Query 009196
Match_columns 540
No_of_seqs 401 out of 2570
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 21:00:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 100.0 8.6E-56 2.9E-60 455.7 23.3 302 183-517 1-306 (318)
2 3b0p_A TRNA-dihydrouridine syn 100.0 1.6E-52 5.3E-57 437.4 28.7 300 185-517 2-314 (350)
3 2r14_A Morphinone reductase; H 100.0 3.3E-38 1.1E-42 332.4 22.8 246 173-424 10-347 (377)
4 1z41_A YQJM, probable NADH-dep 100.0 2.1E-37 7.2E-42 321.5 25.9 245 173-423 4-325 (338)
5 1vyr_A Pentaerythritol tetrani 100.0 1.6E-37 5.5E-42 325.8 24.7 245 173-424 4-342 (364)
6 1icp_A OPR1, 12-oxophytodienoa 100.0 1.1E-37 3.8E-42 328.3 18.5 245 173-424 15-349 (376)
7 2gou_A Oxidoreductase, FMN-bin 100.0 6E-37 2E-41 321.5 22.9 245 173-424 4-341 (365)
8 2hsa_B 12-oxophytodienoate red 100.0 3.6E-37 1.2E-41 327.0 21.4 245 173-424 17-367 (402)
9 3gr7_A NADPH dehydrogenase; fl 100.0 2.3E-35 8E-40 306.8 25.3 247 173-423 4-325 (340)
10 3l5a_A NADH/flavin oxidoreduct 100.0 1E-34 3.6E-39 309.5 21.1 245 173-423 26-364 (419)
11 3kru_A NADH:flavin oxidoreduct 100.0 2.1E-34 7.2E-39 299.9 22.3 242 173-419 3-321 (343)
12 3hgj_A Chromate reductase; TIM 100.0 1.2E-33 4E-38 294.7 25.4 243 174-422 4-335 (349)
13 4ab4_A Xenobiotic reductase B; 100.0 7.6E-34 2.6E-38 297.6 22.1 238 174-424 4-327 (362)
14 3gka_A N-ethylmaleimide reduct 100.0 9E-34 3.1E-38 297.0 22.0 240 172-424 10-335 (361)
15 1o94_A Tmadh, trimethylamine d 100.0 5.2E-34 1.8E-38 322.6 21.4 244 173-423 8-339 (729)
16 1ps9_A 2,4-dienoyl-COA reducta 100.0 7.8E-34 2.7E-38 317.8 21.5 245 173-423 4-328 (671)
17 3k30_A Histamine dehydrogenase 100.0 1.3E-33 4.3E-38 317.2 18.8 244 173-423 13-342 (690)
18 3l5l_A Xenobiotic reductase A; 100.0 9.2E-33 3.1E-37 289.5 22.0 247 173-423 3-343 (363)
19 1jub_A Dihydroorotate dehydrog 100.0 3.3E-32 1.1E-36 278.1 21.7 234 177-421 3-288 (311)
20 3tjl_A NADPH dehydrogenase; OL 100.0 4.6E-32 1.6E-36 287.4 17.8 248 173-424 13-365 (407)
21 2e6f_A Dihydroorotate dehydrog 100.0 2.4E-31 8.2E-36 272.1 21.6 234 177-421 5-290 (314)
22 3aty_A Tcoye, prostaglandin F2 100.0 3.9E-31 1.3E-35 278.7 22.4 244 173-424 6-355 (379)
23 1f76_A Dihydroorotate dehydrog 100.0 9.8E-31 3.4E-35 270.3 21.1 231 177-421 46-335 (336)
24 3oix_A Putative dihydroorotate 100.0 9.5E-30 3.2E-34 265.0 19.5 231 177-420 39-320 (345)
25 4ef8_A Dihydroorotate dehydrog 100.0 1.7E-29 5.8E-34 263.9 20.3 233 178-420 39-322 (354)
26 1ep3_A Dihydroorotate dehydrog 100.0 6.2E-30 2.1E-34 260.1 15.4 231 177-421 8-286 (311)
27 1tv5_A Dhodehase, dihydroorota 100.0 1.1E-28 3.8E-33 264.4 20.7 234 175-421 81-419 (443)
28 4a3u_A NCR, NADH\:flavin oxido 100.0 1.7E-28 5.9E-33 256.7 20.7 247 173-424 3-334 (358)
29 3zwt_A Dihydroorotate dehydrog 100.0 2.9E-28 1E-32 255.8 21.4 231 177-421 51-344 (367)
30 1gte_A Dihydropyrimidine dehyd 100.0 1.4E-27 5E-32 279.1 25.6 234 178-420 535-832 (1025)
31 3i65_A Dihydroorotate dehydrog 99.9 2.4E-27 8.1E-32 251.5 19.6 232 176-421 84-391 (415)
32 2nli_A Lactate oxidase; flavoe 99.9 3.1E-26 1.1E-30 240.5 20.8 252 178-459 72-357 (368)
33 4gbu_A NADPH dehydrogenase 1; 99.9 3.8E-26 1.3E-30 242.3 19.6 248 173-424 16-367 (400)
34 1p0k_A Isopentenyl-diphosphate 99.9 1E-24 3.6E-29 226.6 22.9 250 178-459 47-324 (349)
35 2nzl_A Hydroxyacid oxidase 1; 99.9 1.8E-24 6.2E-29 228.8 21.1 249 179-458 87-379 (392)
36 1gox_A (S)-2-hydroxy-acid oxid 99.9 3.7E-23 1.3E-27 217.2 22.0 251 178-460 63-354 (370)
37 1kbi_A Cytochrome B2, L-LCR; f 99.9 1.1E-23 3.6E-28 229.8 15.2 255 178-461 181-478 (511)
38 1vcf_A Isopentenyl-diphosphate 99.9 1.4E-21 4.7E-26 202.1 18.9 239 178-448 50-319 (332)
39 3tjx_A Dihydroorotate dehydrog 99.9 3.8E-21 1.3E-25 200.4 22.2 232 178-420 39-322 (354)
40 1p4c_A L(+)-mandelate dehydrog 99.8 3.3E-20 1.1E-24 195.5 17.7 248 178-460 64-352 (380)
41 3vkj_A Isopentenyl-diphosphate 99.8 2.6E-19 8.8E-24 188.0 18.0 249 179-458 52-338 (368)
42 2z6i_A Trans-2-enoyl-ACP reduc 99.8 1.1E-18 3.8E-23 180.3 18.7 191 183-415 9-201 (332)
43 1mzh_A Deoxyribose-phosphate a 99.8 1.1E-18 3.7E-23 171.5 10.6 193 189-419 11-214 (225)
44 3sr7_A Isopentenyl-diphosphate 99.7 5.8E-18 2E-22 177.4 14.4 243 179-448 79-342 (365)
45 1ypf_A GMP reductase; GUAC, pu 99.7 7.2E-17 2.5E-21 167.2 19.1 195 179-411 39-245 (336)
46 1jvn_A Glutamine, bifunctional 99.7 8.6E-17 2.9E-21 177.1 11.9 206 208-420 291-541 (555)
47 3sgz_A Hydroxyacid oxidase 2; 99.7 1.5E-15 5.1E-20 158.3 20.5 253 179-461 62-347 (352)
48 3bo9_A Putative nitroalkan dio 99.7 2.2E-15 7.4E-20 155.5 19.7 191 182-414 22-214 (326)
49 2agk_A 1-(5-phosphoribosyl)-5- 99.7 3.9E-17 1.3E-21 163.8 5.6 189 202-420 43-254 (260)
50 2y88_A Phosphoribosyl isomeras 99.7 7.9E-16 2.7E-20 150.9 14.6 156 241-420 74-240 (244)
51 3bw2_A 2-nitropropane dioxygen 99.6 6.9E-15 2.4E-19 153.9 20.3 190 186-415 10-247 (369)
52 2gjl_A Hypothetical protein PA 99.6 6.2E-15 2.1E-19 151.7 19.0 189 183-413 12-209 (328)
53 1eep_A Inosine 5'-monophosphat 99.6 1.1E-14 3.7E-19 154.2 20.4 205 182-415 38-295 (404)
54 1vzw_A Phosphoribosyl isomeras 99.5 8.7E-14 3E-18 136.6 16.2 157 241-420 75-237 (244)
55 3khj_A Inosine-5-monophosphate 99.5 8.3E-14 2.8E-18 145.9 16.8 199 182-418 41-249 (361)
56 1qo2_A Molecule: N-((5-phospho 99.5 1.2E-13 4.2E-18 135.6 16.4 187 205-420 38-238 (241)
57 3r2g_A Inosine 5'-monophosphat 99.5 5.7E-14 1.9E-18 146.9 13.6 195 180-414 36-237 (361)
58 2yzr_A Pyridoxal biosynthesis 99.5 2.5E-14 8.4E-19 146.8 10.2 146 257-414 27-280 (330)
59 3tdn_A FLR symmetric alpha-bet 99.5 2E-14 6.7E-19 141.9 8.1 153 241-420 79-244 (247)
60 1h5y_A HISF; histidine biosynt 99.5 5.3E-13 1.8E-17 129.9 18.0 192 202-420 38-242 (253)
61 1thf_D HISF protein; thermophI 99.5 2.5E-12 8.7E-17 126.5 18.7 189 204-420 37-239 (253)
62 2qr6_A IMP dehydrogenase/GMP r 99.4 1.7E-12 5.8E-17 136.8 17.2 208 180-413 61-314 (393)
63 1ka9_F Imidazole glycerol phos 99.4 1.6E-12 5.4E-17 127.9 14.0 155 241-420 75-240 (252)
64 2w6r_A Imidazole glycerol phos 99.4 3.3E-12 1.1E-16 126.7 15.0 190 204-420 37-244 (266)
65 4fo4_A Inosine 5'-monophosphat 99.4 3.9E-12 1.3E-16 133.4 13.2 201 182-417 42-252 (366)
66 2qjg_A Putative aldolase MJ040 99.3 8.7E-12 3E-16 124.4 13.8 200 184-420 31-252 (273)
67 3o07_A Pyridoxine biosynthesis 99.3 8.4E-12 2.9E-16 125.1 13.1 140 258-415 22-239 (291)
68 3ffs_A Inosine-5-monophosphate 99.3 7.9E-11 2.7E-15 124.7 18.7 133 258-416 147-286 (400)
69 3tdn_A FLR symmetric alpha-bet 99.2 1.8E-11 6.3E-16 120.6 9.9 103 314-421 22-124 (247)
70 2nv1_A Pyridoxal biosynthesis 99.2 4E-11 1.4E-15 122.3 12.3 144 258-413 32-246 (305)
71 2pgw_A Muconate cycloisomerase 99.2 1.8E-10 6.3E-15 120.8 17.2 148 243-420 138-286 (384)
72 2c6q_A GMP reductase 2; TIM ba 99.2 1.8E-10 6.1E-15 120.1 16.9 209 170-412 41-259 (351)
73 1jcn_A Inosine monophosphate d 99.2 7E-10 2.4E-14 120.8 19.1 138 250-416 251-398 (514)
74 1y0e_A Putative N-acetylmannos 99.1 2.3E-10 8E-15 110.5 12.7 159 243-416 8-214 (223)
75 4avf_A Inosine-5'-monophosphat 99.1 1E-09 3.5E-14 119.1 18.1 141 245-413 221-369 (490)
76 4fxs_A Inosine-5'-monophosphat 99.1 2.3E-10 7.8E-15 124.4 12.0 136 250-412 227-370 (496)
77 1qo2_A Molecule: N-((5-phospho 99.1 1.7E-10 5.8E-15 113.1 7.8 99 314-418 13-115 (241)
78 1mdl_A Mandelate racemase; iso 99.0 1.7E-09 5.8E-14 112.3 14.9 148 243-419 135-284 (359)
79 1xg4_A Probable methylisocitra 99.0 2E-09 7E-14 109.7 13.7 203 188-409 17-239 (295)
80 2ovl_A Putative racemase; stru 99.0 2E-09 7E-14 112.3 13.6 140 252-420 146-287 (371)
81 3q58_A N-acetylmannosamine-6-p 99.0 1.4E-09 4.6E-14 107.1 10.7 121 266-417 99-221 (229)
82 2rdx_A Mandelate racemase/muco 99.0 2.8E-09 9.7E-14 111.5 13.3 144 243-419 136-281 (379)
83 1yxy_A Putative N-acetylmannos 99.0 2.8E-09 9.4E-14 103.9 11.5 100 298-413 119-222 (234)
84 3igs_A N-acetylmannosamine-6-p 99.0 2.9E-09 9.8E-14 104.9 11.3 119 266-415 99-219 (232)
85 2nql_A AGR_PAT_674P, isomerase 98.9 6E-09 2.1E-13 109.5 14.1 146 243-419 154-302 (388)
86 1vrd_A Inosine-5'-monophosphat 98.9 6.6E-09 2.3E-13 112.4 13.9 137 255-417 237-381 (494)
87 2qdd_A Mandelate racemase/muco 98.9 6.5E-09 2.2E-13 108.8 13.4 146 242-420 135-282 (378)
88 1xm3_A Thiazole biosynthesis p 98.9 4.6E-08 1.6E-12 97.9 19.0 209 177-413 3-215 (264)
89 3eez_A Putative mandelate race 98.9 6.8E-09 2.3E-13 109.0 13.4 148 240-420 133-282 (378)
90 2p8b_A Mandelate racemase/muco 98.9 8.7E-09 3E-13 107.3 13.8 149 242-420 131-282 (369)
91 3usb_A Inosine-5'-monophosphat 98.9 2.8E-08 9.7E-13 108.4 16.2 134 253-413 255-396 (511)
92 2hzg_A Mandelate racemase/muco 98.9 2.9E-08 9.8E-13 104.7 15.4 154 242-420 134-292 (401)
93 1rvk_A Isomerase/lactonizing e 98.8 6.2E-08 2.1E-12 101.3 17.7 146 251-419 148-296 (382)
94 1nu5_A Chloromuconate cycloiso 98.8 6.6E-08 2.3E-12 100.6 16.8 146 246-419 136-283 (370)
95 1tkk_A Similar to chloromucona 98.8 8E-08 2.7E-12 99.9 15.6 147 243-418 131-281 (366)
96 2ps2_A Putative mandelate race 98.8 7.5E-08 2.6E-12 100.4 15.3 146 241-419 135-283 (371)
97 4gj1_A 1-(5-phosphoribosyl)-5- 98.8 2E-07 6.7E-12 92.3 17.0 189 207-419 41-238 (243)
98 3ozy_A Putative mandelate race 98.8 1.2E-07 4E-12 99.9 16.1 147 242-418 139-290 (389)
99 2qgy_A Enolase from the enviro 98.7 9E-08 3.1E-12 100.7 14.6 141 250-419 147-289 (391)
100 1wv2_A Thiazole moeity, thiazo 98.7 1.3E-06 4.6E-11 87.0 21.0 207 177-410 10-221 (265)
101 3cwo_X Beta/alpha-barrel prote 98.7 5.4E-07 1.8E-11 85.5 17.6 193 200-420 16-218 (237)
102 2gl5_A Putative dehydratase pr 98.7 1.6E-07 5.5E-12 99.1 15.2 140 252-405 150-299 (410)
103 1thf_D HISF protein; thermophI 98.7 3.4E-08 1.2E-12 96.9 8.2 90 327-421 30-119 (253)
104 2zbt_A Pyridoxal biosynthesis 98.7 2.5E-07 8.7E-12 93.5 14.6 154 241-412 21-245 (297)
105 2poz_A Putative dehydratase; o 98.6 1E-07 3.4E-12 100.2 11.6 141 250-404 135-279 (392)
106 1wa3_A 2-keto-3-deoxy-6-phosph 98.6 1.8E-07 6.3E-12 89.0 12.4 139 242-410 10-183 (205)
107 1geq_A Tryptophan synthase alp 98.6 5.8E-07 2E-11 88.1 16.0 160 241-411 4-226 (248)
108 1ka9_F Imidazole glycerol phos 98.6 5.2E-08 1.8E-12 95.6 7.7 91 326-421 30-120 (252)
109 2ox4_A Putative mandelate race 98.6 3.2E-07 1.1E-11 96.7 13.8 141 252-409 146-294 (403)
110 2oz8_A MLL7089 protein; struct 98.6 1.5E-06 5E-11 91.4 18.4 125 252-405 145-273 (389)
111 2og9_A Mandelate racemase/muco 98.6 4.2E-07 1.4E-11 95.6 14.2 131 252-411 162-294 (393)
112 2pp0_A L-talarate/galactarate 98.5 8.4E-07 2.9E-11 93.5 14.8 130 252-410 175-306 (398)
113 1h5y_A HISF; histidine biosynt 98.5 1.6E-07 5.5E-12 91.0 8.3 90 327-421 33-122 (253)
114 2qq6_A Mandelate racemase/muco 98.5 9.7E-07 3.3E-11 93.3 14.9 135 252-405 149-291 (410)
115 3rcy_A Mandelate racemase/muco 98.5 1.5E-06 5.1E-11 92.9 16.3 153 251-420 145-299 (433)
116 2o56_A Putative mandelate race 98.5 1E-06 3.6E-11 92.8 14.8 137 252-405 152-296 (407)
117 2qde_A Mandelate racemase/muco 98.5 6.4E-07 2.2E-11 94.3 13.1 139 243-411 136-276 (397)
118 2y88_A Phosphoribosyl isomeras 98.5 3.1E-07 1E-11 89.6 9.3 87 328-420 32-118 (244)
119 1rd5_A Tryptophan synthase alp 98.5 2.2E-06 7.7E-11 85.0 15.6 157 241-409 17-234 (262)
120 3stp_A Galactonate dehydratase 98.5 1.6E-06 5.5E-11 92.1 15.4 153 242-417 168-323 (412)
121 2gdq_A YITF; mandelate racemas 98.5 1.1E-06 3.7E-11 92.1 13.0 125 251-404 135-265 (382)
122 1tzz_A Hypothetical protein L1 98.4 1.2E-06 4.2E-11 92.0 13.4 125 252-405 165-295 (392)
123 2uva_G Fatty acid synthase bet 98.4 4.2E-06 1.4E-10 103.8 19.6 194 186-413 582-803 (2060)
124 3ro6_B Putative chloromuconate 98.4 1.3E-06 4.4E-11 90.8 12.8 140 242-411 130-272 (356)
125 1qop_A Tryptophan synthase alp 98.4 4.5E-06 1.6E-10 83.5 16.3 158 241-410 16-239 (268)
126 2zad_A Muconate cycloisomerase 98.4 5.2E-06 1.8E-10 85.5 17.2 139 244-412 131-274 (345)
127 1vzw_A Phosphoribosyl isomeras 98.4 4.8E-07 1.6E-11 88.4 8.8 87 328-420 33-119 (244)
128 1ofd_A Ferredoxin-dependent gl 98.4 5.8E-06 2E-10 98.9 19.6 111 295-412 1011-1135(1520)
129 3bjs_A Mandelate racemase/muco 98.4 1.1E-06 3.9E-11 93.6 12.0 125 251-405 183-311 (428)
130 4af0_A Inosine-5'-monophosphat 98.4 3.7E-06 1.3E-10 91.4 15.9 131 251-408 278-416 (556)
131 3sjn_A Mandelate racemase/muco 98.4 1.3E-06 4.3E-11 91.5 11.9 127 253-405 147-275 (374)
132 4adt_A Pyridoxine biosynthetic 98.4 1.1E-05 3.8E-10 82.2 18.5 182 196-415 27-248 (297)
133 3i4k_A Muconate lactonizing en 98.4 5.7E-06 1.9E-10 86.8 16.6 148 243-418 139-288 (383)
134 3vnd_A TSA, tryptophan synthas 98.4 2.1E-06 7.3E-11 86.2 12.6 160 240-409 16-239 (267)
135 2w6r_A Imidazole glycerol phos 98.3 4.4E-07 1.5E-11 89.7 6.4 89 327-420 30-121 (266)
136 3rr1_A GALD, putative D-galact 98.3 4.4E-06 1.5E-10 88.5 14.3 145 241-406 114-260 (405)
137 3sbf_A Mandelate racemase / mu 98.3 3.4E-06 1.2E-10 89.1 13.1 165 241-419 122-296 (401)
138 3r4e_A Mandelate racemase/muco 98.3 2.7E-06 9.2E-11 90.4 12.3 156 241-410 132-306 (418)
139 4e5t_A Mandelate racemase / mu 98.3 3.7E-06 1.3E-10 88.9 13.3 145 251-413 150-297 (404)
140 4dwd_A Mandelate racemase/muco 98.3 1.2E-05 4.2E-10 84.7 17.1 142 242-407 126-273 (393)
141 3jva_A Dipeptide epimerase; en 98.3 8E-06 2.7E-10 84.8 15.0 144 245-418 132-277 (354)
142 2hxt_A L-fuconate dehydratase; 98.3 4.7E-06 1.6E-10 89.0 13.2 127 250-405 196-324 (441)
143 3f4w_A Putative hexulose 6 pho 98.3 1.7E-05 5.9E-10 75.5 15.8 156 232-418 44-200 (211)
144 1zfj_A Inosine monophosphate d 98.3 6.1E-06 2.1E-10 88.9 14.1 134 258-417 236-377 (491)
145 3qja_A IGPS, indole-3-glycerol 98.3 4E-05 1.4E-09 77.2 18.8 146 240-420 112-257 (272)
146 4e4u_A Mandalate racemase/muco 98.2 7.7E-06 2.6E-10 86.8 13.4 150 251-418 143-295 (412)
147 1yad_A Regulatory protein TENI 98.2 1.9E-05 6.6E-10 76.0 14.8 77 333-414 123-201 (221)
148 2ekc_A AQ_1548, tryptophan syn 98.2 9.9E-06 3.4E-10 80.8 12.7 159 242-411 17-240 (262)
149 2qr6_A IMP dehydrogenase/GMP r 98.2 4.6E-06 1.6E-10 87.7 10.4 119 272-408 122-242 (393)
150 3tsm_A IGPS, indole-3-glycerol 98.2 0.00016 5.3E-09 72.9 20.7 179 204-420 86-264 (272)
151 3tji_A Mandelate racemase/muco 98.2 1.1E-05 3.7E-10 85.9 13.0 164 242-419 144-317 (422)
152 3ddm_A Putative mandelate race 98.2 8.6E-06 2.9E-10 85.8 11.9 126 250-405 153-281 (392)
153 2v82_A 2-dehydro-3-deoxy-6-pho 98.2 7.4E-06 2.5E-10 78.4 10.4 152 240-411 5-182 (212)
154 3nav_A Tryptophan synthase alp 98.2 2.7E-05 9.1E-10 78.4 14.9 159 241-409 19-241 (271)
155 2htm_A Thiazole biosynthesis p 98.2 0.00011 3.9E-09 73.3 19.1 204 177-410 3-212 (268)
156 3q45_A Mandelate racemase/muco 98.2 2.4E-05 8.4E-10 81.5 15.0 135 243-407 131-267 (368)
157 3tj4_A Mandelate racemase; eno 98.1 2.8E-05 9.7E-10 81.2 15.1 124 252-404 151-277 (372)
158 3ugv_A Enolase; enzyme functio 98.1 3.2E-05 1.1E-09 81.4 15.0 138 243-409 159-304 (390)
159 1sjd_A N-acylamino acid racema 98.1 1.3E-05 4.3E-10 83.3 11.7 121 251-404 140-262 (368)
160 3dg3_A Muconate cycloisomerase 98.1 3.7E-05 1.3E-09 80.1 15.2 134 242-405 129-266 (367)
161 3gd6_A Muconate cycloisomerase 98.1 3.2E-05 1.1E-09 81.4 14.8 145 243-419 129-282 (391)
162 3toy_A Mandelate racemase/muco 98.1 5.7E-05 1.9E-09 79.3 16.3 135 242-405 157-294 (383)
163 1chr_A Chloromuconate cycloiso 98.1 7.3E-05 2.5E-09 77.9 16.6 135 243-406 133-270 (370)
164 3my9_A Muconate cycloisomerase 98.0 4.9E-05 1.7E-09 79.4 14.7 140 243-411 137-278 (377)
165 1me8_A Inosine-5'-monophosphat 98.0 2.6E-05 8.7E-10 84.8 12.9 124 260-410 247-386 (503)
166 1ea0_A Glutamate synthase [NAD 98.0 2E-05 6.9E-10 94.1 12.9 108 296-410 977-1098(1479)
167 3vcn_A Mannonate dehydratase; 98.0 4.5E-05 1.5E-09 81.2 14.4 152 242-410 140-313 (425)
168 3v3w_A Starvation sensing prot 98.0 6E-05 2.1E-09 80.2 15.2 153 242-411 139-313 (424)
169 1vc4_A Indole-3-glycerol phosp 98.0 0.00015 5.2E-09 72.1 16.9 179 202-420 70-251 (254)
170 3fv9_G Mandelate racemase/muco 98.0 7.8E-05 2.7E-09 78.3 15.3 145 240-412 133-280 (386)
171 1viz_A PCRB protein homolog; s 98.0 4.3E-05 1.5E-09 75.7 12.5 143 258-420 24-226 (240)
172 2yw3_A 4-hydroxy-2-oxoglutarat 98.0 2.4E-05 8.3E-10 75.5 10.1 145 242-410 13-184 (207)
173 1w8s_A FBP aldolase, fructose- 98.0 0.00023 7.7E-09 71.1 17.1 133 260-419 98-245 (263)
174 3ngj_A Deoxyribose-phosphate a 97.9 0.0001 3.4E-09 72.9 14.0 189 190-409 35-235 (239)
175 3ovp_A Ribulose-phosphate 3-ep 97.9 0.00011 3.6E-09 72.1 14.0 153 242-418 5-210 (228)
176 3r12_A Deoxyribose-phosphate a 97.9 0.00016 5.4E-09 72.3 15.3 191 190-409 51-251 (260)
177 1r0m_A N-acylamino acid racema 97.9 4E-05 1.4E-09 79.8 11.6 121 251-404 147-268 (375)
178 3go2_A Putative L-alanine-DL-g 97.9 6.6E-05 2.3E-09 79.4 13.4 140 251-406 142-293 (409)
179 3ndo_A Deoxyribose-phosphate a 97.9 0.00012 3.9E-09 72.2 14.1 188 191-409 22-225 (231)
180 3tcs_A Racemase, putative; PSI 97.9 0.00013 4.6E-09 76.7 15.5 145 252-418 146-293 (388)
181 3i6e_A Muconate cycloisomerase 97.9 0.00014 4.7E-09 76.4 15.2 140 243-411 139-279 (385)
182 1ujp_A Tryptophan synthase alp 97.9 6.1E-05 2.1E-09 75.7 12.0 157 242-411 16-235 (271)
183 3r0u_A Enzyme of enolase super 97.9 0.00019 6.5E-09 75.3 15.8 139 243-411 133-275 (379)
184 1rpx_A Protein (ribulose-phosp 97.9 0.00015 5.3E-09 70.1 14.0 154 243-419 12-221 (230)
185 2zc8_A N-acylamino acid racema 97.9 6.2E-05 2.1E-09 78.1 11.9 122 251-405 140-262 (369)
186 3t6c_A RSPA, putative MAND fam 97.9 0.00014 4.6E-09 77.9 14.4 164 242-419 145-335 (440)
187 1tqj_A Ribulose-phosphate 3-ep 97.9 8.4E-05 2.9E-09 72.7 11.6 154 244-420 7-216 (230)
188 3oa3_A Aldolase; structural ge 97.8 0.00038 1.3E-08 70.5 16.1 189 190-409 66-269 (288)
189 2p10_A MLL9387 protein; putati 97.8 0.00015 5.1E-09 73.1 12.8 160 241-412 94-266 (286)
190 3tha_A Tryptophan synthase alp 97.8 5.5E-05 1.9E-09 75.4 9.3 156 241-409 13-231 (252)
191 3inp_A D-ribulose-phosphate 3- 97.8 0.00023 8E-09 70.6 13.7 154 242-418 28-236 (246)
192 3p3b_A Mandelate racemase/muco 97.8 6.2E-05 2.1E-09 79.1 10.2 128 254-404 150-284 (392)
193 4e4f_A Mannonate dehydratase; 97.8 0.00014 4.9E-09 77.4 12.9 152 242-407 139-311 (426)
194 1ub3_A Aldolase protein; schif 97.8 0.00045 1.5E-08 67.5 15.3 189 190-409 11-211 (220)
195 2fli_A Ribulose-phosphate 3-ep 97.8 0.00019 6.4E-09 68.6 12.1 148 244-415 6-208 (220)
196 3dgb_A Muconate cycloisomerase 97.8 0.00036 1.2E-08 73.1 15.3 137 246-411 142-281 (382)
197 4e8g_A Enolase, mandelate race 97.7 0.0002 7E-09 75.3 13.1 137 243-411 155-294 (391)
198 3vk5_A MOEO5; TIM barrel, tran 97.7 9.5E-05 3.3E-09 74.6 10.0 85 330-422 189-275 (286)
199 1xi3_A Thiamine phosphate pyro 97.7 8.2E-05 2.8E-09 70.6 9.1 74 334-413 122-198 (215)
200 3mwc_A Mandelate racemase/muco 97.7 0.00018 6.2E-09 75.9 12.5 138 243-413 151-293 (400)
201 1i4n_A Indole-3-glycerol phosp 97.7 0.0012 4E-08 65.8 17.3 161 223-420 84-245 (251)
202 3mqt_A Mandelate racemase/muco 97.7 0.00025 8.4E-09 74.6 13.0 131 255-411 155-288 (394)
203 1h1y_A D-ribulose-5-phosphate 97.7 0.0017 5.9E-08 62.9 18.1 146 241-418 64-214 (228)
204 3mkc_A Racemase; metabolic pro 97.7 0.00032 1.1E-08 73.9 13.2 126 255-406 160-288 (394)
205 3w01_A Heptaprenylglyceryl pho 97.7 0.00036 1.2E-08 68.8 12.5 136 266-420 34-229 (235)
206 3fcp_A L-Ala-D/L-Glu epimerase 97.6 0.0013 4.6E-08 68.7 17.4 148 243-418 138-287 (381)
207 2tps_A Protein (thiamin phosph 97.6 0.00011 3.8E-09 70.4 8.3 76 333-413 129-208 (227)
208 4gj1_A 1-(5-phosphoribosyl)-5- 97.6 9.5E-05 3.3E-09 73.0 7.9 88 328-420 32-119 (243)
209 2f6u_A GGGPS, (S)-3-O-geranylg 97.6 0.00058 2E-08 67.3 13.2 137 258-414 24-227 (234)
210 3vzx_A Heptaprenylglyceryl pho 97.5 0.00039 1.3E-08 68.3 10.9 84 327-420 140-223 (228)
211 4a35_A Mitochondrial enolase s 97.5 0.0013 4.5E-08 70.3 15.2 127 250-406 199-330 (441)
212 2uv8_G Fatty acid synthase sub 97.5 0.0006 2.1E-08 84.6 14.0 194 186-412 589-809 (2051)
213 3ajx_A 3-hexulose-6-phosphate 97.5 0.004 1.4E-07 58.8 16.7 143 241-417 53-198 (207)
214 4hnl_A Mandelate racemase/muco 97.4 0.0014 4.7E-08 69.4 13.8 149 242-404 143-301 (421)
215 1to3_A Putative aldolase YIHT; 97.4 0.0041 1.4E-07 63.4 16.6 159 260-446 114-293 (304)
216 3ik4_A Mandelate racemase/muco 97.4 0.0025 8.5E-08 66.3 14.8 134 243-405 134-270 (365)
217 1pii_A N-(5'phosphoribosyl)ant 97.4 0.011 3.8E-07 63.4 20.1 161 223-420 91-251 (452)
218 3dip_A Enolase; structural gen 97.3 0.0016 5.6E-08 68.8 12.8 130 259-405 163-295 (410)
219 4dye_A Isomerase; enolase fami 97.3 0.0022 7.4E-08 67.7 13.5 128 253-412 169-298 (398)
220 2cu0_A Inosine-5'-monophosphat 97.3 0.0022 7.5E-08 69.2 13.8 122 258-410 231-362 (486)
221 3glc_A Aldolase LSRF; TIM barr 97.3 0.0048 1.6E-07 62.7 15.1 148 241-416 105-268 (295)
222 3o63_A Probable thiamine-phosp 97.2 0.00066 2.2E-08 67.2 8.4 83 333-419 148-233 (243)
223 3zen_D Fatty acid synthase; tr 97.2 0.0012 4E-08 84.9 12.5 192 186-412 427-653 (3089)
224 1zlp_A PSR132, petal death pro 97.2 0.014 4.8E-07 59.9 18.0 201 187-409 38-261 (318)
225 3ih1_A Methylisocitrate lyase; 97.2 0.0073 2.5E-07 61.7 15.8 199 186-410 27-248 (305)
226 1jvn_A Glutamine, bifunctional 97.1 0.00059 2E-08 75.0 7.2 90 327-420 280-395 (555)
227 3ctl_A D-allulose-6-phosphate 97.1 0.0022 7.5E-08 62.9 10.5 146 244-413 3-204 (231)
228 3b8i_A PA4872 oxaloacetate dec 97.1 0.019 6.5E-07 58.1 17.6 207 187-420 20-251 (287)
229 1tqx_A D-ribulose-5-phosphate 97.0 0.007 2.4E-07 59.2 13.5 177 207-418 28-214 (227)
230 1n7k_A Deoxyribose-phosphate a 97.0 0.0082 2.8E-07 59.1 13.9 185 190-410 28-228 (234)
231 3eoo_A Methylisocitrate lyase; 97.0 0.013 4.6E-07 59.6 15.8 202 187-410 21-244 (298)
232 1o66_A 3-methyl-2-oxobutanoate 97.0 0.013 4.6E-07 58.8 15.4 153 196-382 23-204 (275)
233 1vhc_A Putative KHG/KDPG aldol 97.0 0.0022 7.7E-08 62.5 9.4 89 333-441 123-212 (224)
234 1m3u_A 3-methyl-2-oxobutanoate 97.0 0.0064 2.2E-07 60.9 12.8 153 196-382 23-204 (264)
235 2hjp_A Phosphonopyruvate hydro 97.0 0.025 8.5E-07 57.3 17.0 200 188-409 15-239 (290)
236 1p1x_A Deoxyribose-phosphate a 96.9 0.0067 2.3E-07 60.6 12.1 120 259-394 90-218 (260)
237 1vcv_A Probable deoxyribose-ph 96.9 0.014 4.9E-07 57.0 14.2 117 266-394 77-204 (226)
238 1wbh_A KHG/KDPG aldolase; lyas 96.9 0.0076 2.6E-07 58.3 11.7 149 242-414 16-193 (214)
239 4a29_A Engineered retro-aldol 96.8 0.0053 1.8E-07 61.1 10.2 163 223-421 87-249 (258)
240 4dxk_A Mandelate racemase / mu 96.8 0.0059 2E-07 64.3 11.1 130 260-405 160-291 (400)
241 1s2w_A Phosphoenolpyruvate pho 96.7 0.052 1.8E-06 55.1 17.1 201 187-409 18-242 (295)
242 4avf_A Inosine-5'-monophosphat 96.7 0.0086 2.9E-07 64.8 12.0 70 328-405 229-298 (490)
243 2a4a_A Deoxyribose-phosphate a 96.7 0.011 3.7E-07 59.7 11.8 119 259-394 111-245 (281)
244 1oy0_A Ketopantoate hydroxymet 96.7 0.02 6.7E-07 57.8 13.7 160 187-382 33-222 (281)
245 2ze3_A DFA0005; organic waste 96.7 0.035 1.2E-06 55.8 15.4 190 190-409 18-236 (275)
246 3ceu_A Thiamine phosphate pyro 96.6 0.002 6.8E-08 61.7 5.6 74 334-412 102-179 (210)
247 3lye_A Oxaloacetate acetyl hyd 96.6 0.052 1.8E-06 55.4 16.3 201 187-409 24-251 (307)
248 2agk_A 1-(5-phosphoribosyl)-5- 96.6 0.002 6.8E-08 64.2 5.4 80 328-420 39-123 (260)
249 1q6o_A Humps, 3-keto-L-gulonat 96.6 0.042 1.4E-06 52.5 14.5 136 245-413 62-199 (216)
250 2pge_A MENC; OSBS, NYSGXRC, PS 96.5 0.016 5.6E-07 60.2 12.3 134 243-405 153-291 (377)
251 1wuf_A Hypothetical protein LI 96.5 0.014 4.9E-07 61.0 11.7 121 251-404 160-281 (393)
252 2czd_A Orotidine 5'-phosphate 96.5 0.063 2.2E-06 51.0 15.3 132 243-413 55-193 (208)
253 3jr2_A Hexulose-6-phosphate sy 96.5 0.0052 1.8E-07 59.1 7.6 145 234-410 52-199 (218)
254 3fa4_A 2,3-dimethylmalate lyas 96.3 0.071 2.4E-06 54.3 15.1 200 188-409 18-243 (302)
255 2qiw_A PEP phosphonomutase; st 96.3 0.066 2.3E-06 53.2 14.3 188 187-407 19-238 (255)
256 3s5s_A Mandelate racemase/muco 96.2 0.026 8.7E-07 59.2 11.8 133 244-405 136-271 (389)
257 3exr_A RMPD (hexulose-6-phosph 96.1 0.032 1.1E-06 54.1 10.9 138 245-413 64-204 (221)
258 1mxs_A KDPG aldolase; 2-keto-3 96.1 0.0043 1.5E-07 60.5 4.8 69 334-413 133-202 (225)
259 2chr_A Chloromuconate cycloiso 96.1 0.11 3.8E-06 53.5 15.6 127 250-405 141-269 (370)
260 4eiv_A Deoxyribose-phosphate a 96.0 0.062 2.1E-06 54.4 12.9 156 260-449 106-289 (297)
261 3r2g_A Inosine 5'-monophosphat 96.0 0.01 3.5E-07 61.9 7.4 71 327-405 99-169 (361)
262 3kts_A Glycerol uptake operon 96.0 0.025 8.6E-07 54.0 9.3 73 327-412 114-186 (192)
263 3e96_A Dihydrodipicolinate syn 96.0 0.078 2.7E-06 54.0 13.7 129 252-402 31-166 (316)
264 3vav_A 3-methyl-2-oxobutanoate 96.0 0.096 3.3E-06 52.6 13.9 159 187-381 28-215 (275)
265 3vdg_A Probable glucarate dehy 96.0 0.05 1.7E-06 58.2 12.7 124 251-405 192-316 (445)
266 1xky_A Dihydrodipicolinate syn 96.0 0.17 6E-06 51.1 16.1 130 252-402 31-171 (301)
267 3u9i_A Mandelate racemase/muco 96.0 0.033 1.1E-06 58.5 11.1 139 246-405 159-300 (393)
268 3na8_A Putative dihydrodipicol 96.0 0.14 4.7E-06 52.2 15.4 132 252-403 43-185 (315)
269 3va8_A Probable dehydratase; e 95.9 0.04 1.4E-06 58.9 11.7 124 251-405 190-314 (445)
270 2h6r_A Triosephosphate isomera 95.9 0.028 9.5E-07 54.3 9.5 127 266-420 80-214 (219)
271 2vc6_A MOSA, dihydrodipicolina 95.9 0.13 4.4E-06 51.7 14.8 131 252-402 19-160 (292)
272 1vc4_A Indole-3-glycerol phosp 95.9 0.056 1.9E-06 53.5 11.9 97 311-418 45-146 (254)
273 3si9_A DHDPS, dihydrodipicolin 95.9 0.18 6.1E-06 51.4 15.8 132 252-403 41-183 (315)
274 4e38_A Keto-hydroxyglutarate-a 95.9 0.023 7.9E-07 55.8 8.8 147 243-413 35-209 (232)
275 1ypf_A GMP reductase; GUAC, pu 95.9 0.029 1E-06 57.6 9.9 94 297-404 81-176 (336)
276 3ru6_A Orotidine 5'-phosphate 95.8 0.33 1.1E-05 49.4 17.5 195 186-418 24-243 (303)
277 2yxg_A DHDPS, dihydrodipicolin 95.8 0.21 7.1E-06 50.1 15.9 131 252-402 19-160 (289)
278 4h83_A Mandelate racemase/muco 95.8 0.035 1.2E-06 58.1 10.5 126 251-404 163-290 (388)
279 2rfg_A Dihydrodipicolinate syn 95.8 0.17 5.8E-06 51.1 15.1 130 252-402 19-159 (297)
280 2ze3_A DFA0005; organic waste 95.8 0.032 1.1E-06 56.1 9.6 153 261-421 30-202 (275)
281 3flu_A DHDPS, dihydrodipicolin 95.8 0.25 8.5E-06 49.8 16.2 131 252-403 26-167 (297)
282 1qap_A Quinolinic acid phospho 95.7 0.048 1.6E-06 55.4 10.6 92 300-413 196-288 (296)
283 1f6k_A N-acetylneuraminate lya 95.7 0.23 7.8E-06 49.9 15.5 130 252-402 22-163 (293)
284 3khj_A Inosine-5-monophosphate 95.7 0.038 1.3E-06 57.5 10.0 95 295-405 79-173 (361)
285 3l21_A DHDPS, dihydrodipicolin 95.7 0.19 6.4E-06 50.9 14.9 132 252-404 34-176 (304)
286 2r8w_A AGR_C_1641P; APC7498, d 95.7 0.17 5.8E-06 52.0 14.7 130 252-402 53-193 (332)
287 3cu2_A Ribulose-5-phosphate 3- 95.6 0.04 1.4E-06 54.2 9.4 137 245-411 73-223 (237)
288 2ozt_A TLR1174 protein; struct 95.6 0.14 4.9E-06 52.2 13.9 125 251-404 115-244 (332)
289 3d0c_A Dihydrodipicolinate syn 95.6 0.12 4E-06 52.7 13.1 129 251-402 30-166 (314)
290 2wkj_A N-acetylneuraminate lya 95.6 0.22 7.5E-06 50.4 15.0 131 252-402 30-171 (303)
291 4h1z_A Enolase Q92ZS5; dehydra 95.6 0.11 3.6E-06 54.9 13.1 125 250-404 186-312 (412)
292 2v9d_A YAGE; dihydrodipicolini 95.6 0.22 7.6E-06 51.4 15.2 131 252-402 50-191 (343)
293 4hpn_A Putative uncharacterize 95.6 0.13 4.5E-06 53.2 13.7 110 266-404 157-268 (378)
294 3vc5_A Mandelate racemase/muco 95.6 0.071 2.4E-06 56.9 11.8 124 251-405 187-311 (441)
295 2ehh_A DHDPS, dihydrodipicolin 95.6 0.29 9.9E-06 49.2 15.7 131 252-402 19-160 (294)
296 3m5v_A DHDPS, dihydrodipicolin 95.5 0.3 1E-05 49.2 15.8 132 252-403 26-169 (301)
297 3daq_A DHDPS, dihydrodipicolin 95.5 0.31 1.1E-05 49.0 15.7 130 252-402 21-161 (292)
298 2hjp_A Phosphonopyruvate hydro 95.5 0.088 3E-06 53.3 11.5 155 260-421 28-201 (290)
299 2b7n_A Probable nicotinate-nuc 95.4 0.087 3E-06 52.7 11.3 92 300-414 169-266 (273)
300 1o5k_A DHDPS, dihydrodipicolin 95.4 0.22 7.5E-06 50.4 14.4 131 252-402 31-172 (306)
301 3lab_A Putative KDPG (2-keto-3 95.4 0.037 1.3E-06 53.8 8.0 150 241-414 12-195 (217)
302 3usb_A Inosine-5'-monophosphat 95.4 0.055 1.9E-06 58.8 10.2 71 328-406 256-326 (511)
303 1xg4_A Probable methylisocitra 95.3 0.076 2.6E-06 53.9 10.5 153 260-420 30-200 (295)
304 3cpr_A Dihydrodipicolinate syn 95.3 0.34 1.2E-05 49.0 15.3 130 252-402 35-175 (304)
305 3fkr_A L-2-keto-3-deoxyarabona 95.2 0.25 8.7E-06 50.1 13.9 131 252-402 27-170 (309)
306 3vav_A 3-methyl-2-oxobutanoate 95.1 0.27 9.2E-06 49.4 13.7 109 259-383 41-151 (275)
307 3ve9_A Orotidine-5'-phosphate 95.1 0.18 6.2E-06 48.7 12.1 140 241-418 50-193 (215)
308 3tsm_A IGPS, indole-3-glycerol 95.1 0.048 1.6E-06 54.7 8.2 76 327-410 79-154 (272)
309 3a5f_A Dihydrodipicolinate syn 95.1 0.2 6.7E-06 50.4 12.8 131 251-402 19-160 (291)
310 4aaj_A N-(5'-phosphoribosyl)an 95.1 0.68 2.3E-05 45.1 16.1 179 194-409 25-206 (228)
311 3qze_A DHDPS, dihydrodipicolin 95.1 0.46 1.6E-05 48.3 15.6 131 252-403 42-183 (314)
312 1wue_A Mandelate racemase/muco 95.1 0.092 3.1E-06 54.7 10.6 122 251-405 160-282 (386)
313 3qld_A Mandelate racemase/muco 95.1 0.21 7.2E-06 52.2 13.3 132 243-407 139-272 (388)
314 3qja_A IGPS, indole-3-glycerol 95.1 0.046 1.6E-06 54.8 7.8 78 327-412 72-149 (272)
315 3ih1_A Methylisocitrate lyase; 95.0 0.078 2.7E-06 54.1 9.5 153 259-421 41-209 (305)
316 3q58_A N-acetylmannosamine-6-p 95.0 0.52 1.8E-05 45.7 15.1 119 252-404 34-155 (229)
317 3dz1_A Dihydrodipicolinate syn 95.0 0.26 8.8E-06 50.1 13.3 134 252-403 27-169 (313)
318 3cyj_A Mandelate racemase/muco 95.0 0.43 1.5E-05 49.3 15.2 123 252-404 144-269 (372)
319 3b4u_A Dihydrodipicolinate syn 94.9 0.67 2.3E-05 46.5 16.1 133 252-402 22-168 (294)
320 2ojp_A DHDPS, dihydrodipicolin 94.9 0.24 8.3E-06 49.7 12.7 130 252-402 20-160 (292)
321 3tak_A DHDPS, dihydrodipicolin 94.9 0.55 1.9E-05 47.1 15.3 133 252-405 20-163 (291)
322 3igs_A N-acetylmannosamine-6-p 94.8 0.97 3.3E-05 43.9 16.3 118 253-404 35-155 (232)
323 1vqt_A Orotidine 5'-phosphate 94.7 0.26 8.9E-06 47.4 11.8 138 241-419 58-206 (213)
324 2yci_X 5-methyltetrahydrofolat 94.7 0.2 6.9E-06 50.1 11.3 109 253-393 33-149 (271)
325 3eb2_A Putative dihydrodipicol 94.7 0.33 1.1E-05 49.0 13.0 130 252-402 23-163 (300)
326 3s5o_A 4-hydroxy-2-oxoglutarat 94.6 0.58 2E-05 47.3 14.8 131 252-403 33-176 (307)
327 3qfe_A Putative dihydrodipicol 94.6 0.7 2.4E-05 47.1 15.4 132 252-402 30-174 (318)
328 3h5d_A DHDPS, dihydrodipicolin 94.6 0.55 1.9E-05 47.7 14.6 130 252-402 26-167 (311)
329 1zlp_A PSR132, petal death pro 94.6 0.16 5.3E-06 52.1 10.4 153 260-420 52-222 (318)
330 4fo4_A Inosine 5'-monophosphat 94.5 0.15 5E-06 53.3 10.3 98 295-405 80-177 (366)
331 1nsj_A PRAI, phosphoribosyl an 94.5 0.16 5.6E-06 48.6 9.8 141 245-413 3-188 (205)
332 1x1o_A Nicotinate-nucleotide p 94.4 0.24 8.3E-06 50.0 11.4 68 333-413 209-276 (286)
333 3nl6_A Thiamine biosynthetic b 94.4 0.096 3.3E-06 57.4 8.9 86 333-419 121-223 (540)
334 2jbm_A Nicotinate-nucleotide p 94.3 0.16 5.6E-06 51.5 9.9 67 334-414 211-281 (299)
335 3lab_A Putative KDPG (2-keto-3 94.3 0.21 7.1E-06 48.6 10.1 92 312-420 13-104 (217)
336 2qiw_A PEP phosphonomutase; st 94.3 0.052 1.8E-06 54.0 5.9 151 260-420 33-201 (255)
337 1y0e_A Putative N-acetylmannos 94.2 0.22 7.6E-06 47.2 10.1 97 301-405 46-146 (223)
338 1o4u_A Type II quinolic acid p 94.2 0.097 3.3E-06 52.9 7.8 94 300-413 180-276 (285)
339 3mzn_A Glucarate dehydratase; 94.2 0.4 1.4E-05 51.1 13.0 125 251-404 181-310 (450)
340 1o66_A 3-methyl-2-oxobutanoate 94.1 0.28 9.4E-06 49.3 10.9 108 260-382 30-139 (275)
341 1p0k_A Isopentenyl-diphosphate 94.1 0.25 8.5E-06 50.6 10.9 88 309-405 114-209 (349)
342 4af0_A Inosine-5'-monophosphat 94.1 0.058 2E-06 58.9 6.4 73 327-407 280-352 (556)
343 3p0w_A Mandelate racemase/muco 94.1 0.34 1.2E-05 52.1 12.3 125 251-404 199-328 (470)
344 4e38_A Keto-hydroxyglutarate-a 94.0 0.27 9.4E-06 48.1 10.5 114 301-434 26-143 (232)
345 3m47_A Orotidine 5'-phosphate 94.0 1.1 3.7E-05 43.5 14.6 192 186-416 12-213 (228)
346 1s2w_A Phosphoenolpyruvate pho 93.8 0.27 9.4E-06 49.8 10.4 152 261-420 33-204 (295)
347 3o1n_A 3-dehydroquinate dehydr 93.8 1.9 6.5E-05 43.1 16.5 142 241-405 39-196 (276)
348 1zfj_A Inosine monophosphate d 93.8 0.18 6.3E-06 53.9 9.6 70 329-406 234-303 (491)
349 2nuw_A 2-keto-3-deoxygluconate 93.8 0.98 3.3E-05 45.2 14.3 119 252-391 18-146 (288)
350 4adt_A Pyridoxine biosynthetic 93.7 0.085 2.9E-06 53.6 6.3 86 330-420 31-121 (297)
351 3ldv_A Orotidine 5'-phosphate 93.7 2.9 0.0001 41.3 17.3 188 186-418 27-247 (255)
352 3v5c_A Mandelate racemase/muco 93.7 0.36 1.2E-05 50.5 11.3 131 253-404 149-284 (392)
353 2wqp_A Polysialic acid capsule 93.6 0.79 2.7E-05 47.5 13.6 101 289-400 131-231 (349)
354 3iwp_A Copper homeostasis prot 93.6 0.74 2.5E-05 46.5 12.9 129 253-407 110-241 (287)
355 3b8i_A PA4872 oxaloacetate dec 93.6 0.21 7.2E-06 50.5 8.9 155 260-421 34-202 (287)
356 1p4c_A L(+)-mandelate dehydrog 93.5 0.012 4.1E-07 61.7 -0.3 45 355-404 208-252 (380)
357 1vs1_A 3-deoxy-7-phosphoheptul 93.5 0.62 2.1E-05 46.7 12.2 108 289-407 128-244 (276)
358 1hg3_A Triosephosphate isomera 93.5 0.42 1.4E-05 46.5 10.6 84 334-419 131-219 (225)
359 1h1y_A D-ribulose-5-phosphate 93.5 0.33 1.1E-05 46.6 9.9 136 240-405 5-145 (228)
360 1eix_A Orotidine 5'-monophosph 93.5 3 0.0001 40.6 16.9 139 242-414 68-230 (245)
361 4h2h_A Mandelate racemase/muco 93.4 0.72 2.5E-05 47.7 13.0 130 243-404 141-273 (376)
362 2r91_A 2-keto-3-deoxy-(6-phosp 93.3 1.1 3.7E-05 44.7 13.8 119 252-391 17-145 (286)
363 3pfr_A Mandelate racemase/muco 93.3 0.5 1.7E-05 50.5 11.8 125 251-404 184-313 (455)
364 2yyu_A Orotidine 5'-phosphate 93.2 2.7 9.1E-05 40.9 16.1 138 243-414 59-224 (246)
365 3c2e_A Nicotinate-nucleotide p 93.2 0.084 2.9E-06 53.5 5.4 66 336-414 215-286 (294)
366 3sz8_A 2-dehydro-3-deoxyphosph 93.1 0.66 2.3E-05 46.8 11.7 108 289-406 117-242 (285)
367 1vli_A Spore coat polysacchari 93.1 1.2 4E-05 46.8 14.0 101 289-400 141-243 (385)
368 1vr6_A Phospho-2-dehydro-3-deo 93.1 0.43 1.5E-05 49.5 10.6 108 289-407 196-312 (350)
369 1gox_A (S)-2-hydroxy-acid oxid 93.1 0.68 2.3E-05 48.0 12.2 88 311-405 122-253 (370)
370 1f6y_A 5-methyltetrahydrofolat 93.1 0.67 2.3E-05 46.0 11.6 96 252-379 23-121 (262)
371 1w3i_A EDA, 2-keto-3-deoxy glu 93.1 1.2 4.1E-05 44.6 13.7 119 252-391 18-146 (293)
372 3eoo_A Methylisocitrate lyase; 93.1 0.47 1.6E-05 48.1 10.6 150 261-420 36-204 (298)
373 1m3u_A 3-methyl-2-oxobutanoate 93.0 0.42 1.4E-05 47.7 10.0 105 260-379 30-135 (264)
374 1zco_A 2-dehydro-3-deoxyphosph 93.0 0.47 1.6E-05 47.2 10.3 108 289-407 113-229 (262)
375 2opj_A O-succinylbenzoate-COA 92.9 0.47 1.6E-05 48.4 10.5 128 246-405 74-203 (327)
376 3ijl_A Muconate cycloisomerase 92.9 0.75 2.6E-05 47.0 12.1 124 247-404 129-252 (338)
377 1v5x_A PRA isomerase, phosphor 92.9 2.3 7.8E-05 40.6 14.6 174 195-413 6-182 (203)
378 1rvg_A Fructose-1,6-bisphospha 92.9 1.6 5.4E-05 44.4 14.1 107 286-395 102-223 (305)
379 1jcn_A Inosine monophosphate d 92.8 0.14 4.7E-06 55.4 6.7 71 328-406 255-325 (514)
380 1w0m_A TIM, triosephosphate is 92.8 0.46 1.6E-05 46.3 9.8 83 334-418 128-215 (226)
381 2gjl_A Hypothetical protein PA 92.7 0.57 1.9E-05 47.5 10.8 97 294-406 50-147 (328)
382 3paj_A Nicotinate-nucleotide p 92.7 0.97 3.3E-05 46.3 12.4 84 301-406 220-304 (320)
383 1qpo_A Quinolinate acid phosph 92.6 0.33 1.1E-05 48.9 8.8 93 301-413 183-277 (284)
384 2hmc_A AGR_L_411P, dihydrodipi 92.5 1.9 6.7E-05 44.3 14.6 130 252-402 45-184 (344)
385 3g8r_A Probable spore coat pol 92.4 2 6.9E-05 44.5 14.5 98 259-380 103-200 (350)
386 4fxs_A Inosine-5'-monophosphat 92.4 0.17 5.7E-06 54.8 6.6 69 329-405 232-300 (496)
387 1wa3_A 2-keto-3-deoxy-6-phosph 92.3 0.41 1.4E-05 44.8 8.5 83 311-407 9-91 (205)
388 1o60_A 2-dehydro-3-deoxyphosph 92.3 0.7 2.4E-05 46.7 10.6 109 289-407 115-241 (292)
389 3fs2_A 2-dehydro-3-deoxyphosph 92.2 0.69 2.4E-05 46.9 10.5 106 289-406 138-261 (298)
390 4dbe_A Orotidine 5'-phosphate 92.2 1.1 3.9E-05 43.2 11.7 141 243-417 55-199 (222)
391 2isw_A Putative fructose-1,6-b 92.1 1.2 4E-05 45.7 12.2 107 286-395 105-225 (323)
392 3iv3_A Tagatose 1,6-diphosphat 92.1 0.56 1.9E-05 48.3 9.8 138 260-412 116-287 (332)
393 1yxy_A Putative N-acetylmannos 92.1 0.83 2.8E-05 43.6 10.6 134 239-402 15-157 (234)
394 1vrd_A Inosine-5'-monophosphat 92.0 0.23 7.8E-06 53.3 7.2 70 328-405 237-306 (494)
395 3tfx_A Orotidine 5'-phosphate 92.0 5.3 0.00018 39.5 16.5 145 241-418 56-229 (259)
396 1ydn_A Hydroxymethylglutaryl-C 92.0 1.4 4.9E-05 43.9 12.5 148 246-405 75-231 (295)
397 3fok_A Uncharacterized protein 91.9 0.32 1.1E-05 49.5 7.6 119 266-410 139-278 (307)
398 3tqv_A Nicotinate-nucleotide p 91.9 1.1 3.6E-05 45.3 11.4 85 301-407 187-272 (287)
399 2qkf_A 3-deoxy-D-manno-octulos 91.9 0.71 2.4E-05 46.3 10.1 110 289-408 112-239 (280)
400 3sr7_A Isopentenyl-diphosphate 91.9 0.48 1.6E-05 49.4 9.1 106 287-404 122-236 (365)
401 1gvf_A Tagatose-bisphosphate a 91.9 2.6 8.8E-05 42.5 14.2 119 286-409 104-236 (286)
402 4h3d_A 3-dehydroquinate dehydr 91.9 1.8 6.3E-05 42.7 13.0 95 242-348 20-121 (258)
403 3q94_A Fructose-bisphosphate a 91.6 3 0.0001 42.0 14.4 119 286-409 110-240 (288)
404 3fa4_A 2,3-dimethylmalate lyas 91.6 0.78 2.7E-05 46.6 10.1 155 259-420 30-203 (302)
405 1dbt_A Orotidine 5'-phosphate 91.6 3.1 0.0001 40.3 14.0 138 243-414 58-223 (239)
406 1eep_A Inosine 5'-monophosphat 91.5 0.33 1.1E-05 50.8 7.4 69 329-405 154-222 (404)
407 2v82_A 2-dehydro-3-deoxy-6-pho 91.4 1 3.5E-05 42.3 10.2 92 311-419 6-98 (212)
408 3nav_A Tryptophan synthase alp 91.3 0.61 2.1E-05 46.6 8.9 140 298-440 6-174 (271)
409 3cpr_A Dihydrodipicolinate syn 91.2 0.45 1.6E-05 48.0 7.9 87 325-413 35-126 (304)
410 3gnn_A Nicotinate-nucleotide p 91.1 1 3.5E-05 45.7 10.3 86 301-408 198-284 (298)
411 4g8t_A Glucarate dehydratase; 91.1 1.7 5.8E-05 46.5 12.7 125 252-404 202-330 (464)
412 1vkf_A Glycerol uptake operon 91.1 0.51 1.8E-05 44.8 7.6 68 329-412 117-184 (188)
413 3n9r_A Fructose-bisphosphate a 91.1 2.2 7.6E-05 43.4 12.8 136 241-395 74-225 (307)
414 3bw2_A 2-nitropropane dioxygen 91.1 1.6 5.6E-05 44.8 12.2 98 294-406 45-174 (369)
415 3p6l_A Sugar phosphate isomera 91.0 1.4 4.6E-05 42.2 10.8 136 242-394 10-153 (262)
416 2bdq_A Copper homeostasis prot 91.0 3.1 0.00011 40.4 13.2 131 253-404 75-206 (224)
417 3sgz_A Hydroxyacid oxidase 2; 91.0 0.92 3.1E-05 47.0 10.1 43 357-404 202-244 (352)
418 3vnd_A TSA, tryptophan synthas 90.9 0.72 2.5E-05 46.0 9.0 139 298-440 4-172 (267)
419 3tr2_A Orotidine 5'-phosphate 90.9 5.5 0.00019 38.9 15.1 144 241-417 59-228 (239)
420 1xky_A Dihydrodipicolinate syn 90.9 0.43 1.5E-05 48.2 7.3 86 326-413 32-122 (301)
421 3a5f_A Dihydrodipicolinate syn 90.9 0.44 1.5E-05 47.8 7.4 87 325-413 20-111 (291)
422 3ffs_A Inosine-5-monophosphate 90.8 0.4 1.4E-05 50.6 7.3 67 330-405 146-212 (400)
423 1oy0_A Ketopantoate hydroxymet 90.8 2.1 7.2E-05 43.0 12.1 105 259-379 46-154 (281)
424 3qze_A DHDPS, dihydrodipicolin 90.8 0.41 1.4E-05 48.7 7.1 88 325-413 42-133 (314)
425 3nvt_A 3-deoxy-D-arabino-heptu 90.7 1.3 4.6E-05 46.4 11.2 107 289-406 232-347 (385)
426 3bo9_A Putative nitroalkan dio 90.7 1.4 4.8E-05 44.7 11.1 90 295-404 61-150 (326)
427 2ojp_A DHDPS, dihydrodipicolin 90.7 0.42 1.4E-05 47.9 7.0 86 326-413 21-111 (292)
428 3flu_A DHDPS, dihydrodipicolin 90.7 0.45 1.6E-05 47.9 7.3 87 326-413 27-117 (297)
429 2ftp_A Hydroxymethylglutaryl-C 90.6 3 0.0001 41.8 13.3 150 251-413 84-244 (302)
430 1ep3_A Dihydroorotate dehydrog 90.6 1 3.4E-05 44.8 9.7 99 300-404 86-195 (311)
431 1f6k_A N-acetylneuraminate lya 90.5 0.45 1.5E-05 47.8 7.1 86 326-413 23-114 (293)
432 2ehh_A DHDPS, dihydrodipicolin 90.5 0.48 1.6E-05 47.6 7.3 87 325-413 19-110 (294)
433 1m5w_A Pyridoxal phosphate bio 90.5 2.4 8.2E-05 41.7 11.9 115 285-412 102-222 (243)
434 3l21_A DHDPS, dihydrodipicolin 90.4 0.44 1.5E-05 48.2 6.9 88 325-413 34-125 (304)
435 3daq_A DHDPS, dihydrodipicolin 90.4 0.42 1.4E-05 48.0 6.8 88 325-413 21-112 (292)
436 3lmz_A Putative sugar isomeras 90.3 3.3 0.00011 39.5 12.9 130 241-395 17-153 (257)
437 2ekc_A AQ_1548, tryptophan syn 90.3 1.5 5E-05 43.2 10.5 84 319-405 24-129 (262)
438 2wkj_A N-acetylneuraminate lya 90.3 0.45 1.5E-05 48.1 6.9 86 326-413 31-121 (303)
439 3lye_A Oxaloacetate acetyl hyd 90.1 1.3 4.3E-05 45.2 10.0 155 259-420 37-211 (307)
440 2zbt_A Pyridoxal biosynthesis 90.1 0.45 1.5E-05 47.5 6.6 97 310-420 20-121 (297)
441 2yxg_A DHDPS, dihydrodipicolin 90.0 0.49 1.7E-05 47.4 6.9 87 325-413 19-110 (289)
442 2c6q_A GMP reductase 2; TIM ba 90.0 0.57 2E-05 48.4 7.5 68 330-405 120-189 (351)
443 3vkj_A Isopentenyl-diphosphate 89.8 0.4 1.4E-05 50.0 6.2 107 287-404 95-217 (368)
444 3ekg_A Mandelate racemase/muco 89.7 1.5 5.1E-05 46.2 10.6 116 266-404 172-292 (404)
445 3b4u_A Dihydrodipicolinate syn 89.7 0.47 1.6E-05 47.7 6.4 86 326-412 23-113 (294)
446 3m5v_A DHDPS, dihydrodipicolin 89.7 0.55 1.9E-05 47.3 7.0 88 325-413 26-118 (301)
447 3k13_A 5-methyltetrahydrofolat 89.7 1.8 6E-05 43.9 10.7 107 252-388 35-152 (300)
448 1o5k_A DHDPS, dihydrodipicolin 89.7 0.52 1.8E-05 47.7 6.8 87 325-413 31-122 (306)
449 3na8_A Putative dihydrodipicol 89.6 0.46 1.6E-05 48.3 6.4 88 325-413 43-134 (315)
450 3ajx_A 3-hexulose-6-phosphate 89.6 2.6 8.8E-05 39.2 11.2 124 248-404 7-133 (207)
451 3si9_A DHDPS, dihydrodipicolin 89.6 0.44 1.5E-05 48.5 6.2 88 325-413 41-132 (315)
452 2rfg_A Dihydrodipicolinate syn 89.6 0.44 1.5E-05 48.0 6.1 87 325-413 19-110 (297)
453 3gk0_A PNP synthase, pyridoxin 89.5 3.4 0.00012 41.3 12.2 115 285-412 130-250 (278)
454 3tak_A DHDPS, dihydrodipicolin 89.5 0.47 1.6E-05 47.6 6.3 87 326-413 21-111 (291)
455 2z6i_A Trans-2-enoyl-ACP reduc 89.4 1.5 5.1E-05 44.5 10.0 92 295-406 47-139 (332)
456 2r8w_A AGR_C_1641P; APC7498, d 89.4 0.46 1.6E-05 48.7 6.2 87 326-413 54-144 (332)
457 3iwp_A Copper homeostasis prot 89.3 6.1 0.00021 39.8 14.1 138 244-405 40-186 (287)
458 3fkr_A L-2-keto-3-deoxyarabona 89.1 0.66 2.3E-05 47.0 7.0 83 325-409 27-114 (309)
459 2nli_A Lactate oxidase; flavoe 89.0 1.3 4.5E-05 46.0 9.4 87 311-404 132-256 (368)
460 2yr1_A 3-dehydroquinate dehydr 89.0 3.2 0.00011 40.9 11.7 143 242-405 20-176 (257)
461 3s5o_A 4-hydroxy-2-oxoglutarat 89.0 0.87 3E-05 46.0 7.8 85 326-411 34-122 (307)
462 2vc6_A MOSA, dihydrodipicolina 88.9 0.49 1.7E-05 47.5 5.8 88 325-413 19-110 (292)
463 3l0g_A Nicotinate-nucleotide p 88.9 2.3 8E-05 43.1 10.8 84 301-406 196-280 (300)
464 2v9d_A YAGE; dihydrodipicolini 88.9 0.54 1.8E-05 48.4 6.3 87 325-413 50-141 (343)
465 3tr9_A Dihydropteroate synthas 88.8 0.82 2.8E-05 46.7 7.5 84 251-344 46-129 (314)
466 1jub_A Dihydroorotate dehydrog 88.5 1.6 5.5E-05 43.6 9.4 87 311-404 93-191 (311)
467 3f4w_A Putative hexulose 6 pho 88.5 2.9 0.0001 38.9 10.7 124 246-405 3-134 (211)
468 4dpp_A DHDPS 2, dihydrodipicol 88.5 0.88 3E-05 47.3 7.6 85 326-412 79-168 (360)
469 4dpp_A DHDPS 2, dihydrodipicol 88.4 6.7 0.00023 40.7 14.2 82 252-347 78-161 (360)
470 3tml_A 2-dehydro-3-deoxyphosph 88.4 1.7 5.7E-05 43.9 9.3 105 289-406 114-243 (288)
471 1kko_A 3-methylaspartate ammon 88.3 2.1 7E-05 45.0 10.4 96 299-404 218-330 (413)
472 1wbh_A KHG/KDPG aldolase; lyas 88.1 2.9 9.8E-05 40.0 10.5 92 312-420 16-107 (214)
473 1vhc_A Putative KHG/KDPG aldol 88.0 2.7 9.1E-05 40.6 10.3 92 312-420 17-108 (224)
474 1kbi_A Cytochrome B2, L-LCR; f 88.0 1.6 5.4E-05 47.4 9.5 87 311-404 246-370 (511)
475 3d0c_A Dihydrodipicolinate syn 88.0 0.55 1.9E-05 47.7 5.6 86 325-413 31-121 (314)
476 1f8m_A Isocitrate lyase, ICL; 87.8 5 0.00017 42.6 12.9 156 242-409 149-352 (429)
477 1jpd_X L-Ala-D/L-Glu epimerase 87.6 1.7 5.8E-05 43.9 8.9 122 247-404 127-249 (324)
478 3qfe_A Putative dihydrodipicol 87.5 1.1 3.6E-05 45.7 7.4 85 326-412 31-121 (318)
479 3fxg_A Rhamnonate dehydratase; 87.2 1.5 5.2E-05 46.9 8.7 117 267-404 179-297 (455)
480 3qw3_A Orotidine-5-phosphate d 87.2 11 0.00037 37.1 14.3 137 240-413 75-236 (255)
481 3h5d_A DHDPS, dihydrodipicolin 87.2 0.97 3.3E-05 45.8 6.9 87 326-413 27-118 (311)
482 2pcq_A Putative dihydrodipicol 87.2 6.8 0.00023 38.9 13.0 125 252-402 17-151 (283)
483 3dz1_A Dihydrodipicolinate syn 87.1 1.5 5E-05 44.5 8.1 84 326-412 28-115 (313)
484 2okt_A OSB synthetase, O-succi 86.8 2.9 0.0001 42.5 10.3 110 267-411 140-250 (342)
485 1mxs_A KDPG aldolase; 2-keto-3 86.7 2.9 9.8E-05 40.4 9.6 102 299-420 16-117 (225)
486 2e6f_A Dihydroorotate dehydrog 86.6 5.8 0.0002 39.5 12.2 88 310-404 92-194 (314)
487 2p3z_A L-rhamnonate dehydratas 86.2 3 0.0001 43.9 10.3 117 267-404 185-303 (415)
488 2q02_A Putative cytoplasmic pr 86.1 8.6 0.00029 36.4 12.7 134 243-395 8-160 (272)
489 1qop_A Tryptophan synthase alp 85.9 2.4 8.2E-05 41.7 8.8 86 320-409 25-133 (268)
490 3e96_A Dihydrodipicolinate syn 85.8 0.61 2.1E-05 47.3 4.6 85 326-412 32-120 (316)
491 1twd_A Copper homeostasis prot 85.5 7.9 0.00027 38.3 12.2 125 252-402 71-195 (256)
492 1kcz_A Beta-methylaspartase; b 85.4 3.6 0.00012 43.0 10.3 95 299-405 218-331 (413)
493 1gte_A Dihydropyrimidine dehyd 85.3 4 0.00014 47.8 11.6 97 303-404 625-734 (1025)
494 2fym_A Enolase; RNA degradosom 85.3 3.3 0.00011 43.7 10.0 71 325-404 268-340 (431)
495 1aj0_A DHPS, dihydropteroate s 85.2 1.4 4.7E-05 44.3 6.7 78 252-344 36-114 (282)
496 3eb2_A Putative dihydrodipicol 85.0 0.37 1.3E-05 48.6 2.4 87 325-413 23-114 (300)
497 1sfl_A 3-dehydroquinate dehydr 85.0 3.9 0.00013 39.8 9.7 143 243-405 5-162 (238)
498 1w6t_A Enolase; bacterial infe 84.9 4.2 0.00014 43.1 10.7 71 326-405 281-353 (444)
499 3i4e_A Isocitrate lyase; struc 84.8 5.8 0.0002 42.2 11.5 157 242-410 153-357 (439)
500 3noy_A 4-hydroxy-3-methylbut-2 84.7 8.1 0.00028 40.1 12.2 121 311-444 29-174 (366)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=8.6e-56 Score=455.71 Aligned_cols=302 Identities=24% Similarity=0.390 Sum_probs=272.0
Q ss_pred cccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHH
Q 009196 183 IDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVEL 262 (540)
Q Consensus 183 l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~ 262 (540)
++|+||++||||+++++.+||++|+++|++++||||+++.++.++....|..+ .|..+.|+++||+|++|+.|++||++
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~g~~~~~~~~aa~~ 79 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIFGSEPNELSEAARI 79 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEECSCHHHHHHHHHH
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeCCCCHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999988888888888 89999999999999999999999999
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCc
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGAS 342 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvd 342 (540)
+. ++ ||+||||+|||..++++++||++|+++++++.+||+++++++++||+||+|.||+.. +..++++.++++|++
T Consensus 80 a~-~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~--~~~~~a~~l~~~G~d 155 (318)
T 1vhn_A 80 LS-EK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKN--EVEEIYRILVEEGVD 155 (318)
T ss_dssp HT-TT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSC--CHHHHHHHHHHTTCC
T ss_pred HH-Hh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChH--HHHHHHHHHHHhCCC
Confidence 98 67 999999999999999999999999999999999999999999999999999999753 234899999999999
Q ss_pred EEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh--
Q 009196 343 AVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE-- 420 (540)
Q Consensus 343 aItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~-- 420 (540)
+|+||+|++.++|+++++|+++.++++ ++|||+||||.|++|+.++++. +|||+|||||++|.|||+|.++++
T Consensus 156 ~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~da~~~l~~-~gad~V~iGR~~l~~P~l~~~~~~~~ 230 (318)
T 1vhn_A 156 EVFIHTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPEDAKRALEE-SGCDGLLVARGAIGRPWIFKQIKDFL 230 (318)
T ss_dssp EEEEESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHHHHHHHHHH-HCCSEEEESGGGTTCTTHHHHHHHHH
T ss_pred EEEEcCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHHHHHHHHHc-CCCCEEEECHHHHhCcchHHHHHHHH
Confidence 999999999999999999999888876 5999999999999999999986 799999999999999999999987
Q ss_pred --cCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhCCCccccccccccCCCCCCCCCCchHhH
Q 009196 421 --QRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETTRHFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPAYSGRDDLET 498 (540)
Q Consensus 421 --~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~R~~l~e~ls~~~ryip~glle~~p~~~~~rp~~~~~r~~le~ 498 (540)
+....++..++++++++|+++.+++||. ..++..+|+|+. ||.+++|.+ ...| ..
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~----~~~~~~~~~---------------~~~r---~~ 287 (318)
T 1vhn_A 231 RSGKYSEPSREEILRTFERHLELLIKTKGE-RKAVVEMRKFLA----GYTKDLKGA---------------RRFR---EK 287 (318)
T ss_dssp HHSCCCCCCHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHTTHH----HHTTTCTTH---------------HHHH---HH
T ss_pred hCCCCCCCCHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHH----HHHhcCCCh---------------HHHH---HH
Confidence 5222478899999999999999999994 568999999876 667777765 1224 88
Q ss_pred hhcCCCHHHHHHHHHHHcC
Q 009196 499 LMASDSAADWIRISEMLLG 517 (540)
Q Consensus 499 l~~s~~~~d~~ki~e~~l~ 517 (540)
|+.+.+.+++.++++.++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~ 306 (318)
T 1vhn_A 288 VMKIEEVQILKEMFYNFIK 306 (318)
T ss_dssp HTTCCCHHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHH
Confidence 9999999999999998874
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=1.6e-52 Score=437.40 Aligned_cols=300 Identities=21% Similarity=0.297 Sum_probs=258.3
Q ss_pred cCCcEEEccCCCCCCHHHHHHHHHhCC-CEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHH
Q 009196 185 FREKLYLAPLTTVGNLPFRRVCKVLGA-DVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELI 263 (540)
Q Consensus 185 lknrliLAPM~~vtdlpfR~l~~~~Ga-dl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~ 263 (540)
|+||++||||+++||.+||++|+.+|+ +++||||+++.+++++... .++..|+.+.|+++||+|++|+.|++||+++
T Consensus 2 l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~~--~~~~~~~~~~p~~vQL~g~~p~~~~~aA~~a 79 (350)
T 3b0p_A 2 LDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRE--RLLAFRPEEHPIALQLAGSDPKSLAEAARIG 79 (350)
T ss_dssp CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCHH--HHHCCCGGGCSEEEEEECSCHHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCHH--HHhccCCCCCeEEEEeCCCCHHHHHHHHHHH
Confidence 789999999999999999999999985 9999999999998877653 4556788899999999999999999999999
Q ss_pred HHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCCh--hHHHHHHHHHHHcCC
Q 009196 264 DQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGK--NRIDSLIADIGTWGA 341 (540)
Q Consensus 264 ~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~--~~~~~la~~leeaGv 341 (540)
. ++|||+||||+|||.+++++++||++|+++++++.+||+++++++++||+||+|+||++.. .++.++++.++++|+
T Consensus 80 ~-~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~ 158 (350)
T 3b0p_A 80 E-AFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGV 158 (350)
T ss_dssp H-HTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTC
T ss_pred H-HcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCC
Confidence 7 6899999999999999999999999999999999999999999899999999999997643 368899999999999
Q ss_pred cEEEEecccccCccCC-------CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 342 SAVTVHGRTRQQRYSK-------LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 342 daItVHgRtr~q~y~g-------~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
++|+||+|++.++|++ +++|+++.++++.++ ++|||+||||.|++|+.++++ |||+|||||++|.|||+
T Consensus 159 d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPVianGgI~s~eda~~~l~---GaD~V~iGRa~l~~P~l 234 (350)
T 3b0p_A 159 KVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTFVTNGGIRSLEEALFHLK---RVDGVMLGRAVYEDPFV 234 (350)
T ss_dssp CEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHT---TSSEEEECHHHHHCGGG
T ss_pred CEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeEEEECCcCCHHHHHHHHh---CCCEEEECHHHHhCcHH
Confidence 9999999998766654 368999999999986 699999999999999999885 69999999999999999
Q ss_pred hHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhCCCccccccccccCCCCCCCC
Q 009196 415 FTEIKEQRHW---DITSGERLNIMKDFARFGLEHWGSDKKGVETTRHFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPAYS 491 (540)
Q Consensus 415 f~eik~~~~~---~~s~~erl~il~~~~~~~le~~g~d~~gv~~~R~~l~e~ls~~~ryip~glle~~p~~~~~rp~~~~ 491 (540)
|.++++.... .++..|+++.+.+|+...++ +|. ++..+|||+. ||.+++|.+ ..
T Consensus 235 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~g~---~~~~~~kh~~----~~~~g~~~~---------------~~ 291 (350)
T 3b0p_A 235 LEEADRRVFGLPRRPSRLEVARRMRAYLEEEVL-KGT---PPWAVLRHML----NLFRGRPKG---------------RL 291 (350)
T ss_dssp GTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHH-HTC---CHHHHHTTST----TTTTTSTTH---------------HH
T ss_pred HHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHH-cCc---cHHHHHHHHH----HHHccCCCH---------------HH
Confidence 9999875332 45667777777777776555 353 6888999987 777887765 12
Q ss_pred CCchHhHhhcCCCHHHHHHHHHHHcC
Q 009196 492 GRDDLETLMASDSAADWIRISEMLLG 517 (540)
Q Consensus 492 ~r~~le~l~~s~~~~d~~ki~e~~l~ 517 (540)
.| ..|+...+.+++.++++.+..
T Consensus 292 ~r---~~l~~~~~~~~~~~~l~~~~~ 314 (350)
T 3b0p_A 292 WR---RLLSEGRSLQALDRALRLMEE 314 (350)
T ss_dssp HH---HHHHHHCSHHHHHHHHHHHHH
T ss_pred HH---HHHHCCCCHHHHHHHHHHHhh
Confidence 24 677888999999999988863
No 3
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=3.3e-38 Score=332.43 Aligned_cols=246 Identities=10% Similarity=0.083 Sum_probs=210.3
Q ss_pred CCCCcccccCcccCCcEEEccCCCC-------CCHHHHHHHHHhCCCEEEeccceechhccCCh-----------hhhhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV-------GNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SEWAL 234 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v-------tdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~-----------~e~~l 234 (540)
..|.|.+++.+.|+||++||||+++ |+.++|+++++.|+++++||++.+.+...+.. ..|+.
T Consensus 10 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~ 89 (377)
T 2r14_A 10 GLFTPLQLGSLSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYVYTPGIWTDAQEAGWKG 89 (377)
T ss_dssp CTTSCEEETTEEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHH
T ss_pred hcCCCeeECCEEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCCCCcccCCHHHHHHHHH
Confidence 4789999999999999999999987 88999999999999999999999876544321 13555
Q ss_pred h--hcccCCCeEEEEecCC-------------------------------------------cH------------HHHH
Q 009196 235 L--RRHSSEDLFGVQICGA-------------------------------------------YP------------DTLA 257 (540)
Q Consensus 235 l--~~~~~e~p~~vQL~G~-------------------------------------------~p------------~~~a 257 (540)
+ ..|..+.++++||++. .| ++|+
T Consensus 90 l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~ 169 (377)
T 2r14_A 90 VVEAVHAKGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYR 169 (377)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHH
Confidence 5 4788999999999961 23 7999
Q ss_pred HHHHHHHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCC-CC---
Q 009196 258 RTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-YF--- 323 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G-~~--- 323 (540)
+||+++. ++|||+||||+|| |..+.++++||++|++|++++.+||++|+++++ .||+||++.. +.
T Consensus 170 ~aA~~a~-~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~ 248 (377)
T 2r14_A 170 QAAQRAK-RAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGL 248 (377)
T ss_dssp HHHHHHH-HHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTC
T ss_pred HHHHHHH-HcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCC
Confidence 9999997 7899999999997 999999999999999999999999999999984 3999999974 21
Q ss_pred ---CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 324 ---EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 324 ---e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
.+.+++.++++.|+++|+++|+||+|+..+.+.+ .+|++++++++.+ ++|||+||+| +++++.++++. ++||
T Consensus 249 ~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~--~iPvi~~Ggi-~~~~a~~~l~~-g~aD 323 (377)
T 2r14_A 249 TDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRF--KGGLIYCGNY-DAGRAQARLDD-NTAD 323 (377)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT-TSCS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHC--CCCEEEECCC-CHHHHHHHHHC-CCce
Confidence 1245788999999999999999999876544433 3789999999999 7999999999 79999999986 7799
Q ss_pred eeeecHHHHhCCCchHHHHhcCCC
Q 009196 401 SCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 401 gVMIGRgaL~nPwif~eik~~~~~ 424 (540)
+||+||++|.||||+.++++++.+
T Consensus 324 ~V~igR~~l~~P~l~~k~~~g~~l 347 (377)
T 2r14_A 324 AVAFGRPFIANPDLPERFRLGAAL 347 (377)
T ss_dssp EEEESHHHHHCTTHHHHHHHTCCC
T ss_pred EEeecHHHHhCchHHHHHHcCCCC
Confidence 999999999999999999988765
No 4
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=2.1e-37 Score=321.52 Aligned_cols=245 Identities=12% Similarity=0.119 Sum_probs=206.1
Q ss_pred CCCCcccccCcccCCcEEEccCCCCCC---------HHHHHHHH--HhCCCEEEeccceechhccCCh-----------h
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVGN---------LPFRRVCK--VLGADVTCGEMAMCTNLLQGQA-----------S 230 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vtd---------lpfR~l~~--~~Gadl~~TEmi~a~~l~~g~~-----------~ 230 (540)
..|.|.++++++|+||++||||++++. ..++++.+ +.|+++++|||+.+.+...+.. .
T Consensus 4 ~Lf~p~~ig~~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~ 83 (338)
T 1z41_A 4 KLFTPITIKDMTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIE 83 (338)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHH
T ss_pred ccCCCeeECCEEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHH
Confidence 378899999999999999999998742 33333333 2599999999998876543321 1
Q ss_pred hhhhh--hcccCCCeEEEEecCC-----------------------cH------------HHHHHHHHHHHHhCCCCEEE
Q 009196 231 EWALL--RRHSSEDLFGVQICGA-----------------------YP------------DTLARTVELIDQQCTVDFID 273 (540)
Q Consensus 231 e~~ll--~~~~~e~p~~vQL~G~-----------------------~p------------~~~a~AA~~~~~~aG~D~ID 273 (540)
.|+.+ ..|..+.++++||++. .| ++|++||+++. ++|||+||
T Consensus 84 ~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~-~aGfDgVe 162 (338)
T 1z41_A 84 GFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAK-EAGFDVIE 162 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHH-HTTCSEEE
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHH-HcCCCEEE
Confidence 35444 4688899999999974 22 78999999998 79999999
Q ss_pred ecCCC---------CCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC------CCCCChhHHHHHHHHHHH
Q 009196 274 INMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT------GYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 274 IN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~------G~~e~~~~~~~la~~lee 338 (540)
||+|| |..+.+++.||++|++|++++.+||++|++++++||+||++. || +.+++.++++.|++
T Consensus 163 ih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~--~~~~~~~~a~~l~~ 240 (338)
T 1z41_A 163 IHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGL--DIADHIGFAKWMKE 240 (338)
T ss_dssp EEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSC--CHHHHHHHHHHHHH
T ss_pred eccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCC--CHHHHHHHHHHHHH
Confidence 99997 999999999999999999999999999999999999999998 44 34678999999999
Q ss_pred cCCcEEEEeccccc-Cc-cCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 339 WGASAVTVHGRTRQ-QR-YSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 339 aGvdaItVHgRtr~-q~-y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
+|+++|+||+++.. +. ..++ .+|++++++++.+ ++|||++|+|.|++++.++++. ++||+||+||+++.|||++
T Consensus 241 ~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~-G~aD~V~iGR~~i~nPdl~ 317 (338)
T 1z41_A 241 QGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQN-GRADLIFIGRELLRDPFFA 317 (338)
T ss_dssp TTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHT-TSCSEEEECHHHHHCTTHH
T ss_pred cCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHc-CCceEEeecHHHHhCchHH
Confidence 99999999998743 21 2233 4789999999999 7999999999999999999985 6699999999999999999
Q ss_pred HHHHhcCC
Q 009196 416 TEIKEQRH 423 (540)
Q Consensus 416 ~eik~~~~ 423 (540)
.+++++..
T Consensus 318 ~ki~~~~~ 325 (338)
T 1z41_A 318 RTAAKQLN 325 (338)
T ss_dssp HHHHHHTT
T ss_pred HHHHcCCC
Confidence 99998754
No 5
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=1.6e-37 Score=325.78 Aligned_cols=245 Identities=12% Similarity=0.165 Sum_probs=211.1
Q ss_pred CCCCcccccCcccCCcEEEccCCCC---------CCHHHHHHHHHhCCCEEEeccceechhccCCh-----------hhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV---------GNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SEW 232 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v---------tdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~-----------~e~ 232 (540)
..|.|.+++.++|+||++||||+++ ++.++|+++++.|+++++|||+.+.+...+.. ..|
T Consensus 4 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 83 (364)
T 1vyr_A 4 KLFTPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYAGAPGLHSPEQIAAW 83 (364)
T ss_dssp STTSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHH
T ss_pred ccCCCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCCCCcccCCHHHHHHH
Confidence 4789999999999999999999976 57899999999999999999999886543321 135
Q ss_pred hhh--hcccCCCeEEEEecC------------------------------------------CcH------------HHH
Q 009196 233 ALL--RRHSSEDLFGVQICG------------------------------------------AYP------------DTL 256 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G------------------------------------------~~p------------~~~ 256 (540)
+.+ ..|..+.++++||++ ..| ++|
T Consensus 84 ~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f 163 (364)
T 1vyr_A 84 KKITAGVHAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDF 163 (364)
T ss_dssp HHHHHHHHHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHH
Confidence 555 478889999999985 123 699
Q ss_pred HHHHHHHHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCC--CCC
Q 009196 257 ARTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG--YFE 324 (540)
Q Consensus 257 a~AA~~~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G--~~e 324 (540)
++||+++. ++|||+||||+|| |..+.+++.||++|++|++++.+||++|+++++ .||+||++.+ |.+
T Consensus 164 ~~aA~~a~-~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~ 242 (364)
T 1vyr_A 164 RQAVANAR-EAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQN 242 (364)
T ss_dssp HHHHHHHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTT
T ss_pred HHHHHHHH-HcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccc
Confidence 99999998 7999999999997 888999999999999999999999999999983 3999999986 432
Q ss_pred ------ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 325 ------GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 325 ------~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
+.+++.++++.|+++|+++|++|+|+..+.+ +..|++++++++.+ ++|||+||+| +++++.++++. ++
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~--~iPvi~~Ggi-t~~~a~~~l~~-g~ 316 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERF--HGVIIGAGAY-TAEKAEDLIGK-GL 316 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT-TS
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHC--CCCEEEECCc-CHHHHHHHHHC-CC
Confidence 3346888999999999999999998754432 24689999999999 7999999999 99999999986 77
Q ss_pred cCeeeecHHHHhCCCchHHHHhcCCC
Q 009196 399 LASCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~eik~~~~~ 424 (540)
||+||+||++|.||||+.++++++.+
T Consensus 317 aD~V~~gR~~l~~P~~~~~~~~g~~l 342 (364)
T 1vyr_A 317 IDAVAFGRDYIANPDLVARLQKKAEL 342 (364)
T ss_dssp CSEEEESHHHHHCTTHHHHHHHTCCC
T ss_pred ccEEEECHHHHhChhHHHHHHcCCCC
Confidence 99999999999999999999998765
No 6
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=1.1e-37 Score=328.26 Aligned_cols=245 Identities=12% Similarity=0.087 Sum_probs=203.5
Q ss_pred CCCCcccccCcccCCcEEEccCCCCC-------CHH---HHHHHHHhCCCEEEeccceechhccCCh-----------hh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVG-------NLP---FRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SE 231 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vt-------dlp---fR~l~~~~Gadl~~TEmi~a~~l~~g~~-----------~e 231 (540)
..|.|.+++++.|+||++||||+++. +.. ||++++ |+++++||++.+.+...+.. ..
T Consensus 15 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~ 92 (376)
T 1icp_A 15 PLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRST--NGGLLIGEATVISETGIGYKDVPGIWTKEQVEA 92 (376)
T ss_dssp GGGSCEEETTEEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCC--TTCEEECCCEECSGGGCCSTTCCBCSSHHHHHH
T ss_pred hcCCCeeECCEEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcC--CeeEEEECceeeccccccCcccCccCCHHHHHH
Confidence 47899999999999999999999874 333 555554 79999999999986544321 13
Q ss_pred hhhh--hcccCCCeEEEEecCC--------------------------------------cH------------HHHHHH
Q 009196 232 WALL--RRHSSEDLFGVQICGA--------------------------------------YP------------DTLART 259 (540)
Q Consensus 232 ~~ll--~~~~~e~p~~vQL~G~--------------------------------------~p------------~~~a~A 259 (540)
|+.+ ..|..+.++++||++. .| ++|++|
T Consensus 93 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~A 172 (376)
T 1icp_A 93 WKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVA 172 (376)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHH
Confidence 5544 5788999999999971 12 699999
Q ss_pred HHHHHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCC-C----C-
Q 009196 260 VELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-Y----F- 323 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G-~----~- 323 (540)
|+++. ++|||+||||+|| |..+.+++.||++|++|++++.+||++|+++++ .||+||++.. + .
T Consensus 173 A~~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~ 251 (376)
T 1icp_A 173 ARNAI-EAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGD 251 (376)
T ss_dssp HHHHH-HTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCC
T ss_pred HHHHH-HcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 99998 7999999999997 999999999999999999999999999999994 3999999974 2 1
Q ss_pred -CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 324 -EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 324 -e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
++..++.++++.|+++|+++|++|+|+..+.+.+..+|++++++++.+ ++|||+||+| +++++.++|+. ++||+|
T Consensus 252 ~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~--~iPvi~~G~i-~~~~a~~~l~~-g~aD~V 327 (376)
T 1icp_A 252 TNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAY--KGTFIVAGGY-DREDGNRALIE-DRADLV 327 (376)
T ss_dssp SCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHC--CSCEEEESSC-CHHHHHHHHHT-TSCSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHc--CCCEEEeCCC-CHHHHHHHHHC-CCCcEE
Confidence 123468899999999999999999987654333335678889999999 7999999999 99999999986 779999
Q ss_pred eecHHHHhCCCchHHHHhcCCC
Q 009196 403 MIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 403 MIGRgaL~nPwif~eik~~~~~ 424 (540)
|+||++|.||||+.+++++..+
T Consensus 328 ~~gR~~l~~P~l~~k~~~g~~l 349 (376)
T 1icp_A 328 AYGRLFISNPDLPKRFELNAPL 349 (376)
T ss_dssp EESHHHHHCTTHHHHHHHTCCC
T ss_pred eecHHHHhCccHHHHHHcCCCC
Confidence 9999999999999999988765
No 7
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=6e-37 Score=321.54 Aligned_cols=245 Identities=9% Similarity=0.047 Sum_probs=209.3
Q ss_pred CCCCcccccCcccCCcEEEccCCCCC---------CHHHHHHHHHhCCCEEEeccceechhccCCh-----------hhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVG---------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SEW 232 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vt---------dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~-----------~e~ 232 (540)
..|.|.+++++.|+||++||||+++. +.++|+++++.|+++++|||+.+.+...+.. ..|
T Consensus 4 ~Lf~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~ 83 (365)
T 2gou_A 4 SLFQPITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGW 83 (365)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHH
T ss_pred ccCCCeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCCCCCccCCHHHHHHH
Confidence 47889999999999999999999874 6899999999999999999999886544321 135
Q ss_pred hhh--hcccCCCeEEEEecC------------------------------------------CcH------------HHH
Q 009196 233 ALL--RRHSSEDLFGVQICG------------------------------------------AYP------------DTL 256 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G------------------------------------------~~p------------~~~ 256 (540)
+.+ ..|..+.++++||++ ..| ++|
T Consensus 84 ~~l~~~vh~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f 163 (365)
T 2gou_A 84 RIVTEAVHAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADY 163 (365)
T ss_dssp HHHHHHHHHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHH
Confidence 555 478889999999985 123 799
Q ss_pred HHHHHHHHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhcccccc-cEEEEecC-CCC--
Q 009196 257 ARTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDK-PITIKVRT-GYF-- 323 (540)
Q Consensus 257 a~AA~~~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~i-PVtVKiR~-G~~-- 323 (540)
++||+++. ++|||+||||+|| |..+.+++.||++|++|++++.+||++|+++++. ||+||++. ++.
T Consensus 164 ~~aA~~a~-~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~ 242 (365)
T 2gou_A 164 RQAALNAM-EAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNG 242 (365)
T ss_dssp HHHHHHHH-HTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTS
T ss_pred HHHHHHHH-HcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCC
Confidence 99999998 7999999999998 8889999999999999999999999999999843 99999998 432
Q ss_pred ----CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 324 ----EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 324 ----e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.+.+++.++++.|+++|+++|++|+++.... ....|++++++++.+ ++|||+||+| +++++.++++. ++|
T Consensus 243 ~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~~~~~~~~i~~~~--~iPvi~~Ggi-~~~~a~~~l~~-g~a 316 (365)
T 2gou_A 243 TVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDA--PDTPVSFKRALREAY--QGVLIYAGRY-NAEKAEQAIND-GLA 316 (365)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBC--CCCCHHHHHHHHHHC--CSEEEEESSC-CHHHHHHHHHT-TSC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCC--CCccHHHHHHHHHHC--CCcEEEeCCC-CHHHHHHHHHC-CCc
Confidence 1335788999999999999999999864311 113588999999999 7999999999 99999999986 679
Q ss_pred CeeeecHHHHhCCCchHHHHhcCCC
Q 009196 400 ASCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 400 DgVMIGRgaL~nPwif~eik~~~~~ 424 (540)
|+||+||+++.||||+.+++++..+
T Consensus 317 D~V~igR~~i~~P~l~~~~~~g~~l 341 (365)
T 2gou_A 317 DMIGFGRPFIANPDLPERLRHGYPL 341 (365)
T ss_dssp SEEECCHHHHHCTTHHHHHHHTCCC
T ss_pred ceehhcHHHHhCchHHHHHHcCCCC
Confidence 9999999999999999999988764
No 8
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=3.6e-37 Score=327.02 Aligned_cols=245 Identities=11% Similarity=0.076 Sum_probs=206.0
Q ss_pred CCCCcccccCcccCCcEEEccCCCCC---CHH-------HHHHHHHhCCCEEEeccceechhccCCh-----------hh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVG---NLP-------FRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SE 231 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vt---dlp-------fR~l~~~~Gadl~~TEmi~a~~l~~g~~-----------~e 231 (540)
..|.|.+++.+.|+||++||||+++. +.| ||++++ |+++++||++.+.+...+.. ..
T Consensus 17 ~Lf~P~~ig~~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~ 94 (402)
T 2hsa_B 17 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFPHVPGIFTKEQVRE 94 (402)
T ss_dssp CTTSCEEETTEEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCSTTCCBCSSHHHHHH
T ss_pred hcCCCeeECCEEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCCCCcccCCHHHHHH
Confidence 58999999999999999999999875 344 444443 69999999999886543321 13
Q ss_pred hhhh--hcccCCCeEEEEecC----------------------------------------CcH------------HHHH
Q 009196 232 WALL--RRHSSEDLFGVQICG----------------------------------------AYP------------DTLA 257 (540)
Q Consensus 232 ~~ll--~~~~~e~p~~vQL~G----------------------------------------~~p------------~~~a 257 (540)
|+.+ ..|..+.++++||++ ..| +.|+
T Consensus 95 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~ 174 (402)
T 2hsa_B 95 WKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYR 174 (402)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHH
Confidence 5444 578899999999984 123 7999
Q ss_pred HHHHHHHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCC-CC---
Q 009196 258 RTVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-YF--- 323 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G-~~--- 323 (540)
+||+++. ++|||+||||+|| |..|.+++.||++|++|++++.+||++|+++++ .||+||++.+ |.
T Consensus 175 ~AA~~a~-~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~ 253 (402)
T 2hsa_B 175 RSALNAI-EAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDA 253 (402)
T ss_dssp HHHHHHH-HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTC
T ss_pred HHHHHHH-HcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCC
Confidence 9999998 7999999999997 999999999999999999999999999999984 5999999985 21
Q ss_pred -C--ChhHHHHHHHHHHHcC------CcEEEEecccccCccCCC--------cCHHHHHHHHHHcCCCceEEEeCCCCCH
Q 009196 324 -E--GKNRIDSLIADIGTWG------ASAVTVHGRTRQQRYSKL--------ADWDYIYQCARKASDDLQVLGNGDIYSY 386 (540)
Q Consensus 324 -e--~~~~~~~la~~leeaG------vdaItVHgRtr~q~y~g~--------adw~~I~~i~~~~~~~IPVIgNGdI~s~ 386 (540)
+ +.+++.++++.|+++| +++|+||+|+..+.+..+ .+|++++++++.+ ++|||+||+| ++
T Consensus 254 ~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~--~iPvi~~G~i-~~ 330 (402)
T 2hsa_B 254 MDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY--QGTFICSGGY-TR 330 (402)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC--SSCEEEESSC-CH
T ss_pred CCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC--CCCEEEeCCC-CH
Confidence 1 2356899999999999 999999998765533222 3688999999999 7999999999 99
Q ss_pred HHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCC
Q 009196 387 LDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 387 eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~ 424 (540)
+++.++|++ ++||+||+||++|.||||+.+++++..+
T Consensus 331 ~~a~~~l~~-g~aD~V~igR~~l~dP~l~~k~~~g~~l 367 (402)
T 2hsa_B 331 ELGIEAVAQ-GDADLVSYGRLFISNPDLVMRIKLNAPL 367 (402)
T ss_dssp HHHHHHHHT-TSCSEEEESHHHHHCTTHHHHHHHTCCC
T ss_pred HHHHHHHHC-CCCceeeecHHHHhCchHHHHHHhCCCC
Confidence 999999986 7799999999999999999999998765
No 9
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=2.3e-35 Score=306.75 Aligned_cols=247 Identities=12% Similarity=0.069 Sum_probs=204.2
Q ss_pred CCCCcccccCcccCCcEEEccCCCCC---------CHHHHHHHHH--hCCCEEEeccceechhccCChh-----------
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVG---------NLPFRRVCKV--LGADVTCGEMAMCTNLLQGQAS----------- 230 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vt---------dlpfR~l~~~--~Gadl~~TEmi~a~~l~~g~~~----------- 230 (540)
..|.|.++++++|+||++||||++.. +....++.++ .|+++++||.+.+.+-.++...
T Consensus 4 ~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~ 83 (340)
T 3gr7_A 4 MLFSPYTIRGLTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIA 83 (340)
T ss_dssp STTSCEEETTEEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHH
T ss_pred hcCCCEeECCEEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHH
Confidence 47899999999999999999998642 3344444443 5899999999988875443321
Q ss_pred hhhhh--hcccCCCeEEEEecCCc-----------------------------------HHHHHHHHHHHHHhCCCCEEE
Q 009196 231 EWALL--RRHSSEDLFGVQICGAY-----------------------------------PDTLARTVELIDQQCTVDFID 273 (540)
Q Consensus 231 e~~ll--~~~~~e~p~~vQL~G~~-----------------------------------p~~~a~AA~~~~~~aG~D~ID 273 (540)
.|+.+ ..|..+.++++||++.. .++|++||+++. ++|||+||
T Consensus 84 ~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~-~aGfDgVE 162 (340)
T 3gr7_A 84 GLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAK-EAGFDVIE 162 (340)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHH-HHTCSEEE
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH-HcCCCEEE
Confidence 23333 46888999999998521 368999999998 78999999
Q ss_pred ecCCC---------CCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCC----CChhHHHHHHHHHHHcC
Q 009196 274 INMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYF----EGKNRIDSLIADIGTWG 340 (540)
Q Consensus 274 IN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~----e~~~~~~~la~~leeaG 340 (540)
||+|| |..|.+++.||++|++|++++.+||++|+++++.||+||++..-. .+.+++.++++.|+++|
T Consensus 163 ih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~G 242 (340)
T 3gr7_A 163 IHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQG 242 (340)
T ss_dssp EEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTT
T ss_pred EccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcC
Confidence 99995 999999999999999999999999999999999999999997411 13568899999999999
Q ss_pred CcEEEEec-ccccCc-cCC-CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHH
Q 009196 341 ASAVTVHG-RTRQQR-YSK-LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTE 417 (540)
Q Consensus 341 vdaItVHg-Rtr~q~-y~g-~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~e 417 (540)
+|+|+||. ++..+. +.+ ..+|++++++++.+ ++|||++|+|.|++++.++++. ++||+||+||++|.||||+.+
T Consensus 243 vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~-G~aD~V~iGR~~lanPdl~~k 319 (340)
T 3gr7_A 243 VDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQN-GRADLVFLGRELLRNPYWPYA 319 (340)
T ss_dssp CCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHT-TSCSEEEECHHHHHCTTHHHH
T ss_pred CCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHC-CCeeEEEecHHHHhCchHHHH
Confidence 99999995 433322 122 24799999999999 7999999999999999999985 669999999999999999999
Q ss_pred HHhcCC
Q 009196 418 IKEQRH 423 (540)
Q Consensus 418 ik~~~~ 423 (540)
++++..
