 (540)
++... ...+|..+||.++|++.++.|....|++.+...++++++..
T Consensus 336 ~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 336 FSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 87654 56689999999999999999988888876666666655544
No 186
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.89 E-value=1.3e-07 Score=100.70 Aligned_cols=183 Identities=14% Similarity=0.010 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..|...+.-++...+|.+...++|.|+++.+ +.........+..+...+..+++|+||||+ ||+++++++.++..++
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHH
Confidence 4566666667766666667778888988755 333333344456778888999999999998 9999999988877776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc--------
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK-------- 221 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~-------- 221 (540)
..++.... |. ....+...+.++.+...++.|.-.+.+..++++.||+...
T Consensus 330 ~~~~~l~l------p~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~ 387 (462)
T PRK15034 330 SALLFLTL------PG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGG 387 (462)
T ss_pred HHHHHHHh------cc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhccccccc
Confidence 65443321 11 0002455555555555555566566667777777764100
Q ss_pred -------hhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHH
Q 009195 222 -------DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 222 -------~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~ 277 (540)
..+..-+...++......+|+.+-|.+.++..+.+| +...|++..+..++++++.+
T Consensus 388 ~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 388 SDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred chhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 000124566666777778888888988787777665 88888877666555544433
No 187
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.87 E-value=1.1e-06 Score=96.76 Aligned_cols=207 Identities=14% Similarity=0.103 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
+..+.+..+...+.. +......+.+.+.++++.++.+++.+.+-++..+...+..+.+-|. =|-+.+-++.++..+|.
T Consensus 99 l~~l~~~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGS 176 (735)
T ss_pred HHHHHHHHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHH
Confidence 344444445555554 6666677888899999999999999999999999999999999986 67778889999999999
Q ss_pred HHHHHhhhcccc------C---C--C------CCccccccc----ccCCCCC--ccch-hHHHHHHHHHHHHHhhcccch
Q 009195 151 TGITLCATMKVF------M---P--N------QDNCDRISQ----LLGSCEP--AKSW-QMLYLYTVLYITGFGAAGIRP 206 (540)
Q Consensus 151 ~~~~~~~~~~~~------~---~--~------~~~~~~~~~----~~~~~~~--~~~~-~~~~~~~~~~l~g~g~g~~~~ 206 (540)
+++++.-....- . . + .+.|+.... .+.+|+. .... -+.+++++.++.|+|...+++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 988875211000 0 0 0 000110000 0112221 1111 233667888999999999999
Q ss_pred hhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh------------------ccc-hHHHHHHHHH
Q 009195 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM------------------EHG-WGSAFGALAI 267 (540)
Q Consensus 207 ~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~------------------~~g-w~~~f~i~~i 267 (540)
...+|+=|-...+. -...+++.+....+|+++|.++++++.+ +.| |+.+|.+...
T Consensus 257 lGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~ 330 (735)
T KOG3626|consen 257 LGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGA 330 (735)
T ss_pred CCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHH
Confidence 99999999888877 7788899999999999999999987643 123 8889988888
Q ss_pred HHHHHHHHHHHhcccccc
Q 009195 268 AMGISNMLFFIGTPLYRH 285 (540)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~ 285 (540)
+.++..+.+++..+.+++
T Consensus 331 ~~~~~a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 331 LLLFSAVPLFFFPKELPK 348 (735)
T ss_pred HHHHHHHHHHhCcccCcc
Confidence 887777777776655543
No 188
>TIGR00898 2A0119 cation transport protein.
Probab=98.85 E-value=4.8e-08 Score=106.13 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=95.1
Q ss_pred HHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHH
Q 009195 113 NFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYT 192 (540)
Q Consensus 113 ~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (540)
...+....+.+++++++||+ |||+++.++.++..++.+++.+. +. .......+
T Consensus 363 ~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~-------~~-------------------~~~~~~~~ 415 (505)
T TIGR00898 363 ISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV-------PV-------------------DLYFLRTA 415 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc-------CC-------------------CchHHHHH
Confidence 44556677888899999997 99999999988877776665543 11 11223334
Q ss_pred HHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 193 VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGIS 272 (540)
Q Consensus 193 ~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~ 272 (540)
..++.+++.++..+....+.+|.+|++. |++++++.+....+|+.++|.+.+ + ...++..++.+.++..+++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 416 LAVLGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHH
Confidence 4455666667777888899999999988 999999999999999999999988 4 3345666666666655555
Q ss_pred HHHHHH
Q 009195 273 NMLFFI 278 (540)
Q Consensus 273 ~~~~~~ 278 (540)
.++.++
T Consensus 488 ~~~~~~ 493 (505)
T TIGR00898 488 GILTLF 493 (505)
T ss_pred HHHHHc
Confidence 444433
No 189
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=6.5e-08 Score=103.65 Aligned_cols=162 Identities=14% Similarity=0.113 Sum_probs=118.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++...+..++...+++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..++
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~ 307 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCG 307 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 345555666666666666666667777888888776666555555666788889999999998 9999999999888887
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~R~ 228 (540)
.+.+.+. +. .+.+.+++..++.|+|.+...+...++.+|..|.++.+. ...++
T Consensus 308 ~~~~~~~-------~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G 361 (448)
T PRK09848 308 YLLFFWV-------SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEG 361 (448)
T ss_pred HHHHHHc-------Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchh
Confidence 7666542 11 245556667788999999999999999999887543110 01147
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
..++++++...+|..+++.+.+.+.+..||
T Consensus 362 ~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 362 LTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 788889999999999999998887655444
No 190
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.84 E-value=2e-07 Score=97.40 Aligned_cols=166 Identities=10% Similarity=-0.038 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---HHHHH-HHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY---WTIAI-FTT 144 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~---~~i~i-~~~ 144 (540)
+..+.+.+..++....+|++..++|.|+.+ .|++.. .+....+..+... +..++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHHH
Confidence 356778888889999999999999999964 678764 4444444444333 3457888886 543 33222 332
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
+..+........ .+....++...+.+++.....+...++.+|.+|++.
T Consensus 266 ~~a~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~---- 313 (368)
T TIGR00903 266 LIAAFFLALAFE----------------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL---- 313 (368)
T ss_pred HHHHHHHHHHHc----------------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh----
Confidence 222222222211 112233344456677777777778899999999999
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~ 276 (540)
|+++.++.+...++|+.++|.+.+.+.. +....|.+.++..+++.+..
T Consensus 314 --rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 314 --HGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred --cCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887763 56666666655555554443
No 191
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.83 E-value=9.1e-08 Score=114.42 Aligned_cols=184 Identities=6% Similarity=-0.165 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++...+..++..+.++.+.++++.|+++.+|.+....+++.+.+.++..++.++.|+++|+. ++++.+.++.++..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 304 (1140)
T PRK06814 226 RIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLF 304 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHH
Confidence 455556656666666667778899999999999999999999999999999999999999987 7666665555555444
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+.+.+... ....+....+. .-......+.+.++++.++.|++.+...+...+++.+.+|++. |++
T Consensus 305 ~~~l~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~ 370 (1140)
T PRK06814 305 GLDLAFASS-SVPAEPAQLKS-------ILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RAR 370 (1140)
T ss_pred HHHHHhccc-ccccccccccc-------hhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------cee
Confidence 443332100 00000000000 0000000134456677788899999999899999999999999 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhh-ccchHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQM-EHGWGSAFGALAIA 268 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~-~~gw~~~f~i~~i~ 268 (540)
.++.+++...+|..+++++++.+.. ..++...+++.+++
T Consensus 371 v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 371 VIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999999999999999988874 34566665544443
No 192
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.5e-07 Score=98.54 Aligned_cols=196 Identities=14% Similarity=0.068 Sum_probs=130.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+...+.....+...+...+.-.....+..+.+-+.-|++..++.++.........+..+++.++.||+ |||+.++++..
T Consensus 265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~ 343 (485)
T KOG0569|consen 265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLS 343 (485)
T ss_pred cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHH
Confidence 33444566666666666665544444456667778899999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhc-ccchhhhhhhhccCCCCCchh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAA-GIRPCVSSFGADQFDERSKDY 223 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~d~~~~~~~~~ 223 (540)
+..+..+++........... .+-....+++.++..++.+ +..|...-+.+|+||+..
T Consensus 344 ~~~~~~~~~~~~~~l~~~~~-------------------~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~--- 401 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSFG-------------------SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA--- 401 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc---
Confidence 98888877776543110000 0000112334444433333 345677788899999998
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 009195 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL 287 (540)
Q Consensus 224 ~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~~ 287 (540)
|..++++-+....+...+..+.-..+.+..|- ..|.+.++..++..+..+...|+.+.+.
T Consensus 402 ---R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 402 ---RSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 99999886666656555555555566666664 4555556656666666666666665543
No 193
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.82 E-value=5.3e-06 Score=85.61 Aligned_cols=142 Identities=14% Similarity=0.019 Sum_probs=98.5
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-----hHHH-HHHHHHHHHHHHHHHHHhhhccccCCCCCcc
Q 009195 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-----RYWT-IAIFTTIYLAGLTGITLCATMKVFMPNQDNC 169 (540)
Q Consensus 96 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~G-----R~~~-i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 169 (540)
+..+++++....+..+.+-.+... ..+..|+.||+. + ||.- +..+.++...+..+...+.... ...
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l--~~~---- 77 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLL--AES---- 77 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHH--ccc----
Confidence 456788888888877776665544 578999999997 6 5544 4455666666666655543211 010
Q ss_pred cccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 009195 170 DRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (540)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~ 249 (540)
....+.+.........+...+.|+|.+.......++++|..|+++ |.+..++.+....+|..++.++.
T Consensus 78 ------~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 78 ------GQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred ------ccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHH
Confidence 000011111122233445567899999999999999999999999 99999998888889999999999
Q ss_pred HHhhhccc
Q 009195 250 VYIQMEHG 257 (540)
Q Consensus 250 ~~l~~~~g 257 (540)
+.+.+.+.
T Consensus 146 g~lL~~~s 153 (403)
T PF03209_consen 146 GRLLDPFS 153 (403)
T ss_pred HHHccccC
Confidence 98887766
No 194
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.82 E-value=1e-06 Score=90.66 Aligned_cols=127 Identities=13% Similarity=0.002 Sum_probs=82.9
Q ss_pred HHHHHHHHHHhhCC---Ch----HHHHHHHHHHHHHHHHHHhHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009195 89 SVNMVTFMFYVMHK---SF----ADSSNAVNNFLGISQASSVLGGFLADAYLG-RYWTIAIFTTIYLAGLTGITLCATMK 160 (540)
Q Consensus 89 ~~~~~~yl~~~lg~---~~----~~~~~~~~~~~~~~~~~~~~~G~lsD~~~G-R~~~i~i~~~l~~i~~~~~~~~~~~~ 160 (540)
....+.|+++..+. ++ +..+...++..+..++..|+-|-++|+. | ||+.+.+..++.++..+.+.++.
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i~--- 110 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFIP--- 110 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHhC---
Confidence 34567888877654 33 2335666667777778888999999987 7 55666677777777777776651
Q ss_pred ccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhH
Q 009195 161 VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (540)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~l 240 (540)
+ +..+....+...+..++.........+++.|..++++-+ |.+..++ -...+
T Consensus 111 ----~------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~----riS~lg~--~~gyl 162 (438)
T COG2270 111 ----P------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMG----RISGLGW--ALGYL 162 (438)
T ss_pred ----C------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccC----ccccccc--ccccc
Confidence 1 023444555556778888888888899999999987744 4444433 22334
Q ss_pred HHHHHHH
Q 009195 241 GAIVAFT 247 (540)
Q Consensus 241 g~~i~p~ 247 (540)
|+.+.-+
T Consensus 163 gs~i~li 169 (438)
T COG2270 163 GSVILLI 169 (438)
T ss_pred cchHHHH
Confidence 4444433
No 195
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.80 E-value=1.8e-08 Score=97.66 Aligned_cols=155 Identities=15% Similarity=0.190 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
+.+..++..|...+.+ ---..+..+.+...+++.++..++.+.++.-..+.+.++||+.||.+|-|.--++-+.+..+|
T Consensus 45 ~lv~mc~lgfgsyfcy-d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~G 123 (459)
T KOG4686|consen 45 ALVFMCLLGFGSYFCY-DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLG 123 (459)
T ss_pred HHHHHHHhcccceeec-CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHH
Confidence 4444444444443333 222345566666777777788888899998889999999999999999877666666667777
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.++.+.- +++ +..+++..+|++.|+|.-........+..-+|..++ ...
T Consensus 124 qliFa~G--------------gi~-----------~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~ 172 (459)
T KOG4686|consen 124 QLIFAAG--------------GIS-----------HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNF 172 (459)
T ss_pred HHHHHhc--------------hHH-----------HHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccc
Confidence 7776542 111 467889999999999987777888999999999999 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhcc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~ 256 (540)
.+++......+|...-..+.+++.+..
T Consensus 173 vfGlqlSvAR~GstvNf~lm~~ly~~~ 199 (459)
T KOG4686|consen 173 VFGLQLSVARLGSTVNFLLMPFLYDTM 199 (459)
T ss_pred hhhHHHHHHHhhceeeeeecHHHHHHH
Confidence 999987777788776666667776543
No 196
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.79 E-value=1.4e-07 Score=97.68 Aligned_cols=145 Identities=10% Similarity=0.021 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHH-HHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFL-GISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
..+.+.+..++..+.++...++++.|+++ +|++..+.+.+..... ++..++.+++|+++||+ |||+.+.++.++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 287 (356)
T TIGR00901 210 QALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQAL 287 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Confidence 45556666666778888888899999987 9999999887777655 57788999999999998 999999888887777
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
+..+..+..... . +.+ .+ ..+...+....++.+++.+...+...+++.|.+|++. |+
T Consensus 288 ~~~~~~~~~~~~--~----------~~~--~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g 344 (356)
T TIGR00901 288 TNAGFVWLASNG--H----------HDG--IT---FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GA 344 (356)
T ss_pred HHHHHHHHHhcC--c----------ccc--cc---cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cH
Confidence 655444321100 0 000 00 0123456667778899999999999999999999999 99
Q ss_pred hHHHHHHHHHh
Q 009195 229 RFFNFFYLSVT 239 (540)
Q Consensus 229 ~~~~~~~~~~~ 239 (540)
+.+++++...+
T Consensus 345 ~~~g~~~~~~~ 355 (356)
T TIGR00901 345 TQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHh
Confidence 99999776554
No 197
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.79 E-value=3e-07 Score=97.95 Aligned_cols=162 Identities=14% Similarity=0.104 Sum_probs=128.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
|....+++..++..++........+.|.+..+|.+ ...+.......++..++.+++++++||+ |+|+++.++.++..+
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 35666777777777777777777788888888887 4556677778888899999999999998 999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHL 227 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~R 227 (540)
+.+++.+... .+...+++..++.|++.++......++++|..+.++.+. +...
T Consensus 303 ~~~~~~~~~~--------------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~ 356 (428)
T PF13347_consen 303 GFLLLFFLGP--------------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRRE 356 (428)
T ss_pred HHHHHHHHHh--------------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCch
Confidence 8888777521 367788888899999999999999999999998543110 1115
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
+..++.+.+...++.++++.+.+.+.+..|+
T Consensus 357 g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 357 GMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 7777788889999999999998887665443
No 198
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.79 E-value=9.5e-07 Score=89.64 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=110.6
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccc
Q 009195 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQL 175 (540)
Q Consensus 96 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (540)
+-++.|++..+.+.+.....+...+..++.|.++||+ |||+..++..+++.+..+..-.
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~-------------------- 118 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS-------------------- 118 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc--------------------
Confidence 3467999999999888888888888889999999998 9999999999988887654322
Q ss_pred cCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC-chhhhhhhhHHHHHH-HHHhHHHHHHHHHHHHhh
Q 009195 176 LGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS-KDYKTHLDRFFNFFY-LSVTVGAIVAFTLVVYIQ 253 (540)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~-~~~~~~R~~~~~~~~-~~~~lg~~i~p~i~~~l~ 253 (540)
.+...++++|++.|++......+..+.+.....++. +++ ....-++... +...+-++++.+++.++.
T Consensus 119 ---------~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~~l~ 187 (354)
T PF05631_consen 119 ---------SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WLSDTFSLATFFGNGVVAIGAGVVANVLA 187 (354)
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HHHHHHHHHHHHHhHHHHHHHhHHHHHHH
Confidence 467889999999999999988887766533322222 211 1333333322 222334455555666666
Q ss_pred hccch--HHHHHHHHHHHHHHHHHHHHhccccccc
Q 009195 254 MEHGW--GSAFGALAIAMGISNMLFFIGTPLYRHR 286 (540)
Q Consensus 254 ~~~gw--~~~f~i~~i~~~~~~~~~~~~~~~~~~~ 286 (540)
+..+. ..+|...+++.+++.++....+++....
T Consensus 188 ~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~ 222 (354)
T PF05631_consen 188 DWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD 222 (354)
T ss_pred HHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC
Confidence 65554 7788888887777776666555554433
No 199
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.79 E-value=5.3e-07 Score=95.01 Aligned_cols=157 Identities=6% Similarity=-0.068 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 009195 83 MAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVF 162 (540)
Q Consensus 83 ~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~ 162 (540)
.........++.|+++.+|.+..+.+.......++..++.++.+++.||. ++++++..+..+ .+..+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~------ 290 (393)
T PRK11195 219 GAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ------ 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH------
Confidence 33344445567788889999999999999999999999999999999997 988887776533 2222222221
Q ss_pred CCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHH
Q 009195 163 MPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGA 242 (540)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~ 242 (540)
.+.....+..++.|++.+...+...+.+.+..|++. ++++.+++.++..++|.
