Query 009195
Match_columns 540
No_of_seqs 280 out of 2428
Neff 8.3
Searched_HMMs 13730
Date Mon Mar 25 20:58:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009195.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009195hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pw4a_ f.38.1.1 (A:) Glycerol 99.9 3.7E-23 2.7E-27 214.3 26.0 181 67-280 23-204 (447)
2 d1pv7a_ f.38.1.2 (A:) Lactose 99.8 4E-18 2.9E-22 172.0 24.6 180 69-278 7-186 (417)
3 d1pw4a_ f.38.1.1 (A:) Glycerol 99.4 6.6E-13 4.8E-17 136.0 16.6 182 67-278 247-429 (447)
4 d1pv7a_ f.38.1.2 (A:) Lactose 99.3 3.8E-12 2.7E-16 127.3 11.7 145 101-280 255-400 (417)
5 d1fftb2 f.17.2.1 (B:27-117) Cy 9.6 35 0.0026 24.7 0.4 27 494-520 21-47 (91)
6 d2iuba2 f.17.3.1 (A:286-349) M 6.9 1.1E+02 0.0081 20.0 2.1 19 494-512 42-60 (64)
7 d2oara1 f.16.1.1 (A:10-118) Ga 5.6 5.1E+02 0.037 18.7 7.4 7 458-464 29-35 (109)
8 d3b45a1 f.51.1.1 (A:91-270) Gl 5.1 4.5E+02 0.032 20.2 5.6 33 123-155 69-101 (180)
9 d1kqfb2 f.23.22.1 (B:246-290) 4.4 3.5E+02 0.025 16.4 3.0 23 501-523 18-40 (45)
10 d3b60a2 f.37.1.1 (A:10-328) Mu 4.4 6.7E+02 0.049 20.1 6.7 11 256-266 154-164 (319)
No 1
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.91 E-value=3.7e-23 Score=214.29 Aligned_cols=181 Identities=12% Similarity=0.040 Sum_probs=142.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+|..+..+++..+...+... ....+.++++ ++|++.++.+++.+.+.++..++.+++|+++||+ |||+++.++.++.
T Consensus 23 ~w~i~~~~~~~~~~~~~~~~-~~~~~~p~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~ 99 (447)
T d1pw4a_ 23 RWQIFLGIFFGYAAYYLVRK-NFALAMPYLV-EQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILA 99 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-SHHHHHHHTT-SSTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHH
Confidence 45444444444444433332 2334455665 5899999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.++.++++++.... .+...++++|++.|++.|...+....+++|.+|+++
T Consensus 100 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~------ 149 (447)
T d1pw4a_ 100 AAVMLFMGFVPWAT------------------------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------ 149 (447)
T ss_dssp HHHHHHHHHCHHHH------------------------SSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTH------
T ss_pred HHHHhhccccchhh------------------------hhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhc------
Confidence 99888887652210 245678899999999999999999999999999988
Q ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHHHHHHhc
Q 009195 227 LDRFFNFFYLSVTVGAIVAFTLVVYIQME-HGWGSAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 227 R~~~~~~~~~~~~lg~~i~p~i~~~l~~~-~gw~~~f~i~~i~~~~~~~~~~~~~ 280 (540)
|++.+++++.+.++|..++|.+++.+... .+|++.|++..+..++..++.+...
T Consensus 150 r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 204 (447)
T d1pw4a_ 150 RGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMM 204 (447)
T ss_dssp HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhc
Confidence 99999999999999999999988877654 4799998887777665555554443
No 2
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.79 E-value=4e-18 Score=172.01 Aligned_cols=180 Identities=12% Similarity=-0.092 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHH
Q 009195 69 IAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLA 148 (540)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i 148 (540)
|..|.+.+..++..++.....+.++.|+++++|++.++.+++.+++.++..++.+++|+++||+ |||++++++.++..+
T Consensus 7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~-grr~~l~~~~~~~~~ 85 (417)
T d1pv7a_ 7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKL-GLRKYLLWIITGMLV 85 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-TTCTHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4677777778888888877788899999999999999999999999999999999999999998 999999999988888
Q ss_pred HHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhh
Q 009195 149 GLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLD 228 (540)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~ 228 (540)
+.+++....... ......++.+.+.+.+.+...........+..+++. ..+.