T Consensus 320 i~~~l~ 325 (340)
T 3gr7_A 320 AARELG 325 (340)
T ss_dssp HHHHTT
T ss_pred HHHHCC
Confidence 998754
No 10
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1e-34 Score=309.51 Aligned_cols=245 Identities=11% Similarity=0.039 Sum_probs=204.6
Q ss_pred CCCCcccc-cCcccCCcEEEccCCCC--------CCHHHHHHHHHh-CCCEEEeccceechhccCChh-----------h
Q 009196 173 LKTHSREK-KLIDFREKLYLAPLTTV--------GNLPFRRVCKVL-GADVTCGEMAMCTNLLQGQAS-----------E 231 (540)
Q Consensus 173 ~~~~p~e~-~~l~lknrliLAPM~~v--------tdlpfR~l~~~~-Gadl~~TEmi~a~~l~~g~~~-----------e 231 (540)
..|.|.++ ++++|+||++||||++. |+...+++.++. |+++++||.+.+.+..++... .
T Consensus 26 ~Lf~P~~i~g~~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~ 105 (419)
T 3l5a_A 26 PLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPG 105 (419)
T ss_dssp GGGSCEECTTSCEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHH
T ss_pred hcCCCEEeCCCCEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHH
Confidence 47899999 89999999999999863 345555555443 799999999998876554321 2
Q ss_pred hhhh--hcccCCCeEEEEecCCc----------------------------------------HHHHHHHHHHHHHhCCC
Q 009196 232 WALL--RRHSSEDLFGVQICGAY----------------------------------------PDTLARTVELIDQQCTV 269 (540)
Q Consensus 232 ~~ll--~~~~~e~p~~vQL~G~~----------------------------------------p~~~a~AA~~~~~~aG~ 269 (540)
|+.+ ..|..+.++++||++.. .++|++||+++. ++||
T Consensus 106 ~k~l~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~-~AGf 184 (419)
T 3l5a_A 106 LTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAI-KAGF 184 (419)
T ss_dssp HHHHHHHHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH-HcCC
Confidence 3322 46888999999998531 268999999998 7999
Q ss_pred CEEEecCCC---------CCcccccCCccccc-cCCchHHHHHHHHhcccc------cccEEEEecC--------CCCCC
Q 009196 270 DFIDINMGC---------PIDIVVNKGAGSCL-LTKPMRMKGIIEATSGTV------DKPITIKVRT--------GYFEG 325 (540)
Q Consensus 270 D~IDIN~GC---------P~~~v~~~G~GsaL-l~~p~~l~eIv~av~~~v------~iPVtVKiR~--------G~~e~ 325 (540)
|+||||+|| |..|.+++.||+++ ++|++++.+||++|++++ ++||+||++. |+ +
T Consensus 185 DgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~--~ 262 (419)
T 3l5a_A 185 DGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGY--T 262 (419)
T ss_dssp SEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEE--C
T ss_pred CEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCC--C
Confidence 999999998 99999999999999 999999999999999987 5799999987 44 3
Q ss_pred hhHHHHHHHHHHH-cCCcEEEEecccc-----cCccCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 326 KNRIDSLIADIGT-WGASAVTVHGRTR-----QQRYSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 326 ~~~~~~la~~lee-aGvdaItVHgRtr-----~q~y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
.+++.++++.|++ +|+|+|+||+++. .+.+.++ .+|++++.+++.++.++|||+||+|+|++++.++++ .
T Consensus 263 ~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~--~- 339 (419)
T 3l5a_A 263 IDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ--H- 339 (419)
T ss_dssp HHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGG--G-
T ss_pred HHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHH--h-
Confidence 5688999999999 9999999999874 2223343 367889999998854599999999999999999998 4
Q ss_pred cCeeeecHHHHhCCCchHHHHhcCC
Q 009196 399 LASCMIARGALIKPWIFTEIKEQRH 423 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~eik~~~~ 423 (540)
||+||+||++|.||+|+.++++++.
T Consensus 340 aDlVaiGR~~IanPdlv~ki~~G~~ 364 (419)
T 3l5a_A 340 ADMVGMSSPFVTEPDFVHKLAEQRP 364 (419)
T ss_dssp CSEEEESTHHHHCTTHHHHHHTTCG
T ss_pred CCcHHHHHHHHHCcHHHHHHHcCCc
Confidence 9999999999999999999998863
No 11
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=2.1e-34 Score=299.92 Aligned_cols=242 Identities=13% Similarity=0.152 Sum_probs=201.3
Q ss_pred CCCCcccccCcccCCcEEEccCCCC--------CCHHHHHHHHH--hCCCEEEeccceechhccCChh-----------h
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV--------GNLPFRRVCKV--LGADVTCGEMAMCTNLLQGQAS-----------E 231 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v--------tdlpfR~l~~~--~Gadl~~TEmi~a~~l~~g~~~-----------e 231 (540)
..|.|.++++++|+||++||||++. ++....++.++ .|+++++||.+.+.+-.++... .
T Consensus 3 ~Lf~P~~ig~~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~ 82 (343)
T 3kru_A 3 ILHMPLKIKDITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKE 82 (343)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHH
T ss_pred cccccceeeeeeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHH
Confidence 3689999999999999999999874 23444444443 5899999999988875543321 2
Q ss_pred hhhh--hcccCCCeEEEEecCCc------------------------------------HHHHHHHHHHHHHhCCCCEEE
Q 009196 232 WALL--RRHSSEDLFGVQICGAY------------------------------------PDTLARTVELIDQQCTVDFID 273 (540)
Q Consensus 232 ~~ll--~~~~~e~p~~vQL~G~~------------------------------------p~~~a~AA~~~~~~aG~D~ID 273 (540)
|+.+ ..|..+.++++||++.. .++|++||+++. ++|||+||
T Consensus 83 ~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~-~aGfDgVE 161 (343)
T 3kru_A 83 LKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRAN-LAGYDVVE 161 (343)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHH-HHTCSEEE
T ss_pred HHHHHHHHhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhcc-ccCCceEE
Confidence 3322 46888999999998521 368999999998 78999999
Q ss_pred ec---------CCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCC-CCC---ChhHHHHHHHHHHH
Q 009196 274 IN---------MGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTG-YFE---GKNRIDSLIADIGT 338 (540)
Q Consensus 274 IN---------~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G-~~e---~~~~~~~la~~lee 338 (540)
|| +.||..|.++++||++|++|++++.+||++|++++ ++||+||++.. |.+ +.+++.++++.|++
T Consensus 162 ih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~ 241 (343)
T 3kru_A 162 IHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKD 241 (343)
T ss_dssp EEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTT
T ss_pred EecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhc
Confidence 99 56999999999999999999999999999999999 68999999973 322 35788999999999
Q ss_pred cCCcEEEE-ecccccCcc--CCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 339 WGASAVTV-HGRTRQQRY--SKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 339 aGvdaItV-HgRtr~q~y--~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
+ +|+|+| ||++..+.. ....+|++++++++.+ ++|||+||+|.+++++.+++++ ++||+||+||++|.||||+
T Consensus 242 ~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~Ae~~l~~-G~aD~V~iGR~~lanPdl~ 317 (343)
T 3kru_A 242 K-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC--NIKTSAVGLITTQELAEEILSN-ERADLVALGRELLRNPYWV 317 (343)
T ss_dssp T-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCEEEEESSCCCHHHHHHHHHT-TSCSEEEESHHHHHCTTHH
T ss_pred c-ccEEeccCCceEeeeecccCceeehHHHHHHHhc--CcccceeeeeeHHHHHHHHHhc-hhhHHHHHHHHHhcCCeEE
Confidence 9 999999 677654321 1225799999999999 7999999999999999999986 6799999999999999999
Q ss_pred HHHH
Q 009196 416 TEIK 419 (540)
Q Consensus 416 ~eik 419 (540)
.+++
T Consensus 318 ~k~~ 321 (343)
T 3kru_A 318 LHTY 321 (343)
T ss_dssp HHTC
T ss_pred EEEe
Confidence 9998
No 12
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=1.2e-33 Score=294.73 Aligned_cols=243 Identities=12% Similarity=0.099 Sum_probs=202.4
Q ss_pred CCCcccccCcccCCcEEEccCCCC--------CCHHHHHHHHH--hCCCEEEeccceechhccCCh-----------hhh
Q 009196 174 KTHSREKKLIDFREKLYLAPLTTV--------GNLPFRRVCKV--LGADVTCGEMAMCTNLLQGQA-----------SEW 232 (540)
Q Consensus 174 ~~~p~e~~~l~lknrliLAPM~~v--------tdlpfR~l~~~--~Gadl~~TEmi~a~~l~~g~~-----------~e~ 232 (540)
.|.|.++++++|+||++||||++. ++....++.++ .|+++++||.+.+.+-.++.. ..|
T Consensus 4 Lf~p~~ig~~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~ 83 (349)
T 3hgj_A 4 LFTPLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGL 83 (349)
T ss_dssp GGSCEEETTEEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHH
T ss_pred CCCCeeECCEEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHH
Confidence 689999999999999999999874 23444555443 589999999998887544332 123
Q ss_pred hhh--hcccCCCeEEEEecCCc---------------------------------------------HHHHHHHHHHHHH
Q 009196 233 ALL--RRHSSEDLFGVQICGAY---------------------------------------------PDTLARTVELIDQ 265 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G~~---------------------------------------------p~~~a~AA~~~~~ 265 (540)
+.+ ..|..+.++++||++.. .++|++||+++.
T Consensus 84 ~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~- 162 (349)
T 3hgj_A 84 KELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRAL- 162 (349)
T ss_dssp HHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHH-
Confidence 333 46888999999998410 368999999998
Q ss_pred hCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC------CCCCChhH
Q 009196 266 QCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT------GYFEGKNR 328 (540)
Q Consensus 266 ~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~------G~~e~~~~ 328 (540)
++|||+||||++| |..+.+++.||++|++|++++.+||++|++++ ++||.||++. || +.++
T Consensus 163 ~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~--~~~~ 240 (349)
T 3hgj_A 163 RAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGW--SLED 240 (349)
T ss_dssp HTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSC--CHHH
T ss_pred HcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCC--CHHH
Confidence 7999999999999 99999999999999999999999999999999 7899999997 34 3467
Q ss_pred HHHHHHHHHHcCCcEEEEe-cccccC--ccCC-CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 329 IDSLIADIGTWGASAVTVH-GRTRQQ--RYSK-LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVH-gRtr~q--~y~g-~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.++++.|+++|+|+|+|| |++... .+.+ ..++++++++++.+ ++|||++|+|.|++++.++++. +.||+||+
T Consensus 241 ~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~~~l~~-G~aD~V~i 317 (349)
T 3hgj_A 241 TLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTPEQAETLLQA-GSADLVLL 317 (349)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCHHHHHHHHHT-TSCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEECCCCCHHHHHHHHHC-CCceEEEe
Confidence 8999999999999999999 454322 1222 25789999999998 7999999999999999999985 56999999
Q ss_pred cHHHHhCCCchHHHHhcC
Q 009196 405 ARGALIKPWIFTEIKEQR 422 (540)
Q Consensus 405 GRgaL~nPwif~eik~~~ 422 (540)
||++|.||+|+.++++..
T Consensus 318 GR~~lanPdl~~k~~~~l 335 (349)
T 3hgj_A 318 GRVLLRDPYFPLRAAKAL 335 (349)
T ss_dssp STHHHHCTTHHHHHHHHT
T ss_pred cHHHHhCchHHHHHHHHC
Confidence 999999999999998764
No 13
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=100.00 E-value=7.6e-34 Score=297.63 Aligned_cols=238 Identities=10% Similarity=0.056 Sum_probs=198.9
Q ss_pred CCCcccccCcccCCcEEEccCCCCC--------CHHHHHHHHHhCCCEEEeccceechhccCChh-----------hhhh
Q 009196 174 KTHSREKKLIDFREKLYLAPLTTVG--------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQAS-----------EWAL 234 (540)
Q Consensus 174 ~~~p~e~~~l~lknrliLAPM~~vt--------dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~-----------e~~l 234 (540)
.|.|.+++.++|+||++||||++.. +...+++.++..+++++||.+.+.+-.++... .|+.
T Consensus 4 Lf~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~ 83 (362)
T 4ab4_A 4 LFDPIKLGDLQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNN 83 (362)
T ss_dssp TTSCEEETTEEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHH
T ss_pred cCCCeeECCEEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHH
Confidence 6899999999999999999998742 34556666655689999999988876544321 2332
Q ss_pred h--hcccCCCeEEEEecCCc------------------------------------------------HHHHHHHHHHHH
Q 009196 235 L--RRHSSEDLFGVQICGAY------------------------------------------------PDTLARTVELID 264 (540)
Q Consensus 235 l--~~~~~e~p~~vQL~G~~------------------------------------------------p~~~a~AA~~~~ 264 (540)
+ ..|..+.++++||++.. .++|++||+++.
T Consensus 84 l~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a~ 163 (362)
T 4ab4_A 84 VTKAVHAAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENAK 163 (362)
T ss_dssp HHHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 2 46888899999997410 257999999998
Q ss_pred HhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCCCC-------CChh
Q 009196 265 QQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTGYF-------EGKN 327 (540)
Q Consensus 265 ~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G~~-------e~~~ 327 (540)
++|||+||||+|| |..|.+++.||++|++|++++.+||++|+++++ .||+||++..-. +..+
T Consensus 164 -~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~ 242 (362)
T 4ab4_A 164 -AAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAE 242 (362)
T ss_dssp -HTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHH
T ss_pred -HcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHH
Confidence 7999999999999 999999999999999999999999999999984 399999996411 1134
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
++.++++.|+++|+|+|+||+++ .++ ++++.+++.+ ++|||+||+| |++++.++++. ++||+||+||+
T Consensus 243 ~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iPvi~~Ggi-t~e~a~~~l~~-g~aD~V~iGR~ 310 (362)
T 4ab4_A 243 TFTYVARELGKRGIAFICSRERE-----ADD---SIGPLIKEAF--GGPYIVNERF-DKASANAALAS-GKADAVAFGVP 310 (362)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCC-----CTT---CCHHHHHHHH--CSCEEEESSC-CHHHHHHHHHT-TSCSEEEESHH
T ss_pred HHHHHHHHHHHhCCCEEEECCCC-----CCH---HHHHHHHHHC--CCCEEEeCCC-CHHHHHHHHHc-CCccEEEECHH
Confidence 68899999999999999999986 122 4578999998 6999999999 99999999986 77999999999
Q ss_pred HHhCCCchHHHHhcCCC
Q 009196 408 ALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 408 aL~nPwif~eik~~~~~ 424 (540)
+|.||||+.+++++.++
T Consensus 311 ~lanPdl~~k~~~g~~l 327 (362)
T 4ab4_A 311 FIANPDLPARLAADAPL 327 (362)
T ss_dssp HHHCTTHHHHHHTTCCC
T ss_pred hHhCcHHHHHHHcCCCC
Confidence 99999999999998765
No 14
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=100.00 E-value=9e-34 Score=296.98 Aligned_cols=240 Identities=11% Similarity=0.049 Sum_probs=200.1
Q ss_pred CCCCCcccccCcccCCcEEEccCCCCC--------CHHHHHHHHHhCCCEEEeccceechhccCChh-----------hh
Q 009196 172 SLKTHSREKKLIDFREKLYLAPLTTVG--------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQAS-----------EW 232 (540)
Q Consensus 172 ~~~~~p~e~~~l~lknrliLAPM~~vt--------dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~-----------e~ 232 (540)
...|.|.++++++|+||++||||++.. +...+++.++..+++++||.+.+.+..++... .|
T Consensus 10 ~~~f~P~~ig~~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~ 89 (361)
T 3gka_A 10 PSLFDPLTIGDLTLANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVTPQGVGYASTPGIWSPEQVDGW 89 (361)
T ss_dssp CCTTSCEEETTEEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHH
T ss_pred ccccCCeeECCEEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeecccccCCCCCCccCCHHHHHHH
Confidence 458999999999999999999998742 34556666555589999999998876544321 23
Q ss_pred hhh--hcccCCCeEEEEecCCc------------------------------------------------HHHHHHHHHH
Q 009196 233 ALL--RRHSSEDLFGVQICGAY------------------------------------------------PDTLARTVEL 262 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G~~------------------------------------------------p~~~a~AA~~ 262 (540)
+.+ ..|..+.++++||++.. .++|++||++
T Consensus 90 k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~ 169 (361)
T 3gka_A 90 RLVTDAVHAAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAEN 169 (361)
T ss_dssp HHHHHHHHHTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHH
Confidence 322 46888899999997410 3689999999
Q ss_pred HHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCC-----CCC--C
Q 009196 263 IDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTG-----YFE--G 325 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G-----~~e--~ 325 (540)
+. ++|||+||||+|| |..|.+++.||++|++|++++.+||++|+++++ .||+||++.. +.+ .
T Consensus 170 A~-~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~ 248 (361)
T 3gka_A 170 AR-AAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDP 248 (361)
T ss_dssp HH-HTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCH
T ss_pred HH-HcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCc
Confidence 98 7999999999999 999999999999999999999999999999984 3999999973 111 1
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
.+++.++++.|+++|+|+|+||+++ .++ ++++.+++.+ ++|||+||+| |++++.++++. ++||+||+|
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~-----~~~---~~~~~ik~~~--~iPvi~~Ggi-t~e~a~~~l~~-G~aD~V~iG 316 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESF-----GGD---AIGQQLKAAF--GGPFIVNENF-TLDSAQAALDA-GQADAVAWG 316 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC-----STT---CCHHHHHHHH--CSCEEEESSC-CHHHHHHHHHT-TSCSEEEES
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCC-----CCH---HHHHHHHHHc--CCCEEEeCCC-CHHHHHHHHHc-CCccEEEEC
Confidence 3568899999999999999999986 122 4678999998 6999999999 99999999986 779999999
Q ss_pred HHHHhCCCchHHHHhcCCC
Q 009196 406 RGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 406 RgaL~nPwif~eik~~~~~ 424 (540)
|++|.||||+.+++++.++
T Consensus 317 R~~ladPdl~~k~~~g~~l 335 (361)
T 3gka_A 317 KLFIANPDLPRRFKLNAPL 335 (361)
T ss_dssp HHHHHCTTHHHHHHHTCCC
T ss_pred HHhHhCcHHHHHHHhCCCC
Confidence 9999999999999998765
No 15
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=100.00 E-value=5.2e-34 Score=322.63 Aligned_cols=244 Identities=11% Similarity=0.064 Sum_probs=204.1
Q ss_pred CCCCcccccCcccCCcEEEccCCCC-C-CHH------HHHHHHHhCCCEEEeccceechhccCCh------------hhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV-G-NLP------FRRVCKVLGADVTCGEMAMCTNLLQGQA------------SEW 232 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v-t-dlp------fR~l~~~~Gadl~~TEmi~a~~l~~g~~------------~e~ 232 (540)
..|.|.++++++|+||++||||++. + +.| |++.+ +.|+++++||++++.+...+.. ..|
T Consensus 8 ~Lf~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~ 86 (729)
T 1o94_A 8 ILFEPIQIGPKTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNL 86 (729)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHH
T ss_pred hcCCCeeECCEEECCccEECCCcCCcCCCCcHHHHHHHHHHh-cCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHH
Confidence 4789999999999999999999885 3 344 33333 4689999999999876443221 134
Q ss_pred hhh--hcccCCCeEEEEecCC---------------------------------------cHHHHHHHHHHHHHhCCCCE
Q 009196 233 ALL--RRHSSEDLFGVQICGA---------------------------------------YPDTLARTVELIDQQCTVDF 271 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G~---------------------------------------~p~~~a~AA~~~~~~aG~D~ 271 (540)
+.+ ..|..+.++++||++. -+++|++||+++. ++|||+
T Consensus 87 ~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~-~aGfDg 165 (729)
T 1o94_A 87 KAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSR-DAGFDI 165 (729)
T ss_dssp HHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHH-HTTCSE
T ss_pred HHHHHHHHhCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH-HcCCCE
Confidence 444 4788899999999983 1379999999998 799999
Q ss_pred EEecCCC---------CCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC-------CCCCChhHHHHHH
Q 009196 272 IDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT-------GYFEGKNRIDSLI 333 (540)
Q Consensus 272 IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~-------G~~e~~~~~~~la 333 (540)
||||++| |..|.+++.||++|++|++++.+||++|++++ ++||+||++. ||+. .+++.+++
T Consensus 166 VEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~-~~~~~~~~ 244 (729)
T 1o94_A 166 VYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEA-EVDGQKFV 244 (729)
T ss_dssp EEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCT-TTHHHHHH
T ss_pred EEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCc-hHHHHHHH
Confidence 9999999 99999999999999999999999999999999 7899999985 4431 34678899
Q ss_pred HHHHHcCCcEEEEeccc--------ccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 334 ADIGTWGASAVTVHGRT--------RQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 334 ~~leeaGvdaItVHgRt--------r~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.|++ |+|+|+||+++ ..+.|.+++ +|++++++++.+ ++|||+||+|.|++++.+++++ ++||+||+
T Consensus 245 ~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~-g~aD~V~~ 320 (729)
T 1o94_A 245 EMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVS--KKPVLGVGRYTDPEKMIEIVTK-GYADIIGC 320 (729)
T ss_dssp HHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTC--SSCEECCSCCCCHHHHHHHHHT-TSCSBEEE
T ss_pred HHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHC--CCEEEEeCCCCCHHHHHHHHHC-CCCCEEEe
Confidence 99988 79999999874 223344444 689999999998 7999999999999999999986 77999999
Q ss_pred cHHHHhCCCchHHHHhcCC
Q 009196 405 ARGALIKPWIFTEIKEQRH 423 (540)
Q Consensus 405 GRgaL~nPwif~eik~~~~ 423 (540)
||++|.||||+.++++++.
T Consensus 321 gR~~l~~P~~~~~~~~g~~ 339 (729)
T 1o94_A 321 ARPSIADPFLPQKVEQGRY 339 (729)
T ss_dssp SHHHHHCTTHHHHHHTTCG
T ss_pred CchhhcCchHHHHHHcCCc
Confidence 9999999999999998864
No 16
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=7.8e-34 Score=317.84 Aligned_cols=245 Identities=13% Similarity=0.044 Sum_probs=204.5
Q ss_pred CCCCcccccCcccCCcEEEccCCC-CCC--HHHHHHHH------HhCCCEEEeccceechhccCCh-----------hhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTT-VGN--LPFRRVCK------VLGADVTCGEMAMCTNLLQGQA-----------SEW 232 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~-vtd--lpfR~l~~------~~Gadl~~TEmi~a~~l~~g~~-----------~e~ 232 (540)
..|.|.++++++|+||++||||++ .++ .++++++. +.|+++++|||+++.+...+.. ..|
T Consensus 4 ~lf~p~~ig~~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~ 83 (671)
T 1ps9_A 4 SLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHH 83 (671)
T ss_dssp TTTCCEECSSCEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHH
T ss_pred ccCCCeeECCEEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHH
Confidence 478999999999999999999998 444 33444333 3589999999998875433221 134
Q ss_pred hhh--hcccCCCeEEEEecCC----------------------cH------------HHHHHHHHHHHHhCCCCEEEecC
Q 009196 233 ALL--RRHSSEDLFGVQICGA----------------------YP------------DTLARTVELIDQQCTVDFIDINM 276 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G~----------------------~p------------~~~a~AA~~~~~~aG~D~IDIN~ 276 (540)
+.+ ..|..+.++++||++. .| ++|++||+++. ++|||+||||+
T Consensus 84 ~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~-~aGfd~veih~ 162 (671)
T 1ps9_A 84 RTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAR-EAGYDGVEVMG 162 (671)
T ss_dssp HHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHH-HTTCSEEEEEE
T ss_pred HHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHH-HcCCCEEEEcc
Confidence 444 4688899999999984 23 78999999998 79999999999
Q ss_pred CC---------CCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC------CCCCChhHHHHHHHHHHHc
Q 009196 277 GC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT------GYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 277 GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~------G~~e~~~~~~~la~~leea 339 (540)
|| |..+.+++.||++|++|++++.+|+++|++++ ++||+||++. |+ +.+++.++++.|+++
T Consensus 163 ~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~--~~~~~~~~a~~l~~~ 240 (671)
T 1ps9_A 163 SEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGG--TFAETVELAQAIEAA 240 (671)
T ss_dssp CBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCC--CHHHHHHHHHHHHHH
T ss_pred ccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCC--CHHHHHHHHHHHHhc
Confidence 97 88999999999999999999999999999999 7899999995 33 346789999999999
Q ss_pred CCcEEEEecccccCc------cCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 340 GASAVTVHGRTRQQR------YSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 340 GvdaItVHgRtr~q~------y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
|+|+|++|+|+..+. +.+++ .+++++++++.+ ++|||++|+|++++++.++++. ++||+||+||+++.||
T Consensus 241 g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~iPvi~~Ggi~~~~~a~~~l~~-g~aD~V~~gR~~l~~P 317 (671)
T 1ps9_A 241 GATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV--SLPLVTTNRINDPQVADDILSR-GDADMVSMARPFLADA 317 (671)
T ss_dssp TCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC--SSCEEECSSCCSHHHHHHHHHT-TSCSEEEESTHHHHCT
T ss_pred CCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc--CceEEEeCCCCCHHHHHHHHHc-CCCCEEEeCHHHHhCc
Confidence 999999998875432 22333 468899999988 7999999999999999999986 6799999999999999
Q ss_pred CchHHHHhcCC
Q 009196 413 WIFTEIKEQRH 423 (540)
Q Consensus 413 wif~eik~~~~ 423 (540)
||+.++++++.
T Consensus 318 ~l~~k~~~g~~ 328 (671)
T 1ps9_A 318 ELLSKAQSGRA 328 (671)
T ss_dssp THHHHHHTTCG
T ss_pred HHHHHHHcCCC
Confidence 99999998753
No 17
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=100.00 E-value=1.3e-33 Score=317.23 Aligned_cols=244 Identities=12% Similarity=0.126 Sum_probs=199.8
Q ss_pred CCCCcccccCcccCCcEEEccCCCCCCH-------HHHHHHHHhCCCEEEeccceechhccCChh------------hhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVGNL-------PFRRVCKVLGADVTCGEMAMCTNLLQGQAS------------EWA 233 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vtdl-------pfR~l~~~~Gadl~~TEmi~a~~l~~g~~~------------e~~ 233 (540)
..|.|.++++++|+||++||||++.... .|+..+.+.|+++++||++++.+..++... .|+
T Consensus 13 ~lf~p~~ig~~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 92 (690)
T 3k30_A 13 VLFEPVQIGPFTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALK 92 (690)
T ss_dssp GGGCCCEETTEECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHH
T ss_pred hcCCCeeECCEEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHH
Confidence 5789999999999999999999976432 355555678999999999998876543221 233
Q ss_pred hh--hcccCCCeEEEEecCCc-----------------------------------------HHHHHHHHHHHHHhCCCC
Q 009196 234 LL--RRHSSEDLFGVQICGAY-----------------------------------------PDTLARTVELIDQQCTVD 270 (540)
Q Consensus 234 ll--~~~~~e~p~~vQL~G~~-----------------------------------------p~~~a~AA~~~~~~aG~D 270 (540)
.+ ..|..+.++++||++.. .++|++||+++. ++|||
T Consensus 93 ~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~-~aGfD 171 (690)
T 3k30_A 93 RIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSI-EAGYD 171 (690)
T ss_dssp HHHHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHH-HHTCS
T ss_pred HHHHHHHhcCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHH-HcCCC
Confidence 22 46888999999999521 389999999998 78999
Q ss_pred EEEecCCCCC----------cccccCCccccccCCchHHHHHHHHhccccc--ccEEEEecC------CCCCChhHHHHH
Q 009196 271 FIDINMGCPI----------DIVVNKGAGSCLLTKPMRMKGIIEATSGTVD--KPITIKVRT------GYFEGKNRIDSL 332 (540)
Q Consensus 271 ~IDIN~GCP~----------~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~--iPVtVKiR~------G~~e~~~~~~~l 332 (540)
+||||+||+. .|.+++.||++|++|++++.+|+++|+++++ +||.||+.. || +.+++.++
T Consensus 172 gVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~--~~~~~~~~ 249 (690)
T 3k30_A 172 IVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGI--TREDIEGV 249 (690)
T ss_dssp EEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSC--CHHHHHHH
T ss_pred EEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCC--CHHHHHHH
Confidence 9999988654 7889999999999999999999999999994 566666632 32 24678999
Q ss_pred HHHHHHcCCcEEEEecccc-----cCccCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 333 IADIGTWGASAVTVHGRTR-----QQRYSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr-----~q~y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
++.|++ |+|+|+||+++. ..++.++ ..|++++.+++.+ ++|||+||+|++++++.+++++ ++||+||+||
T Consensus 250 ~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pvi~~G~i~~~~~a~~~l~~-g~~d~v~~gR 325 (690)
T 3k30_A 250 LRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLT--TKPVVGVGRFTSPDAMVRQIKA-GILDLIGAAR 325 (690)
T ss_dssp HHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGC--SSCEEECSCCCCHHHHHHHHHT-TSCSEEEESH
T ss_pred HHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHc--CCeEEEeCCCCCHHHHHHHHHC-CCcceEEEcH
Confidence 999988 899999998752 2233332 3578899999988 7999999999999999999986 7899999999
Q ss_pred HHHhCCCchHHHHhcCC
Q 009196 407 GALIKPWIFTEIKEQRH 423 (540)
Q Consensus 407 gaL~nPwif~eik~~~~ 423 (540)
++|.||||+.++++++.
T Consensus 326 ~~~~~P~~~~~~~~g~~ 342 (690)
T 3k30_A 326 PSIADPFLPNKIRDGRL 342 (690)
T ss_dssp HHHHCTTHHHHHHTTCG
T ss_pred HhHhCccHHHHHHcCCc
Confidence 99999999999999864
No 18
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=100.00 E-value=9.2e-33 Score=289.49 Aligned_cols=247 Identities=11% Similarity=0.044 Sum_probs=202.5
Q ss_pred CCCCcccccCcccCCcEEEccCCCC-------CCHHHHHHHHH--hCCCEEEeccceechhccCChh-----------hh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV-------GNLPFRRVCKV--LGADVTCGEMAMCTNLLQGQAS-----------EW 232 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v-------tdlpfR~l~~~--~Gadl~~TEmi~a~~l~~g~~~-----------e~ 232 (540)
..|.|.++++++|+||++||||+++ ++....++..+ .|+++++||.+.+.+-.++... .|
T Consensus 3 ~Lf~P~~ig~~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~ 82 (363)
T 3l5l_A 3 ALFEPYTLKDVTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAF 82 (363)
T ss_dssp GGGSCEEETTEEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHH
T ss_pred ccCCCeeECCEEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHH
Confidence 3689999999999999999999974 34555555543 5899999999998875544321 23
Q ss_pred hhh--hcccCCCeEEEEecCCc----------------------------------------------------HHHHHH
Q 009196 233 ALL--RRHSSEDLFGVQICGAY----------------------------------------------------PDTLAR 258 (540)
Q Consensus 233 ~ll--~~~~~e~p~~vQL~G~~----------------------------------------------------p~~~a~ 258 (540)
+.+ ..|..+..+++||++.. .++|++
T Consensus 83 ~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~ 162 (363)
T 3l5l_A 83 VPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVD 162 (363)
T ss_dssp HHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHH
Confidence 322 46888899999998410 257999
Q ss_pred HHHHHHHhCCCCEEEecCC---------CCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCC-CC---
Q 009196 259 TVELIDQQCTVDFIDINMG---------CPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTG-YF--- 323 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~G---------CP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G-~~--- 323 (540)
||+++. ++|||+||||++ ||..|.+++.||++|++|++++.+||++|++++ ++||.||++.. +.
T Consensus 163 aA~~a~-~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 163 AARRAR-DAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHH-HHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHH-HcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 999998 789999999998 699999999999999999999999999999999 58999999863 11
Q ss_pred -CChhHHHHHHHHHHHcCCcEEEEecccccC--c-cCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 324 -EGKNRIDSLIADIGTWGASAVTVHGRTRQQ--R-YSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 324 -e~~~~~~~la~~leeaGvdaItVHgRtr~q--~-y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
.+.+++.++++.|+++|+|+|+||+++... . ..++ .++++++.+++.+ ++|||++|+|.|++++.++++. +.
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~GgI~s~e~a~~~l~~-G~ 318 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA--KLPVTSAWGFGTPQLAEAALQA-NQ 318 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--TCCEEECSSTTSHHHHHHHHHT-TS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHC-CC
Confidence 124578899999999999999999864221 1 1233 4789999999999 7999999999999999999985 66
Q ss_pred cCeeeecHHHHhCCCchHHHHhcCC
Q 009196 399 LASCMIARGALIKPWIFTEIKEQRH 423 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~eik~~~~ 423 (540)
||+||+||++|.||+|+.++++...
T Consensus 319 aD~V~iGR~~lanPdl~~k~~~~lg 343 (363)
T 3l5l_A 319 LDLVSVGRAHLADPHWAYFAAKELG 343 (363)
T ss_dssp CSEEECCHHHHHCTTHHHHHHHHTT
T ss_pred ccEEEecHHHHhCchHHHHHHHHcC
Confidence 9999999999999999999987643
No 19
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=3.3e-32 Score=278.10 Aligned_cols=234 Identities=12% Similarity=0.094 Sum_probs=193.5
Q ss_pred cccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChh----------------------hh-h
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQAS----------------------EW-A 233 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~----------------------e~-~ 233 (540)
+.++.+++|+||+++||.....|.+|++.+.++|+++++|+|++..+.. ++.. .+ .
T Consensus 3 ~~~i~g~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~-gn~~pr~~~~~~~~in~~g~~~~g~~~~~~ 81 (311)
T 1jub_A 3 NTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKRE-GNPLPRYVDLELGSINSMGLPNLGFDYYLD 81 (311)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBC-CSCSCCEEEETTEEEECCCCCBSCHHHHHH
T ss_pred ceEECCEEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccC-CCCCCcEEecccceeecCCCCCccHHHHHH
Confidence 4578899999999999854224899999999999999999999988742 2211 11 1
Q ss_pred hhhcc--cC--CCeEEEEecCCcHHHHHHHHHHHHHhCCCC-EEEecCCCCCcccccCCccccccCCchHHHHHHHHhcc
Q 009196 234 LLRRH--SS--EDLFGVQICGAYPDTLARTVELIDQQCTVD-FIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSG 308 (540)
Q Consensus 234 ll~~~--~~--e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D-~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~ 308 (540)
.+... .. +.|+++||+|.++++|.++|+++. ++|+| +||||++||.. . .|..+..+++.+.++++++++
T Consensus 82 ~~~~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~-~~g~d~~iein~~~P~~----~-g~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 82 YVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQ-ESDFSGITELNLSCPNV----P-GEPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp HHHHHHHHTCSSSCCEEEECCSSHHHHHHHHHHHH-HSCCCSEEEEESCCCCS----S-SCCCGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHHHHH-hcCCCeEEEEeccCCCC----C-CcccccCCHHHHHHHHHHHHH
Confidence 12211 23 689999999999999999999998 68999 99999999996 2 266777899999999999999
Q ss_pred cccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccc-------------------cCccCCCc----CHHHHH
Q 009196 309 TVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTR-------------------QQRYSKLA----DWDYIY 365 (540)
Q Consensus 309 ~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr-------------------~q~y~g~a----dw~~I~ 365 (540)
++++||+||++.++ +..++.++++.++++|+|+|++|+++. .+++++++ .|++++
T Consensus 156 ~~~~Pv~vKi~~~~--~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~ 233 (311)
T 1jub_A 156 FFTKPLGVKLPPYF--DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVR 233 (311)
T ss_dssp TCCSCEEEEECCCC--SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHH
T ss_pred hcCCCEEEEECCCC--CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHH
Confidence 99999999999987 345788899999999999999999861 12344543 488999
Q ss_pred HHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh-CCCchHHHHhc
Q 009196 366 QCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI-KPWIFTEIKEQ 421 (540)
Q Consensus 366 ~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~-nPwif~eik~~ 421 (540)
++++.++.++|||++|||.|++|+.+++. .|||+|||||+++. +||+|.+++++
T Consensus 234 ~v~~~~~~~ipvi~~GGI~~~~da~~~l~--~GAd~V~vg~~~l~~~p~~~~~i~~~ 288 (311)
T 1jub_A 234 AFYTRLKPEIQIIGTGGIETGQDAFEHLL--CGATMLQIGTALHKEGPAIFDRIIKE 288 (311)
T ss_dssp HHHTTSCTTSEEEEESSCCSHHHHHHHHH--HTCSEEEECHHHHHHCTHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEECCCCCHHHHHHHHH--cCCCEEEEchHHHhcCcHHHHHHHHH
Confidence 99998854699999999999999999996 68999999999996 99999998753
No 20
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.98 E-value=4.6e-32 Score=287.44 Aligned_cols=248 Identities=11% Similarity=0.098 Sum_probs=200.0
Q ss_pred CCCCcccccCcccCCcEEEccCCCC--------CCHHHHHHHHHh--CCCEEEeccceechhccCChh------------
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV--------GNLPFRRVCKVL--GADVTCGEMAMCTNLLQGQAS------------ 230 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v--------tdlpfR~l~~~~--Gadl~~TEmi~a~~l~~g~~~------------ 230 (540)
..|.|.++++++|+||++||||++. ++...+++..+. |+++++||.+.+.+-.++...
T Consensus 13 ~Lf~P~~ig~~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~ 92 (407)
T 3tjl_A 13 EAFQSIKVGNNTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAK 92 (407)
T ss_dssp GGGSCEEETTEEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHH
T ss_pred cCCCCeeECCEEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHH
Confidence 5789999999999999999999863 345566666553 799999999988875544322
Q ss_pred hhhhh--hcccCCCeEEEEecCCc-------------------------------------------------HHH-HHH
Q 009196 231 EWALL--RRHSSEDLFGVQICGAY-------------------------------------------------PDT-LAR 258 (540)
Q Consensus 231 e~~ll--~~~~~e~p~~vQL~G~~-------------------------------------------------p~~-~a~ 258 (540)
.|+.+ ..|..+.++++||++.. .++ |++
T Consensus 93 ~~k~l~~avH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~ 172 (407)
T 3tjl_A 93 AWKVITDKVHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTN 172 (407)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHH
Confidence 23322 46888999999998521 135 999
Q ss_pred HHHHHHHhCCCCEEEecCCC---------CCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCCCCC----
Q 009196 259 TVELIDQQCTVDFIDINMGC---------PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTGYFE---- 324 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GC---------P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G~~e---- 324 (540)
||+++. ++|||+||||+|| |..|.++|.||++|++|++++.+||++|+++++ .||+||++. |+.
T Consensus 173 aa~~a~-~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~-~~~~~g~ 250 (407)
T 3tjl_A 173 AAQKAM-DAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISP-WATFQNM 250 (407)
T ss_dssp HHHHHH-HTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TCCGGGC
T ss_pred HHHHHH-HhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECc-ccccCCC
Confidence 999998 7999999999999 999999999999999999999999999999984 489999886 221
Q ss_pred ----C----hhHHHHHHHHH---HHcC--CcEEEEe-cccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHH
Q 009196 325 ----G----KNRIDSLIADI---GTWG--ASAVTVH-GRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDW 389 (540)
Q Consensus 325 ----~----~~~~~~la~~l---eeaG--vdaItVH-gRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa 389 (540)
+ ......+++.| ++.| +++|+|| +|+..+.+..+. .|..+..+++.+ ++|||+||||.+.+++
T Consensus 251 ~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~PvI~~Ggi~~~~dA 328 (407)
T 3tjl_A 251 KAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIW--KGVILKAGNYSYDAPE 328 (407)
T ss_dssp CGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHC--CSEEEEESCGGGGTTT
T ss_pred cccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHh--CCCEEecCCCCCHHHH
Confidence 2 35678899999 8899 9999999 776554443322 356678888888 6899999999999877
Q ss_pred HHHHhc--CCCcCeeeecHHHHhCCCchHHHHhcCCC
Q 009196 390 NKHKSD--CPELASCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 390 ~~~l~~--~~gaDgVMIGRgaL~nPwif~eik~~~~~ 424 (540)
.++++. .++||+||+||++|.||||+.+++++.++
T Consensus 329 ~~~i~~~~~g~aDlVa~GR~~iaNPdL~~ri~~g~~l 365 (407)
T 3tjl_A 329 FKTLKEDIADKRTLVGFSRYFTSNPNLVWKLRDGIDL 365 (407)
T ss_dssp THHHHHHHTTSSEEEECSHHHHHCTTHHHHHHHTCCB
T ss_pred HHHHHhhccCCCeEEEeChhhhhCchHHHHHHcCCCC
Confidence 666552 15799999999999999999999998764
No 21
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.97 E-value=2.4e-31 Score=272.09 Aligned_cols=234 Identities=13% Similarity=0.096 Sum_probs=192.3
Q ss_pred cccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhcc-------------------CCh--hhh-hh
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQ-------------------GQA--SEW-AL 234 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~-------------------g~~--~e~-~l 234 (540)
+.++.+++|+||+++|+++-..+..+++.+.++|+++++|+|++..+... .+. ..+ ..
T Consensus 5 ~~~i~g~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~ 84 (314)
T 2e6f_A 5 KLNLLDHVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKY 84 (314)
T ss_dssp CEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHH
T ss_pred ceEECCEecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHH
Confidence 45788999999999999773257888888889999999999999887321 011 111 11
Q ss_pred hhc--ccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCC---EEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc
Q 009196 235 LRR--HSSEDLFGVQICGAYPDTLARTVELIDQQCTVD---FIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT 309 (540)
Q Consensus 235 l~~--~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D---~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~ 309 (540)
+.. ...+.|+++||.|.++++|.++|+++. ++|+| +||||++||.. . .|..+..+++.+.+++++++++
T Consensus 85 ~~~~~~~~~~p~~~~i~g~~~~~~~~~a~~~~-~~g~d~~~~iein~~~P~~----~-g~~~~g~~~~~~~~ii~~vr~~ 158 (314)
T 2e6f_A 85 ASDLHDYSKKPLFLSISGLSVEENVAMVRRLA-PVAQEKGVLLELNLSCPNV----P-GKPQVAYDFEAMRTYLQQVSLA 158 (314)
T ss_dssp HHHTCCTTTCCEEEEECCSSHHHHHHHHHHHH-HHHHHHCCEEEEECCCCCS----T-TCCCGGGSHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCCcEEEEeCCCCHHHHHHHHHHHH-HhCCCcCceEEEEcCCCCC----C-CchhhcCCHHHHHHHHHHHHHh
Confidence 222 224689999999999999999999998 67999 99999999996 2 2566777999999999999999
Q ss_pred ccccEEEEecCCCCCChhHHHHHHHHHHHcC-CcEEEEecccc-------------------cCccCCCc----CHHHHH
Q 009196 310 VDKPITIKVRTGYFEGKNRIDSLIADIGTWG-ASAVTVHGRTR-------------------QQRYSKLA----DWDYIY 365 (540)
Q Consensus 310 v~iPVtVKiR~G~~e~~~~~~~la~~leeaG-vdaItVHgRtr-------------------~q~y~g~a----dw~~I~ 365 (540)
+++||+||++.++ +..++.++++.++++| +|+|++|+++. .+++++++ .|++++
T Consensus 159 ~~~Pv~vK~~~~~--~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~ 236 (314)
T 2e6f_A 159 YGLPFGVKMPPYF--DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVN 236 (314)
T ss_dssp HCSCEEEEECCCC--CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHH
T ss_pred cCCCEEEEECCCC--CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHH
Confidence 8999999999987 3567888999999999 99999999871 12334433 489999
Q ss_pred HHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh-CCCchHHHHhc
Q 009196 366 QCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI-KPWIFTEIKEQ 421 (540)
Q Consensus 366 ~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~-nPwif~eik~~ 421 (540)
++++.++ ++|||++|||.|++|+.+++. .|||+|||||+++. +||+|.+++++
T Consensus 237 ~v~~~~~-~ipvi~~GGI~~~~da~~~l~--~GAd~V~ig~~~l~~~p~~~~~i~~~ 290 (314)
T 2e6f_A 237 AFYRRCP-DKLVFGCGGVYSGEDAFLHIL--AGASMVQVGTALQEEGPGIFTRLEDE 290 (314)
T ss_dssp HHHHHCT-TSEEEEESSCCSHHHHHHHHH--HTCSSEEECHHHHHHCTTHHHHHHHH
T ss_pred HHHHhcC-CCCEEEECCCCCHHHHHHHHH--cCCCEEEEchhhHhcCcHHHHHHHHH
Confidence 9999884 799999999999999999996 68999999999996 99999999753
No 22
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.97 E-value=3.9e-31 Score=278.74 Aligned_cols=244 Identities=9% Similarity=0.045 Sum_probs=197.2
Q ss_pred CCCCcccccCcccCCcEEEccCCCCC----------CHHHHHHHHHhCCCEEEeccceechhccCCh-----------hh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVG----------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQA-----------SE 231 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vt----------dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~-----------~e 231 (540)
..|.|.++++++|+||++||||++.. +....++.++.|+++++||.+.+.+-.++.. ..
T Consensus 6 ~Lf~P~~ig~~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~ 85 (379)
T 3aty_A 6 ELLRPLKLGRYTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEE 85 (379)
T ss_dssp TTTSCEEETTEEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTTSSEEEEEEEESSTTCCSSSSCCBSSSHHHHHH
T ss_pred hcCCCeeECCEEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhCCCeEEECceecccccccCCCCCCcCCHHHHHH
Confidence 47999999999999999999998642 4455666666699999999998877544432 12
Q ss_pred hhhh--hcccCCCeEEEEecC-----------------------------------------------------------
Q 009196 232 WALL--RRHSSEDLFGVQICG----------------------------------------------------------- 250 (540)
Q Consensus 232 ~~ll--~~~~~e~p~~vQL~G----------------------------------------------------------- 250 (540)
|+.+ ..|..+.++++||++
T Consensus 86 ~k~~~~avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr~lt~ 165 (379)
T 3aty_A 86 WRKIVDAVHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTD 165 (379)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCEECCH
T ss_pred HHHHHHHHHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCccCCH
Confidence 3322 467778888888853
Q ss_pred -----CcHHHHHHHHHHHHHhCCCCEEEecCCC---------CCcccc-cCCccc-cccCCchHHHHHHHHhccccc-cc
Q 009196 251 -----AYPDTLARTVELIDQQCTVDFIDINMGC---------PIDIVV-NKGAGS-CLLTKPMRMKGIIEATSGTVD-KP 313 (540)
Q Consensus 251 -----~~p~~~a~AA~~~~~~aG~D~IDIN~GC---------P~~~v~-~~G~Gs-aLl~~p~~l~eIv~av~~~v~-iP 313 (540)
.-+++|++||+++..++|||+||||+|| |..+.+ ++.||+ +|++|++++.+||++|+++++ .|
T Consensus 166 ~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~ 245 (379)
T 3aty_A 166 DEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDR 245 (379)
T ss_dssp HHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCe
Confidence 1134677899888635899999999997 888889 999999 999999999999999999984 48
Q ss_pred EEEEecCC-CC------CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCH
Q 009196 314 ITIKVRTG-YF------EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSY 386 (540)
Q Consensus 314 VtVKiR~G-~~------e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~ 386 (540)
|.||++.. +. .+.+++.++++.|+++|+++|++|+++.... . ..++ ++++++.+ ++|||+||+| ++
T Consensus 246 v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~--~-~~~~-~~~ir~~~--~iPvi~~G~i-t~ 318 (379)
T 3aty_A 246 VGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQ--Q-IGDV-VAWVRGSY--SGVKISNLRY-DF 318 (379)
T ss_dssp EEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSC--C-CCCH-HHHHHTTC--CSCEEEESSC-CH
T ss_pred EEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCC--C-ccHH-HHHHHHHC--CCcEEEECCC-CH
Confidence 99999972 21 1345788999999999999999999763211 1 1236 88999988 7999999999 99
Q ss_pred HHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCC
Q 009196 387 LDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 387 eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~ 424 (540)
+++.++++. ++||+||+||++|.||||+.+++++..+
T Consensus 319 ~~a~~~l~~-g~aD~V~igR~~l~~P~l~~k~~~g~~l 355 (379)
T 3aty_A 319 EEADQQIRE-GKVDAVAFGAKFIANPDLVERAQQNWPL 355 (379)
T ss_dssp HHHHHHHHT-TSCSEEEESHHHHHCTTHHHHHHHTCCC
T ss_pred HHHHHHHHc-CCCeEEEecHHHHhCcHHHHHHHcCCCC
Confidence 999999986 7799999999999999999999988765
No 23
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.97 E-value=9.8e-31 Score=270.35 Aligned_cols=231 Identities=15% Similarity=0.142 Sum_probs=186.2
Q ss_pred cccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCCh------------------------hh-
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA------------------------SE- 231 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~------------------------~e- 231 (540)
|.++.+++|+||+++|++.+ .+..|++.+.++|+++++|++++.++.. ++. ..
T Consensus 46 ~~~i~g~~l~npi~~aag~~-~~~~~~~~~a~~G~g~i~~~~~~~~~~~-g~~~pr~~~~~~d~~~in~~g~~~~g~~~~ 123 (336)
T 1f76_A 46 PVNCMGLTFKNPLGLAAGLD-KDGECIDALGAMGFGSIEIGTVTPRPQP-GNDKPRLFRLVDAEGLINRMGFNNLGVDNL 123 (336)
T ss_dssp CEEETTEEESSSEEECTTSS-TTCCCHHHHHHTTCSEEEEEEECSSCBC-CSCSCCEEEETTTTEEEECCCCCBCCHHHH
T ss_pred CeEECCEEcCCCcEeCcccC-CcHHHHHHHHHcCccEEEeCCCCCCCCC-CCCCcceeeccccceeeecCCCCCcCHHHH
Confidence 56888999999999997532 2233777788899999999999877531 110 00
Q ss_pred hhhhhcccCCCeEEEEecCCc-------HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHH
Q 009196 232 WALLRRHSSEDLFGVQICGAY-------PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIE 304 (540)
Q Consensus 232 ~~ll~~~~~e~p~~vQL~G~~-------p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~ 304 (540)
...+.....+.|+++||+++. +++|+++++++. . |+|+||||++||..+ |..++++++++.++++
T Consensus 124 ~~~~~~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~-~-g~d~iein~~sP~~~------g~~~~~~~~~~~~il~ 195 (336)
T 1f76_A 124 VENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIY-A-YAGYIAINISSPNTP------GLRTLQYGEALDDLLT 195 (336)
T ss_dssp HHHHHHCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHG-G-GCSEEEEECCCSSST------TGGGGGSHHHHHHHHH
T ss_pred HHHHHhcccCCcEEEEecCCCCCcccccHHHHHHHHHHHh-c-cCCEEEEEccCCCCC------CcccccCHHHHHHHHH
Confidence 111222223569999999998 999999999986 4 999999999999854 3456778999999999
Q ss_pred Hhcccc---------cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccc-------------cCccCCCc---
Q 009196 305 ATSGTV---------DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTR-------------QQRYSKLA--- 359 (540)
Q Consensus 305 av~~~v---------~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr-------------~q~y~g~a--- 359 (540)
+|++.+ ++||+||++.+++ .+++.++++.++++|+|+|+||+++. .++++|++
T Consensus 196 ~vr~~~~~~~~~~g~~~Pv~vKi~~~~~--~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~ 273 (336)
T 1f76_A 196 AIKNKQNDLQAMHHKYVPIAVKIAPDLS--EEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQL 273 (336)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECCSCCC--HHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHH
T ss_pred HHHHHHHhhhhcccccCceEEEecCCCC--HHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHH
Confidence 999988 8999999998764 35788999999999999999998862 12345543
Q ss_pred -CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh-CCCchHHHHhc
Q 009196 360 -DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI-KPWIFTEIKEQ 421 (540)
Q Consensus 360 -dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~-nPwif~eik~~ 421 (540)
.+++++++++.++.++|||++|||.|++|+.+++. .|||+|||||+++. +||+|.+++++
T Consensus 274 ~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~--~GAd~V~igr~~l~~~P~~~~~i~~~ 335 (336)
T 1f76_A 274 KSTEIIRRLSLELNGRLPIIGVGGIDSVIAAREKIA--AGASLVQIYSGFIFKGPPLIKEIVTH 335 (336)
T ss_dssp HHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHH--CCCCEEEeeHHHHhcCcHHHHHHHhh
Confidence 35788999998855699999999999999999998 58999999999998 99999999864
No 24
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.97 E-value=9.5e-30 Score=264.99 Aligned_cols=231 Identities=13% Similarity=0.133 Sum_probs=183.7
Q ss_pred cccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhc---------------c--C--C--hhhh-hh
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLL---------------Q--G--Q--ASEW-AL 234 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~---------------~--g--~--~~e~-~l 234 (540)
+.+..+++|+|++++|.=..-.+..+...+...|++.+++..+...+-. + | + ...| ..
T Consensus 39 ~~~~~Gl~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~ 118 (345)
T 3oix_A 39 HTTIGSFDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDY 118 (345)
T ss_dssp CEEETTEEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHH
T ss_pred CeEECCEECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHH
Confidence 3578899999999999544445667777777889999888887765411 0 0 0 0011 11
Q ss_pred hhc---ccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCC-EEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc
Q 009196 235 LRR---HSSEDLFGVQICGAYPDTLARTVELIDQQCTVD-FIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV 310 (540)
Q Consensus 235 l~~---~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D-~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v 310 (540)
+.. ...+.|+++||+|.++++|+++|++++ ++|+| +||||+|||... | |.+|+.+|+.+.+|+++|++++
T Consensus 119 l~~~~~~~~~~pvivsI~g~~~~d~~~~a~~l~-~~g~~d~ielNisCPn~~----G-~~~l~~~~e~l~~il~av~~~~ 192 (345)
T 3oix_A 119 VTELQKQPDSKNHFLSLVGMSPEETHTILXMVE-ASKYQGLVELNLSCPNVP----G-XPQIAYDFETTDQILSEVFTYF 192 (345)
T ss_dssp HHHHHHSTTCCCCEEEECCSSHHHHHHHHHHHH-HSSCCSEEEEECSCCCST----T-CCCGGGCHHHHHHHHHHHTTTC
T ss_pred HHHHhhccCCCCEEEEecCCCHHHHHHHHHHHh-ccCCCcEEEEecCCCCcC----C-chhhcCCHHHHHHHHHHHHHHh
Confidence 111 345689999999999999999999997 67887 999999999964 3 6889999999999999999999
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEE-------------Eecccc-------cCccCCCcC----HHHHHH
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVT-------------VHGRTR-------QQRYSKLAD----WDYIYQ 366 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaIt-------------VHgRtr-------~q~y~g~ad----w~~I~~ 366 (540)
++||+||+|.++ +..++++.++.+|+++|+ ||.|+. .++|+|++. |++|++
T Consensus 193 ~~PV~vKi~p~~-----~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~ 267 (345)
T 3oix_A 193 TKPLGIKLPPYF-----DIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHA 267 (345)
T ss_dssp CSCEEEEECCCC-----CHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHH
T ss_pred CCCeEEEECCCC-----CHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHH
Confidence 999999999974 346777777777776553 555442 345777776 789999
Q ss_pred HHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH-HHhCCCchHHHHh
Q 009196 367 CARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG-ALIKPWIFTEIKE 420 (540)
Q Consensus 367 i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg-aL~nPwif~eik~ 420 (540)
+++.++.++|||++|||.|++|+.+++. .|||+|||||+ ++.+||+|.+|++
T Consensus 268 i~~~~~~~ipIIg~GGI~s~~da~~~l~--aGAd~V~igra~~~~gP~~~~~i~~ 320 (345)
T 3oix_A 268 FYKRLNPSIQIIGTGGVXTGRDAFEHIL--CGASMVQIGTALHQEGPQIFKRITK 320 (345)
T ss_dssp HHTTSCTTSEEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHHHCTHHHHHHHH
T ss_pred HHHHcCCCCcEEEECCCCChHHHHHHHH--hCCCEEEEChHHHhcChHHHHHHHH
Confidence 9998855699999999999999999997 68999999999 8999999999875
No 25
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.97 E-value=1.7e-29 Score=263.89 Aligned_cols=233 Identities=11% Similarity=0.059 Sum_probs=181.8
Q ss_pred ccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechh---------------cc--C--C--hhhh-hhh
Q 009196 178 REKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNL---------------LQ--G--Q--ASEW-ALL 235 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l---------------~~--g--~--~~e~-~ll 235 (540)
.+..+++|+|++++|-=....+..+-+.+...|++.+.+-.+...+- ++ | + ...| +.+
T Consensus 39 ~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l 118 (354)
T 4ef8_A 39 VNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYA 118 (354)
T ss_dssp EEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHH
T ss_pred eEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHH
Confidence 57889999999999975554455554445567887766655543321 00 0 0 0111 112
Q ss_pred hc--ccCCCeEEEEecCCcHHHHHHHHHHHHH--hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc
Q 009196 236 RR--HSSEDLFGVQICGAYPDTLARTVELIDQ--QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD 311 (540)
Q Consensus 236 ~~--~~~e~p~~vQL~G~~p~~~a~AA~~~~~--~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~ 311 (540)
.. ...+.|+++||+|.++++|+++|+++.+ ++|+|+||||+|||+.. | |.+|+.+|+.+.+|+++|+++++
T Consensus 119 ~~~~~~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~~e~~~~il~av~~~~~ 193 (354)
T 4ef8_A 119 AEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYDFDAMRQCLTAVSEVYP 193 (354)
T ss_dssp HHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGSHHHHHHHHHHHHHHCC
T ss_pred HHHhhcCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccCHHHHHHHHHHHHHhhC
Confidence 21 1235799999999999999999999873 45899999999999963 4 78899999999999999999999
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcC-CcEEEEec------------ccc-------cCccCCC----cCHHHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWG-ASAVTVHG------------RTR-------QQRYSKL----ADWDYIYQC 367 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaG-vdaItVHg------------Rtr-------~q~y~g~----adw~~I~~i 367 (540)
+||+||+|++++ ..++.+++..++++| +|+|++++ |+. .++|+|+ .+|++|+++
T Consensus 194 ~PV~vKi~p~~d--~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v 271 (354)
T 4ef8_A 194 HSFGVKMPPYFD--FAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAF 271 (354)
T ss_dssp SCEEEEECCCCS--HHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHH
T ss_pred CCeEEEecCCCC--HHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHH
Confidence 999999999984 456778888888998 99998743 321 2346664 469999999
Q ss_pred HHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC-CCchHHHHh
Q 009196 368 ARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK-PWIFTEIKE 420 (540)
Q Consensus 368 ~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n-Pwif~eik~ 420 (540)
++.++ ++|||+||||.|++|+.+++. .|||+|||||+++.+ ||+|.+|++
T Consensus 272 ~~~~~-~ipII~~GGI~s~~da~~~l~--aGAd~V~vgra~l~~GP~~~~~i~~ 322 (354)
T 4ef8_A 272 YRRCP-GKLIFGCGGVYTGEDAFLHVL--AGASMVQVGTALQEEGPSIFERLTS 322 (354)
T ss_dssp HHHCT-TSEEEEESCCCSHHHHHHHHH--HTEEEEEECHHHHHHCTTHHHHHHH
T ss_pred HHhCC-CCCEEEECCcCCHHHHHHHHH--cCCCEEEEhHHHHHhCHHHHHHHHH
Confidence 99864 699999999999999999997 799999999999999 999999875
No 26
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.96 E-value=6.2e-30 Score=260.07 Aligned_cols=231 Identities=17% Similarity=0.224 Sum_probs=183.2
Q ss_pred cccccCcccCCcEEEcc-CCCCCCHHHHHHHHHhCCCEEEeccc---------------------eechhccCChhhh-h
Q 009196 177 SREKKLIDFREKLYLAP-LTTVGNLPFRRVCKVLGADVTCGEMA---------------------MCTNLLQGQASEW-A 233 (540)
Q Consensus 177 p~e~~~l~lknrliLAP-M~~vtdlpfR~l~~~~Gadl~~TEmi---------------------~a~~l~~g~~~e~-~ 233 (540)
+.++.+++|+||+++|| |.+.+. +|++.+...|+++++|+-+ .+..+.+.....+ .
T Consensus 8 ~~~~~g~~l~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~~ 86 (311)
T 1ep3_A 8 SVKLPGLDLKNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMT 86 (311)
T ss_dssp CEEETTEEESSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHHH
T ss_pred ceEECCEECCCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHHH
Confidence 45788999999999999 988775 5666665566666665533 3333333332232 1
Q ss_pred -hh---hcccCCCeEEEEecCCcHHHHHHHHHHHHHh-CCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcc
Q 009196 234 -LL---RRHSSEDLFGVQICGAYPDTLARTVELIDQQ-CTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSG 308 (540)
Q Consensus 234 -ll---~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~-aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~ 308 (540)
.+ +....+.|+++||+|++++++.++++++. + +|+|+||||++||..+ +| |..++.+++++.++++++++
T Consensus 87 ~~~~~~~~~~~~~p~~v~l~~~~~~~~~~~a~~~~-~~~g~d~iei~~~~p~~~---~g-~~~~g~~~~~~~eii~~v~~ 161 (311)
T 1ep3_A 87 EKLPWLNENFPELPIIANVAGSEEADYVAVCAKIG-DAANVKAIELNISCPNVK---HG-GQAFGTDPEVAAALVKACKA 161 (311)
T ss_dssp THHHHHHHHCTTSCEEEEECCSSHHHHHHHHHHHT-TSTTEEEEEEECCSEEGG---GT-TEEGGGCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHHHHh-ccCCCCEEEEeCCCCCCC---Cc-hhhhcCCHHHHHHHHHHHHH
Confidence 12 21123789999999999999999999997 5 8999999999999853 22 66677899999999999999
Q ss_pred cccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE---------eccccc-------CccCCCcC----HHHHHHHH
Q 009196 309 TVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV---------HGRTRQ-------QRYSKLAD----WDYIYQCA 368 (540)
Q Consensus 309 ~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV---------HgRtr~-------q~y~g~ad----w~~I~~i~ 368 (540)
.+++||.||++.++. +..++++.++++|+|+|++ |.|++. +++++++. ++++++++
T Consensus 162 ~~~~pv~vk~~~~~~----~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~ 237 (311)
T 1ep3_A 162 VSKVPLYVKLSPNVT----DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVA 237 (311)
T ss_dssp HCSSCEEEEECSCSS----CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHH
T ss_pred hcCCCEEEEECCChH----HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHH
Confidence 889999999998774 3567899999999999999 555542 34667665 47888898
Q ss_pred HHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhc
Q 009196 369 RKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQ 421 (540)
Q Consensus 369 ~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~ 421 (540)
+.+ ++|||++|||.|++|+.++++ .|||+|||||+++.+|+++.+++++
T Consensus 238 ~~~--~ipvia~GGI~~~~d~~~~l~--~GAd~V~vg~~~l~~p~~~~~i~~~ 286 (311)
T 1ep3_A 238 QDV--DIPIIGMGGVANAQDVLEMYM--AGASAVAVGTANFADPFVCPKIIDK 286 (311)
T ss_dssp TTC--SSCEEECSSCCSHHHHHHHHH--HTCSEEEECTHHHHCTTHHHHHHHH
T ss_pred Hhc--CCCEEEECCcCCHHHHHHHHH--cCCCEEEECHHHHcCcHHHHHHHHH
Confidence 887 799999999999999999997 5899999999999999999998753
No 27
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.96 E-value=1.1e-28 Score=264.38 Aligned_cols=234 Identities=16% Similarity=0.144 Sum_probs=188.5
Q ss_pred CCcccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhcc----------C-----------Chh--h
Q 009196 175 THSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQ----------G-----------QAS--E 231 (540)
Q Consensus 175 ~~p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~----------g-----------~~~--e 231 (540)
+.+.++.+++|+||+++|++..-....|+.+ .++|++++++++++..+..- . +.. .
T Consensus 81 ~l~~~i~Gl~~~NPvglAAG~dk~~~~~~~l-~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~ 159 (443)
T 1tv5_A 81 YACTNIKHLDFINPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDK 159 (443)
T ss_dssp GGCEEETTEEESSSEEECTTTTTTCSSHHHH-HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHH
T ss_pred cCCeEECCEEeCCCcEECCcccCccHHHHHH-HhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHH
Confidence 3467899999999999999887555678886 45899999999988765210 0 000 0
Q ss_pred -hhhhhccc---------CCCeEEEEecCCc-----HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCc
Q 009196 232 -WALLRRHS---------SEDLFGVQICGAY-----PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKP 296 (540)
Q Consensus 232 -~~ll~~~~---------~e~p~~vQL~G~~-----p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p 296 (540)
...+..+. ...++++||++++ +++++++|+.+. . ++|+||||++||... |..+++++
T Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~-~-~aD~ieiNiscPnt~------Glr~lq~~ 231 (443)
T 1tv5_A 160 VTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIG-R-YADYIAINVSSPNTP------GLRDNQEA 231 (443)
T ss_dssp HHHHHHHHHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHG-G-GCSEEEEECCCTTST------TGGGGGSH
T ss_pred HHHHHHHHhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHh-c-CCCEEEEeccCCCCc------ccccccCH
Confidence 01111100 1468999999998 999999999997 3 799999999999964 77889999
Q ss_pred hHHHHHHHHhccc--------------------------------------------------cccc-EEEEecCCCCCC
Q 009196 297 MRMKGIIEATSGT--------------------------------------------------VDKP-ITIKVRTGYFEG 325 (540)
Q Consensus 297 ~~l~eIv~av~~~--------------------------------------------------v~iP-VtVKiR~G~~e~ 325 (540)
+.+.+|+++|+++ .++| |+||++.+++
T Consensus 232 ~~l~~il~~v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~-- 309 (443)
T 1tv5_A 232 GKLKNIILSVKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLN-- 309 (443)
T ss_dssp HHHHHHHHHHHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCC--
T ss_pred HHHHHHHHHHHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCC--
Confidence 9999999999754 3679 9999999874
Q ss_pred hhHHHHHHHHHHHcCCcEEEEeccccc-----------CccCCCcC----HHHHHHHHHHcCCCceEEEeCCCCCHHHHH
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQ-----------QRYSKLAD----WDYIYQCARKASDDLQVLGNGDIYSYLDWN 390 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~-----------q~y~g~ad----w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~ 390 (540)
.+++.++|+.++++|+|+|++|+++.. ++++|++. |++++++++.++.+||||++|||.|++|+.
T Consensus 310 ~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~ 389 (443)
T 1tv5_A 310 QEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDAL 389 (443)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHH
Confidence 357899999999999999999999763 34555543 688999999985579999999999999999
Q ss_pred HHHhcCCCcCeeeecHHHHh-CCCchHHHHhc
Q 009196 391 KHKSDCPELASCMIARGALI-KPWIFTEIKEQ 421 (540)
Q Consensus 391 ~~l~~~~gaDgVMIGRgaL~-nPwif~eik~~ 421 (540)
+++. .|||+|||||+++. +||++.+|+++
T Consensus 390 e~l~--aGAd~Vqigrall~~gP~l~~~i~~~ 419 (443)
T 1tv5_A 390 EKIE--AGASVCQLYSCLVFNGMKSAVQIKRE 419 (443)
T ss_dssp HHHH--TTEEEEEESHHHHHHGGGHHHHHHHH
T ss_pred HHHH--cCCCEEEEcHHHHhcChHHHHHHHHH
Confidence 9997 68999999999886 99999999763
No 28
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.96 E-value=1.7e-28 Score=256.72 Aligned_cols=247 Identities=9% Similarity=0.042 Sum_probs=197.8
Q ss_pred CCCCcccccCcccCCcEEEccCCCC--------CCHHHHHHHHHhCCCEEEeccceechhccCChh-----------hhh
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTV--------GNLPFRRVCKVLGADVTCGEMAMCTNLLQGQAS-----------EWA 233 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~v--------tdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~-----------e~~ 233 (540)
..|.|.++++++|+||+++|||++. ++...+++.++.++++++||.+.+.+-.++... .|+
T Consensus 3 ~LF~P~~ig~~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k 82 (358)
T 4a3u_A 3 SLFDPIRFGAFTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQEGLGWPYAPGIWSDAQVEAWL 82 (358)
T ss_dssp CTTSCEEETTEEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHH
T ss_pred CCCCCceECCEEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECccccCCCCCcccCchHhHHHHH
Confidence 4789999999999999999999863 346677777777889999999988875444322 233
Q ss_pred hh--hcccCCCeEEEEecCCc-----------------------------------------------HHHHHHHHHHHH
Q 009196 234 LL--RRHSSEDLFGVQICGAY-----------------------------------------------PDTLARTVELID 264 (540)
Q Consensus 234 ll--~~~~~e~p~~vQL~G~~-----------------------------------------------p~~~a~AA~~~~ 264 (540)
.+ ..|..+.++++||++.. .++|++||+++.
T Consensus 83 ~l~~avh~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~ 162 (358)
T 4a3u_A 83 PITQAVHDAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHAL 162 (358)
T ss_dssp HHHHHHHHTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHH
Confidence 22 46888999999997431 267999999998
Q ss_pred HhCCCCEEEecCC---------CCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC------C-CCChh
Q 009196 265 QQCTVDFIDINMG---------CPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG------Y-FEGKN 327 (540)
Q Consensus 265 ~~aG~D~IDIN~G---------CP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G------~-~e~~~ 327 (540)
++|||+||||++ +|..|.|+|.||+++.+|.+++.+||++|++++ +-+|.||+... . .++..
T Consensus 163 -~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~ 241 (358)
T 4a3u_A 163 -KAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQ 241 (358)
T ss_dssp -HTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHH
T ss_pred -HcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHH
Confidence 799999999987 699999999999999999999999999999998 34677776531 1 11234
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
....+++.+.+.|++.+.++.......+.......+...+++.+ .+||+. |++++++.++++|++ ..||.|++||+
T Consensus 242 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~--~~~v~~-~g~~~~~~ae~~l~~-G~aD~V~~gR~ 317 (358)
T 4a3u_A 242 VFIPAAKMLSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVF--KPPLVL-NQDYTFETAQAALDS-GVADAISFGRP 317 (358)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHC--CSCEEE-ESSCCHHHHHHHHHH-TSCSEEEESHH
T ss_pred HHHHHHHhhhccCccccccccccccCcccccccHHHHHHHHHhc--CCcEEE-eCCCCHHHHHHHHHc-CCceEeHhhHH
Confidence 56778899999999999998766554443333345677888877 567765 567799999999997 77999999999
Q ss_pred HHhCCCchHHHHhcCCC
Q 009196 408 ALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 408 aL~nPwif~eik~~~~~ 424 (540)
+|.||+|.+++++++++
T Consensus 318 ~ladPdlp~k~~~g~pl 334 (358)
T 4a3u_A 318 FIGNPDLPRRFFEKAPL 334 (358)
T ss_dssp HHHCTTHHHHHHHTCCC
T ss_pred HHhChhHHHHHHhCCCC
Confidence 99999999999999875
No 29
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.96 E-value=2.9e-28 Score=255.77 Aligned_cols=231 Identities=13% Similarity=0.102 Sum_probs=180.5
Q ss_pred cccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCCh------------------------hh-
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA------------------------SE- 231 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~------------------------~e- 231 (540)
+.+..+++|+|++++|-=..-....++.+.. +|++.+.+..+...+-. |++ ..
T Consensus 51 ~~~~~Gl~~~NPvglAaG~~~~~~~~~~~~~-~g~G~v~~ktvt~~pq~-GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~ 128 (367)
T 3zwt_A 51 EVRVLGHKFRNPVGIAAGFDKHGEAVDGLYK-MGFGFVEIGSVTPKPQE-GNPRPRVFRLPEDQAVINRYGFNSHGLSVV 128 (367)
T ss_dssp CEEETTEEESSSEEECTTSSTTSSSHHHHHH-TTCSEEEEEEECSSCBC-CSCSCCEEEEGGGTEEEECCCCCBCCHHHH
T ss_pred cEEECCEEcCCCCEeCCCcCCCHHHHHHHHh-cCcCeEEeCCccCCCCC-CCCCCeEEEecCccceeeccCCCCccHHHH
Confidence 3578899999999999533322345666664 69888877766544311 110 01
Q ss_pred hhhhhc-c-------cCCCeEEEEecCC-----cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchH
Q 009196 232 WALLRR-H-------SSEDLFGVQICGA-----YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMR 298 (540)
Q Consensus 232 ~~ll~~-~-------~~e~p~~vQL~G~-----~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~ 298 (540)
++.+.. . ..+.|+++||+|+ .+++++++++.+.+ ++|+||||+|||+.. |..++++++.
T Consensus 129 ~~~l~~~~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~--~ad~ielNisCPn~~------G~~~l~~~~~ 200 (367)
T 3zwt_A 129 EHRLRARQQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGP--LADYLVVNVSSPNTA------GLRSLQGKAE 200 (367)
T ss_dssp HHHHHTTHHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGG--GCSEEEEECCCTTST------TGGGGGSHHH
T ss_pred HHHHHHHhhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhh--hCCEEEEECCCCCCC------CccccCCHHH
Confidence 111111 0 1357999999996 78999999999873 579999999999874 3457899999
Q ss_pred HHHHHHHhccc-------ccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEeccccc-------------CccCCC
Q 009196 299 MKGIIEATSGT-------VDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQ-------------QRYSKL 358 (540)
Q Consensus 299 l~eIv~av~~~-------v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~-------------q~y~g~ 358 (540)
+.+++++|+++ +++||+||+|.+++ .+++.++|+.++++|+|+|++|+++.. ++++|+
T Consensus 201 l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~--~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~ 278 (367)
T 3zwt_A 201 LRRLLTKVLQERDGLRRVHRPAVLVKIAPDLT--SQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGK 278 (367)
T ss_dssp HHHHHHHHHHHHHTSCGGGCCEEEEEECSCCC--HHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEG
T ss_pred HHHHHHHHHHHHhhccccCCceEEEEeCCCCC--HHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCc
Confidence 99999999764 68999999999874 367889999999999999999998732 356666
Q ss_pred cC----HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH-hCCCchHHHHhc
Q 009196 359 AD----WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL-IKPWIFTEIKEQ 421 (540)
Q Consensus 359 ad----w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL-~nPwif~eik~~ 421 (540)
+. |++|+++++.++.++|||++|||.|++|+.+++. .|||+|||||+++ .+||+|.+|+++
T Consensus 279 ~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~--~GAd~V~vgra~l~~gP~~~~~i~~~ 344 (367)
T 3zwt_A 279 PLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIR--AGASLVQLYTALTFWGPPVVGKVKRE 344 (367)
T ss_dssp GGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHHHCTHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHH--cCCCEEEECHHHHhcCcHHHHHHHHH
Confidence 64 5889999999865799999999999999999997 6999999999995 579999999753
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=1.4e-27 Score=279.15 Aligned_cols=234 Identities=16% Similarity=0.134 Sum_probs=190.4
Q ss_pred ccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhc---------c--------C-------------
Q 009196 178 REKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLL---------Q--------G------------- 227 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~---------~--------g------------- 227 (540)
.+..++.|+|++++|||+..++.++++.+...|.+++++++++..+-. + +
T Consensus 535 ~~~~G~~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~ 614 (1025)
T 1gte_A 535 VEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELIS 614 (1025)
T ss_dssp EEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSC
T ss_pred eeeccccccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeecccc
Confidence 456688999999999999999999999998899999988776653211 1 0
Q ss_pred --Chhh----hhhhhcccCCCeEEEEe-cCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHH
Q 009196 228 --QASE----WALLRRHSSEDLFGVQI-CGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMK 300 (540)
Q Consensus 228 --~~~e----~~ll~~~~~e~p~~vQL-~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~ 300 (540)
.... ...++....+.|+++|| +|.+++.|.++|+++. ++|+|+|+||+|||.. ...+++|++|+++++++.
T Consensus 615 ~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~-~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~ 692 (1025)
T 1gte_A 615 EKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAE-ASGADALELNLSCPHG-MGERGMGLACGQDPELVR 692 (1025)
T ss_dssp SSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHH-HTTCSEEEEECCCBCC-CC-----SBGGGCHHHHH
T ss_pred chhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHH-hcCCCEEEEECCCCCC-CCCCCcccccccCHHHHH
Confidence 0000 11122222356888877 6889999999999997 6899999999999998 667899999999999999
Q ss_pred HHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE----------------------ecccccCccCCC
Q 009196 301 GIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV----------------------HGRTRQQRYSKL 358 (540)
Q Consensus 301 eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV----------------------HgRtr~q~y~g~ 358 (540)
++++++++++++||+||++.+.. ++.++++.++++|+|+|++ |+|+..++|+++
T Consensus 693 ~iv~~v~~~~~~Pv~vK~~~~~~----~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~ 768 (1025)
T 1gte_A 693 NICRWVRQAVQIPFFAKLTPNVT----DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGT 768 (1025)
T ss_dssp HHHHHHHHHCSSCEEEEECSCSS----CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESG
T ss_pred HHHHHHHHhhCCceEEEeCCChH----HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcc
Confidence 99999999999999999998653 4788999999999999999 777777888888
Q ss_pred cCH----HHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh-CCCchHHHHh
Q 009196 359 ADW----DYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI-KPWIFTEIKE 420 (540)
Q Consensus 359 adw----~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~-nPwif~eik~ 420 (540)
+.| +++.++++.++ ++|||++|||.|++|+.+++. .|||+|||||+++. .|.++.++.+
T Consensus 769 ~~~~~~~~~v~~v~~~~~-~ipvi~~GGI~s~~da~~~l~--~Ga~~v~vg~~~l~~~~~~~~~~~~ 832 (1025)
T 1gte_A 769 AIRPIALRAVTTIARALP-GFPILATGGIDSAESGLQFLH--SGASVLQVCSAVQNQDFTVIQDYCT 832 (1025)
T ss_dssp GGHHHHHHHHHHHHHHST-TCCEEEESSCCSHHHHHHHHH--TTCSEEEESHHHHTSCTTHHHHHHH
T ss_pred cchhHHHHHHHHHHHHcC-CCCEEEecCcCCHHHHHHHHH--cCCCEEEEeeccccCCccHHHHHHH
Confidence 886 78999999885 699999999999999999997 79999999999998 5557777654
No 31
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.95 E-value=2.4e-27 Score=251.51 Aligned_cols=232 Identities=17% Similarity=0.191 Sum_probs=175.7
Q ss_pred CcccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCCh------------------------hh
Q 009196 176 HSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA------------------------SE 231 (540)
Q Consensus 176 ~p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~------------------------~e 231 (540)
.+.+..+++|+|++++|-=..-....++.+. .+|++.+.+..+...+- .|++ ..
T Consensus 84 l~v~~~Gl~f~NPvglAAG~dk~~~~~~~l~-~lGfG~vevgtvT~~pq-~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~ 161 (415)
T 3i65_A 84 ACTNIKHLDFINPFGVAAGFDKNGVCIDSIL-KLGFSFIEIGTITPRGQ-TGNAKPRIFRDVESRSIINSCGFNNMGCDK 161 (415)
T ss_dssp GCEEETTEEESSSEEECTTSSTTCSSHHHHH-TTTCSEEEEEEECSSCB-CCSCSCCEEEEGGGTEEEECCCSCBCCHHH
T ss_pred ccEEECCEECCCCCEECCCCCCCHHHHHHHH-HcCCCeEEeCcccCCcC-CCCCCCeEEeccCCCceeecCCCCchhHHH
Confidence 4668889999999999974332223445554 47888776665544331 0110 00
Q ss_pred h-hhhh----ccc-----CCCeEEEEecCCc-----HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCc
Q 009196 232 W-ALLR----RHS-----SEDLFGVQICGAY-----PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKP 296 (540)
Q Consensus 232 ~-~ll~----~~~-----~e~p~~vQL~G~~-----p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p 296 (540)
+ +.+. ..+ ...++++||++++ +++|.++++.+. .+ +|.||||++||+.. |..+++++
T Consensus 162 ~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~-~~-ad~ieiNiScPNt~------Gl~~lq~~ 233 (415)
T 3i65_A 162 VTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIG-RY-ADYIAINVSSPNTP------GLRDNQEA 233 (415)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHG-GG-CSEEEEECCCCC--------------CC
T ss_pred HHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHH-hh-CCEEEEECCCCCCC------CcccccCH
Confidence 0 1111 111 2457999999998 899999999997 33 89999999999964 67899999
Q ss_pred hHHHHHHHHhcccc--------------------ccc-EEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccc----
Q 009196 297 MRMKGIIEATSGTV--------------------DKP-ITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTR---- 351 (540)
Q Consensus 297 ~~l~eIv~av~~~v--------------------~iP-VtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr---- 351 (540)
+.+.+|+++|+++. .+| |+|||+.+++ .+++.++|+.++++|+|+|++|+++.
T Consensus 234 ~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~--~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~d 311 (415)
T 3i65_A 234 GKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLN--QEQKKEIADVLLETNIDGMIISNTTTQIND 311 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCC--HHHHHHHHHHHHHHTCSEEEECCCBSCCCC
T ss_pred HHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecCCCC--HHHHHHHHHHHHHcCCcEEEEeCCCccccc
Confidence 99999999998762 689 9999999874 35789999999999999999999885
Q ss_pred -------cCccCCCcCH----HHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC-CCchHHHH
Q 009196 352 -------QQRYSKLADW----DYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK-PWIFTEIK 419 (540)
Q Consensus 352 -------~q~y~g~adw----~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n-Pwif~eik 419 (540)
.++++|++.| ++|+++++.++.+||||++|||.|++|+.+++. .|||+|||||+++.+ ||+|.+|+
T Consensus 312 l~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l~--aGAd~VqIgra~l~~GP~~~~~i~ 389 (415)
T 3i65_A 312 IKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIE--AGASVCQLYSCLVFNGMKSAVQIK 389 (415)
T ss_dssp CGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHHH--HTEEEEEESHHHHHHGGGHHHHHH
T ss_pred ccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHH--cCCCEEEEcHHHHhcCHHHHHHHH
Confidence 2457787776 789999998865699999999999999999997 699999999999988 99999987
Q ss_pred hc
Q 009196 420 EQ 421 (540)
Q Consensus 420 ~~ 421 (540)
++
T Consensus 390 ~~ 391 (415)
T 3i65_A 390 RE 391 (415)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 32
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.94 E-value=3.1e-26 Score=240.54 Aligned_cols=252 Identities=14% Similarity=0.095 Sum_probs=199.6
Q ss_pred ccccCcccCCcEEEccCC--CCC----CHHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecC-
Q 009196 178 REKKLIDFREKLYLAPLT--TVG----NLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICG- 250 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~--~vt----dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G- 250 (540)
.++.+..++.|+++|||+ +++ +.++++.|+++|+.+++|+|.+ .++ .+ +.....+.|+++||++
T Consensus 72 t~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s-~~l-----e~---v~~~~~~~~~~~QLy~~ 142 (368)
T 2nli_A 72 TEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG-ATF-----EE---ISEGLNGGPRWFQIYMA 142 (368)
T ss_dssp EEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS-SCH-----HH---HHHHHTTCCEEEEECCB
T ss_pred eEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh-HHH-----HH---HHHhCCCCCEEEEEecc
Confidence 355678899999999998 766 4899999999999999999986 222 11 2222346789999998
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCc------------------ccc----cCCccccc---c--CCchHHHHHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPID------------------IVV----NKGAGSCL---L--TKPMRMKGII 303 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~------------------~v~----~~G~GsaL---l--~~p~~l~eIv 303 (540)
.+++...+++++++ .+|+++|+||++||.. ++. ..+.|+.| + .++.+..++|
T Consensus 143 ~d~~~~~~~~~ra~-~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i 221 (368)
T 2nli_A 143 KDDQQNRDILDEAK-SDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDI 221 (368)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHH
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHH
Confidence 78888999999996 7899999999999972 111 03456665 3 3778888899
Q ss_pred HHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCC
Q 009196 304 EATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDI 383 (540)
Q Consensus 304 ~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI 383 (540)
+++++.+++||+||.-. ..+.++.+.++|+|+|+|+++...|.+.+++.|+.+.++++.++.++|||++|||
T Consensus 222 ~~lr~~~~~PvivK~v~--------~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI 293 (368)
T 2nli_A 222 EEIAGHSGLPVFVKGIQ--------HPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGV 293 (368)
T ss_dssp HHHHHHSSSCEEEEEEC--------SHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSC
T ss_pred HHHHHHcCCCEEEEcCC--------CHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCC
Confidence 99999999999999532 2466899999999999997766667788899999999999988656999999999
Q ss_pred CCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHH
Q 009196 384 YSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETTRHF 459 (540)
Q Consensus 384 ~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~R~~ 459 (540)
.+.+|+.++|. .|||+|||||++ ++.....+.. ...+.+++++++++..+...|. ..+..+|+.
T Consensus 294 ~~g~D~~kala--lGAd~V~iGr~~-----l~~~~~~G~~---gv~~~l~~l~~el~~~m~~~G~--~~i~~l~~~ 357 (368)
T 2nli_A 294 RRGEHVAKALA--SGADVVALGRPV-----LFGLALGGWQ---GAYSVLDYFQKDLTRVMQLTGS--QNVEDLKGL 357 (368)
T ss_dssp CSHHHHHHHHH--TTCSEEEECHHH-----HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTC--SSHHHHHTC
T ss_pred CCHHHHHHHHH--cCCCEEEECHHH-----HHHHHhcChH---HHHHHHHHHHHHHHHHHHHhCC--cCHHHhccc
Confidence 99999999998 799999999955 4554433321 3457889999999999999996 477777664
No 33
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.94 E-value=3.8e-26 Score=242.27 Aligned_cols=248 Identities=9% Similarity=0.035 Sum_probs=184.0
Q ss_pred CCCCcccccCcccCCcEEEccCCCCC----------CHHHHHHHHH--hCCCEEEeccceechhccCChh----------
Q 009196 173 LKTHSREKKLIDFREKLYLAPLTTVG----------NLPFRRVCKV--LGADVTCGEMAMCTNLLQGQAS---------- 230 (540)
Q Consensus 173 ~~~~p~e~~~l~lknrliLAPM~~vt----------dlpfR~l~~~--~Gadl~~TEmi~a~~l~~g~~~---------- 230 (540)
..|.|.++++++|+||++||||++.. +...+++.++ .|+++++||.+.+.+-.++...
T Consensus 16 ~LF~P~~ig~l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i 95 (400)
T 4gbu_A 16 NLFKPIKIGNNELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQM 95 (400)
T ss_dssp GGGSCEEETTEEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHH
T ss_pred CCCCCeeECCEEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHH
Confidence 47999999999999999999998632 3455666655 4799999999998876554322
Q ss_pred -hhhhh--hcccCCCeEEEEecCCc--------------------------------------------------HHHHH
Q 009196 231 -EWALL--RRHSSEDLFGVQICGAY--------------------------------------------------PDTLA 257 (540)
Q Consensus 231 -e~~ll--~~~~~e~p~~vQL~G~~--------------------------------------------------p~~~a 257 (540)
.|+.+ ..|..+.++++||++.. .++|+
T Consensus 96 ~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~ 175 (400)
T 4gbu_A 96 VEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYV 175 (400)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHH
Confidence 23322 46888999999997531 15799
Q ss_pred HHHHHHHHhCCCCEEEecCC---------CCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC-CCC--
Q 009196 258 RTVELIDQQCTVDFIDINMG---------CPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG-YFE-- 324 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~G---------CP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G-~~e-- 324 (540)
+||+++. ++|||+||||++ +|..|.|+|.||+++.+|.+++.|||++|++++ +.||.||+... +.+
T Consensus 176 ~AA~rA~-~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~ 254 (400)
T 4gbu_A 176 QAAKNSI-AAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSM 254 (400)
T ss_dssp HHHHHHH-HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTC
T ss_pred HHHHHHH-hcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCC
Confidence 9999998 899999999987 699999999999999999999999999999998 45888877531 111
Q ss_pred -----C--hhHHHHHHHHHHHcC-----CcEEEEecccccCc--cCCCc--CHHHHHHHHHHcCCCceEEEeCCCCCHHH
Q 009196 325 -----G--KNRIDSLIADIGTWG-----ASAVTVHGRTRQQR--YSKLA--DWDYIYQCARKASDDLQVLGNGDIYSYLD 388 (540)
Q Consensus 325 -----~--~~~~~~la~~leeaG-----vdaItVHgRtr~q~--y~g~a--dw~~I~~i~~~~~~~IPVIgNGdI~s~eD 388 (540)
. ......++..|+..+ ++.+.+........ ..+.. ...+...+++.+ ++|||++|+|.+..+
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~~pvi~~G~~~~~~~ 332 (400)
T 4gbu_A 255 SGGAETGIVAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIW--KGPVIRAGNFALHPE 332 (400)
T ss_dssp CGGGSTTHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHC--CSCEEEESSCTTCHH
T ss_pred CccchhhhHHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHh--CCCEEEeCCCCChHH
Confidence 1 124555666665432 44555443211111 11111 111234467777 799999999998877
Q ss_pred HHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCC
Q 009196 389 WNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHW 424 (540)
Q Consensus 389 a~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~ 424 (540)
+.+.+.+ .+||.|.+||++|.||.|.+++++++++
T Consensus 333 ~~~~~~~-~~aDlV~~gR~~iadPdl~~k~~~G~pl 367 (400)
T 4gbu_A 333 VVREEVK-DKRTLIGYGRFFISNPDLVDRLEKGLPL 367 (400)
T ss_dssp HHHHHTT-STTEEEECCHHHHHCTTHHHHHHHTCCC
T ss_pred HHHHHHc-CCCeEhHHHHHHHHCcHHHHHHHcCCCC
Confidence 7776765 7899999999999999999999999875
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.93 E-value=1e-24 Score=226.65 Aligned_cols=250 Identities=14% Similarity=0.167 Sum_probs=184.5
Q ss_pred ccccCcccCCcEEEccCCCCC-------CHHHHHHHHHhCCCEEEeccceechhccCC-hhhhhhhhcccCCCeEEEEec
Q 009196 178 REKKLIDFREKLYLAPLTTVG-------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQ-ASEWALLRRHSSEDLFGVQIC 249 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~vt-------dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~-~~e~~ll~~~~~e~p~~vQL~ 249 (540)
.++.+..|++++++|||++++ +.++++.|.++|+.+++++|.+. +-+.. ...+.+++....+.|+++||.
T Consensus 47 ~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~pv~~~i~ 124 (349)
T 1p0k_A 47 TKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA--LKDPSERLSYEIVRKENPNGLIFANLG 124 (349)
T ss_dssp EEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT--TTCHHHHHHHHHHHHHCSSSCEEEEEE
T ss_pred eEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc--ccCcccccceehhhhhCCCceeEEeec
Confidence 456788999999999999999 88999999999999999998764 11111 122344444456789999999
Q ss_pred -CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchH--HHHHHHHhcccccccEEEEec-CCCCCC
Q 009196 250 -GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMR--MKGIIEATSGTVDKPITIKVR-TGYFEG 325 (540)
Q Consensus 250 -G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~--l~eIv~av~~~v~iPVtVKiR-~G~~e~ 325 (540)
|.+++.+.++ +. .+|+|+|+||++||...... .| ++.+ +.++|+++++.+++||.+|+. .+++
T Consensus 125 ~~~~~~~~~~~---~~-~~gad~i~i~~~~~~~~~~~--~~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~~-- 191 (349)
T 1p0k_A 125 SEATAAQAKEA---VE-MIGANALQIHLNVIQEIVMP--EG-----DRSFSGALKRIEQICSRVSVPVIVKEVGFGMS-- 191 (349)
T ss_dssp TTCCHHHHHHH---HH-HTTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEEESSCCC--
T ss_pred CCCCHHHHHHH---HH-hcCCCeEEecccchhhhcCC--CC-----CcchHHHHHHHHHHHHHcCCCEEEEecCCCCC--
Confidence 7888877654 33 56899999999999754332 12 3433 778999999888999999984 4442
Q ss_pred hhHHHHHHHHHHHcCCcEEEE--eccc--------ccC------ccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHH
Q 009196 326 KNRIDSLIADIGTWGASAVTV--HGRT--------RQQ------RYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDW 389 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItV--HgRt--------r~q------~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa 389 (540)
.+.++.+.++|+|+|+| ||+| +.+ .+.+++.|+.+.++++.++ ++|||++|||.+++|+
T Consensus 192 ----~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~ 266 (349)
T 1p0k_A 192 ----KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFP-ASTMIASGGLQDALDV 266 (349)
T ss_dssp ----HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCT-TSEEEEESSCCSHHHH
T ss_pred ----HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcC-CCeEEEECCCCCHHHH
Confidence 46688999999999999 7775 322 3567788999999998874 7999999999999999
Q ss_pred HHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHH
Q 009196 390 NKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETTRHF 459 (540)
Q Consensus 390 ~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~R~~ 459 (540)
.+++. .|||+|||||+++..+. ..+. ....+.++.+.++++..+...|. ..+..+|+.
T Consensus 267 ~k~l~--~GAd~V~iG~~~l~~~~-----~~g~---~~~~~~~~~~~~~l~~~m~~~G~--~~i~el~~~ 324 (349)
T 1p0k_A 267 AKAIA--LGASCTGMAGHFLKALT-----DSGE---EGLLEEIQLILEELKLIMTVLGA--RTIADLQKA 324 (349)
T ss_dssp HHHHH--TTCSEEEECHHHHHHHH-----HHHH---HHHHHHHHHHHHHHHHHHHHHTC--CBHHHHTTC
T ss_pred HHHHH--cCCCEEEEcHHHHHHHh-----hcCH---HHHHHHHHHHHHHHHHHHHHhCC--CCHHHHhhC
Confidence 99997 69999999998776532 1111 12346778888888888888885 467777664
No 35
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.92 E-value=1.8e-24 Score=228.84 Aligned_cols=249 Identities=14% Similarity=0.119 Sum_probs=190.1
Q ss_pred cccCcccCCcEEEccCCCCCCHH-------HHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecC-
Q 009196 179 EKKLIDFREKLYLAPLTTVGNLP-------FRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICG- 250 (540)
Q Consensus 179 e~~~l~lknrliLAPM~~vtdlp-------fR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G- 250 (540)
++.+..++.|+++||| ++++++ +++.|.++|+.+++|+|.+. .+ .+ +.....+.|+++||++
T Consensus 87 ~i~G~~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~-~l-----e~---v~~~~~~~~~~~QLy~~ 156 (392)
T 2nzl_A 87 SVLGQRVSMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWATS-SI-----EE---VAEAGPEALRWLQLYIY 156 (392)
T ss_dssp EETTEEESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSS-CH-----HH---HHHHCTTSEEEEEECCB
T ss_pred EECCEecCCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHHH-HH-----HH---HHHhcCCCcEEEEEEec
Confidence 5567889999999999 777665 99999999999999998852 22 11 2223346899999988
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCc---------------cc-----c------cC----Cccc---cccC---
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPID---------------IV-----V------NK----GAGS---CLLT--- 294 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~---------------~v-----~------~~----G~Gs---aLl~--- 294 (540)
.+++...+.+++++ .+|+++|+||++||.. .+ . .. +.|+ +++.
T Consensus 157 ~d~~~~~~~~~ra~-~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~~~~~~~~~~ 235 (392)
T 2nzl_A 157 KDREVTKKLVRQAE-KMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAI 235 (392)
T ss_dssp SSHHHHHHHHHHHH-HTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------CHHHHHHHHB
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcchHHHHHhhcC
Confidence 78888999999986 7899999999999984 22 0 00 2233 3444
Q ss_pred CchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 295 KPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 295 ~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
++++..++|+++++.+++||+||.-. + .+.|+.+.++|+|+|+|+++...|.+.+++.|+.+.++++.++.+
T Consensus 236 d~~~~~~~i~~lr~~~~~PvivKgv~----~----~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ 307 (392)
T 2nzl_A 236 DPSISWEDIKWLRRLTSLPIVAKGIL----R----GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGK 307 (392)
T ss_dssp CTTCCHHHHHHHC--CCSCEEEEEEC----C----HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTS
T ss_pred ChHHHHHHHHHHHHhhCCCEEEEecC----C----HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCC
Confidence 78778888999999999999999532 1 456899999999999998877777888899999999999988656
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHH
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVE 454 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~ 454 (540)
+|||++|||.+.+|+.++|. .|||+|||||++| +.....+. ....+.+++++++++..+...|. ..+.
T Consensus 308 ipVia~GGI~~g~Dv~kala--lGAd~V~iGr~~l-----~~~~~~g~---~gv~~~l~~l~~el~~~m~~~G~--~~i~ 375 (392)
T 2nzl_A 308 VEVFLDGGVRKGTDVLKALA--LGAKAVFVGRPIV-----WGLAFQGE---KGVQDVLEILKEEFRLAMALSGC--QNVK 375 (392)
T ss_dssp SEEEECSSCCSHHHHHHHHH--TTCSEEEECHHHH-----HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTC--SBGG
T ss_pred CEEEEECCCCCHHHHHHHHH--hCCCeeEECHHHH-----HHHHhcCh---HHHHHHHHHHHHHHHHHHHHhCC--CcHH
Confidence 99999999999999999998 7999999999665 43332221 12346778888888888888875 2454
Q ss_pred HHHH
Q 009196 455 TTRH 458 (540)
Q Consensus 455 ~~R~ 458 (540)
.+|+
T Consensus 376 el~~ 379 (392)
T 2nzl_A 376 VIDK 379 (392)
T ss_dssp GCCG
T ss_pred HHhh
Confidence 4443
No 36
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.91 E-value=3.7e-23 Score=217.16 Aligned_cols=251 Identities=14% Similarity=0.071 Sum_probs=190.3
Q ss_pred ccccCcccCCcEEEccCCCCCCHH-------HHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec-
Q 009196 178 REKKLIDFREKLYLAPLTTVGNLP-------FRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC- 249 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~vtdlp-------fR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~- 249 (540)
.++.+..++.|+++||| ++++++ +++.|+++|+.+++|+|.+.. .+.+.... ..+..+||+
T Consensus 63 t~i~G~~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~---------ieev~~~~-~~~~~~QLy~ 131 (370)
T 1gox_A 63 TTILGFKISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS---------VEEVASTG-PGIRFFQLYV 131 (370)
T ss_dssp EEETTEEESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC---------HHHHHTTC-CCCEEEEECC
T ss_pred eEECCcccCCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC---------HHHHHhhc-CCCceEEEec
Confidence 35567789999999999 888877 999999999999999988542 11222222 278999997
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc---------------c-----ccc-------CCccccc------cCCc
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPID---------------I-----VVN-------KGAGSCL------LTKP 296 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~---------------~-----v~~-------~G~GsaL------l~~p 296 (540)
+.+++...+.++++. .+|++.|+||++||.. . +.. .+.|+.+ +.++
T Consensus 132 ~~d~~~~~~~~~~a~-~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~ 210 (370)
T 1gox_A 132 YKDRNVVAQLVRRAE-RAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDR 210 (370)
T ss_dssp BSSHHHHHHHHHHHH-HTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCT
T ss_pred CCCchHHHHHHHHHH-HCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCc
Confidence 889998889999886 7899999999999965 1 111 2345554 4566
Q ss_pred hHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCce
Q 009196 297 MRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQ 376 (540)
Q Consensus 297 ~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IP 376 (540)
.+..++|+.+++.+++||.+|.+.. .+.++.+.++|+|+|+|.+....+.+.+++.|+.+.++++.++.++|
T Consensus 211 ~~~~~~i~~l~~~~~~pv~vK~~~~--------~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ip 282 (370)
T 1gox_A 211 SLSWKDVAWLQTITSLPILVKGVIT--------AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIP 282 (370)
T ss_dssp TCCHHHHHHHHHHCCSCEEEECCCS--------HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSC
T ss_pred cchHHHHHHHHHHhCCCEEEEecCC--------HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCE
Confidence 7666789999998999999999853 35678899999999999543334567778899999999998865799
Q ss_pred EEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHH
Q 009196 377 VLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETT 456 (540)
Q Consensus 377 VIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~ 456 (540)
||++|||.+.+|+.+++. .|||+|||||+++.. ....+. ....+.++.+.++++..+...|. ..+..+
T Consensus 283 via~GGI~~~~D~~k~l~--~GAdaV~iGr~~l~~-----~~~~G~---~gv~~~~~~l~~el~~~m~~~G~--~~i~el 350 (370)
T 1gox_A 283 VFLDGGVRRGTDVFKALA--LGAAGVFIGRPVVFS-----LAAEGE---AGVKKVLQMMRDEFELTMALSGC--RSLKEI 350 (370)
T ss_dssp EEEESSCCSHHHHHHHHH--HTCSEEEECHHHHHH-----HHHHHH---HHHHHHHHHHHHHHHHHHHHHTC--SBTTTC
T ss_pred EEEECCCCCHHHHHHHHH--cCCCEEeecHHHHHH-----HhhccH---HHHHHHHHHHHHHHHHHHHHhCC--CCHHHh
Confidence 999999999999999997 699999999987643 222221 12346778888888888888885 356666
Q ss_pred HHHH
Q 009196 457 RHFL 460 (540)
Q Consensus 457 R~~l 460 (540)
|+++
T Consensus 351 ~~~~ 354 (370)
T 1gox_A 351 SRSH 354 (370)
T ss_dssp CGGG
T ss_pred hhcc
Confidence 5543
No 37
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.90 E-value=1.1e-23 Score=229.81 Aligned_cols=255 Identities=16% Similarity=0.140 Sum_probs=195.0
Q ss_pred ccccCcccCCcEEEccCCC---C----CCHHHHHHHHH--hCCCEEEeccceechhccCChhhhhhhhcc-cCCCeEEEE
Q 009196 178 REKKLIDFREKLYLAPLTT---V----GNLPFRRVCKV--LGADVTCGEMAMCTNLLQGQASEWALLRRH-SSEDLFGVQ 247 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~---v----tdlpfR~l~~~--~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~-~~e~p~~vQ 247 (540)
.++.+..++.++++|||+. + ++.++++.|++ +|+.+++|||.+..- .+ +.... ..+.+..+|
T Consensus 181 t~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~------e~--v~~~~~~~~~~~~~Q 252 (511)
T 1kbi_A 181 TDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSP------EE--IIEAAPSDKQIQWYQ 252 (511)
T ss_dssp EEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCH------HH--HHHTCCCSSCCEEEE
T ss_pred cccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCH------HH--HHhhcCCCCCCeEEE
Confidence 4566778999999999997 3 57999999999 999999999954321 11 11112 235789999
Q ss_pred ec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc----------------cccc------C-Ccc-cccc---CCchHH
Q 009196 248 IC-GAYPDTLARTVELIDQQCTVDFIDINMGCPID----------------IVVN------K-GAG-SCLL---TKPMRM 299 (540)
Q Consensus 248 L~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~----------------~v~~------~-G~G-saLl---~~p~~l 299 (540)
|+ +.+++.+.+++++++ .+|+++|.|++.||+. .+.. + +.| +.++ .+|.+.