T Consensus 291 ----------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~ 343 (393)
T PRK11195 291 ----------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAM 343 (393)
T ss_pred ----------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHH
Confidence 234445566678899988877777788777644432 16889999999999999
Q ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 243 IVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 243 ~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
.++..+.+.+ ...|-++.+.+..+..++.+.+
T Consensus 344 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 344 LLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 9999888865 5567666666555544444433
No 200
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.76 E-value=6.8e-07 Score=90.20 Aligned_cols=170 Identities=15% Similarity=0.127 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..|.+.+..-++++.+|.+..++|.++. +.|+|..+++..++...+......++.-.+++|.--+|+........+.+|
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 5677777788899999999999999886 679999999999999999999999999999998767899999999999999
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+.+.+. |. +...+. .+++|+|.|+..+....++.+-.++.+. -++
T Consensus 288 ~~G~~~~-------P~--------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~ 333 (395)
T COG2807 288 LVGLLLA-------PG--------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAA 333 (395)
T ss_pred HHHHHHh-------hh--------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHH-----HHH
Confidence 9888765 21 222222 4899999999999999999988765441 444
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNM 274 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~ 274 (540)
..++-+-...+-+.+||.+.|++.|.+| |+..+...+...++..+
T Consensus 334 LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 334 LSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred HHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHH
Confidence 4455555566668889999999999876 88777665555444333
No 201
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.73 E-value=1.4e-06 Score=90.52 Aligned_cols=147 Identities=10% Similarity=-0.093 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
+...+..++...+.+....+.+.++.+.+|++..+.+.......++..++.+++|+++||+ |||+++.++.++..+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~ 275 (377)
T PRK11102 197 LGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGI 275 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Confidence 3333444444455555566667788888999999999999999999999999999999998 999999988876544333
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
.+..... .+ .+...+.++..+.+.+.+...+.....+.|..| +. |++..
T Consensus 276 ~~~~~~~----~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~ 324 (377)
T PRK11102 276 WLVVSAL----LD--------------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTAS 324 (377)
T ss_pred HHHHHHH----Hh--------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHH
Confidence 2222110 00 123333344444444455555555666777766 55 77777
Q ss_pred HHHHHH-HhHHHHHHHHHHH
Q 009195 232 NFFYLS-VTVGAIVAFTLVV 250 (540)
Q Consensus 232 ~~~~~~-~~lg~~i~p~i~~ 250 (540)
++++.. ..+|+.+++.++.
T Consensus 325 ~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 775443 3466666666543
No 202
>PRK11043 putative transporter; Provisional
Probab=98.71 E-value=2.1e-06 Score=90.30 Aligned_cols=148 Identities=11% Similarity=-0.004 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhcc
Q 009195 81 ERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMK 160 (540)
Q Consensus 81 ~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~ 160 (540)
....++....+.+.|++ ++|++..+.++......++..++.++++++.||+ |||+.+....++..++.+.+......
T Consensus 215 ~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (401)
T PRK11043 215 CSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLL- 291 (401)
T ss_pred HHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 33444555566677775 5799999999887777888889999999999997 99988766655555544333222110
Q ss_pred ccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhH
Q 009195 161 VFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTV 240 (540)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~l 240 (540)
.. .+...++++..+.|++.+...+.......|.+| +. |+++.++++.....
T Consensus 292 ---~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~ 342 (401)
T PRK11043 292 ---SH-------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLG 342 (401)
T ss_pred ---cc-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHH
Confidence 00 123344455667788888888888887778776 45 89999998887777
Q ss_pred HHHHHHHHHHHhhhccchHH
Q 009195 241 GAIVAFTLVVYIQMEHGWGS 260 (540)
Q Consensus 241 g~~i~p~i~~~l~~~~gw~~ 260 (540)
++.+++.+.+.+.+......
T Consensus 343 ~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 343 LCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHccCCChhHH
Confidence 88888888888876443433
No 203
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.71 E-value=9e-06 Score=86.80 Aligned_cols=162 Identities=15% Similarity=0.056 Sum_probs=116.8
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc--cc--hHHHHHHHHHHHHHHHHHHHHhhhccccCCCCC
Q 009195 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY--LG--RYWTIAIFTTIYLAGLTGITLCATMKVFMPNQD 167 (540)
Q Consensus 92 ~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~--~G--R~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~ 167 (540)
...|+++++|+++++.....++..+-..+- ++.|.++|-+ +| ||+-++++.++..++.+.++.. +.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~-------~~-- 81 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL-------PA-- 81 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc-------cc--
Confidence 456789999999999887777666655554 6789999986 35 5555566666665555554442 11
Q ss_pred cccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 009195 168 NCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (540)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~ 247 (540)
...+.....+..++..+|........-++..|....+... |+...++.+....+|++++..
T Consensus 82 ---------------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~ 142 (433)
T PF03092_consen 82 ---------------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSL 142 (433)
T ss_pred ---------------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHH
Confidence 0023344555667788888888889999999998654422 788888888899999999999
Q ss_pred HHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 248 LVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 248 i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
++|++.+..+++..|.+.+++..+..+..++..++
T Consensus 143 l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 143 LSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999988877766665555554443
No 204
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.71 E-value=1.6e-07 Score=96.13 Aligned_cols=142 Identities=19% Similarity=0.240 Sum_probs=115.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-hHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKS-FADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLT 151 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~ 151 (540)
......++..+.++....+++.|+.+.+|++ ..+.+...+...++..++.++.|+++||+ |+++...+......++.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 288 (352)
T PF07690_consen 210 ILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGAL 288 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHH
Confidence 3444445555566667788888989999999 78999999999999999999999999997 988888877777666666
Q ss_pred HHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHH
Q 009195 152 GITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFF 231 (540)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~ 231 (540)
.+.+.... .+....++..++.|++.+...+....++.|.+|++. |++..
T Consensus 289 ~~~~~~~~-------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 337 (352)
T PF07690_consen 289 GLLLLPFS-------------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAF 337 (352)
T ss_dssp HHCCSHHH-------------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHH
T ss_pred HHHHHHHh-------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHH
Confidence 55543210 234556667788999999999999999999999988 99999
Q ss_pred HHHHHHHhHHHHHHH
Q 009195 232 NFFYLSVTVGAIVAF 246 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p 246 (540)
++++...++|+.+||
T Consensus 338 g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 338 GLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCC
Confidence 999999999999887
No 205
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.8e-07 Score=101.34 Aligned_cols=175 Identities=14% Similarity=0.099 Sum_probs=144.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccch--HHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR--YWTIAIFTTIY 146 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR--~~~i~i~~~l~ 146 (540)
+..+...+...+..++++.-..+++.|.+ ..+++..+++..+++..+...++.++.|+++|+. .. +.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 46777888888888888888888888888 8999999999999999999999999999999986 63 33444444444
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.+.++++ .+...++..-.+.|+..|...+..+..+.|..+.+.
T Consensus 376 gl~~~~~p~~----------------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------ 421 (509)
T KOG2504|consen 376 GLARLFLPFA----------------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------ 421 (509)
T ss_pred HHHHHHHHHh----------------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------
Confidence 4444444443 356677777789999999999988899999999888
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccc-hHHHHHHHHHHHHHHHHHHHHh
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG-WGSAFGALAIAMGISNMLFFIG 279 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g-w~~~f~i~~i~~~~~~~~~~~~ 279 (540)
-..++++..+...++..+||.+++++.+.+| |...|+...+..+++.+..++.
T Consensus 422 l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~ 475 (509)
T KOG2504|consen 422 LSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLIL 475 (509)
T ss_pred cchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHh
Confidence 8999999999999999999999999999888 9999998888877776655543
No 206
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.67 E-value=1.5e-06 Score=93.95 Aligned_cols=165 Identities=12% Similarity=-0.016 Sum_probs=114.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
|.++.+++..++..+..+......+.|.+..++ +....+.+.....++..++.++.++++||+ |+|++++++.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556667777777777776666665544444444 455556666666678888899999999998 999999988887776
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCch-hhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKD-YKTHL 227 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~-~~~~R 227 (540)
+.+.+.+... .+. .+...+++..++.|++.+...+...++++|..+.++-+ .+...
T Consensus 309 ~~~~~~~~~~----~~~-------------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~ 365 (473)
T PRK10429 309 SCGVLLLMGL----AAP-------------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE 365 (473)
T ss_pred HHHHHHHHhc----cCc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch
Confidence 6655543211 011 34455666667888999998899999999997733210 00013
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
+..+++..+...+|..+++.+.+++.+..|+
T Consensus 366 G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 366 SIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4466778888899999999999988765554
No 207
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.66 E-value=2.3e-06 Score=89.79 Aligned_cols=69 Identities=13% Similarity=0.060 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 87 ~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
....+.+.|+++++|++..+.+.......++..++.++.|+++||+ |||+.+.++..+..++.+.+.+.
T Consensus 221 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 221 TFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556778888999999999888888999999999999999997 99999999988888877776654
No 208
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.64 E-value=1.4e-06 Score=92.38 Aligned_cols=164 Identities=9% Similarity=-0.043 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.+..++..++......++.++++.|+.+. .+.+...++...+.+..+..++.+++|+++||+ ++|+++.++.++.++.
T Consensus 234 ~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~ 312 (410)
T TIGR00885 234 YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMAL 312 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 34445555555555556778888998653 245555556667777788899999999999998 9999988888777776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.++.... .+. ...+..++.|++.+.++|.+.+...+..+++. +..
T Consensus 313 ~ll~~~~----------------------------~~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~ 357 (410)
T TIGR00885 313 CLGSIFA----------------------------GGH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYG 357 (410)
T ss_pred HHHHHHc----------------------------CCh-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhh
Confidence 6665553 111 22456677888888888999999999998655 322
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhcc------chHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEH------GWGSAFGALAIAMGIS 272 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~------gw~~~f~i~~i~~~~~ 272 (540)
...+ ..+ .+|+.+.|.+.|++.|.. +.+..|.++.++.+..
T Consensus 358 s~~l-~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 358 AAGL-VMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHHH-HHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHHH
Confidence 2222 223 399999999999999954 4778888776665443
No 209
>PRK09669 putative symporter YagG; Provisional
Probab=98.64 E-value=9.8e-07 Score=94.46 Aligned_cols=160 Identities=12% Similarity=0.053 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
.+.++...++...+........+.|.+..++. ....+.......+...++.+++++++||+ |+|+.+.++.++..+..
T Consensus 231 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~ 308 (444)
T PRK09669 231 WRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILS 308 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 33344444444344432223333333333333 33334455556677778888999999997 99999988876655443
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh-hhhhhh
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY-KTHLDR 229 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~-~~~R~~ 229 (540)
+...+. +. .+...+++..++.|++.++..+...++++|..+.++.+. +...+.
T Consensus 309 ~~~~~~-------~~-------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~ 362 (444)
T PRK09669 309 ALIFFI-------PP-------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGL 362 (444)
T ss_pred HHHHHh-------Cc-------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchH
Confidence 332221 11 345566777788999999999999999999987433110 011355
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
.++.+.+...+|.++|+.+++++.+..|+
T Consensus 363 ~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 363 VFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 67778889999999999999988776665
No 210
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.58 E-value=1.7e-06 Score=92.68 Aligned_cols=180 Identities=16% Similarity=0.184 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR----YWTIAIFTT 144 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR----~~~i~i~~~ 144 (540)
+.+|.+.+..++.+.+++.+..++|.|+.+.+|++..+.++..++-.+.+.+..+++|.++||+..| +.+..+...
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 4789999999999999999999999999999999999999999999999999999999999997221 122222222
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccc-hhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKS-WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDY 223 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~ 223 (540)
+...+...+.+... +.+ |. +. .....+.++..+.|+..++..-+ ..|..| +.
T Consensus 338 i~~~~~ai~l~~l~---~~~----~~------------~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~ap-q~--- 390 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLA---FTS----DE------------HRLLAVILLTIAIGLSGFNISGFYKN----HQDIAP-QH--- 390 (466)
T ss_pred HHHHHHHHHHHeee---ecC----CC------------cchHHHHHHHHHHHHcccchhhhHhh----hhhccc-hH---
Confidence 22222222211110 111 10 00 11122222223333333333222 222233 23
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc---cchHHHHHHHHHHHHHHHHHHHH
Q 009195 224 KTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME---HGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 224 ~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~---~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
-+..+++.+...++.+.++|.+.+.+..+ ..|++.|.+.+++.+++.+++.+
T Consensus 391 ---a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 391 ---AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence 67888888999999999999999998842 36999999999988887766544
No 211
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.55 E-value=7.3e-07 Score=92.22 Aligned_cols=139 Identities=11% Similarity=-0.000 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 71 ALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGL 150 (540)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~ 150 (540)
.+...+..++.....+.+..+.+.|+++.+|++..+++...+...+...++.+++|+++||+ |||+.+..+..+..++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 305 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMGA 305 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHHH
Confidence 34444445555556667778889999999999999999889989999999999999999998 99988877776666655
Q ss_pred HHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhH
Q 009195 151 TGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRF 230 (540)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~ 230 (540)
.++.+... +. .+...+++..++.+++.|...+...++.+|.+| ++ +++.
T Consensus 306 ~~~~~~~~-----~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~ 354 (366)
T TIGR00886 306 FLVVLGLV-----SP-------------------LSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAV 354 (366)
T ss_pred HHHHhcCC-----Cc-------------------chHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccH
Confidence 55543211 00 034444445555566666666667777888887 35 8888
Q ss_pred HHHHHHHHhHH
Q 009195 231 FNFFYLSVTVG 241 (540)
Q Consensus 231 ~~~~~~~~~lg 241 (540)
.++.+...++|
T Consensus 355 ~g~~~~~~~~g 365 (366)
T TIGR00886 355 SGLVGAIGNLG 365 (366)
T ss_pred HHHHHHhccCC
Confidence 88877766665
No 212
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.55 E-value=9.7e-09 Score=111.98 Aligned_cols=205 Identities=14% Similarity=0.080 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 009195 74 IFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGI 153 (540)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~ 153 (540)
+++..+.+ +..++......+-+.+.++++.++++++.+.+-++..+..++..++++|- -|-|.+-++.++..+|.+++
T Consensus 8 ~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~ 85 (539)
T PF03137_consen 8 LCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLF 85 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHH
Confidence 34444445 55556666667788999999999999999999999999999999999985 67777888899999999988
Q ss_pred HHhhhccccCC-C------------CCcc----ccccc-ccCCCC----CccchhHHHHHHHHHHHHHhhcccchhhhhh
Q 009195 154 TLCATMKVFMP-N------------QDNC----DRISQ-LLGSCE----PAKSWQMLYLYTVLYITGFGAAGIRPCVSSF 211 (540)
Q Consensus 154 ~~~~~~~~~~~-~------------~~~~----~~~~~-~~~~~~----~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~ 211 (540)
++.-....-.. . ...| +.... ....|. .....-...++++.++.|+|....++...+|
T Consensus 86 ~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tY 165 (539)
T PF03137_consen 86 ALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITY 165 (539)
T ss_dssp ------------------------------------------------------------------SSS-----------
T ss_pred hccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeee
Confidence 87532211100 0 0011 00000 000111 1111124567788999999999999999999
Q ss_pred hhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh---------------------ccc-hHHHHHHHHHHH
Q 009195 212 GADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM---------------------EHG-WGSAFGALAIAM 269 (540)
Q Consensus 212 ~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~---------------------~~g-w~~~f~i~~i~~ 269 (540)
+=|-.+++. -...+++++....+|+++|.++++.+.+ ..| |+.+|.+.+++.
T Consensus 166 iDDnv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~ 239 (539)
T PF03137_consen 166 IDDNVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILL 239 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecccccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 999999888 7788889889999999999888876532 123 888888777776
Q ss_pred HHHHHHHHHhccccccc
Q 009195 270 GISNMLFFIGTPLYRHR 286 (540)
Q Consensus 270 ~~~~~~~~~~~~~~~~~ 286 (540)
++..+.+++..|+++..
T Consensus 240 ~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 240 FLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp -----------------
T ss_pred HHHHHHHHcCCccCCCc
Confidence 66666665555544433
No 213
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.51 E-value=1.3e-05 Score=84.22 Aligned_cols=139 Identities=12% Similarity=-0.059 Sum_probs=96.3
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCc
Q 009195 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDN 168 (540)
Q Consensus 89 ~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~ 168 (540)
....+.|+++.+|.+..+.++.......+..++.++.+++.||+ ||+.... .....++.+....... ...
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~--~~~~~~~~~~~~~~~~----~~~--- 296 (394)
T PRK11652 227 EACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQS--VICCLLAGLLMWIPGW----FGV--- 296 (394)
T ss_pred HHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHH----hcc---
Confidence 34456688888999999988888888888888888889999987 7433322 2222222222211100 000
Q ss_pred ccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHH
Q 009195 169 CDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTL 248 (540)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i 248 (540)
.+...++.+.++.|++.+...+....+..|.+| +. +++..++.+...++|+.+++.+
T Consensus 297 ----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~lg~~~~~~~ 353 (394)
T PRK11652 297 ----------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YL------AGTAGALLGGLQNIGSGLAALL 353 (394)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cc------chHHHHHHHHHHHHHHHHHHHH
Confidence 234456667788899999888999999999887 35 7888888888889999999999
Q ss_pred HHHhhhccchHH
Q 009195 249 VVYIQMEHGWGS 260 (540)
Q Consensus 249 ~~~l~~~~gw~~ 260 (540)
++++.....+..