T Consensus 86 ~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 137 (417)
T d1pv7a_ 86 MFAPFFIFIFGP------------------------LLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVS----RRSN 137 (417)
T ss_dssp THHHHHHHTHHH------------------------HHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHH----HHHS
T ss_pred HHHHHHHhhhhh------------------------hHHHHHHHHHHHhhhcccccccchhhcccccccchh----hhhH
Confidence 777776652100 111122333334344433333333333333222211 1244
Q ss_pred hHHHHHHHHHhHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 229 RFFNFFYLSVTVGAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 229 ~~~~~~~~~~~lg~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
...+........+..++|.+++++.+. +|+..+........+..++..+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 186 (417)
T d1pv7a_ 138 FEFGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFF 186 (417)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHH
Confidence 455556667778888899888888765 4555555444444333333333
No 3
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=99.43 E-value=6.6e-13 Score=135.99 Aligned_cols=182 Identities=15% Similarity=0.065 Sum_probs=139.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHH
Q 009195 67 GWIAALFIFGNEMAERMAYFGLSVNMVTFMFYVMHKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIY 146 (540)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~lg~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~ 146 (540)
+.+.++.+....++.....+++..+.+.|+.+.++++..+.+.......++..++.+++|+++||+ +|++.........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~ 325 (447)
T d1pw4a_ 247 PNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFM 325 (447)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-STTCHHHHHHHHH
T ss_pred cCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhc-cccccccccchhH
Confidence 345677777788888888888999999999999999999999999999999999999999999998 8765444433333
Q ss_pred HHHHHHHHHhhhccccCCCCCcccccccccCCCCCccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhh
Q 009195 147 LAGLTGITLCATMKVFMPNQDNCDRISQLLGSCEPAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTH 226 (540)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~ 226 (540)
.+..+...... ..+. .+.....+..++.|++.++..+....+..|.+|++.
T Consensus 326 ~~~~~~~~~~~----~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------ 376 (447)
T d1pw4a_ 326 TLVTIATIVYW----MNPA-------------------GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------ 376 (447)
T ss_dssp HHHHHHHHHTT----SCCT-------------------TCHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTH------
T ss_pred HHHHHHHHHHH----hccc-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------
Confidence 22222222210 0111 345666677778899988888899999999999988
Q ss_pred hhhHHHHHHHHHhH-HHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 227 LDRFFNFFYLSVTV-GAIVAFTLVVYIQMEHGWGSAFGALAIAMGISNMLFFI 278 (540)
Q Consensus 227 R~~~~~~~~~~~~l-g~~i~p~i~~~l~~~~gw~~~f~i~~i~~~~~~~~~~~ 278 (540)
|+++.++.+...++ |..++|.+.+++.+.+||+..|++.+++.+++.++++.
T Consensus 377 ~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 429 (447)
T d1pw4a_ 377 AGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIV 429 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999998877776 55678999999999999999998877766655554443
No 4
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}
Probab=99.30 E-value=3.8e-12 Score=127.31 Aligned_cols=145 Identities=10% Similarity=0.027 Sum_probs=120.8
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCcccccccccCCCC
Q 009195 101 HKSFADSSNAVNNFLGISQASSVLGGFLADAYLGRYWTIAIFTTIYLAGLTGITLCATMKVFMPNQDNCDRISQLLGSCE 180 (540)
Q Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (540)
+.+....+.......++..++..+.+++.||+ ||++++.++.++..++.+++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~------------------------ 309 (417)
T d1pv7a_ 255 EQGTRVFGYVTTMGELLNASIMFFAPLIINRI-GGKNALLLAGTIMSVRIIGSSFA------------------------ 309 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTC------------------------
T ss_pred ccchhhhcccccccccccccchhhhhhhhccc-ccccchhhhHHHHHHhhhccccc------------------------
Confidence 34455566777778888899999999999998 99999999998888887777664
Q ss_pred CccchhHHHHHHHHHHHHHhhcccchhhhhhhhccCCCCCchhhhhhhhHHHHH-HHHHhHHHHHHHHHHHHhhhccchH
Q 009195 181 PAKSWQMLYLYTVLYITGFGAAGIRPCVSSFGADQFDERSKDYKTHLDRFFNFF-YLSVTVGAIVAFTLVVYIQMEHGWG 259 (540)
Q Consensus 181 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~d~~~~~~~~~~~~R~~~~~~~-~~~~~lg~~i~p~i~~~l~~~~gw~ 259 (540)
.+...+++..++.|++.+...+...+++.|.+|++. |++.+++. .....+|..++|.+.|++.+.+||+
T Consensus 310 ----~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~~i~~~~~G~l~~~~g~~ 379 (417)
T d1pv7a_ 310 ----TSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRF------SATIYLVCFCFFKQLAMIFMSVLAGNMYESIGFQ 379 (417)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGG------HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCHH
T ss_pred ----cccchhhHHHHHHHHHHHHHHHHHHHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
Confidence 346677778889999999999999999999999998 99999984 5667799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 009195 260 SAFGALAIAMGISNMLFFIGT 280 (540)
Q Consensus 260 ~~f~i~~i~~~~~~~~~~~~~ 280 (540)
..|++.+++.++..++.++..