T Consensus 253 Ly~~~d~~~~~~~~~rae-~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~~d~~~~ 331 (511)
T 1kbi_A 253 LYVNSDRKITDDLVKNVE-KLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKFIDPSLT 331 (511)
T ss_dssp ECCCSSHHHHHHHHHHHH-HHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTTBCTTCC
T ss_pred EeecCCHHHHHHHHHHHH-HcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhccChHhH
Confidence 98 889999999999997 6899999999999971 1110 1 122 2234 577877
Q ss_pred HHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcC-----CC
Q 009196 300 KGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKAS-----DD 374 (540)
Q Consensus 300 ~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~-----~~ 374 (540)
.++|+++++.+++||+||.-. . .+.|+.+.++|+|+|+|+++...|.+.+++.|+++.++++.+. .+
T Consensus 332 ~~~i~~lr~~~~~PvivKgv~----~----~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ 403 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGVQ----R----TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDK 403 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEEC----S----HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTT
T ss_pred HHHHHHHHHHhCCcEEEEeCC----C----HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCC
Confidence 888999999999999999432 1 4568899999999999966554466777888999999998872 36
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHH
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVE 454 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~ 454 (540)
||||++|||.+.+|+.++|. .|||+|||||++| |.....+. ....+.+++++++++..+...|. ..+.
T Consensus 404 ipVia~GGI~~g~Dv~kaLa--lGAdaV~iGr~~l-----~~~~~~G~---~gv~~~l~~l~~el~~~m~~~G~--~~i~ 471 (511)
T 1kbi_A 404 LEVFVDGGVRRGTDVLKALC--LGAKGVGLGRPFL-----YANSCYGR---NGVEKAIEILRDEIEMSMRLLGV--TSIA 471 (511)
T ss_dssp BEEEEESSCCSHHHHHHHHH--HTCSEEEECHHHH-----HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHTC--CBGG
T ss_pred cEEEEECCCCCHHHHHHHHH--cCCCEEEECHHHH-----HHHHhcCh---HHHHHHHHHHHHHHHHHHHHhCC--CcHH
Confidence 99999999999999999998 6999999999665 44433222 12456788999999999999986 4677
Q ss_pred HHHHHHH
Q 009196 455 TTRHFLL 461 (540)
Q Consensus 455 ~~R~~l~ 461 (540)
.+|+.++
T Consensus 472 el~~~~l 478 (511)
T 1kbi_A 472 ELKPDLL 478 (511)
T ss_dssp GCCGGGE
T ss_pred HHhHHHh
Confidence 7777654
No 38
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.87 E-value=1.4e-21 Score=202.07 Aligned_cols=239 Identities=17% Similarity=0.151 Sum_probs=169.5
Q ss_pred ccccCcccCCcEEEccCCCCCC------HHHHHHHHHhCCCEEEeccceechhcc-CChhhhhhhhcccCCCeEE-----
Q 009196 178 REKKLIDFREKLYLAPLTTVGN------LPFRRVCKVLGADVTCGEMAMCTNLLQ-GQASEWALLRRHSSEDLFG----- 245 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~vtd------lpfR~l~~~~Gadl~~TEmi~a~~l~~-g~~~e~~ll~~~~~e~p~~----- 245 (540)
.++.+..+++|+++|||+++++ .++++.|+++|+.++++||.++ +.. +....+. ++....+.|++
T Consensus 50 ~~i~g~~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~~~~~q-l~~~~~d~pv~~~~~~ 126 (332)
T 1vcf_A 50 TPFLGKTLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEALRSFR-VRKVAPKALLIANLGL 126 (332)
T ss_dssp EEETTEEESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTTHHHHC-CTTTCSSSCEEEEEEG
T ss_pred eEECCcccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCccceEE-eeccCCCceeecccCh
Confidence 3566788999999999998775 4999999999999999999876 332 2333333 33333456775
Q ss_pred EEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEE-ecCCCCC
Q 009196 246 VQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIK-VRTGYFE 324 (540)
Q Consensus 246 vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVK-iR~G~~e 324 (540)
.|+++.+++.+.++++.+ ++|++.+|..+....+ . .|. .+.+.+.++++++++ +++||+|| +..|+
T Consensus 127 ~q~~~~~~~~~~~a~~~~----~~~a~~i~~n~~~~~~-~--~~~---~~~~~~~~~i~~vr~-~~~Pv~vK~v~~g~-- 193 (332)
T 1vcf_A 127 AQLRRYGRDDLLRLVEML----EADALAFHVNPLQEAV-Q--RGD---TDFRGLVERLAELLP-LPFPVMVKEVGHGL-- 193 (332)
T ss_dssp GGGGTCCHHHHHHHHHHH----TCSEEEEECCHHHHHH-T--TSC---CCCTTHHHHHHHHCS-CSSCEEEECSSSCC--
T ss_pred hhhhccChHHHHHHHhhc----CCCceeeccchHHHHh-c--CCC---ccHHHHHHHHHHHHc-CCCCEEEEecCCCC--
Confidence 788888899998887654 4676666554322111 1 111 112236789999999 99999999 54433
Q ss_pred ChhHHHHHHHHHHHcCCcEEEE--eccc--------ccC--------ccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCH
Q 009196 325 GKNRIDSLIADIGTWGASAVTV--HGRT--------RQQ--------RYSKLADWDYIYQCARKASDDLQVLGNGDIYSY 386 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItV--HgRt--------r~q--------~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~ 386 (540)
. .+.++.+.++|+|+|+| ||++ +.+ .+.+++.|+.+.++++.++ ++|||++|||.++
T Consensus 194 ~----~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~ 268 (332)
T 1vcf_A 194 S----REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTG 268 (332)
T ss_dssp C----HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSH
T ss_pred C----HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCH
Confidence 1 34578999999999999 6664 332 4567788999999999885 6999999999999
Q ss_pred HHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 009196 387 LDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGS 448 (540)
Q Consensus 387 eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~ 448 (540)
+|+.++|. .|||+|||||++|..+ ..+. ....+.++.++++++..+...|.
T Consensus 269 ~d~~kal~--~GAd~V~igr~~l~~~------~~G~---~gv~~~~~~l~~el~~~m~~~G~ 319 (332)
T 1vcf_A 269 TDGAKALA--LGADLLAVARPLLRPA------LEGA---ERVAAWIGDYLEELRTALFAIGA 319 (332)
T ss_dssp HHHHHHHH--HTCSEEEECGGGHHHH------TTCH---HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHH--hCCChHhhhHHHHHHH------hccH---HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998 5899999999877433 1111 12345667777777777777664
No 39
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.87 E-value=3.8e-21 Score=200.43 Aligned_cols=232 Identities=10% Similarity=0.035 Sum_probs=159.5
Q ss_pred ccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCCh----------------------hh-hhh
Q 009196 178 REKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQA----------------------SE-WAL 234 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~----------------------~e-~~l 234 (540)
.+.-+++|+||+++|.=+--.+..+-..+...|++.+.+..++..+. .|++ .. .+.
T Consensus 39 v~~~Gl~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq-~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~ 117 (354)
T 3tjx_A 39 VNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALR-EGNPTPRYQALPLGSINSMGLPNNGFDFYLAY 117 (354)
T ss_dssp EEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCB-CCSCSCCEEEETTEEEECCCCCBCCHHHHHHH
T ss_pred EEECCEEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCcccc-cCCCCCeEEEcccccccccccCCHHHHHHHHH
Confidence 47789999999999963212344343334457887666555443321 0110 00 111
Q ss_pred h--hcccCCCeEEEEecCCcHHHHHHHHHHHHHh--CCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc
Q 009196 235 L--RRHSSEDLFGVQICGAYPDTLARTVELIDQQ--CTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV 310 (540)
Q Consensus 235 l--~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~--aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v 310 (540)
+ .......|++++|.|.+++.+++.++.+.+. .++|.|+||++||... .|..|..+++.+.++++++++++
T Consensus 118 ~~~~~~~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~~ 192 (354)
T 3tjx_A 118 AAEQHDYGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEVY 192 (354)
T ss_dssp HHHTCCTTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHC
T ss_pred HHHhhccCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHHh
Confidence 1 2233467999999999999998888776532 2789999999999853 36678889999999999999999
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcC-CcEEEE----------e---------cccccCccCCCcCHHH----HHH
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWG-ASAVTV----------H---------GRTRQQRYSKLADWDY----IYQ 366 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaG-vdaItV----------H---------gRtr~q~y~g~adw~~----I~~ 366 (540)
..|+++|++.++++ ......+..+.+.+ ++.++. . +++..++++|++.|+. +++
T Consensus 193 ~~pv~vK~~p~~~~--~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~ 270 (354)
T 3tjx_A 193 PHSFGVKMPPYFDF--AAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINA 270 (354)
T ss_dssp CSCEEEEECCCCSH--HHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHH
T ss_pred hcccccccCCCCCc--hhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHH
Confidence 99999999998853 33444555555543 333332 1 1223466888888754 556
Q ss_pred HHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH-hCCCchHHHHh
Q 009196 367 CARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL-IKPWIFTEIKE 420 (540)
Q Consensus 367 i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL-~nPwif~eik~ 420 (540)
+++.++ .+||||+|||.|++|+.+++. .|||+||||||++ .+||+|.+|++
T Consensus 271 ~~~~~~-~~pIIg~GGI~s~~Da~e~i~--aGAs~Vqv~Ta~~y~GP~~~~~I~~ 322 (354)
T 3tjx_A 271 FYRRCP-GKLIFGCGGVYTGEDAFLHVL--AGASMVQVGTALQEEGPSIFERLTS 322 (354)
T ss_dssp HHHHCT-TSEEEEESSCCSHHHHHHHHH--HTEEEEEECHHHHHHCTTHHHHHHH
T ss_pred HHHhcC-CCcEEEeCCcCCHHHHHHHHH--cCCCEEEEChhhhhcCchHHHHHHH
Confidence 666665 799999999999999999997 7999999999975 68999999975
No 40
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.84 E-value=3.3e-20 Score=195.46 Aligned_cols=248 Identities=13% Similarity=0.050 Sum_probs=184.7
Q ss_pred ccccCcccCCcEEEccCCC--C----CCHHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCC
Q 009196 178 REKKLIDFREKLYLAPLTT--V----GNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGA 251 (540)
Q Consensus 178 ~e~~~l~lknrliLAPM~~--v----tdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~ 251 (540)
.++.+.+++.|+++|||.+ + ++.++++.|.++|+.++++++. +.++- + +... .+.+..+||+..
T Consensus 64 t~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s-~~~le-----~---i~~~-~~~~~~fQly~~ 133 (380)
T 1p4c_A 64 AEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTAS-NMSIE-----D---LARQ-CDGDLWFQLYVI 133 (380)
T ss_dssp EEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTC-SSCHH-----H---HHHH-CCSCEEEEECCS
T ss_pred eEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccc-cCCHH-----H---HHhc-cCCCeEEEEEec
Confidence 3566789999999999965 5 7899999999999999999743 22221 1 1111 367899999865
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEe--------------cCCCCCc---ccc--------c--CCccccc---cC---CchH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDI--------------NMGCPID---IVV--------N--KGAGSCL---LT---KPMR 298 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDI--------------N~GCP~~---~v~--------~--~G~GsaL---l~---~p~~ 298 (540)
..+...+..+++. .+|+..+.| |+||+.+ ... + ...+.++ +. +|.+
T Consensus 134 ~~~~~~~~i~~a~-~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~~~~~~~p~~ 212 (380)
T 1p4c_A 134 HREIAQGMVLKAL-HTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAALMSRQMDASF 212 (380)
T ss_dssp SHHHHHHHHHHHH-HTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHHTSSCCCTTC
T ss_pred hHHHHHHHHHHHH-HcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHHHHhhcCccc
Confidence 5555566666666 679887754 7799643 111 0 1222332 33 7777
Q ss_pred HHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE--ecccccCccCCCcCHHHHHHHHHHcCCCce
Q 009196 299 MKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV--HGRTRQQRYSKLADWDYIYQCARKASDDLQ 376 (540)
Q Consensus 299 l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV--HgRtr~q~y~g~adw~~I~~i~~~~~~~IP 376 (540)
..++|+.+++.+++||+||.-. ..+.++.+.++|+|+|+| ||+ .+.+.++++|+.+.++++.+ ++|
T Consensus 213 ~~~~i~~i~~~~~~Pv~vkgv~--------t~e~a~~a~~aGad~I~vs~~gg--~~~d~~~~~~~~l~~v~~~~--~~p 280 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVKGLL--------SAEDADRCIAEGADGVILSNHGG--RQLDCAISPMEVLAQSVAKT--GKP 280 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEEEEC--------CHHHHHHHHHTTCSEEEECCGGG--TSCTTCCCGGGTHHHHHHHH--CSC
T ss_pred cHHHHHHHHHhcCCCEEEEecC--------cHHHHHHHHHcCCCEEEEcCCCC--CcCCCCcCHHHHHHHHHHHc--CCe
Confidence 8899999999999999999521 246788999999999999 554 35667788999999999998 579
Q ss_pred EEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHH
Q 009196 377 VLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETT 456 (540)
Q Consensus 377 VIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~ 456 (540)
||++|||.+.+|+.+++. .|||+|||||+++... ...+. ....+.++.+.++++..+...|. .++..+
T Consensus 281 Via~GGI~~~~dv~kal~--~GAdaV~iGr~~l~~~-----~~~g~---~~v~~~~~~l~~el~~~m~~~G~--~~i~el 348 (380)
T 1p4c_A 281 VLIDSGFRRGSDIVKALA--LGAEAVLLGRATLYGL-----AARGE---TGVDEVLTLLKADIDRTLAQIGC--PDITSL 348 (380)
T ss_dssp EEECSSCCSHHHHHHHHH--TTCSCEEESHHHHHHH-----HHHHH---HHHHHHHHHHHHHHHHHHHHHTC--CBGGGC
T ss_pred EEEECCCCCHHHHHHHHH--hCCcHhhehHHHHHHH-----HhcCH---HHHHHHHHHHHHHHHHHHHHhCC--CCHHHh
Confidence 999999999999999997 7999999999998531 11121 13457788999999999999986 467777
Q ss_pred HHHH
Q 009196 457 RHFL 460 (540)
Q Consensus 457 R~~l 460 (540)
|+..
T Consensus 349 ~~~~ 352 (380)
T 1p4c_A 349 SPDY 352 (380)
T ss_dssp CGGG
T ss_pred ccCe
Confidence 7654
No 41
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.81 E-value=2.6e-19 Score=187.98 Aligned_cols=249 Identities=16% Similarity=0.133 Sum_probs=173.9
Q ss_pred cccCcccCCcEEEccCCCCCCHHH------HHHHHHhCCCEEEecccee--chhccCChhhhhhhhcccCCCeEE-----
Q 009196 179 EKKLIDFREKLYLAPLTTVGNLPF------RRVCKVLGADVTCGEMAMC--TNLLQGQASEWALLRRHSSEDLFG----- 245 (540)
Q Consensus 179 e~~~l~lknrliLAPM~~vtdlpf------R~l~~~~Gadl~~TEmi~a--~~l~~g~~~e~~ll~~~~~e~p~~----- 245 (540)
+..+..|+.|+++||||+.++.++ +++|+++|+.+.++||..+ ++.+.. ++..++......|+.
T Consensus 52 ~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~---s~~~vr~~ap~~~~~anlg~ 128 (368)
T 3vkj_A 52 KFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARE---SFAIVRKVAPTIPIIANLGM 128 (368)
T ss_dssp EETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSH---HHHHHHHHCSSSCEEEEEEG
T ss_pred EECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHh---hHHHHHHhCcCcceecCcCe
Confidence 455889999999999999998884 9999999999999999655 443322 222233223344443
Q ss_pred EEecC-CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCch-HHHHHHHHhcccccccEEEEecCCCC
Q 009196 246 VQICG-AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPM-RMKGIIEATSGTVDKPITIKVRTGYF 323 (540)
Q Consensus 246 vQL~G-~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~-~l~eIv~av~~~v~iPVtVKiR~G~~ 323 (540)
+||.+ .+++.+.++++.+ .+|+..|+||. ...+.. ..|. .+.. ...++|+.+++.+++||.||. +|+.
T Consensus 129 ~ql~~~~~~~~~~~av~~~--~a~al~Ihln~---~~~~~~-p~g~---~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g 198 (368)
T 3vkj_A 129 PQLVKGYGLKEFQDAIQMI--EADAIAVHLNP---AQEVFQ-PEGE---PEYQIYALEKLRDISKELSVPIIVKE-SGNG 198 (368)
T ss_dssp GGGGTTCCHHHHHHHHHHT--TCSEEEEECCH---HHHHHS-SSCC---CBCBTHHHHHHHHHHTTCSSCEEEEC-SSSC
T ss_pred eecCCCCCHHHHHHHHHHh--cCCCeEEEecc---hhhhhC-CCCC---chhhHHHHHHHHHHHHHcCCCEEEEe-CCCC
Confidence 57766 7889988988876 35666777773 222221 1221 1222 477889999999999999997 5543
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEec--cc--------ccC--------ccCCCcCH-----HHHHHHHHHcCCCceEEEe
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHG--RT--------RQQ--------RYSKLADW-----DYIYQCARKASDDLQVLGN 380 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHg--Rt--------r~q--------~y~g~adw-----~~I~~i~~~~~~~IPVIgN 380 (540)
-. .+.|+.+.++|+|+|+|+| +| |.. .+....+| ..+.++++.++ ++|||++
T Consensus 199 ~s----~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~ipvia~ 273 (368)
T 3vkj_A 199 IS----METAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DSFLVGS 273 (368)
T ss_dssp CC----HHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TCEEEEE
T ss_pred CC----HHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CCcEEEE
Confidence 22 4678999999999999954 43 211 12222334 67888988885 6999999
Q ss_pred CCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHHHH
Q 009196 381 GDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETTRH 458 (540)
Q Consensus 381 GdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~R~ 458 (540)
|||.+..|+.+++. .|||+||+||++|. ... .+. ....+.++.+.++++..+...|.. -+..+|+
T Consensus 274 GGI~~~~d~~kal~--lGA~~v~ig~~~l~-----~~~-~G~---~~v~~~l~~l~~eL~~~m~~~G~~--~i~el~~ 338 (368)
T 3vkj_A 274 GGIRSGLDAAKAIA--LGADIAGMALPVLK-----SAI-EGK---ESLEQFFRKIIFELKAAMMLTGSK--DVDALKK 338 (368)
T ss_dssp SSCCSHHHHHHHHH--HTCSEEEECHHHHH-----HHH-HCH---HHHHHHHHHHHHHHHHHHHHTTCC--BHHHHHT
T ss_pred CCCCCHHHHHHHHH--cCCCEEEEcHHHHH-----HHh-cCh---HHHHHHHHHHHHHHHHHHHHhCCC--CHHHhcc
Confidence 99999999999998 69999999997653 222 111 112456788888888888888853 3555554
No 42
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.80 E-value=1.1e-18 Score=180.30 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=148.2
Q ss_pred cccCCcEEEccCCCCCCHHHHHHHHHhCC-CEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHH
Q 009196 183 IDFREKLYLAPLTTVGNLPFRRVCKVLGA-DVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVE 261 (540)
Q Consensus 183 l~lknrliLAPM~~vtdlpfR~l~~~~Ga-dl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~ 261 (540)
+.++.++++|||.++++..++..+.+.|+ +++.++++..+.+. .....++.. .+.|+++||+..+++ +.+.++
T Consensus 9 l~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~----~~i~~i~~~-~~~p~gvnl~~~~~~-~~~~~~ 82 (332)
T 2z6i_A 9 LKIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVK----ANIDKIKSL-TDKPFGVNIMLLSPF-VEDIVD 82 (332)
T ss_dssp HTCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHH----HHHHHHHHH-CCSCEEEEECTTSTT-HHHHHH
T ss_pred hCCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHH----HHHHHHHHh-cCCCEEEEecCCCCC-HHHHHH
Confidence 44788999999999999999998888875 88888876544331 111222221 357999999986654 666777
Q ss_pred HHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCC
Q 009196 262 LIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGA 341 (540)
Q Consensus 262 ~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGv 341 (540)
++. ++|+|+|.+|+|||. ++++.+++ .++||.+|+.. .+.++.++++|+
T Consensus 83 ~a~-~~g~d~V~~~~g~p~--------------------~~i~~l~~-~g~~v~~~v~~---------~~~a~~~~~~Ga 131 (332)
T 2z6i_A 83 LVI-EEGVKVVTTGAGNPS--------------------KYMERFHE-AGIIVIPVVPS---------VALAKRMEKIGA 131 (332)
T ss_dssp HHH-HTTCSEEEECSSCGG--------------------GTHHHHHH-TTCEEEEEESS---------HHHHHHHHHTTC
T ss_pred HHH-HCCCCEEEECCCChH--------------------HHHHHHHH-cCCeEEEEeCC---------HHHHHHHHHcCC
Confidence 776 689999999999982 23455554 37899988732 356788899999
Q ss_pred cEEEEecccccCccCC-CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 342 SAVTVHGRTRQQRYSK-LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 342 daItVHgRtr~q~y~g-~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
|+|.++|+.. +++.+ ..+|+++.++++.+ ++|||++|||.+++++.+++. .|||+|++||+++.+|...
T Consensus 132 D~i~v~g~~~-GG~~g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~--~GAdgV~vGs~~l~~~e~~ 201 (332)
T 2z6i_A 132 DAVIAEGMEA-GGHIGKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFM--LGAEAVQVGTRFVVAKESN 201 (332)
T ss_dssp SCEEEECTTS-SEECCSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHH--TTCSEEEECHHHHTBTTCC
T ss_pred CEEEEECCCC-CCCCCCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH--cCCCEEEecHHHhcCcccc
Confidence 9999998732 33333 56799999999988 799999999999999999887 6899999999999999654
No 43
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.76 E-value=1.1e-18 Score=171.52 Aligned_cols=193 Identities=11% Similarity=-0.015 Sum_probs=142.3
Q ss_pred EEEccCCCCCCHHHHHHHH---HhCCCE--EEecccee-chhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHH
Q 009196 189 LYLAPLTTVGNLPFRRVCK---VLGADV--TCGEMAMC-TNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVEL 262 (540)
Q Consensus 189 liLAPM~~vtdlpfR~l~~---~~Gadl--~~TEmi~a-~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~ 262 (540)
.+|.|+ .|+.+||++|+ ++|++. ++++|+.. ...+. ...+.. ..+.|+++|+.+..+... +.
T Consensus 11 t~l~p~--~t~~~i~~l~~~a~~~g~~~v~v~~~~v~~~~~~l~----~v~v~~--v~~~P~g~~~~~~k~~~~----~~ 78 (225)
T 1mzh_A 11 AALKPH--LSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAK----KVKVCC--VIGFPLGLNKTSVKVKEA----VE 78 (225)
T ss_dssp EECCTT--CCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHCS----SSEEEE--EESTTTCCSCHHHHHHHH----HH
T ss_pred cccCCC--CCHHHHHHHHHHHHHhCCeEEEECHHHHHHHHHHhc----CCceee--EecCCCCccchhhhHHHH----HH
Confidence 457886 68999999998 689987 45667654 33333 111111 114566667666554443 34
Q ss_pred HHHhCCCCEEE--ecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEe---cCCCCCChhHHHHHHHHHH
Q 009196 263 IDQQCTVDFID--INMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKV---RTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 263 ~~~~aG~D~ID--IN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKi---R~G~~e~~~~~~~la~~le 337 (540)
+. +.|+|+|| ||+|| . +.| +++.+.+.+++++++++ |+++|+ +.+++ .++...+++.++
T Consensus 79 A~-~~Gad~Id~viN~g~----~-~~~-------~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~--~~~~~~~a~~a~ 142 (225)
T 1mzh_A 79 AV-RDGAQELDIVWNLSA----F-KSE-------KYDFVVEELKEIFRETP-SAVHKVIVETPYLN--EEEIKKAVEICI 142 (225)
T ss_dssp HH-HTTCSEEEEECCHHH----H-HTT-------CHHHHHHHHHHHHHTCT-TSEEEEECCGGGCC--HHHHHHHHHHHH
T ss_pred HH-HcCCCEEEEEecHHH----H-hcC-------ChHHHHHHHHHHHHHhc-CceEEEEEeCCCCC--HHHHHHHHHHHH
Confidence 44 47999999 89999 1 122 34677788999999888 999999 77764 356889999999
Q ss_pred HcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHH
Q 009196 338 TWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTE 417 (540)
Q Consensus 338 eaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~e 417 (540)
++|+|+| +|..+.+.+.+.|+.++.+++.++.++||+++|||.|++|+.++++ .|||.|.++++. +|+++
T Consensus 143 eaGad~I----~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~--aGA~~iG~s~~~----~i~~~ 212 (225)
T 1mzh_A 143 EAGADFI----KTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIE--AGADRIGTSSGI----SIAEE 212 (225)
T ss_dssp HHTCSEE----ECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHH--TTCSEEEESCHH----HHHHH
T ss_pred HhCCCEE----EECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHH--hCchHHHHccHH----HHHHH
Confidence 9999999 3333556677899999999998855799999999999999999997 799987777763 56766
Q ss_pred HH
Q 009196 418 IK 419 (540)
Q Consensus 418 ik 419 (540)
++
T Consensus 213 ~~ 214 (225)
T 1mzh_A 213 FL 214 (225)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 44
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.75 E-value=5.8e-18 Score=177.43 Aligned_cols=243 Identities=15% Similarity=0.149 Sum_probs=148.1
Q ss_pred cccCcccCCcEEEccCCCCCCHH------HHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCc
Q 009196 179 EKKLIDFREKLYLAPLTTVGNLP------FRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAY 252 (540)
Q Consensus 179 e~~~l~lknrliLAPM~~vtdlp------fR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~ 252 (540)
++.+..|+.|+++|||++.+..+ |++.|+++|..+.+++|..+-.--. ...+.+.+.. .+.+++..|....
T Consensus 79 ~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~~~--~~~~~v~r~~-P~~~~ianig~~~ 155 (365)
T 3sr7_A 79 HFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKNPD--DTSYQVKKSR-PHLLLATNIGLDK 155 (365)
T ss_dssp EETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC--------------------------CCEEEEEETTS
T ss_pred EECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccCcc--ccceEehhhC-CCCcEEEEeCCCC
Confidence 45567899999999999988755 9999999999999999976432111 1222233333 4567778887644
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSL 332 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~l 332 (540)
+.+ ++.+.++ ..|+|++.||+-.....+... | -.+.+-+.+.|+.+++.+++||.||. .|+... .+.
T Consensus 156 ~~e--~~~~~ve-~~~adal~ihln~~qe~~~p~--G---d~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s----~e~ 222 (365)
T 3sr7_A 156 PYQ--AGLQAVR-DLQPLFLQVHINLMQELLMPE--G---EREFRSWKKHLSDYAKKLQLPFILKE-VGFGMD----VKT 222 (365)
T ss_dssp CHH--HHHHHHH-HHCCSCEEEEECHHHHHTSSS--S---CCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCC----HHH
T ss_pred CHH--HHHHHHH-hcCCCEEEEeccccccccCCC--C---CCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCC----HHH
Confidence 322 3333333 457888877765432222111 1 13344577889999999999999995 454322 367
Q ss_pred HHHHHHcCCcEEEEecccccCc----------cCCCcCH-----HHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC
Q 009196 333 IADIGTWGASAVTVHGRTRQQR----------YSKLADW-----DYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP 397 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr~q~----------y~g~adw-----~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ 397 (540)
|+.+.++|+|+|+|+|+...+. +...++| ..+.+++... .++|||++|||.+..|+.++|. .
T Consensus 223 A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~-~~ipvia~GGI~~g~Dv~KaLa--l 299 (365)
T 3sr7_A 223 IQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLM-DKVEILASGGIRHPLDIIKALV--L 299 (365)
T ss_dssp HHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGT-TTSEEEECSSCCSHHHHHHHHH--H
T ss_pred HHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhc-CCCeEEEeCCCCCHHHHHHHHH--c
Confidence 8899999999999977633221 1222233 5666664433 3699999999999999999998 7
Q ss_pred CcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 009196 398 ELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGS 448 (540)
Q Consensus 398 gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~ 448 (540)
|||+|||||++|. .....+. ....+.++.++++++..+...|.
T Consensus 300 GAdaV~ig~~~l~-----a~~~~G~---~~v~~~l~~l~~eL~~~m~~~G~ 342 (365)
T 3sr7_A 300 GAKAVGLSRTMLE-----LVEQHSV---HEVIAIVNGWKEDLRLIMCALNC 342 (365)
T ss_dssp TCSEEEESHHHHH-----HHHHSCH---HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECHHHHH-----HHHhcCh---HHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999997653 3222211 11245677777777777777775
No 45
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.73 E-value=7.2e-17 Score=167.23 Aligned_cols=195 Identities=13% Similarity=0.088 Sum_probs=144.9
Q ss_pred cccCcccCCcEEEccCCCCCCHHHHH-HHHHhCCCEEEeccceechhccCChhhhhhhhcc-cCCCeEEEEecCCcHHHH
Q 009196 179 EKKLIDFREKLYLAPLTTVGNLPFRR-VCKVLGADVTCGEMAMCTNLLQGQASEWALLRRH-SSEDLFGVQICGAYPDTL 256 (540)
Q Consensus 179 e~~~l~lknrliLAPM~~vtdlpfR~-l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~-~~e~p~~vQL~G~~p~~~ 256 (540)
++.++.+++|+++|||+++++..|++ +++.+|.++++++|... ...++++. ..+.++++|+ |..++.+
T Consensus 39 ~i~g~~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~---------~~~~i~~~~~~g~~v~v~~-g~~~~~~ 108 (336)
T 1ypf_A 39 TLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEK---------RISFIRDMQSRGLIASISV-GVKEDEY 108 (336)
T ss_dssp EETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGG---------HHHHHHHHHHTTCCCEEEE-CCSHHHH
T ss_pred EECCEEecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHH---------HHHHHHHHHhcCCeEEEeC-CCCHHHH
Confidence 44568899999999999999999965 57777888888776421 11223322 2345789995 7777777
Q ss_pred HHHHHHHHHhCC--CCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHH
Q 009196 257 ARTVELIDQQCT--VDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIA 334 (540)
Q Consensus 257 a~AA~~~~~~aG--~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~ 334 (540)
..+ +.+. ++| +++|+||+++ | ++....++++.+++.++.|+.+|-. .. ..+.|+
T Consensus 109 ~~a-~~~~-~~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G~--v~-----s~e~A~ 164 (336)
T 1ypf_A 109 EFV-QQLA-AEHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAGN--VG-----TPEAVR 164 (336)
T ss_dssp HHH-HHHH-HTTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEEE--EC-----SHHHHH
T ss_pred HHH-HHHH-hcCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEECC--cC-----CHHHHH
Confidence 654 4444 467 9999999752 2 5778889999999988544444421 11 146789
Q ss_pred HHHHcCCcEEEE--eccc----ccCccCCCc--CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 335 DIGTWGASAVTV--HGRT----RQQRYSKLA--DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 335 ~leeaGvdaItV--HgRt----r~q~y~g~a--dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
++.++|||+|++ |+++ +.+.+.+.+ .|+.+.++++.+ ++|||++|||.+..|+.+++. .|||+|||||
T Consensus 165 ~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kala--lGAdaV~iGr 240 (336)
T 1ypf_A 165 ELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIR--FGATMVMIGS 240 (336)
T ss_dssp HHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHH--TTCSEEEESG
T ss_pred HHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHH--cCCCEEEeCh
Confidence 999999999999 6542 222233334 688999999988 799999999999999999997 6999999999
Q ss_pred HHHhC
Q 009196 407 GALIK 411 (540)
Q Consensus 407 gaL~n 411 (540)
+++.-
T Consensus 241 ~~l~t 245 (336)
T 1ypf_A 241 LFAGH 245 (336)
T ss_dssp GGTTC
T ss_pred hhhcc
Confidence 99953
No 46
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.68 E-value=8.6e-17 Score=177.07 Aligned_cols=206 Identities=13% Similarity=0.083 Sum_probs=149.3
Q ss_pred HhCCC-EEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHH---------HHHHHHHHHHhCCCCEEEecCC
Q 009196 208 VLGAD-VTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDT---------LARTVELIDQQCTVDFIDINMG 277 (540)
Q Consensus 208 ~~Gad-l~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~---------~a~AA~~~~~~aG~D~IDIN~G 277 (540)
+.||+ +++.++..+.....+......+++.-....++-+|+.|.-.+. +.+.|+.+. .+|+|.|.||++
T Consensus 291 ~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l-~aGad~V~igt~ 369 (555)
T 1jvn_A 291 QQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF-RSGADKVSIGTD 369 (555)
T ss_dssp HTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH-HHTCSEEEECHH
T ss_pred HcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH-HcCCCEEEECCH
Confidence 35885 6777766543221112223344544444556778999875331 334454444 569999999999
Q ss_pred CCCcccccCCccccccCCchHHHHHHHHhcc-cc--cccE-------------------------------EEEecCCCC
Q 009196 278 CPIDIVVNKGAGSCLLTKPMRMKGIIEATSG-TV--DKPI-------------------------------TIKVRTGYF 323 (540)
Q Consensus 278 CP~~~v~~~G~GsaLl~~p~~l~eIv~av~~-~v--~iPV-------------------------------tVKiR~G~~ 323 (540)
| ..+..+-+.++.++.+|+++.++.+..-. .+ .+.+ .| ++.||.
T Consensus 370 ~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v-~~~Gw~ 447 (555)
T 1jvn_A 370 A-VYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQC-TIKGGR 447 (555)
T ss_dssp H-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEE-EETTTT
T ss_pred H-hhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCcceeEEE-EEecCc
Confidence 9 33332233455578999999999987632 22 2111 22 334776
Q ss_pred CCh-hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 324 EGK-NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 324 e~~-~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
+.. .++.++++.++++|++.|++|++++.+.+.| .||+.++++++.+ ++|||++|||.|++|+.++++. +|||+|
T Consensus 448 ~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~~--~iPVIasGGi~s~~d~~~~~~~-~G~~gv 523 (555)
T 1jvn_A 448 ESRDLGVWELTRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDAV--KIPVIASSGAGVPEHFEEAFLK-TRADAC 523 (555)
T ss_dssp EEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHHC--SSCEEECSCCCSHHHHHHHHHH-SCCSEE
T ss_pred cCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHhC--CccEEEECCCCCHHHHHHHHHh-cCChHH
Confidence 532 3578999999999999999999999999988 5999999999998 7999999999999999998875 799999
Q ss_pred eecHHHHhCCCchHHHHh
Q 009196 403 MIARGALIKPWIFTEIKE 420 (540)
Q Consensus 403 MIGRgaL~nPwif~eik~ 420 (540)
|+||+++.+||.|.++++
T Consensus 524 ivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 524 LGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp EESHHHHTTSCCHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHH
Confidence 999999999999999875
No 47
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.68 E-value=1.5e-15 Score=158.30 Aligned_cols=253 Identities=12% Similarity=0.011 Sum_probs=181.7
Q ss_pred cccCcccCCcEEEccCCCCC------CHHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCC-
Q 009196 179 EKKLIDFREKLYLAPLTTVG------NLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGA- 251 (540)
Q Consensus 179 e~~~l~lknrliLAPM~~vt------dlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~- 251 (540)
++=+.++.-|+++||+.... +...-+-|.+.|.-++.|-+.++. .. -+.....+.+..+||+-.
T Consensus 62 ~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~s------~e---~v~~~~~~~~~wfQlY~~~ 132 (352)
T 3sgz_A 62 TIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYS------LE---DIVAAAPEGFRWFQLYMKS 132 (352)
T ss_dssp EETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSSC------HH---HHHHHSTTCEEEEECCCCS
T ss_pred EECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCCC------HH---HHHHhccCccceeccccCC
Confidence 44567888999999987543 356667777788877766554322 11 122233456899999865
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccc----cCC-------------------cccc---ccCCchHHHHHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVV----NKG-------------------AGSC---LLTKPMRMKGIIEA 305 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~----~~G-------------------~Gsa---Ll~~p~~l~eIv~a 305 (540)
+.+......++++ .+||..|=|-.-.|..-.+ +.| .++. -.-+|.+.-+.|+.
T Consensus 133 d~~~~~~l~~ra~-~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~w~~i~~ 211 (352)
T 3sgz_A 133 DWDFNKQMVQRAE-ALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKASFCWNDLSL 211 (352)
T ss_dssp CHHHHHHHHHHHH-HTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCTTCCHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCCCCCHHHHHH
Confidence 4555666667776 7899988777666643111 000 0111 12356677788999
Q ss_pred hcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCC
Q 009196 306 TSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYS 385 (540)
Q Consensus 306 v~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s 385 (540)
+++.+++||.||.... .+.|+.+.++|+|+|+|+++...|.+.+++.|+.+.++++.+..++|||++|||.+
T Consensus 212 lr~~~~~PvivK~v~~--------~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~~ 283 (352)
T 3sgz_A 212 LQSITRLPIILKGILT--------KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRT 283 (352)
T ss_dssp HHHHCCSCEEEEEECS--------HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCCS
T ss_pred HHHhcCCCEEEEecCc--------HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 9999999999998753 35688999999999999877666777788999999999998865799999999999
Q ss_pred HHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHH
Q 009196 386 YLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSDKKGVETTRHFLL 461 (540)
Q Consensus 386 ~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d~~gv~~~R~~l~ 461 (540)
.+|+.++|. .|||+|||||++|..+. ..+. ....+.+++++++++..+...|. ..+..+|+.++
T Consensus 284 g~Dv~kaLa--lGA~aV~iGr~~l~~l~-----~~G~---~gv~~~l~~l~~el~~~m~~~G~--~~i~el~~~~~ 347 (352)
T 3sgz_A 284 GTDVLKALA--LGARCIFLGRPILWGLA-----CKGE---DGVKEVLDILTAELHRCMTLSGC--QSVAEISPDLI 347 (352)
T ss_dssp HHHHHHHHH--TTCSEEEESHHHHHHHH-----HHHH---HHHHHHHHHHHHHHHHHHHHHTC--SBGGGCCGGGB
T ss_pred HHHHHHHHH--cCCCEEEECHHHHHHHH-----hcCc---HHHHHHHHHHHHHHHHHHHHhCC--CcHHHHhhhcc
Confidence 999999997 79999999998764332 2221 12346788999999988888885 34666666654
No 48
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.66 E-value=2.2e-15 Score=155.54 Aligned_cols=191 Identities=15% Similarity=0.168 Sum_probs=141.5
Q ss_pred CcccCCcEEEccCCCCCCHHHHHHHHHhCC-CEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHH
Q 009196 182 LIDFREKLYLAPLTTVGNLPFRRVCKVLGA-DVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTV 260 (540)
Q Consensus 182 ~l~lknrliLAPM~~vtdlpfR~l~~~~Ga-dl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA 260 (540)
.+.++.|+++|||+++++..++..+.+.|+ +++.+.++..+.+. .....++. ..+.|++|+++..+++ +.+.+
T Consensus 22 ~l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~----~~i~~i~~-~~~~p~gVnl~~~~~~-~~~~~ 95 (326)
T 3bo9_A 22 LLEIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLR----KAISELRQ-KTDKPFGVNIILVSPW-ADDLV 95 (326)
T ss_dssp HHTCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHH----HHHHHHHT-TCSSCEEEEEETTSTT-HHHHH
T ss_pred hcCCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHH----HHHHHHHH-hcCCCEEEEEeccCCC-HHHHH
Confidence 467789999999999999999999888774 77766654333211 11122222 1357999999986553 34445
Q ss_pred HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcC
Q 009196 261 ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWG 340 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaG 340 (540)
+.+. ++|+|+|.+|+|||.. +++.+++ .+++|.+++.. .+.++.+.++|
T Consensus 96 ~~~~-~~g~d~V~l~~g~p~~--------------------~~~~l~~-~g~~v~~~v~s---------~~~a~~a~~~G 144 (326)
T 3bo9_A 96 KVCI-EEKVPVVTFGAGNPTK--------------------YIRELKE-NGTKVIPVVAS---------DSLARMVERAG 144 (326)
T ss_dssp HHHH-HTTCSEEEEESSCCHH--------------------HHHHHHH-TTCEEEEEESS---------HHHHHHHHHTT
T ss_pred HHHH-HCCCCEEEECCCCcHH--------------------HHHHHHH-cCCcEEEEcCC---------HHHHHHHHHcC
Confidence 5555 5799999999998831 2333333 37788887632 35577888999
Q ss_pred CcEEEEecccccCccCC-CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 341 ASAVTVHGRTRQQRYSK-LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 341 vdaItVHgRtr~q~y~g-~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
+|+|.++++.. ++++| ..+|+.+.++++.+ ++|||+.|||.+.+++.+++. .|||+|++|++++..|..
T Consensus 145 aD~i~v~g~~~-GG~~G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~--~GA~gV~vGs~~~~~~e~ 214 (326)
T 3bo9_A 145 ADAVIAEGMES-GGHIGEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFA--LGAEAVQMGTRFVASVES 214 (326)
T ss_dssp CSCEEEECTTS-SEECCSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHTBSSC
T ss_pred CCEEEEECCCC-CccCCCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHH--hCCCEEEechHHHcCccc
Confidence 99999998753 23333 46899999999988 799999999999999999887 699999999999998863
No 49
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.66 E-value=3.9e-17 Score=163.82 Aligned_cols=189 Identities=11% Similarity=0.037 Sum_probs=133.9
Q ss_pred HHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc
Q 009196 202 FRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPID 281 (540)
Q Consensus 202 fR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~ 281 (540)
+-+...+.||+.++.-++.+ .+....+.+ ..+.++.+|+.|.-. .. .+.+++ +|+|-|-|
T Consensus 43 ~A~~~~~~Ga~~l~vvDL~~-----~n~~~i~~i---~~~~~~pv~vgGGir-~~-~~~~~l---~Ga~~Vii------- 102 (260)
T 2agk_A 43 YAKLYKDRDVQGCHVIKLGP-----NNDDAAREA---LQESPQFLQVGGGIN-DT-NCLEWL---KWASKVIV------- 102 (260)
T ss_dssp HHHHHHHTTCTTCEEEEESS-----SCHHHHHHH---HHHSTTTSEEESSCC-TT-THHHHT---TTCSCEEE-------
T ss_pred HHHHHHHcCCCEEEEEeCCC-----CCHHHHHHH---HhcCCceEEEeCCCC-HH-HHHHHh---cCCCEEEE-------
Confidence 33555667998666555553 122221212 122345578888765 34 666555 58887754
Q ss_pred ccccCCccccccCC-----chHHHHHHHHhc-ccccccEEEEec---------CCCCCCh-hHHH-HHHHHHHHcCCcEE
Q 009196 282 IVVNKGAGSCLLTK-----PMRMKGIIEATS-GTVDKPITIKVR---------TGYFEGK-NRID-SLIADIGTWGASAV 344 (540)
Q Consensus 282 ~v~~~G~GsaLl~~-----p~~l~eIv~av~-~~v~iPVtVKiR---------~G~~e~~-~~~~-~la~~leeaGvdaI 344 (540)
|++++++ |+++.++++.+. +.+-+++.+|+| .||.+.. .++. ++++.++++ ++.|
T Consensus 103 -------gs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~i 174 (260)
T 2agk_A 103 -------TSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEF 174 (260)
T ss_dssp -------CGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEE
T ss_pred -------CcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEE
Confidence 7888899 999999999997 544344444422 2676532 2556 899999999 9999
Q ss_pred EEecccccCccCCCcCHHHHHHHHHHcCC--CceEEEeCCCCCHHHHHHHHhcCC-CcCeeeecHHH--HhCC-CchHHH
Q 009196 345 TVHGRTRQQRYSKLADWDYIYQCARKASD--DLQVLGNGDIYSYLDWNKHKSDCP-ELASCMIARGA--LIKP-WIFTEI 418 (540)
Q Consensus 345 tVHgRtr~q~y~g~adw~~I~~i~~~~~~--~IPVIgNGdI~s~eDa~~~l~~~~-gaDgVMIGRga--L~nP-wif~ei 418 (540)
++|++++.++++|+ ||+.++++++.++. ++|||++|||.|++|+.++++. + ||++||+||++ +.+| |.|.++
T Consensus 175 l~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~-~~G~~gvivg~al~l~~g~~~~~~~~ 252 (260)
T 2agk_A 175 LIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDEL-SHGKVDLTFGSSLDIFGGNLVKFEDC 252 (260)
T ss_dssp EEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHH-HTTCEEEECCTTBGGGTCSSBCHHHH
T ss_pred EEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHh-cCCCCEEEeeCCHHHcCCCCCCHHHH
Confidence 99999999999986 99999999998721 3999999999999999998874 5 99999999997 9999 999998
Q ss_pred Hh
Q 009196 419 KE 420 (540)
Q Consensus 419 k~ 420 (540)
++
T Consensus 253 ~~ 254 (260)
T 2agk_A 253 CR 254 (260)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 50
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.66 E-value=7.9e-16 Score=150.87 Aligned_cols=156 Identities=13% Similarity=0.186 Sum_probs=126.7
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc----ccc---
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV----DKP--- 313 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v----~iP--- 313 (540)
..|+.+-.+=.+++++. .+. .+|+|.|-+ |+.++.+|+++.++++.+...+ +.+
T Consensus 74 ~ipv~v~ggi~~~~~~~----~~l-~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~ 134 (244)
T 2y88_A 74 DVQVELSGGIRDDESLA----AAL-ATGCARVNV--------------GTAALENPQWCARVIGEHGDQVAVGLDVQIID 134 (244)
T ss_dssp SSEEEEESSCCSHHHHH----HHH-HTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCcEEEECCCCCHHHHH----HHH-HcCCCEEEE--------------CchHhhChHHHHHHHHHcCCCEEEEEeccccC
Confidence 55666544446666532 233 469999987 5667889999999998875332 333
Q ss_pred --EEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH
Q 009196 314 --ITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNK 391 (540)
Q Consensus 314 --VtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~ 391 (540)
.+||+| ||.+...+..++++.++++|++.|.+|+|++.+.+.++ +|+.++++++.+ ++|||++|||.+++|+.+
T Consensus 135 ~~~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~ 210 (244)
T 2y88_A 135 GEHRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGP-NLDLLAGVADRT--DAPVIASGGVSSLDDLRA 210 (244)
T ss_dssp TEEEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCC-CHHHHHHHHTTC--SSCEEEESCCCSHHHHHH
T ss_pred CCCEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCC-CHHHHHHHHHhC--CCCEEEECCCCCHHHHHH
Confidence 478899 88765557889999999999999999999998888774 999999999877 799999999999999999
Q ss_pred HHhcCC--CcCeeeecHHHHhCCCchHHHHh
Q 009196 392 HKSDCP--ELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 392 ~l~~~~--gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+++. + |||+||+||+++.+||.|.++++
T Consensus 211 ~~~~-~~~Gad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 211 IATL-THRGVEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp HHTT-GGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred HHhh-ccCCCCEEEEcHHHHCCCcCHHHHHH
Confidence 8763 4 99999999999999999999875
No 51
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.64 E-value=6.9e-15 Score=153.90 Aligned_cols=190 Identities=14% Similarity=0.131 Sum_probs=138.9
Q ss_pred CCcEEEccCCC-CCCHHHHHHHHHhCC-CEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHH---------
Q 009196 186 REKLYLAPLTT-VGNLPFRRVCKVLGA-DVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPD--------- 254 (540)
Q Consensus 186 knrliLAPM~~-vtdlpfR~l~~~~Ga-dl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~--------- 254 (540)
+.++++|||++ +++..++..+.+.|+ +++.++|.+.+.+... ...++.. .+.||+|+|+...+.
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~----i~~~~~~-~~~p~gVnl~~~~~~~~~~~~~~~ 84 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQE----IKRLRGL-TGRPFGVNVFMPQPELAESGAVEV 84 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHH----HHHHHHH-CCSCEEEEEECCCCCC---CHHHH
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHH----HHHHHHh-CCCCeEEEEecCCCCcccHHHHHH
Confidence 77899999995 999999988887764 7887777666544211 1112211 236899999876431
Q ss_pred -------------------------HHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc
Q 009196 255 -------------------------TLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT 309 (540)
Q Consensus 255 -------------------------~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~ 309 (540)
.+...++.+. ++|+|+|.+|+|||.. ++++.+++
T Consensus 85 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~V~~~~g~~~~-------------------~~i~~~~~- 143 (369)
T 3bw2_A 85 YAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLL-DDPVPVVSFHFGVPDR-------------------EVIARLRR- 143 (369)
T ss_dssp HHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHH-HSCCSEEEEESSCCCH-------------------HHHHHHHH-
T ss_pred HHHHHHHHHHHcCCCcCcccccccccHHHHHHHHH-hcCCCEEEEeCCCCcH-------------------HHHHHHHH-
Confidence 1344555665 6799999999999841 23444443
Q ss_pred ccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCC------------CcCHHHHHHHHHHcCCCceE
Q 009196 310 VDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSK------------LADWDYIYQCARKASDDLQV 377 (540)
Q Consensus 310 v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g------------~adw~~I~~i~~~~~~~IPV 377 (540)
.+++|.+++.. .+.++.++++|+|+|.++++.. +++.+ ...|+.+.++++.+ ++||
T Consensus 144 ~g~~v~~~v~t---------~~~a~~a~~~GaD~i~v~g~~~-GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPV 211 (369)
T 3bw2_A 144 AGTLTLVTATT---------PEEARAVEAAGADAVIAQGVEA-GGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPV 211 (369)
T ss_dssp TTCEEEEEESS---------HHHHHHHHHTTCSEEEEECTTC-SEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCE
T ss_pred CCCeEEEECCC---------HHHHHHHHHcCCCEEEEeCCCc-CCcCCCcccccccccccccHHHHHHHHHHhc--CceE
Confidence 37788886632 2347788999999999987542 11111 12399999999988 7999
Q ss_pred EEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 378 LGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 378 IgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
|+.|||.+++++.+++. .|||+|++||+++.+|+..
T Consensus 212 iaaGGI~~~~~~~~~l~--~GAd~V~vGs~~~~~~e~~ 247 (369)
T 3bw2_A 212 VAAGGIMRGGQIAAVLA--AGADAAQLGTAFLATDESG 247 (369)
T ss_dssp EEESSCCSHHHHHHHHH--TTCSEEEESHHHHTSTTCC
T ss_pred EEECCCCCHHHHHHHHH--cCCCEEEEChHHhCCcccC
Confidence 99999999999999987 6899999999999999874
No 52
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.63 E-value=6.2e-15 Score=151.71 Aligned_cols=189 Identities=12% Similarity=0.050 Sum_probs=139.6
Q ss_pred cccCCcEEEccCCCCCCHHHHHHHHHhC-CCEEEeccce-echhccCChhhhhhhhcccCCCeEEEEecCC----cHHHH
Q 009196 183 IDFREKLYLAPLTTVGNLPFRRVCKVLG-ADVTCGEMAM-CTNLLQGQASEWALLRRHSSEDLFGVQICGA----YPDTL 256 (540)
Q Consensus 183 l~lknrliLAPM~~vtdlpfR~l~~~~G-adl~~TEmi~-a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~----~p~~~ 256 (540)
+.++.++++|||+++++..++..+.+.| .+++.+++.. .+.+. .....++.. .+.|++++++.+ .++ +
T Consensus 12 l~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~----~~i~~i~~~-~~~p~~v~l~v~~~~~~~~-~ 85 (328)
T 2gjl_A 12 FGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALA----AEIARCREL-TDRPFGVNLTLLPTQKPVP-Y 85 (328)
T ss_dssp HTCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHH----HHHHHHHHH-CSSCCEEEEEECCCSSCCC-H
T ss_pred hCCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHH----HHHHHHHHh-cCCCeEEEEeccccccCcc-H
Confidence 4567899999999999999998888876 4777766533 21111 111122222 356899999986 333 5
Q ss_pred HHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHH
Q 009196 257 ARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADI 336 (540)
Q Consensus 257 a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~l 336 (540)
.+.++.+. ++|+|+|.+|+|||. ++++.+++. ++|+.+++.. .+.+..+
T Consensus 86 ~~~~~~~~-~~g~d~V~~~~g~p~--------------------~~~~~l~~~-gi~vi~~v~t---------~~~a~~~ 134 (328)
T 2gjl_A 86 AEYRAAII-EAGIRVVETAGNDPG--------------------EHIAEFRRH-GVKVIHKCTA---------VRHALKA 134 (328)
T ss_dssp HHHHHHHH-HTTCCEEEEEESCCH--------------------HHHHHHHHT-TCEEEEEESS---------HHHHHHH
T ss_pred HHHHHHHH-hcCCCEEEEcCCCcH--------------------HHHHHHHHc-CCCEEeeCCC---------HHHHHHH
Confidence 55666665 679999999998871 344455443 7788876532 2456778
Q ss_pred HHcCCcEEEEecccccCccC---CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 337 GTWGASAVTVHGRTRQQRYS---KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 337 eeaGvdaItVHgRtr~q~y~---g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
.+.|+|+|.++|+... ++. ...+|+.+.++++.+ ++|||+.|||.+++++.+++. .|||+|++||+++..|.
T Consensus 135 ~~~GaD~i~v~g~~~G-G~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al~--~GAdgV~vGs~~~~~~e 209 (328)
T 2gjl_A 135 ERLGVDAVSIDGFECA-GHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGRGLVAALA--LGADAINMGTRFLATRE 209 (328)
T ss_dssp HHTTCSEEEEECTTCS-BCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHH--HTCSEEEESHHHHTSSS
T ss_pred HHcCCCEEEEECCCCC-cCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH--cCCCEEEECHHHHcCcc
Confidence 8999999999987542 222 236899999999887 799999999999999999887 58999999999999998
No 53
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.63 E-value=1.1e-14 Score=154.20 Aligned_cols=205 Identities=14% Similarity=0.084 Sum_probs=139.2
Q ss_pred CcccCCcEEEccCCCCCCHHHHHHHHHhC-CCEEEeccceechhccCChh--hh-----------------hhhh-----
Q 009196 182 LIDFREKLYLAPLTTVGNLPFRRVCKVLG-ADVTCGEMAMCTNLLQGQAS--EW-----------------ALLR----- 236 (540)
Q Consensus 182 ~l~lknrliLAPM~~vtdlpfR~l~~~~G-adl~~TEmi~a~~l~~g~~~--e~-----------------~ll~----- 236 (540)
++.++.|+++|||+++++..++..+.+.| .+++. -+...+.+...... .+ .++.
T Consensus 38 g~~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~-~~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 116 (404)
T 1eep_A 38 NISLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIH-KNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHL 116 (404)
T ss_dssp SCEESSSEEECCCTTTCSHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHTCC-------------------------
T ss_pred CcccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEEC-CCCCHHHHHHHHHHHHhhccCCCceeccccccccccccccCCCC
Confidence 68899999999999999999987766655 45554 33333322111000 00 0000
Q ss_pred -------------ccc-------CCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCc
Q 009196 237 -------------RHS-------SEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKP 296 (540)
Q Consensus 237 -------------~~~-------~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p 296 (540)
..+ ...++++.+... ++. .+.++.+. ++|+|+|+||+++ | ++
T Consensus 117 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~-~~~-~~~a~~~~-~~G~d~i~i~~~~----------g-----~~ 178 (404)
T 1eep_A 117 EKSDAYKNAEHKEDFPNACKDLNNKLRVGAAVSID-IDT-IERVEELV-KAHVDILVIDSAH----------G-----HS 178 (404)
T ss_dssp -------------CCTTCCBCTTSCBCCEEEECSC-TTH-HHHHHHHH-HTTCSEEEECCSC----------C-----SS
T ss_pred CHHHHHHHHHHhhhcchhhhhcccCceEEEEeCCC-hhH-HHHHHHHH-HCCCCEEEEeCCC----------C-----Ch
Confidence 001 011356676543 333 34444454 5799999999765 1 46
Q ss_pred hHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE------ecccccCccCCCcCHHHHHHHHH
Q 009196 297 MRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV------HGRTRQQRYSKLADWDYIYQCAR 369 (540)
Q Consensus 297 ~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV------HgRtr~q~y~g~adw~~I~~i~~ 369 (540)
+.+.++++.+++.+ ++||.++.-. ..+.++.+.++|+|+|++ |.+++.....+.+.++.+..+++
T Consensus 179 ~~~~e~i~~ir~~~~~~pviv~~v~--------~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~ 250 (404)
T 1eep_A 179 TRIIELIKKIKTKYPNLDLIAGNIV--------TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYE 250 (404)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEEC--------SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCeEEEcCCC--------cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHH
Confidence 88889999999988 8999984322 146788899999999999 32332222234456788888877
Q ss_pred HcC-CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 370 KAS-DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 370 ~~~-~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
.+. .++|||++|||.+++|+.+++. .|||+||+||+++..|+..
T Consensus 251 ~~~~~~ipVia~GGI~~~~d~~~ala--~GAd~V~iG~~~l~~~e~~ 295 (404)
T 1eep_A 251 ACNNTNICIIADGGIRFSGDVVKAIA--AGADSVMIGNLFAGTKESP 295 (404)
T ss_dssp HHTTSSCEEEEESCCCSHHHHHHHHH--HTCSEEEECHHHHTBTTSS
T ss_pred HHhhcCceEEEECCCCCHHHHHHHHH--cCCCHHhhCHHHhcCCCCC
Confidence 432 1699999999999999999998 6899999999999988764
No 54
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.54 E-value=8.7e-14 Score=136.62 Aligned_cols=157 Identities=12% Similarity=0.167 Sum_probs=118.1
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEE---
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIK--- 317 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVK--- 317 (540)
..|+.+-.+=.+++++. .+. .+|+|.|=| |+.++.+|+++.++++.....+.+.+.++
T Consensus 75 ~ipv~v~ggI~~~~~~~----~~l-~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~ 135 (244)
T 1vzw_A 75 DIKVELSGGIRDDDTLA----AAL-ATGCTRVNL--------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGTT 135 (244)
T ss_dssp SSEEEEESSCCSHHHHH----HHH-HTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETTE
T ss_pred CCcEEEECCcCCHHHHH----HHH-HcCCCEEEE--------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCCE
Confidence 55665544446676532 233 469999877 56778899999999988654433334433
Q ss_pred -ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcC
Q 009196 318 -VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDC 396 (540)
Q Consensus 318 -iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~ 396 (540)
.+.||.+...+..++++.+++.|++.|.+|++++.+.+.+ .+|+.++++++.+ ++|||++|||.+++++.++++.
T Consensus 136 v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~- 211 (244)
T 1vzw_A 136 LRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQG-PNLELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGL- 211 (244)
T ss_dssp ECCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------C-CCHHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTT-
T ss_pred EEEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCC-CCHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhh-
Confidence 2458876555778899999999999999999998877766 5999999999987 7999999999999999998863
Q ss_pred C--CcCeeeecHHHHhCCCchHHHHh
Q 009196 397 P--ELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 397 ~--gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+ |||+||+||+++.+||.|.++.+
T Consensus 212 ~~~Gadgv~vG~al~~~~~~~~~~~~ 237 (244)
T 1vzw_A 212 VPAGVEGAIVGKALYAKAFTLEEALE 237 (244)
T ss_dssp GGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred ccCCCceeeeeHHHHcCCCCHHHHHH
Confidence 4 99999999999999999998765
No 55
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.54 E-value=8.3e-14 Score=145.85 Aligned_cols=199 Identities=15% Similarity=0.126 Sum_probs=140.8
Q ss_pred CcccCCcEEEccCCCCCCHHHHH-HHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHH
Q 009196 182 LIDFREKLYLAPLTTVGNLPFRR-VCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTV 260 (540)
Q Consensus 182 ~l~lknrliLAPM~~vtdlpfR~-l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA 260 (540)
.+.|+-|++.|||+++++..+.. +++..|.+++...| ....+ ....+.++. ....|+++.+..+. .+.+
T Consensus 41 ~~~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~~-s~e~~----~~~I~~vk~-~~~~pvga~ig~~~----~e~a 110 (361)
T 3khj_A 41 NVSLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKNM-DMESQ----VNEVLKVKN-SGGLRVGAAIGVNE----IERA 110 (361)
T ss_dssp SCEESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSSS-CHHHH----HHHHHHHHH-TTCCCCEEEECTTC----HHHH
T ss_pred ccccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecCC-CHHHH----HHHHHHHHh-ccCceEEEEeCCCH----HHHH
Confidence 57888999999999999998886 56667777764321 11110 011111221 23468899987665 3444
Q ss_pred HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcC
Q 009196 261 ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWG 340 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaG 340 (540)
+.+. ++|+|.|.||.+. | +++.+.++++.+++.+++||.++.-. ..+.++.+.++|
T Consensus 111 ~~l~-eaGad~I~ld~a~----------G-----~~~~~~~~i~~i~~~~~~~Vivg~v~--------t~e~A~~l~~aG 166 (361)
T 3khj_A 111 KLLV-EAGVDVIVLDSAH----------G-----HSLNIIRTLKEIKSKMNIDVIVGNVV--------TEEATKELIENG 166 (361)
T ss_dssp HHHH-HTTCSEEEECCSC----------C-----SBHHHHHHHHHHHHHCCCEEEEEEEC--------SHHHHHHHHHTT
T ss_pred HHHH-HcCcCeEEEeCCC----------C-----CcHHHHHHHHHHHHhcCCcEEEccCC--------CHHHHHHHHHcC
Confidence 4454 5799999999653 1 46777888998888778999985432 235688899999
Q ss_pred CcEEEEec------ccccCccCCCcCHHHHHHHHH---HcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 341 ASAVTVHG------RTRQQRYSKLADWDYIYQCAR---KASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 341 vdaItVHg------Rtr~q~y~g~adw~~I~~i~~---~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
+|+|.+.. .++.....+.+.+..+.++++ .+ ++|||+.|||.+++|+.+++. .|||+||+|++++.-
T Consensus 167 aD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~--~iPVIA~GGI~~~~di~kala--~GAd~V~vGs~~~~t 242 (361)
T 3khj_A 167 ADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIADGGIRYSGDIGKALA--VGASSVMIGSILAGT 242 (361)
T ss_dssp CSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHH--TCCEEEESCCCSHHHHHHHHH--HTCSEEEESTTTTTB
T ss_pred cCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhc--CCeEEEECCCCCHHHHHHHHH--cCCCEEEEChhhhcC
Confidence 99999932 222222234567777777754 35 699999999999999999998 699999999999998
Q ss_pred CCchHHH
Q 009196 412 PWIFTEI 418 (540)
Q Consensus 412 Pwif~ei 418 (540)
+....++
T Consensus 243 ~Esp~~~ 249 (361)
T 3khj_A 243 EESPGEK 249 (361)
T ss_dssp TTSSCEE
T ss_pred CcCCcch
Confidence 8765544
No 56
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.53 E-value=1.2e-13 Score=135.63 Aligned_cols=187 Identities=16% Similarity=0.165 Sum_probs=132.9
Q ss_pred HHHHhCCC-EEEeccceechhccCChhhhhhhhcccCCCeEEEEecCC--cHHHHHHHHHHHHHhCCCCEEEecCCCCCc
Q 009196 205 VCKVLGAD-VTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGA--YPDTLARTVELIDQQCTVDFIDINMGCPID 281 (540)
Q Consensus 205 l~~~~Gad-l~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~--~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~ 281 (540)
...+.|++ +.++++..... +....+..++.-. ...+-+++.|. +++++.+ .+ ++|+|+|=|
T Consensus 38 ~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~---~~--~~Gad~V~l------- 101 (241)
T 1qo2_A 38 KLIEEGFTLIHVVDLSNAIE---NSGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEK---LR--KLGYRRQIV------- 101 (241)
T ss_dssp HHHHTTCCCEEEEEHHHHHH---CCCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHH---HH--HTTCCEEEE-------
T ss_pred HHHHcCCCEEEEeccccccc---CCchhHHHHHHHH-hcCCcEEEECCCCCHHHHHH---HH--HCCCCEEEE-------
Confidence 33457986 56776543322 1112233332211 22233566654 4443333 22 368998855
Q ss_pred ccccCCccccccCCchHHHHHHHHhcccc--cccE---EEEecCCCCCChh-HHHHHHHHHHHcCCcEEEEecccccCcc
Q 009196 282 IVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPI---TIKVRTGYFEGKN-RIDSLIADIGTWGASAVTVHGRTRQQRY 355 (540)
Q Consensus 282 ~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPV---tVKiR~G~~e~~~-~~~~la~~leeaGvdaItVHgRtr~q~y 355 (540)
|++++.+|+.+.++ +.....+ ++.+ .|++ .||.+... ...++++.+++.|++.|.+|++++.+.+
T Consensus 102 -------g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~~-~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~ 172 (241)
T 1qo2_A 102 -------SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVAF-KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTL 172 (241)
T ss_dssp -------CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEECC-TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHT
T ss_pred -------CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEEE-CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccC
Confidence 77888999999998 7764332 3333 5555 47865432 6788999999999999999999988877
Q ss_pred CCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC----C-cCeeeecHHHHhCCCchHHHHh
Q 009196 356 SKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP----E-LASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 356 ~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~----g-aDgVMIGRgaL~nPwif~eik~ 420 (540)
.+ .+|+.++++++.+ ++|||++|||.+++|+.++++. + | ||+|||||+++..+.-+.++++
T Consensus 173 ~g-~~~~~i~~l~~~~--~iPvia~GGI~~~~d~~~~~~~-~~~~~G~adgv~vgsal~~~~~~~~~~~~ 238 (241)
T 1qo2_A 173 QE-HDFSLTKKIAIEA--EVKVLAAGGISSENSLKTAQKV-HTETNGLLKGVIVGRAFLEGILTVEVMKR 238 (241)
T ss_dssp CC-CCHHHHHHHHHHH--TCEEEEESSCCSHHHHHHHHHH-HHHTTTSEEEEEECHHHHTTSSCHHHHHH
T ss_pred Cc-CCHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHhc-ccccCCeEeEEEeeHHHHcCCCCHHHHHH
Confidence 77 4999999999998 7999999999999999998863 4 9 9999999999999998888764
No 57
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.52 E-value=5.7e-14 Score=146.92 Aligned_cols=195 Identities=12% Similarity=0.092 Sum_probs=134.7
Q ss_pred ccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHH
Q 009196 180 KKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLART 259 (540)
Q Consensus 180 ~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~A 259 (540)
+.++.++.|+++|||.++++..+...+.+.|.-.+++.+...+.+.. .++. ....+++.+ | .++...+.
T Consensus 36 l~g~~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~-------~i~~--~~~~~~~~~-g-~~~~~~e~ 104 (361)
T 3r2g_A 36 LGKLTLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQ-------EFKK--CKGPVFVSV-G-CTENELQR 104 (361)
T ss_dssp TSSCEESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHH-------HHHT--CCSCCBEEE-C-SSHHHHHH
T ss_pred ECCEEcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHH-------HHhh--cceEEEEEc-C-CCHHHHHH
Confidence 36788999999999999999999999988875444444322222111 1111 111222222 2 23445566
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~lee 338 (540)
++.+. ++|+|.|.|+..+.. +..+.++|+.+++.+ ++||.+|.-. ..+.|+.+.+
T Consensus 105 ~~~a~-~aGvdvI~id~a~G~---------------~~~~~e~I~~ir~~~~~~~Vi~G~V~--------T~e~A~~a~~ 160 (361)
T 3r2g_A 105 AEALR-DAGADFFCVDVAHAH---------------AKYVGKTLKSLRQLLGSRCIMAGNVA--------TYAGADYLAS 160 (361)
T ss_dssp HHHHH-HTTCCEEEEECSCCS---------------SHHHHHHHHHHHHHHTTCEEEEEEEC--------SHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEEeCCCCC---------------cHhHHHHHHHHHHhcCCCeEEEcCcC--------CHHHHHHHHH
Confidence 67776 689999999865532 245678899998876 7899997322 1355888999
Q ss_pred cCCcEEEE--ec-cc---ccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 339 WGASAVTV--HG-RT---RQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 339 aGvdaItV--Hg-Rt---r~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
+|+|+|.| |+ +. +.....+.+.+..|.++++.+ . |||+.|||.+..|+.++|. .|||+|||||.++.-.
T Consensus 161 aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~--~-PVIAdGGI~~~~di~kALa--~GAd~V~iGr~f~~t~ 235 (361)
T 3r2g_A 161 CGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRAD--R-SIVADGGIKTSGDIVKALA--FGADFVMIGGMLAGSA 235 (361)
T ss_dssp TTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSS--S-EEEEESCCCSHHHHHHHHH--TTCSEEEESGGGTTBT
T ss_pred cCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhC--C-CEEEECCCCCHHHHHHHHH--cCCCEEEEChHHhCCc
Confidence 99999998 32 11 111122344677777777655 3 9999999999999999998 6999999999999876
Q ss_pred Cc
Q 009196 413 WI 414 (540)
Q Consensus 413 wi 414 (540)
..
T Consensus 236 Es 237 (361)
T 3r2g_A 236 PT 237 (361)
T ss_dssp TS
T ss_pred cC
Confidence 53
No 58
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=2.5e-14 Score=146.81 Aligned_cols=146 Identities=13% Similarity=0.206 Sum_probs=112.9
Q ss_pred HHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCC------------
Q 009196 257 ARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFE------------ 324 (540)
Q Consensus 257 a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e------------ 324 (540)
++.|+.++ ++|+++|... ||++...+.+.|+++|++|+.+.+|.+ ++++||+.|.|+||.+
T Consensus 27 ~e~A~~ae-~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~~----av~iPV~~K~rig~~~e~qilea~GaD~ 99 (330)
T 2yzr_A 27 VEQAQIAE-EAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIMD----AVSIPVMAKCRIGHTTEALVLEAIGVDM 99 (330)
T ss_dssp HHHHHHHH-HHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHHH----HCSSCEEEEEETTCHHHHHHHHHTTCSE
T ss_pred HHHHHHHH-HcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHHH----hcCCCeEEEEeecchHHHHHHHHcCCCE
Confidence 34566555 6799999443 399999999999999999999998875 4589999999999831
Q ss_pred -------------Ch--------------hHHHHHHHHHHHcCCcEEEEec--------------cc------------c
Q 009196 325 -------------GK--------------NRIDSLIADIGTWGASAVTVHG--------------RT------------R 351 (540)
Q Consensus 325 -------------~~--------------~~~~~la~~leeaGvdaItVHg--------------Rt------------r 351 (540)
.+ .++-+.++++ +.|+++|++|| |+ .
T Consensus 100 Id~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~ 178 (330)
T 2yzr_A 100 IDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTD 178 (330)
T ss_dssp EEEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCH
T ss_pred EehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCH
Confidence 00 1366777887 89999999999 65 3
Q ss_pred cCccC----CCcCH-------------------------------------HHHHHHHHHcCCCceE--EEeCCCCCHHH
Q 009196 352 QQRYS----KLADW-------------------------------------DYIYQCARKASDDLQV--LGNGDIYSYLD 388 (540)
Q Consensus 352 ~q~y~----g~adw-------------------------------------~~I~~i~~~~~~~IPV--IgNGdI~s~eD 388 (540)
.+.|. ..++| +.++++++.. ++|| |++|||.|++|
T Consensus 179 ~El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~--~IPVV~VAeGGI~Tped 256 (330)
T 2yzr_A 179 EEVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLG--RLPVVNFAAGGVATPAD 256 (330)
T ss_dssp HHHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHT--SCSSEEEECSCCCSHHH
T ss_pred HHHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhC--CCCeEEEEECCCCCHHH
Confidence 34432 13556 8889998877 6898 69999999999
Q ss_pred HHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 389 WNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 389 a~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
+..+++ .|||+|||||+++.-+..
T Consensus 257 a~~~l~--~GaDgV~VGsaI~~a~dP 280 (330)
T 2yzr_A 257 AALMMQ--LGSDGVFVGSGIFKSENP 280 (330)
T ss_dssp HHHHHH--TTCSCEEESHHHHTSSCH
T ss_pred HHHHHH--cCcCEEeeHHHHhcCCCH
Confidence 999887 699999999999954443
No 59
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.50 E-value=2e-14 Score=141.91 Aligned_cols=153 Identities=13% Similarity=0.123 Sum_probs=31.0
Q ss_pred CCeEEEEecC--CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhc-ccc----ccc
Q 009196 241 EDLFGVQICG--AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATS-GTV----DKP 313 (540)
Q Consensus 241 e~p~~vQL~G--~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~-~~v----~iP 313 (540)
..|+++ .| .+++++.++ + .+|+|+|=| |++++.+|+++.++.+.+- +.+ +.+
T Consensus 79 ~ipvi~--~Ggi~~~~~~~~~---l--~~Gad~V~i--------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~ 137 (247)
T 3tdn_A 79 TLPIIA--SGGAGKMEHFLEA---F--LRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAK 137 (247)
T ss_dssp CSCEEE--ESCCCSHHHHHHH---H--HTTCSEECC--------------SHHHHHCTHHHHHHHHHHC-----------
T ss_pred CCCEEE--eCCCCCHHHHHHH---H--HcCCCeeeh--------------hhHHhhChHHHHHHHHHhCCCcEEEEEEec
Confidence 445543 44 456554333 2 358999865 7888899999999988772 322 333
Q ss_pred -----EEEEecCCCCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHH
Q 009196 314 -----ITIKVRTGYFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYL 387 (540)
Q Consensus 314 -----VtVKiR~G~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~e 387 (540)
..|+++ ||.+. ..+..++++.++++|++.|.+|++++.+.+.+ .+|+.++++++.+ ++|||++|||.|++
T Consensus 138 ~~~~~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~--~iPvia~GGI~~~~ 213 (247)
T 3tdn_A 138 RVDGEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKME 213 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhC--CCCEEEECCCCCHH
Confidence 356665 77653 24677899999999999999999988877766 6899999999988 79999999999999
Q ss_pred HHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 388 DWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 388 Da~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
|+.++++ .|||+|||||+++.+||+|.++++
T Consensus 214 d~~~~~~--~Gad~v~vg~al~~~p~~~~~~~~ 244 (247)
T 3tdn_A 214 HFLEAFL--RGADKVSINTAAVENPSLITQIAQ 244 (247)
T ss_dssp ---------------------------------
T ss_pred HHHHHHH--cCCcHhhccHHHHcCcHHHHHHHH
Confidence 9999876 589999999999999999999875
No 60
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.50 E-value=5.3e-13 Score=129.93 Aligned_cols=192 Identities=12% Similarity=0.102 Sum_probs=135.7
Q ss_pred HHHHHHHhCCC-EEEeccceechhccCChhhhhhhhc--ccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCC
Q 009196 202 FRRVCKVLGAD-VTCGEMAMCTNLLQGQASEWALLRR--HSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGC 278 (540)
Q Consensus 202 fR~l~~~~Gad-l~~TEmi~a~~l~~g~~~e~~ll~~--~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GC 278 (540)
+-+.+.+.|++ +.+++|..... +....+.+++. .....|+.+--.-.+++++.+ +. .+|+|+|.|+
T Consensus 38 ~a~~~~~~G~d~i~v~~~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~----~~-~~Gad~V~i~--- 106 (253)
T 1h5y_A 38 MAVRYEEEGADEIAILDITAAPE---GRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATT----LF-RAGADKVSVN--- 106 (253)
T ss_dssp HHHHHHHTTCSCEEEEECCCCTT---THHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHH----HH-HHTCSEEEES---
T ss_pred HHHHHHHcCCCEEEEEeCCcccc---CCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHH----HH-HcCCCEEEEC---
Confidence 33445567998 66777654321 11112222211 122456665444456665433 22 3599999996
Q ss_pred CCcccccCCccccccCCchHHHHHHHHhcc-----cccc-----cEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEec
Q 009196 279 PIDIVVNKGAGSCLLTKPMRMKGIIEATSG-----TVDK-----PITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHG 348 (540)
Q Consensus 279 P~~~v~~~G~GsaLl~~p~~l~eIv~av~~-----~v~i-----PVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHg 348 (540)
..++.+|+.+.++++.... .++. ++.|++|.++.+...+..++++.+.++|++.|.+|+
T Consensus 107 -----------~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~ 175 (253)
T 1h5y_A 107 -----------TAAVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTS 175 (253)
T ss_dssp -----------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEE
T ss_pred -----------hHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEec
Confidence 3466788888888877532 1133 268889987644444677889999999999999999
Q ss_pred ccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 349 RTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 349 Rtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+++.+...+ .+|++++++++.+ ++||+++|||.+++++.++++ .|||+||+||+++.+++-+.++++
T Consensus 176 ~~~~g~~~~-~~~~~i~~l~~~~--~~pvia~GGi~~~~~~~~~~~--~Ga~~v~vgsal~~~~~~~~~~~~ 242 (253)
T 1h5y_A 176 IDRDGTGLG-YDVELIRRVADSV--RIPVIASGGAGRVEHFYEAAA--AGADAVLAASLFHFRVLSIAQVKR 242 (253)
T ss_dssp TTTTTTCSC-CCHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHH--TTCSEEEESHHHHTTSSCHHHHHH
T ss_pred ccCCCCcCc-CCHHHHHHHHHhc--CCCEEEeCCCCCHHHHHHHHH--cCCcHHHHHHHHHcCCCCHHHHHH
Confidence 987666555 4899999999987 799999999999999999885 799999999999998877666543
No 61
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.45 E-value=2.5e-12 Score=126.51 Aligned_cols=189 Identities=13% Similarity=0.101 Sum_probs=132.3
Q ss_pred HHHHHhCCCE-EEeccceechhccCChhhhhhhhc--ccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCC
Q 009196 204 RVCKVLGADV-TCGEMAMCTNLLQGQASEWALLRR--HSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPI 280 (540)
Q Consensus 204 ~l~~~~Gadl-~~TEmi~a~~l~~g~~~e~~ll~~--~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~ 280 (540)
+...+.|++. .++++..... +....+..++. .....|+.+--+=.+++++.++ . .+|+|+|=|
T Consensus 37 ~~~~~~Gad~i~v~d~~~~~~---~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~----~-~~Gad~V~l------ 102 (253)
T 1thf_D 37 KFYSEIGIDELVFLDITASVE---KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASEL----I-LRGADKVSI------ 102 (253)
T ss_dssp HHHHHTTCCEEEEEESSCSSS---HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHH----H-HTTCSEEEE------
T ss_pred HHHHHcCCCEEEEECCchhhc---CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHH----H-HcCCCEEEE------
Confidence 3344579874 5666543211 11122222221 1234555543333456553332 2 369999966
Q ss_pred cccccCCccccccCCchHHHHHHHHhcc-c--c--ccc-----EEEEecCCCCCCh-hHHHHHHHHHHHcCCcEEEEecc
Q 009196 281 DIVVNKGAGSCLLTKPMRMKGIIEATSG-T--V--DKP-----ITIKVRTGYFEGK-NRIDSLIADIGTWGASAVTVHGR 349 (540)
Q Consensus 281 ~~v~~~G~GsaLl~~p~~l~eIv~av~~-~--v--~iP-----VtVKiR~G~~e~~-~~~~~la~~leeaGvdaItVHgR 349 (540)
|++++.+|+.+.++++.+.. . + +.+ +.|+++ ||.+.. .+..++++.+++.|++.|.+|++
T Consensus 103 --------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~ 173 (253)
T 1thf_D 103 --------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSI 173 (253)
T ss_dssp --------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEET
T ss_pred --------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEEC-CCccccCCCHHHHHHHHHHCCCCEEEEEec
Confidence 67788899999999888742 2 2 222 255553 665422 35678899999999999999999
Q ss_pred cccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 350 TRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 350 tr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
++.+.+.++ +|+.++++++.+ ++|||++|||.+++|+.++++ +|||+||+||+++.+||.+.++++
T Consensus 174 ~~~g~~~g~-~~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~--~Gadgv~vGsal~~~~~~~~~~~~ 239 (253)
T 1thf_D 174 DRDGTKSGY-DTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFL--AGADAALAASVFHFREIDVRELKE 239 (253)
T ss_dssp TTTTSCSCC-CHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHH--TTCSEEEESHHHHTTCSCHHHHHH
T ss_pred cCCCCCCCC-CHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH--cCChHHHHHHHHHcCCCCHHHHHH
Confidence 888887774 999999999887 799999999999999999875 899999999999999998887654
No 62
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=1.7e-12 Score=136.82 Aligned_cols=208 Identities=13% Similarity=0.090 Sum_probs=136.3
Q ss_pred ccCcccCCcEEEccCCCCCCHHHHHHHHHhC-CCEEEeccceech---------hc---c-----------------C-C
Q 009196 180 KKLIDFREKLYLAPLTTVGNLPFRRVCKVLG-ADVTCGEMAMCTN---------LL---Q-----------------G-Q 228 (540)
Q Consensus 180 ~~~l~lknrliLAPM~~vtdlpfR~l~~~~G-adl~~TEmi~a~~---------l~---~-----------------g-~ 228 (540)
+.++.|+.|+++|||+++++..+.+.+.+.| .+++.|||+.... +. . . .
T Consensus 61 l~g~~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d 140 (393)
T 2qr6_A 61 IDAYKFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLD 140 (393)
T ss_dssp ETTEEESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred EcccccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCC
Confidence 4578899999999999999999877777765 6888887732210 00 0 0 0
Q ss_pred hhh-hhhhh-cccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCch-HHHHHHHH
Q 009196 229 ASE-WALLR-RHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPM-RMKGIIEA 305 (540)
Q Consensus 229 ~~e-~~ll~-~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~-~l~eIv~a 305 (540)
... ..+++ ..+.+.++++.+.+....+++ +.+. ++|+|+|.+| +.|.. .++++ +. ...+ +..
T Consensus 141 ~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a---~~~~-~agad~i~i~-~~~~~----~~~~~-----~~~~~~~-i~~ 205 (393)
T 2qr6_A 141 TELLSERIAQVRDSGEIVAVRVSPQNVREIA---PIVI-KAGADLLVIQ-GTLIS----AEHVN-----TGGEALN-LKE 205 (393)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEECTTTHHHHH---HHHH-HTTCSEEEEE-CSSCC----SSCCC-----C-----C-HHH
T ss_pred HHHHHHHHHHHhhcCCeEEEEeCCccHHHHH---HHHH-HCCCCEEEEe-CCccc----cccCC-----CcccHHH-HHH
Confidence 000 01111 112356778888776554443 3444 4799999988 44421 12221 11 1112 445
Q ss_pred hcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecc----cccCccCCCcCHHHHHHHHHH-------cCCC
Q 009196 306 TSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGR----TRQQRYSKLADWDYIYQCARK-------ASDD 374 (540)
Q Consensus 306 v~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgR----tr~q~y~g~adw~~I~~i~~~-------~~~~ 374 (540)
+++.+++||.+|--.. .+.++.+.++|+|+|.| ++ ++.....+.+.++.+.++++. +..+
T Consensus 206 l~~~~~~pvi~ggi~t--------~e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~ 276 (393)
T 2qr6_A 206 FIGSLDVPVIAGGVND--------YTTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGR 276 (393)
T ss_dssp HHHHCSSCEEEECCCS--------HHHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHhcCCCEEECCcCC--------HHHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCc
Confidence 5566789999964321 23477888999999999 44 111122356778888888776 5322
Q ss_pred -ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 375 -LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 375 -IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
+|||++|||.+..|+.+++. .|||+|||||+++..+.
T Consensus 277 ~ipvia~GGI~~~~dv~kala--lGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 277 YVHIIADGSIENSGDVVKAIA--CGADAVVLGSPLARAEE 314 (393)
T ss_dssp CCEEEECSSCCSHHHHHHHHH--HTCSEEEECGGGGGSTT
T ss_pred ceEEEEECCCCCHHHHHHHHH--cCCCEEEECHHHHcCCC
Confidence 99999999999999999998 68999999999998885
No 63
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.41 E-value=1.6e-12 Score=127.89 Aligned_cols=155 Identities=10% Similarity=0.030 Sum_probs=119.7
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcc-c--ccccE---
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSG-T--VDKPI--- 314 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~-~--v~iPV--- 314 (540)
..|+++-=.=++++++.++. .+|+|+|=| |.+++.+|+.+.++++.... . +.+++
T Consensus 75 ~iPvi~~Ggi~~~~~~~~~~-----~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~ 135 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDARKLL-----LSGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWR 135 (252)
T ss_dssp CSCEEEESSCCSHHHHHHHH-----HHTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEE
T ss_pred CCCEEEECCcCCHHHHHHHH-----HcCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecC
Confidence 45655432224455443332 248999977 67888899999999888742 1 23322
Q ss_pred ----EEEecCCCCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHH
Q 009196 315 ----TIKVRTGYFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDW 389 (540)
Q Consensus 315 ----tVKiR~G~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa 389 (540)
.|++ .||.+. .....++++.+++.|++.|.+|++++.+.+.++ +|+.++++++.+ ++|||++|||.+++|+
T Consensus 136 ~g~~~v~~-~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~--~ipvia~GGI~~~~d~ 211 (252)
T 1ka9_F 136 GDFPEVHV-AGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAV--GVPVIASGGAGRMEHF 211 (252)
T ss_dssp TTEEEEEE-TTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHC--SSCEEEESCCCSHHHH
T ss_pred CCCEEEEE-CCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHc--CCCEEEeCCCCCHHHH
Confidence 4555 467542 235678899999999999999998888887774 899999999998 7999999999999999
Q ss_pred HHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 390 NKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 390 ~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
.+++. +|||+||+||+++..||.+.++++
T Consensus 212 ~~~~~--~Gadgv~vgsal~~~~~~~~~~~~ 240 (252)
T 1ka9_F 212 LEAFQ--AGAEAALAASVFHFGEIPIPKLKR 240 (252)
T ss_dssp HHHHH--TTCSEEEESHHHHTTSSCHHHHHH
T ss_pred HHHHH--CCCHHHHHHHHHHcCCCCHHHHHH
Confidence 99775 899999999999999999998765
No 64
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.39 E-value=3.3e-12 Score=126.74 Aligned_cols=190 Identities=11% Similarity=0.022 Sum_probs=117.5
Q ss_pred HHHHHhCCCEE-EeccceechhccCC-hhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc
Q 009196 204 RVCKVLGADVT-CGEMAMCTNLLQGQ-ASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPID 281 (540)
Q Consensus 204 ~l~~~~Gadl~-~TEmi~a~~l~~g~-~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~ 281 (540)
+.+.+.|++.+ ++++..... ..+. ......++. ....|+++-=+-++++++.++. .+|+|+|=|
T Consensus 37 ~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~-~~~iPvi~~ggi~~~~~i~~~~-----~~Gad~v~l------- 102 (266)
T 2w6r_A 37 VEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRP-LTTLPIIASGGAGKMEHFLEAF-----LAGADKALA------- 102 (266)
T ss_dssp HHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGG-GCCSCEEEESCCCSTHHHHHHH-----HHTCSEEEC-------
T ss_pred HHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHH-hcCCCEEEECCCCCHHHHHHHH-----HcCCcHhhh-------
Confidence 34456799754 565432211 1111 111122222 2345665532224556654433 248998877
Q ss_pred ccccCCcccccc-C--CchHHHHHHHHhc---cc--ccccE-------EEEecCCCCCCh-hHHHHHHHHHHHcCCcEEE
Q 009196 282 IVVNKGAGSCLL-T--KPMRMKGIIEATS---GT--VDKPI-------TIKVRTGYFEGK-NRIDSLIADIGTWGASAVT 345 (540)
Q Consensus 282 ~v~~~G~GsaLl-~--~p~~l~eIv~av~---~~--v~iPV-------tVKiR~G~~e~~-~~~~~la~~leeaGvdaIt 345 (540)
|++++ . +|+.+.++++... +. +.+++ .|+++ ||.+.. ....++++.+++.|++.|.
T Consensus 103 -------g~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~ 174 (266)
T 2w6r_A 103 -------ASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEIL 174 (266)
T ss_dssp -------CCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEE
T ss_pred -------hHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEE
Confidence 45555 4 7888888776654 22 23333 56664 664322 2467889999999999999
Q ss_pred EecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 346 VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 346 VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+|++++.+.+.+ .+|+.++++++.+ ++|||++|||.+++|+.+++. .|||+||||++++.+||.+.++++
T Consensus 175 ~t~~~~~g~~~g-~~~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~--~Gadgv~vgsal~~~~~~~~~~~~ 244 (266)
T 2w6r_A 175 LTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFL--AGADAALAASVFHFREIDMRELKE 244 (266)
T ss_dssp EEETTTTTTCSC-CCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHH--HTCSEEEESTTTC-----------
T ss_pred EEeecCCCCcCC-CCHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHH--cCCHHHHccHHHHcCCCCHHHHHH
Confidence 999988888777 4899999999988 799999999999999999875 799999999999999999988865
No 65
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.35 E-value=3.9e-12 Score=133.37 Aligned_cols=201 Identities=18% Similarity=0.087 Sum_probs=130.5
Q ss_pred CcccCCcEEEccCCCCCCHHHH-HHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec-CCcHHHHHHH
Q 009196 182 LIDFREKLYLAPLTTVGNLPFR-RVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC-GAYPDTLART 259 (540)
Q Consensus 182 ~l~lknrliLAPM~~vtdlpfR-~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~-G~~p~~~a~A 259 (540)
.+.++-|++.|||.++++..+. .+++..|.+++-..| ..+. ...+.+.++.. .++.+.+. |..++ +.+.
T Consensus 42 ~~~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~-s~e~----~~~~i~~vk~~---~~l~vga~vg~~~~-~~~~ 112 (366)
T 4fo4_A 42 NIALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNM-SIEQ----QAAQVHQVKIS---GGLRVGAAVGAAPG-NEER 112 (366)
T ss_dssp TEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSS-CHHH----HHHHHHHHHTT---TSCCCEEECCSCTT-CHHH
T ss_pred ccccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCC-CHHH----HHHHHHHHHhc---CceeEEEEeccChh-HHHH
Confidence 5778889999999999998777 445545656553211 0000 01111222221 23333433 22332 3344
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~lee 338 (540)
++.+. ++|+|.|.||... | +++.+.+.++.+++.. ++||.+..-. ..+.++.+.+
T Consensus 113 ~~~li-eaGvd~I~idta~----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v~--------t~e~A~~a~~ 168 (366)
T 4fo4_A 113 VKALV-EAGVDVLLIDSSH----------G-----HSEGVLQRIRETRAAYPHLEIIGGNVA--------TAEGARALIE 168 (366)
T ss_dssp HHHHH-HTTCSEEEEECSC----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEEC--------SHHHHHHHHH
T ss_pred HHHHH-hCCCCEEEEeCCC----------C-----CCHHHHHHHHHHHHhcCCCceEeeeeC--------CHHHHHHHHH
Confidence 55555 5799999998531 1 3567778888888877 7888774222 2356788899
Q ss_pred cCCcEEEEe------cccccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 339 WGASAVTVH------GRTRQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 339 aGvdaItVH------gRtr~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
+|+|+|.+. ..++.....+.+.+..+.++++.+. .++|||+.|||.++.|+.+++. .|||+||+|+.++.-
T Consensus 169 aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala--~GAd~V~vGs~f~~t 246 (366)
T 4fo4_A 169 AGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIA--AGASCVMVGSMFAGT 246 (366)
T ss_dssp HTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH--TTCSEEEESTTTTTB
T ss_pred cCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHH--cCCCEEEEChHhhcC
Confidence 999999992 1222222234567788888876321 1699999999999999999998 699999999999987
Q ss_pred CCchHH
Q 009196 412 PWIFTE 417 (540)
Q Consensus 412 Pwif~e 417 (540)
+.-..+
T Consensus 247 ~Esp~~ 252 (366)
T 4fo4_A 247 EEAPGE 252 (366)
T ss_dssp TTSSSC
T ss_pred CCCCch
Confidence 654433
No 66
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.33 E-value=8.7e-12 Score=124.44 Aligned_cols=200 Identities=13% Similarity=0.093 Sum_probs=134.1
Q ss_pred ccCCcEEEccCCCCCCHHHHHHH---HHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcH-------
Q 009196 184 DFREKLYLAPLTTVGNLPFRRVC---KVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYP------- 253 (540)
Q Consensus 184 ~lknrliLAPM~~vtdlpfR~l~---~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p------- 253 (540)
-+.++++++||.+..+.. .+| .++|++.+++..- ++.... +......|+++|+.+..+
T Consensus 31 ~id~~~~l~p~~~~~~~~--~~~~~~~~~g~~~i~~~~~----~~~~~~------~~~~~~~~~~v~~~~~~~~~~d~~~ 98 (273)
T 2qjg_A 31 PMDHGVSNGPIKGLIDIR--KTVNDVAEGGANAVLLHKG----IVRHGH------RGYGKDVGLIIHLSGGTAISPNPLK 98 (273)
T ss_dssp ECCHHHHHCSCTTSSSHH--HHHHHHHHHTCSEEEECHH----HHHSCC------CSSSCCCEEEEECEECCTTSSSTTC
T ss_pred EcccccccCCCcchhhHH--HHHHHHHhcCCCEEEeCHH----HHHHHH------HhhcCCCCEEEEEcCCCcCCCCccc
Confidence 356677899999998874 455 4689998876431 111110 111235688999986551
Q ss_pred HHHHHHHHHHHHhCCCCEE--EecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC-CCC----CCh
Q 009196 254 DTLARTVELIDQQCTVDFI--DINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT-GYF----EGK 326 (540)
Q Consensus 254 ~~~a~AA~~~~~~aG~D~I--DIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~-G~~----e~~ 326 (540)
+.+...++.+. .+|+|.| .+|.||+.. ..+ .+.+.++++.+++ .++|+.+.+-. |+. -+.
T Consensus 99 ~~~~~~v~~a~-~~Ga~~v~~~l~~~~~~~--------~~~---~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~~~ 165 (273)
T 2qjg_A 99 KVIVTTVEEAI-RMGADAVSIHVNVGSDED--------WEA---YRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNERDP 165 (273)
T ss_dssp CEECSCHHHHH-HTTCSEEEEEEEETSTTH--------HHH---HHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTTCH
T ss_pred chHHHHHHHHH-HcCCCEEEEEEecCCCCH--------HHH---HHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCCCH
Confidence 11234444454 5799999 888888721 111 1344455555543 47888887521 221 123
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCC--HHHHHHHHh---cCCCcCe
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYS--YLDWNKHKS---DCPELAS 401 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s--~eDa~~~l~---~~~gaDg 401 (540)
....++++.+.++|+|+|.++. +.+|+.++++++.+ ++||++.|||.+ .+|+.+++. . .||++
T Consensus 166 ~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~~~~-~Ga~g 233 (273)
T 2qjg_A 166 ELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAME-AGAAG 233 (273)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHHH-HTCSE
T ss_pred hHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHHH-cCCcE
Confidence 4556667889999999999973 36899999999988 699999999994 888555442 3 79999
Q ss_pred eeecHHHHhCCCchHHHHh
Q 009196 402 CMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 402 VMIGRgaL~nPwif~eik~ 420 (540)
|++||+++..||.+..+++
T Consensus 234 v~vg~~i~~~~~~~~~~~~ 252 (273)
T 2qjg_A 234 VAVGRNIFQHDDVVGITRA 252 (273)
T ss_dssp EECCHHHHTSSSHHHHHHH
T ss_pred EEeeHHhhCCCCHHHHHHH
Confidence 9999999999998766543
No 67
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.32 E-value=8.4e-12 Score=125.12 Aligned_cols=140 Identities=17% Similarity=0.189 Sum_probs=103.9
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHH
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~le 337 (540)
+.|++++ ++|+..|-...+||.+.. ..| |.+=|.+|+.+.+| ++++++||.-|.|.|. ..=++.|+
T Consensus 22 eqa~iae-~aGa~av~~l~~~p~d~r-~~g-Gv~Rm~dp~~I~~I----~~aVsIPVm~k~righ-------~~EAqile 87 (291)
T 3o07_A 22 EQAKIAE-KSGACAVMALESIPADMR-KSG-KVCRMSDPKMIKDI----MNSVSIPVMAKVRIGH-------FVEAQIIE 87 (291)
T ss_dssp HHHHHHH-HHTCSEEEECSSCHHHHH-TTT-CCCCCCCHHHHHHH----HTTCSSCEEEEEETTC-------HHHHHHHH
T ss_pred HHHHHHH-HhCchhhhhccCCCchhh-hcC-CccccCCHHHHHHH----HHhCCCCeEEEEecCc-------HHHHHHHH
Confidence 3455555 689999999999999854 333 77888999876554 5677999999999985 22356667
Q ss_pred HcCCcEEEEec-----------------------------------------ccc------------------------c
Q 009196 338 TWGASAVTVHG-----------------------------------------RTR------------------------Q 352 (540)
Q Consensus 338 eaGvdaItVHg-----------------------------------------Rtr------------------------~ 352 (540)
++|+|.|--+. ||. -
T Consensus 88 a~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l 167 (291)
T 3o07_A 88 ALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKAC 167 (291)
T ss_dssp HTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHH
T ss_pred HcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 77777764221 111 0
Q ss_pred Ccc-C----------CCcCHHHHHHHHHHcCCCceE--EEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 353 QRY-S----------KLADWDYIYQCARKASDDLQV--LGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 353 q~y-~----------g~adw~~I~~i~~~~~~~IPV--IgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
+.| + -.++|+.++++++.. ++|| |+||||.|++|+.++++ .|||+||||||++..|...
T Consensus 168 ~g~~t~~el~~~a~~~~ad~elI~~Ike~~--~IPVV~IAnGGI~TpedA~~~le--~GaDGVmVGrAI~~s~DP~ 239 (291)
T 3o07_A 168 QQLKSEDDIAKVAEEMRVPVSLLKDVLEKG--KLPVVNFAAGGVATPADAALLMQ--LGCDGVFVGSGIFKSSNPV 239 (291)
T ss_dssp HTCCCHHHHHHHHHHHTSCHHHHHHHHHHT--SCSSCEEBCSSCCSHHHHHHHHH--TTCSCEEECGGGGGSSCHH
T ss_pred HcCCCHHHhhhcccccCCCHHHHHHHHHcc--CCCEEEecCCCCCCHHHHHHHHH--hCCCEEEEchHHhCCCCHH
Confidence 012 1 147899999999987 6888 57999999999999995 8999999999999855433
No 68
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.29 E-value=7.9e-11 Score=124.73 Aligned_cols=133 Identities=16% Similarity=0.141 Sum_probs=98.3
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHH
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~le 337 (540)
+.++.+. ++|+|.|.|+.+. | .+..+.++|+.+++..++||.++.-. ..+.++.+.
T Consensus 147 e~~~~lv-eaGvdvIvldta~----------G-----~~~~~~e~I~~ik~~~~i~Vi~g~V~--------t~e~A~~a~ 202 (400)
T 3ffs_A 147 ERAKLLV-EAGVDVIVLDSAH----------G-----HSLNIIRTLKEIKSKMNIDVIVGNVV--------TEEATKELI 202 (400)
T ss_dssp HHHHHHH-HHTCSEEEECCSC----------C-----SBHHHHHHHHHHHTTCCCEEEEEEEC--------SHHHHHHHH
T ss_pred HHHHHHH-HcCCCEEEEeCCC----------C-----CcccHHHHHHHHHhcCCCeEEEeecC--------CHHHHHHHH
Confidence 3344444 4699999987432 1 35677888999988888999886332 246688899
Q ss_pred HcCCcEEEEe------cccccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 338 TWGASAVTVH------GRTRQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 338 eaGvdaItVH------gRtr~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
++|+|+|.++ +.++.....+.+.+..+.+|++.+. .++|||+.|||.+.+|+.+++. .|||+||||+.++.