T Consensus 354 ~~~~~~~~~~~~ 365 (394)
T PRK11652 354 SAMLPQTGQFSL 365 (394)
T ss_pred HHHccCCchHHH
Confidence 988866544443
No 214
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.51 E-value=1.4e-05 Score=84.24 Aligned_cols=176 Identities=8% Similarity=0.009 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
..++..++.....-....+...|+++.-|.+....+...++..+.-.+.-.+.+++-.|+ |-+++++++.+.+++=+.+
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l 289 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLL 289 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHH
Confidence 333444455555545567778898765557777777666666777777777889999997 9999999999998887666
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFN 232 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~ 232 (540)
++.... |. .......+.+..+.|+..+........++.+.+|++. |+++-+
T Consensus 290 ~a~~~~-----~~------------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~ 340 (400)
T PF03825_consen 290 YAYFSD-----PW------------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQG 340 (400)
T ss_pred HHHhcC-----Cc------------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHH
Confidence 665411 00 0011222334567999999999999999999999999 999999
Q ss_pred HHHHH-HhHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHHHHHH
Q 009195 233 FFYLS-VTVGAIVAFTLVVYIQMEHGWG------SAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 233 ~~~~~-~~lg~~i~p~i~~~l~~~~gw~------~~f~i~~i~~~~~~~~~~~ 278 (540)
+++.. ..+|..+|..++|++.+++|-+ ..+.+.++..++..+++.+
T Consensus 341 l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 341 LYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 97664 5799999999999999987643 3444455544444444444
No 215
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.49 E-value=5.7e-06 Score=89.51 Aligned_cols=184 Identities=11% Similarity=0.093 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHH----HHHHHHHHHHHHHHHHhHHH----HHhhhccchHHHH--
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFAD----SSNAVNNFLGISQASSVLGG----FLADAYLGRYWTI-- 139 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~----~~~~~~~~~~~~~~~~~~~G----~lsD~~~GR~~~i-- 139 (540)
.++.+++..++..+.+....+.++.|..+..+.+... .++..+...+...+..++.. ++.+|-.+.+...
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 4455555555666666666777788877765543211 44555555555555555544 4555421333333
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 009195 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (540)
Q Consensus 140 ~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (540)
.+++++..++.+.+++..... . .+...+.+++.+..++.++|.....|...++.++..|++
T Consensus 353 ~~G~~l~~~~~~~~~~~~~~~---~----------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~ 413 (475)
T TIGR00924 353 TLGMLFCGASFLTFAASIWFA---D----------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQR 413 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhc---C----------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHH
Confidence 677888877777766542110 0 011146788888999999999999999999999999998
Q ss_pred CchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 220 SKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 220 ~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
. |++.++++.+...+|..+++.+.....+..+|...|....+..++..++++.
T Consensus 414 ~------~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 414 L------MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 8 9999999999999999999998887777777887777666655555444444
No 216
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.48 E-value=1.1e-05 Score=84.46 Aligned_cols=177 Identities=8% Similarity=0.069 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMH---KSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
..|...+........++..-...+.|.+..++ .++...+...+.-.+.-.+.-.+..++-+|+ |-|+.++++.++.
T Consensus 221 ~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i~ 299 (412)
T PF01306_consen 221 NFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHHH
Confidence 45554444444333444333345677776544 2344456777777777777778889999998 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
++=.++++++ .+...+.+.+.+.|+-.+.......-|+++.+|++.
T Consensus 300 ~iRi~~~~~~----------------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------ 345 (412)
T PF01306_consen 300 AIRIIGSGFA----------------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------ 345 (412)
T ss_dssp HHHHHHHHT------------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------
T ss_pred HHHHHHHhhh----------------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------
Confidence 9988888876 467788899999999999999999999999999887
Q ss_pred hhhHHHH-HHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 227 LDRFFNF-FYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 227 R~~~~~~-~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
.++...+ ++++..+|..+.+.++|++.++.|++..|++.+.++++..++..+..+
T Consensus 346 sAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 346 SATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 7788877 678889999999999999999999999898777766655555555433
No 217
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.48 E-value=5.1e-05 Score=81.20 Aligned_cols=159 Identities=15% Similarity=0.116 Sum_probs=115.0
Q ss_pred HHHHHHHHHHhhCCChHHH-HHHHHH----HHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 009195 89 SVNMVTFMFYVMHKSFADS-SNAVNN----FLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFM 163 (540)
Q Consensus 89 ~~~~~~yl~~~lg~~~~~~-~~~~~~----~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~ 163 (540)
..+...+.....+.+.... ...... ..+...+..++.|.++||+ |||..+.+..+...+..+...+.
T Consensus 41 ~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~------- 112 (463)
T KOG2816|consen 41 MTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQ------- 112 (463)
T ss_pred hhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHH-------
Confidence 3555556655555443222 222222 2456677788999999998 99999999988877776666553
Q ss_pred CCCCcccccccccCCCCCccchhHHHHHHHHHHHHH--hhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHH
Q 009195 164 PNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGF--GAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVG 241 (540)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~--g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg 241 (540)
. +++++ +.++ +.+.+.+...++++|....+. |...+++.+-....+
T Consensus 113 ----------------------~-~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~~~ 160 (463)
T KOG2816|consen 113 ----------------------G-YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFGAG 160 (463)
T ss_pred ----------------------H-HHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHHHH
Confidence 1 22222 3333 234566788899999999887 999999988888889
Q ss_pred HHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhcccccccC
Q 009195 242 AIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHRL 287 (540)
Q Consensus 242 ~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~~ 287 (540)
..++|.+++++.+..|....|.+.++..++..+...+..++..+++
T Consensus 161 ~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 161 LVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred HhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 9999999999999999999999999988888777776666654443
No 218
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.46 E-value=1.7e-05 Score=77.77 Aligned_cols=182 Identities=10% Similarity=0.066 Sum_probs=114.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
||...........+.. ..|... .....+++.+|++.++...+.....+|..+| ++.|.+.|++ |.+.++.++.+..
T Consensus 1 rW~~l~a~~~v~~~~G-t~Y~Fs-~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~-gp~~~l~iG~~~~ 76 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSG-TTYTFS-AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRF-GPWVVLLIGAVLG 76 (250)
T ss_pred ChhhHHHHHHHHHhcC-cccchh-hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhc-chHHHHHHHHHHH
Confidence 4544444444444332 223333 3366899999999999999999999999886 7889999997 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.+|+.++.++... ..+. ...+.+.+..++.|.+.+.+....-....+.||. +
T Consensus 77 ~~GY~~~~l~~~~--~i~~-------------------~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------ 128 (250)
T PF06813_consen 77 FVGYGLLWLAVSG--RIPS-------------------LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------ 128 (250)
T ss_pred HHHHHHHHHHHhC--ccCc-------------------cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------
Confidence 9999988876331 1110 2345566666666666555555555556688984 6
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhc
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~ 280 (540)
||+..++.--...+++.+-..+...+...-.-...+.+.....++.++..++.+
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 899988855555555544433333333322222233333333444444444433
No 219
>PRK11462 putative transporter; Provisional
Probab=98.38 E-value=4.6e-05 Score=82.10 Aligned_cols=157 Identities=10% Similarity=0.024 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 73 FIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTG 152 (540)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~ 152 (540)
.++...++..+...........|.+..+|.+ ...+.+...+.++..++.+++++++||+ |+|+++..+.++..+..++
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~ 309 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLA 309 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHH
Confidence 3333444444444333333344444444443 3345566777788888999999999997 9998876555444443333
Q ss_pred HHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh--hH
Q 009195 153 ITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD--RF 230 (540)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~--~~ 230 (540)
..+. +. .+...+++..++.|++.+...+...++++|..+-++-+ ...|. ..
T Consensus 310 ~~~~-------~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~-tG~r~~g~~ 362 (460)
T PRK11462 310 MFFV-------PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWC-NGKRLTGIS 362 (460)
T ss_pred HHHh-------ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHh-cCCCchHHH
Confidence 2221 11 22333444556678877777777778888887733210 11133 33
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhhhccch
Q 009195 231 FNFFYLSVTVGAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 231 ~~~~~~~~~lg~~i~p~i~~~l~~~~gw 258 (540)
++.+.+...+|..+++.+++++.+..|+
T Consensus 363 ~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 363 FAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4556677888888888888877654444
No 220
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.36 E-value=2.8e-05 Score=76.33 Aligned_cols=142 Identities=21% Similarity=0.268 Sum_probs=105.9
Q ss_pred HHHHhhCCCh--HHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccc
Q 009195 95 FMFYVMHKSF--ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (540)
Q Consensus 95 yl~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 172 (540)
.....++.+. ...++..+.+.++..++.++.|.++||+ |||+.+..+.....++.+.+.+...
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-------------- 91 (338)
T COG0477 27 LLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-------------- 91 (338)
T ss_pred HHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--------------
Confidence 3344555554 4788889999999999999999999998 9998888887765555444444310
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC-CCchhhhhhhhHHHHHHH-HHhHHHHHHHHHHH
Q 009195 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE-RSKDYKTHLDRFFNFFYL-SVTVGAIVAFTLVV 250 (540)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~-~~~~~~~~R~~~~~~~~~-~~~lg~~i~p~i~~ 250 (540)
.....+.+.|++.|++.+...+...++++|.+|. .. |+...++... ...+|..++|.+++
T Consensus 92 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T COG0477 92 ------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAG 153 (338)
T ss_pred ------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2467788888889999999999999999999997 34 8888888766 57788888887776
Q ss_pred Hhhhc--cchHHHHHHHHHHH
Q 009195 251 YIQME--HGWGSAFGALAIAM 269 (540)
Q Consensus 251 ~l~~~--~gw~~~f~i~~i~~ 269 (540)
.+... .+|++.|.+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 154 LLLGALLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHH
Confidence 66544 56888555544433
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.30 E-value=6.9e-05 Score=76.37 Aligned_cols=85 Identities=9% Similarity=0.037 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc---------
Q 009195 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME--------- 255 (540)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~--------- 255 (540)
.+...++++.++.|.|.+..++...+++++..++++ +.+.+++.+....+|..++|++++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 467889999999999999999999999999999888 89999999999999999999999987632
Q ss_pred -------cchHHHHHHHHHHHHHHHHH
Q 009195 256 -------HGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 256 -------~gw~~~f~i~~i~~~~~~~~ 275 (540)
..|+++|++.+++.++..++
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i~ 108 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAII 108 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35888888655554443333
No 222
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.29 E-value=1.7e-05 Score=83.90 Aligned_cols=160 Identities=14% Similarity=0.051 Sum_probs=120.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.....++..++...++....+.++.|.+..+|.+.....+.......+..++.++..++++|+ |+|+++.++.++.+++
T Consensus 237 p~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~ 315 (467)
T COG2211 237 PLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVG 315 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 344445566666666666666667778888899888888888888888888899999999997 9999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++.+.. . .+..++++..++.++|.+...+...++++|..+-.+-+ ...|..
T Consensus 316 ~~~~~f~~-------~-------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~-TG~R~e 368 (467)
T COG2211 316 YLLLYFTP-------A-------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWK-TGVRRE 368 (467)
T ss_pred HHHHHhhc-------C-------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHH-hCCCch
Confidence 99888762 1 46778888889999999999999999999988743311 111333
Q ss_pred --HHHHHHHHHhHHHHHHHHHHHHhhhccc
Q 009195 230 --FFNFFYLSVTVGAIVAFTLVVYIQMEHG 257 (540)
Q Consensus 230 --~~~~~~~~~~lg~~i~p~i~~~l~~~~g 257 (540)
.++.+.+..=+|.+++..+.+++....|
T Consensus 369 Gi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 369 GIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3344555666777777777776654433
No 223
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.24 E-value=8e-05 Score=77.00 Aligned_cols=167 Identities=16% Similarity=0.133 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhh
Q 009195 79 MAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCAT 158 (540)
Q Consensus 79 ~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~ 158 (540)
++..++++.-=..+-+|--+.||++..+.......+..+..++-.+.|++..|-.|.+++..+++.+..++..+..++..
T Consensus 218 ~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 218 FLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred HHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444444333445678888999999999999999999999999999998885558888888898888888777776643
Q ss_pred ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHH
Q 009195 159 MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSV 238 (540)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~ 238 (540)
. .+.+.+..+.+++|++.|.+.....+.+-|+..+.. -+.+++.+..+.
T Consensus 298 ~-------------------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQ 346 (403)
T PF03209_consen 298 L-------------------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQ 346 (403)
T ss_pred c-------------------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHH
Confidence 1 356788899999999999998888888889998777 789999999998
Q ss_pred hHHHHHHHHHHHHhhhc----------cchHHHHHHHHHHHHHHHHHH
Q 009195 239 TVGAIVAFTLVVYIQME----------HGWGSAFGALAIAMGISNMLF 276 (540)
Q Consensus 239 ~lg~~i~p~i~~~l~~~----------~gw~~~f~i~~i~~~~~~~~~ 276 (540)
.+..+++.++++.+.|. .+|..+|.+-++..++++++.
T Consensus 347 A~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 347 AIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888776542 247777777777766665554
No 224
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.19 E-value=4.4e-05 Score=82.86 Aligned_cols=175 Identities=7% Similarity=0.039 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCh----HHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHH-------HHHHHHHH
Q 009195 78 EMAERMAYFGLSVNMVTFMFYVMHKSF----ADSSNAVNNFLGISQASSVLGGFLADAYLGRYWT-------IAIFTTIY 146 (540)
Q Consensus 78 ~~~~~~~~~~~~~~~~~yl~~~lg~~~----~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~-------i~i~~~l~ 146 (540)
..+....+......++.|+++..+.+. -...+..+...+...+..++.|++.||+ |||+. +.++.++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 444455555555667777765333211 1223444445555667777889999998 98873 66777777
Q ss_pred HHHHHHHHHhhh-ccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 147 LAGLTGITLCAT-MKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 147 ~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
.++.+.++.... ...... ..+.+.+....++.|+|.+...+....++.+..|++.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~-------------------~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~----- 412 (489)
T PRK10207 357 SLGFLTAAAAGMWFADAQG-------------------LTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL----- 412 (489)
T ss_pred HHHHHHHHHHHHhhcCCCC-------------------ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH-----
Confidence 766654432210 000000 0245566677789999999999999999999999988
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhhh----------ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 226 HLDRFFNFFYLSVTVGAIVAFTLVVYIQM----------EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~p~i~~~l~~----------~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
++.+++++++..++|..++..++.+... ...+.+.|...++..++..++++.
T Consensus 413 -~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 413 -MGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998877765521 112455565555544444444433
No 225
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.18 E-value=8.4e-05 Score=80.94 Aligned_cols=142 Identities=13% Similarity=0.062 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHHHhHH----HHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCc
Q 009195 107 SSNAVNNFLGISQASSVLG----GFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA 182 (540)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~----G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (540)
..+..++..+...+..++. +++.||+ +..+.+.++.++..++++.+.....+.. .+
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l~~l~f~~l~~~~~~~~------~~------------- 377 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVLCSGAFLVLPLGAKFAN------DA------------- 377 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHHHHHHHHHHHHHHHhcC------CC-------------
Confidence 3444455554445555555 5566665 6678888999999998888776532100 00
Q ss_pred cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh--------
Q 009195 183 KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-------- 254 (540)
Q Consensus 183 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~-------- 254 (540)
..-+..++.+..++.|+|.+...|...+++.+..|++. |++.++.++++..+|+.++..+......
T Consensus 378 ~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~ 451 (500)
T PRK09584 378 GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPL 451 (500)
T ss_pred CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccch
Confidence 01245577888899999999999999999999999998 9999999988888887777666643321
Q ss_pred --ccchHHHHHHHHHHHHHHHH
Q 009195 255 --EHGWGSAFGALAIAMGISNM 274 (540)
Q Consensus 255 --~~gw~~~f~i~~i~~~~~~~ 274 (540)
..++.+.|...++..++..+
T Consensus 452 ~~~~~~~~~f~~~~~~~~~~a~ 473 (500)
T PRK09584 452 MSLEVYGRVFLQIGIATAVIAV 473 (500)
T ss_pred hhhhhHHHHHHHHHHHHHHHHH
Confidence 11356667665555443333
No 226
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.18 E-value=9.6e-05 Score=75.97 Aligned_cols=156 Identities=13% Similarity=0.071 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
......+..|+..-.--.+.++++.|+.+..|.+..+++..++.+..+.++|+.++.++-.|+ -..|.+.+..++.++-
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill 315 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHH
Confidence 344455555665555556778899999988999999999999999999999999999998887 8888877777655544
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+...+. ++.. -+.+.++.|+..+.+.|.+.+...+..|.+.+ +++
T Consensus 316 ~~~~~l~----------------------------~g~v-~~~~l~~ig~F~simfPTIfslal~~l~~~ts-----~~s 361 (422)
T COG0738 316 LLAVALI----------------------------GGVV-ALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-----VGS 361 (422)
T ss_pred HHHHHHh----------------------------cChH-HHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-----ccc
Confidence 4444443 2222 33456789999999999999999999995552 333
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFG 263 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~ 263 (540)
+. -....+|+++.|.+.|++.|..|-...+.