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~l 400 (417)
T d1pv7a_ 380 GAYLVLGLVALGFTLISVFTL 400 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999888777666665555543
No 5
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=9.65 E-value=35 Score=24.68 Aligned_cols=27 Identities=11% Similarity=0.240 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccccc
Q 009195 494 LYWLLAVLSVINFCAFLYSAYRYKYRS 520 (540)
Q Consensus 494 ~f~~~a~~~~~~~i~~~~~~~~~~~~~ 520 (540)
.+++.+++.++...+++++..|++++.
T Consensus 21 ~~~i~~iv~v~V~~~~~~~~~ryR~~~ 47 (91)
T d1fftb2 21 AFGLMLIVVIPAILMAVGFAWKYRASN 47 (91)
T ss_dssp HHHHTTTTTTHHHHHHHTTTTTTTTST
T ss_pred HHHHHHHHHHHHHHHHHhhheeeeccC
Confidence 344444444444444455555555543
No 6
>d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]}
Probab=6.95 E-value=1.1e+02 Score=20.03 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 009195 494 LYWLLAVLSVINFCAFLYS 512 (540)
Q Consensus 494 ~f~~~a~~~~~~~i~~~~~ 512 (540)
++++.++..+++++.++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~f 60 (64)
T d2iuba2 42 YPVVLAVMGVIAVIMVVYF 60 (64)
T ss_dssp CHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555544444444443
No 7
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=5.58 E-value=5.1e+02 Score=18.70 Aligned_cols=7 Identities=14% Similarity=0.506 Sum_probs=3.0
Q ss_pred HHHHHHH
Q 009195 458 FAASILN 464 (540)
Q Consensus 458 ~~~~~l~ 464 (540)
++.|.+.
T Consensus 29 iimPlIg 35 (109)
T d2oara1 29 IITPLIN 35 (109)
T ss_dssp HHHHHHH
T ss_pred hhcchHh
Confidence 4444443
No 8
>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}
Probab=5.15 E-value=4.5e+02 Score=20.25 Aligned_cols=33 Identities=18% Similarity=-0.148 Sum_probs=20.3
Q ss_pred hHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 009195 123 VLGGFLADAYLGRYWTIAIFTTIYLAGLTGITL 155 (540)
Q Consensus 123 ~~~G~lsD~~~GR~~~i~i~~~l~~i~~~~~~~ 155 (540)
...|..-+|.+|+++.+.+..+...++.+...+
T Consensus 69 ~~~G~~lE~~~G~~~~~~~~~~~~~~g~l~~~~ 101 (180)
T d3b45a1 69 WYLGGAVEKRLGSGKLIVITLISALLSGYVQQK 101 (180)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhheeeeeHHHHHHHHHHHH
Confidence 344655565569998877666655555554443
No 9
>d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}
Probab=4.36 E-value=3.5e+02 Score=16.45 Aligned_cols=23 Identities=17% Similarity=-0.093 Sum_probs=11.1
Q ss_pred HHHHHHHHHHhhhhccccccccc
Q 009195 501 LSVINFCAFLYSAYRYKYRSEQK 523 (540)
Q Consensus 501 ~~~~~~i~~~~~~~~~~~~~~~~ 523 (540)
..+.+.++.-++.+-+.++++.+
T Consensus 18 ~~~~~~~~~~~fHYv~vGPn~v~ 40 (45)
T d1kqfb2 18 AGFIATFAGLIFHYIGIGPNKEV 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHCCBCSC
T ss_pred HHHHHHHHHHHHhhheeCCCccc
Confidence 33333344445555556665543
No 10
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter MsbA, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=4.36 E-value=6.7e+02 Score=20.11 Aligned_cols=11 Identities=9% Similarity=0.232 Sum_probs=5.0
Q ss_pred cchHHHHHHHH
Q 009195 256 HGWGSAFGALA 266 (540)
Q Consensus 256 ~gw~~~f~i~~ 266 (540)
.+|..+..+..
T Consensus 154 ~~~~l~li~l~ 164 (319)
T d3b60a2 154 YSWQLSIILVV 164 (319)
T ss_dssp HTTTTHHHHHH
T ss_pred hhccchhhhhh
Confidence 34555444333
Done!