T Consensus 203 ~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kala--lGAd~V~vGt~f~~ 280 (400)
T 3ffs_A 203 ENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALA--VGASSVMIGSILAG 280 (400)
T ss_dssp HTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHT--TTCSEEEECGGGTT
T ss_pred HcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHH--cCCCEEEEChHHhc
Confidence 9999999993 1233333345567888999887642 1699999999999999999997 69999999999998
Q ss_pred CCCchH
Q 009196 411 KPWIFT 416 (540)
Q Consensus 411 nPwif~ 416 (540)
-+.-..
T Consensus 281 t~Es~~ 286 (400)
T 3ffs_A 281 TEESPG 286 (400)
T ss_dssp BTTSSC
T ss_pred CCCCCc
Confidence 765433
No 69
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.23 E-value=1.8e-11 Score=120.58 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=88.7
Q ss_pred EEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH
Q 009196 314 ITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK 393 (540)
Q Consensus 314 VtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l 393 (540)
++||+|.++.....+..++++.++++|+++|+++..++..... ..+++.++++++.+ ++||+++|+|.|++++.+++
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~-~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l 98 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAF 98 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTCSS-CCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHH
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccCCC-cccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHH
Confidence 6899996554344578899999999999999999887654443 46899999999988 79999999999999999988
Q ss_pred hcCCCcCeeeecHHHHhCCCchHHHHhc
Q 009196 394 SDCPELASCMIARGALIKPWIFTEIKEQ 421 (540)
Q Consensus 394 ~~~~gaDgVMIGRgaL~nPwif~eik~~ 421 (540)
+ .|||+|+|||+++.+|+++.++.+.
T Consensus 99 ~--~Gad~V~ig~~~l~dp~~~~~~~~~ 124 (247)
T 3tdn_A 99 L--RGADKVSINTAAVENPSLITQIAQT 124 (247)
T ss_dssp H--TTCSEECCSHHHHHCTHHHHHHHHH
T ss_pred H--cCCCeeehhhHHhhChHHHHHHHHH
Confidence 6 6899999999999999999888753
No 70
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.23 E-value=4e-11 Score=122.30 Aligned_cols=144 Identities=13% Similarity=0.170 Sum_probs=97.9
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCC-------------
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFE------------- 324 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e------------- 324 (540)
+.|+.+. ++|+|+|.+. ||.+...+...|++++.+++.+.+|.+ .+++||.+|+|+|+.+
T Consensus 32 ~~a~~~~-~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I~~----~~~iPv~~k~r~g~~~~~~~~~a~GAd~V 104 (305)
T 2nv1_A 32 EQAKIAE-EAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEVMN----AVSIPVMAKARIGHIVEARVLEAMGVDYI 104 (305)
T ss_dssp HHHHHHH-HTTCSEEEEC--CC-------CCCCCCCCCHHHHHHHHH----HCSSCEEEEECTTCHHHHHHHHHHTCSEE
T ss_pred HHHHHHH-HcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHHHH----hCCCCEEecccccchHHHHHHHHCCCCEE
Confidence 3444555 5799999554 376666666778888889888777654 4588999999986410
Q ss_pred ---------C---h--------------hHHHHHHHHHHHcCCcEEEEe--------------ccc------------cc
Q 009196 325 ---------G---K--------------NRIDSLIADIGTWGASAVTVH--------------GRT------------RQ 352 (540)
Q Consensus 325 ---------~---~--------------~~~~~la~~leeaGvdaItVH--------------gRt------------r~ 352 (540)
+ . .+..+..+. .+.|+++|.++ .|+ +.
T Consensus 105 ~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a-~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~ 183 (305)
T 2nv1_A 105 DESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRR-IAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSED 183 (305)
T ss_dssp EECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHH-HHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred EEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHH-HHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccch
Confidence 0 0 012233333 36788888884 332 22
Q ss_pred CccC----CCcCHHHHHHHHHHcCCCceEE--EeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 353 QRYS----KLADWDYIYQCARKASDDLQVL--GNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 353 q~y~----g~adw~~I~~i~~~~~~~IPVI--gNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
+.++ .+.+|+++.++++.+ ++||+ ++|||.|++|+.+++. .|||+|+|||+++..+.
T Consensus 184 ~~~~~~~~~~~~~~~i~~i~~~~--~iPvi~~a~GGI~~~~d~~~~~~--~GadgV~vGsai~~~~~ 246 (305)
T 2nv1_A 184 ELMTEAKNLGAPYELLLQIKKDG--KLPVVNFAAGGVATPADAALMMQ--LGADGVFVGSGIFKSDN 246 (305)
T ss_dssp GHHHHHHHHTCCHHHHHHHHHHT--SCSSCEEBCSCCCSHHHHHHHHH--TTCSCEEECGGGGGSSC
T ss_pred hhhcccccccccHHHHHHHHHhc--CCCEEEEeccCCCCHHHHHHHHH--cCCCEEEEcHHHHcCCC
Confidence 3232 456799999999987 69999 9999999999999886 79999999999997543
No 71
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.22 E-value=1.8e-10 Score=120.79 Aligned_cols=148 Identities=9% Similarity=0.066 Sum_probs=128.3
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG 321 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G 321 (540)
|+...+.+.+++.|+++|+.+. +.||+.|+||+|| +++...++|++|++++ +++|.|+...|
T Consensus 138 ~~~~~~~~~~~e~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~ 200 (384)
T 2pgw_A 138 GYFYFLQGETAEELARDAAVGH-AQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANEG 200 (384)
T ss_dssp EBCEECCCSSHHHHHHHHHHHH-HTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTTC
T ss_pred EEEEECCCCCHHHHHHHHHHHH-HcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCCC
Confidence 3334555678999999999887 6799999999886 5788899999999999 68999999888
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCe
Q 009196 322 YFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 322 ~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDg 401 (540)
|+ .+++.++++.|++.|+++|. |.+ ++.+|+..+++++.+ ++||++++.+.+++++.++++. ..+|.
T Consensus 201 ~~--~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~-~~~d~ 267 (384)
T 2pgw_A 201 WS--VHDAINMCRKLEKYDIEFIE-------QPT-VSWSIPAMAHVREKV--GIPIVADQAAFTLYDVYEICRQ-RAADM 267 (384)
T ss_dssp CC--HHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHT-TCCSE
T ss_pred CC--HHHHHHHHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc-CCCCE
Confidence 84 57889999999999999885 444 457899999999998 7999999999999999999986 88999
Q ss_pred eeecHHHHhCCCchHHHHh
Q 009196 402 CMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 402 VMIGRgaL~nPwif~eik~ 420 (540)
|++..+.++.++-+.++..
T Consensus 268 v~ik~~~~GGit~~~~i~~ 286 (384)
T 2pgw_A 268 ICIGPREIGGIQPMMKAAA 286 (384)
T ss_dssp EEECHHHHTSHHHHHHHHH
T ss_pred EEEcchhhCCHHHHHHHHH
Confidence 9999999999988887754
No 72
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.22 E-value=1.8e-10 Score=120.12 Aligned_cols=209 Identities=11% Similarity=0.098 Sum_probs=133.4
Q ss_pred CCCCCCCcccccCcccCCcEEEccCCCCCCHHHHHHHHHhC-CCEEEeccceechhccCChhhhhhhhcccCC-CeEEEE
Q 009196 170 DGSLKTHSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLG-ADVTCGEMAMCTNLLQGQASEWALLRRHSSE-DLFGVQ 247 (540)
Q Consensus 170 ~~~~~~~p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~G-adl~~TEmi~a~~l~~g~~~e~~ll~~~~~e-~p~~vQ 247 (540)
|..+.|.+.-.+++.++.|++.|||+++++..+-.-+.+.| .+++-..| +..... ..++..+.. .++++.
T Consensus 41 dl~t~l~~~~~~~~~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~-s~e~~~-------~~i~~~p~~l~~v~~~ 112 (351)
T 2c6q_A 41 DLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHY-SLVQWQ-------EFAGQNPDCLEHLAAS 112 (351)
T ss_dssp BCCEEEECTTTCCEEEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTC-CHHHHH-------HHHHHCGGGCTTEEEE
T ss_pred eeEEEeccccCcCccccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCC-CHHHHH-------HHHhhCchhhheeEee
Confidence 44455554444678999999999999999977766555555 33332211 111100 111111111 235555
Q ss_pred ecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCCh
Q 009196 248 ICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGK 326 (540)
Q Consensus 248 L~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~ 326 (540)
+ |..++.+.++..++....|+|.|.+++.. | ++..+.+.++.+++.+ ++||.+|.-+.
T Consensus 113 ~-g~~~~~~~~~~~l~~~~~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v~t----- 171 (351)
T 2c6q_A 113 S-GTGSSDFEQLEQILEAIPQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNVVT----- 171 (351)
T ss_dssp E-CSSHHHHHHHHHHHHHCTTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEECS-----
T ss_pred c-CCChHHHHHHHHHHhccCCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeCCC-----
Confidence 5 55666676666555422489998887421 1 3566778899999888 89999875331
Q ss_pred hHHHHHHHHHHHcCCcEEEEeccc------ccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRT------RQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRt------r~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.+-|+.+.++|+|+|.|.... +...-.+.+....+.++.+.+. .++|||+.|||.+..|+.++|. .||
T Consensus 172 ---~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAla--lGA 246 (351)
T 2c6q_A 172 ---GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFG--AGA 246 (351)
T ss_dssp ---HHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHH--TTC
T ss_pred ---HHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHH--cCC
Confidence 356888999999999884211 1000012334555555544321 1699999999999999999998 699
Q ss_pred CeeeecHHHHhCC
Q 009196 400 ASCMIARGALIKP 412 (540)
Q Consensus 400 DgVMIGRgaL~nP 412 (540)
|+|||||.++.-+
T Consensus 247 ~~V~vG~~fl~~~ 259 (351)
T 2c6q_A 247 DFVMLGGMLAGHS 259 (351)
T ss_dssp SEEEESTTTTTBT
T ss_pred CceeccHHHhcCc
Confidence 9999999998643
No 73
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.17 E-value=7e-10 Score=120.79 Aligned_cols=138 Identities=12% Similarity=0.070 Sum_probs=102.5
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhH
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~ 328 (540)
|..++.+. .++.+. ++|+|+|+||++|. .++...++++++++.+ ++||.+|--.
T Consensus 251 G~~~~~~~-~a~~~~-~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~v~-------- 305 (514)
T 1jcn_A 251 GTREDDKY-RLDLLT-QAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGNVV-------- 305 (514)
T ss_dssp CSSTTHHH-HHHHHH-HTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEEEC--------
T ss_pred cCchhhHH-HHHHHH-HcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEecccc--------
Confidence 44444444 444455 58999999998873 2466778999999988 8999886221
Q ss_pred HHHHHHHHHHcCCcEEEEe---cc---cccCccCC---CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 329 IDSLIADIGTWGASAVTVH---GR---TRQQRYSK---LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVH---gR---tr~q~y~g---~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
..+.|+.+.++|+|+|.+. |. ++.....+ ...+..+.++++.+ ++|||++|||.++.|+.+++. .||
T Consensus 306 t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~GGI~~~~di~kala--~GA 381 (514)
T 1jcn_A 306 TAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADGGIQTVGHVVKALA--LGA 381 (514)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHHH--TTC
T ss_pred hHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEECCCCCHHHHHHHHH--cCC
Confidence 2456889999999999882 11 12111112 23467788888877 799999999999999999998 689
Q ss_pred CeeeecHHHHhCCCchH
Q 009196 400 ASCMIARGALIKPWIFT 416 (540)
Q Consensus 400 DgVMIGRgaL~nPwif~ 416 (540)
|+||+||+++..|+...
T Consensus 382 d~V~iG~~~l~~~e~~~ 398 (514)
T 1jcn_A 382 STVMMGSLLAATTEAPG 398 (514)
T ss_dssp SEEEESTTTTTSTTSSC
T ss_pred CeeeECHHHHcCCcCCc
Confidence 99999999999986543
No 74
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.15 E-value=2.3e-10 Score=110.50 Aligned_cols=159 Identities=12% Similarity=0.140 Sum_probs=108.5
Q ss_pred eEEEEecCC----cHHHHHHHHHHHHHhCCCCEEEec-----------CCCCCcccccC---C-----------------
Q 009196 243 LFGVQICGA----YPDTLARTVELIDQQCTVDFIDIN-----------MGCPIDIVVNK---G----------------- 287 (540)
Q Consensus 243 p~~vQL~G~----~p~~~a~AA~~~~~~aG~D~IDIN-----------~GCP~~~v~~~---G----------------- 287 (540)
.+.+|+.+. +++...+.|+.+. ++|+++|.++ .++|+-...++ +
T Consensus 8 ~~~~q~~~~~p~~~~~~~~~~a~~~~-~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~ 86 (223)
T 1y0e_A 8 IVSCQALPDEPLHSSFIMSKMALAAY-EGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIE 86 (223)
T ss_dssp EEECCCCTTSTTCCHHHHHHHHHHHH-HHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHH
T ss_pred EEEecCCCCCCCCCCccHHHHHHHHH-HCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHh
Confidence 456788888 6778888888876 6799998886 46776221111 1
Q ss_pred cccc-------ccCCc-hHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE--ecccccCccC
Q 009196 288 AGSC-------LLTKP-MRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV--HGRTRQQRYS 356 (540)
Q Consensus 288 ~Gsa-------Ll~~p-~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV--HgRtr~q~y~ 356 (540)
.|+. ...+| ..+.++++.+++.. +.++.+.+.. .+-+..++++|+++|.+ ++.+...+..
T Consensus 87 ~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t---------~~e~~~~~~~G~d~i~~~~~g~t~~~~~~ 157 (223)
T 1y0e_A 87 SQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIAT---------VEEAKNAARLGFDYIGTTLHGYTSYTQGQ 157 (223)
T ss_dssp HTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS---------HHHHHHHHHTTCSEEECTTTTSSTTSTTC
T ss_pred CCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCC---------HHHHHHHHHcCCCEEEeCCCcCcCCCCCC
Confidence 1221 11133 34556777777655 5666664431 12255688999999976 3444332221
Q ss_pred --CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchH
Q 009196 357 --KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFT 416 (540)
Q Consensus 357 --g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~ 416 (540)
...+|+.++++++.+ ++|||++|||.+++++.++++ .|||+|++||+++. |+...
T Consensus 158 ~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~--~Gad~v~vG~al~~-p~~~~ 214 (223)
T 1y0e_A 158 LLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMD--LGVHCSVVGGAITR-PKEIT 214 (223)
T ss_dssp CTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHH--TTCSEEEECHHHHC-HHHHH
T ss_pred CCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHH--cCCCEEEEChHHcC-cHHHH
Confidence 345789999999988 799999999999999999887 68999999998654 76443
No 75
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.13 E-value=1e-09 Score=119.11 Aligned_cols=141 Identities=17% Similarity=0.089 Sum_probs=106.3
Q ss_pred EEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCC
Q 009196 245 GVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYF 323 (540)
Q Consensus 245 ~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~ 323 (540)
++.+ |..++.+.++..++ ++|+|.|.||.+|+. +..+.++++.+++.. ++||.++--.
T Consensus 221 ~aav-G~~~~~~~~a~~l~--~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v~--- 279 (490)
T 4avf_A 221 GAAV-GTGADTGERVAALV--AAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNIA--- 279 (490)
T ss_dssp EEEE-CSSTTHHHHHHHHH--HTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEEC---
T ss_pred eeee-ccccchHHHHHHHh--hcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeeeC---
Confidence 4444 44455555555544 469999999988864 456778899998887 7899885322
Q ss_pred CChhHHHHHHHHHHHcCCcEEEE------ecccccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcC
Q 009196 324 EGKNRIDSLIADIGTWGASAVTV------HGRTRQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDC 396 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItV------HgRtr~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~ 396 (540)
..+.++.+.++|+|+|.| +..++.....+.+++..+.++++.+. .++|||++|||.+++|+.+++.
T Consensus 280 -----t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~-- 352 (490)
T 4avf_A 280 -----TAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMV-- 352 (490)
T ss_dssp -----SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHH--
T ss_pred -----cHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHH--
Confidence 135688999999999998 33334333445678899999988652 1599999999999999999997
Q ss_pred CCcCeeeecHHHHhCCC
Q 009196 397 PELASCMIARGALIKPW 413 (540)
Q Consensus 397 ~gaDgVMIGRgaL~nPw 413 (540)
.|||+||||++++.-..
T Consensus 353 ~GAd~V~vGs~~~~~~E 369 (490)
T 4avf_A 353 AGAYCVMMGSMFAGTEE 369 (490)
T ss_dssp HTCSEEEECTTTTTBTT
T ss_pred cCCCeeeecHHHhcCCC
Confidence 69999999999987553
No 76
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.11 E-value=2.3e-10 Score=124.43 Aligned_cols=136 Identities=20% Similarity=0.100 Sum_probs=103.2
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhH
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~ 328 (540)
|..++.+..+..++ ++|+|.|.||++|| +...+.++++.+++.. ++||.++--.
T Consensus 227 G~~~d~~~~a~~l~--~aG~d~I~id~a~g---------------~~~~~~~~i~~ir~~~p~~~Vi~g~v~-------- 281 (496)
T 4fxs_A 227 GAAPGNEERVKALV--EAGVDVLLIDSSHG---------------HSEGVLQRIRETRAAYPHLEIIGGNVA-------- 281 (496)
T ss_dssp CSSSCCHHHHHHHH--HTTCSEEEEECSCT---------------TSHHHHHHHHHHHHHCTTCCEEEEEEC--------
T ss_pred ccccchHHHHHHHH--hccCceEEeccccc---------------cchHHHHHHHHHHHHCCCceEEEcccC--------
Confidence 44445555555444 47999999999986 3456778899998887 7899885322
Q ss_pred HHHHHHHHHHcCCcEEEEe------cccccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcCCCcCe
Q 009196 329 IDSLIADIGTWGASAVTVH------GRTRQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVH------gRtr~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~~gaDg 401 (540)
..+.++.+.++|+|+|.|. ..++.....+.+++..+.++++.+. .++|||++|||.+++|+.+++. .|||+
T Consensus 282 t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala--~GAd~ 359 (496)
T 4fxs_A 282 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIA--AGASC 359 (496)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH--TTCSE
T ss_pred cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHH--cCCCe
Confidence 1356888999999999983 3344433445678888888887541 1599999999999999999997 69999
Q ss_pred eeecHHHHhCC
Q 009196 402 CMIARGALIKP 412 (540)
Q Consensus 402 VMIGRgaL~nP 412 (540)
||+||.++.-.
T Consensus 360 V~iGs~f~~t~ 370 (496)
T 4fxs_A 360 VMVGSMFAGTE 370 (496)
T ss_dssp EEESTTTTTBT
T ss_pred EEecHHHhcCC
Confidence 99999988744
No 77
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.07 E-value=1.7e-10 Score=113.14 Aligned_cols=99 Identities=12% Similarity=0.060 Sum_probs=87.0
Q ss_pred EEEEecCCCCCCh----hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHH
Q 009196 314 ITIKVRTGYFEGK----NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDW 389 (540)
Q Consensus 314 VtVKiR~G~~e~~----~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa 389 (540)
..||+|.||.++. .+..++++.++++|+++|++|.++..+... ..+|+.+++++ .+ ++||+++|+|.+.+++
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~-~~~~~~i~~i~-~~--~ipvi~~Ggi~~~~~~ 88 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIENS-GENLPVLEKLS-EF--AEHIQIGGGIRSLDYA 88 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHHCC-CTTHHHHHHGG-GG--GGGEEEESSCCSHHHH
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEecccccccCC-chhHHHHHHHH-hc--CCcEEEECCCCCHHHH
Confidence 6899999997654 478999999999999999999887644333 46799999998 77 7999999999999999
Q ss_pred HHHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 390 NKHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 390 ~~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
.++++ .|||+|++|++++.+|+++.++
T Consensus 89 ~~~~~--~Gad~V~lg~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 89 EKLRK--LGYRRQIVSSKVLEDPSFLKSL 115 (241)
T ss_dssp HHHHH--TTCCEEEECHHHHHCTTHHHHH
T ss_pred HHHHH--CCCCEEEECchHhhChHHHHHH
Confidence 99887 6899999999999999999998
No 78
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.05 E-value=1.7e-09 Score=112.26 Aligned_cols=148 Identities=8% Similarity=-0.085 Sum_probs=123.3
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+...+...+++.|+++|+.+. +.||+.|.||+||+ +++...+++++|++++ +++|.|+...
T Consensus 135 p~~~~~g~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 198 (359)
T 1mdl_A 135 QAYDSHSLDGVKLATERAVTAA-ELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYNQ 198 (359)
T ss_dssp EEEEECCSCHHHHHHHHHHHHH-HTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeeecCCCCHHHHHHHHHHHH-HcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4444433368999999999887 67999999999882 4678889999999988 6899999999
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
||+ .+++.++++.|++.|+++| +|.+ .+.+|+..+++++.+ ++||++++.+.+++++.++++. ..+|
T Consensus 199 ~~~--~~~a~~~~~~l~~~~i~~i-------E~P~-~~~~~~~~~~l~~~~--~iPI~~de~~~~~~~~~~~i~~-~~~d 265 (359)
T 1mdl_A 199 SLD--VPAAIKRSQALQQEGVTWI-------EEPT-LQHDYEGHQRIQSKL--NVPVQMGENWLGPEEMFKALSI-GACR 265 (359)
T ss_dssp CSC--HHHHHHHHHHHHHHTCSCE-------ECCS-CTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHT-TCCS
T ss_pred CCC--HHHHHHHHHHHHHhCCCeE-------ECCC-ChhhHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHc-CCCC
Confidence 984 5788999999999999987 3444 457899999999988 7999999999999999999986 8899
Q ss_pred eeeecHHHHhCCCchHHHH
Q 009196 401 SCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 401 gVMIGRgaL~nPwif~eik 419 (540)
.|++-.+.++.++-+.++.
T Consensus 266 ~v~ik~~~~GGi~~~~~i~ 284 (359)
T 1mdl_A 266 LAMPDAMKIGGVTGWIRAS 284 (359)
T ss_dssp EECCBTTTTTHHHHHHHHH
T ss_pred EEeecchhhCCHHHHHHHH
Confidence 9999887777766666654
No 79
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=99.02 E-value=2e-09 Score=109.69 Aligned_cols=203 Identities=14% Similarity=0.058 Sum_probs=145.4
Q ss_pred cEEEccCCCCCCHHHHHHHHHhCCCEEEeccc-eechhccCChh----hhh-------hhhcccCCCeEEEEe---cCCc
Q 009196 188 KLYLAPLTTVGNLPFRRVCKVLGADVTCGEMA-MCTNLLQGQAS----EWA-------LLRRHSSEDLFGVQI---CGAY 252 (540)
Q Consensus 188 rliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi-~a~~l~~g~~~----e~~-------ll~~~~~e~p~~vQL---~G~~ 252 (540)
..+..| +.-|.++-+++.+.|.+.+++--. .+. -..|.+. ++. .+.+ ....|+++.+ +|.+
T Consensus 17 ~~i~~~--~a~D~~sA~~~~~aG~~ai~vs~~~~a~-~~~G~pD~~~vt~~em~~~~~~I~~-~~~~PviaD~d~Gyg~~ 92 (295)
T 1xg4_A 17 NPLQIV--GTINANHALLAQRAGYQAIYLSGGGVAA-GSLGLPDLGISTLDDVLTDIRRITD-VCSLPLLVDADIGFGSS 92 (295)
T ss_dssp SSEEEE--ECSSHHHHHHHHHTTCSCEEECHHHHHH-TTTCCCSSSCSCHHHHHHHHHHHHH-HCCSCEEEECTTCSSSS
T ss_pred CcEEEe--cCcCHHHHHHHHHcCCCEEEECchHhhh-hhcCCCCCCCCCHHHHHHHHHHHHh-hCCCCEEecCCcccCCC
Confidence 344444 778999999999999998776543 221 1123322 111 1112 2346899999 8889
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCC--CCChhHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGY--FEGKNRID 330 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~--~e~~~~~~ 330 (540)
+....+.++.+. ++|+++|.|..+|. ++++....|..|....+.+.+|..++....+.++.|.-|+.- .+..++++
T Consensus 93 ~~~~~~~v~~l~-~aGa~gv~iEd~~~-~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai 170 (295)
T 1xg4_A 93 AFNVARTVKSMI-KAGAAGLHIEDQVG-AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAI 170 (295)
T ss_dssp HHHHHHHHHHHH-HHTCSEEEEECBCS-SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHH
T ss_pred HHHHHHHHHHHH-HcCCeEEEECCCCC-CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHH
Confidence 999999999998 68999999999984 445555556667766666666665555555778889889842 12236788
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC--CHH-HHHHHHhcCCCcCeeeecHH
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY--SYL-DWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~--s~e-Da~~~l~~~~gaDgVMIGRg 407 (540)
+-++.++++|+|+|.+|+. .+++.++++.+.+ ++|+++|...+ ++. .+.+ |.+ .|++.|++|.+
T Consensus 171 ~ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~--~iP~~~N~~~~g~~p~~~~~e-L~~-~G~~~v~~~~~ 237 (295)
T 1xg4_A 171 ERAQAYVEAGAEMLFPEAI---------TELAMYRQFADAV--QVPILANITEFGATPLFTTDE-LRS-AHVAMALYPLS 237 (295)
T ss_dssp HHHHHHHHTTCSEEEETTC---------CSHHHHHHHHHHH--CSCBEEECCSSSSSCCCCHHH-HHH-TTCSEEEESSH
T ss_pred HHHHHHHHcCCCEEEEeCC---------CCHHHHHHHHHHc--CCCEEEEecccCCCCCCCHHH-HHH-cCCCEEEEChH
Confidence 8899999999999999875 3688999999999 69999998752 222 2233 454 79999999998
Q ss_pred HH
Q 009196 408 AL 409 (540)
Q Consensus 408 aL 409 (540)
++
T Consensus 238 ~~ 239 (295)
T 1xg4_A 238 AF 239 (295)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 80
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.01 E-value=2e-09 Score=112.31 Aligned_cols=140 Identities=9% Similarity=0.050 Sum_probs=122.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
+++.++++|+.+. +.||+.|.|++||+ +++...++|++|++++ +++|.|+...||+ .+++
T Consensus 146 ~~e~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~--~~~a 207 (371)
T 2ovl_A 146 PVADLKTQADRFL-AGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWT--VDGA 207 (371)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSC--HHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HHHH
Confidence 7999999999887 67999999999984 4678889999999988 6899999999984 5789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
.++++.|++.|+++| +|.+ .+.+|+..+++++.+ ++||++++.+.+++++.++++. ..+|.|++-.+.+
T Consensus 208 ~~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~ 276 (371)
T 2ovl_A 208 IRAARALAPFDLHWI-------EEPT-IPDDLVGNARIVRES--GHTIAGGENLHTLYDFHNAVRA-GSLTLPEPDVSNI 276 (371)
T ss_dssp HHHHHHHGGGCCSEE-------ECCS-CTTCHHHHHHHHHHH--CSCEEECTTCCSHHHHHHHHHH-TCCSEECCCTTTT
T ss_pred HHHHHHHHhcCCCEE-------ECCC-CcccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHc-CCCCEEeeCcccc
Confidence 999999999999987 3544 457899999999998 7999999999999999999987 8899999998888
Q ss_pred hCCCchHHHHh
Q 009196 410 IKPWIFTEIKE 420 (540)
Q Consensus 410 ~nPwif~eik~ 420 (540)
+.++-+.++..
T Consensus 277 GGi~~~~~i~~ 287 (371)
T 2ovl_A 277 GGYTTFRKVAA 287 (371)
T ss_dssp TSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 88877777654
No 81
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=98.99 E-value=1.4e-09 Score=107.12 Aligned_cols=121 Identities=11% Similarity=0.054 Sum_probs=92.7
Q ss_pred hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEE
Q 009196 266 QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVT 345 (540)
Q Consensus 266 ~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaIt 345 (540)
++|+|.|=|+.++ ..+|+.+.++++.+++. ++++.+.+.. .+.+++++++|+++|.
T Consensus 99 ~aGad~I~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~t---------~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 99 QAGADIIAFDASF--------------RSRPVDIDSLLTRIRLH-GLLAMADCST---------VNEGISCHQKGIEFIG 154 (229)
T ss_dssp HHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECSS---------HHHHHHHHHTTCSEEE
T ss_pred HcCCCEEEECccc--------------cCChHHHHHHHHHHHHC-CCEEEEecCC---------HHHHHHHHhCCCCEEE
Confidence 4699999887543 23566778888888764 7788876542 4567888999999995
Q ss_pred --EecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHH
Q 009196 346 --VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTE 417 (540)
Q Consensus 346 --VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~e 417 (540)
+||+|... +...++|+.+.++++. ++|||++|||.|++|+.+++. .|||+|||| .++.+||.+.+
T Consensus 155 ~~~~g~t~~~-~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~--~GadgV~VG-sai~~p~~~~~ 221 (229)
T 3q58_A 155 TTLSGYTGPI-TPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIE--HGAWAVTVG-SAITRIEHICQ 221 (229)
T ss_dssp CTTTTSSSSC-CCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHH--TTCSEEEEC-HHHHCHHHHHH
T ss_pred ecCccCCCCC-cCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHH--cCCCEEEEc-hHhcChHHHHH
Confidence 46665443 3345799999999874 599999999999999999887 699999999 55557876543
No 82
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=98.98 E-value=2.8e-09 Score=111.53 Aligned_cols=144 Identities=10% Similarity=-0.035 Sum_probs=120.8
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+...+...+++.++++|+.+. +.||+.|+|++|| +++...++|++|++++ ++||.|+...
T Consensus 136 ~~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~ 198 (379)
T 2rdx_A 136 PMYRVAPQRSEAETRAELARHR-AAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQ 198 (379)
T ss_dssp EBCEECCCSCSHHHHHHHHHHH-HTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTT
T ss_pred eEEEEecCCCHHHHHHHHHHHH-HcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 3333343368999999999887 6799999999987 4688899999999998 5899999999
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
||+ .+++.++++.|++.|+ +| +|.+. +|+..+++++.+ ++||++++.+.+++++.++++. ..+|
T Consensus 199 ~~~--~~~a~~~~~~l~~~~i-~i-------E~P~~---~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~-~~~d 262 (379)
T 2rdx_A 199 GWR--VDNAIRLARATRDLDY-IL-------EQPCR---SYEECQQVRRVA--DQPMKLDECVTGLHMAQRIVAD-RGAE 262 (379)
T ss_dssp CSC--HHHHHHHHHHTTTSCC-EE-------ECCSS---SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHH-TCCS
T ss_pred CCC--HHHHHHHHHHHHhCCe-EE-------eCCcC---CHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc-CCCC
Confidence 984 5788999999999999 76 34442 999999999988 7999999999999999999987 8899
Q ss_pred eeeecHHHHhCCCchHHHH
Q 009196 401 SCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 401 gVMIGRgaL~nPwif~eik 419 (540)
.|++-.+.++.++-+.++.
T Consensus 263 ~v~ik~~~~GGit~~~~i~ 281 (379)
T 2rdx_A 263 ICCLKISNLGGLSKARRTR 281 (379)
T ss_dssp EEEEETTTTTSHHHHHHHH
T ss_pred EEEEeccccCCHHHHHHHH
Confidence 9999888877776666654
No 83
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=98.96 E-value=2.8e-09 Score=103.93 Aligned_cols=100 Identities=16% Similarity=0.113 Sum_probs=76.5
Q ss_pred HHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEE--EEeccccc-CccCCCcCHHHHHHHHHHcCC
Q 009196 298 RMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAV--TVHGRTRQ-QRYSKLADWDYIYQCARKASD 373 (540)
Q Consensus 298 ~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaI--tVHgRtr~-q~y~g~adw~~I~~i~~~~~~ 373 (540)
.+.++++.+++.. +.++.+.+++ .+-+..+.++|+|+| ++++.+.. +.+. ..+++.++++++.
T Consensus 119 ~~~~~i~~i~~~~~~~~v~~~~~t---------~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~-~~~~~~i~~~~~~--- 185 (234)
T 1yxy_A 119 DIASFIRQVKEKYPNQLLMADIST---------FDEGLVAHQAGIDFVGTTLSGYTPYSRQEA-GPDVALIEALCKA--- 185 (234)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECSS---------HHHHHHHHHTTCSEEECTTTTSSTTSCCSS-SCCHHHHHHHHHT---
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCC---------HHHHHHHHHcCCCEEeeeccccCCCCcCCC-CCCHHHHHHHHhC---
Confidence 4567777777765 6677775542 122677889999999 78876532 2233 4689999999875
Q ss_pred CceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 374 DLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 374 ~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
++||++.|||.|++++.+++. .|||+|++||+++. |+
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~--~Gad~v~vGsal~~-p~ 222 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKIND--LGVAGIVVGGAITR-PK 222 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHT--TCCSEEEECHHHHC-HH
T ss_pred CCCEEEECCCCCHHHHHHHHH--CCCCEEEEchHHhC-hH
Confidence 599999999999999999886 69999999998876 53
No 84
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=98.95 E-value=2.9e-09 Score=104.94 Aligned_cols=119 Identities=9% Similarity=0.037 Sum_probs=91.0
Q ss_pred hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEE
Q 009196 266 QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVT 345 (540)
Q Consensus 266 ~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaIt 345 (540)
++|+|.|=|+..+ ..+|+.+.++++.+++. ++++.+.+.. .+.++.++++|+++|.
T Consensus 99 ~~Gad~V~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~t---------~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 99 QAGAAIIAVDGTA--------------RQRPVAVEALLARIHHH-HLLTMADCSS---------VDDGLACQRLGADIIG 154 (232)
T ss_dssp HHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECCS---------HHHHHHHHHTTCSEEE
T ss_pred HcCCCEEEECccc--------------cCCHHHHHHHHHHHHHC-CCEEEEeCCC---------HHHHHHHHhCCCCEEE
Confidence 4699999887432 24567778888888764 7788876542 3567888999999995
Q ss_pred --EecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 346 --VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 346 --VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
+||++.... ...++|+.+.++++. ++|||++|||.|++|+.+++. .|||+||||.++ .+||..
T Consensus 155 ~~~~g~t~~~~-~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~--~GadgV~VGsal-~~p~~~ 219 (232)
T 3igs_A 155 TTMSGYTTPDT-PEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIR--YGAWAVTVGSAI-TRLEHI 219 (232)
T ss_dssp CTTTTSSSSSC-CSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHH--TTCSEEEECHHH-HCHHHH
T ss_pred EcCccCCCCCC-CCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHH--cCCCEEEEehHh-cCHHHH
Confidence 456654433 245799999999885 599999999999999999887 699999999555 467644
No 85
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=98.94 E-value=6e-09 Score=109.46 Aligned_cols=146 Identities=10% Similarity=-0.015 Sum_probs=122.2
Q ss_pred eEEEEec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEec
Q 009196 243 LFGVQIC-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVR 319 (540)
Q Consensus 243 p~~vQL~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR 319 (540)
|+...+. ..+++.|+++|+.+. +.||+.|.|++|| .+++. .++|++|++++ +++|.|+..
T Consensus 154 p~~~~~g~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan 216 (388)
T 2nql_A 154 PAYVSGLPERTLKARGELAKYWQ-DRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMH 216 (388)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHH-HTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECC
T ss_pred EeeEEeCCCCCHHHHHHHHHHHH-HhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECC
Confidence 4444453 368999999999887 6799999999876 24677 89999999987 689999999
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.||+ .+++.++++.|++.|+++| +|.+ .+.+|+..+++++.+ ++||++++.+.+++++.++++. ..+
T Consensus 217 ~~~~--~~~a~~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~-~~~ 283 (388)
T 2nql_A 217 WNQT--PERALELIAEMQPFDPWFA-------EAPV-WTEDIAGLEKVSKNT--DVPIAVGEEWRTHWDMRARIER-CRI 283 (388)
T ss_dssp SCSC--HHHHHHHHHHHGGGCCSCE-------ECCS-CTTCHHHHHHHHTSC--CSCEEECTTCCSHHHHHHHHTT-SCC
T ss_pred CCCC--HHHHHHHHHHHhhcCCCEE-------ECCC-ChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc-CCC
Confidence 8984 5788999999999999987 3444 456899999999988 7999999999999999999986 789
Q ss_pred CeeeecHHHHhCCCchHHHH
Q 009196 400 ASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 400 DgVMIGRgaL~nPwif~eik 419 (540)
|.|++-.+. +.++-+.++.
T Consensus 284 d~v~ik~~~-GGit~~~~i~ 302 (388)
T 2nql_A 284 AIVQPEMGH-KGITNFIRIG 302 (388)
T ss_dssp SEECCCHHH-HCHHHHHHHH
T ss_pred CEEEecCCC-CCHHHHHHHH
Confidence 999998888 8777666664
No 86
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.92 E-value=6.6e-09 Score=112.42 Aligned_cols=137 Identities=20% Similarity=0.149 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHH
Q 009196 255 TLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLI 333 (540)
Q Consensus 255 ~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la 333 (540)
.+.+.++.+. ++|+|.|.||++. | .+....++++++++.+ ++||.++--. + .+.+
T Consensus 237 ~~~~~a~~l~-~aGvd~v~i~~~~----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~~----t----~e~a 292 (494)
T 1vrd_A 237 ETMERVEKLV-KAGVDVIVIDTAH----------G-----HSRRVIETLEMIKADYPDLPVVAGNVA----T----PEGT 292 (494)
T ss_dssp THHHHHHHHH-HTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEEC----S----HHHH
T ss_pred hHHHHHHHHH-HhCCCEEEEEecC----------C-----chHHHHHHHHHHHHHCCCceEEeCCcC----C----HHHH
Confidence 3445666665 6899999998641 2 3466778899999888 7999886322 1 3446
Q ss_pred HHHHHcCCcEEEEeccc------ccCccCCCcCHHHHHHHHHHcCC-CceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 334 ADIGTWGASAVTVHGRT------RQQRYSKLADWDYIYQCARKASD-DLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 334 ~~leeaGvdaItVHgRt------r~q~y~g~adw~~I~~i~~~~~~-~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
+.+.++|+|+|.|.+.. +.....+.+.+..+..+++.+.. ++|||+.|||.++.|+.+++. .|||+||+||
T Consensus 293 ~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala--~GAd~V~iGr 370 (494)
T 1vrd_A 293 EALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALA--AGAESVMVGS 370 (494)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHH--TTCSEEEESH
T ss_pred HHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHH--cCCCEEEECH
Confidence 88899999999994321 11111234556667766665211 699999999999999999998 6899999999
Q ss_pred HHHhCCCchHH
Q 009196 407 GALIKPWIFTE 417 (540)
Q Consensus 407 gaL~nPwif~e 417 (540)
+++..|....+
T Consensus 371 ~~l~~~e~~~~ 381 (494)
T 1vrd_A 371 IFAGTEEAPGE 381 (494)
T ss_dssp HHHTBTTSSSE
T ss_pred HHhcCCcCCcc
Confidence 99998877443
No 87
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=98.92 E-value=6.5e-09 Score=108.78 Aligned_cols=146 Identities=13% Similarity=0.082 Sum_probs=123.4
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEec
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVR 319 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR 319 (540)
-|+...+...+++.+.++|+.+. +.||+.|.|++||| +++...+++++|++++ ++++.|+..
T Consensus 135 v~~~~~~~~~~~e~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan 198 (378)
T 2qdd_A 135 VPINSSISTGTPDQMLGLIAEAA-AQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDVN 198 (378)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHH-HHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEECT
T ss_pred CceEEEecCCCHHHHHHHHHHHH-HHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 34455565578999999998887 56999999999986 4678889999999988 689999999
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.||+ .+++.++++.|+ .|+ +| +|.+. +|+..+++++.+ ++||++++.+.+++++.++++. ..+
T Consensus 199 ~~~~--~~~a~~~~~~l~-~~i-~i-------EqP~~---d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~-~~~ 261 (378)
T 2qdd_A 199 RAWT--PAIAVEVLNSVR-ARD-WI-------EQPCQ---TLDQCAHVARRV--ANPIMLDECLHEFSDHLAAWSR-GAC 261 (378)
T ss_dssp TCCC--HHHHHHHHTSCC-CCC-EE-------ECCSS---SHHHHHHHHTTC--CSCEEECTTCCSHHHHHHHHHH-TCC
T ss_pred CCCC--HHHHHHHHHHhC-CCc-EE-------EcCCC---CHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHh-CCC
Confidence 8884 578889999998 888 65 45553 999999999988 7999999999999999999987 889
Q ss_pred CeeeecHHHHhCCCchHHHHh
Q 009196 400 ASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 400 DgVMIGRgaL~nPwif~eik~ 420 (540)
|.|++-.+.++.++-+.++..
T Consensus 262 d~v~ik~~~~GGi~~~~~i~~ 282 (378)
T 2qdd_A 262 EGVKIKPNRVGGLTRARQIRD 282 (378)
T ss_dssp SEEEECHHHHTSHHHHHHHHH
T ss_pred CEEEecccccCCHHHHHHHHH
Confidence 999999999988887777643
No 88
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=98.92 E-value=4.6e-08 Score=97.94 Aligned_cols=209 Identities=11% Similarity=-0.013 Sum_probs=122.1
Q ss_pred cccccCcccCCcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecC-CcHHH
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICG-AYPDT 255 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G-~~p~~ 255 (540)
+.++.+++|+||++++.-..-+-.-+.......|+|++-.-+=.+++...+...-+.+++. -..++..+..+ .+++.
T Consensus 3 ~~~i~~~~~~~~~~~~t~g~p~~~~~~~~l~~~Gad~ielg~pr~~~~g~~~~~~~~~l~~--~~~~~~pn~~~~~~~~~ 80 (264)
T 1xm3_A 3 MLTIGGKSFQSRLLLGTGKYPSFDIQKEAVAVSESDILTFAVRRMNIFEASQPNFLEQLDL--SKYTLLPNTAGASTAEE 80 (264)
T ss_dssp CEEETTEEESCCEEEECSCSSCHHHHHHHHHHHTCSEEEEETTSSTTC-------CTTCCG--GGSEEEEECTTCSSHHH
T ss_pred CeEECCEEecCCCEEEecCCCCHHHHHHHHHHcCCeEEEEcccccccCCCCHHHHHHHHHh--cCCeEcCCccccCCHHH
Confidence 4678999999999998654423234444555679998722221111100011112223321 12455567776 67777
Q ss_pred HHHHHHHHHHhC-CCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHH
Q 009196 256 LARTVELIDQQC-TVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSL 332 (540)
Q Consensus 256 ~a~AA~~~~~~a-G~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~l 332 (540)
..+.++++. ++ |.+.|.++.- | +.. .+ .+...++++.+++.+ ++.+.+ +-. .+ .+.
T Consensus 81 ~~~f~~~a~-~agg~~~i~l~i~-~------d~~--~~---~~e~~~~~~~a~~~~~~g~~vi~-~~~---~~----~~~ 139 (264)
T 1xm3_A 81 AVRIARLAK-ASGLCDMIKVEVI-G------CSR--SL---LPDPVETLKASEQLLEEGFIVLP-YTS---DD----VVL 139 (264)
T ss_dssp HHHHHHHHH-HTTCCSSEEECCB-C------CTT--TC---CBCHHHHHHHHHHHHHTTCCEEE-EEC---SC----HHH
T ss_pred HHHHHHHHH-HcCCCCeEEEeec-C------CCc--cc---ccchHHHHHHHHHHHCCCeEEEE-EcC---CC----HHH
Confidence 667777776 44 5667777641 1 000 01 122345566555543 333321 111 11 135
Q ss_pred HHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 333 IADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
++++.+.|+++|...+.....+ .+...++.++.+++.. ++||++-|||.+++|+.++++ .|||+|.||++++.-+
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~-~~~~~~~~l~~i~~~~--~iPviv~gGI~t~eda~~~~~--~GAdgViVGSAi~~a~ 214 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSG-QGILNPLNLSFIIEQA--KVPVIVDAGIGSPKDAAYAME--LGADGVLLNTAVSGAD 214 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCC-CCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHH--TTCSEEEESHHHHTSS
T ss_pred HHHHHHhCCCEEEECCcccCCC-CCCCCHHHHHHHHhcC--CCCEEEEeCCCCHHHHHHHHH--cCCCEEEEcHHHhCCC
Confidence 7788899999993312211101 1233588999999876 799999999999999999887 7999999999977554
Q ss_pred C
Q 009196 413 W 413 (540)
Q Consensus 413 w 413 (540)
.
T Consensus 215 d 215 (264)
T 1xm3_A 215 D 215 (264)
T ss_dssp S
T ss_pred C
Confidence 3
No 89
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=98.92 E-value=6.8e-09 Score=108.98 Aligned_cols=148 Identities=9% Similarity=-0.012 Sum_probs=126.9
Q ss_pred CCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEE
Q 009196 240 SEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIK 317 (540)
Q Consensus 240 ~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVK 317 (540)
...|+..++.+.+|+.+++.|+.+. +.||+.|.|++|| +++...++|++||+++ +++|.|+
T Consensus 133 ~~v~~~~~~~~~~~e~~~~~a~~~~-~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vD 195 (378)
T 3eez_A 133 TPRPIASSVGAKSVEETRAVIDRYR-QRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYD 195 (378)
T ss_dssp SCEEBBCCBCSCCHHHHHHHHHHHH-HTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEE
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHH-hCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 3446667888899999999998876 5799999999987 3667788999999998 6899999
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP 397 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ 397 (540)
...+|+ ..++.++++.|++.|+ +| +|.+ .+|+.++++++.+ ++||++++.+.+++++.++++. .
T Consensus 196 an~~~~--~~~a~~~~~~l~~~~i-~i-------EqP~---~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~ 259 (378)
T 3eez_A 196 VNRGWT--RQQALRVMRATEDLHV-MF-------EQPG---ETLDDIAAIRPLH--SAPVSVDECLVTLQDAARVARD-G 259 (378)
T ss_dssp CTTCCC--HHHHHHHHHHTGGGTC-CE-------ECCS---SSHHHHHHTGGGC--CCCEEECTTCCSHHHHHHHHHT-T
T ss_pred CCCCCC--HHHHHHHHHHhccCCe-EE-------ecCC---CCHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHc-C
Confidence 999995 5788999999999998 77 3443 2899999999988 7999999999999999999986 8
Q ss_pred CcCeeeecHHHHhCCCchHHHHh
Q 009196 398 ELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 398 gaDgVMIGRgaL~nPwif~eik~ 420 (540)
.+|.|++-.+.++.++-+.+|..
T Consensus 260 ~~d~v~ik~~~~GGit~~~~ia~ 282 (378)
T 3eez_A 260 LAEVFGIKLNRVGGLTRAARMRD 282 (378)
T ss_dssp CCSEEEEEHHHHTSHHHHHHHHH
T ss_pred CCCEEEeCchhcCCHHHHHHHHH
Confidence 89999999999999888777754
No 90
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=98.91 E-value=8.7e-09 Score=107.27 Aligned_cols=149 Identities=15% Similarity=0.086 Sum_probs=126.5
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEec
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVR 319 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR 319 (540)
-|+..++.+.+++.|.++|+.+. +.||+.|.|++|+ +++...+++++|++++ ++++.|+..
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan 193 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMI-QKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVN 193 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHH-HTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred eeeeEEecCCChHHHHHHHHHHH-HcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECC
Confidence 35557888889999999999887 5799999999874 4788889999999988 689999999
Q ss_pred CCCCCChhHHH-HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 320 TGYFEGKNRID-SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 320 ~G~~e~~~~~~-~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
.||+ .+++. ++++.|++.|+++|. |.+ .+.+|+..+++++.+ ++||++++.+++++++.++++. ..
T Consensus 194 ~~~~--~~~a~~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~-~~ 260 (369)
T 2p8b_A 194 QGWK--NSANTLTALRSLGHLNIDWIE-------QPV-IADDIDAMAHIRSKT--DLPLMIDEGLKSSREMRQIIKL-EA 260 (369)
T ss_dssp TTTB--SHHHHHHHHHTSTTSCCSCEE-------CCB-CTTCHHHHHHHHHTC--CSCEEESTTCCSHHHHHHHHHH-TC
T ss_pred CCCC--HHHHHHHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHh-CC
Confidence 8985 46788 999999999999873 554 457899999999988 7999999999999999999987 88
Q ss_pred cCeeeecHHHHhCCCchHHHHh
Q 009196 399 LASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~eik~ 420 (540)
+|.|++-.+-++.++-+.++..
T Consensus 261 ~d~v~ik~~~~GGit~~~~i~~ 282 (369)
T 2p8b_A 261 ADKVNIKLMKCGGIYPAVKLAH 282 (369)
T ss_dssp CSEEEECHHHHTSHHHHHHHHH
T ss_pred CCEEEeecchhCCHHHHHHHHH
Confidence 9999999888888776666643
No 91
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.86 E-value=2.8e-08 Score=108.35 Aligned_cols=134 Identities=17% Similarity=0.124 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~ 331 (540)
.+.+.++..+ . ++|+|.|.|+..+|. ...+.++++.+++.. ++||.++--. ..+
T Consensus 255 ~d~~era~aL-v-eaGvd~I~Id~a~g~---------------~~~v~~~i~~i~~~~~~~~vi~g~v~--------t~e 309 (511)
T 3usb_A 255 ADAMTRIDAL-V-KASVDAIVLDTAHGH---------------SQGVIDKVKEVRAKYPSLNIIAGNVA--------TAE 309 (511)
T ss_dssp TTHHHHHHHH-H-HTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTSEEEEEEEC--------SHH
T ss_pred cchHHHHHHH-H-hhccceEEecccccc---------------hhhhhhHHHHHHHhCCCceEEeeeec--------cHH
Confidence 3445554444 4 579999999988752 455778888888877 5788886432 245
Q ss_pred HHHHHHHcCCcEEEE------ecccccCccCCCcCHHHHHHHHHHcCC-CceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 332 LIADIGTWGASAVTV------HGRTRQQRYSKLADWDYIYQCARKASD-DLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 332 la~~leeaGvdaItV------HgRtr~q~y~g~adw~~I~~i~~~~~~-~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.++.+.++|+|+|.+ +..++.....+.+.+..+.++++.+.. ++|||+.|||.+++|+.+++. .|||+||+
T Consensus 310 ~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala--~GA~~V~v 387 (511)
T 3usb_A 310 ATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALA--AGAHVVML 387 (511)
T ss_dssp HHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHH--TTCSEEEE
T ss_pred HHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHH--hCchhhee
Confidence 688899999999998 222232223455678888777654421 599999999999999999997 69999999
Q ss_pred cHHHHhCCC
Q 009196 405 ARGALIKPW 413 (540)
Q Consensus 405 GRgaL~nPw 413 (540)
||.++.-..
T Consensus 388 Gs~~~~~~e 396 (511)
T 3usb_A 388 GSMFAGVAE 396 (511)
T ss_dssp STTTTTBTT
T ss_pred cHHHhcCcc
Confidence 998765443
No 92
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=98.85 E-value=2.9e-08 Score=104.75 Aligned_cols=154 Identities=10% Similarity=0.053 Sum_probs=125.7
Q ss_pred CeEEEEec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCc-hHHHHHHHHhcccc--cccEEEE
Q 009196 242 DLFGVQIC-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKP-MRMKGIIEATSGTV--DKPITIK 317 (540)
Q Consensus 242 ~p~~vQL~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p-~~l~eIv~av~~~v--~iPVtVK 317 (540)
-|+...+. +.+++.|.++|+.+. +.||+.|.|++ ||+ |+ ++ +...++|++|++++ +++|.|+
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~vD 199 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAAR-RDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMVD 199 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHH-HTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHH-HhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence 45544443 678999999999887 67999999996 775 32 45 77889999999988 6899999
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHH-HcCCCceEEEeCCCCCHHHHHHHHhcC
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCAR-KASDDLQVLGNGDIYSYLDWNKHKSDC 396 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~-~~~~~IPVIgNGdI~s~eDa~~~l~~~ 396 (540)
...||..+.+++.++++.|++.|+++| +|.+ .+.+|+..+++++ .+ ++||++++.+.+++++.++++.
T Consensus 200 an~~~~~~~~~a~~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~~--~iPI~~dE~~~~~~~~~~~i~~- 268 (401)
T 2hzg_A 200 VGQIFGEDVEAAAARLPTLDAAGVLWL-------EEPF-DAGALAAHAALAGRGA--RVRIAGGEAAHNFHMAQHLMDY- 268 (401)
T ss_dssp CTTTTTTCHHHHHTTHHHHHHTTCSEE-------ECCS-CTTCHHHHHHHHTTCC--SSEEEECTTCSSHHHHHHHHHH-
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCEE-------ECCC-CccCHHHHHHHHhhCC--CCCEEecCCcCCHHHHHHHHHC-
Confidence 998882124678999999999999987 3444 3468999999998 77 7999999999999999999987
Q ss_pred CCcCeeeecHHHHhCCCchHHHHh
Q 009196 397 PELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 397 ~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
..+|.|++-.+.++.++-+.++..
T Consensus 269 ~~~d~v~ik~~~~GGit~~~~i~~ 292 (401)
T 2hzg_A 269 GRIGFIQIDCGRIGGLGPAKRVAD 292 (401)
T ss_dssp SCCSEEEECHHHHTSHHHHHHHHH
T ss_pred CCCCEEEeCcchhCCHHHHHHHHH
Confidence 889999999888888776666643
No 93
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=98.85 E-value=6.2e-08 Score=101.31 Aligned_cols=146 Identities=11% Similarity=-0.021 Sum_probs=122.5
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
.+++.++++|+.+. +.||+.|.|++||+. +| .+.+++...++|++|++++ +++|.|+...||+ ..+
T Consensus 148 ~~~e~~~~~a~~~~-~~Gf~~iKik~g~~~-------~~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~--~~~ 215 (382)
T 1rvk_A 148 ATPEDYGRFAETLV-KRGYKGIKLHTWMPP-------VS--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYS--RTD 215 (382)
T ss_dssp SSHHHHHHHHHHHH-HHTCSEEEEECCCTT-------ST--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCC--HHH
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEEcCCcCc-------cc--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HHH
Confidence 68999999998887 569999999999864 22 3458899999999999988 6899999998884 578
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCC-HHHHHHHHhcCCCcCeeeecHH
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYS-YLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s-~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+.++++.|++.|+++|- |.+ .+.+|+..+++++.+ ++||++.+.+.+ ++++.++++. ..+|.|++--+
T Consensus 216 a~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~~-~~~d~v~ik~~ 284 (382)
T 1rvk_A 216 ALALGRGLEKLGFDWIE-------EPM-DEQSLSSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIKA-GACDILRTGVN 284 (382)
T ss_dssp HHHHHHHHHTTTCSEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHHT-TCCSEEEECHH
T ss_pred HHHHHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHHc-CCCCEEeeCch
Confidence 89999999999999873 444 346899999999998 799999999999 9999999986 88999999877
Q ss_pred HHhCCCchHHHH
Q 009196 408 ALIKPWIFTEIK 419 (540)
Q Consensus 408 aL~nPwif~eik 419 (540)
-++-..-+.++.
T Consensus 285 ~~GGit~~~~i~ 296 (382)
T 1rvk_A 285 DVGGITPALKTM 296 (382)
T ss_dssp HHTSHHHHHHHH
T ss_pred hcCCHHHHHHHH
Confidence 776665555553
No 94
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=98.82 E-value=6.6e-08 Score=100.64 Aligned_cols=146 Identities=10% Similarity=0.081 Sum_probs=120.7
Q ss_pred EEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCC
Q 009196 246 VQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYF 323 (540)
Q Consensus 246 vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~ 323 (540)
.-+.+.+++.++++|+.+.+..||+.|.|++||+ +++...+++++|++++ ++++.|+...+|+
T Consensus 136 ~~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~ 200 (370)
T 1nu5_A 136 WTLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQGWD 200 (370)
T ss_dssp EEECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTTCCC
T ss_pred EEecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 3455578999999998887227999999999884 3567788999999887 5889999988884
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeee
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVM 403 (540)
.+++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+++++++.++++. ..+|.|+
T Consensus 201 --~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ 267 (370)
T 1nu5_A 201 --EQTASIWIPRLEEAGVELVE-------QPV-PRANFGALRRLTEQN--GVAILADESLSSLSSAFELARD-HAVDAFS 267 (370)
T ss_dssp --HHHHHHHHHHHHHHTCCEEE-------CCS-CTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHT-TCCSEEE
T ss_pred --HHHHHHHHHHHHhcCcceEe-------CCC-CcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHh-CCCCEEE
Confidence 57889999999999999873 444 457899999999998 7999999999999999999986 7899999
Q ss_pred ecHHHHhCCCchHHHH
Q 009196 404 IARGALIKPWIFTEIK 419 (540)
Q Consensus 404 IGRgaL~nPwif~eik 419 (540)
+--+-++..+-+.++.
T Consensus 268 ik~~~~GGit~~~~i~ 283 (370)
T 1nu5_A 268 LKLCNMGGIANTLKVA 283 (370)
T ss_dssp ECHHHHTSHHHHHHHH
T ss_pred EchhhcCCHHHHHHHH
Confidence 9877777766555554
No 95
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=98.78 E-value=8e-08 Score=99.90 Aligned_cols=147 Identities=11% Similarity=0.040 Sum_probs=121.9
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+..++.+.+++.+.+.|+.+. +.||+.|.|++||+ +++...++|+++++++ ++++.|+...
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~ 194 (366)
T 1tkk_A 131 ETDYTVSVNSPEEMAADAENYL-KQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQ 194 (366)
T ss_dssp EBCEEECSCCHHHHHHHHHHHH-HHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeeEEecCCCHHHHHHHHHHHH-HcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 4456777789999999988876 56999999998872 4677889999999987 6889999998
Q ss_pred CCCCChhHHHHHHHHHHH--cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 321 GYFEGKNRIDSLIADIGT--WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 321 G~~e~~~~~~~la~~lee--aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
+|+ .+++.++++.|++ .|+++| +|.. .+.+|+..+++++.+ ++||++++.+++++++.++++. ..
T Consensus 195 ~~~--~~~a~~~~~~l~~~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~ 261 (366)
T 1tkk_A 195 GWR--PKEAVTAIRKMEDAGLGIELV-------EQPV-HKDDLAGLKKVTDAT--DTPIMADESVFTPRQAFEVLQT-RS 261 (366)
T ss_dssp CSC--HHHHHHHHHHHHHTTCCEEEE-------ECCS-CTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHH-TC
T ss_pred CCC--HHHHHHHHHHHhhcCCCceEE-------ECCC-CcccHHHHHHHHhhC--CCCEEEcCCCCCHHHHHHHHHh-CC
Confidence 884 5788999999999 888777 3554 457899999999998 7999999999999999999987 78
Q ss_pred cCeeeecHHHHhCCCchHHH
Q 009196 399 LASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~ei 418 (540)
+|.|++--.-++.+.=+.++
T Consensus 262 ~d~v~ik~~~~GGit~~~~i 281 (366)
T 1tkk_A 262 ADLINIKLMKAGGISGAEKI 281 (366)
T ss_dssp CSEEEECHHHHTSHHHHHHH
T ss_pred CCEEEeehhhhcCHHHHHHH
Confidence 99999987776665555444
No 96
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=98.77 E-value=7.5e-08 Score=100.36 Aligned_cols=146 Identities=10% Similarity=0.002 Sum_probs=121.8
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEe
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKV 318 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKi 318 (540)
..|+...+.+.+++.++++|+.+. +.||+.|.|++|+ +++...+++++|++++ ++++.|+.
T Consensus 135 ~vp~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDa 197 (371)
T 2ps2_A 135 RLPLISSIYVGEPEDMRARVAKYR-AKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDA 197 (371)
T ss_dssp CEEBEEEECSCCHHHHHHHHHHHH-TTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEEC
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHH-HhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence 345566777789999999999887 6799999999874 3778889999999988 68999999
Q ss_pred cCCCCCChhHHHHHHHHH-HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC
Q 009196 319 RTGYFEGKNRIDSLIADI-GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP 397 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~l-eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ 397 (540)
..||+ .+++.++++.| ++.|+ +| +|... +|+..+++++.+ ++||++.+.+++++++.++++. .
T Consensus 198 n~~~~--~~~a~~~~~~l~~~~~i-~i-------E~P~~---~~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~-~ 261 (371)
T 2ps2_A 198 NGKLS--VETALRLLRLLPHGLDF-AL-------EAPCA---TWRECISLRRKT--DIPIIYDELATNEMSIVKILAD-D 261 (371)
T ss_dssp TTBCC--HHHHHHHHHHSCTTCCC-EE-------ECCBS---SHHHHHHHHTTC--CSCEEESTTCCSHHHHHHHHHH-T
T ss_pred CCCcC--HHHHHHHHHHHHhhcCC-cC-------cCCcC---CHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHh-C
Confidence 88884 57889999999 99998 66 34332 899999999988 7999999999999999999987 8
Q ss_pred CcCeeeecHHHHhCCCchHHHH
Q 009196 398 ELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 398 gaDgVMIGRgaL~nPwif~eik 419 (540)
.+|.|++-.+-++..+-+.++.
T Consensus 262 ~~d~v~ik~~~~GGit~~~~i~ 283 (371)
T 2ps2_A 262 AAEGIDLKISKAGGLTRGRRQR 283 (371)
T ss_dssp CCSEEEEEHHHHTSHHHHHHHH
T ss_pred CCCEEEechhhcCCHHHHHHHH
Confidence 8999999887777765555543
No 97
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.76 E-value=2e-07 Score=92.34 Aligned_cols=189 Identities=11% Similarity=0.115 Sum_probs=122.1
Q ss_pred HHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccC
Q 009196 207 KVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNK 286 (540)
Q Consensus 207 ~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~ 286 (540)
.+.|++-++-=-+. +...+......+++.-..+.++-+|+.|.- ..+..+.+++ .+|+|-|=||
T Consensus 41 ~~~gad~lhvvDld--~a~~~~~~~~~~i~~i~~~~~~pl~vGGGI-rs~e~~~~~l--~~GadkVii~----------- 104 (243)
T 4gj1_A 41 EKAGAKELHLVDLT--GAKDPSKRQFALIEKLAKEVSVNLQVGGGI-RSKEEVKALL--DCGVKRVVIG----------- 104 (243)
T ss_dssp HHHTCCEEEEEEHH--HHHCGGGCCHHHHHHHHHHCCSEEEEESSC-CCHHHHHHHH--HTTCSEEEEC-----------
T ss_pred HHCCCCEEEEEecC--cccccchhHHHHHHHHHHhcCCCeEecccc-ccHHHHHHHH--HcCCCEEEEc-----------
Confidence 34698855311111 111222222334433333445678988852 2233333444 4699999885
Q ss_pred CccccccCCchHHHHHHHHhccc-ccccEEEEec-------CCCCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCC
Q 009196 287 GAGSCLLTKPMRMKGIIEATSGT-VDKPITIKVR-------TGYFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSK 357 (540)
Q Consensus 287 G~GsaLl~~p~~l~eIv~av~~~-v~iPVtVKiR-------~G~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g 357 (540)
++..++|+++.++.+..-.. +-+-+-+|.+ -||.+. ...+.++++.+++.|+..|.++.-.+.+...|
T Consensus 105 ---t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G 181 (243)
T 4gj1_A 105 ---SMAIKDATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQG 181 (243)
T ss_dssp ---TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----C
T ss_pred ---cccccCCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccC
Confidence 67789999999998877432 2222333322 145442 24678999999999999999999888888887
Q ss_pred CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 358 LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 358 ~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
.|.+.++.+++.++ ++|||++||+.+.+|+.+ +. .+++||.+|++++..-.-+.+++
T Consensus 182 -~d~~l~~~l~~~~~-~ipviasGGv~~~~Dl~~-l~--~~~~gvivg~Al~~g~i~l~ea~ 238 (243)
T 4gj1_A 182 -VNVRLYKLIHEIFP-NICIQASGGVASLKDLEN-LK--GICSGVIVGKALLDGVFSVEEGI 238 (243)
T ss_dssp -CCHHHHHHHHHHCT-TSEEEEESCCCSHHHHHH-TT--TTCSEEEECHHHHTTSSCHHHHH
T ss_pred -CCHHHHHHHHHhcC-CCCEEEEcCCCCHHHHHH-HH--ccCchhehHHHHHCCCCCHHHHH
Confidence 69999999999875 699999999999999988 44 56999999999987766566554
No 98
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=98.75 E-value=1.2e-07 Score=99.88 Aligned_cols=147 Identities=10% Similarity=0.020 Sum_probs=121.6
Q ss_pred CeEEEEe-c-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEE
Q 009196 242 DLFGVQI-C-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIK 317 (540)
Q Consensus 242 ~p~~vQL-~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVK 317 (540)
.|+...+ . +.+++.+++.|+.+. +.||+.|.|++|| +++...++|++|++++ +++|.|+
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~-~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vD 201 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWV-EQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVD 201 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHH-HTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHH-HCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEE
Confidence 5666677 4 688999999998876 5799999999987 4678888999999987 6899999
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHH-HHcCCCceEEEeCCCCCHHHHHHHHhcC
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCA-RKASDDLQVLGNGDIYSYLDWNKHKSDC 396 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~-~~~~~~IPVIgNGdI~s~eDa~~~l~~~ 396 (540)
...||+ ..++.++++.|++.|+++|- |.+ .+.+|+..++++ +.+ ++||++++.+.+++++.++++.
T Consensus 202 an~~~~--~~~A~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~--~iPIa~dE~i~~~~~~~~~i~~- 268 (389)
T 3ozy_A 202 ANQSLG--RHDALAMLRILDEAGCYWFE-------EPL-SIDDIEGHRILRAQGT--PVRIATGENLYTRNAFNDYIRN- 268 (389)
T ss_dssp CTTCCC--HHHHHHHHHHHHHTTCSEEE-------SCS-CTTCHHHHHHHHTTCC--SSEEEECTTCCHHHHHHHHHHT-
T ss_pred CCCCcC--HHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhcCC--CCCEEeCCCCCCHHHHHHHHHc-
Confidence 999995 57899999999999999983 444 346899999999 877 7999999999999999999986
Q ss_pred CCcCeeeecHHHHhCCCchHHH
Q 009196 397 PELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 397 ~gaDgVMIGRgaL~nPwif~ei 418 (540)
..+|.|++--+-++...=+.+|
T Consensus 269 ~~~d~v~ik~~~~GGit~~~~i 290 (389)
T 3ozy_A 269 DAIDVLQADASRAGGITEALAI 290 (389)
T ss_dssp TCCSEECCCTTTSSCHHHHHHH
T ss_pred CCCCEEEeCccccCCHHHHHHH
Confidence 8899999876655554444444
No 99
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=98.74 E-value=9e-08 Score=100.69 Aligned_cols=141 Identities=9% Similarity=0.026 Sum_probs=118.2
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
+.+++.|+++|+.+. +.||+.|.|+.|+. .++...++|++|++++ +++|.|+...||+ .+
T Consensus 147 ~~~~~~~~~~a~~~~-~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~--~~ 208 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFY-GKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPED--LD 208 (391)
T ss_dssp CCCHHHHHHHHHHHH-HTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSC--HH
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCC--HH
Confidence 578999999999887 67999999997731 1588889999999987 6899999998884 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
++.++++.|++.|+++|- |.+ .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++-.+
T Consensus 209 ~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~ 277 (391)
T 2qgy_A 209 QTKSFLKEVSSFNPYWIE-------EPV-DGENISLLTEIKNTF--NMKVVTGEKQSGLVHFRELISR-NAADIFNPDIS 277 (391)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CSS-CTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT-TCCSEECCBTT
T ss_pred HHHHHHHHHHhcCCCeEe-------CCC-ChhhHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHc-CCCCEEEECcc
Confidence 899999999999999873 443 346899999999998 7999999999999999999986 78999999776
Q ss_pred HHhCCCchHHHH
Q 009196 408 ALIKPWIFTEIK 419 (540)
Q Consensus 408 aL~nPwif~eik 419 (540)
.++.++-+.++.
T Consensus 278 ~~GGit~~~~i~ 289 (391)
T 2qgy_A 278 GMGGLIDIIEIS 289 (391)
T ss_dssp TSSCHHHHHHHH
T ss_pred hhCCHHHHHHHH
Confidence 666665555553
No 100
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=98.71 E-value=1.3e-06 Score=86.96 Aligned_cols=207 Identities=10% Similarity=0.046 Sum_probs=134.0
Q ss_pred cccccCcccCCcEEEccCCCCCCH-HHHHHHHHhCCCEEEeccceechhc--cCChhhhhhhhcccCCCeEEEEecC-Cc
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNL-PFRRVCKVLGADVTCGEMAMCTNLL--QGQASEWALLRRHSSEDLFGVQICG-AY 252 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdl-pfR~l~~~~Gadl~~TEmi~a~~l~--~g~~~e~~ll~~~~~e~p~~vQL~G-~~ 252 (540)
+..+++.+|..|+++-- ..|.+. -.+...+.-|+.++..-+=-. .+. .+...-|.++. +.+..+-..-.| .+
T Consensus 10 ~l~i~~~~f~SRl~~Gt-gky~~~~~~~~a~~asg~e~vtva~rR~-~~~~~~~~~~~~~~i~--~~~~~~lpNTag~~t 85 (265)
T 1wv2_A 10 PFVIAGRTYGSRLLVGT-GKYKDLDETRRAIEASGAEIVTVAVRRT-NIGQNPDEPNLLDVIP--PDRYTILPNTAGCYD 85 (265)
T ss_dssp CEEETTEEESCCEEECC-SCSSSHHHHHHHHHHSCCSEEEEEGGGC-CC-------------C--TTTSEEEEECTTCCS
T ss_pred CeEECCEEeecceEEec-CCCCCHHHHHHHHHHhCCCeEEEEEEee-ccccCCCcchHHhhhh--hcCCEECCcCCCCCC
Confidence 46789999999999842 334444 455555667999774322111 111 11122233332 224445555555 57
Q ss_pred HHHHHHHHHHHHH-hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 253 PDTLARTVELIDQ-QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 253 p~~~a~AA~~~~~-~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
.++.++.|+++.+ -.|-++|-|-. ..+. -.|+.|+....+..+.+.+. ++.+..-+- ++ ..
T Consensus 86 a~eAv~~a~lare~~~~~~~iKlEv-------~~d~--~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~~----dd----~~ 147 (265)
T 1wv2_A 86 AVEAVRTCRLARELLDGHNLVKLEV-------LADQ--KTLFPNVVETLKAAEQLVKD-GFDVMVYTS----DD----PI 147 (265)
T ss_dssp HHHHHHHHHHHHTTTTSCCEEEECC-------BSCT--TTCCBCHHHHHHHHHHHHTT-TCEEEEEEC----SC----HH
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEe-------ecCc--cccCcCHHHHHHHHHHHHHC-CCEEEEEeC----CC----HH
Confidence 8999999999984 45778887752 1111 13667777777766666443 333221111 11 57
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
+++++++.|+++|..+|..-.. -.+..+++.|+.+++.. ++|||..|||.+++|+..+++ .|||+|++|.+...
T Consensus 148 ~akrl~~~G~~aVmPlg~pIGs-G~Gi~~~~lI~~I~e~~--~vPVI~eGGI~TPsDAa~Ame--LGAdgVlVgSAI~~ 221 (265)
T 1wv2_A 148 IARQLAEIGCIAVMPLAGLIGS-GLGICNPYNLRIILEEA--KVPVLVDAGVGTASDAAIAME--LGCEAVLMNTAIAH 221 (265)
T ss_dssp HHHHHHHSCCSEEEECSSSTTC-CCCCSCHHHHHHHHHHC--SSCBEEESCCCSHHHHHHHHH--HTCSEEEESHHHHT
T ss_pred HHHHHHHhCCCEEEeCCccCCC-CCCcCCHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHHH--cCCCEEEEChHHhC
Confidence 8999999999999888763211 23556899999999976 799999999999999999998 69999999998853
No 101
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.70 E-value=5.4e-07 Score=85.48 Aligned_cols=193 Identities=11% Similarity=0.067 Sum_probs=122.0
Q ss_pred HHHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCC
Q 009196 200 LPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCP 279 (540)
Q Consensus 200 lpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP 279 (540)
..+..+ ...++|+++..+.+... .| ..-...++......++.+.+.+...+... .+. ..|++.+=+. |
T Consensus 16 ~a~~~~-~~~~~dlvl~D~~~p~~--~g-~~~~~~l~~~~~~~~i~vi~~~~~~~~~~----~~~-~~Ga~~~l~k---p 83 (237)
T 3cwo_X 16 EAVEKY-KELKPDIVTMDITMPEM--NG-IDAIKEIMKIDPNAKIIVCSAMGQQAMVI----EAI-KAGAKDFIVN---T 83 (237)
T ss_dssp TTHHHH-HHHCCSCEEEECCSTTS--SH-HHHHHHHHHHSSSCCEEEECCSSTHHHHH----HHH-HTTCCEEEES---H
T ss_pred HHHHHH-HhcCCCEEEEeCCCCCC--CH-HHHHHHHHHhCCCCCEEEEECCCCHHHHH----HHH-HCCHHheEeC---C
Confidence 344444 34678988877654321 11 11112222233344566666666633332 222 4577664221 1
Q ss_pred CcccccCCccccccCCchHHHHHHHHhccc-cc---------ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecc
Q 009196 280 IDIVVNKGAGSCLLTKPMRMKGIIEATSGT-VD---------KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGR 349 (540)
Q Consensus 280 ~~~v~~~G~GsaLl~~p~~l~eIv~av~~~-v~---------iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgR 349 (540)
.....++++..+.+.+... .- -.+.+....|.........++++.+...|+..|.++++
T Consensus 84 -----------~~~~~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~~~~~~~vli~~~ 152 (237)
T 3cwo_X 84 -----------AAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSI 152 (237)
T ss_dssp -----------HHHHCTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEET
T ss_pred -----------cccChHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHhhcCCCeEEEEec
Confidence 0012344555555444322 10 02344444443323346788899999999999999987
Q ss_pred cccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 350 TRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 350 tr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+..+...+.. ++.+.+++... ++|||+.|++.+++++.+++. .|||+|++|++++.+||.+.++++
T Consensus 153 ~~~g~~~g~~-~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~--~G~~~~~vg~a~~~~~~~~~~~~~ 218 (237)
T 3cwo_X 153 DRDGTKSGYD-TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFL--AGADAALAASVFHFREIDVRELKE 218 (237)
T ss_dssp TTTTCCSCCC-HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHH--HTCSEEEESHHHHTTSSCHHHHHH
T ss_pred CCCCcccccc-HHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHH--cCcHHHhhhHHHHcCCCCHHHHHH
Confidence 6556666644 89999999887 799999999999999999886 699999999999999999999875
No 102
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=98.70 E-value=1.6e-07 Score=99.15 Aligned_cols=140 Identities=13% Similarity=0.100 Sum_probs=113.3
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecC------CCCCc-ccccCCcccccc-CCchHHHHHHHHhcccc--cccEEEEecCC
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINM------GCPID-IVVNKGAGSCLL-TKPMRMKGIIEATSGTV--DKPITIKVRTG 321 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~------GCP~~-~v~~~G~GsaLl-~~p~~l~eIv~av~~~v--~iPVtVKiR~G 321 (540)
+++.|+++|+.+. +.||+.|.|+. |++.. ...++.+|+.+. ++++...++|++|++++ +++|.|....+
T Consensus 150 ~~~~~~~~a~~~~-~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~ 228 (410)
T 2gl5_A 150 TPEEYAEAARAAL-DDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSL 228 (410)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 8999999999887 67999999996 66211 111235666553 57788999999999987 68899998888
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCe
Q 009196 322 YFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 322 ~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDg 401 (540)
|+ .+++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.
T Consensus 229 ~~--~~~ai~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~ 295 (410)
T 2gl5_A 229 LG--TNSAIQFAKAIEKYRIFLYE-------EPI-HPLNSDNMQKVSRST--TIPIATGERSYTRWGYRELLEK-QSIAV 295 (410)
T ss_dssp SC--HHHHHHHHHHHGGGCEEEEE-------CSS-CSSCHHHHHHHHHHC--SSCEEECTTCCTTHHHHHHHHT-TCCSE
T ss_pred CC--HHHHHHHHHHHHhcCCCeEE-------CCC-ChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc-CCCCE
Confidence 84 57889999999999988763 333 346899999999998 7999999999999999999986 78999
Q ss_pred eeec
Q 009196 402 CMIA 405 (540)
Q Consensus 402 VMIG 405 (540)
|++=
T Consensus 296 v~ik 299 (410)
T 2gl5_A 296 AQPD 299 (410)
T ss_dssp ECCC
T ss_pred EecC
Confidence 9873
No 103
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.67 E-value=3.4e-08 Score=96.89 Aligned_cols=90 Identities=13% Similarity=0.092 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.+..++++.++++|+++|+++..+.... ....+++.++++++.+ ++||+++|+|.+++++.++++ .|||+|++|+
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~--~Gad~V~lg~ 104 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELIL--RGADKVSINT 104 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHH--TTCSEEEESH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHH--cCCCEEEECh
Confidence 4678899999999999999997764322 2235688899999887 799999999999999999887 6899999999
Q ss_pred HHHhCCCchHHHHhc
Q 009196 407 GALIKPWIFTEIKEQ 421 (540)
Q Consensus 407 gaL~nPwif~eik~~ 421 (540)
.++.+|+++.++.+.
T Consensus 105 ~~l~~p~~~~~~~~~ 119 (253)
T 1thf_D 105 AAVENPSLITQIAQT 119 (253)
T ss_dssp HHHHCTHHHHHHHHH
T ss_pred HHHhChHHHHHHHHH
Confidence 999999998887653
No 104
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.66 E-value=2.5e-07 Score=93.50 Aligned_cols=154 Identities=14% Similarity=0.180 Sum_probs=99.6
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT 320 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~ 320 (540)
..++++-+.+ .+.|+.+. ++|+++|+++.++|.+... ..|+.+++.++.+ +.+++.+++|+.++++.
T Consensus 21 ~~~~i~~~~~------~~~a~~~~-~~Ga~~i~~~e~v~~~~~~--~~G~~~~~~~~~i----~~i~~~~~~Pvi~~~~~ 87 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAE-EAGAVAVMALERVPADIRA--QGGVARMSDPKII----KEIMAAVSIPVMAKVRI 87 (297)
T ss_dssp TTEEEEEESS------HHHHHHHH-HHTCSEEEECSSCHHHHHH--TTCCCCCCCHHHH----HHHHTTCSSCEEEEEET
T ss_pred hCCeeeeech------HHHHHHHH-HCCCcEEEeccccchHHHh--hcCCccCCCHHHH----HHHHHhcCCCeEEEecc
Confidence 3467666554 34455554 5699999998766654222 2355666676554 45566678999888765
Q ss_pred CCC-----------------------C---C-------------hhHHHHHHHHHHHcCCcEEEEecc------------
Q 009196 321 GYF-----------------------E---G-------------KNRIDSLIADIGTWGASAVTVHGR------------ 349 (540)
Q Consensus 321 G~~-----------------------e---~-------------~~~~~~la~~leeaGvdaItVHgR------------ 349 (540)
++. + . ..+..+ +..+.++|++.|++||-
T Consensus 88 ~~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~-~~~a~~~Gad~I~v~G~~~~g~~~e~~~~ 166 (297)
T 2zbt_A 88 GHFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGE-ALRRIAEGAAMIRTKGEAGTGNVVEAVRH 166 (297)
T ss_dssp TCHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHH-HHHHHHTTCSEEEECCCSSSCCTHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHH-HHHHHHcCCCEEEEcccccCcchHHHHhh
Confidence 420 0 0 011112 23345667777766631
Q ss_pred --------------cccCcc----CCCcCHHHHHHHHHHcCCCceEE--EeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 350 --------------TRQQRY----SKLADWDYIYQCARKASDDLQVL--GNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 350 --------------tr~q~y----~g~adw~~I~~i~~~~~~~IPVI--gNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
+....+ ..+.+++.++++++.+ ++||+ +.|||.+++++.+++. .|||+|+||++++
T Consensus 167 ~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~~a~GGI~~~e~i~~~~~--aGadgvvvGsai~ 242 (297)
T 2zbt_A 167 ARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHG--RLPVVNFAAGGIATPADAALMMH--LGMDGVFVGSGIF 242 (297)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHS--SCSSCEEBCSSCCSHHHHHHHHH--TTCSEEEECGGGG
T ss_pred HHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhc--CCCcEEEeeCCCCCHHHHHHHHH--cCCCEEEEchHHh
Confidence 001100 1235688899999887 68988 9999999999999886 6999999999998
Q ss_pred hCC
Q 009196 410 IKP 412 (540)
Q Consensus 410 ~nP 412 (540)
..+
T Consensus 243 ~~~ 245 (297)
T 2zbt_A 243 KSG 245 (297)
T ss_dssp GSS
T ss_pred CCC
Confidence 644
No 105
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.65 E-value=1e-07 Score=100.22 Aligned_cols=141 Identities=11% Similarity=0.028 Sum_probs=114.8
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc--ccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCC
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPID--IVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEG 325 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~--~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~ 325 (540)
+.+++.|+++|+.+. +.||+.|.|+.||+.. ......||+....+++...++|++|++++ +++|.|....+|+
T Consensus 135 ~~~~~~~~~~a~~~~-~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~-- 211 (392)
T 2poz_A 135 ADTPDEFARAVERPL-KEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLT-- 211 (392)
T ss_dssp CCSHHHHHHHTHHHH-HTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC--
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCC--
Confidence 358999999998887 6799999999997531 00012355555678888999999999987 6889999888884
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.+++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++
T Consensus 212 ~~~a~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~i 279 (392)
T 2poz_A 212 TDETIRFCRKIGELDICFVE-------EPC-DPFDNGALKVISEQI--PLPIAVGERVYTRFGFRKIFEL-QACGIIQP 279 (392)
T ss_dssp HHHHHHHHHHHGGGCEEEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHTT-TCCSEECC
T ss_pred HHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc-CCCCEEec
Confidence 57889999999999988763 333 346899999999998 7999999999999999999986 78999987
No 106
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=98.65 E-value=1.8e-07 Score=89.02 Aligned_cols=139 Identities=9% Similarity=0.071 Sum_probs=91.9
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCC
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTG 321 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G 321 (540)
.|+++.|.+.+++.+.+.++.+. ++|++.|+++++||.. .++++.+++.++..+.+...+
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~-~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~~- 69 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVF-EGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAGT- 69 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHH-HTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEES-
T ss_pred CCEEEEEecCCHHHHHHHHHHHH-HCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEecc-
Confidence 46888999999999999999887 6899999999988732 234455554432112222211
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEEecccc--------------------cC-------------c-c-CCCcCHHHHHH
Q 009196 322 YFEGKNRIDSLIADIGTWGASAVTVHGRTR--------------------QQ-------------R-Y-SKLADWDYIYQ 366 (540)
Q Consensus 322 ~~e~~~~~~~la~~leeaGvdaItVHgRtr--------------------~q-------------~-y-~g~adw~~I~~ 366 (540)
-.+. +-+..+.++|+|+| +++... .+ . + .....++++++
T Consensus 70 -v~~~----~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~ 143 (205)
T 1wa3_A 70 -VTSV----EQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKA 143 (205)
T ss_dssp -CCSH----HHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHH
T ss_pred -cCCH----HHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHH
Confidence 0111 12344555666666 544321 00 0 0 00123567788
Q ss_pred HHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 367 CARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 367 i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
+++.++ ++||++.|||. .+++.+++. .|||+|.+|++++.
T Consensus 144 l~~~~~-~~pvia~GGI~-~~~~~~~~~--~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 144 MKGPFP-NVKFVPTGGVN-LDNVCEWFK--AGVLAVGVGSALVK 183 (205)
T ss_dssp HHTTCT-TCEEEEBSSCC-TTTHHHHHH--HTCSCEEECHHHHC
T ss_pred HHHhCC-CCcEEEcCCCC-HHHHHHHHH--CCCCEEEECccccC
Confidence 887775 69999999995 889999887 69999999999987
No 107
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.64 E-value=5.8e-07 Score=88.05 Aligned_cols=160 Identities=11% Similarity=0.070 Sum_probs=112.9
Q ss_pred CCeEEEEecCCcH--HHHHHHHHHHHHhCCCCEEEec--CCCCCcccccCCc--c----cccc--CCchHHHHHHHHhcc
Q 009196 241 EDLFGVQICGAYP--DTLARTVELIDQQCTVDFIDIN--MGCPIDIVVNKGA--G----SCLL--TKPMRMKGIIEATSG 308 (540)
Q Consensus 241 e~p~~vQL~G~~p--~~~a~AA~~~~~~aG~D~IDIN--~GCP~~~v~~~G~--G----saLl--~~p~~l~eIv~av~~ 308 (540)
+..++..|.+.+| +.+.+.++.+. ++ +|.|+|+ ++||.- +|. + .+|. .+.....++++.+++
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~-~~-ad~iel~~p~sdp~~----DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~ 77 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALD-EY-AGAIELGIPFSDPIA----DGKTIQESHYRALKNGFKLREAFWIVKEFRR 77 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHG-GG-BSCEEEECCCSCCTT----SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHT
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHH-Hc-CCEEEECCCCCCCCC----CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHh
Confidence 3468889999888 58999999887 66 9999998 677753 120 0 0000 156777899999999
Q ss_pred cccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecc-------c-------------------c-----------
Q 009196 309 TVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGR-------T-------------------R----------- 351 (540)
Q Consensus 309 ~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgR-------t-------------------r----------- 351 (540)
.+++||.+.+.... -......++++.+.++|++.|++|.- . .
T Consensus 78 ~~~~pv~~~~~~~~-~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~ 156 (248)
T 1geq_A 78 HSSTPIVLMTYYNP-IYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMT 156 (248)
T ss_dssp TCCCCEEEEECHHH-HHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred hCCCCEEEEeccch-hhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcC
Confidence 88899888653210 00011257788888999999998841 0 0
Q ss_pred c--------CccCCC------cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 352 Q--------QRYSKL------ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 352 ~--------q~y~g~------adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
. .++++. ..+++++++++.+ ++||++.|||.+++++.+++. .|||+|.+|++++..
T Consensus 157 d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~--~~pi~~~GGI~~~e~i~~~~~--~Gad~vivGsai~~~ 226 (248)
T 1geq_A 157 TGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRIC--RNKVAVGFGVSKREHVVSLLK--EGANGVVVGSALVKI 226 (248)
T ss_dssp SSEEEEECCC-------CCCHHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHH--TTCSEEEECHHHHHH
T ss_pred CCeEEEEECCccCCCCCCCChhHHHHHHHHHhhc--CCCEEEEeecCCHHHHHHHHH--cCCCEEEEcHHHHhh
Confidence 0 001121 1366888999887 799999999999999999776 799999999998754
No 108
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.61 E-value=5.2e-08 Score=95.55 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
..+..++++.++++|+++|.++..+.... ....+++.++++++.+ ++||+++|+|.+.+++.+++. .|||+|++|
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~--~Gad~V~lg 104 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISATHE-ERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLL--SGADKVSVN 104 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSSTT-CHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHH--HTCSEEEEC
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCcccc-CccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHH--cCCCEEEEC
Confidence 34678999999999999999997654322 2235688899999887 799999999999999999887 589999999
Q ss_pred HHHHhCCCchHHHHhc
Q 009196 406 RGALIKPWIFTEIKEQ 421 (540)
Q Consensus 406 RgaL~nPwif~eik~~ 421 (540)
+.++.+|+++.++.+.
T Consensus 105 ~~~l~~p~~~~~~~~~ 120 (252)
T 1ka9_F 105 SAAVRRPELIRELADH 120 (252)
T ss_dssp HHHHHCTHHHHHHHHH
T ss_pred hHHHhCcHHHHHHHHH
Confidence 9999999999888654
No 109
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.60 E-value=3.2e-07 Score=96.66 Aligned_cols=141 Identities=12% Similarity=0.028 Sum_probs=112.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecC------CCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCC
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINM------GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYF 323 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~------GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~ 323 (540)
+++.|+++|+.+. +.||+.|.|+. |++... ...|....++++...++|++|++++ +++|.|....+|+
T Consensus 146 ~~e~~~~~a~~~~-~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~ 221 (403)
T 2ox4_A 146 RKEEYAEEALKAV-AEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTD 221 (403)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 8999999999887 57999999996 665222 2223333456688889999999987 6889999888884
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeee
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVM 403 (540)
.+++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|+
T Consensus 222 --~~~ai~~~~~l~~~~i~~iE-------~P~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ 288 (403)
T 2ox4_A 222 --LVSAIQFAKAIEEFNIFFYE-------EIN-TPLNPRLLKEAKKKI--DIPLASGERIYSRWGFLPFLED-RSIDVIQ 288 (403)
T ss_dssp --HHHHHHHHHHHGGGCEEEEE-------CCS-CTTSTHHHHHHHHTC--CSCEEECTTCCHHHHHHHHHHT-TCCSEEC
T ss_pred --HHHHHHHHHHHHhhCCCEEe-------CCC-ChhhHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHc-CCCCEEe
Confidence 57889999999999988763 433 346899999999988 7999999999999999999986 7899999
Q ss_pred ecHHHH
Q 009196 404 IARGAL 409 (540)
Q Consensus 404 IGRgaL 409 (540)
+--.-+
T Consensus 289 ik~~~~ 294 (403)
T 2ox4_A 289 PDLGTC 294 (403)
T ss_dssp CCHHHH
T ss_pred cCcccc
Confidence 854433
No 110
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.59 E-value=1.5e-06 Score=91.39 Aligned_cols=125 Identities=10% Similarity=-0.026 Sum_probs=106.2
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
+++.++++|+.+. +.||+.|.|++|+ .+++...++|++|++++ +++|.|....||+ .+++
T Consensus 145 ~~~~~~~~a~~~~-~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~--~~~a 206 (389)
T 2oz8_A 145 DDDAFVSLFSHAA-SIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWT--SKEA 206 (389)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBC--HHHH
T ss_pred CHHHHHHHHHHHH-HhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCC--HHHH
Confidence 7999999998887 6799999999887 24577889999999988 6889999888884 5788
Q ss_pred HHHHHHHHH--cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGT--WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~lee--aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
.++++.|++ .|+.+| +|.. .+.+|+..+++++.++ ++||++.+.+ +++++.++++. ..+|.|++.
T Consensus 207 ~~~~~~l~~~g~~i~~i-------EqP~-~~~~~~~~~~l~~~~~-~iPIa~dE~~-~~~~~~~~i~~-~~~d~v~ik 273 (389)
T 2oz8_A 207 LTKLVAIREAGHDLLWV-------EDPI-LRHDHDGLRTLRHAVT-WTQINSGEYL-DLQGKRLLLEA-HAADILNVH 273 (389)
T ss_dssp HHHHHHHHHTTCCCSEE-------ESCB-CTTCHHHHHHHHHHCC-SSEEEECTTC-CHHHHHHHHHT-TCCSEEEEC
T ss_pred HHHHHHHHhcCCCceEE-------eCCC-CCcCHHHHHHHHhhCC-CCCEEeCCCC-CHHHHHHHHHc-CCCCEEEEC
Confidence 999999999 777765 3444 3468999999999873 4999999999 99999999986 789999998
No 111
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.58 E-value=4.2e-07 Score=95.62 Aligned_cols=131 Identities=8% Similarity=-0.017 Sum_probs=110.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
+++.|+++|+.+. +.||+.|.|++|- .+++...++|++|++++ +++|.|....||+ .+++
T Consensus 162 ~~e~~~~~a~~~~-~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~--~~~a 223 (393)
T 2og9_A 162 PIDQLMVNASASI-ERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWD--RPTA 223 (393)
T ss_dssp CHHHHHHHHHHHH-HTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCC--HHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCC--HHHH
Confidence 8999999999887 6799999998762 24788889999999987 6899999888884 5789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++--.-.
T Consensus 224 ~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~ 292 (393)
T 2og9_A 224 QRMCRIFEPFNLVWIE-------EPL-DAYDHEGHAALALQF--DTPIATGEMLTSAAEHGDLIRH-RAADYLMPDAPRV 292 (393)
T ss_dssp HHHHHHHGGGCCSCEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT-TCCSEECCCHHHH
T ss_pred HHHHHHHHhhCCCEEE-------CCC-CcccHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHC-CCCCEEeeCcccc
Confidence 9999999999999873 433 346899999999998 7999999999999999999986 7899999865544
Q ss_pred hC
Q 009196 410 IK 411 (540)
Q Consensus 410 ~n 411 (540)
+-
T Consensus 293 GG 294 (393)
T 2og9_A 293 GG 294 (393)
T ss_dssp TS
T ss_pred CC
Confidence 43
No 112
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.53 E-value=8.4e-07 Score=93.55 Aligned_cols=130 Identities=8% Similarity=0.023 Sum_probs=109.7
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
+++.|.++|+.+. +.||+.|.|+.|. .+++...++|++|++++ +++|.|....+|+ .+++
T Consensus 175 ~~e~~~~~a~~~~-~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~--~~~a 236 (398)
T 2pp0_A 175 PLDQVLKNVVISR-ENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWD--RETA 236 (398)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSC--HHHH
T ss_pred CHHHHHHHHHHHH-HhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCC--HHHH
Confidence 7999999998887 6799999998763 25788889999999987 6899999988884 5788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++--.-+
T Consensus 237 i~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik~~~~ 305 (398)
T 2pp0_A 237 IRMGRKMEQFNLIWIE-------EPL-DAYDIEGHAQLAAAL--DTPIATGEMLTSFREHEQLILG-NASDFVQPDAPRV 305 (398)
T ss_dssp HHHHHHHGGGTCSCEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT-TCCSEECCCHHHH
T ss_pred HHHHHHHHHcCCceee-------CCC-ChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc-CCCCEEEeCcccc
Confidence 9999999999999873 443 346899999999998 7999999999999999999986 7899999854443
Q ss_pred h
Q 009196 410 I 410 (540)
Q Consensus 410 ~ 410 (540)
+
T Consensus 306 G 306 (398)
T 2pp0_A 306 G 306 (398)
T ss_dssp T
T ss_pred C
Confidence 3
No 113
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.52 E-value=1.6e-07 Score=90.99 Aligned_cols=90 Identities=13% Similarity=0.111 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.+..++++.++++|+++|+++...... +.....++.++++++.+ ++||+++|+|.+++++.++++ .|||+|++++
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~--~Gad~V~i~~ 107 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFR--AGADKVSVNT 107 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHH--HTCSEEEESH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH--cCCCEEEECh
Confidence 357889999999999999999765432 22234688899999988 799999999999999988776 6899999999
Q ss_pred HHHhCCCchHHHHhc
Q 009196 407 GALIKPWIFTEIKEQ 421 (540)
Q Consensus 407 gaL~nPwif~eik~~ 421 (540)
.++.+|+++.++.+.
T Consensus 108 ~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 108 AAVRNPQLVALLARE 122 (253)
T ss_dssp HHHHCTHHHHHHHHH
T ss_pred HHhhCcHHHHHHHHH
Confidence 999999998887543
No 114
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.52 E-value=9.7e-07 Score=93.30 Aligned_cols=135 Identities=10% Similarity=0.103 Sum_probs=111.2
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecC----CCCCcccccCCcccccc--CCchHHHHHHHHhcccc--cccEEEEecCCCC
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINM----GCPIDIVVNKGAGSCLL--TKPMRMKGIIEATSGTV--DKPITIKVRTGYF 323 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~----GCP~~~v~~~G~GsaLl--~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~ 323 (540)
+++.++++|+.+. +.||+.|.|+. |+.... +|+.+. ++++...++|++|++++ +++|.|...-+|
T Consensus 149 ~~~~~~~~a~~~~-~~Gf~~vKik~~~~~G~~~~~-----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~- 221 (410)
T 2qq6_A 149 SNEEYIAVAREAV-ERGFDAIKLDVDDITGPLHRD-----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRF- 221 (410)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEEECCCSSSTTCSC-----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCC-
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeeccccCCcccCC-----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCC-
Confidence 7899999998887 67999999998 654321 455554 47788899999999987 578888888787
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeee
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVM 403 (540)
+.+++.++++.|++.|+++|- +.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|+
T Consensus 222 -~~~~a~~~~~~l~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ 289 (410)
T 2qq6_A 222 -DIPSSIRFARAMEPFGLLWLE-------EPT-PPENLDALAEVRRST--STPICAGENVYTRFDFRELFAK-RAVDYVM 289 (410)
T ss_dssp -CHHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHT-TCCSEEC
T ss_pred -CHHHHHHHHHHHhhcCCCeEE-------CCC-ChhhHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHc-CCCCEEe
Confidence 457889999999999999874 332 346899999999988 7999999999999999999986 7899998
Q ss_pred ec
Q 009196 404 IA 405 (540)
Q Consensus 404 IG 405 (540)
+=
T Consensus 290 ik 291 (410)
T 2qq6_A 290 PD 291 (410)
T ss_dssp CB
T ss_pred cC
Confidence 73
No 115
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.51 E-value=1.5e-06 Score=92.90 Aligned_cols=153 Identities=10% Similarity=0.030 Sum_probs=122.5
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
.+++.+++.|+.+. +.||..|-|+.|||.... .|. .....+++...++|++||+++ +++|.|....+|+ ..+
T Consensus 145 ~~~e~~~~~a~~~~-~~Gf~~iKlk~g~~~~~~--~G~-~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t--~~~ 218 (433)
T 3rcy_A 145 TSADMAAESAADCV-ARGYTAVKFDPAGPYTLR--GGH-MPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFT--TAG 218 (433)
T ss_dssp TCHHHHHHHHHHHH-HTTCSEEEECCSCCCBTT--CCB-CCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBC--HHH
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEcCCCCcccc--cCC-CcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCC--HHH
Confidence 68999999998876 569999999999997532 121 122345677889999999987 5789998888884 578
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
+..+++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++--+-
T Consensus 219 A~~~~~~Le~~~i~~iE-------eP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-g~~D~v~~d~~~ 287 (433)
T 3rcy_A 219 AIRLGQAIEPYSPLWYE-------EPV-PPDNVGAMAQVARAV--RIPVATGERLTTKAEFAPVLRE-GAAAILQPALGR 287 (433)
T ss_dssp HHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHS--SSCEEECTTCCSHHHHHHHHHT-TCCSEECCCHHH
T ss_pred HHHHHHHhhhcCCCEEE-------CCC-ChhhHHHHHHHHhcc--CCCEEecCCCCCHHHHHHHHHc-CCCCEEEeCchh
Confidence 99999999999999884 332 345899999999998 7999999999999999999986 789999988776
Q ss_pred HhCCCchHHHHh
Q 009196 409 LIKPWIFTEIKE 420 (540)
Q Consensus 409 L~nPwif~eik~ 420 (540)
.+-..=+.+|..
T Consensus 288 ~GGit~~~kia~ 299 (433)
T 3rcy_A 288 AGGIWEMKKVAA 299 (433)
T ss_dssp HTHHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 666555555543
No 116
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.51 E-value=1e-06 Score=92.81 Aligned_cols=137 Identities=13% Similarity=-0.001 Sum_probs=109.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecC------CCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCC
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINM------GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYF 323 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~------GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~ 323 (540)
++++|+++|+.+. +.||+.|.|+. |++.. ....|....++++...++|++|++++ +++|.|....+|+
T Consensus 152 ~~~~~~~~a~~~~-~~Gf~~vKik~~~~~~~G~~~~---s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~ 227 (407)
T 2o56_A 152 EPEQYAQAALTAV-SEGYDAIKVDTVAMDRHGNWNQ---QNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTD 227 (407)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEECCSSBCTTSCBSC---SCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEcccccCCcCcccc---CcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCC
Confidence 8999999999887 67999999996 55311 11222222346678889999999987 5889998888884
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeee
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVM 403 (540)
.+++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|+
T Consensus 228 --~~~a~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ 294 (407)
T 2o56_A 228 --TTSAIQFGRMIEELGIFYYE-------EPV-MPLNPAQMKQVADKV--NIPLAAGERIYWRWGYRPFLEN-GSLSVIQ 294 (407)
T ss_dssp --HHHHHHHHHHHGGGCCSCEE-------CSS-CSSSHHHHHHHHHHC--CSCEEECTTCCHHHHHHHHHHT-TCCSEEC
T ss_pred --HHHHHHHHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHc-CCCCEEe
Confidence 57899999999999999873 333 346899999999998 7999999999999999999986 7899998
Q ss_pred ec
Q 009196 404 IA 405 (540)
Q Consensus 404 IG 405 (540)
+=
T Consensus 295 ik 296 (407)
T 2o56_A 295 PD 296 (407)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 117
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.51 E-value=6.4e-07 Score=94.30 Aligned_cols=139 Identities=12% Similarity=0.120 Sum_probs=113.0
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+...+...+++.|.++|+.+. +.||+.|.|+.|+ +++...++|++|++++ +++|.|....