T Consensus 362 ~~---l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 362 GL---LVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred ee---eeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 22 12345899999999999999998776655
No 227
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.15 E-value=0.00025 Score=75.28 Aligned_cols=167 Identities=12% Similarity=0.045 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.++...+..++....++......|.++++.+|.+..+.++......++..++..+.+.+.++. ++++.+.....+..++
T Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~ig 297 (413)
T PRK15403 219 LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHHH
Confidence 455555555666666777777788899999999999999887777777777777777765444 3444443333444444
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+++..... ..+ .+....+++.++.++|.+...++.....- .+.+.+ +++
T Consensus 298 ~~l~~~~~~---~~~--------------------~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~~-----~G~ 347 (413)
T PRK15403 298 LALLIVGNL---LWP--------------------HVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNLP-----KGT 347 (413)
T ss_pred HHHHHHHHH---Hcc--------------------ccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCCC-----CcH
Confidence 444433210 001 22333456777888888888777774332 222211 566
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
..++++.....+..+++.+.+++..+ +-.++|.+..++
T Consensus 348 a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 348 VSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 66777777777777888888888665 445555544443
No 228
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.03 E-value=0.00031 Score=75.58 Aligned_cols=208 Identities=14% Similarity=-0.032 Sum_probs=139.2
Q ss_pred cccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCh------HH----HHHHHHHHHHHHHHHHhHHHHHhh
Q 009195 62 LSKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFY-VMHKSF------AD----SSNAVNNFLGISQASSVLGGFLAD 130 (540)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~-~lg~~~------~~----~~~~~~~~~~~~~~~~~~~G~lsD 130 (540)
...++.++.++.++..+++.-++++.+..+.+.|+.+ .++-++ .+ ..+....+.+...+.+++--++.+
T Consensus 251 ~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~ 330 (477)
T TIGR01301 251 GAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCR 330 (477)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778899999999999999999999999999875 454322 11 224444455555566666778888
Q ss_pred hccc-hHHHHHHHHHHHHHHHHHHHHhhhccc-cCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhh
Q 009195 131 AYLG-RYWTIAIFTTIYLAGLTGITLCATMKV-FMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCV 208 (540)
Q Consensus 131 ~~~G-R~~~i~i~~~l~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~ 208 (540)
++ | ||++..++.++..++++...+...... ..+. +.+++. - .|........++...+.|+..+.....-
T Consensus 331 ~~-g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~~--~-~~~~~~~~~~l~~~~~~Gi~~A~~~siP 401 (477)
T TIGR01301 331 GW-GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYY-----DGDGES--L-PPPTGIKASALIVFAILGIPLAITYSIP 401 (477)
T ss_pred Hh-ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccc-----cccccc--c-CcchhhHHHHHHHHHHhhHHHHHHHHHh
Confidence 87 8 577778998888888777765422000 0000 000000 0 0001123555666678999999999999
Q ss_pred hhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc--hHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 209 SSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 209 ~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g--w~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
.+++++..+++..+ .|..+++++..+.+...+..+..+.+.+..| -.+.+.+.++.++++.++.+...|+
T Consensus 402 fal~s~~~~~~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 402 FALASIRSSNLGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHHHHHHccccCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999854411 6899999999999998888887777655444 4557777777777777766665443
No 229
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.03 E-value=1.2e-05 Score=82.06 Aligned_cols=173 Identities=14% Similarity=0.008 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccc--hHHHHHHHHHHHHHH
Q 009195 72 LFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG--RYWTIAIFTTIYLAG 149 (540)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~G--R~~~i~i~~~l~~i~ 149 (540)
+...+.-...+.+.-..-+.++.++.+.+..+..+.+++..-..+.+.++..+.|.++||+ + |......+.+.....
T Consensus 273 ~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~~ 351 (464)
T KOG3764|consen 273 LLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGVS 351 (464)
T ss_pred hhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHHH
Confidence 3333333333344433455677888888886666888888888889999999999999998 9 644444554444433
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
..+..++ +++..+++-++..+++.+...+.....+..+.+.+...+-..-|+
T Consensus 352 ~~~iP~~----------------------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGs 403 (464)
T KOG3764|consen 352 SGPIPFA----------------------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGS 403 (464)
T ss_pred hchhHhh----------------------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeee
Confidence 3333333 456777777778888888777777777777776555321113577
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHH
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISN 273 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~ 273 (540)
..++...+..+|..+||.+++.+.+..|++|.-.+.++..++-.
T Consensus 404 VyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iya 447 (464)
T KOG3764|consen 404 VYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYA 447 (464)
T ss_pred HHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999987766655544433
No 230
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.96 E-value=5.6e-08 Score=103.95 Aligned_cols=189 Identities=14% Similarity=0.072 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
.....+....+..+..+....+...++.+..+.+.. ........+...++.+++.++.||+ |||++++++.++..+.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444444444433334444556666777665 2222233344556667778999997 9999999998877776
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhc-ccchhhhhhhhccCCCCCchhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAA-GIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
.+.+..... ..++ +. ...+...+ +...+..++.+ +..+....+.+|.||++. |.
T Consensus 330 ~~~~~~~~~---~~~~--------------~~-~~~~~~~i-~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~ 384 (451)
T PF00083_consen 330 SLILGIIFF---LGVS--------------SS-SWWSILSI-VFLALFFAFFSLGWGPLPWIYTAELFPTKV------RS 384 (451)
T ss_pred ccccccccc---cccc--------------cc-cccccccc-eeeeeccccccccccccccccccccccccc------cc
Confidence 665541000 0010 00 00011111 11112222222 344556688899999999 99
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccccccc
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~~~ 286 (540)
++.++.+....+++.+++.+..++.+..+-...+.+.+++.++..+..++..|+.+.+
T Consensus 385 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 385 TGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK 442 (451)
T ss_pred cccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence 9999988888899988888888877766633445555555555555555545554443
No 231
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=0.00023 Score=77.77 Aligned_cols=198 Identities=13% Similarity=0.048 Sum_probs=103.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
+..++.....++..++..++-+....+....+.+..|.+... .+...+..+...++..++.++.||+ |||+.++.+.+
T Consensus 290 ~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~ 367 (513)
T KOG0254|consen 290 PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAA 367 (513)
T ss_pred cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHH
Confidence 345555555555555554444333333344445566765433 4444445555566667779999998 99999999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
...++.++++........... + ........+....+.......+..+....+.+|.+|.+.
T Consensus 368 ~m~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~---- 428 (513)
T KOG0254|consen 368 GMSICLVILAVVGVFALYYPN---S------------SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL---- 428 (513)
T ss_pred HHHHHHHHHHHHHHHhccCCC---c------------ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH----
Confidence 999998888876331111000 0 000111122222222333333334555578899999998
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-HHHHhcccccc
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNM-LFFIGTPLYRH 285 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~-~~~~~~~~~~~ 285 (540)
|+.+.++-.....+...+-......+.+..++...|.+......+..+ ..++..++.+.
T Consensus 429 --r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg 488 (513)
T KOG0254|consen 429 --RSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKG 488 (513)
T ss_pred --HhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCC
Confidence 888887743333222222212222222222234445544444444444 34444444443
No 232
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.93 E-value=5.8e-05 Score=79.92 Aligned_cols=160 Identities=9% Similarity=-0.063 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCC
Q 009195 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQ 166 (540)
Q Consensus 87 ~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~ 166 (540)
.+.+++=-++ ++++-.+..-+.....-..+-++.-++.++|-.|+ |+-+++.++++...+=++.+...
T Consensus 389 lv~tFLfWHl-ed~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L---------- 456 (618)
T KOG3762|consen 389 LVFTFLFWHL-EDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYL---------- 456 (618)
T ss_pred HHHHHHHHHH-hhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHh----------
Confidence 3444443334 45555555555555555666777778889999998 99999999998888866666554
Q ss_pred CcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHH-HhHHHHHH
Q 009195 167 DNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS-VTVGAIVA 245 (540)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~-~~lg~~i~ 245 (540)
.|.++.+..-++.|+..+.++.++.+|+++..|++- |.++-++.... -.+|-.+|
T Consensus 457 ------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~g~G 512 (618)
T KOG3762|consen 457 ------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGKGLG 512 (618)
T ss_pred ------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCcchh
Confidence 578888999999999999999999999999999998 88888885443 46888889
Q ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 246 FTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 246 p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
.+|+|.+.+.+|=+..|.+..+..++.++++....+.
T Consensus 513 slIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 513 SLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred hhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999998888888887777776666554433
No 233
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.90 E-value=3.7e-05 Score=82.98 Aligned_cols=136 Identities=10% Similarity=-0.156 Sum_probs=105.5
Q ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccccccc
Q 009195 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLL 176 (540)
Q Consensus 97 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (540)
++.+|+++.+.+.+.....++..++..+.+++.+|+ +.|+++.++.++..++.+...+....+.....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~g----------- 347 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFG----------- 347 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccccC-----------
Confidence 457899999999999999999999999999999987 99999999998888877554322110000000
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhcc
Q 009195 177 GSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (540)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~ 256 (540)
. .+...+....++.+++.+........++.+..|++. +++.++++....++|..+++.+++++.+..
T Consensus 348 ----i---~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 348 ----I---SDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETI 414 (468)
T ss_pred ----C---CCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0 011233344567788888778888999999999998 999999999999999999999999998877
Q ss_pred c
Q 009195 257 G 257 (540)
Q Consensus 257 g 257 (540)
|
T Consensus 415 g 415 (468)
T TIGR00788 415 G 415 (468)
T ss_pred C
Confidence 7
No 234
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.87 E-value=0.0001 Score=79.54 Aligned_cols=163 Identities=13% Similarity=0.127 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIFTTIY 146 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~i~i~~~l~ 146 (540)
.+|...+..++.....|++..+++.|+++..|++..++......+.++..++.+++|+++||. ..+|..+.....++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 678888889999999999999999999986779999999999999999999999999999993 26776666665554
Q ss_pred HH-HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhh
Q 009195 147 LA-GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKT 225 (540)
Q Consensus 147 ~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~ 225 (540)
.+ |.+.+.... +......+.+....+.+...++...-..+......
T Consensus 354 ~~~g~~~l~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~----- 400 (495)
T KOG2533|consen 354 AIIGAISLLAAA----------------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT----- 400 (495)
T ss_pred HHHHHHHHHhhc----------------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----
Confidence 44 434333321 11122222222233333334444444555554433
Q ss_pred hhhhHHHHHHHHHhHHHHHH-HHHHHHhhhccchHHHHHHH
Q 009195 226 HLDRFFNFFYLSVTVGAIVA-FTLVVYIQMEHGWGSAFGAL 265 (540)
Q Consensus 226 ~R~~~~~~~~~~~~lg~~i~-p~i~~~l~~~~gw~~~f~i~ 265 (540)
+|.+..+.+..+.+.+++++ ++..+.....++|.+.|++.
T Consensus 401 k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 401 KALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred HhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 14444444444444444433 33334444556788888443
No 235
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.86 E-value=0.0046 Score=65.74 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHH
Q 009195 111 VNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYL 190 (540)
Q Consensus 111 ~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (540)
..+.-....+..++++.+-|++ |.|+.+.++...+.+..+.... .|...+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~-----------------------------~N~y~~ 105 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF-----------------------------PNSYYL 105 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh-----------------------------cchHHH
Confidence 4445555667778889999987 9999999999988887766655 356778
Q ss_pred HHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 191 YTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 191 ~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
+.+-.+.|+|.+..+.-...+++|..+++.
T Consensus 106 yfssallG~Gaallw~GqG~ylt~~st~~t 135 (461)
T KOG3098|consen 106 YFSSALLGFGAALLWTGQGGYLTSNSTRET 135 (461)
T ss_pred HHHHHHhhhhHHheecccceehhhcCChhh
Confidence 888899999999999999999999988776
No 236
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.79 E-value=0.00021 Score=56.74 Aligned_cols=65 Identities=18% Similarity=-0.002 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 78 ~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
.++...+.-.+.++++.|+. +.|++..+.+.+.++..+...++++++|+++||+ ||++.++....
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~ 73 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHH
Confidence 34444455557788888887 5999999999999999999999999999999998 88877766554
No 237
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.71 E-value=8.2e-05 Score=77.46 Aligned_cols=178 Identities=16% Similarity=0.075 Sum_probs=117.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH----HHHHH-----HHHHHHHHhHHHHHhhhccchHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSN----AVNNF-----LGISQASSVLGGFLADAYLGRYWTI 139 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~----~~~~~-----~~~~~~~~~~~G~lsD~~~GR~~~i 139 (540)
+..+...+..|+.-.++|+...+... +.+.+|+.+.+... -+... ..+...|..+..++.|++ |||++.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~-I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSV-IFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHH-HHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 55566666677777777776555433 33455554433322 11111 112222445666789998 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHH-HHHHHhhcccchhhhhhhhccCCC
Q 009195 140 AIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFGADQFDE 218 (540)
Q Consensus 140 ~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~d~~~~ 218 (540)
+.+.+++++..+.++..-. .. .+...+++.- +..-++.-++......+-+|.||+
T Consensus 382 ~~GF~~~~i~~~~~~~~y~--~~----------------------~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPa 437 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYN--QL----------------------ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPA 437 (538)
T ss_pred HhhHHHHHHHHHHHcCCcc--cc----------------------cccCceeehHHHHHHHHhcCCCceeEEeehhhchH
Confidence 9999999888776665310 00 1111122221 122234445556666777999999
Q ss_pred CCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh-----ccchHHHHHHHHHHHHHHHHHHHH
Q 009195 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM-----EHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 219 ~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~-----~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
+. |+++-++.....-+|++++...-.++.+ ..|.++.|++.++++.+..+..++
T Consensus 438 rv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 438 RV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred HH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 99 9999999888889999999999999988 778999999998888887776554
No 238
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.56 E-value=0.0028 Score=57.61 Aligned_cols=108 Identities=15% Similarity=0.223 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhH
Q 009195 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (540)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (540)
..-.++.-....+..++...+.+++ |.|++++++.+.+.+-...... .+.
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~-----------------------------~~~ 89 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY-----------------------------PNS 89 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh-----------------------------hhH
Confidence 3444444455566667778888987 9999999999888765544432 345
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHH
Q 009195 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVY 251 (540)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~ 251 (540)
..++.+-.+.|++.+..+.....++.+..+++. |++..+++-...+.+..+|.++.-.
T Consensus 90 ~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 90 YTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888889999999999999999999887776 7777777555555555555554433
No 239
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.50 E-value=0.0022 Score=71.84 Aligned_cols=82 Identities=9% Similarity=0.076 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH-HHHHHHhHHHHHhhhccc--hHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLG--RYWTIAIFTTIY 146 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~lsD~~~G--R~~~i~i~~~l~ 146 (540)
.++...+..++....++++.++++.|+++.+|++..+++++.....+ +..++.+++|+++||+ + .|+++.++.++.
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~-~~~~~~~~~~~~~~~ 409 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKF-KLNVKKAAYFAICLS 409 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeee-cccHHHHHHHHHHHH
Confidence 56777888888899999999999999999999999999988887665 6789999999999997 7 456777777666
Q ss_pred HHHHHH
Q 009195 147 LAGLTG 152 (540)
Q Consensus 147 ~i~~~~ 152 (540)
+++.++
T Consensus 410 ~~~~~~ 415 (633)
T TIGR00805 410 TLSYLL 415 (633)
T ss_pred HHHHHH
Confidence 666544
No 240
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.43 E-value=0.19 Score=52.89 Aligned_cols=158 Identities=8% Similarity=-0.019 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHh-hCCChHHHH-HHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 009195 88 LSVNMVTFMFYV-MHKSFADSS-NAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPN 165 (540)
Q Consensus 88 ~~~~~~~yl~~~-lg~~~~~~~-~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~ 165 (540)
.-+++..|+.+. .|++..+.. -+.=++.-......++...+.|.+ |.|++++++.+..++...++.+.
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~--------- 91 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG--------- 91 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH---------
Confidence 346788999987 899988775 444444444555666778999976 99999999988888877776654
Q ss_pred CCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHH
Q 009195 166 QDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVA 245 (540)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~ 245 (540)
.+...+-+..++.|++.+. ..+..+++=-..|++. =.+..++...+.-+|-.++
T Consensus 92 -------------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s 145 (412)
T PF01770_consen 92 -------------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFIS 145 (412)
T ss_pred -------------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 4577777888888888766 4455555555555544 2333334444444554555
Q ss_pred HHHHHHhhh--ccchHHHHHHHHHHHHHHHHHHHHhcc
Q 009195 246 FTLVVYIQM--EHGWGSAFGALAIAMGISNMLFFIGTP 281 (540)
Q Consensus 246 p~i~~~l~~--~~gw~~~f~i~~i~~~~~~~~~~~~~~ 281 (540)
.+++-.+.. ..++....++......+++++.++.++
T Consensus 146 ~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 146 SLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 554444433 345777777877777777777666543
No 241
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.38 E-value=0.0036 Score=68.85 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=104.3
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChH---HHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHH-HH
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFA---DSSNAVNNFLGISQASSVLGGFLADAYLGRYWTI-AI 141 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i-~i 141 (540)
++.|.+...++..++..+.+|++..+.|.+....++-+.. ..++.......+..++..+.|.+.-++ ||-|-. ++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHH
Confidence 3456777777888888888998888878877777766543 456777777788888888889999876 775554 46
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCc
Q 009195 142 FTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSK 221 (540)
Q Consensus 142 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~ 221 (540)
+.++.+++.-.++... + .|....+...++.|+|.|...........-..|++.
T Consensus 386 ~~~~~ta~~Gama~~~------~--------------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~- 438 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAVR------P--------------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED- 438 (599)
T ss_pred HHHHHHHHHHHHHHcc------C--------------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH-
Confidence 6555555444444321 1 122334455678888888876666555555556655
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHHHHHHh
Q 009195 222 DYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI 252 (540)
Q Consensus 222 ~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l 252 (540)
.+...++......+|+.+|..+-..+
T Consensus 439 -----ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 439 -----IGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred -----HHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 88888887777788887776654433
No 242
>PTZ00207 hypothetical protein; Provisional
Probab=97.32 E-value=0.002 Score=70.99 Aligned_cols=177 Identities=12% Similarity=0.036 Sum_probs=121.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCChHH--HHHHHHHHHHHHHHHHhHHHHHhhhccchHH--------
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVM-HKSFAD--SSNAVNNFLGISQASSVLGGFLADAYLGRYW-------- 137 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l-g~~~~~--~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~-------- 137 (540)
..+|.++...++..-+-..+..| .-++-+.+ |.+.++ ..+.+++..++.++|.+..|+++... -||+
T Consensus 353 ~d~Wll~~~~~cg~g~gl~~~~N-~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~-~~~~~~~r~prt 430 (591)
T PTZ00207 353 ARLWCLLWSIFCCVGAHFVIIFN-ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS-QKRRAEDRVPIT 430 (591)
T ss_pred hhHHHHHHHHHHhhCchheeeec-HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH-Hhhccccccchh
Confidence 36788888777766665444444 45777788 773322 33378999999999999999998432 3333
Q ss_pred -HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccC
Q 009195 138 -TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQF 216 (540)
Q Consensus 138 -~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~ 216 (540)
.+.+..+ ..++.+++++.. | ...++++-++.|++.|...+......+|+|
T Consensus 431 ~~l~~~~~-~~~~~lll~~~~------p----------------------~~~L~~~~~lvg~~~G~~~~~~~~i~selF 481 (591)
T PTZ00207 431 IALFIPSV-CIITMLTLFLTL------P----------------------KAALPLPYFIAAFANGFMAATIALVTRTIF 481 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHHC------C----------------------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHh
Confidence 2223333 555555555531 1 146888999999999999999999999999
Q ss_pred CCCCchhhhhhhhHHHHHHHHHhHHHHHH-HHHHHHhhhc----------cc---hHHHHHHHHHHHHHHHHHHHHhccc
Q 009195 217 DERSKDYKTHLDRFFNFFYLSVTVGAIVA-FTLVVYIQME----------HG---WGSAFGALAIAMGISNMLFFIGTPL 282 (540)
Q Consensus 217 ~~~~~~~~~~R~~~~~~~~~~~~lg~~i~-p~i~~~l~~~----------~g---w~~~f~i~~i~~~~~~~~~~~~~~~ 282 (540)
. ++ -++-+++..++..+|+.+- -.+.|.+.+. .| ++..|.+.+++.+++.++.....-+
T Consensus 482 g-k~------~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R 554 (591)
T PTZ00207 482 A-KD------PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQ 554 (591)
T ss_pred c-cc------hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeee
Confidence 9 77 7888888777777777664 3455666532 12 7788888877777776665554433
Q ss_pred c
Q 009195 283 Y 283 (540)
Q Consensus 283 ~ 283 (540)
+
T Consensus 555 ~ 555 (591)
T PTZ00207 555 Y 555 (591)
T ss_pred h
Confidence 3
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.28 E-value=0.015 Score=62.90 Aligned_cols=160 Identities=10% Similarity=-0.088 Sum_probs=102.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH-H--
Q 009195 66 GGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-----MHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRY-W-- 137 (540)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-----lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~-~-- 137 (540)
++-.....+++...+....+.-..+.+..|..+. +|++ -..++..++..+...+..|+.+++=.|. +|| +
T Consensus 265 ~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~ 342 (493)
T PRK15462 265 KELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTV 342 (493)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCC
Confidence 3334555555555555566655666666666654 2332 2245566666666666666666665544 321 1
Q ss_pred ---H-HHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhh
Q 009195 138 ---T-IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGA 213 (540)
Q Consensus 138 ---~-i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 213 (540)
. +.+++++..++.+.+.++..... .....+..++++..++.++|.-+..|...++++
T Consensus 343 s~~~Kfa~g~~~~g~~f~~l~~~~~~~~-------------------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~ 403 (493)
T PRK15462 343 RIWGKFALGLGLMSAGFCILTLSARWSA-------------------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQIT 403 (493)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcC-------------------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHH
Confidence 1 56777777777777766532110 001135667778888999999999999999999
Q ss_pred ccCCCCCchhhhhhhhHHHHHHHH-HhHHHHHHHHHHHHh
Q 009195 214 DQFDERSKDYKTHLDRFFNFFYLS-VTVGAIVAFTLVVYI 252 (540)
Q Consensus 214 d~~~~~~~~~~~~R~~~~~~~~~~-~~lg~~i~p~i~~~l 252 (540)
+..|++. |+..++.+.+. ..+|..++..+.++.
T Consensus 404 ~laP~~~------~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 404 RIEIPGV------TGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HhChHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 99999998764 357766666665554
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.23 E-value=0.4 Score=51.01 Aligned_cols=194 Identities=9% Similarity=-0.121 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
..+.+....++.+.+--..--..+.|+.+.+.-+---.+.....-.+..++..+.-|.+.||. -|.+++..+.+..-+.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~s 81 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLS 81 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHH
Confidence 344555556666665554444567777776554443344444444455566667778889997 9999988887665544
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCc--cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPA--KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHL 227 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R 227 (540)
.+..+.........+. ... .......+.+..++..+.--+..++..+.=-|+...-..+....+
T Consensus 82 v~~s~~~~~~l~~~~~--------------~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~L 147 (432)
T PF06963_consen 82 VAASCALFLLLLSYPS--------------SSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGAL 147 (432)
T ss_pred HHHHHHHHHHHHhCCc--------------cccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhH
Confidence 4433322111000110 000 001111122222222222212222222222344321111111124
Q ss_pred hhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 228 DRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 228 ~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
.+.-+...=.=.+--+++|++.|.+....+...+..+.++..++.+.+=++
T Consensus 148 a~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 148 ARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 343333333334567789999999988888887777766666666554443
No 245
>PRK03612 spermidine synthase; Provisional
Probab=97.21 E-value=0.038 Score=60.39 Aligned_cols=167 Identities=11% Similarity=0.078 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH-HHHHHHH-HHHHHHHHhh
Q 009195 80 AERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIA-IFTTIYL-AGLTGITLCA 157 (540)
Q Consensus 80 ~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~-i~~~l~~-i~~~~~~~~~ 157 (540)
+..++..+.-....-.+...+|-+....+.+++++.++..+|..++++++++. -|+...+ +...+.. +...++....
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll~~~~ 103 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALILYAAF 103 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333445556677889988999999999999999999888887543 2332211 1111111 1111111110
Q ss_pred hccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHH
Q 009195 158 TMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS 237 (540)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~ 237 (540)
. . .. .....++...++.++..|+..|....+..+... +. -++..+-.|..
T Consensus 104 ~-~---~~-------------------~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ 153 (521)
T PRK03612 104 A-F---QG-------------------LSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAA 153 (521)
T ss_pred H-H---HH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhH
Confidence 0 0 00 111222334456777777777776666544322 11 23445556667
Q ss_pred HhHHHHHHHHHHHHhhh-ccc-hHHHHHHHHHHHHHHHHHHH
Q 009195 238 VTVGAIVAFTLVVYIQM-EHG-WGSAFGALAIAMGISNMLFF 277 (540)
Q Consensus 238 ~~lg~~i~p~i~~~l~~-~~g-w~~~f~i~~i~~~~~~~~~~ 277 (540)
..+|+++|.++.+++.- ..| .+..+.+..+..++++++++
T Consensus 154 ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 154 DYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred HhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 78889989888887654 566 44444444444444444433
No 246
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.12 E-value=0.55 Score=50.60 Aligned_cols=163 Identities=11% Similarity=0.057 Sum_probs=99.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-----hHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKS-----FADSSNAVNNFLGISQAS-SVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~-----~~~~~~~~~~~~~~~~~~-~~~~G~lsD~~~GR~~~i~ 140 (540)
.++.++...+.-|+-.+.++.+.+ +.+.+..+ .....++-+...+.+.+. .++-+++++|+ +|++.+.
T Consensus 5 E~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~ 78 (472)
T TIGR00769 5 ELKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFY 78 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHH
Confidence 345666666666776666654433 56666553 245556666555544444 78889999997 9999998
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCC-----Cccc----------hhHHHHHHHHHHHHHhhcccc
Q 009195 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCE-----PAKS----------WQMLYLYTVLYITGFGAAGIR 205 (540)
Q Consensus 141 i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~~~l~g~g~g~~~ 205 (540)
+....+.+...+.++... |..+ .-|+...|. .|.+ +....+++ ...+-.....
T Consensus 79 ~~~~~F~~~f~lF~~vl~-----p~~~----~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv---~~elw~~~vv 146 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIY-----PLSD----LLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYV---MAELWGSVVL 146 (472)
T ss_pred HHHHHHHHHHHHHHHHHh-----cchh----hcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHH---HHHHHHHHHH
Confidence 887777776666665522 1100 000000000 0000 00111111 1222223333
Q ss_pred h-hhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhh
Q 009195 206 P-CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQ 253 (540)
Q Consensus 206 ~-~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~ 253 (540)
+ ...+++.|.+..++ -.|.++++..+.|+|..+++.+..++.
T Consensus 147 S~lFW~fandi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 147 SLLFWGFANQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 56788999999888 789999999999999999999988876
No 247
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.06 E-value=0.00076 Score=70.38 Aligned_cols=166 Identities=11% Similarity=0.086 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHHHHHH-HH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIF-TT 144 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~i~i~-~~ 144 (540)
+.++.+..+.+...+++-.=.++.++|++ .+|.+..-.+.+-.+..+...+.+++.|..|||. +||||.++.. .+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56666666666666666555567777775 7899988888888888888899999999999985 5887776655 44
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 145 IYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 145 l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
...++.++...+......+-. ..-...+......++++..+.=+..-......=++++|+....+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd-----------~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~---- 175 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGD-----------NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA---- 175 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcC-----------CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh----
Confidence 455566665554321111100 00001223455566667777777776777888899999997666
Q ss_pred hhhhh-HHHHHHHHHhHHHHHHHHHHHHh
Q 009195 225 THLDR-FFNFFYLSVTVGAIVAFTLVVYI 252 (540)
Q Consensus 225 ~~R~~-~~~~~~~~~~lg~~i~p~i~~~l 252 (540)
+-+ +.+++.+...+|..+|...++|.
T Consensus 176 --~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 176 --KKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred --hhhccchhHHHHHHhcceeeeeccccc
Confidence 333 88888888899998887777644
No 248
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.01 E-value=0.033 Score=60.86 Aligned_cols=145 Identities=10% Similarity=0.081 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
....+.+..+...+.+|+. .+....+|.+.......... .........+.+-|+. |||.....+.++..++
T Consensus 323 ~~~~~~~~~~~~~~~y~gl-----~~~~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~ 393 (521)
T KOG0255|consen 323 RTLYLLFIWFVFSLVYYGL-----SLNVSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIG 393 (521)
T ss_pred HHHHHHHHHHHHhHHHHhh-----hhhhhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHH
Confidence 4444444444444444443 33334456554433333332 3344445557899997 9999999999999988
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
.+..+.... . .......+...+..++.+........+.+|++|+.. |..
T Consensus 394 ~~~~~~~~~-----~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~------r~~ 442 (521)
T KOG0255|consen 394 LLLFGWLPD-----D--------------------LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV------RNT 442 (521)
T ss_pred HHHHHHhhc-----c--------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH------HHH
Confidence 888876521 0 110122222233334444445555888999999998 999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
+.+.......+|++++|.+......
T Consensus 443 ~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 443 AVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999988765544
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.00 E-value=0.0036 Score=65.44 Aligned_cols=186 Identities=13% Similarity=0.043 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG 149 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~ 149 (540)
...++.+...+....||++.+.+-.-+ ..-|++...+|.+.....++++++.++.|.++||.-.-|.++++......++
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 344444444455555555554432222 3557777889999999999999999999999999844556666666665555
Q ss_pred HHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhh
Q 009195 150 LTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDR 229 (540)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~ 229 (540)
...+..... .+ .....++..-.+.|++..+..|...-+..|..-+..+ ++
T Consensus 346 ~~~l~~~t~----~~--------------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E------~t 395 (480)
T KOG2563|consen 346 TLMLLTCTL----FL--------------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE------GT 395 (480)
T ss_pred HHHHHHhhc----cC--------------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC------cc
Confidence 322221111 01 1233455555678888888888888888887644442 33
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhhccc----hHHHHHHHHHHHHHHHHHHHHhccccccc
Q 009195 230 FFNFFYLSVTVGAIVAFTLVVYIQMEHG----WGSAFGALAIAMGISNMLFFIGTPLYRHR 286 (540)
Q Consensus 230 ~~~~~~~~~~lg~~i~p~i~~~l~~~~g----w~~~f~i~~i~~~~~~~~~~~~~~~~~~~ 286 (540)
..++.+...++.+.+-.++.+...+..+ |...-+.......+.+++..+.++.++..
T Consensus 396 SsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 396 SSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred cceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 3445445555656666666676666555 33333333344444445555555555433
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.98 E-value=0.012 Score=60.38 Aligned_cols=152 Identities=14% Similarity=0.078 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccch-HHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFM-FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGR-YWTIAIFTTIY 146 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR-~~~i~i~~~l~ 146 (540)
...+.++....+...-.|....+...++ .+.+|+++.+.+-+.+.-.+++.+.++.-.+..|+..|- +-....+..+.
T Consensus 260 i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~ 339 (451)
T KOG2615|consen 260 ISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLI 339 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHH
Confidence 3566666666555555556666666666 467999999999888888888888787778888887443 33444444444
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.-..+++..+ .....++.+..+..+..+...++...++....|+..
T Consensus 340 vP~~llls~~----------------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------ 385 (451)
T KOG2615|consen 340 VPAFLLLSLA----------------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------ 385 (451)
T ss_pred HHHHHHHhcc----------------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------
Confidence 4444444443 234667788888888888888999999999999988
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
||+..+++.....++-++||.++|.+..
T Consensus 386 rG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 386 RGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 9999999999999999999999987754
No 251
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.88 E-value=0.061 Score=57.64 Aligned_cols=69 Identities=14% Similarity=0.050 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 87 ~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
.+.+.+++|.. ++|+++.+.+.+...-.+..+++.|++|++|||+--||+.++.+.+...++.+++.+.
T Consensus 29 ~l~pll~vy~k-QLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv 97 (618)
T KOG3762|consen 29 SLFPLLAVYFK-QLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFV 97 (618)
T ss_pred ccchHHHHHHH-HcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeec
Confidence 46677777775 7999999999999999999999999999999998445556666666666566555543
No 252
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.68 E-value=0.023 Score=45.76 Aligned_cols=66 Identities=8% Similarity=-0.072 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 90 VNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 90 ~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
+.+.+.++++.++|.++++++.+...+|+.+|.+...++.++. .+++.+..+.++..+..+.+++.
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456678899999999999999999999999999999999986 78888999998888888888775
No 253
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=96.49 E-value=0.0025 Score=62.04 Aligned_cols=176 Identities=15% Similarity=0.047 Sum_probs=97.4
Q ss_pred HHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccccc
Q 009195 93 VTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRI 172 (540)
Q Consensus 93 ~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 172 (540)
..|+-+.+|+...+.+..........++...+.|-|+|+. |||+......+ .++++.+.-+ .
T Consensus 60 vYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtyci----tYiLsCiTKh----S--------- 121 (454)
T KOG4332|consen 60 VYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCI----TYILSCITKH----S--------- 121 (454)
T ss_pred eeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehH----HHHHHHHhhc----C---------
Confidence 4566678888888888777777777777778889999997 99998665544 4444433211 0
Q ss_pred ccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhh-hhhccCCCCCchhhhhhhhHHHH-HHHHHhHHHHHHHHHHH
Q 009195 173 SQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSS-FGADQFDERSKDYKTHLDRFFNF-FYLSVTVGAIVAFTLVV 250 (540)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~d~~~~~~~~~~~~R~~~~~~-~~~~~~lg~~i~p~i~~ 250 (540)
.+.-.++++|++-|+..+...+...+ +++|.-.++. -+.+....-++= ..+...+-+.++.+.+.
T Consensus 122 ------------pqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~-FeqqWls~TFskA~ffgNglvAiiaGlfgn 188 (454)
T KOG4332|consen 122 ------------PQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRG-FEQQWLSVTFSKAVFFGNGLVAIIAGLFGN 188 (454)
T ss_pred ------------CceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccC-ChHhhhhHHHHHHHHhhccHHHHHHHHHHH
Confidence 23446789999999999887766654 4456543322 111111111111 11222333444445555
Q ss_pred Hhhhccc--hHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHH
Q 009195 251 YIQMEHG--WGSAFGALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQV 299 (540)
Q Consensus 251 ~l~~~~g--w~~~f~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (540)
.+.+.++ --.+|-..+....++..+.+-.+.+.-..+.+...+.+-++.
T Consensus 189 ~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~g 239 (454)
T KOG4332|consen 189 LLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKG 239 (454)
T ss_pred HHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhH
Confidence 5555543 445565555444444444333333333333333444444443
No 254
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.21 E-value=0.0012 Score=72.31 Aligned_cols=180 Identities=9% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH-HHHHHHhHHHHHhhhc-cchHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG-ISQASSVLGGFLADAY-LGRYWTIAIFTTIYL 147 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~-~~~~~~~~~G~lsD~~-~GR~~~i~i~~~l~~ 147 (540)
......+....+.+...++.+++|.|+..+++.+.++++++.....+ +..+|.+++|++..|+ ++.|+.+.+..+..+
T Consensus 306 ~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~ 385 (539)
T PF03137_consen 306 VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSI 385 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHH
Confidence 45666777777888888899999999999999999999988876554 7789999999999987 345555555554444
Q ss_pred HHHHH---HHHhh----hccccCCCC-------------Cccccccc------ccCCCCCccchhHHHHHHHHHHHHHhh
Q 009195 148 AGLTG---ITLCA----TMKVFMPNQ-------------DNCDRISQ------LLGSCEPAKSWQMLYLYTVLYITGFGA 201 (540)
Q Consensus 148 i~~~~---~~~~~----~~~~~~~~~-------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~g~g~ 201 (540)
+..+. ..+.. ....+...+ ..|+.... ....|+.+-......+++..++..+..
T Consensus 386 v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~ 465 (539)
T PF03137_consen 386 VSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFT 465 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHH
Confidence 44333 11110 000000111 01111000 012244331223444555555555555
Q ss_pred cccchhhhhhhhccCCCCCchhhhhhhhHHHH-HHHHHhHHHHHHHHHHHHhhhc
Q 009195 202 AGIRPCVSSFGADQFDERSKDYKTHLDRFFNF-FYLSVTVGAIVAFTLVVYIQME 255 (540)
Q Consensus 202 g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~-~~~~~~lg~~i~p~i~~~l~~~ 255 (540)
+..........-+.+++++ |..+.++ +-+...+|.+=||++-|++.|.