T Consensus 136 p~~~~~g~~~~e~~~~~a~~~~-~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~ 198 (397)
T 2qde_A 136 PLGLVLGAGEPEAVAEEALAVL-REGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDING 198 (397)
T ss_dssp EBCEECCCSCHHHHHHHHHHHH-HHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTT
T ss_pred ceEEECCCCCHHHHHHHHHHHH-HhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 3333443368999999998887 5699999999873 4577889999999987 6899999888
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
||+ .+++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|
T Consensus 199 ~~~--~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d 265 (397)
T 2qde_A 199 AWT--YDQALTTIRALEKYNLSKIE-------QPL-PAWDLDGMARLRGKV--ATPIYADESAQELHDLLAIINK-GAAD 265 (397)
T ss_dssp CCC--HHHHHHHHHHHGGGCCSCEE-------CCS-CTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHH-TCCS
T ss_pred CCC--HHHHHHHHHHHHhCCCCEEE-------CCC-ChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHc-CCCC
Confidence 884 57889999999999999873 433 346899999999988 7999999999999999999987 7899
Q ss_pred eeeecHHHHhC
Q 009196 401 SCMIARGALIK 411 (540)
Q Consensus 401 gVMIGRgaL~n 411 (540)
.|++=-.-++-
T Consensus 266 ~v~ik~~~~GG 276 (397)
T 2qde_A 266 GLMIKTQKAGG 276 (397)
T ss_dssp EEEECHHHHTS
T ss_pred EEEEeccccCC
Confidence 99986554444
No 118
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.49 E-value=3.1e-07 Score=89.60 Aligned_cols=87 Identities=14% Similarity=0.029 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+..++++.++++|+++|+|+..+.... ..... +.++++++.+ ++||+++|+|.+++++..++. .|||+|++|++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~~~~~~l~--~Gad~V~lg~~ 105 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG-RGSNH-ELLAEVVGKL--DVQVELSGGIRDDESLAAALA--TGCARVNVGTA 105 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT-SCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHH--TTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc-CCChH-HHHHHHHHhc--CCcEEEECCCCCHHHHHHHHH--cCCCEEEECch
Confidence 578899999999999999997654321 23345 8899999988 799999999999999999887 79999999999
Q ss_pred HHhCCCchHHHHh
Q 009196 408 ALIKPWIFTEIKE 420 (540)
Q Consensus 408 aL~nPwif~eik~ 420 (540)
++.+|+++.++.+
T Consensus 106 ~l~~p~~~~~~~~ 118 (244)
T 2y88_A 106 ALENPQWCARVIG 118 (244)
T ss_dssp HHHCHHHHHHHHH
T ss_pred HhhChHHHHHHHH
Confidence 9999998888754
No 119
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.48 E-value=2.2e-06 Score=84.98 Aligned_cols=157 Identities=14% Similarity=0.133 Sum_probs=101.6
Q ss_pred CCeEEEEecCCcH--HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCC------cccccc--CCchHHHHHHHHhcccc
Q 009196 241 EDLFGVQICGAYP--DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKG------AGSCLL--TKPMRMKGIIEATSGTV 310 (540)
Q Consensus 241 e~p~~vQL~G~~p--~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G------~GsaLl--~~p~~l~eIv~av~~~v 310 (540)
+..++.-|...+| +.+.+.++.+. ++|+|.|+|+.-|+-+.. +| .-.+|. -+++...++++++++.+
T Consensus 17 ~~~~~~~i~~g~~~~~~~~~~~~~l~-~~Gad~ielg~p~~dp~~--dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~ 93 (262)
T 1rd5_A 17 KTAFIPYITAGDPDLATTAEALRLLD-GCGADVIELGVPCSDPYI--DGPIIQASVARALASGTTMDAVLEMLREVTPEL 93 (262)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEECCCSCCTT--SCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHH-HcCCCEEEECCCCCCccc--CCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 4456667766666 88888888887 789999999865542211 11 000001 26788899999999988
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEec--------------------------ccc-------------
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHG--------------------------RTR------------- 351 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHg--------------------------Rtr------------- 351 (540)
++||.+-.+... .....+..+.++|++.|++|. .+.
T Consensus 94 ~~Pv~~m~~~~~-----~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g 168 (262)
T 1rd5_A 94 SCPVVLLSYYKP-----IMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEG 168 (262)
T ss_dssp SSCEEEECCSHH-----HHSCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCS
T ss_pred CCCEEEEecCcH-----HHHHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCC
Confidence 999987533210 000001124445555554432 110
Q ss_pred ------cCccCCC------cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 352 ------QQRYSKL------ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 352 ------~q~y~g~------adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
..+++|. ...+.++++++.+ ++||++.|||.|++++.+++. .|||+|.||++++
T Consensus 169 ~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~--~GAdgvvVGSai~ 234 (262)
T 1rd5_A 169 FVYLVSVNGVTGPRANVNPRVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQ--WGADGVIIGSAMV 234 (262)
T ss_dssp CEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHH--TTCSEEEECHHHH
T ss_pred eEEEecCCCCCCCCcCCCchHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHH--cCCCEEEEChHHH
Confidence 0111222 1346889999887 799999999999999999776 7999999999865
No 120
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.48 E-value=1.6e-06 Score=92.06 Aligned_cols=153 Identities=7% Similarity=0.014 Sum_probs=121.5
Q ss_pred CeEEEE-ecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEe
Q 009196 242 DLFGVQ-ICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKV 318 (540)
Q Consensus 242 ~p~~vQ-L~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKi 318 (540)
.|+... +...+++.++++|+.+. +.||+.|.|++|++-. + |+ .+++...++|++||+++ +++|.|..
T Consensus 168 v~~y~s~~~~~~~e~~~~~a~~~~-~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vDa 237 (412)
T 3stp_A 168 IPVYYSKLYAGSIEAMQKEAEEAM-KGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLEC 237 (412)
T ss_dssp EEEEEECCCSCCHHHHHHHHHHHH-TTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEEEEecCCCCHHHHHHHHHHHH-HcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 344444 34568999999999887 6799999999998521 1 22 45678889999999988 68999999
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
..+|+ ..++.++++.|++.|+++|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..
T Consensus 238 N~~~~--~~~Ai~~~~~Le~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~li~~-~a 304 (412)
T 3stp_A 238 YMGWN--LDYAKRMLPKLAPYEPRWLE-------EPV-IADDVAGYAELNAMN--IVPISGGEHEFSVIGCAELINR-KA 304 (412)
T ss_dssp TTCSC--HHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHT-TC
T ss_pred CCCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhCC--CCCEEeCCCCCCHHHHHHHHHc-CC
Confidence 98984 67899999999999999884 433 345899999999988 7999999999999999999986 78
Q ss_pred cCeeeecHHHHhCCCchHH
Q 009196 399 LASCMIARGALIKPWIFTE 417 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~e 417 (540)
+|.|++--+-++-..=+.+
T Consensus 305 ~D~v~ik~~~~GGit~a~k 323 (412)
T 3stp_A 305 VSVLQYDTNRVGGITAAQK 323 (412)
T ss_dssp CSEECCCHHHHTHHHHHHH
T ss_pred CCEEecChhhcCCHHHHHH
Confidence 9999987666554333333
No 121
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.45 E-value=1.1e-06 Score=92.13 Aligned_cols=125 Identities=12% Similarity=0.054 Sum_probs=106.2
Q ss_pred CcH---HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCC
Q 009196 251 AYP---DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEG 325 (540)
Q Consensus 251 ~~p---~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~ 325 (540)
.++ +.++++|+.+. +.||+.|.|+.|+ .+++...++|++|++++ ++++.|....||+
T Consensus 135 ~~~~~~e~~~~~a~~~~-~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~-- 196 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQL-KKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMILDANQSYD-- 196 (382)
T ss_dssp SSTTHHHHHHHHHHHHH-TTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCC--
T ss_pred CCcccHHHHHHHHHHHH-HcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCC--
Confidence 578 99999998887 6799999999876 24678889999999987 6889999888884
Q ss_pred hhHHHHHHHHHHHc-CCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 326 KNRIDSLIADIGTW-GASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 326 ~~~~~~la~~leea-GvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.+++.++++.|++. |+++| +|.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++
T Consensus 197 ~~~a~~~~~~l~~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~i 265 (382)
T 2gdq_A 197 AAAAFKWERYFSEWTNIGWL-------EEPL-PFDQPQDYAMLRSRL--SVPVAGGENMKGPAQYVPLLSQ-RCLDIIQP 265 (382)
T ss_dssp HHHHHTTHHHHTTCSCEEEE-------ECCS-CSSCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHT-TCCSEECC
T ss_pred HHHHHHHHHHHhhccCCeEE-------ECCC-CcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc-CCCCEEec
Confidence 57889999999999 88876 3443 346899999999988 7999999999999999999986 78999987
No 122
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.45 E-value=1.2e-06 Score=91.96 Aligned_cols=125 Identities=8% Similarity=-0.054 Sum_probs=106.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
+++.+.++|+.+. +.||+.|.|++|++ +++...++|+++++++ +++|.|....+|+ ..++
T Consensus 165 ~~~~~~~~a~~~~-~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~--~~~a 226 (392)
T 1tzz_A 165 GLSMLRGEMRGYL-DRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFN--LETG 226 (392)
T ss_dssp CHHHHHHHHHHHH-TTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCC--HHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC--HHHH
Confidence 7899999998887 67999999998872 3677889999999987 5889998888884 5788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC----CcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP----ELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~----gaDgVMIG 405 (540)
.++++.|++.|+++|- |.+ .+.+|+..+++++.+ ++||++.+.+.+++++.++++. . .+|.|++-
T Consensus 227 ~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~~~~~d~v~ik 295 (392)
T 1tzz_A 227 IAYAKMLRDYPLFWYE-------EVG-DPLDYALQAALAEFY--PGPMATGENLFSHQDARNLLRY-GGMRPDRDWLQFD 295 (392)
T ss_dssp HHHHHHHTTSCCSEEE-------CCS-CTTCHHHHHHHTTTC--CSCEEECTTCCSHHHHHHHHHH-SCCCTTTCEECCC
T ss_pred HHHHHHHHHcCCCeec-------CCC-ChhhHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHc-CCCccCCcEEEEC
Confidence 9999999999999873 444 346899999999988 7999999999999999999986 6 79999874
No 123
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=98.43 E-value=4.2e-06 Score=103.82 Aligned_cols=194 Identities=10% Similarity=0.023 Sum_probs=125.7
Q ss_pred CCcEEEccCC-CCCCHHHHHHHHHhC-CCEE-EeccceechhccCChhhhhhhhccc-CCCeEEEEecCCcHHH---HHH
Q 009196 186 REKLYLAPLT-TVGNLPFRRVCKVLG-ADVT-CGEMAMCTNLLQGQASEWALLRRHS-SEDLFGVQICGAYPDT---LAR 258 (540)
Q Consensus 186 knrliLAPM~-~vtdlpfR~l~~~~G-adl~-~TEmi~a~~l~~g~~~e~~ll~~~~-~e~p~~vQL~G~~p~~---~a~ 258 (540)
+.+|+.|||+ ++++..+---+.+.| .+++ -..+...+.+ ..+...++... .+.||++.+.-.+|+. +..
T Consensus 582 ~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l----~~~i~~vk~~~~~~~p~gvN~~~~~p~~~~~~~~ 657 (2060)
T 2uva_G 582 VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKM----SDAISKIEKAIPPGRGITVNLIYVNPRAMGWQIP 657 (2060)
T ss_dssp SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHH----HHHHHHHGGGSCTTCCEEEEEETTCTTHHHHHHH
T ss_pred cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHH----HHHHHHHHhhcccCCCeEecccccCcccchhHHH
Confidence 6789999999 788877654444444 4433 1111111111 12222333332 3689999988766652 345
Q ss_pred HHHHHHHhCCCCE--EEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHH
Q 009196 259 TVELIDQQCTVDF--IDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADI 336 (540)
Q Consensus 259 AA~~~~~~aG~D~--IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~l 336 (540)
..+.+. +.|++. |.+..|.|. ++.+.++++.. ++++.. +-.+ ..++...+..+
T Consensus 658 ~~~~~~-~~gv~i~gv~~~~G~p~---------------~e~~~~~l~~~----gi~~i~-~v~~----~~~a~~~v~~l 712 (2060)
T 2uva_G 658 LLGRLR-ADGVPIEGLTIGAGVPS---------------IEVANEYIQTL----GIRHIS-FKPG----SVDAIQQVINI 712 (2060)
T ss_dssp HHHHHH-TTTCCEEEEEEESSCCC---------------HHHHHHHHHHS----CCSEEE-ECCC----SHHHHHHHHHH
T ss_pred HHHHHH-HcCCCcceEeecCCCCC---------------HHHHHHHHHHc----CCeEEE-ecCC----HHHHHHHHHHH
Confidence 556665 568888 888776663 23344444443 677663 3333 25667777788
Q ss_pred HHcCCcEEE---EecccccCccCC-----CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH-----------hcCC
Q 009196 337 GTWGASAVT---VHGRTRQQRYSK-----LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK-----------SDCP 397 (540)
Q Consensus 337 eeaGvdaIt---VHgRtr~q~y~g-----~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l-----------~~~~ 397 (540)
.++|+|+|+ +-|... ++..+ ..-...+.+|++.+ +||||+.|||.+.+++.++| . .
T Consensus 713 ~~aG~D~iV~~q~~G~ea-GGH~g~~d~~~~~l~lv~~i~~~~--~ipviaaGGI~~g~~i~aaltg~ws~~~g~pa--l 787 (2060)
T 2uva_G 713 AKANPTFPIILQWTGGRG-GGHHSFEDFHQPILLMYSRIRKCS--NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPP--M 787 (2060)
T ss_dssp HHHCTTSCEEEEECCTTS-SSSCCSCCSHHHHHHHHHHHHTST--TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCC--C
T ss_pred HHcCCCEEEEeeeEcccC-CCCCCcccccchHHHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCC--C
Confidence 999999998 554321 22222 12356788898888 79999999999999999999 6 6
Q ss_pred CcCeeeecHHHHhCCC
Q 009196 398 ELASCMIARGALIKPW 413 (540)
Q Consensus 398 gaDgVMIGRgaL~nPw 413 (540)
||||||+|+.++.=..
T Consensus 788 GAdgV~~GT~f~~t~E 803 (2060)
T 2uva_G 788 PFDGCMFGSRMMTAKE 803 (2060)
T ss_dssp CCSCEEESGGGGGBTT
T ss_pred CCCEEEEchhhhcCcC
Confidence 9999999999887543
No 124
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.43 E-value=1.3e-06 Score=90.76 Aligned_cols=140 Identities=8% Similarity=-0.021 Sum_probs=115.9
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEec
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVR 319 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR 319 (540)
-|+...+...+++.+++.|+.+. +.||..|.|++|| +++.-.+.+++|++++ ++++.|...
T Consensus 130 v~~~~~~~~~~~~~~~~~a~~~~-~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan 192 (356)
T 3ro6_B 130 LPTSVTIGIKPVEETLAEAREHL-ALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPN 192 (356)
T ss_dssp EEBCEEECSCCHHHHHHHHHHHH-HTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECT
T ss_pred eeeeEEEcCCCHHHHHHHHHHHH-HcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 34556777789999998888776 4699999999886 3566778899999987 679999999
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC-C
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP-E 398 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~-g 398 (540)
.+|+ ..++.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++++.+.++.++.+++.. . .
T Consensus 193 ~~~~--~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~-~~~ 259 (356)
T 3ro6_B 193 QSYD--RDGLLRLDRLVQELGIEFIE-------QPF-PAGRTDWLRALPKAI--RRRIAADESLLGPADAFALAAP-PAA 259 (356)
T ss_dssp TCCC--HHHHHHHHHHHHHTTCCCEE-------CCS-CTTCHHHHHTSCHHH--HHTEEESTTCCSHHHHHHHHSS-SCS
T ss_pred CCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-CCCcHHHHHHHHhcC--CCCEEeCCcCCCHHHHHHHHhc-CCc
Confidence 9995 57889999999999999983 444 345899999999888 6999999999999999998885 6 7
Q ss_pred cCeeeecHHHHhC
Q 009196 399 LASCMIARGALIK 411 (540)
Q Consensus 399 aDgVMIGRgaL~n 411 (540)
+|.|++--+-++.
T Consensus 260 ~d~v~~k~~~~GG 272 (356)
T 3ro6_B 260 CGIFNIKLMKCGG 272 (356)
T ss_dssp CSEEEECHHHHCS
T ss_pred CCEEEEcccccCC
Confidence 9999997665543
No 125
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.43 E-value=4.5e-06 Score=83.46 Aligned_cols=158 Identities=14% Similarity=0.129 Sum_probs=107.7
Q ss_pred CCeEEEEecCCcH--HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcccccc----------CCchHHHHHHHHhcc
Q 009196 241 EDLFGVQICGAYP--DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLL----------TKPMRMKGIIEATSG 308 (540)
Q Consensus 241 e~p~~vQL~G~~p--~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl----------~~p~~l~eIv~av~~ 308 (540)
+..++.-|...+| +.+.+.++.+. ++|+|+|+|+. |...-.-+| -.+. -+.....++++++++
T Consensus 16 ~~~~i~~i~~gdp~~~~~~~~~~~l~-~~GaD~ieig~--P~sdp~~DG--~~i~~a~~~al~~G~~~~~~~~~v~~ir~ 90 (268)
T 1qop_A 16 EGAFVPFVTLGDPGIEQSLKIIDTLI-DAGADALELGV--PFSDPLADG--PTIQNANLRAFAAGVTPAQCFEMLAIIRE 90 (268)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEEC--CCSCCTTCC--HHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCCCHHHHHHHHHHHH-HCCCCEEEECC--CCCCccCCC--HHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 4456777777777 88888888887 78999999954 432111011 0000 145667789999998
Q ss_pred c-ccccEEEEecCCCCCC--hhHHHHHHHHHHHcCCcEEEEecccc--------------------------c-------
Q 009196 309 T-VDKPITIKVRTGYFEG--KNRIDSLIADIGTWGASAVTVHGRTR--------------------------Q------- 352 (540)
Q Consensus 309 ~-v~iPVtVKiR~G~~e~--~~~~~~la~~leeaGvdaItVHgRtr--------------------------~------- 352 (540)
. +++||.+ + ++.+. ......+++.+.++|++.|++|.-+. .
T Consensus 91 ~~~~~Pv~l-m--~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~ 167 (268)
T 1qop_A 91 KHPTIPIGL-L--MYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVA 167 (268)
T ss_dssp HCSSSCEEE-E--ECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHH
T ss_pred cCCCCCEEE-E--EcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHH
Confidence 8 7899876 2 11100 00125778888888988888764210 0
Q ss_pred ------------CccCCC------cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 353 ------------QRYSKL------ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 353 ------------q~y~g~------adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
.+++|. ...+.++++++.. ++||+..|||.+++++.+++. .|||+|+||++++.
T Consensus 168 ~~~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~--agAD~vVVGSai~~ 239 (268)
T 1qop_A 168 SYGRGYTYLLSRSGVTGAENRGALPLHHLIEKLKEYH--AAPALQGFGISSPEQVSAAVR--AGAAGAISGSAIVK 239 (268)
T ss_dssp HHCCSCEEEESSSSCCCSSSCC--CCHHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHH--TTCSEEEECHHHHH
T ss_pred hhCCCcEEEEecCCcCCCccCCCchHHHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHH--cCCCEEEEChHHhh
Confidence 012332 1368899999877 799999999999999999776 68999999998763
No 126
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.43 E-value=5.2e-06 Score=85.55 Aligned_cols=139 Identities=9% Similarity=0.061 Sum_probs=111.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCC
Q 009196 244 FGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGY 322 (540)
Q Consensus 244 ~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~ 322 (540)
+-..+.+.+++.+.+.|+.+. +.||+.|.|+.|+ +++...++|++|+++- ++++.|...-+|
T Consensus 131 ~~~~~~~~~~~~~~~~a~~~~-~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~g~~~~l~vDan~~~ 193 (345)
T 2zad_A 131 TDKTVGIDTVENRVKEAKKIF-EEGFRVIKIKVGE----------------NLKEDIEAVEEIAKVTRGAKYIVDANMGY 193 (345)
T ss_dssp BCEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCS----------------CHHHHHHHHHHHHHHSTTCEEEEECTTCS
T ss_pred eeEEecCCCHHHHHHHHHHHH-HcCcCEEEEeecC----------------CHHHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 334466678999999998887 6799999999875 3666678889988872 467777777777
Q ss_pred CCChhHHHHHHHHHHHcCCc--EEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 323 FEGKNRIDSLIADIGTWGAS--AVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 323 ~e~~~~~~~la~~leeaGvd--aItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+ ..++.++++.|++.|++ +|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|
T Consensus 194 ~--~~~a~~~~~~l~~~~i~~~~iE-------~P~-~~~~~~~~~~l~~~~--~ipia~dE~~~~~~~~~~~i~~-~~~d 260 (345)
T 2zad_A 194 T--QKEAVEFARAVYQKGIDIAVYE-------QPV-RREDIEGLKFVRFHS--PFPVAADESARTKFDVMRLVKE-EAVD 260 (345)
T ss_dssp C--HHHHHHHHHHHHHTTCCCSEEE-------CCS-CTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHH-TCCS
T ss_pred C--HHHHHHHHHHHHhcCCCeeeee-------CCC-CcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHHh-CCCC
Confidence 3 57889999999999999 763 444 346899999999998 7999999999999999999987 7899
Q ss_pred eeee--cHHHHhCC
Q 009196 401 SCMI--ARGALIKP 412 (540)
Q Consensus 401 gVMI--GRgaL~nP 412 (540)
.|++ +||-+...
T Consensus 261 ~v~ik~~~GGit~~ 274 (345)
T 2zad_A 261 YVNIKLMKSGISDA 274 (345)
T ss_dssp EEEECHHHHHHHHH
T ss_pred EEEEecccccHHHH
Confidence 9999 77665544
No 127
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.42 E-value=4.8e-07 Score=88.42 Aligned_cols=87 Identities=13% Similarity=-0.001 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+..++++.++++|+++|+|+..+.... ....+ +.++++++.+ ++||+++|+|.+++++..++. .|||+|++|+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~~~~~~l~--~Gad~V~lg~~ 106 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG-TGDNR-ALIAEVAQAM--DIKVELSGGIRDDDTLAAALA--TGCTRVNLGTA 106 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT-SCCCH-HHHHHHHHHC--SSEEEEESSCCSHHHHHHHHH--TTCSEEEECHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc-CCChH-HHHHHHHHhc--CCcEEEECCcCCHHHHHHHHH--cCCCEEEECch
Confidence 578899999999999999997654321 22345 8899999988 799999999999999999887 68999999999
Q ss_pred HHhCCCchHHHHh
Q 009196 408 ALIKPWIFTEIKE 420 (540)
Q Consensus 408 aL~nPwif~eik~ 420 (540)
++.+|+++.++.+
T Consensus 107 ~l~~p~~~~~~~~ 119 (244)
T 1vzw_A 107 ALETPEWVAKVIA 119 (244)
T ss_dssp HHHCHHHHHHHHH
T ss_pred HhhCHHHHHHHHH
Confidence 9999998888754
No 128
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=98.42 E-value=5.8e-06 Score=98.93 Aligned_cols=111 Identities=11% Similarity=0.045 Sum_probs=83.3
Q ss_pred CchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCc--------cCCCcCHHHHH
Q 009196 295 KPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQR--------YSKLADWDYIY 365 (540)
Q Consensus 295 ~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~--------y~g~adw~~I~ 365 (540)
+++-+.++|+.+++.. ++||.||+-.+. .....|..+.++|||+|+|.|.....+ +.+.+-...+.
T Consensus 1011 s~edl~~~I~~Lk~~~~~~PV~VKlv~~~-----gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ 1085 (1520)
T 1ofd_A 1011 SIEDLAQLIYDLHQINPEAQVSVKLVAEI-----GIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVT 1085 (1520)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEEEEEECST-----THHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEecCCC-----ChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHH
Confidence 3456788999999988 899999987642 234567889999999999977642211 12223235566
Q ss_pred HHHHHc-----CCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 366 QCARKA-----SDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 366 ~i~~~~-----~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
++.+.+ ..+||||+.|||.+..|+.+++. .|||+|++||++|.-.
T Consensus 1086 ev~~al~~~glr~~IpVIAdGGIrtG~DVakALa--LGAdaV~iGTafL~al 1135 (1520)
T 1ofd_A 1086 EVHRVLMENQLRDRVLLRADGGLKTGWDVVMAAL--MGAEEYGFGSIAMIAE 1135 (1520)
T ss_dssp HHHHHHHHTTCGGGCEEEEESSCCSHHHHHHHHH--TTCSEEECSHHHHHHT
T ss_pred HHHHHHHhcCCCCCceEEEECCCCCHHHHHHHHH--cCCCeeEEcHHHHHHH
Confidence 666543 12599999999999999999998 7999999999998744
No 129
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.41 E-value=1.1e-06 Score=93.57 Aligned_cols=125 Identities=9% Similarity=0.114 Sum_probs=105.8
Q ss_pred CcH-HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 251 AYP-DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 251 ~~p-~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
.++ +.|+++|+.+. +.||+.|.|+.|+ +++...++|++|++++ +++|.|....+|+ .+
T Consensus 183 ~~~~e~~~~~a~~~~-~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~--~~ 243 (428)
T 3bjs_A 183 YQPKESLAEEAQEYI-ARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYT--MA 243 (428)
T ss_dssp SCCHHHHHHHHHHHH-HHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCC--HH
T ss_pred CChHHHHHHHHHHHH-HCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCC--HH
Confidence 578 99999998876 5699999999876 4677889999999987 6889998888884 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC-ceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD-LQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~-IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++.++++.|++.|++.|- |.. .+.+|+..+++++.+ + +||++.+.+.+++++.++++. ..+|.|++=
T Consensus 244 eai~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik 311 (428)
T 3bjs_A 244 DARRVLPVLAEIQAGWLE-------EPF-ACNDFASYREVAKIT--PLVPIAAGENHYTRFEFGQMLDA-GAVQVWQPD 311 (428)
T ss_dssp HHHHHHHHHHHTTCSCEE-------CCS-CTTCHHHHHHHTTTC--SSSCEEECTTCCSHHHHHHHHTT-CCEEEECCB
T ss_pred HHHHHHHHHHhcCCCEEE-------CCC-CccCHHHHHHHHHhC--CCCcEEcCCCcCCHHHHHHHHHh-CCCCEEEeC
Confidence 899999999999999873 443 346899999999888 6 999999999999999999986 779998873
No 130
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.40 E-value=3.7e-06 Score=91.43 Aligned_cols=131 Identities=15% Similarity=0.077 Sum_probs=92.1
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
-.++.+.++..++ ++|+|.|=|.... | ..+.+.+.++.+++.. ++||.+---. .
T Consensus 278 v~~d~~eR~~aLv--~AGvD~iviD~ah--------G-------hs~~v~~~i~~ik~~~p~~~viaGNVa--------T 332 (556)
T 4af0_A 278 TRPGDKDRLKLLA--EAGLDVVVLDSSQ--------G-------NSVYQIEFIKWIKQTYPKIDVIAGNVV--------T 332 (556)
T ss_dssp SSHHHHHHHHHHH--HTTCCEEEECCSC--------C-------CSHHHHHHHHHHHHHCTTSEEEEEEEC--------S
T ss_pred cCccHHHHHHHHH--hcCCcEEEEeccc--------c-------ccHHHHHHHHHHHhhCCcceEEecccc--------C
Confidence 3467777777666 4799988775322 2 2455678888888776 6777763322 2
Q ss_pred HHHHHHHHHcCCcEEEEec------ccccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 330 DSLIADIGTWGASAVTVHG------RTRQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHg------Rtr~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
.+-++.|.++|+|+|-|-- -||...-.|.+....|.+|++... -.+|||+-|||.+.-|+.++|. .|||+|
T Consensus 333 ~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAla--aGAd~V 410 (556)
T 4af0_A 333 REQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKALA--LGASAV 410 (556)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHH--TTCSEE
T ss_pred HHHHHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHhh--cCCCEE
Confidence 3567788899999998832 233333334456677777765432 1599999999999999999998 799999
Q ss_pred eecHHH
Q 009196 403 MIARGA 408 (540)
Q Consensus 403 MIGRga 408 (540)
|+|.-+
T Consensus 411 MlGsll 416 (556)
T 4af0_A 411 MMGGLL 416 (556)
T ss_dssp EESTTT
T ss_pred EEchhh
Confidence 999644
No 131
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.40 E-value=1.3e-06 Score=91.50 Aligned_cols=127 Identities=9% Similarity=0.131 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~ 330 (540)
++.+++.|+.+. +.||+.|.|++||+ | .+++...++|++||+++ +++|.|....+|+ +..++.
T Consensus 147 ~e~~~~~a~~~~-~~Gf~~iKlk~g~~---------g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~-d~~~A~ 211 (374)
T 3sjn_A 147 PEDNVAIVQGLK-DQGFSSIKFGGGVM---------G----DDPDTDYAIVKAVREAAGPEMEVQIDLASKWH-TCGHSA 211 (374)
T ss_dssp GGGGHHHHHHHH-TTTCSEEEEECTTT---------T----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTC-SHHHHH
T ss_pred HHHHHHHHHHHH-HcCCCEEEeccCCC---------C----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCC-CHHHHH
Confidence 488998888876 56999999999986 1 24788889999999987 6799999999995 257899
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++-
T Consensus 212 ~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k 275 (374)
T 3sjn_A 212 MMAKRLEEFNLNWIE-------EPV-LADSLISYEKLSRQV--SQKIAGGESLTTRYEFQEFITK-SNADIVQPD 275 (374)
T ss_dssp HHHHHSGGGCCSEEE-------CSS-CTTCHHHHHHHHHHC--SSEEEECTTCCHHHHHHHHHHH-HCCSEECCB
T ss_pred HHHHHhhhcCceEEE-------CCC-CcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHc-CCCCEEEeC
Confidence 999999999999884 333 345899999999998 7999999999999999999986 789999864
No 132
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.40 E-value=1.1e-05 Score=82.24 Aligned_cols=182 Identities=14% Similarity=0.084 Sum_probs=107.2
Q ss_pred CCCCHHHHHHHHHhCCC-EEEeccceechh-ccC-----ChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCC
Q 009196 196 TVGNLPFRRVCKVLGAD-VTCGEMAMCTNL-LQG-----QASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCT 268 (540)
Q Consensus 196 ~vtdlpfR~l~~~~Gad-l~~TEmi~a~~l-~~g-----~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG 268 (540)
.+++...-+...+.||+ +.+-|-+.+..- ..| .......++ ..-.-|+.....-.. ..-++.+. .+|
T Consensus 27 d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~-~~v~iPvl~k~~i~~----ide~qil~-aaG 100 (297)
T 4adt_A 27 DVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIR-KCISINVLAKVRIGH----FVEAQILE-ELK 100 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHH-TTCCSEEEEEEETTC----HHHHHHHH-HTT
T ss_pred CCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHH-HhcCCCEEEeccCCc----HHHHHHHH-HcC
Confidence 45666666666677986 444443333222 222 122222222 223568876643222 33344444 589
Q ss_pred CCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc-ccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEe
Q 009196 269 VDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT-VDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVH 347 (540)
Q Consensus 269 ~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~-v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVH 347 (540)
+|.|+.-.+.+. + ++++.+++. .+.++.|-++. .. + +.++.+.|++.|.++
T Consensus 101 AD~Id~s~~~~~---------------~----~li~~i~~~~~g~~vvv~v~~-----~~---E-a~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 101 VDMLDESEVLTM---------------A----DEYNHINKHKFKTPFVCGCTN-----LG---E-ALRRISEGASMIRTK 152 (297)
T ss_dssp CSEEEEETTSCC---------------S----CSSCCCCGGGCSSCEEEEESS-----HH---H-HHHHHHHTCSEEEEC
T ss_pred CCEEEcCCCCCH---------------H----HHHHHHHhcCCCCeEEEEeCC-----HH---H-HHHHHhCCCCEEEEC
Confidence 999943111111 1 223334432 36788775543 11 2 344557899999999
Q ss_pred cccccC--------------------------cc----CCCcCHHHHHHHHHHcCCCceEE--EeCCCCCHHHHHHHHhc
Q 009196 348 GRTRQQ--------------------------RY----SKLADWDYIYQCARKASDDLQVL--GNGDIYSYLDWNKHKSD 395 (540)
Q Consensus 348 gRtr~q--------------------------~y----~g~adw~~I~~i~~~~~~~IPVI--gNGdI~s~eDa~~~l~~ 395 (540)
+|...+ .+ ...++|+.+.++++.+ ++||+ +.|||.+++++.+++.
T Consensus 153 g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~--~iPVivvA~GGI~t~~dv~~~~~- 229 (297)
T 4adt_A 153 GEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLK--RLPVVNFAAGGIATPADAAMCMQ- 229 (297)
T ss_dssp CCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHT--SCSSEEEEESCCCSHHHHHHHHH-
T ss_pred CCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhc--CCCeEEEecCCCCCHHHHHHHHH-
Confidence 872111 01 0146799999999987 57776 9999999999999887
Q ss_pred CCCcCeeeecHHHHhCCCch
Q 009196 396 CPELASCMIARGALIKPWIF 415 (540)
Q Consensus 396 ~~gaDgVMIGRgaL~nPwif 415 (540)
.|||+|+||++++..+...
T Consensus 230 -~GAdgVlVGsai~~a~dp~ 248 (297)
T 4adt_A 230 -LGMDGVFVGSGIFESENPQ 248 (297)
T ss_dssp -TTCSCEEESHHHHTSSCHH
T ss_pred -cCCCEEEEhHHHHcCCCHH
Confidence 6999999999999765443
No 133
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.39 E-value=5.7e-06 Score=86.82 Aligned_cols=148 Identities=9% Similarity=0.046 Sum_probs=117.5
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+...+...+++.+++.|+....+.||..|-|..|++ +++.-.+++++||+++ ++++.|....
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDan~ 203 (383)
T 3i4k_A 139 DVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDINA 203 (383)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEECTT
T ss_pred EEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 4445666778988887777654234999999998763 4667778999999998 5799999999
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+|+ ..++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|
T Consensus 204 ~~~--~~~A~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d 270 (383)
T 3i4k_A 204 RWD--RRTALHYLPILAEAGVELFE-------QPT-PADDLETLREITRRT--NVSVMADESVWTPAEALAVVKA-QAAD 270 (383)
T ss_dssp CSC--HHHHHHHHHHHHHTTCCEEE-------SCS-CTTCHHHHHHHHHHH--CCEEEESTTCSSHHHHHHHHHH-TCCS
T ss_pred CCC--HHHHHHHHHHHHhcCCCEEE-------CCC-ChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHHHc-CCCC
Confidence 995 57899999999999999884 433 346899999999998 6999999999999999999986 7899
Q ss_pred eeeecHHHHhCCCchHHH
Q 009196 401 SCMIARGALIKPWIFTEI 418 (540)
Q Consensus 401 gVMIGRgaL~nPwif~ei 418 (540)
.|++--+-++...=+.++
T Consensus 271 ~v~~k~~~~GGit~~~~i 288 (383)
T 3i4k_A 271 VIALKTTKHGGLLESKKI 288 (383)
T ss_dssp EEEECTTTTTSHHHHHHH
T ss_pred EEEEcccccCCHHHHHHH
Confidence 999875555444333333
No 134
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.38 E-value=2.1e-06 Score=86.24 Aligned_cols=160 Identities=14% Similarity=0.102 Sum_probs=107.9
Q ss_pred CCCeEEEEecCCcH--HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCc-----c-cccc--CCchHHHHHHHHhccc
Q 009196 240 SEDLFGVQICGAYP--DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGA-----G-SCLL--TKPMRMKGIIEATSGT 309 (540)
Q Consensus 240 ~e~p~~vQL~G~~p--~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~-----G-saLl--~~p~~l~eIv~av~~~ 309 (540)
.+..++.-|...+| +.+.+.++.+. ++|+|.|||.+ |.+.-.-+|- . .+|. -+.+.+.++++.+++.
T Consensus 16 ~~~ali~yi~aGdP~~~~~~~~~~~l~-~~GaD~iElgi--PfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~ 92 (267)
T 3vnd_A 16 DKGAFVPFVTIGDPSPELSLKIIQTLV-DNGADALELGF--PFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQ 92 (267)
T ss_dssp TCCEEEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEEC--CCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEECC--CCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 44567777777776 89999999887 78999999963 4322111110 0 0011 2456788999999987
Q ss_pred -ccccEEEEecCCCCCC--hhHHHHHHHHHHHcCCcEEEEeccc--------------------------c---------
Q 009196 310 -VDKPITIKVRTGYFEG--KNRIDSLIADIGTWGASAVTVHGRT--------------------------R--------- 351 (540)
Q Consensus 310 -v~iPVtVKiR~G~~e~--~~~~~~la~~leeaGvdaItVHgRt--------------------------r--------- 351 (540)
+++||.+- ++.+. ..-...|++.+.++|+|.+.++.-. .
T Consensus 93 ~~~~Pivlm---~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~ 169 (267)
T 3vnd_A 93 HPDMPIGLL---LYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSE 169 (267)
T ss_dssp CTTCCEEEE---ECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHH
T ss_pred CCCCCEEEE---ecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHH
Confidence 78998774 22110 0123678888888899988875311 0
Q ss_pred ----------cCccCCC------cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 352 ----------QQRYSKL------ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 352 ----------~q~y~g~------adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
..+++|. ...++++++++.. ++||+..|||.+++++.+.+. .|||+|.||.++.
T Consensus 170 ~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~--~gADgvVVGSaiv 239 (267)
T 3vnd_A 170 QGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIK--AGAAGAISGSAVV 239 (267)
T ss_dssp HCCSCEEESCCCCCC--------CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHH--TTCSEEEECHHHH
T ss_pred hCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHH--cCCCEEEECHHHH
Confidence 0011221 1257788888876 799999999999999997676 6899999998765
No 135
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.34 E-value=4.4e-07 Score=89.69 Aligned_cols=89 Identities=11% Similarity=0.052 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.+..++++.++++|+++|.++.........+ .+++.++++++.+ ++||+.+|+|.+.+++.+++. .|||+|++|+
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g-~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~--~Gad~v~lg~ 104 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFL--AGADKALAAS 104 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCSSC-CCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHH--HTCSEEECCC
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCCCc-ccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH--cCCcHhhhhH
Confidence 3678999999999999999987765544444 5799999999887 799999999999999999886 6999999999
Q ss_pred HHH-h--CCCchHHHHh
Q 009196 407 GAL-I--KPWIFTEIKE 420 (540)
Q Consensus 407 gaL-~--nPwif~eik~ 420 (540)
.++ . +|+.+.++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~ 121 (266)
T 2w6r_A 105 VFHFREIDMRELKEYLK 121 (266)
T ss_dssp CC------CHHHHHHCC
T ss_pred HHHhCCCCHHHHHHHHH
Confidence 999 5 8999988743
No 136
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.33 E-value=4.4e-06 Score=88.46 Aligned_cols=145 Identities=8% Similarity=0.042 Sum_probs=116.8
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEe
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKV 318 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKi 318 (540)
..|+-..+.+.+++.+++.|+.+. +.||..|-| .|+|-... .....+++...++|++||+++ +++|.|..
T Consensus 114 ~v~~y~~~~~~~~e~~~~~a~~~~-~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDa 185 (405)
T 3rr1_A 114 KMRTYSWVGGDRPADVIAGMKALQ-AGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDF 185 (405)
T ss_dssp CEEEEEECCCSSHHHHHHHHHHHH-HTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEEC
T ss_pred ceeeeEeCCCCCHHHHHHHHHHHH-HcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEEC
Confidence 346666777889999999998876 569999999 88874221 112234667788999999988 67999998
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
..+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..
T Consensus 186 N~~~~--~~~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~i~~~~~~~~~l~~-~a 252 (405)
T 3rr1_A 186 HGRVS--APMAKVLIKELEPYRPLFIE-------EPV-LAEQAETYARLAAHT--HLPIAAGERMFSRFDFKRVLEA-GG 252 (405)
T ss_dssp CSCBC--HHHHHHHHHHHGGGCCSCEE-------CSS-CCSSTHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHH-CC
T ss_pred CCCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhcC--CCCEEecCCcCCHHHHHHHHHH-hC
Confidence 88884 57899999999999999884 333 345889999999988 7999999999999999999986 78
Q ss_pred cCeeeecH
Q 009196 399 LASCMIAR 406 (540)
Q Consensus 399 aDgVMIGR 406 (540)
+|.|++--
T Consensus 253 ~d~v~~d~ 260 (405)
T 3rr1_A 253 VSILQPDL 260 (405)
T ss_dssp CSEECCBT
T ss_pred CCeEEECh
Confidence 99998753
No 137
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.32 E-value=3.4e-06 Score=89.11 Aligned_cols=165 Identities=7% Similarity=-0.031 Sum_probs=124.0
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccc----c--CCcccccc--CCchHHHHHHHHhcccc--
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVV----N--KGAGSCLL--TKPMRMKGIIEATSGTV-- 310 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~----~--~G~GsaLl--~~p~~l~eIv~av~~~v-- 310 (540)
..|+-..+.+.+++.+++.|+.+. +.||..|-|..|++-.... . ..-|..+. +.++...++|++||+++
T Consensus 122 ~v~~y~~~~~~~~e~~~~~a~~~~-~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~ 200 (401)
T 3sbf_A 122 AIPVYTHATSDTMEGIYDLVEGFL-EKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN 200 (401)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHH-HTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC
Confidence 345555677889999999988876 5699999999998531100 0 01122221 12567788999999988
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHH
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWN 390 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~ 390 (540)
+++|.|....+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.
T Consensus 201 d~~l~vDan~~~~--~~~A~~~~~~L~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~ 268 (401)
T 3sbf_A 201 QFHILHDVHERLF--PNQAIQFAKEVEQYKPYFIE-------DIL-PPNQTEWLDNIRSQS--SVSLGLGELFNNPEEWK 268 (401)
T ss_dssp SSEEEEECTTCSC--HHHHHHHHHHHGGGCCSCEE-------CSS-CTTCGGGHHHHHTTC--CCCEEECTTCCSHHHHH
T ss_pred CCEEEEECCCCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-ChhHHHHHHHHHhhC--CCCEEeCCccCCHHHHH
Confidence 6899999998984 57899999999999999884 333 345788899999988 79999999999999999
Q ss_pred HHHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 391 KHKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 391 ~~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
++++. ..+|.|++--+-.+-..=+.+|.
T Consensus 269 ~~i~~-~~~d~v~~k~~~~GGit~~~kia 296 (401)
T 3sbf_A 269 SLIAN-RRIDFIRCHVSQIGGITPALKLG 296 (401)
T ss_dssp HHHHT-TCCSEECCCGGGGTSHHHHHHHH
T ss_pred HHHhc-CCCCEEecCccccCCHHHHHHHH
Confidence 99986 78999998766555544444443
No 138
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.32 E-value=2.7e-06 Score=90.41 Aligned_cols=156 Identities=8% Similarity=-0.101 Sum_probs=118.1
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccC------------C-----ccccccCCchHHHHHH
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNK------------G-----AGSCLLTKPMRMKGII 303 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~------------G-----~GsaLl~~p~~l~eIv 303 (540)
.-|+-.-+.+.+++.+++.|+.+. +.||..|-|..|+|....... + .+-...++++...++|
T Consensus 132 ~v~~y~~~~~~~~e~~~~~a~~~~-~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v 210 (418)
T 3r4e_A 132 GIMVYGHANGSDIAETVEAVGHYI-DMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLF 210 (418)
T ss_dssp SEEEEEEEEESSHHHHHHHHHHHH-HTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHH
T ss_pred eeeEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 345545566788999999888876 569999999999985322100 0 0011112356778899
Q ss_pred HHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC
Q 009196 304 EATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG 381 (540)
Q Consensus 304 ~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG 381 (540)
++||+++ +++|.|....+|+ ..++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+
T Consensus 211 ~avR~a~G~d~~l~vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE 278 (418)
T 3r4e_A 211 EELRKTYGFDHHLLHDGHHRYT--PQEAANLGKMLEPYQLFWLE-------DCT-PAENQEAFRLVRQHT--VTPLAVGE 278 (418)
T ss_dssp HHHHHHHCSSSEEEEECTTCSC--HHHHHHHHHHHGGGCCSEEE-------SCS-CCSSGGGGHHHHHHC--CSCEEECT
T ss_pred HHHHHHcCCCCeEEEeCCCCCC--HHHHHHHHHHHHhhCCCEEE-------CCC-CccCHHHHHHHHhcC--CCCEEEcC
Confidence 9999988 6799999988884 57899999999999999884 433 345788899999998 79999999
Q ss_pred CCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 382 DIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 382 dI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
.+.+++++.++++. ..+|.|++--+-++
T Consensus 279 ~~~~~~~~~~~l~~-~a~d~v~~k~~~~G 306 (418)
T 3r4e_A 279 IFNTIWDAKDLIQN-QLIDYIRATVVGAG 306 (418)
T ss_dssp TCCSGGGTHHHHHT-TCCSEECCCTTTTT
T ss_pred CcCCHHHHHHHHHc-CCCCeEecCccccC
Confidence 99999999999986 78999987644433
No 139
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.32 E-value=3.7e-06 Score=88.93 Aligned_cols=145 Identities=8% Similarity=0.037 Sum_probs=114.1
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcccc-ccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSC-LLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~Gsa-Ll~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
.+++.+++.|+.+. +.||..|-|+.|+|... ..|.. ...+++...+++++||+++ +++|.|....+|+ ..
T Consensus 150 ~~~e~~~~~a~~~~-~~G~~~~KlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~--~~ 222 (404)
T 4e5t_A 150 NDADMAAEAAAKAV-DQGFTAVKFDPAGAYTI----YDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFT--VS 222 (404)
T ss_dssp TCHHHHHHHHHHHH-HHTCSEEEECCSCCCBT----TCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBC--HH
T ss_pred CCHHHHHHHHHHHH-HcCCCEEeeCCCCCCcc----cccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcC--HH
Confidence 57899998888776 45999999999988531 12221 1224677888999999998 6799999888884 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
++.++++.|++.|+++|- |.. .+.+++..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++--+
T Consensus 223 ~A~~~~~~l~~~~i~~iE-------eP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~d~v~~d~~ 291 (404)
T 4e5t_A 223 GAKRLARRLEAYDPLWFE-------EPI-PPEKPEDMAEVARYT--SIPVATGERLCTKYEFSRVLET-GAASILQMNLG 291 (404)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHHH-TCCSEECCCTT
T ss_pred HHHHHHHHHhhcCCcEEE-------CCC-CcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHh-CCCCEEecCcc
Confidence 899999999999999884 332 345899999999998 7999999999999999999986 78999987654
Q ss_pred HHhCCC
Q 009196 408 ALIKPW 413 (540)
Q Consensus 408 aL~nPw 413 (540)
-.+-..
T Consensus 292 ~~GGit 297 (404)
T 4e5t_A 292 RVGGLL 297 (404)
T ss_dssp TSSCHH
T ss_pred ccCCHH
Confidence 444433
No 140
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.32 E-value=1.2e-05 Score=84.72 Aligned_cols=142 Identities=11% Similarity=-0.016 Sum_probs=115.1
Q ss_pred CeEEEEec---CCcHHHHHHHH-HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEE
Q 009196 242 DLFGVQIC---GAYPDTLARTV-ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPIT 315 (540)
Q Consensus 242 ~p~~vQL~---G~~p~~~a~AA-~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVt 315 (540)
.|+...+. ..+++.+++.| +.+. +.||..|-|..|++... ...+++.-.++|++||+++ +++|.
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~-~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l~ 195 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVE-AEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVIG 195 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHH-HHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCEE
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHH-HcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeEE
Confidence 35555542 36789998888 7665 35999999999997542 3457888889999999987 68999
Q ss_pred EEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhc
Q 009196 316 IKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSD 395 (540)
Q Consensus 316 VKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~ 395 (540)
|....+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.+++++.++++.
T Consensus 196 vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~ 263 (393)
T 4dwd_A 196 FDANNGYS--VGGAIRVGRALEDLGYSWFE-------EPV-QHYHVGAMGEVAQRL--DITVSAGEQTYTLQALKDLILS 263 (393)
T ss_dssp EECTTCCC--HHHHHHHHHHHHHTTCSEEE-------CCS-CTTCHHHHHHHHHHC--SSEEEBCTTCCSHHHHHHHHHH
T ss_pred EECCCCCC--HHHHHHHHHHHHhhCCCEEE-------CCC-CcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc
Confidence 99998984 57899999999999999884 433 345899999999998 7999999999999999999886
Q ss_pred CCCcCeeeecHH
Q 009196 396 CPELASCMIARG 407 (540)
Q Consensus 396 ~~gaDgVMIGRg 407 (540)
. +|.|++--+
T Consensus 264 -~-~d~v~~k~~ 273 (393)
T 4dwd_A 264 -G-VRMVQPDIV 273 (393)
T ss_dssp -T-CCEECCCTT
T ss_pred -C-CCEEEeCcc
Confidence 6 999987533
No 141
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.30 E-value=8e-06 Score=84.76 Aligned_cols=144 Identities=11% Similarity=0.062 Sum_probs=116.3
Q ss_pred EEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCC
Q 009196 245 GVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGY 322 (540)
Q Consensus 245 ~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~ 322 (540)
...+...+++.+++.|+.+. +.||..|.|+.|++ ++.-.+++++|++++ ++++.|....+|
T Consensus 132 ~~~~~~~~~~~~~~~a~~~~-~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~~ 194 (354)
T 3jva_A 132 DITLGIDEPNVMAQKAVEKV-KLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQAW 194 (354)
T ss_dssp CEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTCS
T ss_pred eEEeCCCCHHHHHHHHHHHH-HhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCCC
Confidence 34566678999998888776 56999999998763 355677889999887 678999988888
Q ss_pred CCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 323 FEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 323 ~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
+ ..++.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|
T Consensus 195 ~--~~~a~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~~~d~v 261 (354)
T 3jva_A 195 T--PKDAVKAIQALADYQIELVE-------QPV-KRRDLEGLKYVTSQV--NTTIMADESCFDAQDALELVKK-GTVDVI 261 (354)
T ss_dssp C--HHHHHHHHHHTTTSCEEEEE-------CCS-CTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHH-TCCSEE
T ss_pred C--HHHHHHHHHHHHhcCCCEEE-------CCC-ChhhHHHHHHHHHhC--CCCEEEcCCcCCHHHHHHHHHc-CCCCEE
Confidence 4 57889999999999988884 433 345899999999988 7999999999999999999986 789999
Q ss_pred eecHHHHhCCCchHHH
Q 009196 403 MIARGALIKPWIFTEI 418 (540)
Q Consensus 403 MIGRgaL~nPwif~ei 418 (540)
++--+-.+...=+.++
T Consensus 262 ~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 262 NIKLMKCGGIHEALKI 277 (354)
T ss_dssp EECHHHHTSHHHHHHH
T ss_pred EECchhcCCHHHHHHH
Confidence 9987776665444444
No 142
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.28 E-value=4.7e-06 Score=88.95 Aligned_cols=127 Identities=7% Similarity=0.010 Sum_probs=105.8
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
+.+++.++++|+.+. +.||+.|.|+.|+ +++...++|++|++++ +++|.|...-+|+ .+
T Consensus 196 ~~~~e~~~~~a~~~~-~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~--~~ 256 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAV-ADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWD--VG 256 (441)
T ss_dssp TSCHHHHHHHHHHHH-HTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCC--HH
T ss_pred CCCHHHHHHHHHHHH-HcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCC--HH
Confidence 347999999998887 6799999999773 3677788999999987 5788888888884 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++.++++.|++.|+++|- |.. .+.+|+..+++++.+. ++||++.+.+++++++.++++. ..+|.|++-
T Consensus 257 ~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~-~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~ik 324 (441)
T 2hxt_A 257 PAIDWMRQLAEFDIAWIE-------EPT-SPDDVLGHAAIRQGIT-PVPVSTGEHTQNRVVFKQLLQA-GAVDLIQID 324 (441)
T ss_dssp HHHHHHHTTGGGCCSCEE-------CCS-CTTCHHHHHHHHHHHT-TSCEEECTTCCSHHHHHHHHHH-TCCSEECCC
T ss_pred HHHHHHHHHHhcCCCeee-------CCC-CHHHHHHHHHHHhhCC-CCCEEEeCCcCCHHHHHHHHHc-CCCCEEEeC
Confidence 889999999999999873 443 3468999999999873 4999999999999999999986 789999873
No 143
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.28 E-value=1.7e-05 Score=75.52 Aligned_cols=156 Identities=10% Similarity=0.028 Sum_probs=101.3
Q ss_pred hhhhhcccCCCeEEEEecCCc-HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc
Q 009196 232 WALLRRHSSEDLFGVQICGAY-PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV 310 (540)
Q Consensus 232 ~~ll~~~~~e~p~~vQL~G~~-p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v 310 (540)
.+.++....+.|+.+-+.-.+ ++.+. +.+. ++|+|+|=++...+ .+.+.++++.+++.
T Consensus 44 i~~ir~~~~~~~i~~~~~~~~~~~~~~---~~~~-~~Gad~v~v~~~~~----------------~~~~~~~~~~~~~~- 102 (211)
T 3f4w_A 44 IKAIKEKYPHKEVLADAKIMDGGHFES---QLLF-DAGADYVTVLGVTD----------------VLTIQSCIRAAKEA- 102 (211)
T ss_dssp HHHHHHHCTTSEEEEEEEECSCHHHHH---HHHH-HTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-
T ss_pred HHHHHHhCCCCEEEEEEEeccchHHHH---HHHH-hcCCCEEEEeCCCC----------------hhHHHHHHHHHHHc-
Confidence 333443323567765544333 44433 3344 57999999974311 13345566665543
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHH
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWN 390 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~ 390 (540)
++++.+-+.. . .+..+.++.+.+.|++.|.++.....+.+ ++..++.++++++.++ ++||++.|||. ++++.
T Consensus 103 g~~~~v~~~~-~----~t~~~~~~~~~~~g~d~i~v~~g~~g~~~-~~~~~~~i~~l~~~~~-~~~i~~~gGI~-~~~~~ 174 (211)
T 3f4w_A 103 GKQVVVDMIC-V----DDLPARVRLLEEAGADMLAVHTGTDQQAA-GRKPIDDLITMLKVRR-KARIAVAGGIS-SQTVK 174 (211)
T ss_dssp TCEEEEECTT-C----SSHHHHHHHHHHHTCCEEEEECCHHHHHT-TCCSHHHHHHHHHHCS-SCEEEEESSCC-TTTHH
T ss_pred CCeEEEEecC-C----CCHHHHHHHHHHcCCCEEEEcCCCccccc-CCCCHHHHHHHHHHcC-CCcEEEECCCC-HHHHH
Confidence 5555553222 1 13456778889999999998744322222 2346889999999875 69999999995 99999
Q ss_pred HHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 391 KHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 391 ~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
++++ .|||+|.+||+++..+.....+
T Consensus 175 ~~~~--~Gad~vvvGsai~~~~d~~~~~ 200 (211)
T 3f4w_A 175 DYAL--LGPDVVIVGSAITHAADPAGEA 200 (211)
T ss_dssp HHHT--TCCSEEEECHHHHTCSSHHHHH
T ss_pred HHHH--cCCCEEEECHHHcCCCCHHHHH
Confidence 9776 7999999999998876554333
No 144
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.28 E-value=6.1e-06 Score=88.94 Aligned_cols=134 Identities=15% Similarity=0.024 Sum_probs=92.3
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHH
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADI 336 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~l 336 (540)
+.|+.+. ++|+|.|-+... + .+.....+.++.+++.+ ++|+.++--. ..+.+..+
T Consensus 236 ~~a~~l~-~~G~d~ivi~~a-----------~----g~~~~~~~~i~~l~~~~p~~pvi~G~v~--------t~~~a~~~ 291 (491)
T 1zfj_A 236 ERAEALF-EAGADAIVIDTA-----------H----GHSAGVLRKIAEIRAHFPNRTLIAGNIA--------TAEGARAL 291 (491)
T ss_dssp HHHHHHH-HHTCSEEEECCS-----------C----TTCHHHHHHHHHHHHHCSSSCEEEEEEC--------SHHHHHHH
T ss_pred HHHHHHH-HcCCCeEEEeee-----------c----CcchhHHHHHHHHHHHCCCCcEeCCCcc--------CHHHHHHH
Confidence 3344554 469999998741 1 13445667788888887 8898854222 13667788
Q ss_pred HHcCCcEEEEec------ccccCccCCCcCHHHHHHHHHHcC-CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 337 GTWGASAVTVHG------RTRQQRYSKLADWDYIYQCARKAS-DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 337 eeaGvdaItVHg------Rtr~q~y~g~adw~~I~~i~~~~~-~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
.++|+++|.|.. .++.....+.+.++.+.+++..+. .++|||+.|||.+..|+.+++. .|||+||+||+++
T Consensus 292 ~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~--~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 292 YDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALA--AGGNAVMLGSMFA 369 (491)
T ss_dssp HHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHH--TTCSEEEESTTTT
T ss_pred HHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHH--cCCcceeeCHHhh
Confidence 899999998841 111111113345677777765321 1699999999999999999997 6999999999999
Q ss_pred hCCCchHH
Q 009196 410 IKPWIFTE 417 (540)
Q Consensus 410 ~nPwif~e 417 (540)
..++...+
T Consensus 370 ~~~e~~~~ 377 (491)
T 1zfj_A 370 GTDEAPGE 377 (491)
T ss_dssp TBSSCCCC
T ss_pred CCCcCcce
Confidence 77664443
No 145
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.27 E-value=4e-05 Score=77.17 Aligned_cols=146 Identities=10% Similarity=0.057 Sum_probs=100.5
Q ss_pred CCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEec
Q 009196 240 SEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR 319 (540)
Q Consensus 240 ~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR 319 (540)
.+-|+...=+.-++.++..|. .+|+|+|=|... .+ .++.+.++++..++ .++.+.+-+.
T Consensus 112 v~lPvl~kdfiid~~qv~~A~-----~~GAD~VlLi~a--------------~l-~~~~l~~l~~~a~~-lGl~~lvev~ 170 (272)
T 3qja_A 112 VSIPVLRKDFVVQPYQIHEAR-----AHGADMLLLIVA--------------AL-EQSVLVSMLDRTES-LGMTALVEVH 170 (272)
T ss_dssp CSSCEEEESCCCSHHHHHHHH-----HTTCSEEEEEGG--------------GS-CHHHHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCCEEECccccCHHHHHHHH-----HcCCCEEEEecc--------------cC-CHHHHHHHHHHHHH-CCCcEEEEcC
Confidence 355666554555665554443 479999988422 12 24456667766654 4666665442
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
+. .+ +.++.+.|++.|.+.+|.... -..+++.+.++++.++.++|||+.|||.+++|+.+++. .|+
T Consensus 171 -----t~---ee-~~~A~~~Gad~IGv~~r~l~~---~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~--~Ga 236 (272)
T 3qja_A 171 -----TE---QE-ADRALKAGAKVIGVNARDLMT---LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAG--AGA 236 (272)
T ss_dssp -----SH---HH-HHHHHHHTCSEEEEESBCTTT---CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHH--TTC
T ss_pred -----CH---HH-HHHHHHCCCCEEEECCCcccc---cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHH--cCC
Confidence 12 23 334456799999999875322 23567788888888765699999999999999999776 799
Q ss_pred CeeeecHHHHhCCCchHHHHh
Q 009196 400 ASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 400 DgVMIGRgaL~nPwif~eik~ 420 (540)
|||.||++++..+..-..+++
T Consensus 237 dgvlVGsal~~a~dp~~~~~~ 257 (272)
T 3qja_A 237 DAVLVGEGLVTSGDPRAAVAD 257 (272)
T ss_dssp SEEEECHHHHTCSCHHHHHHH
T ss_pred CEEEEcHHHhCCCCHHHHHHH
Confidence 999999999988776555543
No 146
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.23 E-value=7.7e-06 Score=86.79 Aligned_cols=150 Identities=9% Similarity=0.015 Sum_probs=115.2
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcccc-ccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSC-LLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~Gsa-Ll~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
.+++.+++.|+.+. +.||..|-|+.|+|... ..|.. ...+++...++|++||+++ +++|.|....+|+ ..
T Consensus 143 ~~~e~~~~~a~~~~-~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~--~~ 215 (412)
T 4e4u_A 143 DDPDLAAECAAENV-KLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMV--PS 215 (412)
T ss_dssp SCHHHHHHHHHHHH-HHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBC--HH
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HH
Confidence 58999999888776 45999999999987531 11211 1123667788999999988 5789998888884 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++--+
T Consensus 216 ~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~d~v~~d~~ 284 (412)
T 4e4u_A 216 SAIRLAKRLEKYDPLWFE-------EPV-PPGQEEAIAQVAKHT--SIPIATGERLTTKYEFHKLLQA-GGASILQLNVA 284 (412)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CCS-CSSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHT-TCCSEECCCTT
T ss_pred HHHHHHHHhhhcCCcEEE-------CCC-ChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHHHc-CCCCEEEeCcc
Confidence 899999999999999884 332 345899999999988 7999999999999999999986 78999987544
Q ss_pred HHhCCCchHHH
Q 009196 408 ALIKPWIFTEI 418 (540)
Q Consensus 408 aL~nPwif~ei 418 (540)
-.+-..=+.+|
T Consensus 285 ~~GGit~~~ki 295 (412)
T 4e4u_A 285 RVGGLLEAKKI 295 (412)
T ss_dssp TTTSHHHHHHH
T ss_pred ccCCHHHHHHH
Confidence 44433333333
No 147
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.22 E-value=1.9e-05 Score=76.01 Aligned_cols=77 Identities=8% Similarity=-0.017 Sum_probs=59.5
Q ss_pred HHHHHHcCCcEEEEecccccCccC--CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 333 IADIGTWGASAVTVHGRTRQQRYS--KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr~q~y~--g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
+..+.+.|+|+|.+......+... .+..|+.++++++.+ ++||++.||| +++++.+++. .|+|+|++|++++.
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~--~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQ--AGADGIAVMSGIFS 197 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHH--TTCSEEEESHHHHT
T ss_pred HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHH--cCCCEEEEhHHhhC
Confidence 456678999999997642211111 245799999999887 7999999999 9999999887 79999999999988
Q ss_pred CCCc
Q 009196 411 KPWI 414 (540)
Q Consensus 411 nPwi 414 (540)
.++.
T Consensus 198 ~~d~ 201 (221)
T 1yad_A 198 SAEP 201 (221)
T ss_dssp SSSH
T ss_pred CCCH
Confidence 7653
No 148
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.20 E-value=9.9e-06 Score=80.83 Aligned_cols=159 Identities=9% Similarity=0.040 Sum_probs=101.0
Q ss_pred CeEEEEecCC--cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcc------cccc--CCchHHHHHHHHhcccc-
Q 009196 242 DLFGVQICGA--YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAG------SCLL--TKPMRMKGIIEATSGTV- 310 (540)
Q Consensus 242 ~p~~vQL~G~--~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~G------saLl--~~p~~l~eIv~av~~~v- 310 (540)
..++.=|... +.+...+.++.+. ++|+|.|||+ -|...-..+|-= .+|- -+.+.+.++++.+++.+
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~-~~G~D~IElG--~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~ 93 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVL-KNGTDILEIG--FPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP 93 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHH-HTTCSEEEEE--CCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT
T ss_pred ceEEEEecCCCCChHHHHHHHHHHH-HcCCCEEEEC--CCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC
Confidence 3344334333 4568888888887 7899999994 454321111100 0000 24567888999999888
Q ss_pred cccEEEEecCCCCCCh--hHHHHHHHHHHHcCCcEEEEeccc--------------------------ccC---------
Q 009196 311 DKPITIKVRTGYFEGK--NRIDSLIADIGTWGASAVTVHGRT--------------------------RQQ--------- 353 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~--~~~~~la~~leeaGvdaItVHgRt--------------------------r~q--------- 353 (540)
++|+.+ + ++.... .-...+++.+.++|++.++++.-. ...
T Consensus 94 ~~Pi~~-m--~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a 170 (262)
T 2ekc_A 94 DIPFLL-M--TYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAA 170 (262)
T ss_dssp TSCEEE-E--CCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHC
T ss_pred CCCEEE-E--ecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhC
Confidence 899887 2 221100 012467777778888877764311 000
Q ss_pred ----------ccCCC------c-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 354 ----------RYSKL------A-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 354 ----------~y~g~------a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
..+|. . ..++++++++.+ ++||+..|||.+++++.+ +. .+||+|+||+++...
T Consensus 171 ~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~--~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 171 DEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IG--SFADGVVVGSALVKL 240 (262)
T ss_dssp SSCEEEESSCC---------CHHHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HH--TTSSEEEECHHHHHH
T ss_pred CCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HH--cCCCEEEECHHHHhh
Confidence 01111 1 136788898887 799999999999999999 55 579999999998754
No 149
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.19 E-value=4.6e-06 Score=87.69 Aligned_cols=119 Identities=9% Similarity=0.076 Sum_probs=88.4
Q ss_pred EEecCCCCCcccccCCccccccC-CchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEeccc
Q 009196 272 IDINMGCPIDIVVNKGAGSCLLT-KPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRT 350 (540)
Q Consensus 272 IDIN~GCP~~~v~~~G~GsaLl~-~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRt 350 (540)
+|+|+|||.-.. ..+.. +++.+.++++.+++. ++|+.++++.. ...++++.+.++|+++|.+|++.
T Consensus 122 ~d~~~g~~~~~q------~~~~~~d~~~~~~~i~~~~~~-g~~v~~~v~~~------~~~e~a~~~~~agad~i~i~~~~ 188 (393)
T 2qr6_A 122 GDQAAATRTLQE------LHAAPLDTELLSERIAQVRDS-GEIVAVRVSPQ------NVREIAPIVIKAGADLLVIQGTL 188 (393)
T ss_dssp HHHHHHHHHHHH------HHHSCCCHHHHHHHHHHHHHT-TSCCEEEECTT------THHHHHHHHHHTTCSEEEEECSS
T ss_pred cCCCccchhhhh------cccccCCHHHHHHHHHHHhhc-CCeEEEEeCCc------cHHHHHHHHHHCCCCEEEEeCCc
Confidence 456777764211 11223 788889999998876 89999988752 24567888889999999999876
Q ss_pred ccCccCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 351 RQQRYSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 351 r~q~y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
..+.+..+ ..|..+.++++.+ ++|||+ |+|.|++++..+++ .|||+|+||+|.
T Consensus 189 ~~~~~~~~~~~~~~i~~l~~~~--~~pvi~-ggi~t~e~a~~~~~--~Gad~i~vg~Gg 242 (393)
T 2qr6_A 189 ISAEHVNTGGEALNLKEFIGSL--DVPVIA-GGVNDYTTALHMMR--TGAVGIIVGGGE 242 (393)
T ss_dssp CCSSCCCC-----CHHHHHHHC--SSCEEE-ECCCSHHHHHHHHT--TTCSEEEESCCS
T ss_pred cccccCCCcccHHHHHHHHHhc--CCCEEE-CCcCCHHHHHHHHH--cCCCEEEECCCc
Confidence 44445444 3788899999988 799999 89999999999775 799999999854
No 150
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.17 E-value=0.00016 Score=72.89 Aligned_cols=179 Identities=13% Similarity=0.072 Sum_probs=121.0
Q ss_pred HHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCccc
Q 009196 204 RVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIV 283 (540)
Q Consensus 204 ~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v 283 (540)
+.....||+.+- .+......+|....+..++. ..+-|+..+=+-.++.++.+| . .+|+|+|=|...+
T Consensus 86 ~~y~~~GA~~Is--Vltd~~~f~Gs~~~L~~ir~-~v~lPVl~Kdfi~d~~qi~ea----~-~~GAD~VlLi~a~----- 152 (272)
T 3tsm_A 86 KAYEEGGAACLS--VLTDTPSFQGAPEFLTAARQ-ACSLPALRKDFLFDPYQVYEA----R-SWGADCILIIMAS----- 152 (272)
T ss_dssp HHHHHTTCSEEE--EECCSTTTCCCHHHHHHHHH-TSSSCEEEESCCCSTHHHHHH----H-HTTCSEEEEETTT-----
T ss_pred HHHHHCCCCEEE--EeccccccCCCHHHHHHHHH-hcCCCEEECCccCCHHHHHHH----H-HcCCCEEEEcccc-----
Confidence 344457887651 11122333454443333332 245677666566777765443 2 5799999996432
Q ss_pred ccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHH
Q 009196 284 VNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDY 363 (540)
Q Consensus 284 ~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~ 363 (540)
+ +.+.+.++++..++ .+.-+.|-+.. ..+ +.++.+.|++.|.+.+|.-.. -..|++.
T Consensus 153 ---------L-~~~~l~~l~~~a~~-lGl~~lvevh~--------~eE-l~~A~~~ga~iIGinnr~l~t---~~~dl~~ 209 (272)
T 3tsm_A 153 ---------V-DDDLAKELEDTAFA-LGMDALIEVHD--------EAE-MERALKLSSRLLGVNNRNLRS---FEVNLAV 209 (272)
T ss_dssp ---------S-CHHHHHHHHHHHHH-TTCEEEEEECS--------HHH-HHHHTTSCCSEEEEECBCTTT---CCBCTHH
T ss_pred ---------c-CHHHHHHHHHHHHH-cCCeEEEEeCC--------HHH-HHHHHhcCCCEEEECCCCCcc---CCCChHH
Confidence 2 34567777777655 36666665532 223 355668999999999886432 2457888
Q ss_pred HHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 364 IYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 364 I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
..++.+.++.++|||+-|||.+++|+.+++. .|+|+|.||.+++..+++-..+++
T Consensus 210 ~~~L~~~ip~~~~vIaesGI~t~edv~~l~~--~Ga~gvLVG~almr~~d~~~~~~~ 264 (272)
T 3tsm_A 210 SERLAKMAPSDRLLVGESGIFTHEDCLRLEK--SGIGTFLIGESLMRQHDVAAATRA 264 (272)
T ss_dssp HHHHHHHSCTTSEEEEESSCCSHHHHHHHHT--TTCCEEEECHHHHTSSCHHHHHHH
T ss_pred HHHHHHhCCCCCcEEEECCCCCHHHHHHHHH--cCCCEEEEcHHHcCCcCHHHHHHH
Confidence 8999998876799999999999999999775 799999999999999888776654
No 151
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.17 E-value=1.1e-05 Score=85.92 Aligned_cols=164 Identities=9% Similarity=-0.008 Sum_probs=122.0
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcc------cccCCcccccc--CCchHHHHHHHHhcccc--c
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDI------VVNKGAGSCLL--TKPMRMKGIIEATSGTV--D 311 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~------v~~~G~GsaLl--~~p~~l~eIv~av~~~v--~ 311 (540)
.|+-.-+.+.+++.+++.|+.+. +.||..|-|..|++-.. .....-|..+. ...+...++|++||+++ +
T Consensus 144 v~~y~~~~~~~~e~~~~~a~~~~-~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d 222 (422)
T 3tji_A 144 IPAYSHASGETLEALFASVDALI-AQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWK 222 (422)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHH-HTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSS
T ss_pred EEEEEEeCCCCHHHHHHHHHHHH-HcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCC
Confidence 34444566788999999888776 56999999999875210 00001121111 12466788899999987 6
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNK 391 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~ 391 (540)
++|.|....+|+ ..++..+++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.+++++.+
T Consensus 223 ~~L~vDaN~~~~--~~~A~~~~~~Le~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ 290 (422)
T 3tji_A 223 LHILHDVHERLF--PQQAVQLAKQLEPFQPYFIE-------DIL-PPQQSAWLEQVRQQS--CVPLALGELFNNPAEWHD 290 (422)
T ss_dssp SEEEEECTTCSC--HHHHHHHHHHHGGGCCSEEE-------CCS-CGGGGGGHHHHHHHC--CCCEEECTTCCSGGGTHH
T ss_pred CEEEEECCCCCC--HHHHHHHHHHHHhhCCCeEE-------CCC-ChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHH
Confidence 799999988884 57899999999999999884 333 345788899999998 799999999999999999
Q ss_pred HHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 392 HKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 392 ~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
+++. ..+|.|++--+-.+-..=+.+|.
T Consensus 291 ll~~-ga~d~v~~k~~~~GGit~~~kia 317 (422)
T 3tji_A 291 LIVN-RRIDFIRCHVSQIGGITPALKLA 317 (422)
T ss_dssp HHHT-TCCSEECCCGGGGTSHHHHHHHH
T ss_pred HHhc-CCCCEEecCccccCCHHHHHHHH
Confidence 9986 78999998766665555444443
No 152
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.17 E-value=8.6e-06 Score=85.83 Aligned_cols=126 Identities=11% Similarity=0.092 Sum_probs=105.7
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
|..++.+++.|+.+. +.||..|.|+.|+ +++.-.++|++||+++ ++++.|....+|+ ..
T Consensus 153 g~~~e~~~~~a~~~~-~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~--~~ 213 (392)
T 3ddm_A 153 GINPENPEDVVARKA-AEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWD--LP 213 (392)
T ss_dssp EECSSSHHHHHHHHH-HHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCC--HH
T ss_pred cCCHHHHHHHHHHHH-HcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCC--HH
Confidence 445888888888776 4699999999874 3566788899999987 6799999999994 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcC-HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLAD-WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~ad-w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++.++++.|++.|+.+|- |.. .+.+ ++..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++-
T Consensus 214 ~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~d~v~~k 281 (392)
T 3ddm_A 214 RARQMAQRLGPAQLDWLE-------EPL-RADRPAAEWAELAQAA--PMPLAGGENIAGVAAFETALAA-RSLRVMQPD 281 (392)
T ss_dssp HHHHHHHHHGGGCCSEEE-------CCS-CTTSCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHH-TCEEEECCC
T ss_pred HHHHHHHHHHHhCCCEEE-------CCC-CccchHHHHHHHHHhc--CCCEEeCCCCCCHHHHHHHHHc-CCCCEEEeC
Confidence 899999999999999884 433 3457 99999999998 7999999999999999999886 779998874
No 153
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.16 E-value=7.4e-06 Score=78.36 Aligned_cols=152 Identities=13% Similarity=0.110 Sum_probs=95.7
Q ss_pred CCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcc--c--ccCCccccc------cCCchHHHHHHHHhccc
Q 009196 240 SEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDI--V--VNKGAGSCL------LTKPMRMKGIIEATSGT 309 (540)
Q Consensus 240 ~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~--v--~~~G~GsaL------l~~p~~l~eIv~av~~~ 309 (540)
...+++..|.+.+++.+.+.++.+. +.|++.|.|...+|... + ..+.++..+ ..+++.+...+++=.+.
T Consensus 5 ~~~~i~~~i~~~d~~~~~~~~~~~~-~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~ 83 (212)
T 2v82_A 5 TKLPLIAILRGITPDEALAHVGAVI-DAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQL 83 (212)
T ss_dssp SSSCEEEECTTCCHHHHHHHHHHHH-HHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCE
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHH-HCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCE
Confidence 4678999999999999999998887 67999999988776421 0 011111111 12333332222210000
Q ss_pred ----------------ccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCC
Q 009196 310 ----------------VDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASD 373 (540)
Q Consensus 310 ----------------v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~ 373 (540)
.+.++.+ |. .+ ..++ ....+.|+|+|.++.. .+..++.++++++.++.
T Consensus 84 V~~~~~~~~~~~~~~~~g~~~~~----g~-~t---~~e~-~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~ 147 (212)
T 2v82_A 84 IVTPNIHSEVIRRAVGYGMTVCP----GC-AT---ATEA-FTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPS 147 (212)
T ss_dssp EECSSCCHHHHHHHHHTTCEEEC----EE-CS---HHHH-HHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCT
T ss_pred EEeCCCCHHHHHHHHHcCCCEEe----ec-CC---HHHH-HHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccC
Confidence 1111111 11 11 1222 3446688888887532 12357889999887732
Q ss_pred CceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 374 DLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 374 ~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
++||++.|||. .+++.+++. .|||+|.+|++++..
T Consensus 148 ~ipvia~GGI~-~~~i~~~~~--~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 148 DIAVFAVGGVT-PENLAQWID--AGCAGAGLGSDLYRA 182 (212)
T ss_dssp TCEEEEESSCC-TTTHHHHHH--HTCSEEEECTTTCCT
T ss_pred CCeEEEeCCCC-HHHHHHHHH--cCCCEEEEChHHhCC
Confidence 39999999996 999999876 799999999998765
No 154
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.16 E-value=2.7e-05 Score=78.44 Aligned_cols=159 Identities=12% Similarity=0.094 Sum_probs=103.4
Q ss_pred CCeEEEEecCCc--HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCc------ccccc--CCchHHHHHHHHhccc-
Q 009196 241 EDLFGVQICGAY--PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGA------GSCLL--TKPMRMKGIIEATSGT- 309 (540)
Q Consensus 241 e~p~~vQL~G~~--p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~------GsaLl--~~p~~l~eIv~av~~~- 309 (540)
+..++.=|...+ .+.+.+.++.+. ++|+|.|||. -|.+.-.-+|- --+|- -+.+.+.++++.+++.
T Consensus 19 ~~ali~yi~aGdP~~~~~~~~~~~l~-~~GaD~iElG--iPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~ 95 (271)
T 3nav_A 19 QGAFVPFVTIGDPNPEQSLAIMQTLI-DAGADALELG--MPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARN 95 (271)
T ss_dssp BCEEEEEEETTSSCHHHHHHHHHHHH-HTTCSSEEEE--CCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEC--CCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC
Confidence 345665565554 588899998887 7899999995 45432222210 00111 2456788899999887
Q ss_pred ccccEEEEecCCCCCCh--hHHHHHHHHHHHcCCcEEEEec--------------------------ccc----------
Q 009196 310 VDKPITIKVRTGYFEGK--NRIDSLIADIGTWGASAVTVHG--------------------------RTR---------- 351 (540)
Q Consensus 310 v~iPVtVKiR~G~~e~~--~~~~~la~~leeaGvdaItVHg--------------------------Rtr---------- 351 (540)
.++|+.+-. +.+.. .-...|++.+.++|+|.+.+.. .|.
T Consensus 96 ~~~Pivlm~---Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~ 172 (271)
T 3nav_A 96 PETPIGLLM---YANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQL 172 (271)
T ss_dssp TTSCEEEEE---CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHH
T ss_pred CCCCEEEEe---cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHH
Confidence 789998742 21100 1235677777778888776531 110
Q ss_pred c---------CccCCCc------CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 352 Q---------QRYSKLA------DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 352 ~---------q~y~g~a------dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
. .+++|.. ..++++++++.+ ++||+..|||.+++++.+.+. .+||||.||.++.
T Consensus 173 ~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~--~gADgvIVGSAiv 241 (271)
T 3nav_A 173 GKGYTYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIE--AGAAGAISGSAVV 241 (271)
T ss_dssp CCSCEEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHH--TTCSEEEESHHHH
T ss_pred CCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHH--cCCCEEEECHHHH
Confidence 0 0122321 246788888877 799999999999999997676 6899999999876
No 155
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.16 E-value=0.00011 Score=73.34 Aligned_cols=204 Identities=12% Similarity=0.072 Sum_probs=125.7
Q ss_pred cccccCcccCCcEEEccCCCCCCH-HHHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecC-CcHH
Q 009196 177 SREKKLIDFREKLYLAPLTTVGNL-PFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICG-AYPD 254 (540)
Q Consensus 177 p~e~~~l~lknrliLAPM~~vtdl-pfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G-~~p~ 254 (540)
+..+++.+|..|+++-- ..|.+. -.+.-...-|++++..-+=-.+.--.+...-|.++. +.++...-+| .+.+
T Consensus 3 ~l~i~~~~~~srl~~Gt-gky~~~~~~~~ai~asg~eivtva~rR~~~~~~~~~~~~~~i~----~~~~lpntaG~~tae 77 (268)
T 2htm_A 3 TWKVGPVELKSRLILGS-GKYEDFGVMREAIAAAKAEVVTVSVRRVELKAPGHVGLLEALE----GVRLLPNTAGARTAE 77 (268)
T ss_dssp CEEETTEEECCSEEEEC-SSCSCHHHHHHHHHHTTCSEEEEEEEECC-------CHHHHTT----TSEEEEBCTTCCSHH
T ss_pred ceEECCEEeecceEEec-CCCCCHHHHHHHHHHhCCCEEEEEccccCCCCCCcccHHHHHh----hhhccCcccCCCCHH
Confidence 35788899999998843 234443 555556677999774322111110112223344443 4445555555 6789
Q ss_pred HHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc-c-cccEEEEecCCCCCChhHHHHH
Q 009196 255 TLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT-V-DKPITIKVRTGYFEGKNRIDSL 332 (540)
Q Consensus 255 ~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~-v-~iPVtVKiR~G~~e~~~~~~~l 332 (540)
+..++|++..+-.|-+.|-|- +..+. -.|+-|+....+-.+.+.+. . -+|++. ++ ..+
T Consensus 78 eAv~~a~lare~~gt~~iKlE-------vi~d~--~~l~pD~~~tv~aa~~L~k~Gf~Vlpy~~-------~D----~~~ 137 (268)
T 2htm_A 78 EAVRLARLGRLLTGERWVKLE-------VIPDP--TYLLPDPLETLKAAERLIEEDFLVLPYMG-------PD----LVL 137 (268)
T ss_dssp HHHHHHHHHHHHHCCSEEBCC-------CCSCT--TTTCCCHHHHHHHHHHHHHTTCEECCEEC-------SC----HHH
T ss_pred HHHHHHHhhhHhcCcceeeee-------eccCc--cccCcCHHHHHHHHHHHHHCCCEEeeccC-------CC----HHH
Confidence 999999887655577776543 11111 12555655554444444221 1 134431 12 378
Q ss_pred HHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHH-HcCCC-ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 333 IADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCAR-KASDD-LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~-~~~~~-IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
++++++.|+++|---+.- -+.-.|..+.+++..+++ .. + +|||.-|||.+++|+..+++ -|||+|+||.+...
T Consensus 138 ak~l~~~G~~aVmPlg~p-IGsG~Gi~~~~~L~~i~~~~~--~~vPVI~~GGI~tpsDAa~Ame--LGAdgVlVgSAI~~ 212 (268)
T 2htm_A 138 AKRLAALGTATVMPLAAP-IGSGWGVRTRALLELFAREKA--SLPPVVVDAGLGLPSHAAEVME--LGLDAVLVNTAIAE 212 (268)
T ss_dssp HHHHHHHTCSCBEEBSSS-TTTCCCSTTHHHHHHHHHTTT--TSSCBEEESCCCSHHHHHHHHH--TTCCEEEESHHHHT
T ss_pred HHHHHhcCCCEEEecCcc-CcCCcccCCHHHHHHHHHhcC--CCCeEEEeCCCCCHHHHHHHHH--cCCCEEEEChHHhC
Confidence 999999999999443321 111124446778999988 54 7 99999999999999999987 79999999998864
No 156
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.15 E-value=2.4e-05 Score=81.55 Aligned_cols=135 Identities=7% Similarity=0.064 Sum_probs=110.2
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
+....+...+++.+++.|+.+. +.||..|-|..|+ +++.-.+++++||+++ ++++.|....
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~-~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~ 193 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIK-KNGFEIIKVKVGG----------------SKELDVERIRMIREAAGDSITLRIDANQ 193 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred eeEEEecCCCHHHHHHHHHHHH-HcCCCeEEEEecC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 4456677788999998888776 5699999999775 2456678889999887 6789998888
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..+|
T Consensus 194 ~~~--~~~A~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~-~~~d 260 (368)
T 3q45_A 194 GWS--VETAIETLTLLEPYNIQHCE-------EPV-SRNLYTALPKIRQAC--RIPIMADESCCNSFDAERLIQI-QACD 260 (368)
T ss_dssp CBC--HHHHHHHHHHHGGGCCSCEE-------CCB-CGGGGGGHHHHHHTC--SSCEEESTTCCSHHHHHHHHHT-TCCS
T ss_pred CCC--hHHHHHHHHHHhhcCCCEEE-------CCC-ChhHHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHc-CCCC
Confidence 884 57889999999999999884 433 345788889999988 7999999999999999999986 7899
Q ss_pred eeeecHH
Q 009196 401 SCMIARG 407 (540)
Q Consensus 401 gVMIGRg 407 (540)
.|++--+
T Consensus 261 ~v~~k~~ 267 (368)
T 3q45_A 261 SFNLKLS 267 (368)
T ss_dssp EEEECTT
T ss_pred eEEechh
Confidence 9987543
No 157
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.14 E-value=2.8e-05 Score=81.16 Aligned_cols=124 Identities=11% Similarity=0.015 Sum_probs=103.5
Q ss_pred cHHHHHHHHHHHHHhC-CCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 252 YPDTLARTVELIDQQC-TVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~a-G~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
+++.+.+.|+.+. +. ||..|-|..|+| +++.-.++|+++++++ ++++.|....+|+ ..+
T Consensus 151 ~~~~~~~~a~~~~-~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~--~~~ 212 (372)
T 3tj4_A 151 TLEDLLAGSARAV-EEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAIDGNGKWD--LPT 212 (372)
T ss_dssp CHHHHHHHHHHHH-HTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCCC--HHH
T ss_pred CHHHHHHHHHHHH-HccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCC--HHH
Confidence 7888888887766 45 999999998875 2456678899999987 6789999988884 578
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++
T Consensus 213 a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~~d~v~~ 277 (372)
T 3tj4_A 213 CQRFCAAAKDLDIYWFE-------EPL-WYDDVTSHARLARNT--SIPIALGEQLYTVDAFRSFIDA-GAVAYVQP 277 (372)
T ss_dssp HHHHHHHTTTSCEEEEE-------SCS-CTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHT-TCCSEECC
T ss_pred HHHHHHHHhhcCCCEEE-------CCC-CchhHHHHHHHHhhc--CCCEEeCCCccCHHHHHHHHHc-CCCCEEEe
Confidence 89999999999988773 443 346899999999998 7999999999999999999886 78999886
No 158
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.11 E-value=3.2e-05 Score=81.39 Aligned_cols=138 Identities=13% Similarity=0.048 Sum_probs=111.1
Q ss_pred eEEEEecC---CcHHHHHHHHHHHHHhC---CCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccE
Q 009196 243 LFGVQICG---AYPDTLARTVELIDQQC---TVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPI 314 (540)
Q Consensus 243 p~~vQL~G---~~p~~~a~AA~~~~~~a---G~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPV 314 (540)
|+...+.+ .+++.+++.|+.+. +. ||..|-|..|.+ +++.-.+.|++||+++ ++++
T Consensus 159 ~~y~s~g~~~~~~~e~~~~~a~~~~-~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l 222 (390)
T 3ugv_A 159 KAYNSNGLWLKSPAEVAAEAVELKA-EGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTAL 222 (390)
T ss_dssp EEEECSCCCSSCHHHHHHHHHHHHH-TTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSEE
T ss_pred EEEEecccccCCCHHHHHHHHHHHH-HhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEE
Confidence 44444444 68899988888776 56 999999987753 3566678899999887 6789
Q ss_pred EEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHh
Q 009196 315 TIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKS 394 (540)
Q Consensus 315 tVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~ 394 (540)
.|....+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++
T Consensus 223 ~vDaN~~~~--~~~A~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~ 290 (390)
T 3ugv_A 223 MVDFNQGLD--MAEAMHRTRQIDDLGLEWIE-------EPV-VYDNFDGYAQLRHDL--KTPLMIGENFYGPREMHQALQ 290 (390)
T ss_dssp EEECTTCCC--HHHHHHHHHHHTTSCCSEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHH
T ss_pred EEECCCCCC--HHHHHHHHHHHHhhCCCEEE-------CCC-CcccHHHHHHHHHhc--CCCEEeCCCcCCHHHHHHHHH
Confidence 999988884 57889999999999999883 433 345899999999998 799999999999999999998
Q ss_pred cCCCcCeeeecHHHH
Q 009196 395 DCPELASCMIARGAL 409 (540)
Q Consensus 395 ~~~gaDgVMIGRgaL 409 (540)
. ..+|.|++--+-.
T Consensus 291 ~-~a~d~v~ik~~~~ 304 (390)
T 3ugv_A 291 A-GACDLVMPDFMRI 304 (390)
T ss_dssp T-TCCSEECCBHHHH
T ss_pred c-CCCCEEEeCcccc
Confidence 6 7899998764443
No 159
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.11 E-value=1.3e-05 Score=83.34 Aligned_cols=121 Identities=14% Similarity=0.019 Sum_probs=99.4
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
.+++.+.++|+.+. +.||+.|.|+.| |+...++|+++++++ ++++.+...-+|+ .++
T Consensus 140 ~~~~~~~~~a~~~~-~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan~~~~--~~~ 198 (368)
T 1sjd_A 140 DTIPQLLDVVGGYL-DEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDANTAYT--LGD 198 (368)
T ss_dssp SCHHHHHHHHHHHH-HHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECTTCCC--GGG
T ss_pred CCHHHHHHHHHHHH-HhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEeccCCCC--HHH
Confidence 47999999998886 569999999853 244557788888877 5788888877884 456
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.++++.|++.|+++|- |.. .+.+|+..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++
T Consensus 199 -~~~~~~l~~~~i~~iE-------~P~-~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~i 262 (368)
T 1sjd_A 199 -APQLARLDPFGLLLIE-------QPL-EEEDVLGHAELARRI--QTPICLDESIVSARAAADAIKL-GAVQIVNI 262 (368)
T ss_dssp -HHHHHTTGGGCCSEEE-------CCS-CTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHT-TCCSEEEE
T ss_pred -HHHHHHHHhcCCCeEe-------CCC-ChhhHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHc-CCCCEEEe
Confidence 8999999999999873 443 346899999999988 7999999999999999999986 78999988
No 160
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.11 E-value=3.7e-05 Score=80.11 Aligned_cols=134 Identities=8% Similarity=0.058 Sum_probs=108.3
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhC-CCCEEEecCCCCCcccccCCccccccCCch-HHHHHHHHhcccc--cccEEEE
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQC-TVDFIDINMGCPIDIVVNKGAGSCLLTKPM-RMKGIIEATSGTV--DKPITIK 317 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~a-G~D~IDIN~GCP~~~v~~~G~GsaLl~~p~-~l~eIv~av~~~v--~iPVtVK 317 (540)
.|+...+...+++.+++.|+.+. +. ||..|-|..|+. +. .-.++|++|++++ ++++.|.
T Consensus 129 v~~~~~~~~~~~~~~~~~a~~~~-~~~G~~~~K~K~g~~----------------~~~~d~~~v~avR~a~g~~~~l~vD 191 (367)
T 3dg3_A 129 MRVSHMLGFDDPVKMVAEAERIR-ETYGINTFKVKVGRR----------------PVQLDTAVVRALRERFGDAIELYVD 191 (367)
T ss_dssp EEEEEEEESSCHHHHHHHHHHHH-HHHCCCEEEEECCCS----------------STHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred EEEEEEecCCCHHHHHHHHHHHH-HhcCccEEEEeeCCC----------------hhhhHHHHHHHHHHHhCCCCEEEEE
Confidence 34556677778999988887766 45 999999987652 22 4467888888887 6789999
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP 397 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ 397 (540)
...+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.+++++.++++. .
T Consensus 192 an~~~~--~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~ 258 (367)
T 3dg3_A 192 GNRGWS--AAESLRAMREMADLDLLFAE-------ELC-PADDVLSRRRLVGQL--DMPFIADESVPTPADVTREVLG-G 258 (367)
T ss_dssp CTTCSC--HHHHHHHHHHTTTSCCSCEE-------SCS-CTTSHHHHHHHHHHC--SSCEEECTTCSSHHHHHHHHHH-T
T ss_pred CCCCCC--HHHHHHHHHHHHHhCCCEEE-------CCC-CcccHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHc-C
Confidence 888884 57889999999999999884 332 345799999999998 7999999999999999999886 7
Q ss_pred CcCeeeec
Q 009196 398 ELASCMIA 405 (540)
Q Consensus 398 gaDgVMIG 405 (540)
.+|.|++=
T Consensus 259 ~~d~v~~k 266 (367)
T 3dg3_A 259 SATAISIK 266 (367)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEee
Confidence 89999874
No 161
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.11 E-value=3.2e-05 Score=81.37 Aligned_cols=145 Identities=10% Similarity=0.035 Sum_probs=117.7
Q ss_pred eEEEEec----CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEE-
Q 009196 243 LFGVQIC----GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPIT- 315 (540)
Q Consensus 243 p~~vQL~----G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVt- 315 (540)
|+...+. +.+++.+++.|+.+. +.||..|.|++|| +++.-.++|++|++++ ++++.
T Consensus 129 ~~y~t~~~~~~~~~~e~~~~~a~~~~-~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~~ 191 (391)
T 3gd6_A 129 KVCYPIFRHRFSEEVESNLDVVRQKL-EQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIKS 191 (391)
T ss_dssp EBCEEECCCSSTTHHHHHHHHHHHHH-HTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEEE
T ss_pred EeeEEecccccCCCHHHHHHHHHHHH-HcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEEE
Confidence 4445666 678999999888776 5699999999876 2566678899999887 57888
Q ss_pred EEecCCCCCChhHHHHHHHHHHHcCC--cEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH
Q 009196 316 IKVRTGYFEGKNRIDSLIADIGTWGA--SAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK 393 (540)
Q Consensus 316 VKiR~G~~e~~~~~~~la~~leeaGv--daItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l 393 (540)
|....+| +..++.++++.|++.|+ .+|- |.. .+.+|+..+++++.+ ++|| .+.+.+++++.+++
T Consensus 192 vDan~~~--~~~~A~~~~~~l~~~~i~~~~iE-------qP~-~~~d~~~~~~l~~~~--~iPI--dE~~~~~~~~~~~~ 257 (391)
T 3gd6_A 192 YDFSHLL--NWKDAHRAIKRLTKYDLGLEMIE-------SPA-PRNDFDGLYQLRLKT--DYPI--SEHVWSFKQQQEMI 257 (391)
T ss_dssp EECTTCS--CHHHHHHHHHHHTTCCSSCCEEE-------CCS-CTTCHHHHHHHHHHC--SSCE--EEECCCHHHHHHHH
T ss_pred ecCCCCc--CHHHHHHHHHHHHhcCCCcceec-------CCC-ChhhHHHHHHHHHHc--CCCc--CCCCCCHHHHHHHH
Confidence 8888888 45789999999999999 7774 333 345899999999998 6999 88999999999999
Q ss_pred hcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 394 SDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 394 ~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
+. ..+|.|++--+-++...-+.++.
T Consensus 258 ~~-~~~d~v~~k~~~~GGit~~~~ia 282 (391)
T 3gd6_A 258 KK-DAIDIFNISPVFIGGLTSAKKAA 282 (391)
T ss_dssp HH-TCCSEEEECHHHHTSHHHHHHHH
T ss_pred Hc-CCCCEEEECchhcCCHHHHHHHH
Confidence 86 78999999988877766555554
No 162
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.09 E-value=5.7e-05 Score=79.34 Aligned_cols=135 Identities=7% Similarity=-0.035 Sum_probs=109.2
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhC-CCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEe
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQC-TVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKV 318 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~a-G~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKi 318 (540)
.|+...+...+++.+++.|+.+. +. ||..|-|..|++ +++.-.+.|+++|+++ ++++.|..
T Consensus 157 v~~y~s~g~~~~e~~~~~a~~~~-~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDa 220 (383)
T 3toy_A 157 IPAYDSYGVLDARDDERTLRTAC-DEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDF 220 (383)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHH-HTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eEEeEecCCCCHHHHHHHHHHHH-HccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 34444444468999988888776 45 999999987753 3566678899999887 67899999
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
..+|+ ..++.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..
T Consensus 221 N~~~~--~~~A~~~~~~l~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a 287 (383)
T 3toy_A 221 NQSLD--PAEATRRIARLADYDLTWIE-------EPV-PQENLSGHAAVRERS--EIPIQAGENWWFPRGFAEAIAA-GA 287 (383)
T ss_dssp TTCSC--HHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHHH-TC
T ss_pred CCCCC--HHHHHHHHHHHHhhCCCEEE-------CCC-CcchHHHHHHHHhhc--CCCEEeCCCcCCHHHHHHHHHc-CC
Confidence 88984 57889999999999999883 433 345899999999998 7999999999999999999986 77
Q ss_pred cCeeeec
Q 009196 399 LASCMIA 405 (540)
Q Consensus 399 aDgVMIG 405 (540)
+|.|++-
T Consensus 288 ~d~v~ik 294 (383)
T 3toy_A 288 SDFIMPD 294 (383)
T ss_dssp CSEECCC
T ss_pred CCEEEeC
Confidence 9998754
No 163
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.07 E-value=7.3e-05 Score=77.90 Aligned_cols=135 Identities=10% Similarity=0.152 Sum_probs=105.9
Q ss_pred eEEEEecCCcH-HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEec
Q 009196 243 LFGVQICGAYP-DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVR 319 (540)
Q Consensus 243 p~~vQL~G~~p-~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR 319 (540)
|+..-+...++ +.+.++++.+. +.||..|-|..|+. +++.-.+.+++|++++ ++++.|...
T Consensus 133 ~~~~t~~~~~~~~~~~~~~~~~~-~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan 196 (370)
T 1chr_A 133 PIAWTLASGDTKRDLDSAVEMIE-RRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVN 196 (370)
T ss_dssp EBEEEECSSSHHHHHHHHHHHHH-TTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEECT
T ss_pred eEEEEecCCCcHHHHHHHHHHHH-HCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence 33334444444 45666666665 46999999987752 3566678899999988 479999999
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.+|+ ..++.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..+
T Consensus 197 ~~~~--~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~--~iPia~dE~~~~~~~~~~~~~~-~~~ 263 (370)
T 1chr_A 197 QAWD--EQVASVYIPELEALGVELIE-------QPV-GRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARD-RSV 263 (370)
T ss_dssp TCCC--TTHHHHHTHHHHTTTEEEEE-------CCS-CTTCHHHHHHHHHHS--CSEEEESSSCCSHHHHHHHHTT-TSC
T ss_pred CCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHc-CCC
Confidence 9996 46789999999999988873 443 346899999999998 7999999999999999999886 789
Q ss_pred CeeeecH
Q 009196 400 ASCMIAR 406 (540)
Q Consensus 400 DgVMIGR 406 (540)
|.|++--
T Consensus 264 d~v~~k~ 270 (370)
T 1chr_A 264 DVFSLKL 270 (370)
T ss_dssp SEEEECT
T ss_pred CEEEECc
Confidence 9999753
No 164
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.05 E-value=4.9e-05 Score=79.43 Aligned_cols=140 Identities=9% Similarity=0.070 Sum_probs=110.7
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+...+...+++.+.+.|+.+. +.||..|-|..|+. .++.-.+++++|++++ ++++.|....
T Consensus 137 ~~~~t~~~~~~~~~~~~a~~~~-~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 200 (377)
T 3my9_A 137 PLSFSIADPDFDADLERMRAMV-PAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFNQ 200 (377)
T ss_dssp EBCEEECCSSHHHHHHHHHHHT-TTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred EEEEecCCCCHHHHHHHHHHHH-HcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 4444555668888877776665 45999999987752 3456677889999887 6799999999
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+|+ ..++.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..+|
T Consensus 201 ~~~--~~~A~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~~d 267 (377)
T 3my9_A 201 ALT--PFGAMKILRDVDAFRPTFIE-------QPV-PRRHLDAMAGFAAAL--DTPILADESCFDAVDLMEVVRR-QAAD 267 (377)
T ss_dssp CCC--TTTHHHHHHHHHTTCCSCEE-------CCS-CTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHH-TCCS
T ss_pred CcC--HHHHHHHHHHHhhcCCCEEE-------CCC-CccCHHHHHHHHHhC--CCCEEECCccCCHHHHHHHHHc-CCCC
Confidence 996 46788999999999999883 432 346899999999998 7999999999999999999986 7899
Q ss_pred eeeecHHHHhC
Q 009196 401 SCMIARGALIK 411 (540)
Q Consensus 401 gVMIGRgaL~n 411 (540)
.|++--+-.+-
T Consensus 268 ~v~~k~~~~GG 278 (377)
T 3my9_A 268 AISVKIMKCGG 278 (377)
T ss_dssp EEECCHHHHTS
T ss_pred EEEecccccCC
Confidence 99986554443
No 165
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.04 E-value=2.6e-05 Score=84.80 Aligned_cols=124 Identities=14% Similarity=0.038 Sum_probs=85.5
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-c-ccEEEEecCCCCCChhHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-D-KPITIKVRTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~-iPVtVKiR~G~~e~~~~~~~la~~le 337 (540)
++.+. +.|++.|-+.... | ++..+.+.++.+++.. + +||.++-... .+-++.+.
T Consensus 247 ~~~l~-e~gv~~l~Vd~~~--------g-------~~~~~~~~i~~lk~~~~~~~~Vi~G~V~t--------~~~a~~l~ 302 (503)
T 1me8_A 247 VPALV-EAGADVLCIDSSD--------G-------FSEWQKITIGWIREKYGDKVKVGAGNIVD--------GEGFRYLA 302 (503)
T ss_dssp HHHHH-HHTCSEEEECCSC--------C-------CSHHHHHHHHHHHHHHGGGSCEEEEEECS--------HHHHHHHH
T ss_pred HHHHH-hhhccceEEeccc--------C-------cccchhhHHHHHHHhCCCCceEeeccccC--------HHHHHHHH
Confidence 44554 3588988775431 1 1233555667777766 5 8888866542 24577888
Q ss_pred HcCCcEEEEeccc-------ccCccCCCcCHHHHHHHHHHcCC-------CceEEEeCCCCCHHHHHHHHhcCCCcCeee
Q 009196 338 TWGASAVTVHGRT-------RQQRYSKLADWDYIYQCARKASD-------DLQVLGNGDIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 338 eaGvdaItVHgRt-------r~q~y~g~adw~~I~~i~~~~~~-------~IPVIgNGdI~s~eDa~~~l~~~~gaDgVM 403 (540)
++|+++|.| |.. +...-.+.+....+.++.+.+.. .+|||+.|||.++.|+.+++. .|||+||
T Consensus 303 ~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAla--lGA~~V~ 379 (503)
T 1me8_A 303 DAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA--MGADFIM 379 (503)
T ss_dssp HHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH--TTCSEEE
T ss_pred HhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHH--cCCCEEE
Confidence 999999988 432 11111234566777777655421 399999999999999999998 7999999
Q ss_pred ecHHHHh
Q 009196 404 IARGALI 410 (540)
Q Consensus 404 IGRgaL~ 410 (540)
+||.++.
T Consensus 380 iG~~~~~ 386 (503)
T 1me8_A 380 LGRYFAR 386 (503)
T ss_dssp ESHHHHT
T ss_pred ECchhhc
Confidence 9999875
No 166
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=98.04 E-value=2e-05 Score=94.15 Aligned_cols=108 Identities=13% Similarity=0.103 Sum_probs=82.4
Q ss_pred chHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCc--------cCCCcCHHHHHH
Q 009196 296 PMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQR--------YSKLADWDYIYQ 366 (540)
Q Consensus 296 p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~--------y~g~adw~~I~~ 366 (540)
++-+.++++.+++.. ++||.||+-.+. .....|..+.++|||+|+|.|.....+ +.+.+-...+.+
T Consensus 977 ~edl~~~I~~Lk~~~~~~PV~VKlv~~~-----gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~e 1051 (1479)
T 1ea0_A 977 IEDLAQLIYDLKQINPDAKVTVKLVSRS-----GIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSE 1051 (1479)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECCT-----THHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCC-----ChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHH
Confidence 456778999999988 889999997642 234468889999999999976532111 123233355667
Q ss_pred HHHHc-----CCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 367 CARKA-----SDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 367 i~~~~-----~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
+.+.+ ..++|||+.|||.+..|+.+++. .|||+|++||++|.
T Consensus 1052 v~~al~~~glr~~VpVIAdGGIrtG~DVakALa--LGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1052 VHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAM--LGAEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHH--TTCSEEECCHHHHH
T ss_pred HHHHHHHcCCCCCceEEEECCCCCHHHHHHHHH--cCCCeeeEcHHHHH
Confidence 76653 23699999999999999999998 79999999999986
No 167
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.03 E-value=4.5e-05 Score=81.20 Aligned_cols=152 Identities=7% Similarity=-0.077 Sum_probs=113.9
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcccc---cc-----------------CCchHHHH
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSC---LL-----------------TKPMRMKG 301 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~Gsa---Ll-----------------~~p~~l~e 301 (540)
.|+-.-+.+.+++.+++.|+.+. +.||..|-|..|.|.... .+|.. .- +..+...+
T Consensus 140 v~~y~~~~~~~~e~~~~~a~~~~-~~Gf~~iKlKvg~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 215 (425)
T 3vcn_A 140 VTVYGHANGETIEDTIAEAVKYK-AMGYKAIRLQTGVPGLAS---TYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPK 215 (425)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHH-HTTCSEEEEEECCTTCSC---CTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeecCccccc---cccccccccccCcccccccccccccchhHHHHHHH
Confidence 34444556788999999888776 569999999988753110 11100 00 00245577
Q ss_pred HHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 302 IIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 302 Iv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+|++||+++ +++|.|....+|+ ..++.++++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++
T Consensus 216 ~v~avR~a~G~d~~l~vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~ 283 (425)
T 3vcn_A 216 LFERAREVLGWDVHLLHDVHHRLT--PIEAARLGKDLEPYRLFWLE-------DSV-PAENQAGFRLIRQHT--TTPLAV 283 (425)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCC--HHHHHHHHHHHGGGCCSEEE-------CCS-CCSSTTHHHHHHHHC--CSCEEE
T ss_pred HHHHHHHHcCCCCEEEEECCCCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-ChhhHHHHHHHHhcC--CCCEEe
Confidence 889999887 6799998888884 57899999999999999884 333 345788899999998 799999
Q ss_pred eCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 380 NGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 380 NGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
.+.+.+++++.++++. ..+|.|++--+-++
T Consensus 284 dE~~~~~~~~~~~i~~-~a~d~v~~k~~~~G 313 (425)
T 3vcn_A 284 GEIFAHVWDAKQLIEE-QLIDYLRATVLHAG 313 (425)
T ss_dssp CTTCCSGGGTHHHHHT-TCCSEECCCTTTTT
T ss_pred CCCcCCHHHHHHHHHc-CCCCeEecChhhcC
Confidence 9999999999999986 78999987644433
No 168
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.03 E-value=6e-05 Score=80.20 Aligned_cols=153 Identities=10% Similarity=-0.060 Sum_probs=115.7
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcccc------------c--------cCCchHHHH
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSC------------L--------LTKPMRMKG 301 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~Gsa------------L--------l~~p~~l~e 301 (540)
.|+-.-+.+.+++++++.|+.+. +.||..|-|..|-|.... .+|.. . -.+.+...+
T Consensus 139 v~~y~~~~~~~~e~~~~~a~~~~-~~Gf~~iKlKvG~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e 214 (424)
T 3v3w_A 139 ILSYTHANGKDLDSTLEAVRKAK-DKGYKAIRVQCGIPGIAK---TYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPD 214 (424)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHH-HTTCSEEEEEECCTTCSC---CTTCC-----CCSCCBSSCCEEEECHHHHHHHHHH
T ss_pred eeEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeccCccccc---cccccccccccccccccccccccccchhHHHHHHH
Confidence 34444556788999999888776 569999999988753110 11110 0 011456788
Q ss_pred HHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 302 IIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 302 Iv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+|++||+++ +++|.|....+|+ ..++..+++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++
T Consensus 215 ~v~avR~avG~d~~l~vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~ 282 (424)
T 3v3w_A 215 VFAAVRKEFGPDIHLLHDVHHRLT--PIEAARLGKALEPYHLFWME-------DAV-PAENQESFKLIRQHT--TTPLAV 282 (424)
T ss_dssp HHHHHHHHHCSSSEEEEECTTCCC--HHHHHHHHHHHGGGCCSEEE-------CCS-CCSSTTHHHHHHHHC--CSCEEE
T ss_pred HHHHHHHHcCCCCcEEEeCCCCCC--HHHHHHHHHHHHhcCCCEEE-------CCC-ChHhHHHHHHHHhhC--CCCEEE
Confidence 999999988 6799998888884 57899999999999999884 333 345788899999998 799999
Q ss_pred eCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 380 NGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 380 NGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
.+.+.++.++.++++. ..+|.|++--+-++-
T Consensus 283 dE~~~~~~~~~~~i~~-ga~d~v~~k~~~~GG 313 (424)
T 3v3w_A 283 GEVFNSIHDCRELIQN-QWIDYIRTTIVHAGG 313 (424)
T ss_dssp CTTCCSGGGTHHHHHT-TCCSEECCCTTTTTH
T ss_pred ccCcCCHHHHHHHHHc-CCCCeEeecchhcCC
Confidence 9999999999999986 789999876444433
No 169
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.02 E-value=0.00015 Score=72.08 Aligned_cols=179 Identities=10% Similarity=0.018 Sum_probs=113.3
Q ss_pred HHHHHHHhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc
Q 009196 202 FRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPID 281 (540)
Q Consensus 202 fR~l~~~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~ 281 (540)
+.+.....||..+- .+......+|.......++. ...-|+..+=+=.++.++.. +. .+|+|+|=|.
T Consensus 70 ~A~~~~~~GA~~is--vlt~~~~f~G~~~~l~~i~~-~v~lPvl~kdfI~d~~qi~~----a~-~~GAD~VlL~------ 135 (254)
T 1vc4_A 70 AALAYARGGARAVS--VLTEPHRFGGSLLDLKRVRE-AVDLPLLRKDFVVDPFMLEE----AR-AFGASAALLI------ 135 (254)
T ss_dssp HHHHHHHTTCSEEE--EECCCSSSCCCHHHHHHHHH-HCCSCEEEESCCCSHHHHHH----HH-HTTCSEEEEE------
T ss_pred HHHHHHHcCCCEEE--EecchhhhccCHHHHHHHHH-hcCCCEEECCcCCCHHHHHH----HH-HcCCCEEEEC------
Confidence 34444567888651 12222334445444444433 34556655444466665433 22 5799999984
Q ss_pred ccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCH
Q 009196 282 IVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADW 361 (540)
Q Consensus 282 ~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw 361 (540)
.+.+. +.+.++++..+. .++.+.|-+. +| .+ +..+.+.|++.|.++.|.-. +-..++
T Consensus 136 --------~~~l~--~~l~~l~~~a~~-lGl~~lvev~-~~-------~E-~~~a~~~gad~IGvn~~~l~---~~~~dl 192 (254)
T 1vc4_A 136 --------VALLG--ELTGAYLEEARR-LGLEALVEVH-TE-------RE-LEIALEAGAEVLGINNRDLA---TLHINL 192 (254)
T ss_dssp --------HHHHG--GGHHHHHHHHHH-HTCEEEEEEC-SH-------HH-HHHHHHHTCSEEEEESBCTT---TCCBCT
T ss_pred --------ccchH--HHHHHHHHHHHH-CCCeEEEEEC-CH-------HH-HHHHHHcCCCEEEEccccCc---CCCCCH
Confidence 33333 566677665443 3433333332 11 23 23667789999999988633 224577
Q ss_pred HHHHHHHHHcCC---CceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 362 DYIYQCARKASD---DLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 362 ~~I~~i~~~~~~---~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+.+.++++.++. ++|+|+.|||.|++|+.+++ . |+|+|.||++++..+++-..+++
T Consensus 193 ~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~--~-Ga~gvlVGsAl~~~~d~~~~~~~ 251 (254)
T 1vc4_A 193 ETAPRLGRLARKRGFGGVLVAESGYSRKEELKALE--G-LFDAVLIGTSLMRAPDLEAALRE 251 (254)
T ss_dssp THHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTT--T-TCSEEEECHHHHTSSCHHHHHHH
T ss_pred HHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHH--c-CCCEEEEeHHHcCCCCHHHHHHH
Confidence 777888777643 58999999999999999854 3 99999999999999988776654
No 170
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.00 E-value=7.8e-05 Score=78.31 Aligned_cols=145 Identities=12% Similarity=0.004 Sum_probs=116.4
Q ss_pred CCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEE
Q 009196 240 SEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIK 317 (540)
Q Consensus 240 ~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVK 317 (540)
...|+...+...+++.+++.|+.+. +.||..|-|..|||.. ..+++.-.+.|++||+++ ++++.|.
T Consensus 133 ~~v~~y~s~~~~~~e~~~~~a~~~~-~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vD 200 (386)
T 3fv9_G 133 GPVPVISSIGGDTPEAMRAKVARHR-AQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLAD 200 (386)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHH-HTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CceeeeEecCCCCHHHHHHHHHHHH-HCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 3456777788889999998888776 5699999999998732 124677788999999998 5789999
Q ss_pred ecCCCCCChhHHHHHHHHH-HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcC
Q 009196 318 VRTGYFEGKNRIDSLIADI-GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDC 396 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~l-eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~ 396 (540)
...+|+ ..++.++++.| ++.++ +| +|.. ++|+..+++++.+ ++||.+...+.+..++.++++.
T Consensus 201 aN~~~~--~~~A~~~~~~l~~~~~i-~i-------EeP~---~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~- 264 (386)
T 3fv9_G 201 ANNGLT--VEHALRMLSLLPPGLDI-VL-------EAPC---ASWAETKSLRARC--ALPLLLDELIQTETDLIAAIRD- 264 (386)
T ss_dssp CTTCCC--HHHHHHHHHHSCSSCCC-EE-------ECCC---SSHHHHHHHHTTC--CSCEEESTTCCSHHHHHHHHHT-
T ss_pred CCCCCC--HHHHHHHHHHhhccCCc-EE-------ecCC---CCHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHh-
Confidence 998984 57888999999 76776 55 3433 3899999999988 7999999999999999999986
Q ss_pred CCcCeeeecHHHHhCC
Q 009196 397 PELASCMIARGALIKP 412 (540)
Q Consensus 397 ~gaDgVMIGRgaL~nP 412 (540)
..+|.|++--+-.+-.
T Consensus 265 ~a~d~v~~k~~~~GGi 280 (386)
T 3fv9_G 265 DLCDGVGLKVSKQGGI 280 (386)
T ss_dssp TCCSEEEEEHHHHTSH
T ss_pred CCCCEEEECccccCCH
Confidence 7899999876555443
No 171
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.00 E-value=4.3e-05 Score=75.67 Aligned_cols=143 Identities=9% Similarity=0.088 Sum_probs=96.4
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEE------ecCCCCC------C
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIK------VRTGYFE------G 325 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVK------iR~G~~e------~ 325 (540)
++++.+. ++|+|.|+|-. +.--+.+.+.++++++|+ .++|+.+= +-.|.+- .
T Consensus 24 ~~~~~l~-~~GaD~ielG~--------------S~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G~dg~iiPdLp 87 (240)
T 1viz_A 24 EQLEILC-ESGTDAVIIGG--------------SDGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPGFDLYFIPSVL 87 (240)
T ss_dssp HHHHHHH-TSCCSEEEECC------------------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSCCSEEEEEEET
T ss_pred HHHHHHH-HcCCCEEEECC--------------CCCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCCCCEEEEcccC
Confidence 3455555 78999999965 122357789999999998 78998862 1223211 0
Q ss_pred hhHHHHH-----HHHHHHcC-----CcEEE----E-ecccc-----cC---------------------c--c---CC-C
Q 009196 326 KNRIDSL-----IADIGTWG-----ASAVT----V-HGRTR-----QQ---------------------R--Y---SK-L 358 (540)
Q Consensus 326 ~~~~~~l-----a~~leeaG-----vdaIt----V-HgRtr-----~q---------------------~--y---~g-~ 358 (540)
.++...+ ...+.+.| .+.|. | .+.+. .. . | +| .
T Consensus 88 ~ee~~~~~~g~~~~a~~~~g~~~~~l~~i~~gy~l~~P~~~~~rl~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~s~G~~ 167 (240)
T 1viz_A 88 NSKNADWIVGMHQKAMKEYGELMSMEEIVAEGYCIANPDCKAAALTEADADLNMDDIVAYARVSELLQLPIFYLEYSGVL 167 (240)
T ss_dssp TBSSGGGTTHHHHHHHHHCHHHHHHSCEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCSEEEEECTTSC
T ss_pred cccChhhhcchhHHHHHHcCCCCcceeeeecccEEECCCCceEEeeccCCCCCHHHHHHHHHhCcccCCCEEEEeCCCcc
Confidence 0112233 45567778 77765 3 11110 00 0 1 11 3
Q ss_pred cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC-chHHHHh
Q 009196 359 ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW-IFTEIKE 420 (540)
Q Consensus 359 adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw-if~eik~ 420 (540)
.+.++++++++.+. ++||+.-|||+|++++.+++. |||+|.||.++..+|. ++++++.
T Consensus 168 ~~~~~i~~i~~~~~-~~Pv~vGgGI~t~e~a~~~~~---gAd~VIVGSa~v~~~~~~~~~v~~ 226 (240)
T 1viz_A 168 GDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYAE---HADVIVVGNAVYEDFDRALKTVAA 226 (240)
T ss_dssp CCHHHHHHHHHTCS-SSEEEEESSCCSHHHHHHHHT---TCSEEEECTHHHHCHHHHHTHHHH
T ss_pred ChHHHHHHHHHhcC-CCCEEEEeccCCHHHHHHHHh---CCCEEEEChHHHhCHHHHHHHHHH
Confidence 46889999999873 599999999999999999653 8999999999999999 8888764
No 172
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=97.98 E-value=2.4e-05 Score=75.46 Aligned_cols=145 Identities=12% Similarity=0.044 Sum_probs=97.8
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCccc---------ccCCccccccCCchHHH------------
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIV---------VNKGAGSCLLTKPMRMK------------ 300 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v---------~~~G~GsaLl~~p~~l~------------ 300 (540)
.+++.-|-+.+++++.+.++.+. ..|++.|++.+-+|.... ...|+|. ++ ..+.+.
T Consensus 13 ~~ii~vi~~~~~~~~~~~~~~l~-~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~ 89 (207)
T 2yw3_A 13 SRLLPLLTVRGGEDLLGLARVLE-EEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVS 89 (207)
T ss_dssp HCEEEEECCCSCCCHHHHHHHHH-HTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH-HcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEc
Confidence 35777788888888888888777 679999999988874311 1134554 33 223332
Q ss_pred -----HHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCC
Q 009196 301 -----GIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDD 374 (540)
Q Consensus 301 -----eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~ 374 (540)
++++..+. .++|+.+.+. + ..+ +..+.+.|+|+|.+|+- ... ..++++.++..++ +
T Consensus 90 ~~~d~~v~~~~~~-~g~~~i~G~~-----t---~~e-~~~A~~~Gad~v~~fpa-------~~~gG~~~lk~l~~~~~-~ 151 (207)
T 2yw3_A 90 PGLLEEVAALAQA-RGVPYLPGVL-----T---PTE-VERALALGLSALKFFPA-------EPFQGVRVLRAYAEVFP-E 151 (207)
T ss_dssp SSCCHHHHHHHHH-HTCCEEEEEC-----S---HHH-HHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHHHCT-T
T ss_pred CCCCHHHHHHHHH-hCCCEEecCC-----C---HHH-HHHHHHCCCCEEEEecC-------ccccCHHHHHHHHhhCC-C
Confidence 23333332 3455544321 1 223 34456789999999751 111 3578999998886 7
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
+||++.|||. .+++.+++. .|+++|.+|++++.
T Consensus 152 ipvvaiGGI~-~~n~~~~l~--aGa~~vavgSai~~ 184 (207)
T 2yw3_A 152 VRFLPTGGIK-EEHLPHYAA--LPNLLAVGGSWLLQ 184 (207)
T ss_dssp CEEEEBSSCC-GGGHHHHHT--CSSBSCEEESGGGS
T ss_pred CcEEEeCCCC-HHHHHHHHh--CCCcEEEEehhhhC
Confidence 9999999995 799999886 79999999998765
No 173
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=97.96 E-value=0.00023 Score=71.13 Aligned_cols=133 Identities=14% Similarity=0.109 Sum_probs=89.1
Q ss_pred HHHHHHhCCCCEEEecC--CCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEecC-CCC----CChhHH
Q 009196 260 VELIDQQCTVDFIDINM--GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVRT-GYF----EGKNRI 329 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~--GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR~-G~~----e~~~~~ 329 (540)
++.+. +.|+|+|++.. |. .+.+.+.+-++++++.+ ++||.+=..+ |.+ .+.+..
T Consensus 98 ve~Ai-~~Ga~~v~~~~nig~---------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i 161 (263)
T 1w8s_A 98 VEEAV-SLGASAVGYTIYPGS---------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIV 161 (263)
T ss_dssp HHHHH-HTTCSEEEEEECTTS---------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHH
T ss_pred HHHHH-HCCCCEEEEEEecCC---------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHH
Confidence 33344 46999999853 41 12233444444444332 7788765433 110 023445
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC--CHHHHHHHHh---cCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY--SYLDWNKHKS---DCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~--s~eDa~~~l~---~~~gaDgVMI 404 (540)
...++...+.|+|+|-+. |. .+.+.++++++.++ .+||++.|||. +.+++.+++. + .||+|+.+
T Consensus 162 ~~a~~~a~~~GAD~vkt~-------~~--~~~e~~~~~~~~~~-~~pV~asGGi~~~~~~~~l~~i~~~~~-aGA~Gvsv 230 (263)
T 1w8s_A 162 AYAARIALELGADAMKIK-------YT--GDPKTFSWAVKVAG-KVPVLMSGGPKTKTEEDFLKQVEGVLE-AGALGIAV 230 (263)
T ss_dssp HHHHHHHHHHTCSEEEEE-------CC--SSHHHHHHHHHHTT-TSCEEEECCSCCSSHHHHHHHHHHHHH-TTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEEc-------CC--CCHHHHHHHHHhCC-CCeEEEEeCCCCCCHHHHHHHHHHHHH-cCCeEEEE
Confidence 555688899999999876 11 25688899998883 34999999999 9999988773 3 79999999
Q ss_pred cHHHHhCCCchHHHH
Q 009196 405 ARGALIKPWIFTEIK 419 (540)
Q Consensus 405 GRgaL~nPwif~eik 419 (540)
||.++..|.....++
T Consensus 231 graI~~~~dp~~~~~ 245 (263)
T 1w8s_A 231 GRNVWQRRDALKFAR 245 (263)
T ss_dssp SHHHHTSTTHHHHHH
T ss_pred ehhhcCCcCHHHHHH
Confidence 999999887654443
No 174
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=97.95 E-value=0.0001 Score=72.91 Aligned_cols=189 Identities=15% Similarity=0.099 Sum_probs=116.8
Q ss_pred EEccCCCCCCHHHHHHHH---HhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec---CC-cHHHHHHHHHH
Q 009196 190 YLAPLTTVGNLPFRRVCK---VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC---GA-YPDTLARTVEL 262 (540)
Q Consensus 190 iLAPM~~vtdlpfR~l~~---~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~---G~-~p~~~a~AA~~ 262 (540)
+|.|.. |..-.+++|. +||+.-+|.--..+.. -...++ .++..+..=+. |. ..+.-+.-++.
T Consensus 35 lL~p~~--t~~~i~~lc~eA~~~~~~aVcV~p~~v~~-------a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~ 103 (239)
T 3ngj_A 35 LLKADA--TEEQIRKLCSEAAEYKFASVCVNPTWVPL-------CAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKV 103 (239)
T ss_dssp ECCTTC--CHHHHHHHHHHHHHHTCSEEEECGGGHHH-------HHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred cCCCCC--CHHHHHHHHHHHHhcCCcEEEECHHHHHH-------HHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHH
Confidence 477744 4555678875 4798766532211111 001121 12222322121 22 33433434444
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEe--cCCCCCChhHHHHHHHHHHHcC
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKV--RTGYFEGKNRIDSLIADIGTWG 340 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKi--R~G~~e~~~~~~~la~~leeaG 340 (540)
+. +.|+|.||+.+ .+|..+..+.+.+.+-+++++++++- ..+|+ -.+.- +.++....++...++|
T Consensus 104 Ai-~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~a~~ia~~aG 170 (239)
T 3ngj_A 104 AV-EQGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYL-TNEEKVEVCKRCVAAG 170 (239)
T ss_dssp HH-HTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGS-CHHHHHHHHHHHHHHT
T ss_pred HH-HcCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCC-CHHHHHHHHHHHHHHC
Confidence 44 45999999863 23444455778888888888877741 24443 33432 3456777778889999
Q ss_pred CcEEEEecccccCcc-CCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC--eeeecHHHH
Q 009196 341 ASAVTVHGRTRQQRY-SKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA--SCMIARGAL 409 (540)
Q Consensus 341 vdaItVHgRtr~q~y-~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD--gVMIGRgaL 409 (540)
+|+|-.+. +| .+.+..+.++.+++.++.+++|.++|||.+++|+.++++ .||+ |+..|+.++
T Consensus 171 ADfVKTST-----Gf~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i~--aGA~riGtS~~~~I~ 235 (239)
T 3ngj_A 171 AEYVKTST-----GFGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMIN--NGASRIGASAGIAIL 235 (239)
T ss_dssp CSEEECCC-----SSSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHHH--TTEEEEEESCHHHHH
T ss_pred cCEEECCC-----CCCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHHH--hcccceecccHHHHH
Confidence 99997642 22 255777888888877766799999999999999999997 7999 555555554
No 175
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=97.94 E-value=0.00011 Score=72.10 Aligned_cols=153 Identities=11% Similarity=0.056 Sum_probs=106.1
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCC--EEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc--ccccEEEE
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVD--FIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT--VDKPITIK 317 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D--~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~--v~iPVtVK 317 (540)
..+...|...+...+.++.+.+. ++|+| .||+--|.=+++. .+| | .+++++++. .++|+.|+
T Consensus 5 ~~i~psil~~D~~~l~~~i~~l~-~~g~d~~h~DVmDg~Fvpn~---~~G------~----~~v~~ir~~~~~~~~~dvh 70 (228)
T 3ovp_A 5 CKIGPSILNSDLANLGAECLRML-DSGADYLHLDVMDGHFVPNI---TFG------H----PVVESLRKQLGQDPFFDMH 70 (228)
T ss_dssp CEEEEBCTTSCGGGHHHHHHHHH-HTTCSCEEEEEEBSSSSSCB---CBC------H----HHHHHHHHHHCSSSCEEEE
T ss_pred cEeeeeheeCCchhHHHHHHHHH-HcCCCEEEEEecCCCcCccc---ccC------H----HHHHHHHHhhCCCCcEEEE
Confidence 34677888889889999999987 68888 5666555433333 234 2 467777776 47888887
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEeccc---------------------------------------------cc
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRT---------------------------------------------RQ 352 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRt---------------------------------------------r~ 352 (540)
+=.. +. ..+++.+.++|+|.||+|.-. ..
T Consensus 71 Lmv~---~p---~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~ 144 (228)
T 3ovp_A 71 MMVS---KP---EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVE 144 (228)
T ss_dssp EECS---CG---GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSC
T ss_pred EEeC---CH---HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeec
Confidence 7652 22 245677788999999999631 00
Q ss_pred CccCCC----cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 353 QRYSKL----ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 353 q~y~g~----adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
.++.|. ..++.++++++..+ ++||...||| +++.+.++++ .|||.+.+||++...+..-..+
T Consensus 145 pGf~Gq~f~~~~l~ki~~lr~~~~-~~~I~VdGGI-~~~t~~~~~~--aGAd~~VvGsaIf~a~dp~~~~ 210 (228)
T 3ovp_A 145 PGFGGQKFMEDMMPKVHWLRTQFP-SLDIEVDGGV-GPDTVHKCAE--AGANMIVSGSAIMRSEDPRSVI 210 (228)
T ss_dssp TTTCSCCCCGGGHHHHHHHHHHCT-TCEEEEESSC-STTTHHHHHH--HTCCEEEESHHHHTCSCHHHHH
T ss_pred CCCCCcccCHHHHHHHHHHHHhcC-CCCEEEeCCc-CHHHHHHHHH--cCCCEEEEeHHHhCCCCHHHHH
Confidence 112221 23566788888765 6999999999 5899988776 7999999999988766544333
No 176
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.94 E-value=0.00016 Score=72.33 Aligned_cols=191 Identities=15% Similarity=0.062 Sum_probs=118.5
Q ss_pred EEccCCCCCCHHHHHHHH---HhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec---CC-cHHHHHHHHHH
Q 009196 190 YLAPLTTVGNLPFRRVCK---VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC---GA-YPDTLARTVEL 262 (540)
Q Consensus 190 iLAPM~~vtdlpfR~l~~---~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~---G~-~p~~~a~AA~~ 262 (540)
+|.|.+ |..-.+++|. +||+.-+|.--..+... ...+. .++..+..=+. |. ..+.-+.-++.
T Consensus 51 lL~p~~--t~~~I~~lc~eA~~~~~aaVCV~p~~V~~a-------~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~ 119 (260)
T 3r12_A 51 NLKPFA--TPDDIKKLCLEARENRFHGVCVNPCYVKLA-------REELE--GTDVKVVTVVGFPLGANETRTKAHEAIF 119 (260)
T ss_dssp ECCTTC--CHHHHHHHHHHHHHTTCSEEEECGGGHHHH-------HHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred cCCCCC--CHHHHHHHHHHHHhcCCcEEEECHHHHHHH-------HHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHH
Confidence 477744 4555688886 47887665332221110 01121 12222221111 22 33333333344
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecCCCCCChhHHHHHHHHHHHcCC
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRTGYFEGKNRIDSLIADIGTWGA 341 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~G~~e~~~~~~~la~~leeaGv 341 (540)
+. +.|+|.||+.+ .+|..+-.+.+.+.+-+++++++.+ .|+-|=+-++.- +.++....++...++|+
T Consensus 120 Ai-~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L-t~eei~~A~~ia~eaGA 187 (260)
T 3r12_A 120 AV-ESGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYL-DTEEKIAACVISKLAGA 187 (260)
T ss_dssp HH-HHTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC-CHHHHHHHHHHHHHTTC
T ss_pred HH-HcCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCC-CHHHHHHHHHHHHHhCc
Confidence 44 45999999852 2455555678888888888887763 444332334433 34567777888899999
Q ss_pred cEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC--eeeecHHHH
Q 009196 342 SAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA--SCMIARGAL 409 (540)
Q Consensus 342 daItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD--gVMIGRgaL 409 (540)
|+|--+ | +...+.|..+-++.+++.++.+++|-++|||.|.+++.++++ .||+ |+..|+.++
T Consensus 188 DfVKTS--T--Gf~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi~--aGA~RiGtS~g~~I~ 251 (260)
T 3r12_A 188 HFVKTS--T--GFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMIM--YGADRIGTSSGVKIV 251 (260)
T ss_dssp SEEECC--C--SSSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH--TTCSEEEESCHHHHH
T ss_pred CEEEcC--C--CCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH--cCCceeecchHHHHH
Confidence 999654 1 112345777888888887776899999999999999999987 7999 666666655
No 177
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=97.94 E-value=4e-05 Score=79.81 Aligned_cols=121 Identities=13% Similarity=0.043 Sum_probs=98.7
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+++.+.+.|+.+. +.||+.|.|+.| |+...+++++|++++ ++++.|....+|+ ..+
T Consensus 147 ~~~~~~~~~a~~~~-~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~~--~~~- 204 (375)
T 1r0m_A 147 ADEQATVDLVRRHV-EQGYRRIKLKIK------------------PGWDVQPVRATREAFPDIRLTVDANSAYT--LAD- 204 (375)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCCC--GGG-
T ss_pred CCHHHHHHHHHHHH-HhcccEEEEecC------------------hHHHHHHHHHHHHHcCCCeEEEeCCCCCC--HHH-
Confidence 48899988888876 579999999852 233345667777665 6789998888885 456
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++
T Consensus 205 ~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~i 268 (375)
T 1r0m_A 205 AGRLRQLDEYDLTYIE-------QPL-AWDDLVDHAELARRI--RTPLCLDESVASASDARKALAL-GAGGVINL 268 (375)
T ss_dssp HHHHHTTGGGCCSCEE-------CCS-CTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHH-TSCSEEEE
T ss_pred HHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhC--CCCEEecCccCCHHHHHHHHHh-CCCCEEEE
Confidence 8999999999999884 444 356899999999988 7999999999999999999986 78999998
No 178
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=97.94 E-value=6.6e-05 Score=79.44 Aligned_cols=140 Identities=10% Similarity=0.049 Sum_probs=106.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCccc---ccCCccc----cccC---CchHHHHHHHHhcccc--cccEEEEe
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIV---VNKGAGS----CLLT---KPMRMKGIIEATSGTV--DKPITIKV 318 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v---~~~G~Gs----aLl~---~p~~l~eIv~av~~~v--~iPVtVKi 318 (540)
.+++.+++.|+.+. +.||..|-|..+.+-... ...|.|. ..-. ..+...++|++||+++ +++|.|..
T Consensus 142 ~~~e~~~~~a~~~~-~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDa 220 (409)
T 3go2_A 142 TDLDGVKRTAEEAR-ERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDL 220 (409)
T ss_dssp CSHHHHHHHHHHHH-HTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 36899998888776 569999999874322110 0112221 0000 1356778999999987 67999998
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
..+|+ ..++.++++.|++.|+++|-. +..+++..+++++.+ ++||++.+.+.+++++.++++. ..
T Consensus 221 N~~~~--~~~A~~~~~~L~~~~i~~iE~----------P~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~~ 285 (409)
T 3go2_A 221 NFNAK--PEGYLKILRELADFDLFWVEI----------DSYSPQGLAYVRNHS--PHPISSCETLFGIREFKPFFDA-NA 285 (409)
T ss_dssp TTCSC--HHHHHHHHHHTTTSCCSEEEC----------CCSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHT-TC
T ss_pred CCCCC--HHHHHHHHHHHhhcCCeEEEe----------CcCCHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHh-CC
Confidence 88884 578999999999999999973 235889999999988 7999999999999999999986 78
Q ss_pred cCeeeecH
Q 009196 399 LASCMIAR 406 (540)
Q Consensus 399 aDgVMIGR 406 (540)
+|.|++=-
T Consensus 286 ~d~v~~k~ 293 (409)
T 3go2_A 286 VDVAIVDT 293 (409)
T ss_dssp CSEEEECH
T ss_pred CCEEEeCC
Confidence 99998753
No 179
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=97.94 E-value=0.00012 Score=72.17 Aligned_cols=188 Identities=20% Similarity=0.141 Sum_probs=118.5
Q ss_pred EccCCCCCCHHHHHHHH---HhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec---CC-cHHHHHHHHHHH
Q 009196 191 LAPLTTVGNLPFRRVCK---VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC---GA-YPDTLARTVELI 263 (540)
Q Consensus 191 LAPM~~vtdlpfR~l~~---~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~---G~-~p~~~a~AA~~~ 263 (540)
|.|..+ ..-.+++|. +||+.-+|.-...+.. ...+ ..++..+..=+. |. ..+.-+.-++.+
T Consensus 22 L~p~~t--~~~i~~lc~eA~~~~~~aVcV~p~~v~~--------a~~l--~~~~v~v~tVigFP~G~~~~~~K~~E~~~A 89 (231)
T 3ndo_A 22 LKPEAT--PSDVTALVDEAADLGVFAVCVSPPLVSV--------AAGV--APSGLAIAAVAGFPSGKHVPGIKATEAELA 89 (231)
T ss_dssp CCTTCC--HHHHHHHHHHHHHHTCSEEEECGGGHHH--------HHHH--CCTTCEEEEEESTTTCCSCHHHHHHHHHHH
T ss_pred CCCCCC--HHHHHHHHHHHHHhCCcEEEECHHHHHH--------HHHh--cCCCCeEEEEecCCCCCCcHHHHHHHHHHH
Confidence 667544 445677775 4798766543222211 0011 112222222121 22 333333334444
Q ss_pred HHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC--CCC---CChhHHHHHHHHHHH
Q 009196 264 DQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT--GYF---EGKNRIDSLIADIGT 338 (540)
Q Consensus 264 ~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~--G~~---e~~~~~~~la~~lee 338 (540)
. +.|+|.||+.+ .+|..+-.+.+.+.+-+++++++++ ...+|+-+ +.- .+.++....++...+
T Consensus 90 i-~~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~ 157 (231)
T 3ndo_A 90 V-AAGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLADVCRVARD 157 (231)
T ss_dssp H-HTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHHHHHHHHH
T ss_pred H-HcCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHHHHHHHHH
Confidence 4 46999999853 3455555688888888888888874 23446433 322 134566777788889
Q ss_pred cCCcEEEEecccccCcc--CCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC--eeeecHHHH
Q 009196 339 WGASAVTVHGRTRQQRY--SKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA--SCMIARGAL 409 (540)
Q Consensus 339 aGvdaItVHgRtr~q~y--~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD--gVMIGRgaL 409 (540)
+|+|+|--+. +| .+.|..+-++.+++.+..+++|-+.|||.+.+++.++++ .||+ |+..|+.++
T Consensus 158 aGADfVKTST-----Gf~~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i~--aGa~RiGtS~g~~I~ 225 (231)
T 3ndo_A 158 AGADFVKTST-----GFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLD--AGATRLGLSGSRAVL 225 (231)
T ss_dssp TTCSEEECCC-----SCCTTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHHH--TTCSEEEESSHHHHH
T ss_pred HCcCEEEcCC-----CCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH--hcchhcccchHHHHH
Confidence 9999996531 22 255778888888888766899999999999999999997 7999 777776665
No 180
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=97.93 E-value=0.00013 Score=76.71 Aligned_cols=145 Identities=14% Similarity=0.091 Sum_probs=111.2
Q ss_pred cHHHHHHHH-HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 252 YPDTLARTV-ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 252 ~p~~~a~AA-~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
++++.+..+ +... +.||..|-|..|++.. ..+...++...++++++|+++ ++++.|....+|+ ..+
T Consensus 146 ~~~~~~~~~~~~~~-~~Gf~~~K~KvG~~~~--------~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~--~~~ 214 (388)
T 3tcs_A 146 TPRDEAERLKRLRD-TQGFTAFKVRAGAEVG--------RNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYT--PDR 214 (388)
T ss_dssp CHHHHHHHHHHHHH-HHCCCEEEEECSCTTC--------TTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCC--HHH
T ss_pred ChHHHHHHHHHHHH-hcCCCEEEEccCCCcc--------cccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcC--HHH
Confidence 465555444 3333 4599999999987642 122234677888999999987 6799999999994 578
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
+.++++.|++.|+.+| +|.. .+.+++..+++++.+ ++||.+...+.+..++.++++. ..+|.|++--+-
T Consensus 215 A~~~~~~l~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~d~v~~d~~~ 283 (388)
T 3tcs_A 215 AIEVGHMLQDHGFCHF-------EEPC-PYWELAQTKQVTDAL--DIDVTGGEQDCDLPTWQRMIDM-RAVDIVQPDILY 283 (388)
T ss_dssp HHHHHHHHHHTTCCEE-------ECCS-CTTCHHHHHHHHHHC--SSCEEECTTCCCHHHHHHHHHH-TCCSEECCCHHH
T ss_pred HHHHHHHHhhcCCeEE-------ECCC-CccCHHHHHHHHHhc--CCCEEcCCccCCHHHHHHHHHc-CCCCEEEeCccc
Confidence 9999999999999887 3443 345899999999998 7999999999999999999986 789999987666
Q ss_pred HhCCCchHHH
Q 009196 409 LIKPWIFTEI 418 (540)
Q Consensus 409 L~nPwif~ei 418 (540)
.+-..=+.+|
T Consensus 284 ~GGit~a~ki 293 (388)
T 3tcs_A 284 LGGICRTLRV 293 (388)
T ss_dssp HTSHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 5554444444
No 181
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=97.91 E-value=0.00014 Score=76.36 Aligned_cols=140 Identities=11% Similarity=0.086 Sum_probs=109.9
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG 321 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G 321 (540)
|+...+...+++.+.+.|+.+. +.||..|-|..|+. .++.-.+.|++||+++ ++++.|....+
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~-~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~~ 202 (385)
T 3i6e_A 139 PLSCSIANPDFDADIALMERLR-ADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQG 202 (385)
T ss_dssp EBEEEECCSSHHHHHHHHHHHH-HHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTC
T ss_pred EEEEEcCCCCHHHHHHHHHHHH-HcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4455666678888777666554 34999999987652 2455567788888876 67899999999
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCe
Q 009196 322 YFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 322 ~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDg 401 (540)
|+ ..++.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||.+...+.++.++.++++. ..+|.
T Consensus 203 ~~--~~~A~~~~~~L~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~-~~~d~ 269 (385)
T 3i6e_A 203 LE--IDEAVPRVLDVAQFQPDFIE-------QPV-RAHHFELMARLRGLT--DVPLLADESVYGPEDMVRAAHE-GICDG 269 (385)
T ss_dssp CC--GGGHHHHHHHHHTTCCSCEE-------CCS-CTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHH-TCCSE
T ss_pred CC--HHHHHHHHHHHHhcCCCEEE-------CCC-CcccHHHHHHHHHhC--CCCEEEeCCcCCHHHHHHHHHc-CCCCE
Confidence 95 56789999999999999883 443 346899999999988 6999999999999999999986 78999
Q ss_pred eeecHHHHhC
Q 009196 402 CMIARGALIK 411 (540)
Q Consensus 402 VMIGRgaL~n 411 (540)
|++--+-.+-
T Consensus 270 v~~k~~~~GG 279 (385)
T 3i6e_A 270 VSIKIMKSGG 279 (385)
T ss_dssp EEECHHHHTS
T ss_pred EEecccccCC
Confidence 9986555443
No 182
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=97.91 E-value=6.1e-05 Score=75.71 Aligned_cols=157 Identities=11% Similarity=0.139 Sum_probs=97.1
Q ss_pred CeEEEEecCCc--HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCc------ccccc--CCchHHHHHHHHhccccc
Q 009196 242 DLFGVQICGAY--PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGA------GSCLL--TKPMRMKGIIEATSGTVD 311 (540)
Q Consensus 242 ~p~~vQL~G~~--p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~------GsaLl--~~p~~l~eIv~av~~~v~ 311 (540)
..++.=|...+ .+...+.++.+. ++ +|+||| |=|...-.-+|- -.+|. -+.+.+.++++++++.++
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~-~~-aD~IEl--G~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~ 91 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVL-PY-ADLLEI--GLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTE 91 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHG-GG-CSSEEE--ECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCC
T ss_pred ceEEEEecCCCCChHHHHHHHHHHH-hc-CCEEEE--CCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC
Confidence 34555555444 467777777776 56 999999 455532111110 00000 256677899999998888
Q ss_pred ccEEEEecCCCCCC--hhHHHHHHHHHHHcCCcEEEEecc--------------------------ccc-----------
Q 009196 312 KPITIKVRTGYFEG--KNRIDSLIADIGTWGASAVTVHGR--------------------------TRQ----------- 352 (540)
Q Consensus 312 iPVtVKiR~G~~e~--~~~~~~la~~leeaGvdaItVHgR--------------------------tr~----------- 352 (540)
+||.+ + ++.+. ..-...+++.+.++|++.+++-.- +..
T Consensus 92 ~Pii~-m--~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~ 168 (271)
T 1ujp_A 92 KPLFL-M--TYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHAT 168 (271)
T ss_dssp SCEEE-E--CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCC
T ss_pred CCEEE-E--ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCC
Confidence 99888 3 32110 012356677777777776654110 000
Q ss_pred --------CccCCC------cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 353 --------QRYSKL------ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 353 --------q~y~g~------adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
.+++|. ...++++++++.. ++||+..|||.+++++.++ . +||+|+||.++...
T Consensus 169 gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGI~t~e~a~~~--~--~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 169 GFVYAVSVTGVTGMRERLPEEVKDLVRRIKART--ALPVAVGFGVSGKATAAQA--A--VADGVVVGSALVRA 235 (271)
T ss_dssp SCEEEECC------------CCHHHHHHHHTTC--CSCEEEESCCCSHHHHHHH--T--TSSEEEECHHHHHH
T ss_pred CCEEEEecCcccCCCCCCCccHHHHHHHHHhhc--CCCEEEEcCCCCHHHHHHh--c--CCCEEEEChHHhcc
Confidence 012221 2257889999876 7999999999999999995 3 69999999887643
No 183
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=97.90 E-value=0.00019 Score=75.27 Aligned_cols=139 Identities=11% Similarity=0.126 Sum_probs=111.1
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
++...+...+++.+++.|+... +.||..|-|..|. +++.-.+.|+++++++ ++++.|....
T Consensus 133 ~~y~t~g~~~~e~~~~~a~~~~-~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDaN~ 195 (379)
T 3r0u_A 133 VTDVSISCGNVAETIQNIQNGV-EANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDANQ 195 (379)
T ss_dssp EBCEEECCCCHHHHHHHHHHHH-HTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEECTT
T ss_pred EEEEEecCCCHHHHHHHHHHHH-HcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeCCC
Confidence 4445666678999988887765 4699999998763 3566778899999988 5789999988
Q ss_pred CCCCChhHHHHHHHHHHH--cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCC
Q 009196 321 GYFEGKNRIDSLIADIGT--WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 321 G~~e~~~~~~~la~~lee--aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~g 398 (540)
+|+ ..++..+++.|++ .|+.+|- |.. .+.+++..+++++.+ ++||.++..+.+..++.++++. ..
T Consensus 196 ~w~--~~~A~~~~~~l~~~~~~l~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a 262 (379)
T 3r0u_A 196 GWN--LAQTKQFIEEINKYSLNVEIIE-------QPV-KYYDIKAMAEITKFS--NIPVVADESVFDAKDAERVIDE-QA 262 (379)
T ss_dssp CCC--HHHHHHHHHHHHTSCCCEEEEE-------CCS-CTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHT-TC
T ss_pred CcC--HHHHHHHHHHHhhcCCCcEEEE-------CCC-CcccHHHHHHHHhcC--CCCEEeCCccCCHHHHHHHHHc-CC
Confidence 984 5789999999999 6777663 433 345799999999998 6999999999999999999886 77
Q ss_pred cCeeeecHHHHhC
Q 009196 399 LASCMIARGALIK 411 (540)
Q Consensus 399 aDgVMIGRgaL~n 411 (540)
+|.|++--+-.+-
T Consensus 263 ~d~v~~k~~~~GG 275 (379)
T 3r0u_A 263 CNMINIKLAKTGG 275 (379)
T ss_dssp CSEEEECHHHHTS
T ss_pred CCEEEECccccCC
Confidence 9999986555443
No 184
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=97.89 E-value=0.00015 Score=70.06 Aligned_cols=154 Identities=16% Similarity=0.142 Sum_probs=99.8
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecC--CCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINM--GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~--GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~ 320 (540)
.+..-|.+.++..+.+.++.+. ++|+|.|++-. |.=+++. ....++++.+++.++.|+.|-+-.
T Consensus 12 ~i~p~i~a~d~~~~~~~i~~~~-~~G~d~i~l~~~dg~f~~~~-------------~~~~~~i~~l~~~~~~~~~v~l~v 77 (230)
T 1rpx_A 12 IVSPSILSANFSKLGEQVKAIE-QAGCDWIHVDVMDGRFVPNI-------------TIGPLVVDSLRPITDLPLDVHLMI 77 (230)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHH-HTTCCCEEEEEEBSSSSSCB-------------CCCHHHHHHHGGGCCSCEEEEEES
T ss_pred EEEEEeecCCHHHHHHHHHHHH-HCCCCEEEEeeccCCccccc-------------ccCHHHHHHHHhccCCcEEEEEEe
Confidence 3667778888888889888887 68999888753 2111111 111356667777666676664432
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecc--cc--------------------------cC-------------------
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGR--TR--------------------------QQ------------------- 353 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgR--tr--------------------------~q------------------- 353 (540)
.+ ..+.++.+.++|++.|++|+- .. .+
T Consensus 78 --nd----~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~p 151 (230)
T 1rpx_A 78 --VE----PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNP 151 (230)
T ss_dssp --SS----HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCT
T ss_pred --cC----HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcC
Confidence 11 235677777889999988876 20 00
Q ss_pred ccCCC-cCH---HHHHHHHHHcC---CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 354 RYSKL-ADW---DYIYQCARKAS---DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 354 ~y~g~-adw---~~I~~i~~~~~---~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
++.+. ..| +.++++++.++ .++||++.|||+ ++.+.+++. .|||+|.||+++...+..-..++
T Consensus 152 g~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~~--aGad~vvvgSaI~~a~dp~~a~~ 221 (230)
T 1rpx_A 152 GFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVIE--AGANALVAGSAVFGAPDYAEAIK 221 (230)
T ss_dssp TCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHHH--HTCCEEEESHHHHTSSCHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHHH--cCCCEEEEChhhhCCCCHHHHHH
Confidence 11111 134 44556665441 148999999997 888888666 69999999999998776544443
No 185
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=97.89 E-value=6.2e-05 Score=78.12 Aligned_cols=122 Identities=10% Similarity=-0.001 Sum_probs=98.6
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+++.+.+.|+.+. +.||+.|.|+.| |+...+++++|++++ ++++.|....+|+ ..+
T Consensus 140 ~~~~~~~~~a~~~~-~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~~--~~~- 197 (369)
T 2zc8_A 140 PSVEDTLRVVERHL-EEGYRRIKLKIK------------------PGWDYEVLKAVREAFPEATLTADANSAYS--LAN- 197 (369)
T ss_dssp SSHHHHHHHHHHHH-HTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCCC--GGG-
T ss_pred CCHHHHHHHHHHHH-HhhhheeeeecC------------------hhHHHHHHHHHHHHcCCCeEEEecCCCCC--HHH-
Confidence 47899998888876 579999999853 233345567777666 6789998888885 456
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
.++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++=
T Consensus 198 ~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~~~d~v~ik 262 (369)
T 2zc8_A 198 LAQLKRLDELRLDYIE-------QPL-AYDDLLDHAKLQREL--STPICLDESLTGAEKARKAIEL-GAGRVFNVK 262 (369)
T ss_dssp HHHHHGGGGGCCSCEE-------CCS-CTTCSHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHH-TCCSEEEEC
T ss_pred HHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHhhC--CCCEEEcCccCCHHHHHHHHHh-CCCCEEEEc
Confidence 8899999999999886 444 346899999999988 6999999999999999999986 779999874
No 186
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=97.87 E-value=0.00014 Score=77.91 Aligned_cols=164 Identities=6% Similarity=-0.006 Sum_probs=119.5
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcc-----------cccC-C-----------ccccc--cCCc
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDI-----------VVNK-G-----------AGSCL--LTKP 296 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~-----------v~~~-G-----------~GsaL--l~~p 296 (540)
-|+..-+.+.+++++++.|+.+. +.||..|-|..|-.-.. +..+ | -|..+ ....
T Consensus 145 v~~y~~~~~~~~e~~~~~a~~~~-~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (440)
T 3t6c_A 145 IALYVHTDGADEVEVEDSARAKM-EEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYA 223 (440)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHH-HTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHH
T ss_pred eEEEEECCCCCHHHHHHHHHHHH-HcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhH
Confidence 34444567788999999888776 56999999988743200 0000 0 00000 0013
Q ss_pred hHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 297 MRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 297 ~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
+...++|++||+++ +++|.|....+|+ ..++.++++.|++.|+.+|- |.. .+.+|+..+++++.+ +
T Consensus 224 ~~d~~~v~avR~a~G~d~~L~vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~ 291 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGFSVELLHDAHERIT--PINAIHMAKALEPYQLFFLE-------DPV-APENTEWLKMLRQQS--S 291 (440)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCSC--HHHHHHHHHHTGGGCCSEEE-------CSS-CGGGGGGHHHHHHHC--C
T ss_pred HHHHHHHHHHHHhcCCCCeEEEECCCCCC--HHHHHHHHHHhhhcCCCEEE-------CCC-ChhhHHHHHHHHhhc--C
Confidence 56778899999988 6799999999994 57899999999999999884 433 345788899999988 7
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
+||++.+.+.++.++.++++. ..+|.|++--+-++-..=+.+|.
T Consensus 292 iPIa~dE~~~~~~~~~~~i~~-~a~d~v~~k~~~~GGit~~~~ia 335 (440)
T 3t6c_A 292 TPIAMGELFVNVNEWKPLIDN-KLIDYIRCHISSIGGITPAKKIA 335 (440)
T ss_dssp SCEEECTTCCSHHHHHHHHHT-TCCSEECCCGGGGTSHHHHHHHH
T ss_pred CCEEeCcccCCHHHHHHHHHc-CCccceeechhhhCCHHHHHHHH
Confidence 999999999999999999986 78999998766555544444443
No 187
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=97.86 E-value=8.4e-05 Score=72.70 Aligned_cols=154 Identities=13% Similarity=0.121 Sum_probs=102.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHHhCCCCEEEecC--CCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCC
Q 009196 244 FGVQICGAYPDTLARTVELIDQQCTVDFIDINM--GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTG 321 (540)
Q Consensus 244 ~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~--GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G 321 (540)
+...|...+...+.+.++.+. ++|+|.|.|-. |.=++ +..+-.++++++++.++.|+.|-+=+.
T Consensus 7 i~psila~D~~~l~~~i~~~~-~~Gad~ihldi~DG~fvp-------------~~~~g~~~v~~lr~~~~~~~~vhlmv~ 72 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVD-EAGADWIHVDVMDGRFVP-------------NITIGPLIVDAIRPLTKKTLDVHLMIV 72 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHH-HTTCSEEEEEEEBSSSSS-------------CBCBCHHHHHHHGGGCCSEEEEEEESS
T ss_pred EEEEeeecCHhHHHHHHHHHH-HcCCCEEEEEEEecCCCc-------------chhhhHHHHHHHHhhcCCcEEEEEEcc
Confidence 667888888888889998887 68999865542 22111 122223678888887777777554431
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEEecc--cc--------------------------c-------------------Cc
Q 009196 322 YFEGKNRIDSLIADIGTWGASAVTVHGR--TR--------------------------Q-------------------QR 354 (540)
Q Consensus 322 ~~e~~~~~~~la~~leeaGvdaItVHgR--tr--------------------------~-------------------q~ 354 (540)
+. ..+++.+.++|+|.||+|.- .. . ..
T Consensus 73 ---dp---~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg 146 (230)
T 1tqj_A 73 ---EP---EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPG 146 (230)
T ss_dssp ---SG---GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC-
T ss_pred ---CH---HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccc
Confidence 11 23566677788888888865 20 0 00
Q ss_pred cCC----CcCHHHHHHHHHHcC---CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 355 YSK----LADWDYIYQCARKAS---DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 355 y~g----~adw~~I~~i~~~~~---~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+.+ +..++.++++++..+ .++||.+-|||+. +.+.++.. .|||+|.+|++++..|..-..+++
T Consensus 147 ~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~~--aGad~vvvGSai~~a~d~~~~~~~ 216 (230)
T 1tqj_A 147 FGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVLE--AGANAIVAGSAVFNAPNYAEAIAG 216 (230)
T ss_dssp ---CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHHH--HTCCEEEESHHHHTSSCHHHHHHH
T ss_pred cCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHHH--cCCCEEEECHHHHCCCCHHHHHHH
Confidence 111 123677788877651 1499999999976 88888765 699999999999987775554443
No 188
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.83 E-value=0.00038 Score=70.48 Aligned_cols=189 Identities=14% Similarity=0.043 Sum_probs=111.8
Q ss_pred EEccCCCCCCHHHHHHHH---HhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec---C-CcHHHHHHHHHH
Q 009196 190 YLAPLTTVGNLPFRRVCK---VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC---G-AYPDTLARTVEL 262 (540)
Q Consensus 190 iLAPM~~vtdlpfR~l~~---~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~---G-~~p~~~a~AA~~ 262 (540)
+|.|..+ ..-.+++|. ++|+.-+|.--..+... ...++ .++.++..=+. | ...+.-+.-++.
T Consensus 66 lL~p~~T--~~dI~~lc~eA~~~g~aaVCV~P~~V~~a-------~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~ 134 (288)
T 3oa3_A 66 QLSLSAT--GSQIDVLCAEAKEYGFATVCVRPDYVSRA-------VQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKR 134 (288)
T ss_dssp CCCTTCC--HHHHHHHHHHHHHHTCSEEEECGGGHHHH-------HHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHH
T ss_pred cCCCCCC--HHHHHHHHHHHHhcCCcEEEECHHHHHHH-------HHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHH
Confidence 3777554 445577775 47987665432221110 01121 12233322122 2 233333333444
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC--CCCCChhHHHHHHHHHHHcC
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT--GYFEGKNRIDSLIADIGTWG 340 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~--G~~e~~~~~~~la~~leeaG 340 (540)
+. +.|+|.||+.+ .+|..+-.+.+.+.+-+++|+++++-| .+|+-+ +.- +.++....++...++|
T Consensus 135 Ai-~~GAdEIDmVI----------Nig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~L-t~eei~~A~~ia~eaG 201 (288)
T 3oa3_A 135 AM-QNGASELDMVM----------NYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQL-TADEIIAGCVLSSLAG 201 (288)
T ss_dssp HH-HTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGC-CHHHHHHHHHHHHHTT
T ss_pred HH-HcCCCEEEEEe----------ehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCC-CHHHHHHHHHHHHHcC
Confidence 44 46999999542 134444457788888888888887655 366543 322 3456667778888999
Q ss_pred CcEEEEecccccCcc-CCCcCHHHHHHHHHHc---CCCceEEEeCCCCCHHHHHHHHhcCCCcC--eeeecHHHH
Q 009196 341 ASAVTVHGRTRQQRY-SKLADWDYIYQCARKA---SDDLQVLGNGDIYSYLDWNKHKSDCPELA--SCMIARGAL 409 (540)
Q Consensus 341 vdaItVHgRtr~q~y-~g~adw~~I~~i~~~~---~~~IPVIgNGdI~s~eDa~~~l~~~~gaD--gVMIGRgaL 409 (540)
+|+|--+. +| .+.|..+-+..+++.+ ..+++|.+.|||.+++++.++++ .||+ |+..|+.++
T Consensus 202 ADfVKTST-----Gf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~--aGA~RiGtS~g~~I~ 269 (288)
T 3oa3_A 202 ADYVKTST-----GFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVR--AGAERLGASAGVKIV 269 (288)
T ss_dssp CSEEECCC-----SSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHH--TTCSEEEESCHHHHH
T ss_pred CCEEEcCC-----CCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH--cCCceeehhhHHHHH
Confidence 99996541 22 2334444444444433 44799999999999999999997 7999 555555543
No 189
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=97.82 E-value=0.00015 Score=73.07 Aligned_cols=160 Identities=15% Similarity=0.103 Sum_probs=92.9
Q ss_pred CCeEEEEecCCcHH-HHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccc-cEEEEe
Q 009196 241 EDLFGVQICGAYPD-TLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDK-PITIKV 318 (540)
Q Consensus 241 e~p~~vQL~G~~p~-~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~i-PVtVKi 318 (540)
+.|+..|+++.+|- .+....+.+. ++||.+| +|. |.--.....+...|.++.-.+.++++.|+.+-.. -+|+
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk-~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti-- 167 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELK-EIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTT-- 167 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHH-HHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEEC--
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHH-HhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEE--
Confidence 67999999998873 2333335555 6799999 996 4211112223333444443344444444443311 1222
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCC------CcC-HHHHHHHHHH---cCCCceEEEeC-CCCCHH
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSK------LAD-WDYIYQCARK---ASDDLQVLGNG-DIYSYL 387 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g------~ad-w~~I~~i~~~---~~~~IPVIgNG-dI~s~e 387 (540)
.+-.+. +-++.+.++|+|.|.+|.-.......| .++ -+++.++.+. +..++.|+.-| +|.+++
T Consensus 168 --~~v~~~----eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpe 241 (286)
T 2p10_A 168 --PYVFSP----EDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPE 241 (286)
T ss_dssp --CEECSH----HHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHH
T ss_pred --EecCCH----HHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHH
Confidence 111122 345667789999999997632221111 122 3444444332 32256666555 999999
Q ss_pred HHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 388 DWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 388 Da~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
|++.+++...|+||+..|.++..=|
T Consensus 242 Dv~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 242 DARFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp HHHHHHHHCTTCCEEEESHHHHHHH
T ss_pred HHHHHHhcCCCccEEEeehhhhcCC
Confidence 9999998645799999999988766
No 190
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.80 E-value=5.5e-05 Score=75.41 Aligned_cols=156 Identities=11% Similarity=0.108 Sum_probs=96.0
Q ss_pred CCeEEEEecCC--cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCc------ccccc--CCchHHHHHHHHhcccc
Q 009196 241 EDLFGVQICGA--YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGA------GSCLL--TKPMRMKGIIEATSGTV 310 (540)
Q Consensus 241 e~p~~vQL~G~--~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~------GsaLl--~~p~~l~eIv~av~~~v 310 (540)
...++.=|... +++...+.++.+. ++|+|.|||. -|.+.-.-+|= --+|- -+.+.+.++++.++..
T Consensus 13 ~~ali~yitaG~P~~~~t~~~~~~l~-~~GaD~iElG--iPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~- 88 (252)
T 3tha_A 13 ENANVAYTVLGYPNLQTSEAFLQRLD-QSPIDILELG--VAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK- 88 (252)
T ss_dssp SSEEEEEEETTSSCHHHHHHHHHTGG-GSSCSEEEEE--CCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS-
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEC--CCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC-
Confidence 34455555544 5588888888887 7899999994 45432222220 00111 1467888889998865
Q ss_pred cccEEEEecCCCCCCh--hHHHHHHHHHHHcCCcEEEEe--------------------------cccc----------c
Q 009196 311 DKPITIKVRTGYFEGK--NRIDSLIADIGTWGASAVTVH--------------------------GRTR----------Q 352 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~--~~~~~la~~leeaGvdaItVH--------------------------gRtr----------~ 352 (540)
+|+.+ +++.... .-...|++.+.++|++.+.|- ..|. .
T Consensus 89 -~Pivl---m~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a 164 (252)
T 3tha_A 89 -KALVF---MVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHA 164 (252)
T ss_dssp -SEEEE---ECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTC
T ss_pred -CCEEE---EeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhC
Confidence 67665 2221100 012345556666666665541 1110 0
Q ss_pred C---------ccCCCc------CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 353 Q---------RYSKLA------DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 353 q---------~y~g~a------dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
. +.+|.. -.++++++++.. ++||+..+||.+++++.++. .+||||.||.+++
T Consensus 165 ~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~a~~~~---~~ADGVIVGSAiV 231 (252)
T 3tha_A 165 KGFIYLLASIGITGTKSVEEAILQDKVKEIRSFT--NLPIFVGFGIQNNQDVKRMR---KVADGVIVGTSIV 231 (252)
T ss_dssp CSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHT---TTSSEEEECHHHH
T ss_pred CCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhc--CCcEEEEcCcCCHHHHHHHH---hcCCEEEECHHHH
Confidence 1 123321 135778888876 79999999999999998854 3599999999886
No 191
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=97.80 E-value=0.00023 Score=70.59 Aligned_cols=154 Identities=13% Similarity=0.100 Sum_probs=107.1
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCC--EEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEe
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVD--FIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKV 318 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D--~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKi 318 (540)
..+...|...+...+.++.+.+. ++|+| .||+--|.=+++. .+|- .+++++++.+ ++|+.|.+
T Consensus 28 ~~i~pSilsaD~~~L~~~i~~l~-~~G~d~lHvDVmDg~FVpni---t~G~----------~~v~~lr~~~p~~~ldvHL 93 (246)
T 3inp_A 28 IQINPSILSADLARLGDDVKAVL-AAGADNIHFDVMDNHYVPNL---TFGP----------MVLKALRDYGITAGMDVHL 93 (246)
T ss_dssp CEEEEBGGGSCGGGHHHHHHHHH-HTTCCCEEEEEEBSSSSSCB---CCCH----------HHHHHHHHHTCCSCEEEEE
T ss_pred CeeehhhhcCChhhHHHHHHHHH-HcCCCEEEEEecCCCcCcch---hcCH----------HHHHHHHHhCCCCeEEEEE
Confidence 35788999999999999999997 68988 5566545433332 2332 5778888877 88999987
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEeccc---------------------------------------------ccC
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRT---------------------------------------------RQQ 353 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRt---------------------------------------------r~q 353 (540)
-+. + ...+++.+.++|++.||+|.-. ...
T Consensus 94 mv~---~---p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~P 167 (246)
T 3inp_A 94 MVK---P---VDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNP 167 (246)
T ss_dssp ECS---S---CHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCT
T ss_pred eeC---C---HHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecC
Confidence 752 1 2356788889999999999631 001
Q ss_pred ccCC----CcCHHHHHHHHHHcC---CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 354 RYSK----LADWDYIYQCARKAS---DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 354 ~y~g----~adw~~I~~i~~~~~---~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
++.| +..++.|+++++..+ .+++|..-|||+ ++.+.++++ .|||.+.+||++...+..-+.+
T Consensus 168 GfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~~--aGAD~~V~GSaIf~a~dp~~~i 236 (246)
T 3inp_A 168 GFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIAV--CGVNAFVAGSAIFNSDSYKQTI 236 (246)
T ss_dssp TC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHHT--TTCCEEEESHHHHTSSCHHHHH
T ss_pred CCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHHH--cCCCEEEEehHHhCCCCHHHHH
Confidence 1222 223666777776431 158999999996 788888775 7999999999988766544333
No 192
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=97.80 E-value=6.2e-05 Score=79.07 Aligned_cols=128 Identities=9% Similarity=0.003 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHH
Q 009196 254 DTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 254 ~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~ 331 (540)
+.++++|+.+. +.||+.|.|+.|-..... + . .++++...++|+++++++ ++++.|..--+| +.+++.+
T Consensus 150 e~~~~~a~~~~-~~Gf~~vKik~g~~~~~~--~----~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~--~~~~ai~ 219 (392)
T 3p3b_A 150 ALMQEEAMQGY-AKGQRHFKIKVGRGGRHM--P----L-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAY--NLNLTKE 219 (392)
T ss_dssp HHHHHHHHHHH-HTTCCCEEEECCHHHHTS--C----H-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCC--CHHHHHH
T ss_pred HHHHHHHHHHH-HhCCCEEEECcCcCcccC--C----c-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCC--CHHHHHH
Confidence 88999888876 679999999876321000 0 0 225677888999999987 578888777777 4578899
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHH-----cCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARK-----ASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~-----~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+++.|++.|+++|- |... .+|+..+++++. + ++||++.+ +.+++++.++++. ..+|.|++
T Consensus 220 ~~~~l~~~~i~~iE-------~P~~--~d~~~~~~l~~~l~~~g~--~iPIa~dE-~~~~~~~~~~i~~-~~~d~v~i 284 (392)
T 3p3b_A 220 VLAALSDVNLYWLE-------EAFH--EDEALYEDLKEWLGQRGQ--NVLIADGE-GLASPHLIEWATR-GRVDVLQY 284 (392)
T ss_dssp HHHHTTTSCEEEEE-------CSSS--CCHHHHHHHHHHHHHHTC--CCEEEECC-SSCCTTHHHHHHT-TSCCEECC
T ss_pred HHHHHHhcCCCEEe-------cCCc--ccHHHHHHHHHhhccCCC--CccEEecC-CCCHHHHHHHHHc-CCCCEEEe
Confidence 99999999888663 4332 588999999988 7 79999999 9999999999986 77999876
No 193
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=97.79 E-value=0.00014 Score=77.37 Aligned_cols=152 Identities=9% Similarity=-0.016 Sum_probs=108.4
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCccc---ccCCcccc--------c--------cCCchHHHHH
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIV---VNKGAGSC--------L--------LTKPMRMKGI 302 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v---~~~G~Gsa--------L--------l~~p~~l~eI 302 (540)
.|+-..+.+.+++++.+.++... +.||..|-|..|.|.... ...|.|-. + ....++..++
T Consensus 139 v~~y~~~~~~~~~~~~~~~~~~~-~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 217 (426)
T 4e4f_A 139 VMVYCHTTGHSIDEVLDDYAKHR-DQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKL 217 (426)
T ss_dssp EEEEEEECCSSHHHHHHHHHHHH-HTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHH
T ss_pred eeEeEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHH
Confidence 34555667788888877776655 469999999998774211 00111100 0 0112456789
Q ss_pred HHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe
Q 009196 303 IEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN 380 (540)
Q Consensus 303 v~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN 380 (540)
+++||+++ +++|.|....+|+ ..++..+++.|++.|+.+|- |.. .+.+++..+++++.+ ++||++.
T Consensus 218 v~avR~a~G~d~~L~vDaN~~~~--~~~A~~~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~d 285 (426)
T 4e4f_A 218 FEAVRDKFGFNEHLLHDMHHRLT--PIEAARFGKSVEDYRLFWME-------DPT-PAENQACFRLIRQHT--VTPIAVG 285 (426)
T ss_dssp HHHHHHHHTTSSEEEEECTTCSC--HHHHHHHHHHTGGGCCSEEE-------CCS-CCSSGGGGHHHHTTC--CSCEEEC
T ss_pred HHHHHHHhCCCCEEEEECCCCCC--HHHHHHHHHHHhhcCCCEEE-------CCC-ChHHHHHHHHHHhcC--CCCEEeC
Confidence 99999998 6899999888884 57899999999999999984 333 345788889999988 7999999
Q ss_pred CCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 381 GDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 381 GdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+.+.++.++.++++. ..+|.|++--+
T Consensus 286 E~~~~~~~~~~~i~~-ga~d~v~~k~~ 311 (426)
T 4e4f_A 286 EVFNSIWDCKQLIEE-QLIDYIRTTIT 311 (426)
T ss_dssp TTCCSGGGTHHHHHT-TCCSEECCCTT
T ss_pred CCcCCHHHHHHHHHc-CCCCEEEeCcc
Confidence 999999999999986 78999986543
No 194
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=97.78 E-value=0.00045 Score=67.47 Aligned_cols=189 Identities=16% Similarity=0.109 Sum_probs=117.4
Q ss_pred EEccCCCCCCHHHHHHHH---HhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEec---C-CcHHHHHHHHHH
Q 009196 190 YLAPLTTVGNLPFRRVCK---VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQIC---G-AYPDTLARTVEL 262 (540)
Q Consensus 190 iLAPM~~vtdlpfR~l~~---~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~---G-~~p~~~a~AA~~ 262 (540)
+|.|..+ ..-.+.+|. ++|++-+|.-...+... ...+. ..+.++..-+. | ...+.-+.-++.
T Consensus 11 ~L~p~~t--~~~i~~l~~~a~~~~~~aVcv~p~~v~~~-------~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~ 79 (220)
T 1ub3_A 11 LLKPTAT--LEEVAKAAEEALEYGFYGLCIPPSYVAWV-------RARYP--HAPFRLVTVVGFPLGYQEKEVKALEAAL 79 (220)
T ss_dssp CCCTTCC--HHHHHHHHHHHHHHTCSEEECCGGGHHHH-------HHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHH
T ss_pred ccCCCCC--HHHHHHHHHHHHHhCCCEEEECHHHHHHH-------HHHhC--CCCceEEEEecCCCCCCchHHHHHHHHH
Confidence 3567554 455677886 47888776332222110 01111 11223322221 2 223333444444
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEe--cCCCCCChhHHHHHHHHHHHcC
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKV--RTGYFEGKNRIDSLIADIGTWG 340 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKi--R~G~~e~~~~~~~la~~leeaG 340 (540)
+. +.|+|.||+.+ ..|...-.+.+.+.+-+.+++++.+-+ .+|+ -++.- +.++....++...++|
T Consensus 80 Ai-~~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l-~~e~i~~a~~ia~eaG 146 (220)
T 1ub3_A 80 AC-ARGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYF-SPEEIARLAEAAIRGG 146 (220)
T ss_dssp HH-HTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGS-CHHHHHHHHHHHHHHT
T ss_pred HH-HcCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCC-CHHHHHHHHHHHHHhC
Confidence 54 56999999963 234444457777777778887776433 4553 33332 3456777888889999
Q ss_pred CcEEEEecccccCccC-CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC--eeeecHHHH
Q 009196 341 ASAVTVHGRTRQQRYS-KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA--SCMIARGAL 409 (540)
Q Consensus 341 vdaItVHgRtr~q~y~-g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD--gVMIGRgaL 409 (540)
+|+|-... +|. +.|..+-++.+++.+..++||-+.|||.+.+++.++++ .||+ |+..||.++
T Consensus 147 ADfVKTsT-----Gf~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i~--aGa~RiG~S~g~~I~ 211 (220)
T 1ub3_A 147 ADFLKTST-----GFGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRMLK--AGASRLGTSSGVALV 211 (220)
T ss_dssp CSEEECCC-----SSSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHH--TTCSEEEETTHHHHH
T ss_pred CCEEEeCC-----CCCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHHH--CCCcccchhHHHHHH
Confidence 99996531 233 55777777777776655799999999999999999997 7999 887777654
No 195
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=97.76 E-value=0.00019 Score=68.61 Aligned_cols=148 Identities=8% Similarity=0.066 Sum_probs=92.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHHhCCCCEEEecC--CC-CCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC
Q 009196 244 FGVQICGAYPDTLARTVELIDQQCTVDFIDINM--GC-PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT 320 (540)
Q Consensus 244 ~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~--GC-P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~ 320 (540)
+...|...++..+.++++.+. +.|+|.|.+-. |. |. ....-.++++.+++.++.|+.|-+-+
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~-~~G~~~i~~~~~dg~~~~--------------~~~~g~~~i~~i~~~~~~~~~v~l~v 70 (220)
T 2fli_A 6 IAPSILAADYANFASELARIE-ETDAEYVHIDIMDGQFVP--------------NISFGADVVASMRKHSKLVFDCHLMV 70 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHH-HTTCCEEEEEEEBSSSSS--------------CBCBCHHHHHHHHTTCCSEEEEEEES
T ss_pred EEEEEEeCCHHHHHHHHHHHH-HcCCCEEEEEeecCCCCC--------------ccccCHHHHHHHHHhCCCCEEEEEee
Confidence 556677788888889998887 68999866542 32 11 11111245556666556565553322
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccc--------------------------c-------------------Ccc
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTR--------------------------Q-------------------QRY 355 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr--------------------------~-------------------q~y 355 (540)
.+ .. +.++.+.++|++.|++|+-.. . ..+
T Consensus 71 --~d-~~---~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~ 144 (220)
T 2fli_A 71 --VD-PE---RYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGF 144 (220)
T ss_dssp --SS-GG---GGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTC
T ss_pred --cC-HH---HHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCC
Confidence 11 11 234677788999999886210 0 001
Q ss_pred CCC-cCH---HHHHHHHHHcC---CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 356 SKL-ADW---DYIYQCARKAS---DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 356 ~g~-adw---~~I~~i~~~~~---~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
.+. ..| +.++++++.++ .++||++.|||+ ++++.++++ .|+|+|.+||+++..+..-
T Consensus 145 ~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~~--~Gad~vvvGsai~~~~d~~ 208 (220)
T 2fli_A 145 GGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACYE--AGANVFVAGSYLFKASDLV 208 (220)
T ss_dssp SSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHHH--HTCCEEEESHHHHTSSCHH
T ss_pred cccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHHH--cCCCEEEEChHHhCCCCHH
Confidence 111 133 44566665441 158999999998 899988665 6999999999998876643
No 196
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=97.76 E-value=0.00036 Score=73.07 Aligned_cols=137 Identities=8% Similarity=0.034 Sum_probs=106.2
Q ss_pred EEecCCcHHHH-HHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCC
Q 009196 246 VQICGAYPDTL-ARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGY 322 (540)
Q Consensus 246 vQL~G~~p~~~-a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~ 322 (540)
.-+...+++.+ .++++.+. +.||..|-|..|+. .++.-.+.|+++|+++ ++++.|....+|
T Consensus 142 ~t~~~~~~~~~~~~~~~~~~-~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~ 205 (382)
T 3dgb_A 142 WTLASGDTAKDIAEAQKMLD-LRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVNQAW 205 (382)
T ss_dssp EEECSSCHHHHHHHHHHHHH-TTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTTCB
T ss_pred EEecCCChHHHHHHHHHHHH-hCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCCCCC
Confidence 34444566654 44555454 46999999987652 3456677889999887 478999999999
Q ss_pred CCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 323 FEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 323 ~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
+ ..++.++++.|++.|+.+| +|.. .+.+|+..+++++.+ ++||++...+.+..++.++++. ..+|.|
T Consensus 206 ~--~~~A~~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~-~~~d~v 272 (382)
T 3dgb_A 206 D--EAVALRACRILGGNGIDLI-------EQPI-SRNNRAGMVRLNASS--PAPIMADESIECVEDAFNLARE-GAASVF 272 (382)
T ss_dssp C--HHHHHHHHHHHHTTTCCCE-------ECCB-CTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHH-TCCSEE
T ss_pred C--HHHHHHHHHHHhhcCcCee-------eCCC-CccCHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHc-CCCCEE
Confidence 5 5789999999999999888 3443 346899999999998 7999999999999999999986 789999
Q ss_pred eecHHHHhC
Q 009196 403 MIARGALIK 411 (540)
Q Consensus 403 MIGRgaL~n 411 (540)
++--+-.+-
T Consensus 273 ~~k~~~~GG 281 (382)
T 3dgb_A 273 ALKIAKNGG 281 (382)
T ss_dssp EECHHHHTS
T ss_pred EecccccCC
Confidence 986555443
No 197
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=97.75 E-value=0.0002 Score=75.32 Aligned_cols=137 Identities=7% Similarity=-0.099 Sum_probs=109.8
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEec
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVR 319 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR 319 (540)
|+...+...+++.+++.|+.+. +.||..|-|..|++ +++.-.+.|+++++++ ++++.|...
T Consensus 155 ~~y~s~~~~~~e~~~~~a~~~~-~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDaN 218 (391)
T 4e8g_A 155 PSYYATGIGQPDEIARIAAEKV-AEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDGN 218 (391)
T ss_dssp ECCEEECSCCHHHHHHHHHHHH-HTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEECT
T ss_pred EEeEEcCCCCHHHHHHHHHHHH-HcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeCC
Confidence 4445667788999998888776 56999999998863 3556667788887765 468889888
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.+|+ ..++..+++.|++.++ +| +|. ..+|+..+++++.+ ++||.+...+.+..++.++++. ..+
T Consensus 219 ~~w~--~~~A~~~~~~L~~~~i-~i-------EeP---~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~-~a~ 282 (391)
T 4e8g_A 219 RSLP--SRDALRLSRECPEIPF-VL-------EQP---CNTLEEIAAIRGRV--QHGIYLDESGEDLSTVIRAAGQ-GLC 282 (391)
T ss_dssp TCCC--HHHHHHHHHHCTTSCE-EE-------ESC---SSSHHHHHHHGGGC--CSCEEESTTCCSHHHHHHHHHT-TCC
T ss_pred CCCC--HHHHHHHHHHHhhcCe-EE-------ecC---CccHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHc-CCC
Confidence 8884 5788999999999887 66 343 35899999999988 7999999999999999999986 789
Q ss_pred CeeeecHHHHhC
Q 009196 400 ASCMIARGALIK 411 (540)
Q Consensus 400 DgVMIGRgaL~n 411 (540)
|.|++--+-.+-
T Consensus 283 d~v~ik~~~~GG 294 (391)
T 4e8g_A 283 DGFGMKLTRIGG 294 (391)
T ss_dssp SEEEEEHHHHTS
T ss_pred CEEEeCccccCC
Confidence 999987655544
No 198
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=97.74 E-value=9.5e-05 Score=74.60 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=70.1
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
..++...+..|...|-+-+.. .+.+.++|+++++.++..+||++.|||+|++++.+++. .|||+|.||.+++
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~--aGAD~VVVGSAav 260 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLD--SGADYVGFAGALE 260 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHH--TTCSEEEESGGGS
T ss_pred HHHHHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHH--cCCCEEEECchhh
Confidence 567777788999999887532 45678999999998732499999999999999999887 6999999999999
Q ss_pred hC--CCchHHHHhcC
Q 009196 410 IK--PWIFTEIKEQR 422 (540)
Q Consensus 410 ~n--Pwif~eik~~~ 422 (540)
.| |.++.++...+
T Consensus 261 ~d~~Pelv~e~a~~~ 275 (286)
T 3vk5_A 261 QPDWRSALAEIAGRR 275 (286)
T ss_dssp STTHHHHHHHHHC--
T ss_pred cCCCHHHHHHHHHhC
Confidence 99 77888887544
No 199
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=97.74 E-value=8.2e-05 Score=70.58 Aligned_cols=74 Identities=7% Similarity=0.030 Sum_probs=58.9
Q ss_pred HHHHHcCCcEEEEecccc---cCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 334 ADIGTWGASAVTVHGRTR---QQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 334 ~~leeaGvdaItVHgRtr---~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
..+.+.|+|+|.+++... .+. ..+.+|+.++++++.+ ++||++.|||. ++++.+++. .|+|+|++|++++.
T Consensus 122 ~~~~~~g~d~i~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~--~Ga~gv~vgs~i~~ 195 (215)
T 1xi3_A 122 LEAEKKGADYLGAGSVFPTKTKED-ARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLK--TGVDGIAVISAVMG 195 (215)
T ss_dssp HHHHHHTCSEEEEECSSCC----C-CCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHT--TTCSEEEESHHHHT
T ss_pred HHHHhcCCCEEEEcCCccCCCCCC-CCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHH--cCCCEEEEhHHHhC
Confidence 346678999999875311 112 2346799999999887 79999999998 999999765 79999999999998
Q ss_pred CCC
Q 009196 411 KPW 413 (540)
Q Consensus 411 nPw 413 (540)
.|+
T Consensus 196 ~~d 198 (215)
T 1xi3_A 196 AED 198 (215)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
No 200
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=97.73 E-value=0.00018 Score=75.93 Aligned_cols=138 Identities=11% Similarity=-0.068 Sum_probs=106.4
Q ss_pred eEEEEec-CCc--HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEE
Q 009196 243 LFGVQIC-GAY--PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIK 317 (540)
Q Consensus 243 p~~vQL~-G~~--p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVK 317 (540)
|+...+. +.+ ++.+++.|+.+. +.||..|.|+.+ | +.-.+.|++|++++ ++++.|.
T Consensus 151 ~~~~s~g~~~~~~~e~~~~~a~~~~-~~G~~~iKlKv~-~-----------------~~d~~~v~avR~a~G~~~~L~vD 211 (400)
T 3mwc_A 151 ESGAALGIPEDGRIETLIHQVEESL-QEGYRRIKIKIK-P-----------------GWDVEPLQETRRAVGDHFPLWTD 211 (400)
T ss_dssp EBCEEECCCTTCCHHHHHHHHHHHH-HHTCSCEEEECB-T-----------------TBSHHHHHHHHHHHCTTSCEEEE
T ss_pred EeeEEeccCCCCCHHHHHHHHHHHH-HcCCCEEEEEeC-c-----------------chHHHHHHHHHHhcCCCCEEEEe
Confidence 3334443 335 899988888765 459999999863 1 12246778888877 6799999
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP 397 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ 397 (540)
...+|+. .+ .++++.|++.|+.+|- |.. .+.+|+..+++++.+ ++||++...+.+..++.++++. .
T Consensus 212 aN~~w~~--~~-~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~~~-~ 277 (400)
T 3mwc_A 212 ANSSFEL--DQ-WETFKAMDAAKCLFHE-------QPL-HYEALLDLKELGERI--ETPICLDESLISSRVAEFVAKL-G 277 (400)
T ss_dssp CTTCCCG--GG-HHHHHHHGGGCCSCEE-------SCS-CTTCHHHHHHHHHHS--SSCEEESTTCCSHHHHHHHHHT-T
T ss_pred CCCCCCH--HH-HHHHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHhc-C
Confidence 9999963 45 7899999999999883 443 346899999999998 7999999999999999999986 7
Q ss_pred CcCeeeecHHHHhCCC
Q 009196 398 ELASCMIARGALIKPW 413 (540)
Q Consensus 398 gaDgVMIGRgaL~nPw 413 (540)
.+|.|++--+-.+...
T Consensus 278 ~~d~v~~k~~~~GGit 293 (400)
T 3mwc_A 278 ISNIWNIKIQRVGGLL 293 (400)
T ss_dssp CCSEEEECHHHHTSHH
T ss_pred CCCEEEEcchhhCCHH
Confidence 8999998766655543
No 201
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=97.72 E-value=0.0012 Score=65.75 Aligned_cols=161 Identities=11% Similarity=0.074 Sum_probs=116.1
Q ss_pred hhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHH
Q 009196 223 NLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGI 302 (540)
Q Consensus 223 ~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eI 302 (540)
...+|+...+..++. ..+-|+.-|=+.-++-+..+ +. .+|+|+|=|++.+ + ....+.++
T Consensus 84 ~~F~gs~~dL~~ir~-~v~lPvLrKDfi~~~~qi~e----a~-~~GAD~ilLi~a~--------------l-~~~~l~~l 142 (251)
T 1i4n_A 84 HYFKGDPAFVRAARN-LTCRPILAKDFYIDTVQVKL----AS-SVGADAILIIARI--------------L-TAEQIKEI 142 (251)
T ss_dssp SSSCCCTHHHHHHHT-TCCSCEEEECCCCSTHHHHH----HH-HTTCSEEEEEGGG--------------S-CHHHHHHH
T ss_pred cccCCCHHHHHHHHH-hCCCCEEEeeCCCCHHHHHH----HH-HcCCCEEEEeccc--------------C-CHHHHHHH
Confidence 445555554444433 24668888878877766544 22 5799999998542 1 23567788
Q ss_pred HHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc-CCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC
Q 009196 303 IEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW-GASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG 381 (540)
Q Consensus 303 v~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea-GvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG 381 (540)
++.+++ .+..+.|-+.. . .+ +.++.+. |++.|-++.|.-.. -..|++...++.+.+|.++++|+-|
T Consensus 143 ~~~a~~-lGl~~lvEv~~-----~---eE-~~~A~~l~g~~iIGinnr~l~t---~~~d~~~~~~l~~~ip~~~~vIaEs 209 (251)
T 1i4n_A 143 YEAAEE-LGMDSLVEVHS-----R---ED-LEKVFSVIRPKIIGINTRDLDT---FEIKKNVLWELLPLVPDDTVVVAES 209 (251)
T ss_dssp HHHHHT-TTCEEEEEECS-----H---HH-HHHHHTTCCCSEEEEECBCTTT---CCBCTTHHHHHGGGSCTTSEEEEES
T ss_pred HHHHHH-cCCeEEEEeCC-----H---HH-HHHHHhcCCCCEEEEeCccccc---CCCCHHHHHHHHHhCCCCCEEEEeC
Confidence 887766 47777775542 1 22 4566778 99999999986322 2467888888888887679999999
Q ss_pred CCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 382 DIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 382 dI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
||.|++|+.+++. . +|+|.||.+++.-+++-..+++
T Consensus 210 GI~t~edv~~~~~--~-a~avLVG~aimr~~d~~~~~~~ 245 (251)
T 1i4n_A 210 GIKDPRELKDLRG--K-VNAVLVGTSIMKAENPRRFLEE 245 (251)
T ss_dssp CCCCGGGHHHHTT--T-CSEEEECHHHHHCSSHHHHHHH
T ss_pred CCCCHHHHHHHHH--h-CCEEEEcHHHcCCcCHHHHHHH
Confidence 9999999999765 6 9999999999998887766654
No 202
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=97.71 E-value=0.00025 Score=74.65 Aligned_cols=131 Identities=3% Similarity=-0.049 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhCCCCEEEec-CCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHH
Q 009196 255 TLARTVELIDQQCTVDFIDIN-MGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 255 ~~a~AA~~~~~~aG~D~IDIN-~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~ 331 (540)
.+++.|+.+. +.||..|-|+ .|-+ ..+++.-.+++++||+++ +++|.|....||. +..++.+
T Consensus 155 ~~~~~a~~~~-~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~-~~~~A~~ 219 (394)
T 3mqt_A 155 AYKPLIAKAK-ERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWT-DWQKARW 219 (394)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCS-CHHHHHH
T ss_pred HHHHHHHHHH-HcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCC-CHHHHHH
Confidence 5556666665 5699999994 3311 135777888999999987 6789999888883 2467899
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
+++.|++.|+++|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++--+-.+-
T Consensus 220 ~~~~L~~~~i~~iE-------eP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k~~~~GG 288 (394)
T 3mqt_A 220 TFRQLEDIDLYFIE-------ACL-QHDDLIGHQKLAAAI--NTRLCGAEMSTTRFEAQEWLEK-TGISVVQSDYNRCGG 288 (394)
T ss_dssp HHHHTGGGCCSEEE-------SCS-CTTCHHHHHHHHHHS--SSEEEECTTCCHHHHHHHHHHH-HCCSEECCCTTTSSC
T ss_pred HHHHHhhcCCeEEE-------CCC-CcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHc-CCCCeEecCccccCC
Confidence 99999999999983 333 345899999999998 7999999999999999999986 779999875444333
No 203
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=97.70 E-value=0.0017 Score=62.88 Aligned_cols=146 Identities=8% Similarity=0.033 Sum_probs=95.0
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT 320 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~ 320 (540)
..++.+-|+.++|+.+.+.+. ++|+|+|-+|.+.+ +..+.++++.+++. ++.+.+-+..
T Consensus 64 ~~~~~v~lmv~d~~~~i~~~~----~agad~v~vH~~~~----------------~~~~~~~~~~i~~~-g~~igv~~~p 122 (228)
T 1h1y_A 64 KAYLDCHLMVTNPSDYVEPLA----KAGASGFTFHIEVS----------------RDNWQELIQSIKAK-GMRPGVSLRP 122 (228)
T ss_dssp CSEEEEEEESSCGGGGHHHHH----HHTCSEEEEEGGGC----------------TTTHHHHHHHHHHT-TCEEEEEECT
T ss_pred CCcEEEEEEecCHHHHHHHHH----HcCCCEEEECCCCc----------------ccHHHHHHHHHHHc-CCCEEEEEeC
Confidence 458899999999977755443 36999999995422 11113455555443 5555554433
Q ss_pred CCCCChhHHHHHHHHHHHc--CCcEEEEeccc---ccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhc
Q 009196 321 GYFEGKNRIDSLIADIGTW--GASAVTVHGRT---RQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSD 395 (540)
Q Consensus 321 G~~e~~~~~~~la~~leea--GvdaItVHgRt---r~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~ 395 (540)
.. . .+.++.+.+. ++|+|.+.... ..|.+ .+..++.++++++..+ ++||++.|||.. +.+.+++.
T Consensus 123 ~t--~----~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~-~~~~l~~i~~~~~~~~-~~pi~v~GGI~~-~ni~~~~~- 192 (228)
T 1h1y_A 123 GT--P----VEEVFPLVEAENPVELVLVMTVEPGFGGQKF-MPEMMEKVRALRKKYP-SLDIEVDGGLGP-STIDVAAS- 192 (228)
T ss_dssp TS--C----GGGGHHHHHSSSCCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHCT-TSEEEEESSCST-TTHHHHHH-
T ss_pred CC--C----HHHHHHHHhcCCCCCEEEEEeecCCCCcccC-CHHHHHHHHHHHHhcC-CCCEEEECCcCH-HHHHHHHH-
Confidence 21 1 1234445565 89999885432 22222 2234567788888775 699999999975 88888776
Q ss_pred CCCcCeeeecHHHHhCCCchHHH
Q 009196 396 CPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 396 ~~gaDgVMIGRgaL~nPwif~ei 418 (540)
.|||+|.+|++++..|..-..+
T Consensus 193 -aGaD~vvvGsai~~~~d~~~~~ 214 (228)
T 1h1y_A 193 -AGANCIVAGSSIFGAAEPGEVI 214 (228)
T ss_dssp -HTCCEEEESHHHHTSSCHHHHH
T ss_pred -cCCCEEEECHHHHCCCCHHHHH
Confidence 5999999999998877644333
No 204
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=97.67 E-value=0.00032 Score=73.88 Aligned_cols=126 Identities=6% Similarity=-0.016 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHhCCCCEEEec-CCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHH
Q 009196 255 TLARTVELIDQQCTVDFIDIN-MGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 255 ~~a~AA~~~~~~aG~D~IDIN-~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~ 331 (540)
.+++.|+.+. +.||..|-|+ .|.+ ..+++.-.++|++||+++ +++|.|....||. +..++.+
T Consensus 160 ~~~~~a~~~~-~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~-~~~~A~~ 224 (394)
T 3mkc_A 160 GYAPLLEKAK-AHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFT-DWYEVAR 224 (394)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCC-CHHHHHH
T ss_pred HHHHHHHHHH-HcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCC-CHHHHHH
Confidence 5556666665 5699999994 3321 125677888999999988 6789998888882 2478899
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
+++.|++.|+++|- |.. .+.+++..+++++.+ ++||++.+.+.+++++.++++. ..+|.|++--
T Consensus 225 ~~~~L~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k~ 288 (394)
T 3mkc_A 225 LLNSIEDLELYFAE-------ATL-QHDDLSGHAKLVENT--RSRICGAEMSTTRFEAEEWITK-GKVHLLQSDY 288 (394)
T ss_dssp HHHHTGGGCCSEEE-------SCS-CTTCHHHHHHHHHHC--SSCBEECTTCCHHHHHHHHHHT-TCCSEECCCT
T ss_pred HHHHhhhcCCeEEE-------CCC-CchhHHHHHHHHhhC--CCCEEeCCCCCCHHHHHHHHHc-CCCCeEecCc
Confidence 99999999999883 333 345899999999998 7999999999999999999986 7899998753
No 205
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=97.66 E-value=0.00036 Score=68.78 Aligned_cols=136 Identities=11% Similarity=0.106 Sum_probs=92.2
Q ss_pred hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC------CCCC---------ChhHH-
Q 009196 266 QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT------GYFE---------GKNRI- 329 (540)
Q Consensus 266 ~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~------G~~e---------~~~~~- 329 (540)
+.|.|+|+|- ++.--..+.+.++++++++ .++|+.+=... |.+- .....
T Consensus 34 ~~GtDaI~vG--------------gs~gvt~~~~~~~v~~ik~-~~~Piil~p~~~~~~~~gaD~il~pslln~~~~~~i 98 (235)
T 3w01_A 34 MSQTDAIMIG--------------GTDDVTEDNVIHLMSKIRR-YPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFH 98 (235)
T ss_dssp TSSCSEEEEC--------------CSSCCCHHHHHHHHHHHTT-SCSCEEEECCCSTTCCTTCSEEEEEEETTBSSGGGT
T ss_pred HcCCCEEEEC--------------CcCCcCHHHHHHHHHHhcC-cCCCEEEecCCHHHhhcCCCEEEEccccCCCCcchh
Confidence 6899999994 2333467889999999998 88898774321 1110 00111
Q ss_pred -HHHHHHHHHcCC-----cEEE-----Eeccccc---------------------------Cc-----cCC-CcCHHHHH
Q 009196 330 -DSLIADIGTWGA-----SAVT-----VHGRTRQ---------------------------QR-----YSK-LADWDYIY 365 (540)
Q Consensus 330 -~~la~~leeaGv-----daIt-----VHgRtr~---------------------------q~-----y~g-~adw~~I~ 365 (540)
-.-...+.+.|. +.|. +.+.+.. ++ ++| +.+.++++
T Consensus 99 ~g~~~~a~~~~gl~~~~~e~i~~gYivv~p~s~v~~v~~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~sG~~g~~~~v~ 178 (235)
T 3w01_A 99 NGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHMYRLPVMYIEYSGIYGDVSKVQ 178 (235)
T ss_dssp THHHHHHHHHHGGGCCGGGEEEEEEEECCSSSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEEECTTSCCCHHHHH
T ss_pred hhHHHHHHHHcCCCCcccceeeeeEEEECCCCChhhcccCCcCCCHHHHHHHHHHHHHHcCCCEEEEecCCCcCCHHHHH
Confidence 011233677787 6665 2221100 01 122 23689999
Q ss_pred HHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 366 QCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 366 ~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
++++.++ ++||+.-|||.|++++.++. .+||+|.||.++..||..+.++-+
T Consensus 179 ~ir~~~~-~~pv~vGfGI~~~e~a~~~~---~gAD~VVVGSai~~~~~~~~e~v~ 229 (235)
T 3w01_A 179 AVSEHLT-ETQLFYGGGISSEQQATEMA---AIADTIIVGDIIYKDIKKALKTVK 229 (235)
T ss_dssp HHHTTCS-SSEEEEESCCCSHHHHHHHH---TTSSEEEECTHHHHCHHHHHHTTC
T ss_pred HHHHhcC-CCCEEEECCcCCHHHHHHHH---cCCCEEEECCceecCHHHHHHHHH
Confidence 9998774 59999999999999999865 379999999999999998888743
No 206
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=97.64 E-value=0.0013 Score=68.69 Aligned_cols=148 Identities=7% Similarity=0.008 Sum_probs=109.0
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~ 320 (540)
|+...+...+++.+...++....+.||..|-|..|+. .++.-.+.|+++++++ ++++.|....
T Consensus 138 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN~ 202 (381)
T 3fcp_A 138 PVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDVNQ 202 (381)
T ss_dssp EBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEECTT
T ss_pred eeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 3334455556766554444333235899999987652 3566677889999988 4789998888
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+|+ ..++.++++.|++.|+.+| +|.. .+.+|+..+++++.+ ++||.+...+.+..++.++++. ..+|
T Consensus 203 ~~~--~~~A~~~~~~l~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~-~a~d 269 (381)
T 3fcp_A 203 AWD--AATGAKGCRELAAMGVDLI-------EQPV-SAHDNAALVRLSQQI--ETAILADEAVATAYDGYQLAQQ-GFTG 269 (381)
T ss_dssp CBC--HHHHHHHHHHHHHTTCSEE-------ECCB-CTTCHHHHHHHHHHS--SSEEEESTTCCSHHHHHHHHHT-TCCS
T ss_pred CCC--HHHHHHHHHHHhhcCccce-------eCCC-CcccHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHc-CCCC
Confidence 984 5789999999999999888 3443 346899999999998 7999999999999999999886 7899
Q ss_pred eeeecHHHHhCCCchHHH
Q 009196 401 SCMIARGALIKPWIFTEI 418 (540)
Q Consensus 401 gVMIGRgaL~nPwif~ei 418 (540)
.|++--+-.+-..=..+|
T Consensus 270 ~v~~k~~~~GGit~~~~i 287 (381)
T 3fcp_A 270 AYALKIAKAGGPNSVLAL 287 (381)
T ss_dssp EEEECHHHHTSTTHHHHH
T ss_pred EEEecccccCCHHHHHHH
Confidence 999976666555444443
No 207
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=97.63 E-value=0.00011 Score=70.44 Aligned_cols=76 Identities=12% Similarity=0.058 Sum_probs=58.9
Q ss_pred HHHHHHcCCcEEEEe----cccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 333 IADIGTWGASAVTVH----GRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 333 a~~leeaGvdaItVH----gRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
+..+.+.|+|+|.+. ..++ +.+..+.+|+.++++++.++ ++||++.|||. ++++.+++. .|+|+|.+|+++
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~-~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~~nv~~~~~--~Ga~gv~vgs~i 203 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETK-KDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-IDNAAPVIQ--AGADGVSMISAI 203 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSS-SSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-TTTSHHHHH--TTCSEEEESHHH
T ss_pred HHHHHhCCCCEEEECCCcCCCCC-CCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-HHHHHHHHH--cCCCEEEEhHHh
Confidence 455678899999972 2222 22234567999999998873 39999999998 999999776 799999999999
Q ss_pred HhCCC
Q 009196 409 LIKPW 413 (540)
Q Consensus 409 L~nPw 413 (540)
+..++
T Consensus 204 ~~~~d 208 (227)
T 2tps_A 204 SQAED 208 (227)
T ss_dssp HTSSC
T ss_pred hcCCC
Confidence 87544
No 208
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=97.63 E-value=9.5e-05 Score=72.98 Aligned_cols=88 Identities=14% Similarity=0.079 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+..++|+.+.+.|++.+++-.-... .+..+.+++.++++++.+ .+|+...|||+|.+++.+++. .|||-|.|+..
T Consensus 32 dP~~~a~~~~~~gad~lhvvDld~a-~~~~~~~~~~i~~i~~~~--~~pl~vGGGIrs~e~~~~~l~--~GadkVii~t~ 106 (243)
T 4gj1_A 32 NPLKKFKEYEKAGAKELHLVDLTGA-KDPSKRQFALIEKLAKEV--SVNLQVGGGIRSKEEVKALLD--CGVKRVVIGSM 106 (243)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEHHHH-HCGGGCCHHHHHHHHHHC--CSEEEEESSCCCHHHHHHHHH--TTCSEEEECTT
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcc-cccchhHHHHHHHHHHhc--CCCeEeccccccHHHHHHHHH--cCCCEEEEccc
Confidence 5678999999999999998653321 122346789999999998 699999999999999999887 79999999999
Q ss_pred HHhCCCchHHHHh
Q 009196 408 ALIKPWIFTEIKE 420 (540)
Q Consensus 408 aL~nPwif~eik~ 420 (540)
++.||.++.++..
T Consensus 107 a~~~p~li~e~~~ 119 (243)
T 4gj1_A 107 AIKDATLCLEILK 119 (243)
T ss_dssp TTTCHHHHHHHHH
T ss_pred cccCCchHHHHHh
Confidence 9999999988754
No 209
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=97.61 E-value=0.00058 Score=67.31 Aligned_cols=137 Identities=9% Similarity=0.029 Sum_probs=90.0
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC------CCC--------
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT------GYF-------- 323 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~------G~~-------- 323 (540)
++++.+. ++|+|.|+|-.+ .--+.+.+.++++.+++ .++|+.+=.-. |.+
T Consensus 24 ~~~~~l~-~~GaD~IelG~S--------------~g~t~~~~~~~v~~ir~-~~~Pivl~~y~~n~i~~gvDg~iipdLp 87 (234)
T 2f6u_A 24 EIIKAVA-DSGTDAVMISGT--------------QNVTYEKARTLIEKVSQ-YGLPIVVEPSDPSNVVYDVDYLFVPTVL 87 (234)
T ss_dssp HHHHHHH-TTTCSEEEECCC--------------TTCCHHHHHHHHHHHTT-SCCCEEECCSSCCCCCCCSSEEEEEEET
T ss_pred HHHHHHH-HcCCCEEEECCC--------------CCCCHHHHHHHHHHhcC-CCCCEEEecCCcchhhcCCCEEEEcccC
Confidence 3455555 689999999651 22357889999999998 78887762211 211
Q ss_pred -CChhHHH-----HHHHHH----HHcC-----CcEEEE-----eccccc----------------------C-----c--
Q 009196 324 -EGKNRID-----SLIADI----GTWG-----ASAVTV-----HGRTRQ----------------------Q-----R-- 354 (540)
Q Consensus 324 -e~~~~~~-----~la~~l----eeaG-----vdaItV-----HgRtr~----------------------q-----~-- 354 (540)
+...... +.++.+ ++.| .+.|.. ++.+.. . .