T Consensus 466 ~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 466 FMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------------
T ss_pred HhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 5544444455568888888 9999999 4555678888999999998885
No 255
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.16 E-value=0.025 Score=60.68 Aligned_cols=127 Identities=12% Similarity=0.081 Sum_probs=102.8
Q ss_pred HHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHH-HHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCccc
Q 009195 92 MVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGG-FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCD 170 (540)
Q Consensus 92 ~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G-~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 170 (540)
+..|+...++++..+.+...+.......++.++.. .+.-. +|-|+++.++.+...+.....+++
T Consensus 264 ~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~-l~~~~~i~lGl~~~~~~~~~~af~-------------- 328 (463)
T KOG2816|consen 264 LLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI-LGEKRLISLGLLSEFLQLLLFAFA-------------- 328 (463)
T ss_pred EEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhHhhHHHHHHHHHHHHHHHh--------------
Confidence 35678889999999999999999888888888887 45554 598889999999999999988887
Q ss_pred ccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHH
Q 009195 171 RISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVV 250 (540)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~ 250 (540)
++.++.+...++.++ .+...+..-++.+-+..+++ +++.+++......+.++++|.+-+
T Consensus 329 --------------~~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~ 387 (463)
T KOG2816|consen 329 --------------TETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYG 387 (463)
T ss_pred --------------ccchhhhHHHHHHHh-hcchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHH
Confidence 445666666654444 46667888899999999988 999999999988888888888776
Q ss_pred Hhhh
Q 009195 251 YIQM 254 (540)
Q Consensus 251 ~l~~ 254 (540)
.+..
T Consensus 388 ~i~~ 391 (463)
T KOG2816|consen 388 NIFA 391 (463)
T ss_pred HHHH
Confidence 6643
No 256
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.77 E-value=0.22 Score=53.06 Aligned_cols=160 Identities=13% Similarity=0.027 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHhhCCC----hHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---H----HHHHHHHHHHHHHHHHHHh
Q 009195 88 LSVNMVTFMFYVMHKS----FADSSNAVNNFLGISQASSVLGGFLADAYLGRY---W----TIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 88 ~~~~~~~yl~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~---~----~i~i~~~l~~i~~~~~~~~ 156 (540)
..+.+..|..+..+-+ .-...+..+.-.+..++..++..++--+. ||+ + -+-++.++...+.+++...
T Consensus 303 ~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~ 381 (498)
T COG3104 303 MGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLA 381 (498)
T ss_pred ccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3445555655432211 12334555555566666667777776664 433 2 2344555555555555544
Q ss_pred hhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHH
Q 009195 157 ATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYL 236 (540)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~ 236 (540)
...... ++...++.+++.+.+++++|.=++.|...++++...|++- .+..++.+.+
T Consensus 382 ~~~~~~------------------~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfL 437 (498)
T COG3104 382 GIWFGG------------------PSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFL 437 (498)
T ss_pred HHhhcC------------------CCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHH
Confidence 211000 0112457788888899999999999999999999999877 8888888888
Q ss_pred HHhHHHHHHHHHHHH------hhhccchHHHHHHHHHHHHHH
Q 009195 237 SVTVGAIVAFTLVVY------IQMEHGWGSAFGALAIAMGIS 272 (540)
Q Consensus 237 ~~~lg~~i~p~i~~~------l~~~~gw~~~f~i~~i~~~~~ 272 (540)
....|..++..+.+. ..+.......|+......++.
T Consensus 438 t~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~ 479 (498)
T COG3104 438 TVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVI 479 (498)
T ss_pred HHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHH
Confidence 888888777666652 122233444555555444333
No 257
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.73 E-value=3.3 Score=43.58 Aligned_cols=128 Identities=9% Similarity=0.036 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHH
Q 009195 110 AVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLY 189 (540)
Q Consensus 110 ~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (540)
++.+-.+-..+.-+++-+..+|+ --+.=+.++.++.++|+++.+++ .+...
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~----------------------------~~v~~ 114 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFS----------------------------PSVWV 114 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeec----------------------------cchhH
Confidence 33334444555556667778876 42323344455667777777664 35666
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccc--hHHHHHHHHH
Q 009195 190 LYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHG--WGSAFGALAI 267 (540)
Q Consensus 190 ~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~g--w~~~f~i~~i 267 (540)
-+++..+.+++.|.-....-++.+ .+++. ..+.+..+...++++|+..=..+.. .| .|..+.+...
T Consensus 115 ~l~Gv~las~ssg~GE~tfL~lt~-~y~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~ 182 (402)
T PF02487_consen 115 RLLGVVLASLSSGLGEVTFLSLTH-FYGKS----------SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLV 182 (402)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHH-hcCcc----------ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHH
Confidence 677888888888877777766644 44422 2333444455556666554444444 44 4556655554
Q ss_pred HHHHHHHHHHH
Q 009195 268 AMGISNMLFFI 278 (540)
Q Consensus 268 ~~~~~~~~~~~ 278 (540)
+.++.++.+++
T Consensus 183 lp~~~~~~~f~ 193 (402)
T PF02487_consen 183 LPAIFLLSYFF 193 (402)
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 258
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.71 E-value=0.54 Score=50.27 Aligned_cols=118 Identities=19% Similarity=0.087 Sum_probs=76.4
Q ss_pred HHHHHHHHhHHHHHhhhc--cchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHH
Q 009195 115 LGISQASSVLGGFLADAY--LGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYT 192 (540)
Q Consensus 115 ~~~~~~~~~~~G~lsD~~--~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (540)
..+..++.++.+.+++|. +||++++.++..++.++.++..+.... ..|- . +++.-+....++.....+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~--dap~----~----~t~~~~~~~~~~~~~~~i 358 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPN--DAPL----R----PTDSPPLLFTPSYYLALI 358 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccc--cCCC----C----CCcccccccccchhHHHH
Confidence 344455566677777664 499999999999999888877765321 1100 0 111222223334444555
Q ss_pred HHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 009195 193 VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (540)
Q Consensus 193 ~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~ 249 (540)
.-+++|++.++.......++++..| ++ |..+++++-+-..++..++.+..
T Consensus 359 i~~l~G~~D~~~~t~~~~ii~~~~~-~~------~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 359 IGFLLGFGDACFNTQRYVIIALLYP-DD------RAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhc-Cc------hHHHHHHHHHHHHHHHHHHhhhh
Confidence 5678999999999999999999994 44 77888886666666555444433
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.24 E-value=0.83 Score=48.66 Aligned_cols=135 Identities=10% Similarity=-0.060 Sum_probs=101.8
Q ss_pred HHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCc
Q 009195 89 SVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDN 168 (540)
Q Consensus 89 ~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~ 168 (540)
-..+..|+... |++....+..-+...+....+..+..++.+|+ |--|+=+++.....+...++..+... +.
T Consensus 278 ~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~----~~--- 348 (432)
T PF06963_consen 278 GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWA----PG--- 348 (432)
T ss_pred cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhc----CC---
Confidence 34567888866 99999999999999999999999999999998 98888888877766655555443221 11
Q ss_pred ccccccccCCCCCc-cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 009195 169 CDRISQLLGSCEPA-KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (540)
Q Consensus 169 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~ 247 (540)
+| ...+...++.+..+-=+|.=++--+..-++-|..|+++ |+...+.-+...++.-.+...
T Consensus 349 ------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 349 ------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred ------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHH
Confidence 00 11345566666667777877888888999999999888 999999987777877776655
Q ss_pred HHH
Q 009195 248 LVV 250 (540)
Q Consensus 248 i~~ 250 (540)
++-
T Consensus 411 ~~i 413 (432)
T PF06963_consen 411 LTI 413 (432)
T ss_pred HHh
Confidence 443
No 260
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=95.12 E-value=0.094 Score=55.31 Aligned_cols=137 Identities=8% Similarity=-0.016 Sum_probs=75.6
Q ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhc---cchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccc
Q 009195 97 FYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAY---LGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (540)
Q Consensus 97 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~---~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (540)
.+-.|.+..+..+...+...+..+|.++||.++||+ +-|-.+.....+....+..+........ +. .+
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~---~~--~~---- 345 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLF---PA--FT---- 345 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHH---Hh--hh----
Confidence 334456666667788888899999999999999994 1111222222222222211111110000 00 00
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHhhcc-cchhhhhhhhccCCCCCchhhhhhhhHHHHHHHH-HhHHHHHHHHHHHH
Q 009195 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAG-IRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLS-VTVGAIVAFTLVVY 251 (540)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~-~~lg~~i~p~i~~~ 251 (540)
.....+....++.|+.... -.+.....+.|..|++. |.+++++.+.. ..+|-.-+|.+.|.
T Consensus 346 -----------~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~------Rt~a~a~~~~~~h~fgd~~~p~ivGi 408 (493)
T KOG1330|consen 346 -----------SSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSR------RTTAYALDTVFEHIFGDAASPYIVGI 408 (493)
T ss_pred -----------hHHHHHHHHHHHHHHHHHhcccccccceeeEecCccc------ccHHHHHHHHHHHHhccCCCcceehh
Confidence 1112222333444444332 23444567789999998 99999995554 45666666668888
Q ss_pred hhhcc-chH
Q 009195 252 IQMEH-GWG 259 (540)
Q Consensus 252 l~~~~-gw~ 259 (540)
+.++. ||+
T Consensus 409 lsd~l~g~~ 417 (493)
T KOG1330|consen 409 LSDKLRGYK 417 (493)
T ss_pred HHHHhhCCC
Confidence 87754 555
No 261
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=94.99 E-value=0.2 Score=42.93 Aligned_cols=60 Identities=15% Similarity=0.283 Sum_probs=46.7
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhh
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAY 514 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~ 514 (540)
+|++.|++++++......++..+++.+.+.+.+..+ +.+.|++.+++.++..+..+++.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG------------------WRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc------------------hHHHHHHHHHHHHHHHHHHhhcCC
Confidence 899999999999999999999999999988765333 345677777777766666555543
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.10 E-value=13 Score=42.04 Aligned_cols=254 Identities=12% Similarity=-0.019 Sum_probs=150.1
Q ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccc
Q 009195 96 MFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQL 175 (540)
Q Consensus 96 l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (540)
...-.+...........++....++..++....+|-.-|+...+.......++..+...+.+... .+
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a--~~----------- 77 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA--IP----------- 77 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc--Cc-----------
Confidence 33334445556678888899999999999999999876777788888888887777776653210 00
Q ss_pred cCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhc
Q 009195 176 LGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQME 255 (540)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~ 255 (540)
.........++.+.+.++.++..++-+.+.+++++.-+ ...+.+..++|++..+.+.+ |.+++..+...
T Consensus 78 -------~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~---~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~ 146 (654)
T TIGR00926 78 -------SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFE---ERQLSLRSRFFSFFYFAINA-GSLISTIITPI 146 (654)
T ss_pred -------ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcC---ccchhHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 01223444556677888889999999999999998755 24455789999999887765 55666666554
Q ss_pred cc-hHH------HHH-HHHHHHHHHHHHHHHhcccccccCCCCCchhHHHHHHHHHHHhhccccCCcccccccccCCCcc
Q 009195 256 HG-WGS------AFG-ALAIAMGISNMLFFIGTPLYRHRLPGGSPLTRVAQVLVAAFRKRHAAFSSSELIGLYEVPGKHS 327 (540)
Q Consensus 256 ~g-w~~------~f~-i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~k~~~~~~~~s~~~~l~~~~~~~~ 327 (540)
.. +.. .+. ..++.+++.++.++......+..++.+.....+.++.....+..+
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~------------------- 207 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR------------------- 207 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH-------------------
Confidence 32 221 132 444445555555555544444444433332222222211111100
Q ss_pred cccCCcccccCCCchhhHHHhhhhccccCCCCCCccc--chhhHHHHHHHHhhhhhhhhhHHHHHHhhhhhhHHHHHHhh
Q 009195 328 AIKGSGKIAHTDDFRCLDKAALELKEDVINPSPWKLC--TVTQVEEVKTLVRLVPIPACTIMLNVILTEFLTLSVQQAYT 405 (540)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~k~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 405 (540)
+.....+......|.+. .....++++.+.+.+.++.....+++.+.++......+...
T Consensus 208 --------------------~~~~~~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~q 267 (654)
T TIGR00926 208 --------------------KRFSTRSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQ 267 (654)
T ss_pred --------------------HhhccCCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Confidence 00000000000112111 22223457778888888888888888877766666666666
Q ss_pred hccccCC
Q 009195 406 MNTHMGH 412 (540)
Q Consensus 406 ~~~~~~~ 412 (540)
++...++
T Consensus 268 a~~m~~~ 274 (654)
T TIGR00926 268 ATRMDGD 274 (654)
T ss_pred HHHhcCc
Confidence 6654343
No 263
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.63 E-value=0.22 Score=53.36 Aligned_cols=201 Identities=11% Similarity=0.057 Sum_probs=116.1
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHH--HHHHHHhHHHHHhhhccch---HHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLG--ISQASSVLGGFLADAYLGR---YWTI 139 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~--~~~~~~~~~G~lsD~~~GR---~~~i 139 (540)
+-.|+..+.++...+...+.+..+-+-.+......++++.+++....+.... +.....+...+..-++ |+ |..+
T Consensus 258 ~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l-~~i~~r~~~ 336 (488)
T KOG2325|consen 258 KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRL-GKIDKRRII 336 (488)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHh-hhhccceee
Confidence 3456678888888888888887777777777778889987777544444332 2223333444444443 43 3333
Q ss_pred HHH-HHHHHHHHHHHHHhhhcc-ccCCC---CCcccccccccC-CCCCccchhHHHHHHHH-HHHHHhhcccchhhhhhh
Q 009195 140 AIF-TTIYLAGLTGITLCATMK-VFMPN---QDNCDRISQLLG-SCEPAKSWQMLYLYTVL-YITGFGAAGIRPCVSSFG 212 (540)
Q Consensus 140 ~i~-~~l~~i~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~ 212 (540)
..+ ...+....+.+.-..... .+.+. .-+|+- ..+ -|......+...++.+. ++.|++.-.+.....++.
T Consensus 337 ~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~---~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tly 413 (488)
T KOG2325|consen 337 LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDF---EEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLY 413 (488)
T ss_pred eehHHHHHHhhheeeeeccccccccccccccccCcCc---ccchhhccCcccChhhheeehhheeccccccccchHHHHH
Confidence 333 332222222111110000 00000 001110 001 14444444455555553 456666666667778899
Q ss_pred hccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 009195 213 ADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNML 275 (540)
Q Consensus 213 ~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~ 275 (540)
+++..+++ .+..-+++.....++..+||++...+....|.++...+.....++...+
T Consensus 414 SkiLgp~~------q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 414 SKILGPRD------QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred HHHhCCcc------ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHH
Confidence 99999998 7788888888889999999999999888888887766555544443333
No 264
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.44 E-value=1.3 Score=46.48 Aligned_cols=63 Identities=8% Similarity=0.074 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
+.+.+++..+..|+..|+.+.+....+.|..++++ |..+++...++-.+|..++.+++-++..
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 46666677788999999999999999999988877 9999999888888888888777766543
No 265
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.32 E-value=3.1 Score=43.15 Aligned_cols=159 Identities=14% Similarity=0.129 Sum_probs=84.4
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhh-----hccchHHH
Q 009195 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLAD-----AYLGRYWT 138 (540)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD-----~~~GR~~~ 138 (540)
.++..+.+..+.+.-+++..-. +.... .+++-+.-|.|-++.+....++ --+-.-++++++.| |+ ||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~-GL~~~-iP~lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~-Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPL-GLIGA-IPLLLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRF-GRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCch-hHhhh-hHHHhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhh-ccccc
Confidence 4555667777777777776655 56554 4455556677655544322221 11223468888999 86 99998
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCC
Q 009195 139 IAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDE 218 (540)
Q Consensus 139 i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~ 218 (540)
.++-. -+.+|.....++......+ +.+-+. ++...+....++.-+..+.--.++-+..-.+..+
T Consensus 101 Wvvp~-q~llG~~mllLs~~v~~~~------------g~ng~~---p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~ 164 (510)
T KOG3574|consen 101 WVVPC-QYLLGLFMLLLSYLVDRGL------------GGNGGL---PNVVALTLLFLLLNFLAATQDIAVDGWALTMLSR 164 (510)
T ss_pred eeeeh-HHHHHHHHHHHhhCCCccc------------ccCCCC---cchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCH
Confidence 76543 2334444444442211111 101111 2333333333444455454445555566666666
Q ss_pred CCchhhhhhhhHHHHHHHHHhHHHHHHHHHH
Q 009195 219 RSKDYKTHLDRFFNFFYLSVTVGAIVAFTLV 249 (540)
Q Consensus 219 ~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~ 249 (540)
++ .+-+-.....+.+.|..++..+.
T Consensus 165 e~------lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 165 EN------LGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hh------cCchhHHHHHHHhhhHHhhccee
Confidence 66 55555556667777777765543
No 266
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.77 E-value=0.47 Score=53.26 Aligned_cols=75 Identities=11% Similarity=0.131 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHH-HHHHHHHHhHHHHHhhhc-cchHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNF-LGISQASSVLGGFLADAY-LGRYWTIAIFTT 144 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~G~lsD~~-~GR~~~i~i~~~ 144 (540)
......+...++.+.+-+..+++|-|+.+++|.+.+.+..+.... ..+..+|.+++|++.-|+ +.-|.+..+.++
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~ 469 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIV 469 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHH
Confidence 567778888889999999999999999999999999999887554 456778899999999887 344444444443
No 267
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=89.93 E-value=3.4 Score=41.95 Aligned_cols=120 Identities=16% Similarity=0.037 Sum_probs=66.6
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHH
Q 009195 64 KTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFT 143 (540)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~ 143 (540)
++..-|.++.+...-++...++ .-..++.......+|-.. .+.+ -...+...++.+.+..+ +|-|+++.++.
T Consensus 24 ~~~~~knv~i~s~~fl~~f~a~-~gl~nlq~~vn~~lg~~s--l~~~----y~~l~~s~m~~~~~Ir~-~g~K~tm~lav 95 (390)
T KOG3097|consen 24 RLGILKNVLILSIAFLLTFTAY-LGLQNLQTSVNYDLGTVS--LGAL----YLSLIDSSMFMPLLIRF-LGTKWTMVLAV 95 (390)
T ss_pred ccchhhhhhHHHHHHHHHHHHH-HHHHHHHHHHhcCcccch--hhhh----hHHHHHHHHHHHHHHHH-HhhHHHHHHHH
Confidence 3444455555555444444444 333444444443333211 1111 11223333444456665 49999998887
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 144 TIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 144 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
..+.+....-.. ..+..++..-.+.|++.+.+++.-.+|++++-....