T Consensus 88 ~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~V 167 (234)
T 2f6u_A 88 NSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTKALCNIDKELAASYALVGEKLFNLPII 167 (234)
T ss_dssp TBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeecCCCCCCHHHHHHHHHhhhhhcCCCEE
Confidence 0111222 333222 6667 766662 111100 0 0
Q ss_pred c---C-CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 355 Y---S-KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 355 y---~-g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
| + ...+.++++++++.+. ++||+.-|||+|++++.+++. |||+|.||.++..+|.-
T Consensus 168 yl~~~G~~~~~~~i~~i~~~~~-~~Pv~vGgGI~s~e~a~~~~~---gAd~VIVGSa~v~~~~~ 227 (234)
T 2f6u_A 168 YIEYSGTYGNPELVAEVKKVLD-KARLFYGGGIDSREKAREMLR---YADTIIVGNVIYEKGID 227 (234)
T ss_dssp EEECTTSCCCHHHHHHHHHHCS-SSEEEEESCCCSHHHHHHHHH---HSSEEEECHHHHHHCHH
T ss_pred EEeCCCCcchHHHHHHHHHhCC-CCCEEEEecCCCHHHHHHHHh---CCCEEEEChHHHhCHHH
Confidence 0 1 1346889999999874 599999999999999999664 79999999999998853
No 210
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=97.55 E-value=0.00039 Score=68.26 Aligned_cols=84 Identities=5% Similarity=-0.106 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
+.+..+|...+-.|...|-+.+ +.. + .+.++++++++.+. ++||+.-|||+|++++.+++ .|||+|.||.
T Consensus 140 e~~~~~a~~a~~~g~~~VYld~-sG~--~---~~~~~i~~i~~~~~-~~Pv~vGGGI~t~e~a~~~~---~gAD~VVVGS 209 (228)
T 3vzx_A 140 DDIVAYARVSELLQLPIFYLEY-SGV--L---GDIEAVKKTKAVLE-TSTLFYGGGIKDAETAKQYA---EHADVIVVGN 209 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC-TTS--C---CCHHHHHHHHHHCS-SSEEEEESSCCSHHHHHHHH---TTCSEEEECT
T ss_pred HHHHHHHHHHHHcCCCEEEecC-CCC--c---CCHHHHHHHHHhcC-CCCEEEeCCCCCHHHHHHHH---hCCCEEEECh
Confidence 5566677777778899998877 432 1 27899999999873 49999999999999999976 4899999999
Q ss_pred HHHhCCCchHHHHh
Q 009196 407 GALIKPWIFTEIKE 420 (540)
Q Consensus 407 gaL~nPwif~eik~ 420 (540)
++..+|.++.++-+
T Consensus 210 a~v~~p~~~~~~v~ 223 (228)
T 3vzx_A 210 AVYEDFDRALKTVA 223 (228)
T ss_dssp HHHHCHHHHHHHHH
T ss_pred HHhcCHHHHHHHHH
Confidence 99999999888753
No 211
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=97.50 E-value=0.0013 Score=70.30 Aligned_cols=127 Identities=7% Similarity=0.013 Sum_probs=104.2
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
|.+++.+++.|+.+. +.||..|-|+.|+ +++.-.+.|+++++++ ++++.|....+|+ ..
T Consensus 199 ~~~~e~~~~~a~~~~-~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~--~~ 259 (441)
T 4a35_A 199 GYSDDTLKQLCAQAL-KDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWD--VP 259 (441)
T ss_dssp TCCHHHHHHHHHHHH-HTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCC--HH
T ss_pred CCCHHHHHHHHHHHH-HCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HH
Confidence 458999999888776 5699999999765 3556667788888887 5789998888884 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHH---cCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARK---ASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~---~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
++.++++.|++.++.+| +|.. .+.|++..+++++. + ++||.+.-.+.+..++..+++. ..+|.|++
T Consensus 260 ~A~~~~~~L~~~~~~~i-------EeP~-~~~d~~~~~~l~~~l~~~--~iPIa~gE~~~~~~~~~~~l~~-~a~div~~ 328 (441)
T 4a35_A 260 EAVEWMSKLAKFKPLWI-------EEPT-SPDDILGHATISKALVPL--GIGIATGEQCHNRVIFKQLLQA-KALQFLQI 328 (441)
T ss_dssp HHHHHHHHHGGGCCSEE-------ECCS-CTTCHHHHHHHHHHHGGG--TCEEEECTTCCSHHHHHHHHHT-TCCSEECC
T ss_pred HHHHHHHhhcccCccEE-------eCCC-CcccHHHHHHHHHhccCC--CCCEEeCCccccHHHHHHHHHc-CCCCEEEE
Confidence 89999999999998888 4443 34678888999887 6 6999999999999999999886 78999987
Q ss_pred cH
Q 009196 405 AR 406 (540)
Q Consensus 405 GR 406 (540)
--
T Consensus 329 d~ 330 (441)
T 4a35_A 329 DS 330 (441)
T ss_dssp CT
T ss_pred Cc
Confidence 43
No 212
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=97.49 E-value=0.0006 Score=84.61 Aligned_cols=194 Identities=12% Similarity=0.061 Sum_probs=117.4
Q ss_pred CCcEEEccCC-CCCCHHHHHHHHHhC-CCEEEec-cceechhccCChhhhhhhhc-ccCCCeEEEEecCCcHHHH---HH
Q 009196 186 REKLYLAPLT-TVGNLPFRRVCKVLG-ADVTCGE-MAMCTNLLQGQASEWALLRR-HSSEDLFGVQICGAYPDTL---AR 258 (540)
Q Consensus 186 knrliLAPM~-~vtdlpfR~l~~~~G-adl~~TE-mi~a~~l~~g~~~e~~ll~~-~~~e~p~~vQL~G~~p~~~---a~ 258 (540)
+.+|++|||+ ..++..+---+...| .+++-+- ....+.+ ..+...++. ...+.||+|.|.-.+|..+ ..
T Consensus 589 ~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l----~~~I~~~~~~t~~~~~~gvN~~~~~~~~~~~~~~ 664 (2051)
T 2uv8_G 589 RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGM----TAAIDSVVSQIEKGSTFGINLIYVNPFMLQWGIP 664 (2051)
T ss_dssp SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHH----HHHHHHHHHHSCTTCCEEEEEETTCTTHHHHHHH
T ss_pred ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHH----HHHHHHHHHhcCCCCceEEEEeecChhhhhhhHH
Confidence 3689999998 555776644444444 3433111 1111111 112222222 2345799999876655321 24
Q ss_pred HHHHHHHhCCCCE--EEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHH
Q 009196 259 TVELIDQQCTVDF--IDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADI 336 (540)
Q Consensus 259 AA~~~~~~aG~D~--IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~l 336 (540)
..+.+. +.|+.. |.+..|-|. ++.+.++++.+ ++++....- | ...+...+...
T Consensus 665 ~~~~~~-~~gv~i~~v~~~ag~p~---------------~~~~~~~i~~l----G~~vi~~~~-~----~~~a~~~~~~~ 719 (2051)
T 2uv8_G 665 LIKELR-SKGYPIQFLTIGAGVPS---------------LEVASEYIETL----GLKYLGLKP-G----SIDAISQVINI 719 (2051)
T ss_dssp HHHHHH-HTTCSEEEEEEESSCCC---------------HHHHHHHHHHS----CCSCEEECC-C----SHHHHHHHHHH
T ss_pred HHHHHH-HcCCCcceEEecCCCCc---------------hhhHHHHHHHc----CCEEEEecC-c----hHHHHHHHHHH
Confidence 555555 457655 888766654 23344555554 677654222 1 24566777888
Q ss_pred HHcCCcEE---EEecccccCccCCCc-----CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHh----------cCCC
Q 009196 337 GTWGASAV---TVHGRTRQQRYSKLA-----DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKS----------DCPE 398 (540)
Q Consensus 337 eeaGvdaI---tVHgRtr~q~y~g~a-----dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~----------~~~g 398 (540)
+++|+|++ .+-|. ..++..+.- -+..+.+|++.+ +||||+.|||.+.+++..+|. . -|
T Consensus 720 ~~~g~d~~ii~~~~G~-eaGGH~g~~d~~~~~l~l~~~v~~~~--~ipviaaGGi~dg~~~~aaL~g~w~~~~g~~~-lg 795 (2051)
T 2uv8_G 720 AKAHPNFPIALQWTGG-RGGGHHSFEDAHTPMLQMYSKIRRHP--NIMLIFGSGFGSADDTYPYLTGEWSTKFDYPP-MP 795 (2051)
T ss_dssp HHHSTTSCEEEEECCS-SCSEECCSCCSSHHHHHHHHHHTTCT--TBCCEEESSCCSHHHHTHHHHTCGGGTTTCCC-CC
T ss_pred HHhCCCceeEEEEEcc-CcCCCCCcccccccHHHHHHHHHhcC--CceEEEeCCCCCHHHHHHHHccccccccCccC-CC
Confidence 99999994 33332 223332321 234578888887 799999999999999999992 2 69
Q ss_pred cCeeeecHHHHhCC
Q 009196 399 LASCMIARGALIKP 412 (540)
Q Consensus 399 aDgVMIGRgaL~nP 412 (540)
||||++|.-++.-.
T Consensus 796 adGv~~GTrf~~t~ 809 (2051)
T 2uv8_G 796 FDGFLFGSRVMIAK 809 (2051)
T ss_dssp CSCEECSGGGTTST
T ss_pred CceeeechHHHhCc
Confidence 99999999887644
No 213
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=97.48 E-value=0.004 Score=58.80 Aligned_cols=143 Identities=10% Similarity=0.061 Sum_probs=86.3
Q ss_pred CCeEEEEecCCc-HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEec
Q 009196 241 EDLFGVQICGAY-PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR 319 (540)
Q Consensus 241 e~p~~vQL~G~~-p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR 319 (540)
+.|+.+=+...+ ++.+++. +. ++|+|+|-+|.+.. .+-+.++++.+++. +.++.+-+-
T Consensus 53 ~~~i~~~l~~~di~~~~~~~---a~-~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~ 111 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADI---AF-KAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI 111 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHH---HH-HTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT
T ss_pred CCeEEEEEEecCccHHHHHH---HH-hCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe
Confidence 567776666567 7776543 33 57999999985432 12233444554432 444433221
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEe-cccccCccCCCcCH-HHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCC
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVH-GRTRQQRYSKLADW-DYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCP 397 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVH-gRtr~q~y~g~adw-~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ 397 (540)
++. +..+.+..+.+.|++.|.++ +++.. +.+...+ +.++++... ++||++.|||. ++.+.++++ .
T Consensus 112 -s~~----~p~~~~~~~~~~g~d~v~~~~~~~~~--~~g~~~~~~~i~~~~~~---~~pi~v~GGI~-~~~~~~~~~--a 178 (207)
T 3ajx_A 112 -GIE----DKATRAQEVRALGAKFVEMHAGLDEQ--AKPGFDLNGLLAAGEKA---RVPFSVAGGVK-VATIPAVQK--A 178 (207)
T ss_dssp -TCS----SHHHHHHHHHHTTCSEEEEECCHHHH--TSTTCCTHHHHHHHHHH---TSCEEEESSCC-GGGHHHHHH--T
T ss_pred -cCC----ChHHHHHHHHHhCCCEEEEEeccccc--ccCCCchHHHHHHhhCC---CCCEEEECCcC-HHHHHHHHH--c
Confidence 211 12233456667799999554 44321 1121122 555555543 48999999997 788888776 7
Q ss_pred CcCeeeecHHHHhCCCchHH
Q 009196 398 ELASCMIARGALIKPWIFTE 417 (540)
Q Consensus 398 gaDgVMIGRgaL~nPwif~e 417 (540)
|||+|.+||+++..+.....
T Consensus 179 Gad~vvvGsaI~~~~dp~~~ 198 (207)
T 3ajx_A 179 GAEVAVAGGAIYGAADPAAA 198 (207)
T ss_dssp TCSEEEESHHHHTSSSHHHH
T ss_pred CCCEEEEeeeccCCCCHHHH
Confidence 99999999999886664333
No 214
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=97.41 E-value=0.0014 Score=69.45 Aligned_cols=149 Identities=6% Similarity=-0.001 Sum_probs=112.2
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccc-----cCCccccccC---CchHHHHHHHHhcccc--c
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVV-----NKGAGSCLLT---KPMRMKGIIEATSGTV--D 311 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~-----~~G~GsaLl~---~p~~l~eIv~av~~~v--~ 311 (540)
.|+...+.+.+++++.+.++.+. ..||..+-+..|.+..... ..+....... .++...+.++++++++ +
T Consensus 143 v~~y~~~~~~~~~~~~~~a~~~~-~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~ 221 (421)
T 4hnl_A 143 IPAYTHAVADNLDDLYHEIDRFL-AAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQ 221 (421)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHH-HTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cceecccCCCCHHHHHHHHHHHH-HhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCC
Confidence 45556667788999998888876 5699999999987543211 1122222222 3456677888999888 5
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNK 391 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~ 391 (540)
+.+.|..-.+| +..++.++++.|++.++.+| +|.. .+.||+..+++++.+ ++||.+.-.+.+..++.+
T Consensus 222 ~~l~vDan~~~--~~~~A~~~~~~l~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~ 289 (421)
T 4hnl_A 222 FQMLHDVHERL--HPNQAIQFAKAAEPYQLFFL-------EDIL-PPDQSHWLTQLRSQS--ATPIATGELFNNPMEWQE 289 (421)
T ss_dssp SEEEEECTTCS--CHHHHHHHHHHHGGGCCSEE-------ECCS-CGGGGGGHHHHHTTC--CCCEEECTTCCSGGGTHH
T ss_pred ceEeccccccC--CHHHHHHHHHHhhhhhhccc-------ccCC-cccchHHHHHHHhcC--CCCeecCcceehhHHHHH
Confidence 67777777777 46789999999999999887 3332 345788899999988 799999999999999999
Q ss_pred HHhcCCCcCeeee
Q 009196 392 HKSDCPELASCMI 404 (540)
Q Consensus 392 ~l~~~~gaDgVMI 404 (540)
+++. ..+|.|++
T Consensus 290 ~i~~-~a~d~v~~ 301 (421)
T 4hnl_A 290 LVKN-RQIDFMRA 301 (421)
T ss_dssp HHHT-TCCSEECC
T ss_pred HHhc-CCceEEEe
Confidence 9986 77898876
No 215
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.39 E-value=0.0041 Score=63.38 Aligned_cols=159 Identities=9% Similarity=0.029 Sum_probs=96.3
Q ss_pred HHHHHHhCCCCEEEec--CCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEec-----CCCCCCh-hHHHH
Q 009196 260 VELIDQQCTVDFIDIN--MGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR-----TGYFEGK-NRIDS 331 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN--~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR-----~G~~e~~-~~~~~ 331 (540)
++.+. ++|+|+|-+. .+ +-. -. ....+.+.++++.+++ .++|+.+=+- ++-+.+. ..+..
T Consensus 114 ve~a~-~~GAdaV~vlv~~~-~d~------~~---~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~~ 181 (304)
T 1to3_A 114 AQAVK-RDGAKALKLLVLWR-SDE------DA---QQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAIID 181 (304)
T ss_dssp HHHHH-HTTCCEEEEEEEEC-TTS------CH---HHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHHH
T ss_pred HHHHH-HcCCCEEEEEEEcC-CCc------cH---HHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHHH
Confidence 33444 5799999853 33 110 00 1223444455555443 4888877652 2211222 44556
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHH----cCCCce-EEEeCCCCCHHH----HHHHHhcCCCcCee
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARK----ASDDLQ-VLGNGDIYSYLD----WNKHKSDCPELASC 402 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~----~~~~IP-VIgNGdI~s~eD----a~~~l~~~~gaDgV 402 (540)
.++.+.+.|+|.|-+|.-.- +..+|+.+.++.+. + ++| |+..||+ +.++ +..++. .|++||
T Consensus 182 aa~~a~~lGaD~iKv~~~~~-----~~g~~~~~~~vv~~~~~~~--~~P~Vv~aGG~-~~~~~~~~~~~a~~--aGa~Gv 251 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLY-----GKGARSDLLTASQRLNGHI--NMPWVILSSGV-DEKLFPRAVRVAME--AGASGF 251 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGG-----GCSCHHHHHHHHHHHHHTC--CSCEEECCTTS-CTTTHHHHHHHHHH--TTCCEE
T ss_pred HHHHHHHcCCCEEEeCCCcC-----CCCCHHHHHHHHHhccccC--CCCeEEEecCC-CHHHHHHHHHHHHH--cCCeEE
Confidence 68888999999999986321 11267777777766 6 699 9999999 5644 555554 699999
Q ss_pred eecHHHHhC----CCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh
Q 009196 403 MIARGALIK----PWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHW 446 (540)
Q Consensus 403 MIGRgaL~n----Pwif~eik~~~~~~~s~~erl~il~~~~~~~le~~ 446 (540)
.+||.+... +..-.-++. ...+|++-|.+-++-...-|
T Consensus 252 ~vGRaI~q~~~~~~dp~~~~~~------~~~~~~~~l~~iv~~~~~~~ 293 (304)
T 1to3_A 252 LAGRAVWSSVIGLPDTELMLRD------VSAPKLQRLGEIVDEMMGKR 293 (304)
T ss_dssp EESHHHHGGGTTCSCHHHHHHH------THHHHHHHHHHHHHHHHHTC
T ss_pred EEehHHhCccccCCCHHHHHHh------hchHHHHHHHHHHhcCCChh
Confidence 999999987 655333322 13456666665555444444
No 216
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=97.36 E-value=0.0025 Score=66.31 Aligned_cols=134 Identities=13% Similarity=0.074 Sum_probs=103.5
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG 321 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G 321 (540)
++...+...+++.+++.|+.+. +.||..|-|..|.. +++.-.+.|+++++++ +.++.|...-+
T Consensus 134 ~~~~~~~~~~~e~~~~~a~~~~-~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~ 197 (365)
T 3ik4_A 134 ETDMTITAGDEVHAAASAKAIL-ARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNCG 197 (365)
T ss_dssp EBCEEECCSCHHHHHHHHHHHH-HTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTTC
T ss_pred eeeEEecCCCHHHHHHHHHHHH-HcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 3445667788999988887766 46999999987642 3566667788888877 56777777778
Q ss_pred CCCChhHHHHHHHHH--HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 322 YFEGKNRIDSLIADI--GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 322 ~~e~~~~~~~la~~l--eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
|+ ..++.++++.| ++.++.+|- |.. .+.+++..+++++.+ ++||.+.-.+.+..++.+++.. ..+
T Consensus 198 ~~--~~~A~~~~~~L~~~~~~i~~iE-------eP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~a~ 264 (365)
T 3ik4_A 198 YD--VERALAFCAACKAESIPMVLFE-------QPL-PREDWAGMAQVTAQS--GFAVAADESARSAHDVLRIARE-GTA 264 (365)
T ss_dssp CC--HHHHHHHHHHHHHTTCCEEEEE-------CCS-CTTCHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHH-TCC
T ss_pred CC--HHHHHHHHHHHhhCCCCceEEE-------CCC-CcccHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHh-CCC
Confidence 84 57888999999 666665553 433 345899999999988 6999999999999999998886 789
Q ss_pred Ceeeec
Q 009196 400 ASCMIA 405 (540)
Q Consensus 400 DgVMIG 405 (540)
|.|++=
T Consensus 265 d~v~ik 270 (365)
T 3ik4_A 265 SVINIK 270 (365)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 998865
No 217
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.35 E-value=0.011 Score=63.45 Aligned_cols=161 Identities=10% Similarity=0.100 Sum_probs=116.7
Q ss_pred hhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHH
Q 009196 223 NLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGI 302 (540)
Q Consensus 223 ~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eI 302 (540)
...+|+...+..++. .-.-|+.-+=+.-++-+..+ +. .+|+|+|=|++.+- +.+.+.++
T Consensus 91 ~~F~gs~~dL~~vr~-~v~lPvLrKDFI~d~~Qi~e----a~-~~GAD~ILLi~a~l---------------~~~~l~~l 149 (452)
T 1pii_A 91 KYFQGSFNFLPIVSQ-IAPQPILCKDFIIDPYQIYL----AR-YYQADACLLMLSVL---------------DDDQYRQL 149 (452)
T ss_dssp TTTCCCTTHHHHHHH-HCCSCEEEESCCCSHHHHHH----HH-HTTCSEEEEETTTC---------------CHHHHHHH
T ss_pred cccCCCHHHHHHHHH-hcCCCeEEEeccCCHHHHHH----HH-HcCCCEEEEEcccC---------------CHHHHHHH
Confidence 445555544444433 23567777777777776555 22 57999999997631 23567777
Q ss_pred HHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC
Q 009196 303 IEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD 382 (540)
Q Consensus 303 v~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd 382 (540)
++.+++ .+..+.|-+.. ..+ +.++.++|++.|-+..|.-.. -..|++...++.+.+|.+++||+-||
T Consensus 150 ~~~a~~-lgm~~LvEvh~--------~eE-~~~A~~lga~iIGinnr~L~t---~~~dl~~~~~L~~~ip~~~~vIaEsG 216 (452)
T 1pii_A 150 AAVAHS-LEMGVLTEVSN--------EEE-QERAIALGAKVVGINNRDLRD---LSIDLNRTRELAPKLGHNVTVISESG 216 (452)
T ss_dssp HHHHHH-TTCEEEEEECS--------HHH-HHHHHHTTCSEEEEESEETTT---TEECTHHHHHHHHHHCTTSEEEEESC
T ss_pred HHHHHH-cCCeEEEEeCC--------HHH-HHHHHHCCCCEEEEeCCCCCC---CCCCHHHHHHHHHhCCCCCeEEEECC
Confidence 777765 47777775543 122 345667899999999886432 34688999999988876799999999
Q ss_pred CCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 383 IYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 383 I~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
|.|++|+.+++. . +|+|.||.+++.-+++-..+++
T Consensus 217 I~t~edv~~~~~--~-a~avLVGealmr~~d~~~~~~~ 251 (452)
T 1pii_A 217 INTYAQVRELSH--F-ANGFLIGSALMAHDDLHAAVRR 251 (452)
T ss_dssp CCCHHHHHHHTT--T-CSEEEECHHHHTCSCHHHHHHH
T ss_pred CCCHHHHHHHHH--h-CCEEEEcHHHcCCcCHHHHHHH
Confidence 999999999765 6 9999999999999887776654
No 218
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=97.30 E-value=0.0016 Score=68.82 Aligned_cols=130 Identities=11% Similarity=0.090 Sum_probs=95.7
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccc-cCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCL-LTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIAD 335 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaL-l~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~ 335 (540)
.|+.+. +.||..|-|+ |..... .+.|..+ ..+++...++|++||+++ ++++.|..--+|+ ..++..+++.
T Consensus 163 ~a~~~~-~~G~~~~K~~---~~~~~~-~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~--~~~A~~~~~~ 235 (410)
T 3dip_A 163 LAESLV-AEGYAAMKIW---PFDDFA-SITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWG--THAAARICNA 235 (410)
T ss_dssp HHHHHH-HTTCSEEEEC---TTHHHH-TTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBC--HHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEEC---CccCcc-ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCC--HHHHHHHHHH
Confidence 344444 4699999996 332111 1122211 123566788999999988 5788888777884 5789999999
Q ss_pred HHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 336 IGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 336 leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
|++.|+.+|- |....+.+++..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++=
T Consensus 236 L~~~~i~~iE-------qP~~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~~~d~v~~k 295 (410)
T 3dip_A 236 LADYGVLWVE-------DPIAKMDNIPAVADLRRQT--RAPICGGENLAGTRRFHEMLCA-DAIDFVMLD 295 (410)
T ss_dssp GGGGTCSEEE-------CCBSCTTCHHHHHHHHHHH--CCCEEECTTCCSHHHHHHHHHT-TCCSEEEEC
T ss_pred HHhcCCCEEE-------CCCCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHc-CCCCeEeec
Confidence 9999999885 3211334788999999998 7999999999999999999986 789999874
No 219
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=97.28 E-value=0.0022 Score=67.67 Aligned_cols=128 Identities=8% Similarity=-0.025 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHhC-CCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHH
Q 009196 253 PDTLARTVELIDQQC-TVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 253 p~~~a~AA~~~~~~a-G~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~ 330 (540)
++.+++.|+.+. +. ||..|-|..| .+++.-.+.|++||+++ ++++.|...-+|+ ..++.
T Consensus 169 ~e~~~~~a~~~~-~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~--~~~A~ 229 (398)
T 4dye_A 169 PKAMAEHAVRVV-EEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWS--VPDSV 229 (398)
T ss_dssp HHHHHHHHHHHH-HHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSC--HHHHH
T ss_pred HHHHHHHHHHHH-HhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCC--HHHHH
Confidence 688888887765 45 9999999865 13555667788888877 6788888888884 57899
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHh
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALI 410 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~ 410 (540)
.+++.|++.|+.+|- |... +++..+++++.+ ++||.+...+.+..++.++++. ..+|.|++--+-.+
T Consensus 230 ~~~~~l~~~~i~~iE-------qP~~---d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~d~v~~k~~~~G 296 (398)
T 4dye_A 230 RAGIALEELDLEYLE-------DPCV---GIEGMAQVKAKV--RIPLCTNMCVVRFEDFAPAMRL-NAVDVIHGDVYKWG 296 (398)
T ss_dssp HHHHHHGGGCCSEEE-------CCSS---HHHHHHHHHHHC--CSCEEESSSCCSGGGHHHHHHT-TCCSEEEECHHHHT
T ss_pred HHHHHHhhcCCCEEc-------CCCC---CHHHHHHHHhhC--CCCEEeCCcCCCHHHHHHHHHh-CCCCEEEeCccccC
Confidence 999999999999883 4432 889999999998 7999999999999999999886 78999998765554
Q ss_pred CC
Q 009196 411 KP 412 (540)
Q Consensus 411 nP 412 (540)
-.
T Consensus 297 Gi 298 (398)
T 4dye_A 297 GI 298 (398)
T ss_dssp SH
T ss_pred CH
Confidence 43
No 220
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.28 E-value=0.0022 Score=69.20 Aligned_cols=122 Identities=17% Similarity=0.143 Sum_probs=78.0
Q ss_pred HHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHH
Q 009196 258 RTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 258 ~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~le 337 (540)
+.+..+. +.|+|.|-+. +.|+ ......+.++.++..+++||.+|--. .. +-++.+.
T Consensus 231 ~~a~~l~-~~gvd~lvvd-----------ta~G----~~~~~L~~I~~l~~~~~vpvi~k~v~----~~----~~a~~l~ 286 (486)
T 2cu0_A 231 KRAIELD-KAGVDVIVVD-----------TAHA----HNLKAIKSMKEMRQKVDADFIVGNIA----NP----KAVDDLT 286 (486)
T ss_dssp HHHHHHH-HTTCSEEEEE-----------CSCC----CCHHHHHHHHHHHHTCCSEEEEEEEC----CH----HHHTTCT
T ss_pred HHHHHHH-HhcCCceEEE-----------ecCC----cEeehhhHHHHHHHHhCCccccCCcC----CH----HHHHHhh
Confidence 3455555 5788887554 1221 12334455677777778999887433 11 2334444
Q ss_pred HcCCcEEEEecccc-cCcc----C--CCcC---HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 338 TWGASAVTVHGRTR-QQRY----S--KLAD---WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 338 eaGvdaItVHgRtr-~q~y----~--g~ad---w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
|+++|.+ |... ...+ . +... ...+.++++.+ ++|||+.|||.+..|+.++|. .|||+||+|+.
T Consensus 287 --G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~--~vpVia~GGi~~~~di~kala--lGA~~v~~g~~ 359 (486)
T 2cu0_A 287 --FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEY--GLYVIADGGIRYSGDIVKAIA--AGADAVMLGNL 359 (486)
T ss_dssp --TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHH--TCEEEEESCCCSHHHHHHHHH--TTCSEEEESTT
T ss_pred --CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHc--CCcEEecCCCCCHHHHHHHHH--cCCCceeeChh
Confidence 9999998 3211 0000 0 1111 33345555556 699999999999999999997 79999999999
Q ss_pred HHh
Q 009196 408 ALI 410 (540)
Q Consensus 408 aL~ 410 (540)
++.
T Consensus 360 ~~~ 362 (486)
T 2cu0_A 360 LAG 362 (486)
T ss_dssp TTT
T ss_pred hhc
Confidence 884
No 221
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.25 E-value=0.0048 Score=62.72 Aligned_cols=148 Identities=9% Similarity=0.045 Sum_probs=87.3
Q ss_pred CCeEEEEecCCcH-------HHHHHHHHHHHHhCCCCEEEec--CCCCCcccccCCccccccCCchHHHHHHHHhccccc
Q 009196 241 EDLFGVQICGAYP-------DTLARTVELIDQQCTVDFIDIN--MGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD 311 (540)
Q Consensus 241 e~p~~vQL~G~~p-------~~~a~AA~~~~~~aG~D~IDIN--~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~ 311 (540)
..++++.|.++.. ..+...++.+. +.|+|+|++. .|-+. .. ...+.+.++++.+.+ .+
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av-~~GAdaV~~~i~~Gs~~-------~~----~~l~~i~~v~~~a~~-~G 171 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAV-RLNSCAVAAQVYIGSEY-------EH----QSIKNIIQLVDAGMK-VG 171 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHH-HTTCSEEEEEECTTSTT-------HH----HHHHHHHHHHHHHHT-TT
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHH-HCCCCEEEEEEECCCCc-------HH----HHHHHHHHHHHHHHH-cC
Confidence 5578888776541 11212233333 5799999875 33110 00 011223344444433 26
Q ss_pred ccEEEEecCCCC--CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC-CHHH
Q 009196 312 KPITIKVRTGYF--EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY-SYLD 388 (540)
Q Consensus 312 iPVtVKiR~G~~--e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~-s~eD 388 (540)
+|+.+=.-.|.. .+.+.+...++...+.|+|.|-+. |++ +.++++.+.+ ++||++.||+. +.++
T Consensus 172 lpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~-------~t~----e~~~~vv~~~--~vPVv~~GG~~~~~~~ 238 (295)
T 3glc_A 172 MPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY-------YVE----KGFERIVAGC--PVPIVIAGGKKLPERE 238 (295)
T ss_dssp CCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE-------CCT----TTHHHHHHTC--SSCEEEECCSCCCHHH
T ss_pred CEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC-------CCH----HHHHHHHHhC--CCcEEEEECCCCCHHH
Confidence 888774322211 122234457788899999999775 432 2357777776 69999999998 4444
Q ss_pred HH----HHHhcCCCcCeeeecHHHHhCCCchH
Q 009196 389 WN----KHKSDCPELASCMIARGALIKPWIFT 416 (540)
Q Consensus 389 a~----~~l~~~~gaDgVMIGRgaL~nPwif~ 416 (540)
+. +++. .||+||.+||.++..|....
T Consensus 239 ~l~~v~~ai~--aGA~Gv~vGRnI~q~~dp~~ 268 (295)
T 3glc_A 239 ALEMCWQAID--QGASGVDMGRNIFQSDHPVA 268 (295)
T ss_dssp HHHHHHHHHH--TTCSEEEESHHHHTSSSHHH
T ss_pred HHHHHHHHHH--hCCeEEEeHHHHhcCcCHHH
Confidence 44 4444 69999999999998775433
No 222
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=97.24 E-value=0.00066 Score=67.15 Aligned_cols=83 Identities=11% Similarity=-0.027 Sum_probs=60.5
Q ss_pred HHHHHHcCCcEEEEeccc---ccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 333 IADIGTWGASAVTVHGRT---RQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 333 a~~leeaGvdaItVHgRt---r~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
+..+.+.|+|+|.+.... ..+.+ .+..|+.++++++..+.++||++-||| +++++.+++. .|||+|.|+++++
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~-~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~--aGa~gvav~sai~ 223 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGR-AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLD--AGARRIVVVRAIT 223 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHH--TTCCCEEESHHHH
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCc-chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHH--cCCCEEEEeHHHh
Confidence 445667899999996531 11222 346799999998762126999999999 9999999776 8999999999999
Q ss_pred hCCCchHHHH
Q 009196 410 IKPWIFTEIK 419 (540)
Q Consensus 410 ~nPwif~eik 419 (540)
..+.....++
T Consensus 224 ~a~dp~~a~~ 233 (243)
T 3o63_A 224 SADDPRAAAE 233 (243)
T ss_dssp TCSSHHHHHH
T ss_pred CCCCHHHHHH
Confidence 8776655443
No 223
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=97.22 E-value=0.0012 Score=84.88 Aligned_cols=192 Identities=14% Similarity=0.065 Sum_probs=113.6
Q ss_pred CCcEEEccCCCC-CCHHHHHHHHHh-CCCEE-EeccceechhccCChhhhhhhhc-ccCCCeEEEEecCCcHHHH-----
Q 009196 186 REKLYLAPLTTV-GNLPFRRVCKVL-GADVT-CGEMAMCTNLLQGQASEWALLRR-HSSEDLFGVQICGAYPDTL----- 256 (540)
Q Consensus 186 knrliLAPM~~v-tdlpfR~l~~~~-Gadl~-~TEmi~a~~l~~g~~~e~~ll~~-~~~e~p~~vQL~G~~p~~~----- 256 (540)
+-+||+|||+.. ++..+---+... |.+.+ -.-|...+.+ ......++. .+.+.||+|.+.-.+|..+
T Consensus 427 ~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l----~~~i~~~r~~~~~~~p~~vNl~~~~p~~~~~~~g 502 (3089)
T 3zen_D 427 RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIF----NDRIAELETLLEPGRAIQFNTLFLDPYLWKLQVG 502 (3089)
T ss_dssp SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHH----HHHHHHHHHHSCTTCCCEEEEECSCHHHHHHHHH
T ss_pred CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHH----HHHHHHHHHhcCCCCceeechhhcChhhhhhccC
Confidence 568999999954 465544333333 34433 1111111111 111222222 2336788888887777542
Q ss_pred -HHHHHHHHHhCC--CCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEE-EecCCCCCChhHHHHH
Q 009196 257 -ARTVELIDQQCT--VDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITI-KVRTGYFEGKNRIDSL 332 (540)
Q Consensus 257 -a~AA~~~~~~aG--~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtV-KiR~G~~e~~~~~~~l 332 (540)
.+.++.+. +.| +|+|=+.+|.|- ++...++++.+++. ++.+.. +... .+-
T Consensus 503 ~~~~~~~~~-~~g~~vdgv~~~aG~P~---------------~ee~~~~i~~l~~~-Gi~~i~~~~~t---------~~~ 556 (3089)
T 3zen_D 503 GKRLVQRAR-QSGAPIDGLVVSAGIPD---------------LEEAVDIIDELNEV-GISHVVFKPGT---------VEQ 556 (3089)
T ss_dssp HHHHHHHHH-HTTCSCCEEEEESSCCC---------------HHHHHHHHTSTTHH-HHCSEEECCCS---------HHH
T ss_pred HHHHHHHHH-HcCCCceEEEEeCCCCc---------------hhHhHHHHHHHHHc-CCEEEEEeCCC---------HHH
Confidence 24445555 568 899999888873 23444556655543 444333 4332 233
Q ss_pred HHHHHHcCCc------EEEEecccccCccCCCcC-HHHH----HHHHHHcCCCceEEEeCCCCCHHHHHHHH--------
Q 009196 333 IADIGTWGAS------AVTVHGRTRQQRYSKLAD-WDYI----YQCARKASDDLQVLGNGDIYSYLDWNKHK-------- 393 (540)
Q Consensus 333 a~~leeaGvd------aItVHgRtr~q~y~g~ad-w~~I----~~i~~~~~~~IPVIgNGdI~s~eDa~~~l-------- 393 (540)
++++.+.|++ +|.+.|-+. ++..+..+ ...+ .+|++.+ +||||+.|||.+.+++..++
T Consensus 557 a~~~~~i~~d~~~~~y~vv~~G~ea-GGH~g~~~~~~ll~~~~~~ir~~~--~iPViaaGGI~d~~~vaaal~g~ws~~~ 633 (3089)
T 3zen_D 557 IRSVIRIAAEVPTKPVIVHIEGGRA-GGHHSWEDLDDLLLATYSELRSRS--NITICVGGGIGTPERSAEYLSGRWAEVH 633 (3089)
T ss_dssp HHHHHHHHTTSTTSCEEEEECCSSS-SEECCSCCHHHHHHHHHHHHTTCT--TEEEEEESSCCCTTTTHHHHHTGGGGTT
T ss_pred HHHHHHhhhhcCCCcEEEEEeCCCc-CCCCCcccHHHHHHHHHHHHhhcC--CCeEEEEeCCCCHHHHHHHhcccccccc
Confidence 5556666666 788876543 22223223 3445 5666656 79999999999999999988
Q ss_pred ---hcCCCcCeeeecHHHHhCC
Q 009196 394 ---SDCPELASCMIARGALIKP 412 (540)
Q Consensus 394 ---~~~~gaDgVMIGRgaL~nP 412 (540)
. .|||||++|..++.=+
T Consensus 634 ~~p~--lGAdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 634 GYPL--MPIDGILVGTAAMATL 653 (3089)
T ss_dssp TCCC--CCCSEEECSSTTTTCT
T ss_pred CccC--CCCCEEEecHHHHhCc
Confidence 5 6899999999887654
No 224
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.20 E-value=0.014 Score=59.92 Aligned_cols=201 Identities=13% Similarity=0.025 Sum_probs=127.3
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChh----hhh-------hhhcccCCCeEEEEe---cCCc
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQAS----EWA-------LLRRHSSEDLFGVQI---CGAY 252 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~----e~~-------ll~~~~~e~p~~vQL---~G~~ 252 (540)
++.+..| +.-|.++-+++.+.|.+.+++--........|.+. ++. .+.+.....|+++=+ +| +
T Consensus 38 ~~~i~~~--~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~ 114 (318)
T 1zlp_A 38 HGSVLMP--GVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-G 114 (318)
T ss_dssp SSSEEEE--EECSHHHHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-S
T ss_pred CCcEEEe--cCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-C
Confidence 3445545 78899999999999999887764321111123322 111 122222256776644 45 7
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCC--CChhHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYF--EGKNRI 329 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~--e~~~~~ 329 (540)
+....+.++.+. ++|+.+|.|--+.. .+++..-.|..|. ..+...+-|++++++. +.++.|--|+--. ...+++
T Consensus 115 ~~~v~~tv~~l~-~aGaagv~iED~~~-~k~cgH~~gk~L~-p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~a 191 (318)
T 1zlp_A 115 PLNVQRFIRELI-SAGAKGVFLEDQVW-PKKCGHMRGKAVV-PAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEG 191 (318)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECBCS-SCCCSSSSCCCBC-CHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCcEEEECCCCC-CccccCCCCCccC-CHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHH
Confidence 889999999888 69999999986643 2333333344444 3344444455555443 4456666676211 011467
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe---C---CCCCHHHHHHHHhcCCCcCeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN---G---DIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN---G---dI~s~eDa~~~l~~~~gaDgVM 403 (540)
++=++.++++|+|.|.+++. .+.+.++++.+.+ ++|+.+| | ...+.++..+ -|+..|.
T Consensus 192 i~Ra~Ay~eAGAd~i~~e~~---------~~~e~~~~i~~~l--~~P~lan~~~~g~~~~~~~~eL~~-----lGv~~v~ 255 (318)
T 1zlp_A 192 IRRANLYKEAGADATFVEAP---------ANVDELKEVSAKT--KGLRIANMIEGGKTPLHTPEEFKE-----MGFHLIA 255 (318)
T ss_dssp HHHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHS--CSEEEEEECTTSSSCCCCHHHHHH-----HTCCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhc--CCCEEEEeccCCCCCCCCHHHHHH-----cCCeEEE
Confidence 77888899999999999853 3567899999999 6999766 2 3556555443 5889999
Q ss_pred ecHHHH
Q 009196 404 IARGAL 409 (540)
Q Consensus 404 IGRgaL 409 (540)
+|-.++
T Consensus 256 ~~~~~~ 261 (318)
T 1zlp_A 256 HSLTAV 261 (318)
T ss_dssp ECSHHH
T ss_pred EchHHH
Confidence 886655
No 225
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=97.20 E-value=0.0073 Score=61.69 Aligned_cols=199 Identities=17% Similarity=0.060 Sum_probs=128.6
Q ss_pred CCcEEEccCCCCCCHHHHHHHHHhCCCEEEecc-ceechhccCChhh----hh-------hhhcccCCCeEEEEe---cC
Q 009196 186 REKLYLAPLTTVGNLPFRRVCKVLGADVTCGEM-AMCTNLLQGQASE----WA-------LLRRHSSEDLFGVQI---CG 250 (540)
Q Consensus 186 knrliLAPM~~vtdlpfR~l~~~~Gadl~~TEm-i~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL---~G 250 (540)
.+..+..| +.-|.++-+++.+.|.+.+++-- ..+..+ |.+.+ +. .+.+ ....|+++=+ +|
T Consensus 27 ~~~~i~~~--~ayD~~sA~l~e~aG~dai~vs~~s~a~~~--G~pD~~~vt~~em~~~~~~I~r-~~~~pviaD~d~Gyg 101 (305)
T 3ih1_A 27 ANEILQIP--GAHDAMAALVARNTGFLALYLSGAAYTASK--GLPDLGIVTSTEVAERARDLVR-ATDLPVLVDIDTGFG 101 (305)
T ss_dssp SSSCEEEE--BCSSHHHHHHHHHTTCSCEEECHHHHHHHH--TCCSSSCSCHHHHHHHHHHHHH-HHCCCEEEECTTCSS
T ss_pred CCCcEEEe--cCcCHHHHHHHHHcCCCEEEECcHHHHHhC--CCCCCCcCCHHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 34455555 77899999999999999877653 333222 43321 11 1111 1235665543 24
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCC--CChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYF--EGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~--e~~~~ 328 (540)
++....+.++.+. ++|+++|.|--+-. ++.+..-.|..|. ..+.+.+-|++++++ +.++.|--|+.-. +..++
T Consensus 102 -~~~~v~~~v~~l~-~aGaagv~iED~~~-~krcGh~~gk~l~-~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ 176 (305)
T 3ih1_A 102 -GVLNVARTAVEMV-EAKVAAVQIEDQQL-PKKCGHLNGKKLV-TTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDE 176 (305)
T ss_dssp -SHHHHHHHHHHHH-HTTCSEEEEECBCS-SCCTTCTTCCCBC-CHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHH
T ss_pred -CHHHHHHHHHHHH-HhCCcEEEECCCCC-CcccCCCCCCccc-CHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHH
Confidence 5888889999887 68999999986632 2222222344444 445555556666666 6677776676321 12457
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe---CC---CCCHHHHHHHHhcCCCcCee
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN---GD---IYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN---Gd---I~s~eDa~~~l~~~~gaDgV 402 (540)
+++=++.++++|+|+|.+++. .+.+.++++.+.+ ++|+++| |+ ..+.++.. + -|+..|
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~---------~~~~~~~~i~~~~--~~P~~~n~~~~g~tp~~~~~eL~----~-lGv~~v 240 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEAL---------QSEEEFRLFNSKV--NAPLLANMTEFGKTPYYSAEEFA----N-MGFQMV 240 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTC---------CSHHHHHHHHHHS--CSCBEEECCTTSSSCCCCHHHHH----H-TTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHHc--CCCEEEeecCCCCCCCCCHHHHH----H-cCCCEE
Confidence 888888899999999999864 3467899999999 6899877 23 44555543 3 689999
Q ss_pred eecHHHHh
Q 009196 403 MIARGALI 410 (540)
Q Consensus 403 MIGRgaL~ 410 (540)
.+|-.++.
T Consensus 241 ~~~~~~~r 248 (305)
T 3ih1_A 241 IYPVTSLR 248 (305)
T ss_dssp EECSHHHH
T ss_pred EEchHHHH
Confidence 99866553
No 226
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.11 E-value=0.00059 Score=75.03 Aligned_cols=90 Identities=16% Similarity=0.045 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHcCCcEEEEeccccc--CccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHH-----------HHHHH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQ--QRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLD-----------WNKHK 393 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~--q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eD-----------a~~~l 393 (540)
.+..++|+.+++.|++.|++-.-+.. .......+.+.|+++++.+ .+||+..|||.+.+| +.+++
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~--~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l 357 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTV--FVPLTVGGGIKDIVDVDGTKIPALEVASLYF 357 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTC--CSCEEEESSCSCEECTTCCEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhC--CCcEEEeCccccchhcccccchHHHHHHHHH
Confidence 37889999999999999988654431 1112334578899998888 799999999999954 99988
Q ss_pred hcCCCcCeeeecHHHHh-------------CCCchHHHHh
Q 009196 394 SDCPELASCMIARGALI-------------KPWIFTEIKE 420 (540)
Q Consensus 394 ~~~~gaDgVMIGRgaL~-------------nPwif~eik~ 420 (540)
. .|||.|.||.+++. +|.+++++.+
T Consensus 358 ~--aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~ 395 (555)
T 1jvn_A 358 R--SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISK 395 (555)
T ss_dssp H--HTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHH
T ss_pred H--cCCCEEEECCHHhhCchhhccccccccCHHHHHHHHH
Confidence 7 68999999999988 4789988875
No 227
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.10 E-value=0.0022 Score=62.89 Aligned_cols=146 Identities=14% Similarity=0.159 Sum_probs=97.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHHhCCCCE--EEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCC
Q 009196 244 FGVQICGAYPDTLARTVELIDQQCTVDF--IDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTG 321 (540)
Q Consensus 244 ~~vQL~G~~p~~~a~AA~~~~~~aG~D~--IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G 321 (540)
+..+|...+...+.++.+.+ +.|+|. ||+--|.=+++. .+| ..+++++++.++.|+.|-+=+-
T Consensus 3 i~pSila~D~~~l~~~i~~~--~~gad~lHvDvmDG~fvpn~---t~G----------~~~v~~lr~~~~~~~dvhLmv~ 67 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFI--DSHADYFHIDIMDGHFVPNL---TLS----------PFFVSQVKKLATKPLDCHLMVT 67 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHH--HTTCSCEEEEEECSSSSSCC---CBC----------HHHHHHHHTTCCSCEEEEEESS
T ss_pred EEeehhhCChhhHHHHHHHH--HcCCCEEEEEEEeCccCccc---hhc----------HHHHHHHHhccCCcEEEEEEec
Confidence 45677788888888888888 468886 576556522222 223 2478888887778877766542
Q ss_pred CCCChhHHHHHHHHHHHcCCcEEEEeccc-c---------------------------------------------cCcc
Q 009196 322 YFEGKNRIDSLIADIGTWGASAVTVHGRT-R---------------------------------------------QQRY 355 (540)
Q Consensus 322 ~~e~~~~~~~la~~leeaGvdaItVHgRt-r---------------------------------------------~q~y 355 (540)
+. ..+++.+.++|++.||+|.-. . ..++
T Consensus 68 ---dp---~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGf 141 (231)
T 3ctl_A 68 ---RP---QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGF 141 (231)
T ss_dssp ---CG---GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTC
T ss_pred ---CH---HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCc
Confidence 11 235677788888888888533 0 0011
Q ss_pred CC----CcCHHHHHHHHHHcC---CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec-HHHHhCCC
Q 009196 356 SK----LADWDYIYQCARKAS---DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA-RGALIKPW 413 (540)
Q Consensus 356 ~g----~adw~~I~~i~~~~~---~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG-RgaL~nPw 413 (540)
.| +..++.|+++++... .+++|..-|||+ .+.+.++++ .|||.+.+| ++++..+.
T Consensus 142 ggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~~--aGAd~~V~G~saif~~~d 204 (231)
T 3ctl_A 142 AGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLMA--AGADVFIVGTSGLFNHAE 204 (231)
T ss_dssp SSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHHH--HTCCEEEECTTTTGGGCS
T ss_pred CCccccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHHH--cCCCEEEEccHHHhCCCC
Confidence 11 122566667666542 158999999995 788888776 699999999 99887655
No 228
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.10 E-value=0.019 Score=58.13 Aligned_cols=207 Identities=13% Similarity=0.084 Sum_probs=130.1
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEeccc-eechhccCChh----hhh-------hhhcccCCCeEEEEe---cCC
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMA-MCTNLLQGQAS----EWA-------LLRRHSSEDLFGVQI---CGA 251 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi-~a~~l~~g~~~----e~~-------ll~~~~~e~p~~vQL---~G~ 251 (540)
+..+..| ++-|.++-+++.+.|.+.+++--. .+.. ..|.+. ++. .+.+ ....|+++=+ +|
T Consensus 20 ~~~i~~~--~a~D~~sA~i~e~aGf~ai~vs~s~~a~~-~lG~pD~~~vt~~em~~~~~~I~r-~~~~PviaD~d~Gyg- 94 (287)
T 3b8i_A 20 SRCYHTA--SVFDPMSARIAADLGFECGILGGSVASLQ-VLAAPDFALITLSEFVEQATRIGR-VARLPVIADADHGYG- 94 (287)
T ss_dssp SCCEECE--ECCSHHHHHHHHHTTCSCEEECHHHHHHH-HHSCCSSSCSCHHHHHHHHHHHHT-TCSSCEEEECTTCSS-
T ss_pred CCcEEEe--cCCCHHHHHHHHHcCCCEEEeCcHHHHHH-hcCCCCCCCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCC-
Confidence 4455545 788999999999999998776543 2211 123222 111 1111 2345665544 45
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC-CCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG-YFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G-~~e~~~~~ 329 (540)
+++...+.++.+. ++|+++|.|--+.. ++.+....|. +-..+.+.+-|++++++- +.++.|--|+- .....+++
T Consensus 95 ~~~~~~~~v~~l~-~aGa~gv~iED~~~-pKrcgh~~gk--l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~a 170 (287)
T 3b8i_A 95 NALNVMRTVVELE-RAGIAALTIEDTLL-PAQFGRKSTD--LICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAV 170 (287)
T ss_dssp SHHHHHHHHHHHH-HHTCSEEEEECBCC-SCCTTTCTTC--BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHH
T ss_pred CHHHHHHHHHHHH-HhCCeEEEEcCCCC-ccccCCCCCC--ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHH
Confidence 8889999999888 68999999986642 3333333344 455666666666666553 34455545542 22234678
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe-C---CCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN-G---DIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN-G---dI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++=++.++++|++.|.+++. .+.+.++++.+.+ ++|++.. | ...+.++..+ -|+..|.+|
T Consensus 171 i~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~--~~P~ii~~~g~~~~~~~~eL~~-----lGv~~v~~~ 234 (287)
T 3b8i_A 171 IQRTLAYQEAGADGICLVGV---------RDFAHLEAIAEHL--HIPLMLVTYGNPQLRDDARLAR-----LGVRVVVNG 234 (287)
T ss_dssp HHHHHHHHHTTCSEEEEECC---------CSHHHHHHHHTTC--CSCEEEECTTCGGGCCHHHHHH-----TTEEEEECC
T ss_pred HHHHHHHHHcCCCEEEecCC---------CCHHHHHHHHHhC--CCCEEEeCCCCCCCCCHHHHHH-----cCCcEEEEC
Confidence 88889999999999999853 3457889999988 6898842 2 3456555433 688888876
Q ss_pred HHHH----hCCCchHHHHh
Q 009196 406 RGAL----IKPWIFTEIKE 420 (540)
Q Consensus 406 RgaL----~nPwif~eik~ 420 (540)
-.++ .- .+..|++
T Consensus 235 ~~~~raa~~a--~~~~l~~ 251 (287)
T 3b8i_A 235 HAAYFAAIKA--TYDCLRE 251 (287)
T ss_dssp CHHHHHHHHH--HHHHHHH
T ss_pred hHHHHHHHHH--HHHHHHH
Confidence 4443 23 5555554
No 229
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.05 E-value=0.007 Score=59.19 Aligned_cols=177 Identities=13% Similarity=0.070 Sum_probs=110.6
Q ss_pred HHhCCCEE-Eeccc--eechhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCccc
Q 009196 207 KVLGADVT-CGEMA--MCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIV 283 (540)
Q Consensus 207 ~~~Gadl~-~TEmi--~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v 283 (540)
.+.|++++ +--|- .+-.+.. +....+-++.+..+.++.+.|.-.+|+.+.... . . +|.|-+|.....
T Consensus 28 ~~~g~d~iHvDvmDg~fvpn~t~-G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~---~-~--Ad~itvH~ea~~--- 97 (227)
T 1tqx_A 28 ESLGAEWIHLDVMDMHFVPNLSF-GPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLL---K-T--SNQLTFHFEALN--- 97 (227)
T ss_dssp HHTTCSEEEEEEEBSSSSSCBCC-CHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGC---T-T--SSEEEEEGGGGT---
T ss_pred HHcCCCEEEEEEEeCCcCcchhc-CHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHH---H-h--CCEEEEeecCCc---
Confidence 34689865 33331 1112212 233334455443367999999999999765322 2 2 789999864321
Q ss_pred ccCCccccccCCchHHHHHHH---HhcccccccEEEEecCCCCCChhHHHHHHHHHHHcC-CcEE---EEecccccCccC
Q 009196 284 VNKGAGSCLLTKPMRMKGIIE---ATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWG-ASAV---TVHGRTRQQRYS 356 (540)
Q Consensus 284 ~~~G~GsaLl~~p~~l~eIv~---av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaG-vdaI---tVHgRtr~q~y~ 356 (540)
.. +.++++ .+++. +.-+.|=+..+. ..+.++.+.+.| +|.| +||.....|.+
T Consensus 98 ----------~~---~~~~i~~~~~i~~~-G~k~gvalnp~t------p~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f- 156 (227)
T 1tqx_A 98 ----------ED---TERCIQLAKEIRDN-NLWCGISIKPKT------DVQKLVPILDTNLINTVLVMTVEPGFGGQSF- 156 (227)
T ss_dssp ----------TC---HHHHHHHHHHHHTT-TCEEEEEECTTS------CGGGGHHHHTTTCCSEEEEESSCTTCSSCCC-
T ss_pred ----------cC---HHHHHHHHHHHHHc-CCeEEEEeCCCC------cHHHHHHHhhcCCcCEEEEeeeccCCCCccc-
Confidence 02 334555 66553 444444333322 133455566665 9999 44555555555
Q ss_pred CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 357 KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 357 g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
.+..++-|+++++..+ +++|..-||| +.+.+.++++ .|||.+.+||+++..+..-..+
T Consensus 157 ~~~~l~ki~~lr~~~~-~~~I~VdGGI-~~~ti~~~~~--aGAd~~V~GsaIf~~~d~~~~i 214 (227)
T 1tqx_A 157 MHDMMGKVSFLRKKYK-NLNIQVDGGL-NIETTEISAS--HGANIIVAGTSIFNAEDPKYVI 214 (227)
T ss_dssp CGGGHHHHHHHHHHCT-TCEEEEESSC-CHHHHHHHHH--HTCCEEEESHHHHTCSSHHHHH
T ss_pred chHHHHHHHHHHHhcc-CCeEEEECCC-CHHHHHHHHH--cCCCEEEEeHHHhCCCCHHHHH
Confidence 3466888999998875 7999999999 5889988776 7999999999999876643333
No 230
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=97.03 E-value=0.0082 Score=59.06 Aligned_cols=185 Identities=12% Similarity=0.010 Sum_probs=108.4
Q ss_pred EEccCCCCCCHHHHHHHH---HhCCCEEEeccceechhccCChhhhhhhhcccCCCeEEEEe---cC-CcHHHHHHHHHH
Q 009196 190 YLAPLTTVGNLPFRRVCK---VLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQI---CG-AYPDTLARTVEL 262 (540)
Q Consensus 190 iLAPM~~vtdlpfR~l~~---~~Gadl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL---~G-~~p~~~a~AA~~ 262 (540)
+|.|..+ ..-.+.+|. +||++-+|.-...+ . . .. .+...+ .-.+..-+ .| ...+.-+.-++.
T Consensus 28 ~L~p~~t--~~~i~~l~~~a~~~~~~aVcv~p~~v-~-a---~~---~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~ 96 (234)
T 1n7k_A 28 LLSPRAT--EEDVRNLVREASDYGFRCAVLTPVYT-V-K---IS---GLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQT 96 (234)
T ss_dssp CCCTTCC--HHHHHHHHHHHHHHTCSEEEECHHHH-H-H---HH---HHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHH
T ss_pred ccCCCCC--HHHHHHHHHHHHHhCCCEEEEchHHh-e-e---eh---HhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHH
Confidence 4667554 455688886 47987766332222 1 0 00 111110 12222222 12 233433344444
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
+. +.|+|.||+.+ .+|+ +.. .+.+-+.+++++. +.|+-|=+-++.- +.++....++...++
T Consensus 97 Av-~~GAdEID~vi----------nig~-~~~---~v~~ei~~v~~a~~~~g~~lKvIlEt~~L-~~e~i~~a~ria~ea 160 (234)
T 1n7k_A 97 VL-EAGATELDVVP----------HLSL-GPE---AVYREVSGIVKLAKSYGAVVKVILEAPLW-DDKTLSLLVDSSRRA 160 (234)
T ss_dssp HH-HHTCCEEEECC----------CGGG-CHH---HHHHHHHHHHHHHHHTTCEEEEECCGGGS-CHHHHHHHHHHHHHT
T ss_pred HH-HcCCCEEEEec----------cchH-HHH---HHHHHHHHHHHHHhhcCCeEEEEEeccCC-CHHHHHHHHHHHHHh
Confidence 44 45999999853 1232 222 4555555565554 2555332333332 345677778888999
Q ss_pred CCcEEEEecccccCccC--CCcCHHHHHH--HHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC--eeeecHHHHh
Q 009196 340 GASAVTVHGRTRQQRYS--KLADWDYIYQ--CARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA--SCMIARGALI 410 (540)
Q Consensus 340 GvdaItVHgRtr~q~y~--g~adw~~I~~--i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD--gVMIGRgaL~ 410 (540)
|+|+|-.. .+|. +.|..+-+.. +++.+. +||-+.|||.+.+++.++++ .|++ |+..||.++.
T Consensus 161 GADfVKTs-----TG~~~~~gAt~~dv~l~~m~~~v~--v~VKaaGGirt~~~al~~i~--aGa~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 161 GADIVKTS-----TGVYTKGGDPVTVFRLASLAKPLG--MGVKASGGIRSGIDAVLAVG--AGADIIGTSSAVKVLE 228 (234)
T ss_dssp TCSEEESC-----CSSSCCCCSHHHHHHHHHHHGGGT--CEEEEESSCCSHHHHHHHHH--TTCSEEEETTHHHHHH
T ss_pred CCCEEEeC-----CCCCCCCCCCHHHHHHHHHHHHHC--CCEEEecCCCCHHHHHHHHH--cCccccchHHHHHHHH
Confidence 99999643 1233 4566666777 888774 99999999999999999996 7999 7777776553
No 231
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=97.03 E-value=0.013 Score=59.55 Aligned_cols=202 Identities=13% Similarity=0.071 Sum_probs=125.6
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChh----hhh-------hhhcccCCCeEEEEe---cCCc
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQAS----EWA-------LLRRHSSEDLFGVQI---CGAY 252 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~----e~~-------ll~~~~~e~p~~vQL---~G~~ 252 (540)
+..+..| ++-|..+-+++.+.|.+.+++--.+......|.+. ++. .+.+ ....|+++=+ +| +
T Consensus 21 ~~~i~~~--~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r-~~~~PviaD~d~Gyg-~ 96 (298)
T 3eoo_A 21 EQPLQVV--GAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITN-ATNLPLLVDIDTGWG-G 96 (298)
T ss_dssp SSSEEEE--ECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHH-HCCSCEEEECTTCSS-S
T ss_pred CCcEEEe--cCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHh-hcCCeEEEECCCCCC-C
Confidence 3445555 77899999999999999887654222212233322 111 1111 2345665533 34 7
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCC--CChhHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYF--EGKNRID 330 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~--e~~~~~~ 330 (540)
+....+.++.+. ++|+.+|.|--+.- ++.+..-.|..|....+.+.+|-.++....+.++.|--|+-.. +..++++
T Consensus 97 ~~~v~~~v~~l~-~aGaagv~iEDq~~-~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai 174 (298)
T 3eoo_A 97 AFNIARTIRSFI-KAGVGAVHLEDQVG-QKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAI 174 (298)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEECBCC-CCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhCCeEEEECCCCC-CcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHH
Confidence 888899998887 68999999975542 2223222344455444445554333333335667776786321 1234677
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe---CC---CCCHHHHHHHHhcCCCcCeeee
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN---GD---IYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN---Gd---I~s~eDa~~~l~~~~gaDgVMI 404 (540)
+=++.+.++|+|.|-+++. .+.+.+.++.+.+ ++||++| |+ ..+.++.. + -|+..|.+
T Consensus 175 ~Ra~ay~~AGAD~if~~~~---------~~~ee~~~~~~~~--~~Pl~~n~~~~g~tp~~~~~eL~----~-lGv~~v~~ 238 (298)
T 3eoo_A 175 ERAIAYVEAGADMIFPEAM---------KTLDDYRRFKEAV--KVPILANLTEFGSTPLFTLDELK----G-ANVDIALY 238 (298)
T ss_dssp HHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHH--CSCBEEECCTTSSSCCCCHHHHH----H-TTCCEEEE
T ss_pred HHHHhhHhcCCCEEEeCCC---------CCHHHHHHHHHHc--CCCeEEEeccCCCCCCCCHHHHH----H-cCCeEEEE
Confidence 7778889999999999874 2567889999998 5899887 32 34555543 3 68999999
Q ss_pred cHHHHh
Q 009196 405 ARGALI 410 (540)
Q Consensus 405 GRgaL~ 410 (540)
|-.++.
T Consensus 239 ~~~~~r 244 (298)
T 3eoo_A 239 CCGAYR 244 (298)
T ss_dssp CSHHHH
T ss_pred chHHHH
Confidence 866653
No 232
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=97.01 E-value=0.013 Score=58.82 Aligned_cols=153 Identities=12% Similarity=0.099 Sum_probs=97.5
Q ss_pred CCCCHHHHHHHHHhCCCEEEeccceechhccCChhh----hh-------hhhcccCCCeEEEEec-C---CcHHHHHHHH
Q 009196 196 TVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASE----WA-------LLRRHSSEDLFGVQIC-G---AYPDTLARTV 260 (540)
Q Consensus 196 ~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL~-G---~~p~~~a~AA 260 (540)
+.-|.++-+++.+.|++++.+.-..+. ...|.+.+ +. .+.+.....++++=+- | .++++..+.|
T Consensus 23 tayDa~sA~l~e~aG~d~ilvGdSl~~-~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na 101 (275)
T 1o66_A 23 TAYESSFAALMDDAGVEMLLVGDSLGM-AVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAA 101 (275)
T ss_dssp ECCSHHHHHHHHHTTCCEEEECTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHHH-HHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHH
Confidence 778999999999999998876532221 12343322 11 1222222334555443 2 3588888888
Q ss_pred HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC--------------CCCCCh
Q 009196 261 ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT--------------GYFEGK 326 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~--------------G~~e~~ 326 (540)
.++. ++|+++|.|--| ..+.+.|+++.++ ++||..=+.+ |-++..
T Consensus 102 ~rl~-kaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~ggf~v~grt~~a 160 (275)
T 1o66_A 102 AELM-AAGAHMVKLEGG-------------------VWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFGGYKVQGRGGKA 160 (275)
T ss_dssp HHHH-HTTCSEEEEECS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGTTC-----------CH
T ss_pred HHHH-HcCCcEEEECCc-------------------HHHHHHHHHHHHc-CCCeEeeeccCceeecccCCeEEEeChHHH
Confidence 8887 489999999643 1334555555443 7787632221 111234
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD 382 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd 382 (540)
+.+++=++.++++|+++|.+.+-. -+.+++|.+.+ ++|+||-|-
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp----------~~~a~~it~~l--~iP~igIGa 204 (275)
T 1o66_A 161 QALLNDAKAHDDAGAAVVLMECVL----------AELAKKVTETV--SCPTIGIGA 204 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHC--SSCEEEESS
T ss_pred HHHHHHHHHHHHcCCcEEEEecCC----------HHHHHHHHHhC--CCCEEEECC
Confidence 677888888999999999997521 25688999999 799998763
No 233
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.00 E-value=0.0022 Score=62.53 Aligned_cols=89 Identities=17% Similarity=0.162 Sum_probs=62.3
Q ss_pred HHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 333 IADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
+..+.+.|+|+|-+|+- ... ..++++.++..++ ++||++.||| +++.+.+++.. .|+++|. |+++...
T Consensus 123 ~~~A~~~Gad~vk~Fpa-------~~~gG~~~lk~l~~~~~-~ipvvaiGGI-~~~N~~~~l~a-gga~~v~-gS~i~~~ 191 (224)
T 1vhc_A 123 IEIALEMGISAVKFFPA-------EASGGVKMIKALLGPYA-QLQIMPTGGI-GLHNIRDYLAI-PNIVACG-GSWFVEK 191 (224)
T ss_dssp HHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHTTTT-TCEEEEBSSC-CTTTHHHHHTS-TTBCCEE-ECGGGCH
T ss_pred HHHHHHCCCCEEEEeeC-------ccccCHHHHHHHHhhCC-CCeEEEECCc-CHHHHHHHHhc-CCCEEEE-EchhcCc
Confidence 34567899999999751 111 2688999998886 6999999999 67889888873 5999999 8777654
Q ss_pred CCchHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 009196 412 PWIFTEIKEQRHWDITSGERLNIMKDFARF 441 (540)
Q Consensus 412 Pwif~eik~~~~~~~s~~erl~il~~~~~~ 441 (540)
+.+ ..+ ...+..+..++++..
T Consensus 192 ~~i----~~~-----~~~~i~~~a~~~~~~ 212 (224)
T 1vhc_A 192 KLI----QSN-----NWDEIGRLVREVIDI 212 (224)
T ss_dssp HHH----HTT-----CHHHHHHHHHHHHHH
T ss_pred chh----ccC-----CHHHHHHHHHHHHHH
Confidence 443 111 124445556666654
No 234
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=97.00 E-value=0.0064 Score=60.88 Aligned_cols=153 Identities=15% Similarity=0.172 Sum_probs=97.1
Q ss_pred CCCCHHHHHHHHHhCCCEEEeccceechhccCChhh----hh-------hhhcccCCCeEEEEecCC---cHHHHHHHHH
Q 009196 196 TVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASE----WA-------LLRRHSSEDLFGVQICGA---YPDTLARTVE 261 (540)
Q Consensus 196 ~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL~G~---~p~~~a~AA~ 261 (540)
+.-|.++-+++.+.|++++++.-..+ ....|.+.+ +. .+.+.....++++=+--. ++++..+.|.
T Consensus 23 tayD~~sA~l~e~aG~d~ilvGdsl~-~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~ 101 (264)
T 1m3u_A 23 TAYDYSFAKLFADEGLNVMLVGDSLG-MTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAA 101 (264)
T ss_dssp ECCSHHHHHHHHHHTCCEEEECTTHH-HHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHH
T ss_pred eCcCHHHHHHHHHcCCCEEEECHHHH-HHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHH
Confidence 77799999999999999988743222 223444332 11 122222233455444322 6888888888
Q ss_pred HHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEe---------cCCC-----CC-Ch
Q 009196 262 LIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKV---------RTGY-----FE-GK 326 (540)
Q Consensus 262 ~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKi---------R~G~-----~e-~~ 326 (540)
++. ++|+++|.|--| ..+.+.|+++.++ ++||.-=+ +.|+ .+ ..
T Consensus 102 rl~-kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~ggf~v~grt~~~a 160 (264)
T 1m3u_A 102 TVM-RAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG 160 (264)
T ss_dssp HHH-HTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTSSCCCCCSHHHH
T ss_pred HHH-HcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCCeEEEeCCHHHH
Confidence 887 489999999533 1344555555543 78876211 1122 11 12
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD 382 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd 382 (540)
+.+++=++.++++|+++|.+.+-. -+.+++|.+.+ ++|+||-|-
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp----------~~~a~~it~~l--~iP~igIGa 204 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVP----------VELAKRITEAL--AIPVIGIGA 204 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCC----------HHHHHHHHHHC--SSCEEEESS
T ss_pred HHHHHHHHHHHHCCCcEEEEecCC----------HHHHHHHHHhC--CCCEEEeCC
Confidence 467777888999999999997521 25688999999 799998763
No 235
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=96.95 E-value=0.025 Score=57.33 Aligned_cols=200 Identities=13% Similarity=0.065 Sum_probs=123.6
Q ss_pred cEEEccCCCCCCHHHHHHHHHhCCCEEEeccc-eechhccCChhh----hh-------hhhcccCCCeEEEEe---cCCc
Q 009196 188 KLYLAPLTTVGNLPFRRVCKVLGADVTCGEMA-MCTNLLQGQASE----WA-------LLRRHSSEDLFGVQI---CGAY 252 (540)
Q Consensus 188 rliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi-~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL---~G~~ 252 (540)
..+..| +.-|.++-+++.+.|.+.+++--. .+.. .|.+.. +. .+.+ ....|+++=+ +| +
T Consensus 15 ~~i~~~--~a~D~~sA~~~~~aG~~ai~vs~~~~a~~--~G~pD~~~vt~~em~~~~~~I~~-~~~~PviaD~d~Gyg-~ 88 (290)
T 2hjp_A 15 RLFTAM--AAHNPLVAKLAEQAGFGGIWGSGFELSAS--YAVPDANILSMSTHLEMMRAIAS-TVSIPLIADIDTGFG-N 88 (290)
T ss_dssp CCEEEE--ECSSHHHHHHHHHHTCSEEEECHHHHHHH--TTSCTTTCSCHHHHHHHHHHHHT-TCSSCEEEECTTTTS-S
T ss_pred CcEEEe--cCCCHHHHHHHHHcCCCEEEEChHHHHHh--CCCCCCCCCCHHHHHHHHHHHHh-cCCCCEEEECCCCCC-C
Confidence 344444 778999999999999998887632 2222 333321 11 1111 2345665533 35 8
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCc--cccccCCchHHHHHHHHhcccc-cccEEEEecCCC---CCCh
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGA--GSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGY---FEGK 326 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~--GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~---~e~~ 326 (540)
+....+.++.+. ++|+.+|.|--+.. ++++..-. |..|.. .+.+.+-|++++.+. ..++.|--|+-- ....
T Consensus 89 ~~~~~~~v~~l~-~aGa~gv~iED~~~-~k~cgH~~~~~k~l~p-~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~ 165 (290)
T 2hjp_A 89 AVNVHYVVPQYE-AAGASAIVMEDKTF-PKDTSLRTDGRQELVR-IEEFQGKIAAATAARADRDFVVIARVEALIAGLGQ 165 (290)
T ss_dssp HHHHHHHHHHHH-HHTCSEEEEECBCS-SCCC-------CCBCC-HHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCH
T ss_pred HHHHHHHHHHHH-HhCCeEEEEcCCCC-CccccccccCCCcccC-HHHHHHHHHHHHHhcccCCcEEEEeehHhhccccH
Confidence 888999999888 68999999986643 22332211 334443 333344445544442 334555556521 1234
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe---CCCCCHHHHHHHHhcCCC-cCee
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN---GDIYSYLDWNKHKSDCPE-LASC 402 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN---GdI~s~eDa~~~l~~~~g-aDgV 402 (540)
+++++=++.++++|+|.|.++++. .+.+.++++.+.++.++|+++| +...+.++ |.+ -| +..|
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~~~--------~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~e----L~~-lG~v~~v 232 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHSRQ--------KTPDEILAFVKSWPGKVPLVLVPTAYPQLTEAD----IAA-LSKVGIV 232 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCC--------SSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHH----HHT-CTTEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEeCCCC--------CCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHH----HHh-cCCeeEE
Confidence 778888899999999999998743 3346789999988434999987 33445544 444 68 9999
Q ss_pred eecHHHH
Q 009196 403 MIARGAL 409 (540)
Q Consensus 403 MIGRgaL 409 (540)
.+|-.++
T Consensus 233 ~~~~~~~ 239 (290)
T 2hjp_A 233 IYGNHAI 239 (290)
T ss_dssp EECSHHH
T ss_pred EechHHH
Confidence 9886655
No 236
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.90 E-value=0.0067 Score=60.59 Aligned_cols=120 Identities=11% Similarity=-0.012 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc-ccEEEEecC--CCCCChhHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KPITIKVRT--GYFEGKNRIDSLIAD 335 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iPVtVKiR~--G~~e~~~~~~~la~~ 335 (540)
-++.+. +.|+|.||+-+ .+|..+-.+.+.+.+-+++++++++ .+..+|+-+ +.-.+.+.....++.
T Consensus 90 E~~~Av-~~GAdEIDmVi----------nig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~i 158 (260)
T 1p1x_A 90 ETRAAI-AYGADEVDVVF----------PYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEI 158 (260)
T ss_dssp HHHHHH-HHTCSEEEEEC----------CHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEEec----------cHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHH
Confidence 334444 45999999853 2344444677888888888888763 244556544 222223335577788
Q ss_pred HHHcCCcEEEEecccccCccC-CCcCHHHHHHHHHH-----cCCCceEEEeCCCCCHHHHHHHHh
Q 009196 336 IGTWGASAVTVHGRTRQQRYS-KLADWDYIYQCARK-----ASDDLQVLGNGDIYSYLDWNKHKS 394 (540)
Q Consensus 336 leeaGvdaItVHgRtr~q~y~-g~adw~~I~~i~~~-----~~~~IPVIgNGdI~s~eDa~~~l~ 394 (540)
..++|+|+|-.+ .+|. +.|..+.++.+++. +..+++|-+.|||.+.+++.++++
T Consensus 159 a~eaGADfVKTS-----TGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ 218 (260)
T 1p1x_A 159 SIKAGADFIKTS-----TGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA 218 (260)
T ss_dssp HHHTTCSEEECC-----CSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH
T ss_pred HHHhCCCEEEeC-----CCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHH
Confidence 899999999653 2333 55777766666665 444799999999999999999876
No 237
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.89 E-value=0.014 Score=57.03 Aligned_cols=117 Identities=15% Similarity=0.044 Sum_probs=78.6
Q ss_pred hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEE--ecCCCCCChhHHHHHHHHHHHcCCcE
Q 009196 266 QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIK--VRTGYFEGKNRIDSLIADIGTWGASA 343 (540)
Q Consensus 266 ~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVK--iR~G~~e~~~~~~~la~~leeaGvda 343 (540)
+.|+|.||+-+ .+|..+-.+.+.+.+-+++++++.+- ..+| +-+++- +.++....++...++|+|+
T Consensus 77 ~~GAdEID~Vi----------nig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~eei~~a~~ia~eaGADf 144 (226)
T 1vcv_A 77 AEVADEIDVVA----------PIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEERYTLYDIIAEAGAHF 144 (226)
T ss_dssp TTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHHHHHHHHTCSE
T ss_pred HCCCCEEEEec----------chhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHHHHHHHHHHHHcCCCE
Confidence 46999999853 23444445778888888888877632 2455 333433 3456777888889999999
Q ss_pred EEEecccc------cCccCCCcCHHHHHHHHHH---cCCCceEEEeCCCCCHHHHHHHHh
Q 009196 344 VTVHGRTR------QQRYSKLADWDYIYQCARK---ASDDLQVLGNGDIYSYLDWNKHKS 394 (540)
Q Consensus 344 ItVHgRtr------~q~y~g~adw~~I~~i~~~---~~~~IPVIgNGdI~s~eDa~~~l~ 394 (540)
|-.+.... ...-.+.|..+-++.+++. ++.+++|-+.|||.+++++.++++
T Consensus 145 VKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i~ 204 (226)
T 1vcv_A 145 IKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIVD 204 (226)
T ss_dssp EECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHHH
T ss_pred EEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence 96542110 0001245666666655555 655799999999999999999887
No 238
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=96.85 E-value=0.0076 Score=58.31 Aligned_cols=149 Identities=11% Similarity=0.090 Sum_probs=93.3
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcc-----c------ccCCccccccCCchHHHHHHHH-----
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDI-----V------VNKGAGSCLLTKPMRMKGIIEA----- 305 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~-----v------~~~G~GsaLl~~p~~l~eIv~a----- 305 (540)
.+++.=|-+.+++.+.+.++.+. +.|++.|+|-+--|... . ..-|+|. ++. .+.+...+++
T Consensus 16 ~~~i~v~r~~~~~~~~~~~~al~-~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-vi~-~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 16 GPVVPVIVVKKLEHAVPMAKALV-AGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-VLN-PQQLAEVTEAGAQFA 92 (214)
T ss_dssp CSEEEEECCSSGGGHHHHHHHHH-HTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-CCS-HHHHHHHHHHTCSCE
T ss_pred CCEEEEEECCCHHHHHHHHHHHH-HcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-EEE-HHHHHHHHHcCCCEE
Confidence 45666777888888888888776 67899988875433210 0 0124444 332 2333332222
Q ss_pred ------------hcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcC
Q 009196 306 ------------TSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKAS 372 (540)
Q Consensus 306 ------------v~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~ 372 (540)
.+. .+.|+.. |.. + ..+ +..+.+.|+|+|.+|+- ... ..++++.++..++
T Consensus 93 ~~p~~d~~v~~~~~~-~g~~~i~----G~~-t---~~e-~~~A~~~Gad~v~~Fpa-------~~~gG~~~lk~i~~~~~ 155 (214)
T 1wbh_A 93 ISPGLTEPLLKAATE-GTIPLIP----GIS-T---VSE-LMLGMDYGLKEFKFFPA-------EANGGVKALQAIAGPFS 155 (214)
T ss_dssp EESSCCHHHHHHHHH-SSSCEEE----EES-S---HHH-HHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHTTCT
T ss_pred EcCCCCHHHHHHHHH-hCCCEEE----ecC-C---HHH-HHHHHHCCCCEEEEecC-------ccccCHHHHHHHhhhCC
Confidence 211 2344433 221 1 223 34556789999999761 111 2688999998886
Q ss_pred CCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 373 DDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 373 ~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
++||++.||| +++.+.+++.. .|+++|. |+++...+++
T Consensus 156 -~ipvvaiGGI-~~~n~~~~l~a-gg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 156 -QVRFCPTGGI-SPANYRDYLAL-KSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp -TCEEEEBSSC-CTTTHHHHHTS-TTBSCEE-EGGGSCHHHH
T ss_pred -CCeEEEECCC-CHHHHHHHHhc-CCCeEEE-eccccChhhh
Confidence 7999999999 67889998873 5999999 8877655544
No 239
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=96.79 E-value=0.0053 Score=61.14 Aligned_cols=163 Identities=9% Similarity=0.044 Sum_probs=109.5
Q ss_pred hhccCChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHH
Q 009196 223 NLLQGQASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGI 302 (540)
Q Consensus 223 ~l~~g~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eI 302 (540)
...+|....+..++. ...-|+---=|=-++.++.+|. .+|+|+|=|-+.| + .++.+.++
T Consensus 87 ~~F~Gs~~~L~~vr~-~v~lPvLrKDFiid~yQI~eAr-----~~GADaILLI~a~--------------L-~~~~l~~l 145 (258)
T 4a29_A 87 KYFNGSYETLRKIAS-SVSIPILMSDFIVKESQIDDAY-----NLGADTVLLIVKI--------------L-TERELESL 145 (258)
T ss_dssp TTTCCCHHHHHHHHT-TCSSCEEEESCCCSHHHHHHHH-----HHTCSEEEEEGGG--------------S-CHHHHHHH
T ss_pred CCCCCCHHHHHHHHH-hcCCCEeeccccccHHHHHHHH-----HcCCCeeehHHhh--------------c-CHHHHHHH
Confidence 455666554443332 2344543222234666666544 3499999885433 1 34456666
Q ss_pred HHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC
Q 009196 303 IEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD 382 (540)
Q Consensus 303 v~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd 382 (540)
++...+ ++..+.|-+.. . .+ +.++.+.|++.|-|-+|.-. +-..|.+...++...+|.++.+|+-+|
T Consensus 146 ~~~A~~-lGl~~LvEVh~-----~---~E-l~rAl~~~a~iIGINNRnL~---tf~vdl~~t~~L~~~ip~~~~~VsESG 212 (258)
T 4a29_A 146 LEYARS-YGMEPLILIND-----E---ND-LDIALRIGARFIGIMSRDFE---TGEINKENQRKLISMIPSNVVKVAKLG 212 (258)
T ss_dssp HHHHHH-TTCCCEEEESS-----H---HH-HHHHHHTTCSEEEECSBCTT---TCCBCHHHHHHHHTTSCTTSEEEEEES
T ss_pred HHHHHH-HhHHHHHhcch-----H---HH-HHHHhcCCCcEEEEeCCCcc---ccccCHHHHHHHHhhCCCCCEEEEcCC
Confidence 665543 46666665542 2 23 34455689999999888643 334688888999998887899999999
Q ss_pred CCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhc
Q 009196 383 IYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQ 421 (540)
Q Consensus 383 I~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~ 421 (540)
|.+++|+..+.. .|+|+|.||.+++..|.-..++.+|
T Consensus 213 I~t~~dv~~l~~--~G~~a~LVGealmr~~d~~~~Li~G 249 (258)
T 4a29_A 213 ISERNEIEELRK--LGVNAFLISSSLMRNPEKIKELIEG 249 (258)
T ss_dssp SCCHHHHHHHHH--TTCCEEEECHHHHHCTTHHHHHHC-
T ss_pred CCCHHHHHHHHH--CCCCEEEECHHHhCCCcHHHHHHcC
Confidence 999999999665 7999999999999999866666554
No 240
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=96.78 E-value=0.0059 Score=64.29 Aligned_cols=130 Identities=6% Similarity=-0.040 Sum_probs=94.7
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~le 337 (540)
|+.+. +.||..|-|..|-|... ....|..-..+++...++|++||+++ ++++.|..--+| +..++..+++.|+
T Consensus 160 a~~~~-~~G~~~~Kik~g~~~~~--~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~--~~~~A~~~~~~L~ 234 (400)
T 4dxk_A 160 AHSLL-EDGITAMKIWPFDAAAE--KTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMW--QLLPAMQIAKALT 234 (400)
T ss_dssp HHHHH-HTTCCEEEECTTHHHHH--HHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCB--CHHHHHHHHHHTG
T ss_pred HHHHH-HhCCCEEEEcCCCcccc--ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCC--CHHHHHHHHHHHh
Confidence 33444 46999999975522100 00011000123567788999999988 578888877788 4578999999999
Q ss_pred HcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 338 TWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 338 eaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
+.|+.+|- |.. .+.+++..+++++.+ ++||++.+.+.++.++.++++. ..+|.|++=
T Consensus 235 ~~~i~~iE-------eP~-~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~a~d~v~~d 291 (400)
T 4dxk_A 235 PYQTFWHE-------DPI-KMDSLSSLTRYAAVS--PAPISASETLGSRWAFRDLLET-GAAGVVMLD 291 (400)
T ss_dssp GGCCSEEE-------CCB-CTTSGGGHHHHHHHC--SSCEEECTTCCHHHHHHHHHHT-TCCCEEEEC
T ss_pred hcCCCEEE-------cCC-CcccHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHc-CCCCEEEeC
Confidence 99999885 222 334788889999988 7999999999999999999986 779999863
No 241
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=96.71 E-value=0.052 Score=55.08 Aligned_cols=201 Identities=15% Similarity=0.035 Sum_probs=120.1
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEeccc-eechhccCChhh----hh-------hhhcccCCCeEEEEe---cCC
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMA-MCTNLLQGQASE----WA-------LLRRHSSEDLFGVQI---CGA 251 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi-~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL---~G~ 251 (540)
+..+..| ++-|.++-+++.+.|.+.+++--. .+. ..|.+.. +. .+.+ ....|+++=+ +|
T Consensus 18 ~~~i~~~--~a~D~~sA~~~~~aG~~ai~vsg~~~a~--~lG~pD~~~vt~~em~~~~~~I~~-~~~~PviaD~d~Gyg- 91 (295)
T 1s2w_A 18 KDLEFIM--EAHNGLSARIVQEAGFKGIWGSGLSVSA--QLGVRDSNEASWTQVVEVLEFMSD-ASDVPILLDADTGYG- 91 (295)
T ss_dssp SSCEEEE--EECSHHHHHHHHHHTCSCEEECCHHHHH--TC---------CHHHHHHHHHHHH-TCSSCEEEECCSSCS-
T ss_pred CCcEEEe--cCCCHHHHHHHHHcCCCEEEeChHHHHH--hCCCCCCCCCCHHHHHHHHHHHHh-cCCCCEEecCCCCCC-
Confidence 3445545 788999999999999998877632 222 2343321 11 1111 2345666544 34
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCc--cccccCCchHHHHHHHHhcccc-cccEEEEecCCC---CCC
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGA--GSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGY---FEG 325 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~--GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~---~e~ 325 (540)
++....+.++.+. ++|+.+|.|--+.. ++++..-. |..|. ..+...+-|++++++- +.++.|--|+-- ...
T Consensus 92 ~~~~v~~~v~~l~-~aGaagv~iED~~~-~k~cgH~gg~~k~l~-p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g 168 (295)
T 1s2w_A 92 NFNNARRLVRKLE-DRGVAGACLEDKLF-PKTNSLHDGRAQPLA-DIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWG 168 (295)
T ss_dssp SHHHHHHHHHHHH-HTTCCEEEEECBCC---------CTTCCBC-CHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCC
T ss_pred CHHHHHHHHHHHH-HcCCcEEEECCCCC-CccccccCCCCCccc-CHHHHHHHHHHHHHhcccCCcEEEEeehHHhcccc
Confidence 5778888888887 79999999986643 22332111 23343 3333344444444433 445555556521 122
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC---CCCHHHHHHHHhcCCCcCee
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD---IYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd---I~s~eDa~~~l~~~~gaDgV 402 (540)
.+++++=++.++++|+|.|.+++. ..+.+.++++.+.++.++|+++|-. -.+.+ + |.+ -|+..|
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~---e-L~~-lGv~~v 235 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSK--------KADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTD---H-FRD-MGVSMV 235 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCC--------SSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHH---H-HHH-HTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCC--------CCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHH---H-HHH-cCCcEE
Confidence 467888899999999999999842 2345778888888833499999843 34433 3 333 689999
Q ss_pred eecHHHH
Q 009196 403 MIARGAL 409 (540)
Q Consensus 403 MIGRgaL 409 (540)
.+|-.++
T Consensus 236 ~~~~~~~ 242 (295)
T 1s2w_A 236 IWANHNL 242 (295)
T ss_dssp EECSHHH
T ss_pred EEChHHH
Confidence 9886554
No 242
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.70 E-value=0.0086 Score=64.80 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
+..+.++.+.++|++.|.|+.... + ....++.++++++.++ ++||++ |++.+.+++..+.+ .|||+|.+|
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g---~-~~~~~~~v~~i~~~~p-~~~Vi~-g~v~t~e~a~~l~~--aGaD~I~vg 298 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHG---H-SKGVIERVRWVKQTFP-DVQVIG-GNIATAEAAKALAE--AGADAVKVG 298 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCC---S-BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHH--TTCSEEEEC
T ss_pred chHHHHHHHhhcccceEEecccCC---c-chhHHHHHHHHHHHCC-CceEEE-eeeCcHHHHHHHHH--cCCCEEEEC
Confidence 456788899999999999985432 2 1234688999999986 689887 88999999998765 799999985
No 243
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=96.70 E-value=0.011 Score=59.74 Aligned_cols=119 Identities=10% Similarity=-0.015 Sum_probs=78.4
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCch---HHHHHHHHhcccccccEEEEecC--CCCCChhHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPM---RMKGIIEATSGTVDKPITIKVRT--GYFEGKNRIDSLI 333 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~---~l~eIv~av~~~v~iPVtVKiR~--G~~e~~~~~~~la 333 (540)
-++.+. +.|+|.||+-+ .+|..+-.+.+ .+.+-+++++++++ +..+|+-+ +.-.+.+.....+
T Consensus 111 E~~~Av-~~GAdEIDmVi----------nig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~A~ 178 (281)
T 2a4a_A 111 DTEKAL-DDGADEIDLVI----------NYKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIKTT 178 (281)
T ss_dssp HHHHHH-HHTCSEEEEEC----------CHHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEEec----------chHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHH
Confidence 334444 45999999853 23433445666 78888888888874 24556544 2222333355777
Q ss_pred HHHHHcCCcEEEEecccccCccC-CCcCHHHHHHHHHHc----------CCCceEEEeCCCCCHHHHHHHHh
Q 009196 334 ADIGTWGASAVTVHGRTRQQRYS-KLADWDYIYQCARKA----------SDDLQVLGNGDIYSYLDWNKHKS 394 (540)
Q Consensus 334 ~~leeaGvdaItVHgRtr~q~y~-g~adw~~I~~i~~~~----------~~~IPVIgNGdI~s~eDa~~~l~ 394 (540)
+...++|+|+|-.+. +|. +.|..+-+..+++.+ ..+++|-+.|||.|.+++.++++
T Consensus 179 ~ia~eaGADfVKTST-----Gf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~ 245 (281)
T 2a4a_A 179 LAVLNGNADFIKTST-----GKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYIL 245 (281)
T ss_dssp HHHHTTTCSEEECCC-----SCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHH
T ss_pred HHHHHhCCCEEEeCC-----CCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHH
Confidence 888999999996531 233 446555555555443 44799999999999999999886
No 244
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=96.69 E-value=0.02 Score=57.83 Aligned_cols=160 Identities=14% Similarity=0.128 Sum_probs=95.1
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChhh----hh-------hhhcccCCCeEEE-Eec-CC--
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASE----WA-------LLRRHSSEDLFGV-QIC-GA-- 251 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e----~~-------ll~~~~~e~p~~v-QL~-G~-- 251 (540)
+..+..| +.-|.++-+++.+.|++++.+.-..+. ...|...+ +. .+.+. ...++++ =+- |+
T Consensus 33 g~~i~~~--tayDa~sA~l~e~aG~d~ilvGdSl~~-~~lG~~dt~~vTldemi~h~~aV~r~-~~~~~vvaD~pfgsy~ 108 (281)
T 1oy0_A 33 GHKWAML--TAYDYSTARIFDEAGIPVLLVGDSAAN-VVYGYDTTVPISIDELIPLVRGVVRG-APHALVVADLPFGSYE 108 (281)
T ss_dssp TCCEEEE--ECCSHHHHHHHHTTTCCEEEECTTHHH-HTTCCSSSSSCCGGGTHHHHHHHHHH-CTTSEEEEECCTTSST
T ss_pred CCcEEEE--eCcCHHHHHHHHHcCCCEEEECHHHHH-HHcCCCCCCCCCHHHHHHHHHHHHhc-CCCCeEEEECCCCccc
Confidence 3344444 778999999999999998876532221 12333321 11 11222 2334443 332 23
Q ss_pred -cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEE---------EEecCC
Q 009196 252 -YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPIT---------IKVRTG 321 (540)
Q Consensus 252 -~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVt---------VKiR~G 321 (540)
++++..+.|.++.+++|+++|.|--| ..+.+.|+++.++ ++||. +..+-|
T Consensus 109 ~s~~~a~~na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~gg 168 (281)
T 1oy0_A 109 AGPTAALAAATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTLGG 168 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC--------
T ss_pred CCHHHHHHHHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceecccCC
Confidence 57776665555544799999999643 1334455555443 67775 211111
Q ss_pred C-----CCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC
Q 009196 322 Y-----FEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD 382 (540)
Q Consensus 322 ~-----~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd 382 (540)
+ .+..+.+++=++.++++|+++|.+.+-. -+.+++|.+.+ ++|+||-|-
T Consensus 169 f~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~vp----------~~~a~~it~~l--~iP~igIGa 222 (281)
T 1oy0_A 169 FRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVP----------AELATQITGKL--TIPTVGIGA 222 (281)
T ss_dssp ------CHHHHHHHHHHHHHHHHTCSEEEEESCC----------HHHHHHHHHHC--SSCEEEESS
T ss_pred eEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecCC----------HHHHHHHHHhC--CCCEEEeCC
Confidence 1 1112567777888899999999997521 25688999999 799998763
No 245
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=96.67 E-value=0.035 Score=55.85 Aligned_cols=190 Identities=16% Similarity=0.115 Sum_probs=127.2
Q ss_pred EEccCCCCCCHHHHHHHHHhCCCEEEecc-ceechhccCChhh----hh-------hhhcccCCCeEEEEe---cCCcHH
Q 009196 190 YLAPLTTVGNLPFRRVCKVLGADVTCGEM-AMCTNLLQGQASE----WA-------LLRRHSSEDLFGVQI---CGAYPD 254 (540)
Q Consensus 190 iLAPM~~vtdlpfR~l~~~~Gadl~~TEm-i~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL---~G~~p~ 254 (540)
+..| +.-|.++-+++.+.|.+.+++-- ..+. ..|.+.. +. .+.+. ...|+++=+ +|.+++
T Consensus 18 i~~~--~a~D~~sA~~~~~aG~~ai~vsg~s~a~--~~G~pD~~~vt~~em~~~~~~I~~~-~~~pviaD~d~Gyg~~~~ 92 (275)
T 2ze3_A 18 FLLP--NAWDVASARLLEAAGFTAIGTTSAGIAH--ARGRTDGQTLTRDEMGREVEAIVRA-VAIPVNADIEAGYGHAPE 92 (275)
T ss_dssp EEEC--EESSHHHHHHHHHHTCSCEEECHHHHHH--HSCCCSSSSSCHHHHHHHHHHHHHH-CSSCEEEECTTCSSSSHH
T ss_pred eeEe--cccCHHHHHHHHHcCCCEEEECcHHHHH--hCCCCCCCCCCHHHHHHHHHHHHhh-cCCCEEeecCCCCCCCHH
Confidence 4444 77899999999999999887763 2222 2344321 11 11111 235666543 466899
Q ss_pred HHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEecCCCC--------
Q 009196 255 TLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVRTGYF-------- 323 (540)
Q Consensus 255 ~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR~G~~-------- 323 (540)
...+.++.+. ++|+.+|.|--+... .|..| -..+.+.+-|++++++. ++|+.|--|+--.
T Consensus 93 ~~~~~v~~l~-~aGaagv~iED~~~~-------~~k~l-~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~ 163 (275)
T 2ze3_A 93 DVRRTVEHFA-ALGVAGVNLEDATGL-------TPTEL-YDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATD 163 (275)
T ss_dssp HHHHHHHHHH-HTTCSEEEEECBCSS-------SSSCB-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSH
T ss_pred HHHHHHHHHH-HcCCcEEEECCCcCC-------CCCcc-CCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccc
Confidence 9999999888 699999999866431 12333 35566666677776653 6888888887321
Q ss_pred -CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC--CCCCHHHHHHHHhcCCCcC
Q 009196 324 -EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG--DIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 324 -e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG--dI~s~eDa~~~l~~~~gaD 400 (540)
+..+++++=++.++++|+|.|.+++. .+.+.++++.+.+ ++|+-.++ ...+.++. .+ -|+.
T Consensus 164 ~~~~~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~--~~P~n~~~~~~~~~~~eL----~~-lGv~ 227 (275)
T 2ze3_A 164 EERLAETVRRGQAYADAGADGIFVPLA---------LQSQDIRALADAL--RVPLNVMAFPGSPVPRAL----LD-AGAA 227 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTC---------CCHHHHHHHHHHC--SSCEEEECCTTSCCHHHH----HH-TTCS
T ss_pred hhhHHHHHHHHHHHHHCCCCEEEECCC---------CCHHHHHHHHHhc--CCCEEEecCCCCCCHHHH----HH-cCCc
Confidence 02356777788889999999999753 3457889999998 68886663 45666543 33 6899
Q ss_pred eeeecHHHH
Q 009196 401 SCMIARGAL 409 (540)
Q Consensus 401 gVMIGRgaL 409 (540)
.|.+|-.++
T Consensus 228 ~v~~~~~~~ 236 (275)
T 2ze3_A 228 RVSFGQSLM 236 (275)
T ss_dssp EEECTTHHH
T ss_pred EEEEChHHH
Confidence 999885544
No 246
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.61 E-value=0.002 Score=61.72 Aligned_cols=74 Identities=11% Similarity=-0.005 Sum_probs=54.4
Q ss_pred HHHHHcCCcEEEEecc--c-ccCccCCCcCHHHHHHHHHHc-CCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 334 ADIGTWGASAVTVHGR--T-RQQRYSKLADWDYIYQCARKA-SDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 334 ~~leeaGvdaItVHgR--t-r~q~y~g~adw~~I~~i~~~~-~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
..+. .|+|+|.+.+- | ....+.++.+|++++.+++.+ . ++|||+-|||. ++.+.+++. .|++||.+++++.
T Consensus 102 ~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~-~iPviaiGGI~-~~nv~~~~~--~Ga~gVav~s~i~ 176 (210)
T 3ceu_A 102 KNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKII-DSKVMALGGIN-EDNLLEIKD--FGFGGAVVLGDLW 176 (210)
T ss_dssp HTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCS-STTEEEESSCC-TTTHHHHHH--TTCSEEEESHHHH
T ss_pred HHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCC-CCCEEEECCCC-HHHHHHHHH--hCCCEEEEhHHhH
Confidence 3345 89999997542 1 122233456899999998863 2 69999999996 899999886 8999999999997
Q ss_pred hCC
Q 009196 410 IKP 412 (540)
Q Consensus 410 ~nP 412 (540)
..+
T Consensus 177 ~~~ 179 (210)
T 3ceu_A 177 NKF 179 (210)
T ss_dssp TTC
T ss_pred cCC
Confidence 643
No 247
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.61 E-value=0.052 Score=55.43 Aligned_cols=201 Identities=14% Similarity=0.084 Sum_probs=119.7
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEe-ccceechhccCChh----hhh-------hhhcccC-CCeEEEEe---cC
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCG-EMAMCTNLLQGQAS----EWA-------LLRRHSS-EDLFGVQI---CG 250 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~T-Emi~a~~l~~g~~~----e~~-------ll~~~~~-e~p~~vQL---~G 250 (540)
++.++.| ++-|..+-+++.+.|.+.+++ ....+.. ..|.+. ++. .+.+... ..|+++=+ +|
T Consensus 24 ~~~i~~~--~a~D~~sA~l~e~aGf~ai~vsG~~~a~s-~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg 100 (307)
T 3lye_A 24 DELIVCP--GVYDGLSARTAMELGFKSLYMTGAGTTAS-RLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG 100 (307)
T ss_dssp CCCEEEE--EECSHHHHHHHHHTTCSCEEECHHHHHHH-HHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS
T ss_pred CCeEEEe--cCcCHHHHHHHHHcCCCEEEeccHHHHHH-hcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC
Confidence 3455555 778999999999999998875 3222211 122221 111 1122222 46776544 34
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEecCCCC--CC
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVRTGYF--EG 325 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR~G~~--e~ 325 (540)
++....+.++.+. ++|+.+|.|--... ++.+..-.|..|....+.+.+ |++++++. +.++.|--|+-.. ..
T Consensus 101 -~~~~v~~~v~~l~-~aGaagv~iEDq~~-~k~cgh~~gk~l~~~~e~~~r-I~Aa~~A~~~~~~d~~I~ARTDa~~~~g 176 (307)
T 3lye_A 101 -GPIMVARTVEHYI-RSGVAGAHLEDQIL-TKRCGHLSGKKVVSRDEYLVR-IRAAVATKRRLRSDFVLIARTDALQSLG 176 (307)
T ss_dssp -SHHHHHHHHHHHH-HTTCCEEEECCBCC-CC--------CBCCHHHHHHH-HHHHHHHHHHTTCCCEEEEEECCHHHHC
T ss_pred -CHHHHHHHHHHHH-HcCCeEEEEcCCCC-CcccCCCCCCeecCHHHHHHH-HHHHHHHHHhcCCCeEEEEechhhhccC
Confidence 5888889998887 68999999975542 222222223344433333333 44444432 5667777776321 12
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe---CC---CCCHHHHHHHHhcCCCc
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN---GD---IYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN---Gd---I~s~eDa~~~l~~~~ga 399 (540)
.+++++-++.+.++|+|.|-+++. .+.+.+.++.+.++ ++||..| |+ ..+.++..+ -|+
T Consensus 177 ldeAi~Ra~ay~eAGAD~ifi~~~---------~~~~~~~~i~~~~~-~~Pv~~n~~~~g~~p~~t~~eL~~-----lGv 241 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGLLEGF---------RSKEQAAAAVAALA-PWPLLLNSVENGHSPLITVEEAKA-----MGF 241 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCC---------SCHHHHHHHHHHHT-TSCBEEEEETTSSSCCCCHHHHHH-----HTC
T ss_pred HHHHHHHHHHHHHCCCCEEEecCC---------CCHHHHHHHHHHcc-CCceeEEeecCCCCCCCCHHHHHH-----cCC
Confidence 457888888889999999999864 34567888888874 4888776 32 345555443 578
Q ss_pred CeeeecHHHH
Q 009196 400 ASCMIARGAL 409 (540)
Q Consensus 400 DgVMIGRgaL 409 (540)
..|..+-.++
T Consensus 242 ~~v~~~~~~~ 251 (307)
T 3lye_A 242 RIMIFSFATL 251 (307)
T ss_dssp SEEEEETTTH
T ss_pred eEEEEChHHH
Confidence 8888765443
No 248
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=96.57 E-value=0.002 Score=64.21 Aligned_cols=80 Identities=8% Similarity=-0.068 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+..++|+.+.+.|++.+++-.-+. .+.+.|+++++.+ .+||...|||.+. ++.+++ .|||-|.+|..