T Consensus 96 ~~Y~lyiA~Nl~-----------------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya 143 (390)
T KOG3097|consen 96 FPYALYIAANLE-----------------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYA 143 (390)
T ss_pred HHHHHHHHhhcc-----------------------------hhHHhhccHHHhhccccccccccCcceecHHHHHHH
Confidence 665543321111 245556667778999999999999999988765443
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.19 E-value=3.9 Score=43.76 Aligned_cols=155 Identities=10% Similarity=-0.013 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCh-HHHHHHHHHHHHHHHHHHhHHHHHhhhccchH-HHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSF-ADSSNAVNNFLGISQASSVLGGFLADAYLGRY-WTIAIFTTI 145 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-lg~~~-~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~-~~i~i~~~l 145 (540)
+.+|...+..++..+....+.+......+.. .+.++ ...-....+|.++-.+|..+..+.. +-++| +.+.+..+.
T Consensus 269 kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~--~p~~~~~~l~i~s~~ 346 (437)
T TIGR00939 269 TKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM--WPDEDSRWLPILSFL 346 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE--eeCCCccchHHHHHH
Confidence 4445555544444444433333322222222 12222 2445677778888888887554431 11222 133344444
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccccccccCCCCCc-cchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhh
Q 009195 146 YLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPA-KSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYK 224 (540)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~ 224 (540)
=++...++.++... +. .+ .| .=.+-...++..++.|+..|-.......+..+..++++
T Consensus 347 R~iFIPlf~lcn~~----~~------~~-------~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e---- 405 (437)
T TIGR00939 347 RVLFIPLFLLCNYP----QR------SR-------LPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE---- 405 (437)
T ss_pred HHHHHHHHHHhcCC----cc------cc-------CCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH----
Confidence 44444443333110 00 00 00 00133455666789999999888888888889887655
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHH
Q 009195 225 THLDRFFNFFYLSVTVGAIVAFTL 248 (540)
Q Consensus 225 ~~R~~~~~~~~~~~~lg~~i~p~i 248 (540)
|..+-.+..++.++|-.+|..+
T Consensus 406 --~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 406 --REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHH
Confidence 6566555555666666555443
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=87.23 E-value=48 Score=35.88 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=53.2
Q ss_pred HHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 195 YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (540)
Q Consensus 195 ~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~ 271 (540)
++.++.........-..+.+++|++.+ |...++-++...++...+..++++.+.+..||.....+.-+..++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~-----~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNE-----YSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345555556666667788899986553 899999988888888877777779999999999877765555444
No 270
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=86.49 E-value=2.1 Score=45.69 Aligned_cols=133 Identities=10% Similarity=-0.085 Sum_probs=76.3
Q ss_pred HhhC---CChHHHHHHHHHHHHHHHHHHhHHH-HHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccc
Q 009195 98 YVMH---KSFADSSNAVNNFLGISQASSVLGG-FLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRIS 173 (540)
Q Consensus 98 ~~lg---~~~~~~~~~~~~~~~~~~~~~~~~G-~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (540)
..++ +++...+.+..+..++..++..+.. ++++ . .-|+++.++.++.++..+.-.+...-+..
T Consensus 245 ~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~-~-~~R~~~~~t~~~~~~~~l~~~~lv~~~n~----------- 311 (433)
T PF03092_consen 245 DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSN-W-SWRRIFVVTTLVSVLASLFDLLLVTRWNL----------- 311 (433)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C-CHHHHHHHHHHHHHHHhcccEEEEEEEee-----------
Confidence 3455 7877777666666666666665554 3455 3 56677766665554443322211000000
Q ss_pred cccCCCCCccchhHHHHHH-HHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHh
Q 009195 174 QLLGSCEPAKSWQMLYLYT-VLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYI 252 (540)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l 252 (540)
.-|.|. . .+.. --++..+..+.-......+.+|+-|+.. -++.+++.....|+|..++..++..+
T Consensus 312 ----~~Gi~d---~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l 377 (433)
T PF03092_consen 312 ----DLGIPD---Q-WFALGDTILEEVIGMIAFMPSLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFL 377 (433)
T ss_pred ----eeCcCC---e-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0 1111 1233444444445556677899999888 78888888888889888888888887
Q ss_pred hhccc
Q 009195 253 QMEHG 257 (540)
Q Consensus 253 ~~~~g 257 (540)
.+..+
T Consensus 378 ~~~~~ 382 (433)
T PF03092_consen 378 MELFG 382 (433)
T ss_pred HHHcC
Confidence 66544
No 271
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=86.06 E-value=56 Score=35.54 Aligned_cols=171 Identities=12% Similarity=0.051 Sum_probs=91.0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCChHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVM---HKSFADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~l---g~~~~~~~~~~~~~~~-~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
+..++.++.+.+..|+..+.+..+. -+++.+ ..+.+....+-....+ ...+...+-.++++++ +|.+++.
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHH
Confidence 3445566666666666655553221 122222 1233333443333333 3445566779999997 9999988
Q ss_pred HHHHHHHHHHHHHHHhhhc--cccCCCCCcccccccccCCCCCccchhHHHHHH-------HHHHHH-Hhhcccch-hhh
Q 009195 141 IFTTIYLAGLTGITLCATM--KVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYT-------VLYITG-FGAAGIRP-CVS 209 (540)
Q Consensus 141 i~~~l~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~g-~g~g~~~~-~~~ 209 (540)
+....+.....+.++...+ -.++|+. .+. ...-..+..-. +.+.+ ..++.. +-.....+ ...
T Consensus 94 ~~~~~F~~fF~~f~~vlyP~~~~lhp~~-~~~-----~~~~~~~~~~~-~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW 166 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVLYPNRDILHPDA-FAD-----KLLAILPPGFK-GFIAMFRNWTFSLFYVMAELWGSVVLSLLFW 166 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhcCCCH-HHH-----HhhhhccchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777766666654221 0111110 000 00000000000 00000 111111 11112222 347
Q ss_pred hhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 210 SFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 210 ~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
.+..|.++.++ -.+.++++..+.|+|..++..+..++.+
T Consensus 167 ~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 167 GFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999888 7889999999999999999988888776
No 272
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.04 E-value=39 Score=36.45 Aligned_cols=166 Identities=10% Similarity=-0.005 Sum_probs=101.6
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC---hHHHHHHHHHHHH-HHHHHHhHHHHHhhhccchHHHHH
Q 009195 65 TGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKS---FADSSNAVNNFLG-ISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~---~~~~~~~~~~~~~-~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
+..++.++.+.+..++-.+.++.+. -+.+.+.++ +.....+-....+ .+.+..++-+++.+++ -|.+++.
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~ 96 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFY 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHH
Confidence 3456677777777777666654332 245555444 4445566666665 6777788889999987 9999988
Q ss_pred HHHHHHHHHHHHHHHhhhccccCCCCCcccccccccC-----CCCCc-c---------chhHHHHHHHHHHHHHhhcc-c
Q 009195 141 IFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLG-----SCEPA-K---------SWQMLYLYTVLYITGFGAAG-I 204 (540)
Q Consensus 141 i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~---------~~~~~~~~~~~~l~g~g~g~-~ 204 (540)
+....+....+++++... |. |+..|.+.. ....| . .+....+++ .+=-+|. .
T Consensus 97 ~~~~~F~~fF~LFa~Vi~-----P~---~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi----~aELWgslV 164 (509)
T COG3202 97 IILGFFLGFFALFAFVIY-----PY---KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYI----MAELWGSLV 164 (509)
T ss_pred HHHHHHHHHHHHHHHHHh-----cc---ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHH----HHHHHHHHH
Confidence 888888777777776633 21 111111100 01111 1 011222222 1111111 1
Q ss_pred c-hhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 009195 205 R-PCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQM 254 (540)
Q Consensus 205 ~-~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~ 254 (540)
. -....+..|++..++ -.|++++++++.|++..++..+..++.+
T Consensus 165 ~S~lFw~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 165 LSLLFWQFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 133567788888877 7899999999999999999999888866
No 273
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=85.45 E-value=8.7 Score=38.11 Aligned_cols=140 Identities=12% Similarity=0.094 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhccchHH---HHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCcc
Q 009195 107 SSNAVNNFLGISQASSVLGGFLADAYLGRYW---TIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAK 183 (540)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~---~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (540)
-+.+.+.++++.++|+-+...+..|- |.+ .+.+..++.++... +...++ ...|.
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s--~~~ve~ymqivf~vs~a~l~-Lpilt~--~vsP~------------------ 340 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS--SPKVESYMQIVFLVSIAALL-LPILTS--SVSPS------------------ 340 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC--CcccchHHHHHHHHHHHHHH-HHHHHh--ccCCC------------------
Confidence 37788888888887776666665542 322 23333332222222 222111 01111
Q ss_pred chhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHH
Q 009195 184 SWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFG 263 (540)
Q Consensus 184 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~ 263 (540)
+.+...-+++..+.-.+.|.++|.+.-+=.+..|++. |.+.+++|....|+..-++-...---....+-|..|.
T Consensus 341 kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~ 414 (454)
T KOG4332|consen 341 KESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFG 414 (454)
T ss_pred cCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhh
Confidence 1333334556666777888999999988888889888 9999999988877654433111000001234677888
Q ss_pred HHHHHHHHHHHH
Q 009195 264 ALAIAMGISNML 275 (540)
Q Consensus 264 i~~i~~~~~~~~ 275 (540)
++.+...++.+.
T Consensus 415 icS~~~~~a~i~ 426 (454)
T KOG4332|consen 415 ICSAFLFVASIL 426 (454)
T ss_pred hhHHHHHHHHHH
Confidence 888777666554
No 274
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=79.27 E-value=4.2 Score=43.23 Aligned_cols=91 Identities=9% Similarity=-0.163 Sum_probs=58.0
Q ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCh----------------HHHHHHHHHHHHHHHHHHhHH
Q 009195 63 SKTGGWIAALFIFGNEMAERMAYFGLSVNMVTFMFYV-MHKSF----------------ADSSNAVNNFLGISQASSVLG 125 (540)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~-lg~~~----------------~~~~~~~~~~~~~~~~~~~~~ 125 (540)
..+..+|..+.++..+++..++.+...-+.+.++-++ ++=++ ....+-..+......+.+++-
T Consensus 273 ~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~ 352 (498)
T KOG0637|consen 273 ALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLV 352 (498)
T ss_pred hHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 4566777888999999999999887777777777553 22111 011245555666667778888
Q ss_pred HHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 009195 126 GFLADAYLGRYWTIAIFTTIYLAGLTGIT 154 (540)
Q Consensus 126 G~lsD~~~GR~~~i~i~~~l~~i~~~~~~ 154 (540)
-+++||+ |-|+.+..+...+.++..+..
T Consensus 353 ~~l~~~~-g~r~~y~~~~~~f~~~~~~~g 380 (498)
T KOG0637|consen 353 EKLSRKF-GTRKRYWGGVNAFGLATGLAG 380 (498)
T ss_pred HHHHHhc-CcceEEeehhHHHHHHHHHHh
Confidence 9999998 844444444433444444333
No 275
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=75.33 E-value=1.3e+02 Score=32.77 Aligned_cols=32 Identities=28% Similarity=0.409 Sum_probs=30.2
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILNSIIK 468 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~ 468 (540)
+|++.|++++|++.....+|.++++.+.+.+.
T Consensus 143 fP~kER~ratsi~~sg~~vG~~Ia~~L~qll~ 174 (511)
T TIGR00806 143 VPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV 174 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999843
No 276
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=69.68 E-value=15 Score=38.07 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=48.3
Q ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccccCCCCCCCCCcccCCCcCcchhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009195 439 DAMKSIGSAYAALAGGLGCFAASILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKY 518 (540)
Q Consensus 439 ~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~~~~~~~i~~~~~~~~~~~ 518 (540)
++.|..+-.+++....+|++++..+.+++.+..| +...|++.++..+++++.++...++++.
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~------------------~~~~f~i~~~~~~~~~~~f~~~~~~y~~ 128 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG------------------WFLGFGIPAIGMLLALIVFLSGRKRYRK 128 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-------------------HHHHHHHHHHHHHHHHHHHHCCCCTT--
T ss_pred hhhhhhhHHHHHHHHhhhhHhhcccchhhccccc------------------hhhhhhHHHHHHHHHHHHHHhCCcCCcC
Confidence 4577888889999999999999999999886433 4567888888888888877777777766
Q ss_pred c
Q 009195 519 R 519 (540)
Q Consensus 519 ~ 519 (540)
+
T Consensus 129 ~ 129 (372)
T PF00854_consen 129 V 129 (372)
T ss_dssp S
T ss_pred c
Confidence 5
No 277
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=66.61 E-value=2 Score=43.60 Aligned_cols=55 Identities=5% Similarity=0.133 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHH
Q 009195 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFT 247 (540)
Q Consensus 187 ~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~ 247 (540)
-..+++..++.|+..|-.......+.++..++++ |..+-.+..+..++|-.+|..
T Consensus 248 d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 248 DAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp -------------------HHHH--------------------------------------
T ss_pred hHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788999999998899999999998666 555544444455555555543
No 278
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.80 E-value=41 Score=28.29 Aligned_cols=23 Identities=22% Similarity=0.091 Sum_probs=17.4
Q ss_pred hHHHHHhhhccchHHHHHHHHHH
Q 009195 123 VLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 123 ~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
.+.||+-|||+|-++.-+|..++
T Consensus 60 a~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHH
Confidence 45689999999988876665443
No 279
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=57.16 E-value=54 Score=32.20 Aligned_cols=31 Identities=13% Similarity=-0.059 Sum_probs=26.1
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhc
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILNSIIK 468 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~ 468 (540)
+|. .||++.|+...+.++++.+-+.+...+.
T Consensus 125 FP~-~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 125 FPR-SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred Ccc-ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 986 7999999999999999988777765544
No 280
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=56.00 E-value=3e+02 Score=29.95 Aligned_cols=71 Identities=17% Similarity=0.161 Sum_probs=49.9
Q ss_pred HHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 196 ITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGI 271 (540)
Q Consensus 196 l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~ 271 (540)
..|+..-......-..+.+++|+..+ +...++-++...++-..+-.++++.+.+..||+.+..+.-+.+++
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~-----ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~li 361 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPND-----YSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILI 361 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHH
Confidence 35555555566666777888887653 777888877666666666667888999999999887765444433
No 281
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=53.64 E-value=3.3e+02 Score=29.78 Aligned_cols=57 Identities=12% Similarity=0.141 Sum_probs=43.1
Q ss_pred HHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhcc
Q 009195 194 LYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (540)
Q Consensus 194 ~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~ 256 (540)
-++..+........+.++-+...++.. -|+.+.+.+...|+|+-.-..+.-++.+..
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 345556666777888999999999999 899999999999998865555555555543
No 282
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=52.82 E-value=3.2e+02 Score=29.24 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHhhcccchhhhhhhhccCCCC
Q 009195 186 QMLYLYTVLYITGFGAAGIRPCVSSFGADQFDER 219 (540)
Q Consensus 186 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~ 219 (540)
.....++..++.|++.+..+....++.+ .+|++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 4555566667889998888888887776 56643
No 283
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=52.28 E-value=3.1e+02 Score=28.95 Aligned_cols=28 Identities=11% Similarity=0.045 Sum_probs=23.2
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHH
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILN 464 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~ 464 (540)
.|.+.|..+.|+....+..-..+--.++
T Consensus 415 VpEseR~vv~gvqnsL~~~ldll~~ilv 442 (503)
T KOG2601|consen 415 VPESERCVVFGVQNSLNSALDLLKDILV 442 (503)
T ss_pred cchhhhhhhHhHHHHHHHHHHHHHHhEE
Confidence 9999999999999988887776665443
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=51.92 E-value=2.3e+02 Score=30.03 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Q 009195 107 SSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTT 144 (540)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~ 144 (540)
-|.+-.+..+.+.++.+..|++..++ .+..-+.++.+
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w-~~~~~l~l~~~ 323 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNW-DRWGELALGVF 323 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcch-HHHHHHHHHHH
Confidence 36677777777888888889986654 66554444443
No 285
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=51.79 E-value=57 Score=25.66 Aligned_cols=50 Identities=16% Similarity=0.317 Sum_probs=27.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhccccc
Q 009195 232 NFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFIGTPLYR 284 (540)
Q Consensus 232 ~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~~~~~~~ 284 (540)
.+++....++++++ ++.||+.++ .+..+++.++..++++++..--.+.++
T Consensus 11 ~l~~~il~~~~iis-fi~Gy~~q~--~~~~~~~~~~g~~~~~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 11 KLMQYILIISAIIS-FIVGYITQS--FSYTFYIYGAGVVLTLLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHhheeCCcHhhc
Confidence 34455556666665 566677665 455666655555555554433333333
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=50.80 E-value=31 Score=36.31 Aligned_cols=93 Identities=12% Similarity=0.053 Sum_probs=55.5
Q ss_pred HHHHHHHH-HHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccc
Q 009195 106 DSSNAVNN-FLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKS 184 (540)
Q Consensus 106 ~~~~~~~~-~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (540)
-......+ +.+...+|.+...++-+. +||+..+... +-.+...+..++...+ .+ ..=
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v~-lR~lfiPlF~~cn~~~--~~-----------------v~~ 340 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPVL-LRLLFIPLFLLCNYPP--LP-----------------VVF 340 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHHH-HHHHHHHHHHHhccCC--CC-----------------cee
Confidence 33444444 788888887777777663 5555544333 3333333333221100 00 011
Q ss_pred hhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 185 WQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 185 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
.+-++++....+.|+..|=...+...+.++..|+++
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 234566777789999999888899999999988766
No 287
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=48.10 E-value=3.6e+02 Score=28.53 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 187 ~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
....++...+.+++.|..+....+..++ +|.+.
T Consensus 117 f~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~y 149 (406)
T KOG1479|consen 117 FLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEY 149 (406)
T ss_pred HHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHH
Confidence 3444555677888888888777777666 45444
No 288
>PHA03049 IMV membrane protein; Provisional
Probab=47.91 E-value=28 Score=26.36 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccccccCCCchhhhhh
Q 009195 495 YWLLAVLSVINFCAFLYSAYRYKYRSEQKHGNDYEVMEN 533 (540)
Q Consensus 495 f~~~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (540)
.++..|++++++++|-+..+++...+.+...+.++.++|
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~ 44 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMED 44 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCCChhhccCchh
Confidence 445556777777777666555555444433444455554
No 289
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=43.77 E-value=1.2e+02 Score=21.84 Aligned_cols=32 Identities=9% Similarity=0.176 Sum_probs=20.5
Q ss_pred HHHHHHHHHhHHHHHhhhccchHHHHHHHHHH
Q 009195 114 FLGISQASSVLGGFLADAYLGRYWTIAIFTTI 145 (540)
Q Consensus 114 ~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l 145 (540)
...+..+...+.|+..|+.+|.++...+..++
T Consensus 9 ~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 9 TMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 33444555567788899888986665554433
No 290
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=42.36 E-value=69 Score=28.88 Aligned_cols=31 Identities=6% Similarity=0.078 Sum_probs=22.8
Q ss_pred hhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHH
Q 009195 207 CVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAI 243 (540)
Q Consensus 207 ~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~ 243 (540)
..+..++-..+++. -|+.++|-.+-.|++-+
T Consensus 114 isYGilSaSWD~~r------~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 114 ISYGILSASWDPER------EGSLLGWEEFKRNWGRM 144 (153)
T ss_pred hhhhhcccccCCCC------CCCcccHHHHHHhHHHH
Confidence 34555666777777 78999998888887654
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=41.98 E-value=63 Score=35.90 Aligned_cols=67 Identities=19% Similarity=0.172 Sum_probs=55.3
Q ss_pred chhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhcc
Q 009195 184 SWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEH 256 (540)
Q Consensus 184 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~ 256 (540)
+-+..+.+.=.+++|++.........-+.=+++|++- |..+.+++.+...+|..++.++...+....
T Consensus 455 ~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sM------kS~~~al~l~t~a~G~~lss~Lv~~v~~~t 521 (571)
T KOG1237|consen 455 PMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESM------KSVATALWLLTVAVGNYLSSVLVSLVQFST 521 (571)
T ss_pred CeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456677777789999998888888888889999888 999999999999999999988886655444
No 292
>PRK10263 DNA translocase FtsK; Provisional
Probab=41.13 E-value=2.5e+02 Score=34.25 Aligned_cols=18 Identities=17% Similarity=0.085 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHhhhccch
Q 009195 241 GAIVAFTLVVYIQMEHGW 258 (540)
Q Consensus 241 g~~i~p~i~~~l~~~~gw 258 (540)
|+++|..+...+...+|.
T Consensus 143 GGIIG~lLs~lL~~LfG~ 160 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHS 160 (1355)
T ss_pred cchHHHHHHHHHHHHHhH
Confidence 555555555555444443
No 293
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.24 E-value=27 Score=35.58 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHh--ccchhHHHHHHHHHHHhhHHHHHHHHHH
Q 009195 422 VGIGLAVSILSVIWA--APDAMKSIGSAYAALAGGLGCFAASILN 464 (540)
Q Consensus 422 ~~~g~~~~~~~~~~~--~P~~~rg~~~g~~~~~~~~~~~~~~~l~ 464 (540)
+++++++.++++++. .|..||= |+++.+.+.|+|++.+++
T Consensus 193 l~~~fvl~tlaivLFPLWP~~mR~---gvyY~sig~~gfl~~Ilv 234 (372)
T KOG2927|consen 193 LGVLFVLVTLAIVLFPLWPRRMRQ---GVYYLSIGAGGFLAFILV 234 (372)
T ss_pred HHHHHHHHHHHHHhcccCcHHHhc---ceeeeecchhHHHHHHHH
Confidence 455555555555544 8888884 444444455555554443
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=40.11 E-value=3.6e+02 Score=26.76 Aligned_cols=33 Identities=12% Similarity=-0.128 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHH
Q 009195 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIA 140 (540)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~ 140 (540)
.....++..+..+|+..-|..+-.-+-||+-+.
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 455566777777888888888776556776555
No 295
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=37.52 E-value=37 Score=29.36 Aligned_cols=25 Identities=12% Similarity=-0.067 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccc
Q 009195 494 LYWLLAVLSVINFCAFLYSAYRYKY 518 (540)
Q Consensus 494 ~f~~~a~~~~~~~i~~~~~~~~~~~ 518 (540)
+|.++|++..+.++++|++.|+.|+
T Consensus 70 i~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 70 IFGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4555555544444444444444444
No 296
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=37.17 E-value=3.9e+02 Score=30.62 Aligned_cols=28 Identities=14% Similarity=0.159 Sum_probs=20.1
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 129 ADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 129 sD~~~GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
-|++-||.+-++++.+++.++.+...+.
T Consensus 50 d~~~~~R~~~l~~t~~~f~i~sl~v~ll 77 (704)
T TIGR01666 50 DDRLTGRLKNVIFTLICFSIASFSVELL 77 (704)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445578888888888888877766554
No 297
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=35.13 E-value=3.6e+02 Score=28.95 Aligned_cols=121 Identities=15% Similarity=-0.019 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccc-hHHHHHHHHHHHHH
Q 009195 70 AALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLG-RYWTIAIFTTIYLA 148 (540)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~G-R~~~i~i~~~l~~i 148 (540)
....+.+..++..++. ....|.-.-..+|++.++...+++.-.+.+.++.++--..-- +.| |-++++.+.+.++.
T Consensus 17 ~~~~lglQH~lamfg~---~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~-~~g~~lP~~lG~sFafi~ 92 (451)
T COG2233 17 KLLLLGLQHLLAMFGA---TVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTG-PGGSGLPSYLGSSFAFVA 92 (451)
T ss_pred HHHHHHHHHHHHHHhc---chHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-CcccCCCeeEechHHHHH
Confidence 3444444444443333 233345566789999999999999999999999887766333 324 55566655554443
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
-++...-. . + ......+.+.+..|+..-...+.....+...||+-.
T Consensus 93 p~i~~~~~-~-----g--------------------~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvV 138 (451)
T COG2233 93 PMIAIGGT-T-----G--------------------DGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVV 138 (451)
T ss_pred HHHHHHhc-c-----C--------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 33322211 0 0 124445555555555554443333337778888877
No 298
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=34.74 E-value=2.5e+02 Score=32.13 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=21.2
Q ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHh
Q 009195 129 ADAYLGRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 129 sD~~~GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
-|++-||.+-++++.+++.++.+...+.
T Consensus 50 ~~~~~~R~~~l~it~~~f~i~sl~v~ll 77 (701)
T TIGR01667 50 DDRLTGRLKNLIITLSCFSIASFLVQLL 77 (701)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455578889999998888887777654
No 299
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=32.42 E-value=1.9e+02 Score=23.73 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=20.9
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhccchH
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWG 259 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~ 259 (540)
...+=-++.+...+|+++|. +-|+..+..+|.
T Consensus 21 QkkaEr~~q~ilti~aiVg~-i~Gf~~Qqls~t 52 (101)
T KOG4112|consen 21 QKKAERFQQLILTIGAIVGF-IYGFAQQQLSVT 52 (101)
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 44455567778888888885 445566666654
No 300
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=30.47 E-value=2.9e+02 Score=27.21 Aligned_cols=29 Identities=17% Similarity=0.102 Sum_probs=22.2
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHHh
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILNS 465 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~~ 465 (540)
+-+-+|..++|+.....+..+.+.....+
T Consensus 72 ~vpii~~iGLglg~liW~s~n~l~Gw~~g 100 (254)
T PF07857_consen 72 VVPIIKTIGLGLGMLIWGSVNCLTGWASG 100 (254)
T ss_pred ehhHhhhhhhHHHHHHHHHHHHHHHHHHh
Confidence 56668999999888888877776666654
No 301
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=29.72 E-value=25 Score=30.70 Aligned_cols=18 Identities=11% Similarity=0.008 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 009195 259 GSAFGALAIAMGISNMLF 276 (540)
Q Consensus 259 ~~~f~i~~i~~~~~~~~~ 276 (540)
||++++.+++.++.++++
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 355554444443333333
No 302
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=29.24 E-value=6.1e+02 Score=25.61 Aligned_cols=56 Identities=11% Similarity=-0.043 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhh--ccchHHHHHHHHHHHHH
Q 009195 87 GLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADA--YLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 87 ~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~--~~GR~~~i~i~~~l~~i 148 (540)
++.++-..-+.+..|+-....++.++..... ++..-.++ -||.+|.=+++.++-.+
T Consensus 42 g~~s~SlaLLADa~Hml~D~~al~lal~A~~------~a~r~~~~~~TfGy~R~eiLaa~~nav 99 (296)
T COG1230 42 GLLTGSLALLADALHMLSDALALLLALIAIK------LARRPATKRFTFGYKRLEILAAFLNAL 99 (296)
T ss_pred HHHhccHHHHHhHHHHHHHHHHHHHHHHHHH------HhcCCCCCCCCccHhHHHHHHHHHHHH
Confidence 3445555566777777655555444433322 22222333 14877765555544433
No 303
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=27.55 E-value=7.3e+02 Score=25.99 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=52.0
Q ss_pred hhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH----HHHH-HHhhhccccCCCCCcccccc
Q 009195 99 VMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAG----LTGI-TLCATMKVFMPNQDNCDRIS 173 (540)
Q Consensus 99 ~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~----~~~~-~~~~~~~~~~~~~~~~~~~~ 173 (540)
-+|-+..+.+.+++.+...+.+|+.+.=++.|.- ---+-+..=.++.++| .++. .++.. ..
T Consensus 37 LlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~-~~~~Fv~vElllgligg~Sa~~ly~~FA~~-----~~-------- 102 (508)
T COG4262 37 LLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDA-ALARFVDVELLLGLIGGVSAAALYLLFALE-----SA-------- 102 (508)
T ss_pred hcCCceeehHHHHHHHHHHhchhhhhhccccCch-HHHHHHHHHHHHHHhccchHHHHHHHHHhc-----cc--------
Confidence 3466667888899999998888887776665532 1111111111221111 1111 12210 00
Q ss_pred cccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhc
Q 009195 174 QLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGAD 214 (540)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d 214 (540)
.....++++-+++|.-.|+-.|....++-.
T Consensus 103 -----------~~~~Vly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 103 -----------PSRLVLYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred -----------hHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 234566777788999999988888877755
No 304
>PRK10692 hypothetical protein; Provisional
Probab=26.53 E-value=1.1e+02 Score=24.72 Aligned_cols=23 Identities=13% Similarity=0.005 Sum_probs=18.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 009195 134 GRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 134 GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
-||.+.+++.++..+|++.+...
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~g 24 (92)
T PRK10692 2 KRKNASLLGNVLMGLGLVVMVVG 24 (92)
T ss_pred cchhhHHHhhHHHHHHHHHHHHH
Confidence 47888888988888888877654
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=26.05 E-value=5.5e+02 Score=24.00 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=16.2
Q ss_pred HHHhHHHHHHHHHHHHhhhccchHHHHHHHHHH
Q 009195 236 LSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIA 268 (540)
Q Consensus 236 ~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~ 268 (540)
....++-.+|.++++++.+..+. +.++++++.
T Consensus 169 ~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 169 LLIILSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 33444445555566666666664 344444443
No 306
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=25.65 E-value=1.1e+02 Score=30.46 Aligned_cols=61 Identities=13% Similarity=0.046 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHH---------hhhccchHHHHH
Q 009195 78 EMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFL---------ADAYLGRYWTIA 140 (540)
Q Consensus 78 ~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~l---------sD~~~GR~~~i~ 140 (540)
.+.+-..-....+++..|+++ .|.++....++.....+.-++..++.|.. -||+ |||+...
T Consensus 26 HmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~wh 95 (412)
T KOG4830|consen 26 HMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSWH 95 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeeee
Confidence 444444444566888888875 56666666677777778888888888744 5787 9998754
No 307
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=25.49 E-value=1.3e+02 Score=23.05 Aligned_cols=24 Identities=4% Similarity=0.117 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccc
Q 009195 495 YWLLAVLSVINFCAFLYSAYRYKY 518 (540)
Q Consensus 495 f~~~a~~~~~~~i~~~~~~~~~~~ 518 (540)
.++..|++++++++|-+..+....
T Consensus 6 iLi~ICVaii~lIlY~iYnr~~~~ 29 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNRKKTT 29 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc
Confidence 344455666666665555444443
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.67 E-value=3.4e+02 Score=22.95 Aligned_cols=35 Identities=6% Similarity=-0.001 Sum_probs=28.3
Q ss_pred ccchhHHHHHHHHHHHhhHHHHHHHHHHhhhcccc
Q 009195 437 APDAMKSIGSAYAALAGGLGCFAASILNSIIKSVT 471 (540)
Q Consensus 437 ~P~~~rg~~~g~~~~~~~~~~~~~~~l~~~i~~~~ 471 (540)
...+.++.++++-...-.+++.+.....+++.+.+
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34568889999999888898888888888887753
No 309
>PHA02650 hypothetical protein; Provisional
Probab=24.48 E-value=1.4e+02 Score=23.51 Aligned_cols=32 Identities=16% Similarity=0.311 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q 009195 491 FDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQ 522 (540)
Q Consensus 491 ~~~~f~~~a~~~~~~~i~~~~~~~~~~~~~~~ 522 (540)
..|.++++..+.++.++++.++.-+..+|++.
T Consensus 47 ~~~~~~ii~i~~v~i~~l~~flYLK~~~r~~~ 78 (81)
T PHA02650 47 FNGQNFIFLIFSLIIVALFSFFVFKGYTRNLN 78 (81)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 45666666666666666666666555555543
No 310
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=23.60 E-value=2.8e+02 Score=23.08 Aligned_cols=16 Identities=19% Similarity=0.119 Sum_probs=9.3
Q ss_pred HhHHHHHhhhccchHH
Q 009195 122 SVLGGFLADAYLGRYW 137 (540)
Q Consensus 122 ~~~~G~lsD~~~GR~~ 137 (540)
..+.|..-|+.||-.+
T Consensus 59 G~~lG~WLD~~~~t~~ 74 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPF 74 (100)
T ss_pred HHHHHHHHHhhcCCCc
Confidence 3455666676666544
No 311
>COG4232 Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]
Probab=22.94 E-value=1.1e+03 Score=26.26 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 187 MLYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 187 ~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
...-....+.+|+|.|.+.-.+..+.....|+..
T Consensus 325 ~~~g~~~l~al~LGMg~Plllv~~f~~~~LPk~G 358 (569)
T COG4232 325 ALLGGLALYALGLGMGLPLLLIGVFGNRLLPKPG 358 (569)
T ss_pred HHHHHHHHHHHHHhcccchhhheecccccCCCCC
Confidence 3333445567889999888888777777777644
No 312
>PHA02844 putative transmembrane protein; Provisional
Probab=22.82 E-value=1.5e+02 Score=23.08 Aligned_cols=28 Identities=11% Similarity=0.159 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhcccc
Q 009195 491 FDYLYWLLAVLSVINFCAFLYSAYRYKY 518 (540)
Q Consensus 491 ~~~~f~~~a~~~~~~~i~~~~~~~~~~~ 518 (540)
..|.++++..+.++.++++.++.-+..+
T Consensus 46 ~~~~~~ii~i~~v~~~~~~~flYLK~~~ 73 (75)
T PHA02844 46 SSTKIWILTIIFVVFATFLTFLYLKAVP 73 (75)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHheec
Confidence 4556666666666666666555544433
No 313
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=21.69 E-value=4.9e+02 Score=27.70 Aligned_cols=59 Identities=8% Similarity=-0.021 Sum_probs=45.8
Q ss_pred HHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHHhhhccchH
Q 009195 195 YITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFFYLSVTVGAIVAFTLVVYIQMEHGWG 259 (540)
Q Consensus 195 ~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~ 259 (540)
.+.+...-.......++.+...+++. -|+.+++.+...|+|+-.-..+..++.+..++.
T Consensus 377 ~~~~~~~ts~fv~~maf~aqisdp~i------ggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~ 435 (510)
T KOG3574|consen 377 AFHQVFVTSMFVSGMAFHAQISDPAI------GGTYMTLLNTLSNLGGNWPGTVALWLADGLTVK 435 (510)
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCccc------CccHHHHHHHHHHhcCCcHHHHHHHhcccCcee
Confidence 34445555556677888999999998 899999999999999887777888887766554
No 314
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=21.49 E-value=1.3e+02 Score=24.13 Aligned_cols=23 Identities=9% Similarity=-0.061 Sum_probs=18.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 009195 134 GRYWTIAIFTTIYLAGLTGITLC 156 (540)
Q Consensus 134 GR~~~i~i~~~l~~i~~~~~~~~ 156 (540)
-||.+.+++.++..+|++.+...
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~g 24 (89)
T PF10762_consen 2 KRKNAFLLGNVLMGLGMVVMVGG 24 (89)
T ss_pred CchhhHHHhhHHHHHhHHHHHHh
Confidence 47888888888888888777654
No 315
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=20.10 E-value=1e+03 Score=25.00 Aligned_cols=86 Identities=7% Similarity=-0.036 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhH
Q 009195 108 SNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQM 187 (540)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (540)
|.+=.+..+.++++.+..|++--.+ -|..-++++..-...+-++...+.+ ++.
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~~t--------------------------~~I 326 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMAQT--------------------------QHI 326 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhhcc--------------------------cce
Confidence 3445556667777788888886655 5553333333222222222222211 456
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhccCCCCC
Q 009195 188 LYLYTVLYITGFGAAGIRPCVSSFGADQFDERS 220 (540)
Q Consensus 188 ~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~ 220 (540)
+..+++-++.+.-.....+....-+++-...+.
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~ 359 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIATFQIARNLSSEL 359 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh
Confidence 666666666655555555555555555555443
Done!