T Consensus 39 dp~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~--~~pv~vgGGir~~-~~~~~l---~Ga~~Viigs~ 105 (260)
T 2agk_A 39 PSSYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQES--PQFLQVGGGINDT-NCLEWL---KWASKVIVTSW 105 (260)
T ss_dssp CHHHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHS--TTTSEEESSCCTT-THHHHT---TTCSCEEECGG
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcC--CceEEEeCCCCHH-HHHHHh---cCCCEEEECcH
Confidence 467899999999999998843332 5788999999998 6999999999987 999977 58999999999
Q ss_pred HHhC-----CCchHHHHh
Q 009196 408 ALIK-----PWIFTEIKE 420 (540)
Q Consensus 408 aL~n-----Pwif~eik~ 420 (540)
++.| |.++.++.+
T Consensus 106 a~~~~g~~~p~~~~~~~~ 123 (260)
T 2agk_A 106 LFTKEGHFQLKRLERLTE 123 (260)
T ss_dssp GBCTTCCBCHHHHHHHHH
T ss_pred HHhhcCCCCHHHHHHHHH
Confidence 9999 988888754
No 249
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=96.55 E-value=0.042 Score=52.53 Aligned_cols=136 Identities=13% Similarity=0.090 Sum_probs=86.3
Q ss_pred EEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCC
Q 009196 245 GVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFE 324 (540)
Q Consensus 245 ~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e 324 (540)
-+-++ -.|+.+.+ .+. ++|+|.|-+|.... .+-+.++++.+++ .+.++.+++-.++.
T Consensus 62 D~kl~-dip~t~~~---~~~-~~Gad~itvh~~~g----------------~~~l~~~~~~~~~-~g~~~~~~ll~~~t- 118 (216)
T 1q6o_A 62 DAKIA-DAGKILSR---MCF-EANADWVTVICCAD----------------INTAKGALDVAKE-FNGDVQIELTGYWT- 118 (216)
T ss_dssp EEEEC-SCHHHHHH---HHH-HTTCSEEEEETTSC----------------HHHHHHHHHHHHH-TTCEEEEEECSCCC-
T ss_pred EEEec-ccHHHHHH---HHH-hCCCCEEEEeccCC----------------HHHHHHHHHHHHH-cCCCceeeeeeCCC-
Confidence 35555 35777766 333 57999999995321 1234455666654 36666555532432
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecc--cccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGR--TRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgR--tr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
. .-+..+++.|++.+.+|-- +...++.+ ..+.++.+++..+.++||+.-|||. ++.+.++++ .|||+|
T Consensus 119 -~----~~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~~--aGad~i 188 (216)
T 1q6o_A 119 -W----EQAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFKG--IPIHVF 188 (216)
T ss_dssp -H----HHHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGTT--SCCSEE
T ss_pred -h----hhHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHHH--cCCCEE
Confidence 1 1234555668877777532 22233333 2466777777664358999999997 788877665 799999
Q ss_pred eecHHHHhCCC
Q 009196 403 MIARGALIKPW 413 (540)
Q Consensus 403 MIGRgaL~nPw 413 (540)
.+||+.+..+.
T Consensus 189 vvG~~I~~a~d 199 (216)
T 1q6o_A 189 IAGRSIRDAAS 199 (216)
T ss_dssp EESHHHHTSSC
T ss_pred EEeehhcCCCC
Confidence 99999987655
No 250
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=96.52 E-value=0.016 Score=60.20 Aligned_cols=134 Identities=5% Similarity=0.063 Sum_probs=100.1
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc---ccEEEEec
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD---KPITIKVR 319 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~---iPVtVKiR 319 (540)
|+...|.+.+++.+.+.|+.+. ..||..|-|..|. .+++.-.+.|++++++++ +.+.|...
T Consensus 153 p~~~~i~~~~~e~~~~~a~~~~-~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN 216 (377)
T 2pge_A 153 PVNGLIWMGEAAFMQEQIEAKL-AEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDAN 216 (377)
T ss_dssp EBCEEECCCCHHHHHHHHHHHH-HTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECT
T ss_pred EEeEEecCCCHHHHHHHHHHHH-HHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECC
Confidence 4444566778998888777765 4699999997653 246667778888888764 56777666
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHH--HHHHHhcCC
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLD--WNKHKSDCP 397 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eD--a~~~l~~~~ 397 (540)
-+|+ ..++.++++.|++.++.+| +|.. .+.+|+..+++++.+ ++||.+.=.+.+..+ +.++++. .
T Consensus 217 ~~~~--~~~a~~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~i~~-~ 283 (377)
T 2pge_A 217 GAFS--PANAPQRLKRLSQFHLHSI-------EQPI-RQHQWSEMAALCANS--PLAIALDEELIGLGAEQRSAMLDA-I 283 (377)
T ss_dssp TBBC--TTTHHHHHHHHHTTCCSEE-------ECCB-CSSCHHHHHHHHHHC--SSCEEESGGGTTCCTHHHHHHHHH-H
T ss_pred CCCC--HHHHHHHHHHHhcCCCcEE-------EccC-CcccHHHHHHHHhhC--CCcEEECCccCCcchHHHHHHHHh-C
Confidence 6774 4678899999999988876 3443 346899999999988 699999999988888 6677765 6
Q ss_pred CcCeeeec
Q 009196 398 ELASCMIA 405 (540)
Q Consensus 398 gaDgVMIG 405 (540)
.+|.|++=
T Consensus 284 a~d~i~ik 291 (377)
T 2pge_A 284 RPQYIILK 291 (377)
T ss_dssp CCSEEEEC
T ss_pred CCCEEEEC
Confidence 78888763
No 251
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=96.50 E-value=0.014 Score=61.05 Aligned_cols=121 Identities=12% Similarity=0.149 Sum_probs=91.4
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+++.+.+.|+.+. ..||..|-|..| | +.-.+.|+++++++ ++.+.|-.--+|+ ..++
T Consensus 160 ~~~e~~~~~a~~~~-~~G~~~~KiKvg-~-----------------~~d~~~v~avr~a~~~~~l~vDaN~~~~--~~~a 218 (393)
T 1wuf_A 160 QNVETLLQLVNQYV-DQGYERVKLKIA-P-----------------NKDIQFVEAVRKSFPKLSLMADANSAYN--REDF 218 (393)
T ss_dssp SCHHHHHHHHHHHH-HHTCCEEEEECB-T-----------------TBSHHHHHHHHTTCTTSEEEEECTTCCC--GGGH
T ss_pred CCHHHHHHHHHHHH-HHhhHhheeccC-h-----------------HHHHHHHHHHHHHcCCCEEEEECCCCCC--HHHH
Confidence 46888888777665 459999999754 1 11235577787776 4556666666774 4567
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
++++.|++.++.+|- |.. .+.||+..+++++.+ ++||.+.-.+.+..++.++++. ..+|.|++
T Consensus 219 -~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~i 281 (393)
T 1wuf_A 219 -LLLKELDQYDLEMIE-------QPF-GTKDFVDHAWLQKQL--KTRICLDENIRSVKDVEQAHSI-GSCRAINL 281 (393)
T ss_dssp -HHHHTTGGGTCSEEE-------CCS-CSSCSHHHHHHHTTC--SSEEEECTTCCSHHHHHHHHHH-TCCSEEEE
T ss_pred -HHHHHHHhCCCeEEE-------CCC-CCcCHHHHHHHHHhC--CCCEEECCCcCCHHHHHHHHHh-CCCCEEEe
Confidence 899999999988874 443 345788889999887 6999999999999999998886 67898886
No 252
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=96.50 E-value=0.063 Score=51.02 Aligned_cols=132 Identities=10% Similarity=-0.035 Sum_probs=84.3
Q ss_pred eEEEEec--CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC
Q 009196 243 LFGVQIC--GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~--G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~ 320 (540)
++=+-++ ++.|..++ +.+. ++|+|.|-+|.... .+ +++.+++.. -|++...+
T Consensus 55 ~~D~kl~DI~~t~~~~v---~~~~-~~Gad~vtvh~~~g----------------~~----~i~~~~~~~--gv~vl~~t 108 (208)
T 2czd_A 55 IADLKLADIPNTNRLIA---RKVF-GAGADYVIVHTFVG----------------RD----SVMAVKELG--EIIMVVEM 108 (208)
T ss_dssp EEEEEECSCHHHHHHHH---HHHH-HTTCSEEEEESTTC----------------HH----HHHHHHTTS--EEEEECCC
T ss_pred EEEeeeCchHHHHHHHH---HHHH-hcCCCEEEEeccCC----------------HH----HHHHHHHhC--CcEEEEec
Confidence 4456666 66665544 4444 57999999995321 11 244444433 34444444
Q ss_pred CCCC---C-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCH-HHHHHHHhc
Q 009196 321 GYFE---G-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSY-LDWNKHKSD 395 (540)
Q Consensus 321 G~~e---~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~-eDa~~~l~~ 395 (540)
...+ . .+.+..++....+.|++.+.+.+. ..+.++++++..+ .-+++..|||... .++.++++
T Consensus 109 ~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~-~~~~iv~gGI~~~g~~~~~~~~- 176 (208)
T 2czd_A 109 SHPGALEFINPLTDRFIEVANEIEPFGVIAPGT----------RPERIGYIRDRLK-EGIKILAPGIGAQGGKAKDAVK- 176 (208)
T ss_dssp CSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS----------STHHHHHHHHHSC-TTCEEEECCCCSSTTHHHHHHH-
T ss_pred CCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCC-CCeEEEECCCCCCCCCHHHHHH-
Confidence 3221 1 344667778888999999866432 2356778888775 3457799999752 26777676
Q ss_pred CCCcCeeeecHHHHhCCC
Q 009196 396 CPELASCMIARGALIKPW 413 (540)
Q Consensus 396 ~~gaDgVMIGRgaL~nPw 413 (540)
.|+|++.+||+.+..+.
T Consensus 177 -aGad~vvvGr~I~~a~d 193 (208)
T 2czd_A 177 -AGADYIIVGRAIYNAPN 193 (208)
T ss_dssp -HTCSEEEECHHHHTSSS
T ss_pred -cCCCEEEEChHHhcCCC
Confidence 69999999999998654
No 253
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.48 E-value=0.0052 Score=59.06 Aligned_cols=145 Identities=11% Similarity=0.082 Sum_probs=81.1
Q ss_pred hhhcccCCCeEE--EEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc
Q 009196 234 LLRRHSSEDLFG--VQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD 311 (540)
Q Consensus 234 ll~~~~~e~p~~--vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~ 311 (540)
.++..-.+.++. +-+. ..|+.+++. +. ++|+|+|-+|...+ .+.+.++++.+++. +
T Consensus 52 ~lr~~~~~~~i~ld~~l~-d~p~~~~~~---~~-~aGad~i~vh~~~~----------------~~~~~~~~~~~~~~-g 109 (218)
T 3jr2_A 52 TLRHNHPNHILVCDMKTT-DGGAILSRM---AF-EAGADWITVSAAAH----------------IATIAACKKVADEL-N 109 (218)
T ss_dssp HHHHHCTTSEEEEEEEEC-SCHHHHHHH---HH-HHTCSEEEEETTSC----------------HHHHHHHHHHHHHH-T
T ss_pred HHHHhCCCCcEEEEEeec-ccHHHHHHH---HH-hcCCCEEEEecCCC----------------HHHHHHHHHHHHHh-C
Confidence 344332344443 4444 456665543 33 56999999984321 23345666666543 4
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWN 390 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~ 390 (540)
+++.+. -+|.. +. +-+..+.+.|++.+.++--...+ ..|. ..-+.+..+++....++||++.||| +++.+.
T Consensus 110 ~~~~~d-~l~~~-T~----~~~~~~~~~g~d~v~~~~~~~~~-~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI-~~~~~~ 181 (218)
T 3jr2_A 110 GEIQIE-IYGNW-TM----QDAKAWVDLGITQAIYHRSRDAE-LAGIGWTTDDLDKMRQLSALGIELSITGGI-VPEDIY 181 (218)
T ss_dssp CEEEEE-CCSSC-CH----HHHHHHHHTTCCEEEEECCHHHH-HHTCCSCHHHHHHHHHHHHTTCEEEEESSC-CGGGGG
T ss_pred Ccccee-eeecC-CH----HHHHHHHHcCccceeeeeccccc-cCCCcCCHHHHHHHHHHhCCCCCEEEECCC-CHHHHH
Confidence 443332 23332 22 22344566799998775321111 1121 1223344444432116999999999 688888
Q ss_pred HHHhcCCCcCeeeecHHHHh
Q 009196 391 KHKSDCPELASCMIARGALI 410 (540)
Q Consensus 391 ~~l~~~~gaDgVMIGRgaL~ 410 (540)
+++. .|||+|.+||++..
T Consensus 182 ~~~~--aGAd~vvvGsaI~~ 199 (218)
T 3jr2_A 182 LFEG--IKTKTFIAGRALAG 199 (218)
T ss_dssp GGTT--SCEEEEEESGGGSH
T ss_pred HHHH--cCCCEEEEchhhcC
Confidence 8665 79999999998764
No 254
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=96.30 E-value=0.071 Score=54.30 Aligned_cols=200 Identities=19% Similarity=0.160 Sum_probs=119.5
Q ss_pred cEEEccCCCCCCHHHHHHHHHhCCCEEEe-ccceechhccCChh----hhh-------hhhcccCCCeEEEEe---cCCc
Q 009196 188 KLYLAPLTTVGNLPFRRVCKVLGADVTCG-EMAMCTNLLQGQAS----EWA-------LLRRHSSEDLFGVQI---CGAY 252 (540)
Q Consensus 188 rliLAPM~~vtdlpfR~l~~~~Gadl~~T-Emi~a~~l~~g~~~----e~~-------ll~~~~~e~p~~vQL---~G~~ 252 (540)
+.++.| ++-|..+-+++.+.|.+.+++ ....+.. ..|.+. ++. .+.+-....|+++=+ +| +
T Consensus 18 ~~i~~~--~a~D~~sA~l~e~aGf~ai~vsG~~~a~~-~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg-~ 93 (302)
T 3fa4_A 18 SFIVAP--GVYDGLSARVALSAGFDALYMTGAGTAAS-VHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYG-G 93 (302)
T ss_dssp CCEEEE--EECSHHHHHHHHTTTCSCEEECHHHHHHH-HHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTS-S
T ss_pred CeEEEe--cCcCHHHHHHHHHcCCCEEEeCcHHHHHH-HcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCC-C
Confidence 345555 778999999999999998875 3222211 122221 111 112222356776554 34 5
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc---ccccEEEEecCCCC--CChh
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT---VDKPITIKVRTGYF--EGKN 327 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~---v~iPVtVKiR~G~~--e~~~ 327 (540)
+....+.++.+. ++|+.+|.|--... ++.+..-.|..|....+.+.+| ++++++ .+.++.|=-|+-.. ...+
T Consensus 94 ~~~v~~tv~~l~-~aGaagv~iEDq~~-~Krcgh~~gk~l~~~~e~~~rI-~Aa~~A~~~~~~d~~I~ARTDa~~~~gld 170 (302)
T 3fa4_A 94 PIMVARTTEQYS-RSGVAAFHIEDQVQ-TKRCGHLAGKILVDTDTYVTRI-RAAVQARQRIGSDIVVIARTDSLQTHGYE 170 (302)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEECSBCC-C-------CCCBCCHHHHHHHH-HHHHHHHHHHTCCCEEEEEECCHHHHCHH
T ss_pred HHHHHHHHHHHH-HcCCcEEEECCCCC-CcccCCCCCCeecCHHHHHHHH-HHHHHHHHhcCCCEEEEEEecccccCCHH
Confidence 888889999887 68999999975432 2222222244444433444444 444333 25566666676321 2346
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe----CC--CCCHHHHHHHHhcCCCcCe
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN----GD--IYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN----Gd--I~s~eDa~~~l~~~~gaDg 401 (540)
++++-++...++|+|.|-+++- .+.+.+.++.+.++ ++|+..| |. ..+.++..+ -|+..
T Consensus 171 eAi~Ra~ay~eAGAD~ifi~g~---------~~~~ei~~~~~~~~-~~Pl~~n~~~~g~~p~~~~~eL~~-----lGv~~ 235 (302)
T 3fa4_A 171 ESVARLRAARDAGADVGFLEGI---------TSREMARQVIQDLA-GWPLLLNMVEHGATPSISAAEAKE-----MGFRI 235 (302)
T ss_dssp HHHHHHHHHHTTTCSEEEETTC---------CCHHHHHHHHHHTT-TSCEEEECCTTSSSCCCCHHHHHH-----HTCSE
T ss_pred HHHHHHHHHHHcCCCEEeecCC---------CCHHHHHHHHHHhc-CCceeEEEecCCCCCCCCHHHHHH-----cCCCE
Confidence 7888888899999999999863 24567888988884 4788776 22 345555444 57888
Q ss_pred eeecHHHH
Q 009196 402 CMIARGAL 409 (540)
Q Consensus 402 VMIGRgaL 409 (540)
|..+-.++
T Consensus 236 v~~~~~~~ 243 (302)
T 3fa4_A 236 IIFPFAAL 243 (302)
T ss_dssp EEETTTTH
T ss_pred EEEchHHH
Confidence 87774443
No 255
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=96.25 E-value=0.066 Score=53.20 Aligned_cols=188 Identities=14% Similarity=0.029 Sum_probs=119.4
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEecc-ceechhccCChhh----hh-------hhhcccCCCeEEEEe---cCC
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEM-AMCTNLLQGQASE----WA-------LLRRHSSEDLFGVQI---CGA 251 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEm-i~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL---~G~ 251 (540)
+..++.| ++-|.++-+++.+.|++.+++-- ..+. ..|.+.. +. .+.+. ...|+++=+ +|.
T Consensus 19 ~~~i~~~--~ayD~~sA~~~~~aG~dai~vg~~s~a~--~~G~pD~~~vt~~em~~~~~~I~r~-~~~pviaD~~~Gyg~ 93 (255)
T 2qiw_A 19 GKLLVLP--TVWDTWSAGLVEEAGFSGLTIGSHPVAD--ATGSSDGENMNFADYMAVVKKITSA-VSIPVSVDVESGYGL 93 (255)
T ss_dssp CCCEECC--EESSHHHHHHHHHTTCSCEEECHHHHHH--HTTCCTTTCSCHHHHHHHHHHHHHH-CSSCEEEECTTCTTC
T ss_pred CCcEEEe--cCcCHHHHHHHHHcCCCEEEEChHHHHH--hCCCCCCCCcCHHHHHHHHHHHHhc-CCCCEEeccCCCcCc
Confidence 3445544 88899999999999999887763 2222 2444332 11 11111 225665533 455
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEecCCC-----C
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVRTGY-----F 323 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR~G~-----~ 323 (540)
.+ .+.++++. ++|+++|.|--|... -|..| -..+.+.+.|++++++. ++|+.|--|++. .
T Consensus 94 ~~---~~~~~~l~-~aGa~gv~iEd~~~~-------~~k~l-~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~ 161 (255)
T 2qiw_A 94 SP---ADLIAQIL-EAGAVGINVEDVVHS-------EGKRV-REAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGAD 161 (255)
T ss_dssp CH---HHHHHHHH-HTTCCEEEECSEEGG-------GTTEE-CCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTT
T ss_pred HH---HHHHHHHH-HcCCcEEEECCCCCC-------CCCcc-cCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCC
Confidence 56 66777776 589999999754311 12223 34556666677776653 688766667642 1
Q ss_pred ---CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe--CCC----CCHHHHHHHHh
Q 009196 324 ---EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN--GDI----YSYLDWNKHKS 394 (540)
Q Consensus 324 ---e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN--GdI----~s~eDa~~~l~ 394 (540)
+..+++++=++.++++|++.|.+++- .+.+.++++.+.+ ++|+..+ ++- .+.++..
T Consensus 162 ~~~~~~~~ai~ra~a~~eAGAd~i~~e~~---------~~~~~~~~i~~~~--~~P~n~~~~~~~~~p~~~~~eL~---- 226 (255)
T 2qiw_A 162 VFEDPMVEAIKRIKLMEQAGARSVYPVGL---------STAEQVERLVDAV--SVPVNITAHPVDGHGAGDLATLA---- 226 (255)
T ss_dssp TSSSHHHHHHHHHHHHHHHTCSEEEECCC---------CSHHHHHHHHTTC--SSCBEEECBTTTBBTTBCHHHHH----
T ss_pred cchHHHHHHHHHHHHHHHcCCcEEEEcCC---------CCHHHHHHHHHhC--CCCEEEEecCCCCCCCCCHHHHH----
Confidence 12467778888899999999999753 3457789999988 5777665 333 4555443
Q ss_pred cCCCcCeeeecHH
Q 009196 395 DCPELASCMIARG 407 (540)
Q Consensus 395 ~~~gaDgVMIGRg 407 (540)
+ -|+.-|..|-.
T Consensus 227 ~-lGv~~v~~~~~ 238 (255)
T 2qiw_A 227 G-LGVRRVTFGPL 238 (255)
T ss_dssp H-TTCCEEECTTH
T ss_pred H-cCCCEEEEHHH
Confidence 3 68999988865
No 256
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=96.23 E-value=0.026 Score=59.21 Aligned_cols=133 Identities=14% Similarity=0.149 Sum_probs=95.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCC
Q 009196 244 FGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGY 322 (540)
Q Consensus 244 ~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~ 322 (540)
+...+...+++.+++.|+.+. +.||..|-|..|.. +++.-.+.|+++++++ +..+.|-.--+|
T Consensus 136 ~~~t~~~~~~e~~~~~a~~~~-~~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~~~~L~vDaN~~w 199 (389)
T 3s5s_A 136 TDITITTGSPERAEEAARRAA-AMGFRALKVKVGGR---------------LAASDPARIEAIHAAAPGASLILDGNGGL 199 (389)
T ss_dssp CCEEECSSCSHHHHHHHHHHH-HHTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCTTCEEEEECTTCS
T ss_pred EEeeecCCCHHHHHHHHHHHH-HcCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 334566778899888887765 35999999976531 1333445667777766 445666666677
Q ss_pred CCChhHHHHHHHHH--HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 323 FEGKNRIDSLIADI--GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 323 ~e~~~~~~~la~~l--eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+ ..++..+++.| ++.++.+| +|.. .+.|++..+++++.+ ++||.+.=.+.+..++.+++.. ..+|
T Consensus 200 ~--~~~A~~~~~~L~~~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~iPIa~dEs~~~~~~~~~~i~~-~a~d 266 (389)
T 3s5s_A 200 T--AGEALALVAHARRLGADVALL-------EQPV-PRDDWDGMKEVTRRA--GVDVAADESAASAEDVLRVAAE-RAAT 266 (389)
T ss_dssp C--HHHHHHHHHHHHHTTCEEEEE-------ECCS-CTTCHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHT-TCCS
T ss_pred C--HHHHHHHHHHHhhCCCCeEEE-------ECCC-CcccHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHc-CCCC
Confidence 3 57888999999 44444433 3443 345899999999988 6999998899999999998886 7899
Q ss_pred eeeec
Q 009196 401 SCMIA 405 (540)
Q Consensus 401 gVMIG 405 (540)
.|++=
T Consensus 267 ~v~~k 271 (389)
T 3s5s_A 267 VVNIK 271 (389)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98863
No 257
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=96.12 E-value=0.032 Score=54.11 Aligned_cols=138 Identities=11% Similarity=0.022 Sum_probs=82.7
Q ss_pred EEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc--ccEEEEecCCC
Q 009196 245 GVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD--KPITIKVRTGY 322 (540)
Q Consensus 245 ~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~--iPVtVKiR~G~ 322 (540)
=+-++ -.|+.+++++ . ++|+|.|.+|..+. .+-+.+.++++++.-. ..+.|-+-+++
T Consensus 64 DlKl~-Dip~t~~~~~---~-~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~lts~ 122 (221)
T 3exr_A 64 DTKCA-DAGGTVAKNN---A-VRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVELYGDW 122 (221)
T ss_dssp EEEEC-SCHHHHHHHH---H-TTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEECCSSC
T ss_pred EEEee-ccHHHHHHHH---H-HcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEEcCCC
Confidence 35565 6688888763 4 67999999995332 1224445555543211 22333333332
Q ss_pred CCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC-cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCe
Q 009196 323 FEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL-ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 323 ~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~-adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDg 401 (540)
+. +-++.+.+.|++.+.+|--...+. .|. .....+..+++..+.+++|...||| +++++..+.. .|||.
T Consensus 123 --~~----~~~~~~~~~~~~~~v~~~a~~~~~-~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~~--aGad~ 192 (221)
T 3exr_A 123 --TY----DQAQQWLDAGISQAIYHQSRDALL-AGETWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFEG--VDVFT 192 (221)
T ss_dssp --CH----HHHHHHHHTTCCEEEEECCHHHHH-HTCCCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGTT--CCCSE
T ss_pred --CH----HHHHHHHcCCHHHHHHHHHHhcCC-CccccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHHH--CCCCE
Confidence 11 223455678999988874322221 221 2234456666654325889999999 6778776554 79999
Q ss_pred eeecHHHHhCCC
Q 009196 402 CMIARGALIKPW 413 (540)
Q Consensus 402 VMIGRgaL~nPw 413 (540)
+.+||++...+.
T Consensus 193 ~VvG~~I~~a~d 204 (221)
T 3exr_A 193 FIAGRGITEAKN 204 (221)
T ss_dssp EEECHHHHTSSS
T ss_pred EEECchhhCCCC
Confidence 999999886554
No 258
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=96.11 E-value=0.0043 Score=60.54 Aligned_cols=69 Identities=10% Similarity=0.065 Sum_probs=52.9
Q ss_pred HHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 334 ADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 334 ~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
..+.+.|+|+|-+|.- ... ..++++.++..++ ++||++.||| +++.+.+++.. .|+++|. |++++..+
T Consensus 133 ~~A~~~Gad~vk~FPa-------~~~~G~~~lk~i~~~~~-~ipvvaiGGI-~~~N~~~~l~~-~Ga~~v~-gSai~~~~ 201 (225)
T 1mxs_A 133 MMGYALGYRRFKLFPA-------EISGGVAAIKAFGGPFG-DIRFCPTGGV-NPANVRNYMAL-PNVMCVG-TTWMLDSS 201 (225)
T ss_dssp HHHHTTTCCEEEETTH-------HHHTHHHHHHHHHTTTT-TCEEEEBSSC-CTTTHHHHHHS-TTBCCEE-ECTTSCHH
T ss_pred HHHHHCCCCEEEEccC-------ccccCHHHHHHHHhhCC-CCeEEEECCC-CHHHHHHHHhc-cCCEEEE-EchhcCch
Confidence 4456789999999651 111 2578999998886 7999999999 77888888874 7999999 87776544
Q ss_pred C
Q 009196 413 W 413 (540)
Q Consensus 413 w 413 (540)
+
T Consensus 202 ~ 202 (225)
T 1mxs_A 202 W 202 (225)
T ss_dssp H
T ss_pred h
Confidence 3
No 259
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=96.09 E-value=0.11 Score=53.54 Aligned_cols=127 Identities=12% Similarity=0.189 Sum_probs=97.7
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
+..++.+.++++.+. +.||..+-+..|- .+++.-.+.++++++++ ++.+.|-.-.+|+ ..
T Consensus 141 ~~~~~~~~~~~~~~~-~~g~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~--~~ 202 (370)
T 2chr_A 141 GDTKRDLDSAVEMIE-RRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQAWD--EQ 202 (370)
T ss_dssp SCHHHHHHHHHHHHH-TTSCCEEEEECSS---------------SCHHHHHHHHHHHHHHTTTTSEEEEECTTCCC--TH
T ss_pred CchhhhHHHHHHHHh-hcccceeeccccc---------------CChHHHHHHHHHHHHhcCCCcEEEecCCCCCC--HH
Confidence 455677788888776 6799998886542 23455556678888877 4567777777784 57
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++..+++.|++.++.+| +|.. .+-|++..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|++=
T Consensus 203 ~A~~~~~~l~~~~~~~i-------EeP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~-~a~d~i~~d 269 (370)
T 2chr_A 203 VASVYIPELEALGVELI-------EQPV-GRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARD-RSVDVFSLK 269 (370)
T ss_dssp HHHHHHHHHHTTTCCEE-------ECCS-CSSCHHHHHHHHHHC--SSEEEESSSCCSHHHHHHHHTT-TCCSEECCC
T ss_pred HHHHHHHHHHhcCCcee-------cCCC-ChhhhhhhhHHhhhc--cCCccCCccCCCHHHHHHHHHc-CCCcEEEeC
Confidence 89999999999998876 3443 345899999999998 7999999899999999998886 778888753
No 260
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=96.04 E-value=0.062 Score=54.44 Aligned_cols=156 Identities=15% Similarity=0.013 Sum_probs=94.3
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCcccccc---CCchHHHHHHHHhcccccccEEEEec--CCCCCChhHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLL---TKPMRMKGIIEATSGTVDKPITIKVR--TGYFEGKNRIDSLIA 334 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl---~~p~~l~eIv~av~~~v~iPVtVKiR--~G~~e~~~~~~~la~ 334 (540)
++.+. +.|+|.||+= . .+|..+. .+.+.+.+-|++|+++++ +..+|+- ++.-.+.+.....+.
T Consensus 106 a~~Av-~~GAdEIDmV--------i--nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~A~~ 173 (297)
T 4eiv_A 106 AVGAL-KDGADEIECL--------I--DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISRAAV 173 (297)
T ss_dssp HHHHH-HTTCSEEEEE--------C--CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEee--------e--eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHHHHH
Confidence 33344 4599999972 2 2344344 467888888888888774 4456654 444333333566777
Q ss_pred HHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHc----------------------CCCceEEEe-CCCCCHHHHHH
Q 009196 335 DIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKA----------------------SDDLQVLGN-GDIYSYLDWNK 391 (540)
Q Consensus 335 ~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~----------------------~~~IPVIgN-GdI~s~eDa~~ 391 (540)
...++|+|+|--+. +.-.+.|..+.+..+++.+ +.++-|=+. |||+|++++.+
T Consensus 174 ia~~AGADFVKTST----Gf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~A~~ 249 (297)
T 4eiv_A 174 AALEGGADFLQTSS----GLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAETADF 249 (297)
T ss_dssp HHHHHTCSEEECCC----SSSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHHHHH
T ss_pred HHHHhCCCEEEcCC----CCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHHHHH
Confidence 78899999996432 2223446666665555544 346889999 99999999999
Q ss_pred HHhcCCCcCeeeecHHHHhCCCchHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCc
Q 009196 392 HKSDCPELASCMIARGALIKPWIFTEIKEQRHWDITSGERLNIMKDFARFGLEHWGSD 449 (540)
Q Consensus 392 ~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~~~~s~~erl~il~~~~~~~le~~g~d 449 (540)
+++. + .- |++.|+=... .|.. -|+ .|+++... .++.|-++
T Consensus 250 ~i~~--------~-~e-lG~~wl~~~~--fRiG-aSs----~ll~el~~-~~~~~~~~ 289 (297)
T 4eiv_A 250 LMQM--------I-FE-NGPRSIVRDK--FRVG-GGF----NLLKELRD-CYESWDSV 289 (297)
T ss_dssp HHHH--------H-HH-HCGGGCSTTT--EEEE-ECH----HHHHHHHH-HHHTSCCC
T ss_pred HHHH--------H-HH-hCccccCCCc--eEec-ccH----HHHHHHHH-HHhhhccc
Confidence 8862 2 22 5555552221 1111 133 56666544 66777653
No 261
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.03 E-value=0.01 Score=61.95 Aligned_cols=71 Identities=8% Similarity=-0.064 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
....+.++++.++|++.|+||.-. ++. ..-|+.|+.+++..+ ++|||+ |+|.|++++..+.+ .|||+|.||
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~---G~~-~~~~e~I~~ir~~~~-~~~Vi~-G~V~T~e~A~~a~~--aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAH---AHA-KYVGKTLKSLRQLLG-SRCIMA-GNVATYAGADYLAS--CGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSC---CSS-HHHHHHHHHHHHHHT-TCEEEE-EEECSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC---CCc-HhHHHHHHHHHHhcC-CCeEEE-cCcCCHHHHHHHHH--cCCCEEEEc
Confidence 456788999999999999996421 121 123789999999876 689987 67999999999776 799999985
No 262
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=95.99 E-value=0.025 Score=54.04 Aligned_cols=73 Identities=11% Similarity=0.068 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.....-++.+.+...|++-+-+ |.. -..|+++++.+ ++|||+.|.|.+.+|+.+++. .||++|..+.
T Consensus 114 ~al~~~~~~i~~~~PD~iEiLP--------Gi~-p~iI~~i~~~~--~~PiIaGGlI~~~edv~~al~--aGA~aVsTs~ 180 (192)
T 3kts_A 114 SAYNKGVALIQKVQPDCIELLP--------GII-PEQVQKMTQKL--HIPVIAGGLIETSEQVNQVIA--SGAIAVTTSN 180 (192)
T ss_dssp HHHHHHHHHHHHHCCSEEEEEC--------TTC-HHHHHHHHHHH--CCCEEEESSCCSHHHHHHHHT--TTEEEEEECC
T ss_pred chHHHHHHHHhhcCCCEEEECC--------chh-HHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHH--cCCeEEEeCC
Confidence 3445566777788888886642 222 26899999998 799999999999999999997 7999999999
Q ss_pred HHHhCC
Q 009196 407 GALIKP 412 (540)
Q Consensus 407 gaL~nP 412 (540)
..|++-
T Consensus 181 ~~LW~~ 186 (192)
T 3kts_A 181 KHLWEG 186 (192)
T ss_dssp GGGGTT
T ss_pred HHHhCc
Confidence 988764
No 263
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=95.98 E-value=0.078 Score=54.00 Aligned_cols=129 Identities=16% Similarity=0.034 Sum_probs=87.7
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. +.|-+.. -..+.-.++++.+.+.+ .+||.+-+ | . +..++
T Consensus 31 D~~~l~~lv~~li-~~Gv~Gl~v~G--------tTGE~~~--Ls~eEr~~v~~~~v~~~~grvpViaGv--g-~-~t~~a 95 (316)
T 3e96_A 31 DWHHYKETVDRIV-DNGIDVIVPCG--------NTSEFYA--LSLEEAKEEVRRTVEYVHGRALVVAGI--G-Y-ATSTA 95 (316)
T ss_dssp CHHHHHHHHHHHH-TTTCCEECTTS--------GGGTGGG--SCHHHHHHHHHHHHHHHTTSSEEEEEE--C-S-SHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCc--------cccCccc--CCHHHHHHHHHHHHHHhCCCCcEEEEe--C-c-CHHHH
Confidence 5678888888877 67999997762 1122222 23333445566655554 57898866 4 3 67889
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-CCCCCHHHHHHHHhcCCCcCee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-GDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-GdI~s~eDa~~~l~~~~gaDgV 402 (540)
+++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++||| .| |--.+++.+.++. +++++-||
T Consensus 96 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~g~~l~~~~~~~La-~~pnIvgi 166 (316)
T 3e96_A 96 IELGNAAKAAGADAVMIHM----PIHPYVTAGGVYAYFRDIIEAL--DFPSLVYFKDPEISDRVLVDLA-PLQNLVGV 166 (316)
T ss_dssp HHHHHHHHHHTCSEEEECC----CCCSCCCHHHHHHHHHHHHHHH--TSCEEEEECCTTSCTHHHHHHT-TCTTEEEE
T ss_pred HHHHHHHHhcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHH-cCCCEEEE
Confidence 9999999999999998852 2233322 267888999988 58876 56 7667888888855 34655554
No 264
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.98 E-value=0.096 Score=52.63 Aligned_cols=159 Identities=14% Similarity=0.173 Sum_probs=99.1
Q ss_pred CcEEEccCCCCCCHHHHHHHHHhCCCEEEeccceechhccCChhh----hh-------hhhcccCCCeEEEEec-C--Cc
Q 009196 187 EKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASE----WA-------LLRRHSSEDLFGVQIC-G--AY 252 (540)
Q Consensus 187 nrliLAPM~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g~~~e----~~-------ll~~~~~e~p~~vQL~-G--~~ 252 (540)
+..+..| +.-|.++-+++.+.|++++.+.-... ....|...+ +. .+.+.....|+++=+= | .+
T Consensus 28 g~~i~m~--tayDa~sA~l~e~aG~d~ilvGdSl~-~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s 104 (275)
T 3vav_A 28 GEKIAML--TCYDASFAALLDRANVDVQLIGDSLG-NVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGT 104 (275)
T ss_dssp TCCEEEE--ECCSHHHHHHHHHTTCSEEEECTTHH-HHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSS
T ss_pred CCcEEEE--eCcCHHHHHHHHHcCCCEEEECcHHH-HHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCC
Confidence 3444444 77899999999999999886653222 122333322 11 1223333456776654 3 47
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC---------CCC
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT---------GYF 323 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~---------G~~ 323 (540)
+++..+.|.++. ++|+++|.|--| ....+.|+++++ .++||.--+.+ |+.
T Consensus 105 ~~~a~~~a~rl~-kaGa~aVklEdg-------------------~~~~~~i~~l~~-~GIpv~gHlgltPq~~~~~gg~~ 163 (275)
T 3vav_A 105 PADAFASAVKLM-RAGAQMVKFEGG-------------------EWLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFK 163 (275)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEECC-------------------GGGHHHHHHHHH-TTCCEEEEEESCGGGHHHHC---
T ss_pred HHHHHHHHHHHH-HcCCCEEEECCc-------------------hhHHHHHHHHHH-CCCCEEEecCCCceEEeccCCeE
Confidence 888888887776 469999999533 123445555544 36776532211 111
Q ss_pred ------CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC
Q 009196 324 ------EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG 381 (540)
Q Consensus 324 ------e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG 381 (540)
+..+.+++=++.++++|+++|.+-+- .. +.+++|.+.+ +||+||-|
T Consensus 164 vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~v---------p~-~~a~~It~~l--~iP~igIG 215 (275)
T 3vav_A 164 VQGKTEAGAAQLLRDARAVEEAGAQLIVLEAV---------PT-LVAAEVTREL--SIPTIGIG 215 (275)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESC---------CH-HHHHHHHHHC--SSCEEEES
T ss_pred EEcCCHHHHHHHHHHHHHHHHcCCCEEEecCC---------CH-HHHHHHHHhC--CCCEEEEc
Confidence 11246777778889999999998542 22 3688999998 79999877
No 265
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=95.97 E-value=0.05 Score=58.16 Aligned_cols=124 Identities=11% Similarity=0.134 Sum_probs=96.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+|+.+++.|+.+.++.||..|-|..|-. +++.-.+.|+++|+++ ++++.|-.-.+|+ ..++
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~--~~~A 254 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWT--PQTS 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSC--HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCC--HHHH
Confidence 57899988887765335999999875421 3445566778888877 6778887777884 5788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
+.+++.|++. +.+| +|.. .+++..+++++.+ ++||.+.-.+.++.++.++++. ..+|.|++=
T Consensus 255 i~~~~~L~~~-l~~i-------EeP~---~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~a~div~~d 316 (445)
T 3vdg_A 255 VKVAAGLEGV-LEYL-------EDPT---PGLDGMAEVAAQA--PMPLATNMCVVAFDQLPAAVAK-NSVQVVLSD 316 (445)
T ss_dssp HHHHHHTTTT-CSEE-------ECCS---SSHHHHHHHHHHC--SSCEEESSSCCSGGGHHHHHHH-TCCSEEEEC
T ss_pred HHHHHHHhhH-HHee-------eCCC---CCHHHHHHHHhcC--CCCEEcCCcCCCHHHHHHHHHc-CCCCEEeeC
Confidence 9999999887 7666 3433 3788899999998 6999999999999999999886 779988874
No 266
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=95.97 E-value=0.17 Score=51.05 Aligned_cols=130 Identities=12% Similarity=0.050 Sum_probs=87.3
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+.. -..+.-.++++.+++.+ .+||.+-+-. .+..++
T Consensus 31 D~~~l~~lv~~li-~~Gv~gl~v~Gt--------TGE~~~--Ls~eEr~~v~~~~~~~~~grvpViaGvg~---~~t~~a 96 (301)
T 1xky_A 31 DFAKTTKLVNYLI-DNGTTAIVVGGT--------TGESPT--LTSEEKVALYRHVVSVVDKRVPVIAGTGS---NNTHAS 96 (301)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESST--------TTTGGG--SCHHHHHHHHHHHHHHHTTSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccChhh--CCHHHHHHHHHHHHHHhCCCceEEeCCCC---CCHHHH
Confidence 5678888888877 579999988631 122222 23344445566655554 5799885542 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++|||. | |--.+++.+.++.+ .+++-
T Consensus 97 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pnIv 169 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA----PYYNKPSQEGMYQHFKAIAEST--PLPVMLYNVPGRSIVQISVDTVVRLSE-IENIV 169 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHTC--SSCEEEEECHHHHSSCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHhcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCCCCCHHHHHHHHc-CCCEE
Confidence 9999999999999998853 2343332 256788888887 689764 5 54568888888654 46655
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 170 gi 171 (301)
T 1xky_A 170 AI 171 (301)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 267
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=95.97 E-value=0.033 Score=58.47 Aligned_cols=139 Identities=14% Similarity=0.065 Sum_probs=97.2
Q ss_pred EEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCC
Q 009196 246 VQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFE 324 (540)
Q Consensus 246 vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e 324 (540)
..+...+++.+++.|+.+. +.||..|-|..|.+.... .-...++.-.+.|+++|+++ +..+.|-.--+|+
T Consensus 159 ~t~~~~~~e~~~~~a~~~~-~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~w~- 229 (393)
T 3u9i_A 159 VTITTGSVTAAARAAQAIV-ARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAPTARLILDGNCGYT- 229 (393)
T ss_dssp EEEC---CHHHHHHHHHHH-TTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSCCC-
T ss_pred EEecCCCHHHHHHHHHHHH-HcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCCCCeEEEEccCCCC-
Confidence 4455678888888887776 569999999887543110 00112455666788888877 4556666666773
Q ss_pred ChhHHHHHHHHH--HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 325 GKNRIDSLIADI--GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 325 ~~~~~~~la~~l--eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
..++.++++.| ++.++.+| +|.. .+.+++..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|
T Consensus 230 -~~~A~~~~~~L~~~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~d~i 297 (393)
T 3u9i_A 230 -APDALRLLDMLGVHGIVPALF-------EQPV-AKDDEEGLRRLTATR--RVPVAADESVASATDAARLARN-AAVDVL 297 (393)
T ss_dssp -HHHHHHHHHTTTTTTCCCSEE-------ECCS-CTTCTTHHHHHHHTC--SSCEEESTTCCSHHHHHHHHHT-TCCSEE
T ss_pred -HHHHHHHHHHHhhCCCCeEEE-------ECCC-CCCcHHHHHHHHhhC--CCcEEeCCcCCCHHHHHHHHHc-CCCCEE
Confidence 57888999999 77777776 3433 335788889999988 6999999999999999998886 778988
Q ss_pred eec
Q 009196 403 MIA 405 (540)
Q Consensus 403 MIG 405 (540)
++=
T Consensus 298 ~~k 300 (393)
T 3u9i_A 298 NIK 300 (393)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 268
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=95.96 E-value=0.14 Score=52.23 Aligned_cols=132 Identities=19% Similarity=0.113 Sum_probs=87.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. +.|-+..| ..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 43 D~~~l~~lv~~li-~~Gv~Gi~v~G--------tTGE~~~L--s~~Er~~v~~~~v~~~~grvpViaGvg~---~~t~~a 108 (315)
T 3na8_A 43 DLPALGRSIERLI-DGGVHAIAPLG--------STGEGAYL--SDPEWDEVVDFTLKTVAHRVPTIVSVSD---LTTAKT 108 (315)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEECSS--------GGGTGGGS--CHHHHHHHHHHHHHHHTTSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc--------cccChhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC---CCHHHH
Confidence 5678888888877 57999998863 11222222 3333445566665544 5799985432 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++||+ .| |--.+++.+.++..+++++-
T Consensus 109 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIv 182 (315)
T 3na8_A 109 VRRAQFAESLGAEAVMVLP----ISYWKLNEAEVFQHYRAVGEAI--GVPVMLYNNPGTSGIDMSVELILRIVREVDNVT 182 (315)
T ss_dssp HHHHHHHHHTTCSEEEECC----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhC--CCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEE
Confidence 9999999999999998853 2333332 267888899988 58876 45 55567888887634446665
Q ss_pred eee
Q 009196 401 SCM 403 (540)
Q Consensus 401 gVM 403 (540)
||=
T Consensus 183 giK 185 (315)
T 3na8_A 183 MVK 185 (315)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 269
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=95.93 E-value=0.04 Score=58.88 Aligned_cols=124 Identities=9% Similarity=0.118 Sum_probs=95.9
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+|+.+++.|+.+.++.||..|-|..|-. +++.-.+.|+++|+++ ++++.|-.--+|+ ..++
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~--~~~A 252 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWT--VETS 252 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBC--HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCC--HHHH
Confidence 57899988887765335999999975431 3445556788888877 6678887777884 5788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
..+++.|++. +.+| +|.. .+++..+++++.+ ++||.+.-.+.+..++.++++. ..+|.|++=
T Consensus 253 i~~~~~L~~~-l~~i-------EeP~---~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~div~~d 314 (445)
T 3va8_A 253 KWVAKELEGI-VEYL-------EDPA---GEIEGMAAVAKEA--SMPLATNMAVVAFDHLPPSILQ-DAVQVILSD 314 (445)
T ss_dssp HHHHHHTTTT-CSEE-------ESCB---SHHHHHHHHHTTC--SSCEEESSSCCSGGGHHHHHHT-TCCSEEEEC
T ss_pred HHHHHHHhhh-cCeE-------eecC---cCHHHHHHHHHcC--CCCEEeCCccCCHHHHHHHHHc-CCCCEEEec
Confidence 9999999887 7666 3332 3788889999988 6999999999999999999986 779988873
No 270
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=95.92 E-value=0.028 Score=54.33 Aligned_cols=127 Identities=12% Similarity=0.082 Sum_probs=76.1
Q ss_pred hCCCCEEEecCC-CCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEE
Q 009196 266 QCTVDFIDINMG-CPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAV 344 (540)
Q Consensus 266 ~aG~D~IDIN~G-CP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaI 344 (540)
++|+|+|=|... ...+ ...+.+.++..++. ++.+.+=+.. . .+ ..++.+.|.+.|
T Consensus 80 ~~Gad~Vll~~ser~l~--------------~~e~~~~~~~a~~~-Gl~~iv~v~~----~-~e----~~~~~~~~~~~i 135 (219)
T 2h6r_A 80 DCGCKGTLINHSEKRML--------------LADIEAVINKCKNL-GLETIVCTNN----I-NT----SKAVAALSPDCI 135 (219)
T ss_dssp HHTCCEEEESBTTBCCB--------------HHHHHHHHHHHHHH-TCEEEEEESS----S-HH----HHHHTTTCCSEE
T ss_pred HcCCCEEEECCccccCC--------------HHHHHHHHHHHHHC-CCeEEEEeCC----c-hH----HHHHHhCCCCEE
Confidence 569999998321 0111 12245566655443 5544443332 1 11 245566789999
Q ss_pred EEecccccC------ccCCCcCHH-HHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHH
Q 009196 345 TVHGRTRQQ------RYSKLADWD-YIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTE 417 (540)
Q Consensus 345 tVHgRtr~q------~y~g~adw~-~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~e 417 (540)
.++.|...+ ..+. .+.. .+..+++.. .++||++-|+|.+++++..+.. .|+|||.||++++.-+.+...
T Consensus 136 ~~~~~~~iGtG~~~~t~~~-~~~~~~~~~ir~~~-~~~~ii~ggGI~~~~~~~~~~~--~gaDgvlVGsAi~~~~d~~~~ 211 (219)
T 2h6r_A 136 AVEPPELIGTGIPVSKANP-EVVEGTVRAVKEIN-KDVKVLCGAGISKGEDVKAALD--LGAEGVLLASGVVKAKNVEEA 211 (219)
T ss_dssp EECCCC---------------CSHHHHHHHHHHC-TTCEEEECSSCCSHHHHHHHHT--TTCCCEEESHHHHTCSSHHHH
T ss_pred EEEeccccccCCCCccCCH-HHHHHHHHHHHhcc-CCCeEEEEeCcCcHHHHHHHhh--CCCCEEEEcHHHhCcccHHHH
Confidence 999887421 1111 1133 334444443 3699999999999999988654 799999999888877666555
Q ss_pred HHh
Q 009196 418 IKE 420 (540)
Q Consensus 418 ik~ 420 (540)
+++
T Consensus 212 ~~~ 214 (219)
T 2h6r_A 212 IRE 214 (219)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 271
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=95.92 E-value=0.13 Score=51.73 Aligned_cols=131 Identities=12% Similarity=0.071 Sum_probs=87.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 19 D~~~l~~lv~~li-~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~---~~t~~a 84 (292)
T 2vc6_A 19 DEVALHDLVEWQI-EEGSFGLVPCG----------TTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS---NSTAEA 84 (292)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEETTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC---ccHHHH
Confidence 5677888888877 57999998762 122222223444445666665554 5799885543 246789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE------eCCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG------NGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg------NGdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -..+++.|++.+ ++|||. .|--.+++.+.++.++++++-
T Consensus 85 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIv 158 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS----PYYNKPTQEGIYQHFKAIDAAS--TIPIIVYNIPGRSAIEIHVETLARIFEDCPNVK 158 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEeCccccCcCCCHHHHHHHHhhCCCEE
Confidence 9999999999999998853 2343332 256778899888 699886 465568888888654135555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 159 gi 160 (292)
T 2vc6_A 159 GV 160 (292)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 272
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=95.91 E-value=0.056 Score=53.52 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=71.9
Q ss_pred cccEEEEec-----CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCC
Q 009196 311 DKPITIKVR-----TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYS 385 (540)
Q Consensus 311 ~iPVtVKiR-----~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s 385 (540)
+.+|..-+. .||-.. .+..++|+.++++|+++|.|- |-...+.| ..+++..+++.+ ++||+.-+.|.+
T Consensus 45 ~~~~IaE~k~aSPskg~i~~-~~p~~~A~~~~~~GA~~isvl--t~~~~f~G--~~~~l~~i~~~v--~lPvl~kdfI~d 117 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLIRE-VDPVEAALAYARGGARAVSVL--TEPHRFGG--SLLDLKRVREAV--DLPLLRKDFVVD 117 (254)
T ss_dssp SCEEEEEECSCCTTTCCCCS-CCHHHHHHHHHHTTCSEEEEE--CCCSSSCC--CHHHHHHHHHHC--CSCEEEESCCCS
T ss_pred CCcEEeeecCCCcCCCcCCC-CCHHHHHHHHHHcCCCEEEEe--cchhhhcc--CHHHHHHHHHhc--CCCEEECCcCCC
Confidence 455555432 144333 567899999999999999883 32333333 467889999988 799999999999
Q ss_pred HHHHHHHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 386 YLDWNKHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 386 ~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
..++.+++. .|||+|.++-.++. ..+.++
T Consensus 118 ~~qi~~a~~--~GAD~VlL~~~~l~--~~l~~l 146 (254)
T 1vc4_A 118 PFMLEEARA--FGASAALLIVALLG--ELTGAY 146 (254)
T ss_dssp HHHHHHHHH--TTCSEEEEEHHHHG--GGHHHH
T ss_pred HHHHHHHHH--cCCCEEEECccchH--HHHHHH
Confidence 999988776 79999999999886 444444
No 273
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=95.89 E-value=0.18 Score=51.42 Aligned_cols=132 Identities=15% Similarity=0.082 Sum_probs=88.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+.. .+..++
T Consensus 41 D~~~l~~li~~li-~~Gv~Gl~v~Gt--------TGE~~~L--s~~Er~~v~~~~v~~~~grvpViaGvg~---~st~~a 106 (315)
T 3si9_A 41 DEKAFCNFVEWQI-TQGINGVSPVGT--------TGESPTL--THEEHKRIIELCVEQVAKRVPVVAGAGS---NSTSEA 106 (315)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEECSST--------TTTGGGS--CHHHHHHHHHHHHHHHTTSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCcc--------ccCcccc--CHHHHHHHHHHHHHHhCCCCcEEEeCCC---CCHHHH
Confidence 5688888888887 579999977631 1222222 3333345555555544 5799885432 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++||| .| |--.+++.+.++.++++++-
T Consensus 107 i~la~~A~~~Gadavlv~~----P~y~~~~~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIv 180 (315)
T 3si9_A 107 VELAKHAEKAGADAVLVVT----PYYNRPNQRGLYTHFSSIAKAI--SIPIIIYNIPSRSVIDMAVETMRDLCRDFKNII 180 (315)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHcC--CCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEE
Confidence 9999999999999998853 2333332 267788899888 68877 44 65668888888655246665
Q ss_pred eee
Q 009196 401 SCM 403 (540)
Q Consensus 401 gVM 403 (540)
||=
T Consensus 181 giK 183 (315)
T 3si9_A 181 GVK 183 (315)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 274
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=95.88 E-value=0.023 Score=55.78 Aligned_cols=147 Identities=10% Similarity=0.040 Sum_probs=92.7
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCc--c---------cccCCccccccCCchHHHHHHH-------
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPID--I---------VVNKGAGSCLLTKPMRMKGIIE------- 304 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~--~---------v~~~G~GsaLl~~p~~l~eIv~------- 304 (540)
+++.=|.+.+++.....++.+. +.|++.|||-+--|.. . ...-|+|. ++ +++.+...++
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~-~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGT-Vl-t~~~a~~Ai~AGA~fIv 111 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLA-ENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGT-IL-NGEQALAAKEAGATFVV 111 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHH-HTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEEC-CC-SHHHHHHHHHHTCSEEE
T ss_pred CEEEEEEcCCHHHHHHHHHHHH-HCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECC-cC-CHHHHHHHHHcCCCEEE
Confidence 5666677888888888888877 6799999986543321 0 01124454 22 3444444333
Q ss_pred ----------HhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 305 ----------ATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 305 ----------av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
..++. ++|+..-+. +..+ +..+.++|+|.|-++.-. .. ...++++.++..++ +
T Consensus 112 sP~~~~~vi~~~~~~-gi~~ipGv~--------TptE-i~~A~~~Gad~vK~FPa~---~~---gG~~~lkal~~p~p-~ 174 (232)
T 4e38_A 112 SPGFNPNTVRACQEI-GIDIVPGVN--------NPST-VEAALEMGLTTLKFFPAE---AS---GGISMVKSLVGPYG-D 174 (232)
T ss_dssp CSSCCHHHHHHHHHH-TCEEECEEC--------SHHH-HHHHHHTTCCEEEECSTT---TT---THHHHHHHHHTTCT-T
T ss_pred eCCCCHHHHHHHHHc-CCCEEcCCC--------CHHH-HHHHHHcCCCEEEECcCc---cc---cCHHHHHHHHHHhc-C
Confidence 32221 344433221 1222 334568999999886532 11 13589999998887 7
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
+|++..||| +++.+.+++. .|+.++.+|. .|.+|.
T Consensus 175 ip~~ptGGI-~~~n~~~~l~--aGa~~~vgGs-~l~~~~ 209 (232)
T 4e38_A 175 IRLMPTGGI-TPSNIDNYLA--IPQVLACGGT-WMVDKK 209 (232)
T ss_dssp CEEEEBSSC-CTTTHHHHHT--STTBCCEEEC-GGGCHH
T ss_pred CCeeeEcCC-CHHHHHHHHH--CCCeEEEECc-hhcChH
Confidence 999999999 5899999997 6888887774 344444
No 275
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=95.85 E-value=0.029 Score=57.56 Aligned_cols=94 Identities=10% Similarity=0.058 Sum_probs=66.5
Q ss_pred hHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcC--CcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 297 MRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWG--ASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 297 ~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaG--vdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
+...+.++.+++ .+.|+++-+ |+. .+..+.++.+.+.| +++|.++.. +. .....|+.|+.+++.++ .
T Consensus 81 ~~~~~~i~~~~~-~g~~v~v~~--g~~---~~~~~~a~~~~~~g~~~~~i~i~~~---~G-~~~~~~~~i~~lr~~~~-~ 149 (336)
T 1ypf_A 81 EKRISFIRDMQS-RGLIASISV--GVK---EDEYEFVQQLAAEHLTPEYITIDIA---HG-HSNAVINMIQHIKKHLP-E 149 (336)
T ss_dssp GGHHHHHHHHHH-TTCCCEEEE--CCS---HHHHHHHHHHHHTTCCCSEEEEECS---SC-CSHHHHHHHHHHHHHCT-T
T ss_pred HHHHHHHHHHHh-cCCeEEEeC--CCC---HHHHHHHHHHHhcCCCCCEEEEECC---CC-CcHHHHHHHHHHHHhCC-C
Confidence 345556666553 266888864 542 33456788899999 999988642 12 12346899999999984 3
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+||+ .|.|.+++++..+.+ .|||+|.+
T Consensus 150 ~~vi-~G~v~s~e~A~~a~~--aGad~Ivv 176 (336)
T 1ypf_A 150 SFVI-AGNVGTPEAVRELEN--AGADATKV 176 (336)
T ss_dssp SEEE-EEEECSHHHHHHHHH--HTCSEEEE
T ss_pred CEEE-ECCcCCHHHHHHHHH--cCCCEEEE
Confidence 4554 577999999999776 79999999
No 276
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.85 E-value=0.33 Score=49.36 Aligned_cols=195 Identities=11% Similarity=0.029 Sum_probs=105.3
Q ss_pred CCcEEEccCCCCCCH-HHHHHHHHhCCCEEEeccceechh-ccCChhhhhhhhcccCCCeEEEEecCC-cHHHHHHHHHH
Q 009196 186 REKLYLAPLTTVGNL-PFRRVCKVLGADVTCGEMAMCTNL-LQGQASEWALLRRHSSEDLFGVQICGA-YPDTLARTVEL 262 (540)
Q Consensus 186 knrliLAPM~~vtdl-pfR~l~~~~Gadl~~TEmi~a~~l-~~g~~~e~~ll~~~~~e~p~~vQL~G~-~p~~~a~AA~~ 262 (540)
+.++++|= ++.++ -...+....|..+.+-+.- .++ ...+..-+..++... +.++++=+--. -|.....+++.
T Consensus 24 ~~~LiVAL--D~~~~~eal~l~~~l~~~v~~vKVG--~~lf~~~G~~~V~~Lk~~~-g~~IflDlKl~DIpnTv~~av~~ 98 (303)
T 3ru6_A 24 AMKLCVAL--DLSTKEECLQLAKELKNLDIWLKVG--LRAYLRDGFKFIEELKKVD-DFKIFLDLKFHDIPNTMADACEE 98 (303)
T ss_dssp CCEEEEEC--CCSSHHHHHHHHHHTTTSSCEEEEC--HHHHHHHTHHHHHHHHHHC-CCEEEEEEEECSCHHHHHHHHHH
T ss_pred CCCEEEEe--CCCCHHHHHHHHHHhCCCccEEEeC--HHHHHHhCHHHHHHHHHhh-CCCEEEEeeeccCchhHHHHHHH
Confidence 45777773 44443 3456666666433222211 122 112233333333221 44554444333 36667777777
Q ss_pred HHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccccc----EEEEecCCCC-------CC-hhHHH
Q 009196 263 IDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKP----ITIKVRTGYF-------EG-KNRID 330 (540)
Q Consensus 263 ~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iP----VtVKiR~G~~-------e~-~~~~~ 330 (540)
+. ++|+|.|.+|. +|+ ++-+...+++.++.-..| |++.+.++.. .+ .+.+.
T Consensus 99 ~a-~lGaD~vTVHa-----------~~G-----~~~m~aa~e~a~~~~~~~~llaVtvLTS~s~~~l~~l~~~~~~e~V~ 161 (303)
T 3ru6_A 99 VS-KLGVDMINIHA-----------SAG-----KIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVI 161 (303)
T ss_dssp HH-TTTCSEEEEEG-----------GGC-----HHHHHHHHHHHTTSSSCCEEEEECSCTTCCHHHHHHHHSSCHHHHHH
T ss_pred HH-hcCCCEEEEec-----------cCC-----HHHHHHHHHHHHhcCCCceEEEEEEecCCCHHHHHHHHcCCHHHHHH
Confidence 76 68999999984 222 333444555554322222 2233322100 00 12345
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHH----------HHHHHHhcCCCcC
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYL----------DWNKHKSDCPELA 400 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~e----------Da~~~l~~~~gaD 400 (540)
.+++...++|++++..++ .. +..+++.++ +-.++..+||.-.. ...+++. .|+|
T Consensus 162 ~lA~~a~~~G~dGvV~s~----------~E---~~~IR~~~~-~~fl~VTPGIr~qG~~~~DQ~Rv~t~~~a~~--aGAd 225 (303)
T 3ru6_A 162 NFSKISYENGLDGMVCSV----------FE---SKKIKEHTS-SNFLTLTPGIRPFGETNDDQKRVANLAMARE--NLSD 225 (303)
T ss_dssp HHHHHHHHTTCSEEECCT----------TT---HHHHHHHSC-TTSEEEECCCCTTC--------CCSHHHHHH--TTCS
T ss_pred HHHHHHHHcCCCEEEECH----------HH---HHHHHHhCC-CccEEECCCcCcccCCcccccccCCHHHHHH--cCCC
Confidence 678888899999987632 11 567788775 34577788887210 2334344 7999
Q ss_pred eeeecHHHHhCCCchHHH
Q 009196 401 SCMIARGALIKPWIFTEI 418 (540)
Q Consensus 401 gVMIGRgaL~nPwif~ei 418 (540)
.+.+||+.+..+.....+
T Consensus 226 ~iVvGr~I~~a~dp~~a~ 243 (303)
T 3ru6_A 226 YIVVGRPIYKNENPRAVC 243 (303)
T ss_dssp EEEECHHHHTSSCHHHHH
T ss_pred EEEEChHHhCCCCHHHHH
Confidence 999999999876654433
No 277
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=95.84 E-value=0.21 Score=50.15 Aligned_cols=131 Identities=15% Similarity=0.045 Sum_probs=86.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+.. -..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 19 D~~~l~~lv~~li-~~Gv~gl~~~Gt--------tGE~~~--Ls~~Er~~v~~~~~~~~~gr~pviaGvg~---~~t~~a 84 (289)
T 2yxg_A 19 DFDGLEENINFLI-ENGVSGIVAVGT--------TGESPT--LSHEEHKKVIEKVVDVVNGRVQVIAGAGS---NCTEEA 84 (289)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESST--------TTTGGG--SCHHHHHHHHHHHHHHHTTSSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECcc--------ccChhh--CCHHHHHHHHHHHHHHhCCCCcEEEeCCC---CCHHHH
Confidence 6677888888877 579999988631 122222 23334445566555544 4788885532 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++.+.|++++ ++|||. | |--.+++.+.++..+++++-
T Consensus 85 i~la~~a~~~Gadavlv~~----P~y~~~s~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~~~pniv 158 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSIT----PYYNKPTQEGLRKHFGKVAESI--NLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNIS 158 (289)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHHHhCCCEE
Confidence 9999999999999998853 2343332 256778888888 688764 5 55568888888651335554
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 159 gi 160 (289)
T 2yxg_A 159 AV 160 (289)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 278
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=95.83 E-value=0.035 Score=58.10 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=95.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
..++.+++.++.+. +.||..+-|..|- .+++.-.+.|+++++++ ++.+.|-.-.+| +..+
T Consensus 163 ~~~~~~~~~~~~~~-~~G~~~~Kikvg~---------------~~~~~d~~~v~avR~~~G~~~~l~vDaN~~~--~~~~ 224 (388)
T 4h83_A 163 EPLGSIADEMHNYQ-ELGLAGVKFKVGG---------------LSAAEDAARITAAREAAGDDFIICIDANQGY--KPAV 224 (388)
T ss_dssp CTTCSHHHHHHHHH-HHTBSEEEEECSS---------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTCB--CHHH
T ss_pred CCHHHHHHHHHHHH-HcCCceEeecCCC---------------CCHHHHHHHHHHHHHhcCCCeEEEEecCcCC--CHHH
Confidence 34567777777766 4699999987532 13344456678888877 567777777778 4578
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.++++.|++.++.+| +|.....-+++..+++++.+ ++||.+.=.+++..++.++++. ..+|.|++
T Consensus 225 A~~~~~~l~~~~~~~i-------EeP~~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~a~d~i~~ 290 (388)
T 4h83_A 225 AVDLSRRIADLNIRWF-------EEPVEWHNDKRSMRDVRYQG--SVPVCAGQTEFSASGCRDLMET-GAIDVCNF 290 (388)
T ss_dssp HHHHHHHTTTSCCCCE-------ESCBCSTTHHHHHHHHHHHS--SSCEEECTTCSSHHHHHHHHHH-TCCSEECC
T ss_pred HHHHHHHhhhcCccee-------ecCcccccchHHHHHHHhhc--CCCccCCccccChHhHHHHHHc-CCCCeEee
Confidence 9999999999998876 44443334678889999988 7999999999999999999886 77888875
No 279
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=95.80 E-value=0.17 Score=51.08 Aligned_cols=130 Identities=11% Similarity=0.028 Sum_probs=86.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+++.+ .+||.+-+.. .+..++
T Consensus 19 D~~~l~~lv~~li-~~Gv~gi~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~a 84 (297)
T 2rfg_A 19 DEKALAGLVDWQI-KHGAHGLVPVG----------TTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS---NNPVEA 84 (297)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC---CCHHHH
Confidence 5677888888877 57999998863 122222223333445566555544 4799885543 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+.+++.|++++ ++||| .| |--.+++.+.++.+ .+++-
T Consensus 85 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pnIv 157 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVA----GYYNRPSQEGLYQHFKMVHDAI--DIPIIVYNIPPRAVVDIKPETMARLAA-LPRIV 157 (297)
T ss_dssp HHHHHHHHHHTCSEEEECC----CTTTCCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHhcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCCCCCHHHHHHHHc-CCCEE
Confidence 9999999999999998853 2343332 256788899888 68876 45 65568888888654 35555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 158 gi 159 (297)
T 2rfg_A 158 GV 159 (297)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 280
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.79 E-value=0.032 Score=56.07 Aligned_cols=153 Identities=13% Similarity=0.165 Sum_probs=92.9
Q ss_pred HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcC
Q 009196 261 ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWG 340 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaG 340 (540)
+++. ++|||.|=+-. -.... ..|+-....-..+.+...++.|.+.+++||++-+-.|+-.+..++.+.++++.++|
T Consensus 30 ~~~~-~aG~~ai~vsg-~s~a~--~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~aG 105 (275)
T 2ze3_A 30 RLLE-AAGFTAIGTTS-AGIAH--ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAALG 105 (275)
T ss_dssp HHHH-HHTCSCEEECH-HHHHH--HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHTT
T ss_pred HHHH-HcCCCEEEECc-HHHHH--hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHcC
Confidence 3444 57999987741 11111 13444434455677788888888888999999999997556778899999999999
Q ss_pred CcEEEEecccccCccCCCcC----HHHHHHHHHHcCC-CceEEEeCCCCC------------HHHHHH---HHhcCCCcC
Q 009196 341 ASAVTVHGRTRQQRYSKLAD----WDYIYQCARKASD-DLQVLGNGDIYS------------YLDWNK---HKSDCPELA 400 (540)
Q Consensus 341 vdaItVHgRtr~q~y~g~ad----w~~I~~i~~~~~~-~IPVIgNGdI~s------------~eDa~~---~l~~~~gaD 400 (540)
+++|.|-+...... ....+ .+.|+.+++.... .+|++.+|.... .+++.+ .+.+ .|||
T Consensus 106 aagv~iED~~~~~~-k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~e-AGAd 183 (275)
T 2ze3_A 106 VAGVNLEDATGLTP-TELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYAD-AGAD 183 (275)
T ss_dssp CSEEEEECBCSSSS-SCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHH-TTCS
T ss_pred CcEEEECCCcCCCC-CccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHH-CCCC
Confidence 99999976542100 11111 2334444443100 367666665544 233321 2234 7999
Q ss_pred eeeecHHHHhCCCchHHHHhc
Q 009196 401 SCMIARGALIKPWIFTEIKEQ 421 (540)
Q Consensus 401 gVMIGRgaL~nPwif~eik~~ 421 (540)
+|++=- +.++..+.++.+.
T Consensus 184 ~i~~e~--~~~~~~~~~i~~~ 202 (275)
T 2ze3_A 184 GIFVPL--ALQSQDIRALADA 202 (275)
T ss_dssp EEECTT--CCCHHHHHHHHHH
T ss_pred EEEECC--CCCHHHHHHHHHh
Confidence 998842 3444566666554
No 281
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=95.77 E-value=0.25 Score=49.78 Aligned_cols=131 Identities=14% Similarity=0.057 Sum_probs=88.0
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 26 D~~~l~~lv~~li-~~Gv~gl~~~Gt--------tGE~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~a 91 (297)
T 3flu_A 26 HYEQLRDLIDWHI-ENGTDGIVAVGT--------TGESATL--SVEEHTAVIEAVVKHVAKRVPVIAGTGA---NNTVEA 91 (297)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESST--------TTTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCcc--------ccCcccC--CHHHHHHHHHHHHHHhCCCCcEEEeCCC---cCHHHH
Confidence 5678888888877 579999988732 1222222 3333445566555544 5799885432 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -.++++.|++++ ++||+ .| |--.+++.+.++. +++++-
T Consensus 92 i~la~~a~~~Gadavlv~~----P~y~~~~~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La-~~pniv 164 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV----PYYNKPSQEGIYQHFKTIAEAT--SIPMIIYNVPGRTVVSMTNDTILRLA-EIPNIV 164 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--CSCEEEEECHHHHSSCCCHHHHHHHT-TSTTEE
T ss_pred HHHHHHHHHcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEECCchhccCCCHHHHHHHH-cCCCEE
Confidence 9999999999999998853 2333332 267888999988 68887 44 6566888888755 446665
Q ss_pred eee
Q 009196 401 SCM 403 (540)
Q Consensus 401 gVM 403 (540)
||=
T Consensus 165 giK 167 (297)
T 3flu_A 165 GVK 167 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 282
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=95.70 E-value=0.048 Score=55.39 Aligned_cols=92 Identities=10% Similarity=0.134 Sum_probs=63.9
Q ss_pred HHHHHHhcccccc-cEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEE
Q 009196 300 KGIIEATSGTVDK-PITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVL 378 (540)
Q Consensus 300 ~eIv~av~~~v~i-PVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVI 378 (540)
.+-++++++..+. ++.|-+.. ..+ +..+.++|+|.|-++. .+.+.++++++.+..+++|.
T Consensus 196 ~~ai~~~r~~~~~~kI~vev~t--------lee-~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~ 256 (296)
T 1qap_A 196 RQAVEKAFWLHPDVPVEVEVEN--------LDE-LDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLE 256 (296)
T ss_dssp HHHHHHHHHHSTTSCEEEEESS--------HHH-HHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEE
T ss_pred HHHHHHHHHhCCCCcEEEEeCC--------HHH-HHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEE
Confidence 4555666555432 45553332 122 3444578999999974 45577788777775579999
Q ss_pred EeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 379 GNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 379 gNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
++||| +.+.+.++.+ +|+|++.+|.....-|+
T Consensus 257 ASGGI-t~~~i~~~a~--~GvD~isvGsli~~a~~ 288 (296)
T 1qap_A 257 VSGNV-TAETLREFAE--TGVDFISVGALTKHVRA 288 (296)
T ss_dssp ECCCS-CHHHHHHHHH--TTCSEEECSHHHHEEEC
T ss_pred EECCC-CHHHHHHHHH--cCCCEEEEeHHHcCCCC
Confidence 99999 9999999776 89999999985444443
No 283
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=95.68 E-value=0.23 Score=49.91 Aligned_cols=130 Identities=11% Similarity=0.071 Sum_probs=86.9
Q ss_pred cHHHHHHHHHHHHHh-CCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 252 YPDTLARTVELIDQQ-CTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~-aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
|.+.+.+-++.+. + .|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..+
T Consensus 22 D~~~l~~lv~~li-~~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~ 87 (293)
T 1f6k_A 22 NEKGLRQIIRHNI-DKMKVDGLYVGG----------STGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGS---VNLKE 87 (293)
T ss_dssp CHHHHHHHHHHHH-HTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCC---SCHHH
T ss_pred CHHHHHHHHHHHH-hhCCCcEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCC---CCHHH
Confidence 5677888888887 5 7999998863 122222223444445666665554 5788885532 35678
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCc
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~ga 399 (540)
++++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++||| .| |--.+++.+.++.+ ++++
T Consensus 88 ai~la~~a~~~Gadavlv~~----P~y~~~~~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 160 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVT----PFYYKFSFPEIKHYYDTIIAET--GSNMIVYSIPFLTGVNMGIEQFGELYK-NPKV 160 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHH--CCCEEEEECHHHHCCCCCHHHHHHHHT-STTE
T ss_pred HHHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEECccccCcCCCHHHHHHHhc-CCCE
Confidence 99999999999999998853 2343332 256788899888 58876 45 54468888888654 4555
Q ss_pred Cee
Q 009196 400 ASC 402 (540)
Q Consensus 400 DgV 402 (540)
-||
T Consensus 161 vgi 163 (293)
T 1f6k_A 161 LGV 163 (293)
T ss_dssp EEE
T ss_pred EEE
Confidence 555
No 284
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=95.68 E-value=0.038 Score=57.52 Aligned_cols=95 Identities=7% Similarity=-0.021 Sum_probs=71.1
Q ss_pred CchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 295 KPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 295 ~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
.++...+.++.+++...+||.+-+-. .. .+.++.+.++|++.|+|+.-. +.. ....+.++++++.+ +
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~--~~-----~e~a~~l~eaGad~I~ld~a~---G~~-~~~~~~i~~i~~~~--~ 145 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGV--NE-----IERAKLLVEAGVDVIVLDSAH---GHS-LNIIRTLKEIKSKM--N 145 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECT--TC-----HHHHHHHHHTTCSEEEECCSC---CSB-HHHHHHHHHHHHHC--C
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCC--CH-----HHHHHHHHHcCcCeEEEeCCC---CCc-HHHHHHHHHHHHhc--C
Confidence 46777788888887777888886643 21 577888999999999986321 111 12246788888888 6
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
+|||+ |.+.+++++..+.+ .|||+|.+|
T Consensus 146 ~~Viv-g~v~t~e~A~~l~~--aGaD~I~VG 173 (361)
T 3khj_A 146 IDVIV-GNVVTEEATKELIE--NGADGIKVG 173 (361)
T ss_dssp CEEEE-EEECSHHHHHHHHH--TTCSEEEEC
T ss_pred CcEEE-ccCCCHHHHHHHHH--cCcCEEEEe
Confidence 99987 56899999988665 799999986
No 285
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=95.68 E-value=0.19 Score=50.95 Aligned_cols=132 Identities=14% Similarity=0.028 Sum_probs=88.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+++.+ .+||.+-+ |- .+..++
T Consensus 34 D~~~l~~lv~~li-~~Gv~gi~v~Gt--------tGE~~~L--t~~Er~~v~~~~~~~~~grvpviaGv--g~-~~t~~a 99 (304)
T 3l21_A 34 DTATAARLANHLV-DQGCDGLVVSGT--------TGESPTT--TDGEKIELLRAVLEAVGDRARVIAGA--GT-YDTAHS 99 (304)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESST--------TTTGGGS--CHHHHHHHHHHHHHHHTTTSEEEEEC--CC-SCHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCcc--------ccchhhC--CHHHHHHHHHHHHHHhCCCCeEEEeC--CC-CCHHHH
Confidence 5678888888877 579999988631 1222222 3333345666665554 57888854 32 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -..+++.|++++ ++||+ .| |--.+++.+.++. +++++-
T Consensus 100 i~la~~a~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La-~~pnIv 172 (304)
T 3l21_A 100 IRLAKACAAEGAHGLLVVT----PYYSKPPQRGLQAHFTAVADAT--ELPMLLYDIPGRSAVPIEPDTIRALA-SHPNIV 172 (304)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHTSC--SSCEEEEECHHHHSSCCCHHHHHHHH-TSTTEE
T ss_pred HHHHHHHHHcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCCCCCHHHHHHHh-cCCCEE
Confidence 9999999999999998863 2333332 256778888887 68887 44 6667888888865 346665
Q ss_pred eeee
Q 009196 401 SCMI 404 (540)
Q Consensus 401 gVMI 404 (540)
||=-
T Consensus 173 giKd 176 (304)
T 3l21_A 173 GVXD 176 (304)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5533
No 286
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=95.67 E-value=0.17 Score=51.99 Aligned_cols=130 Identities=15% Similarity=0.135 Sum_probs=87.3
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. ..|+|+|=++.. .|-+.. -..+.-.++++.+++.+ .+||.+-+-. .+..++
T Consensus 53 D~~~l~~lv~~li-~~Gv~Gl~v~Gt--------TGE~~~--Ls~eEr~~vi~~~ve~~~grvpViaGvg~---~st~ea 118 (332)
T 2r8w_A 53 DIEAFSALIARLD-AAEVDSVGILGS--------TGIYMY--LTREERRRAIEAAATILRGRRTLMAGIGA---LRTDEA 118 (332)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEESST--------TTTGGG--SCHHHHHHHHHHHHHHHTTSSEEEEEECC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccChhh--CCHHHHHHHHHHHHHHhCCCCcEEEecCC---CCHHHH
Confidence 5677888888776 569999988631 122222 23444455666665554 4788886543 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++|||. | |--.+++.+.++.+ .+++-
T Consensus 119 i~la~~A~~~Gadavlv~~----P~Y~~~s~~~l~~~f~~VA~a~--~lPiilYn~P~~tg~~l~~e~~~~La~-~pnIv 191 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAP----VSYTPLTQEEAYHHFAAVAGAT--ALPLAIYNNPTTTRFTFSDELLVRLAY-IPNIR 191 (332)
T ss_dssp HHHHHHHHHHTCSEEEECC----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEECCHHHHCCCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHHc-CCCEE
Confidence 9999999999999998853 2343332 267788899988 689874 4 54468888888654 35555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 192 gi 193 (332)
T 2r8w_A 192 AI 193 (332)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 287
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.64 E-value=0.04 Score=54.17 Aligned_cols=137 Identities=8% Similarity=-0.016 Sum_probs=88.3
Q ss_pred EEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--------cccEEE
Q 009196 245 GVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--------DKPITI 316 (540)
Q Consensus 245 ~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--------~iPVtV 316 (540)
-+-|+-.+|+.+.+.+. ++|+|+|=+|.+... . +.++++.+++.. +.-+.|
T Consensus 73 DvhLMv~~p~~~i~~~~----~aGAd~itvH~ea~~--------------~---~~~~i~~i~~~~~~~~~~~~g~~~gv 131 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAVV----ANGANLVTLQLEQYH--------------D---FALTIEWLAKQKTTYANQVYPVLIGA 131 (237)
T ss_dssp EEEEECSCHHHHHHHHH----HTTCSEEEEETTCTT--------------S---HHHHHHHHTTCEEEETTEEEECEEEE
T ss_pred CeEEEEECHHHHHHHHH----HcCCCEEEEecCCcc--------------c---HHHHHHHHHhcccccccccCCceEEE
Confidence 78888889988877663 579999999965321 1 345666666541 333333
Q ss_pred EecCCCCCChhHHHHHHHHHHHcCCcEEEE---ecccccCccCCCcCHHHHHHHHHHcCC---CceEEEeCCCCCHHHHH
Q 009196 317 KVRTGYFEGKNRIDSLIADIGTWGASAVTV---HGRTRQQRYSKLADWDYIYQCARKASD---DLQVLGNGDIYSYLDWN 390 (540)
Q Consensus 317 KiR~G~~e~~~~~~~la~~leeaGvdaItV---HgRtr~q~y~g~adw~~I~~i~~~~~~---~IPVIgNGdI~s~eDa~ 390 (540)
=+..+. ..+. ++.+. .++|.|.+ |+....|.+ .+...+.++++++.... ++||.+-||| +.+.+.
T Consensus 132 ~l~p~T--p~~~----l~~~l-~~~D~vlvMsv~pgfggq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI-~~~~~~ 202 (237)
T 3cu2_A 132 CLCPET--PISE----LEPYL-DQIDVIQLLTLDPRNGTKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSM-TLELAK 202 (237)
T ss_dssp EECTTS--CGGG----GTTTT-TTCSEEEEESEETTTTEECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSC-CHHHHH
T ss_pred EEeCCC--hHHH----HHHHh-hcCceeeeeeeccCcCCeec-ChhHHHHHHHHHHHHHhcCCCceEEEECCc-CHHHHH
Confidence 332221 1111 22221 27999954 776665554 23446777788776521 4899999999 588888
Q ss_pred HHHhcCCCcCeeeecHHHHhC
Q 009196 391 KHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 391 ~~l~~~~gaDgVMIGRgaL~n 411 (540)
.+.+...|||++.+|++++..
T Consensus 203 ~~~~~~aGad~~VvGSaIf~~ 223 (237)
T 3cu2_A 203 YFKQGTHQIDWLVSGSALFSG 223 (237)
T ss_dssp HHHHSSSCCCCEEECGGGGSS
T ss_pred HHHHhCCCCcEEEEeeHHhCC
Confidence 877611489999999998875
No 288
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=95.62 E-value=0.14 Score=52.19 Aligned_cols=125 Identities=10% Similarity=0.087 Sum_probs=92.4
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
.+++.+.+.++.+. +.||..|-|..|. ..++.-.+.|+++++++ ++.+.|-.--+| +..+
T Consensus 115 ~~~e~~~~~a~~~~-~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~--~~~~ 176 (332)
T 2ozt_A 115 GSGQAALEQWQQSW-QRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSW--DRAT 176 (332)
T ss_dssp CTGGGHHHHHHHHH-HTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCC--CHHH
T ss_pred CChHHHHHHHHHHH-HcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCC--CHHH
Confidence 45677777776665 4699999997652 13555567788888877 356666666667 4578
Q ss_pred HHHHHHHHHHc---CCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 329 IDSLIADIGTW---GASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 329 ~~~la~~leea---GvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.++++.|++. ++.+| +|.. .+.||+..+++++.+ ++||.+.=.+.+..++.+++.. ..+|.+.+
T Consensus 177 A~~~~~~l~~~~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~ipIa~dEs~~~~~~~~~~~~~-~a~~~i~i 244 (332)
T 2ozt_A 177 ANRWFAWLDRHGNGKIEYV-------EQPL-PPDQWQALLSLAQTV--TTAIALDESVVSAAEVQRWVDR-GWPGFFVI 244 (332)
T ss_dssp HHHHHHHHHHHCCTTEEEE-------ECCS-CTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHT-TCCSEEEE
T ss_pred HHHHHHHHHhhccCCccee-------ECCC-CCCCHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHh-CCCCEEEE
Confidence 89999999988 65544 4444 345899999999988 6999999899999999998875 55676665
No 289
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=95.62 E-value=0.12 Score=52.72 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=85.9
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
-|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+++.+ .+||.+-+ |- +..+
T Consensus 30 iD~~~l~~lv~~li-~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--g~--st~~ 94 (314)
T 3d0c_A 30 IDWKGLDDNVEFLL-QNGIEVIVPNG----------NTGEFYALTIEEAKQVATRVTELVNGRATVVAGI--GY--SVDT 94 (314)
T ss_dssp BCHHHHHHHHHHHH-HTTCSEECTTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--CS--SHHH
T ss_pred CCHHHHHHHHHHHH-HcCCCEEEECc----------ccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC--Cc--CHHH
Confidence 36678888888877 57999987752 122222223344445566655544 57888855 43 4578
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e--CCCCCHHHHHHHHhcCCCcCee
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N--GDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N--GdI~s~eDa~~~l~~~~gaDgV 402 (540)
++++++.++++|+|++.+.. ..|.++. -+.+.+.|++++ ++|||. | |- .+++.+.++.+ ++++-||
T Consensus 95 ai~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~tg~-l~~~~~~~La~-~pnIvgi 166 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQ----PVHPYITDAGAVEYYRNIIEAL--DAPSIIYFKDAH-LSDDVIKELAP-LDKLVGI 166 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECC----CCCSCCCHHHHHHHHHHHHHHS--SSCEEEEECCTT-SCTHHHHHHTT-CTTEEEE
T ss_pred HHHHHHHHHHcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEeCCCC-cCHHHHHHHHc-CCCEEEE
Confidence 99999999999999998853 2343332 256788899988 699875 4 54 78888888543 4555554
No 290
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=95.59 E-value=0.22 Score=50.37 Aligned_cols=131 Identities=16% Similarity=0.137 Sum_probs=87.0
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+.. -..+.-.++++.+++.+ .+||.+-+.. .+..++
T Consensus 30 D~~~l~~lv~~li-~~Gv~Gl~v~Gt--------TGE~~~--Ls~eEr~~v~~~~~~~~~grvpViaGvg~---~~t~~a 95 (303)
T 2wkj_A 30 DKASLRRLVQFNI-QQGIDGLYVGGS--------TGEAFV--QSLSEREQVLEIVAEEAKGKIKLIAHVGC---VSTAES 95 (303)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESST--------TTTGGG--SCHHHHHHHHHHHHHHHTTTSEEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECee--------ccChhh--CCHHHHHHHHHHHHHHhCCCCcEEEecCC---CCHHHH
Confidence 5678888888877 579999988631 122222 23344445566655544 5788885532 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -.++++.|+++++ ++|||. | |--.+++.+.++.+ .+++-
T Consensus 96 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~~-~lPiilYn~P~~tg~~l~~~~~~~La~-~pnIv 169 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT----PFYYPFSFEEHCDHYRAIIDSAD-GLPMVVYNIPALSGVKLTLDQINTLVT-LPGVG 169 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHHT-TCCEEEEECHHHHCCCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHhCCCCEEEecC----CCCCCCCHHHHHHHHHHHHHhCC-CCCEEEEeCccccCCCCCHHHHHHHhc-CCCEE
Confidence 9999999999999998853 2343332 2567888998883 288764 5 54468888888654 46665
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 170 gi 171 (303)
T 2wkj_A 170 AL 171 (303)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 291
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=95.58 E-value=0.11 Score=54.86 Aligned_cols=125 Identities=10% Similarity=-0.021 Sum_probs=93.0
Q ss_pred CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChh
Q 009196 250 GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKN 327 (540)
Q Consensus 250 G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~ 327 (540)
...++.+++.|+... ..||..+-|..|-. ++...+.++++|+++ ++.+.|-.-.+| +..
T Consensus 186 ~~~~~~~~~~a~~~~-~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~--~~~ 246 (412)
T 4h1z_A 186 EDTRAKRAELAAAWQ-AKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAH--TAS 246 (412)
T ss_dssp CSSHHHHHHHHHHHH-HTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCC--CHH
T ss_pred CCcHHHHHHHHHHHH-hcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCC--CHH
Confidence 456788888887766 56999998854321 122334566777766 456667666677 467
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
++..+++.|++.|+.+| +|.. .+.|++..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|++
T Consensus 247 ~A~~~~~~l~~~~l~~i-------EqP~-~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~div~~ 312 (412)
T 4h1z_A 247 EAVALIKAMEPHGLWFA-------EAPV-RTEDIDGLARVAASV--STAIAVGEEWRTVHDMVPRVAR-RALAIVQP 312 (412)
T ss_dssp HHHHHHHHHGGGCEEEE-------ECCS-CTTCHHHHHHHHHHC--SSEEEECTTCCSHHHHHHHHHT-TCCSEECC
T ss_pred HHHHHHHhhccccccee-------cCCC-CccchHHHHHHHhhc--CCccccCCcccchHhHHHHHHc-CCCCEEEe
Confidence 89999999999987765 3443 345789999999998 7999999999999999998886 67887764
No 292
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=95.58 E-value=0.22 Score=51.36 Aligned_cols=131 Identities=18% Similarity=0.071 Sum_probs=86.7
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+.. -..+.-.++++.+++.+ .+||.+-+-. .+..++
T Consensus 50 D~~~l~~lv~~li-~~Gv~Gl~v~Gt--------TGE~~~--Ls~eEr~~vi~~~ve~~~grvpViaGvg~---~st~ea 115 (343)
T 2v9d_A 50 DKPGTAALIDDLI-KAGVDGLFFLGS--------GGEFSQ--LGAEERKAIARFAIDHVDRRVPVLIGTGG---TNARET 115 (343)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEESST--------TTTGGG--SCHHHHHHHHHHHHHHHTTSSCEEEECCS---SCHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCcc--------ccChhh--CCHHHHHHHHHHHHHHhCCCCcEEEecCC---CCHHHH
Confidence 5677888888877 579999988631 122222 23344445566665554 5799885542 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+.+...|++++ ++|||. | |--.+++.+.++..+++++-
T Consensus 116 i~la~~A~~~Gadavlv~~----P~Y~~~s~~~l~~~f~~VA~a~--~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIv 189 (343)
T 2v9d_A 116 IELSQHAQQAGADGIVVIN----PYYWKVSEANLIRYFEQVADSV--TLPVMLYNFPALTGQDLTPALVKTLADSRSNII 189 (343)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CSSSCCCHHHHHHHHHHHHHTC--SSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEE
Confidence 9999999999999998853 2343332 256778888887 688764 5 54458888888651335555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 190 gi 191 (343)
T 2v9d_A 190 GI 191 (343)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 293
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=95.58 E-value=0.13 Score=53.16 Aligned_cols=110 Identities=13% Similarity=0.065 Sum_probs=86.8
Q ss_pred hCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcE
Q 009196 266 QCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASA 343 (540)
Q Consensus 266 ~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvda 343 (540)
..||..+-+..|- +++.-.+.|+++++++ ++.+.|-.--+| +..++.++++.|++.|+.+
T Consensus 157 ~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~--~~~~A~~~~~~l~~~~i~~ 218 (378)
T 4hpn_A 157 AEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGY--TVTEAITLGDRAAGFGIDW 218 (378)
T ss_dssp HTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCC--CHHHHHHHHHHHGGGCCSC
T ss_pred HhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCccc--CHHHHHHHHhhhhhcccch
Confidence 3599999887542 2455567788888887 567777767777 4678999999999999887
Q ss_pred EEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 344 VTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 344 ItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
| +|.. .+.|++..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|++
T Consensus 219 i-------EeP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~a~d~i~~ 268 (378)
T 4hpn_A 219 F-------EEPV-VPEQLDAYARVRAGQ--PIPVAGGETWHGRYGMWQALSA-GAVDILQP 268 (378)
T ss_dssp E-------ECCS-CTTCHHHHHHHHHHS--SSCEEECTTCCHHHHHHHHHHT-TCCSEECC
T ss_pred h-------hcCC-CccchhhhHHHHhhC--CceeeCCcCccchHhHHHHHHc-CCCCEEee
Confidence 6 3443 345899999999998 7999999999999999999886 77888864
No 294
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=95.58 E-value=0.071 Score=56.91 Aligned_cols=124 Identities=10% Similarity=0.079 Sum_probs=95.5
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+|+.+++.|+.+.++.||..|-|..|-. +++.-.+.|+++|+++ ++++.|-.--+|+ ..++
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~--~~~A 249 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWT--VETS 249 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSC--HHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCC--HHHH
Confidence 57899988888765345999999975431 3444456778888877 6678887777884 5788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
..+++.|++. +.+| +|.. .+++..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|++=
T Consensus 250 i~~~~~L~~~-l~~i-------EeP~---~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~a~dii~~d 311 (441)
T 3vc5_A 250 IRVGRALDGV-LEYL-------EDPT---PGIDGMARVAAEV--PMPLATNMCVVTPEHLPAAVER-RPIGVLLID 311 (441)
T ss_dssp HHHHHHTTTT-CSEE-------ECCS---SSHHHHHHHHTTS--SSCEEESSSCCSGGGHHHHHHH-CCCSEEEEC
T ss_pred HHHHHHHHHH-HHHh-------hccC---CCHHHHHHHHhcC--CCCEEeCCCCCCHHHHHHHHHh-CCCCEEeec
Confidence 9999999887 7666 3443 3788889999988 6999998889999999998886 779988873
No 295
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=95.55 E-value=0.29 Score=49.20 Aligned_cols=131 Identities=17% Similarity=0.124 Sum_probs=86.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+++.+ .+||.+-+-. .+..++
T Consensus 19 D~~~l~~lv~~li-~~Gv~gl~~~Gt--------tGE~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~a 84 (294)
T 2ehh_A 19 DYEALGNLIEFHV-DNGTDAILVCGT--------TGESPTL--TFEEHEKVIEFAVKRAAGRIKVIAGTGG---NATHEA 84 (294)
T ss_dssp CHHHHHHHHHHHH-TTTCCEEEESST--------TTTGGGS--CHHHHHHHHHHHHHHHTTSSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECcc--------ccChhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC---CCHHHH
Confidence 5677888888877 679999988631 1222222 3333345555555544 4788875532 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+.+...|++++ ++|||. | |--.+++.+.++..+++++-
T Consensus 85 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~~~pniv 158 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV----PYYNKPTQRGLYEHFKTVAQEV--DIPIIIYNIPSRTCVEISVDTMFKLASECENIV 158 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--CSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEE
Confidence 9999999999999998853 2343332 256788899888 689764 5 54568898888651335555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 159 gi 160 (294)
T 2ehh_A 159 AS 160 (294)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 296
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=95.53 E-value=0.3 Score=49.23 Aligned_cols=132 Identities=18% Similarity=0.127 Sum_probs=87.2
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEecCCCCCChhH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR~G~~e~~~~ 328 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+ |- .+..+
T Consensus 26 D~~~l~~lv~~li-~~Gv~gl~v~Gt--------tGE~~~L--s~~Er~~v~~~~~~~~~g~rvpviaGv--g~-~~t~~ 91 (301)
T 3m5v_A 26 DEQSYARLIKRQI-ENGIDAVVPVGT--------TGESATL--THEEHRTCIEIAVETCKGTKVKVLAGA--GS-NATHE 91 (301)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEECSST--------TTTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEEEC--CC-SSHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccChhhC--CHHHHHHHHHHHHHHhCCCCCeEEEeC--CC-CCHHH
Confidence 6678888888877 579999988631 1222222 3333345555555544 36888854 32 35678
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCc
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~ga 399 (540)
++++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++||+ .| |--.+++.+.++.+.++++
T Consensus 92 ai~la~~a~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~~~pni 165 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVA----PYYNKPTQQGLYEHYKAIAQSV--DIPVLLYNVPGRTGCEISTDTIIKLFRDCENI 165 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEeCchhhCcCCCHHHHHHHHhcCCCE
Confidence 99999999999999998863 2333332 257788899888 68887 44 6666888888765422555
Q ss_pred Ceee
Q 009196 400 ASCM 403 (540)
Q Consensus 400 DgVM 403 (540)
-||=
T Consensus 166 vgiK 169 (301)
T 3m5v_A 166 YGVK 169 (301)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 297
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=95.51 E-value=0.31 Score=48.97 Aligned_cols=130 Identities=15% Similarity=0.079 Sum_probs=86.2
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+.. .+..++
T Consensus 21 D~~~l~~lv~~li-~~Gv~gl~v~Gt--------tGE~~~L--t~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~a 86 (292)
T 3daq_A 21 NLEALKAHVNFLL-ENNAQAIIVNGT--------TAESPTL--TTDEKELILKTVIDLVDKRVPVIAGTGT---NDTEKS 86 (292)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESSG--------GGTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccccccC--CHHHHHHHHHHHHHHhCCCCcEEEeCCc---ccHHHH
Confidence 5677888888776 679999988631 1222222 2333344555555544 5799985432 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -.++.+.|++++ ++||+ .| |--.+++.+.++.+ ++++-
T Consensus 87 i~la~~a~~~Gadavlv~~----P~y~~~~~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pniv 159 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT----PYYNKTNQRGLVKHFEAIADAV--KLPVVLYNVPSRTNMTIEPETVEILSQ-HPYIV 159 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHH--CSCEEEEECHHHHSCCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHHcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEecccccCCCCCHHHHHHHhc-CCCEE
Confidence 9999999999999998853 2333332 256788898888 68876 44 66668888887554 45555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 160 gi 161 (292)
T 3daq_A 160 AL 161 (292)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 298
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.48 E-value=0.088 Score=53.30 Aligned_cols=155 Identities=12% Similarity=0.118 Sum_probs=93.0
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
|+++. ++|||.|=+-- .....+ .|+-....-..+.+...+++|.+.+++||++-+-.|+- +..++.+.++++.++
T Consensus 28 A~~~~-~aG~~ai~vs~-~~~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~~~~~v~~l~~a 102 (290)
T 2hjp_A 28 AKLAE-QAGFGGIWGSG-FELSAS--YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFG-NAVNVHYVVPQYEAA 102 (290)
T ss_dssp HHHHH-HHTCSEEEECH-HHHHHH--TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTS-SHHHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEECh-HHHHHh--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHHHHHHHh
Confidence 33444 57999997641 111111 34433344566788888999999999999999999964 677889999999999
Q ss_pred CCcEEEEeccccc--CccCC-----CcCH-HHH---HHHHHHcC-CCceEEEeCCCC-C---HHHHHH---HHhcCCCcC
Q 009196 340 GASAVTVHGRTRQ--QRYSK-----LADW-DYI---YQCARKAS-DDLQVLGNGDIY-S---YLDWNK---HKSDCPELA 400 (540)
Q Consensus 340 GvdaItVHgRtr~--q~y~g-----~adw-~~I---~~i~~~~~-~~IPVIgNGdI~-s---~eDa~~---~l~~~~gaD 400 (540)
|+++|.|-+.... .+..+ .... +++ +.+++... .+.-|++=-|-. . .+++.+ .+.+ .|||
T Consensus 103 Ga~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e-AGAd 181 (290)
T 2hjp_A 103 GASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEE-AGAD 181 (290)
T ss_dssp TCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHH-TTCS
T ss_pred CCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHH-cCCc
Confidence 9999999775421 11111 1122 334 44444421 135566655544 1 344432 2334 7999
Q ss_pred eeeecHHHHhCCCchHHHHhc
Q 009196 401 SCMIARGALIKPWIFTEIKEQ 421 (540)
Q Consensus 401 gVMIGRgaL~nPwif~eik~~ 421 (540)
+|++=-+ +.++..+.++.+.
T Consensus 182 ~i~~e~~-~~~~~~~~~i~~~ 201 (290)
T 2hjp_A 182 AILIHSR-QKTPDEILAFVKS 201 (290)
T ss_dssp EEEECCC-CSSSHHHHHHHHH
T ss_pred EEEeCCC-CCCHHHHHHHHHH
Confidence 9988311 2445556666543
No 299
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=95.44 E-value=0.087 Score=52.74 Aligned_cols=92 Identities=13% Similarity=0.056 Sum_probs=61.7
Q ss_pred HHHHHHhccccc--ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHH----cCC
Q 009196 300 KGIIEATSGTVD--KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARK----ASD 373 (540)
Q Consensus 300 ~eIv~av~~~v~--iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~----~~~ 373 (540)
.+-++++++..+ .++.|-+.. .+ + +..+.++|+|.|-++.- +.+.++++++. .+
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~t-----le---e-~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~- 228 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECES-----FE---E-AKNAMNAGADIVMCDNL----------SVLETKEIAAYRDAHYP- 228 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEESS-----HH---H-HHHHHHHTCSEEEEETC----------CHHHHHHHHHHHHHHCT-
T ss_pred HHHHHHHHHhCCCCceEEEEcCC-----HH---H-HHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCC-
Confidence 455666776653 355553332 12 2 33344689999999751 23455544433 33
Q ss_pred CceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 374 DLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 374 ~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
++||.++||| +++.+.++++ +|+|++.+|.....-|++
T Consensus 229 ~~~i~AsGGI-~~~ni~~~~~--aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 229 FVLLEASGNI-SLESINAYAK--SGVDAISVGALIHQATFI 266 (273)
T ss_dssp TCEEEEESSC-CTTTHHHHHT--TTCSEEECTHHHHTCCCC
T ss_pred CcEEEEECCC-CHHHHHHHHH--cCCcEEEEcHHhcCCCCC
Confidence 5999999999 9999999776 899999999887665653
No 300
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=95.43 E-value=0.22 Score=50.42 Aligned_cols=131 Identities=15% Similarity=0.126 Sum_probs=86.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+++.+ .+||.+-+.. .+..++
T Consensus 31 D~~~l~~lv~~li-~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~---~st~~a 96 (306)
T 1o5k_A 31 DLESYERLVRYQL-ENGVNALIVLG----------TTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGT---NSTEKT 96 (306)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCC---ccHHHH
Confidence 6778888888877 57999998863 122222223333445566555544 5799885533 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++++.|++++ ++|||. | |--.+++.+.++..+.+++-
T Consensus 97 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIv 170 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVT----PYYNKPTQEGLYQHYKYISERT--DLGIVVYNVPGRTGVNVLPETAARIAADLKNVV 170 (306)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHTTC--SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEeCccccCcCCCHHHHHHHHHhCCCEE
Confidence 9999999999999998853 2343332 256778888877 688764 4 54458888888651335555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 171 gi 172 (306)
T 1o5k_A 171 GI 172 (306)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 301
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=95.37 E-value=0.037 Score=53.80 Aligned_cols=150 Identities=11% Similarity=0.061 Sum_probs=96.3
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcc-----c------ccCCccccccCCchHHHHH-------
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDI-----V------VNKGAGSCLLTKPMRMKGI------- 302 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~-----v------~~~G~GsaLl~~p~~l~eI------- 302 (540)
..+++.=|.+.+++.....|+.+. +.|++.|||-+--|... + .--|.|.-| +++.+...
T Consensus 12 ~~~vi~Vir~~~~~~a~~~a~al~-~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVl--t~~~a~~ai~AGA~f 88 (217)
T 3lab_A 12 TKPLIPVIVIDDLVHAIPMAKALV-AGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVC--TADDFQKAIDAGAQF 88 (217)
T ss_dssp SCSEEEEECCSCGGGHHHHHHHHH-HTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCC--SHHHHHHHHHHTCSE
T ss_pred hCCEEEEEEcCCHHHHHHHHHHHH-HcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeecccc--CHHHHHHHHHcCCCE
Confidence 456777789999999999999887 78999999976544210 0 011444322 44444443
Q ss_pred ----------HHHhcccccc------cEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHH
Q 009196 303 ----------IEATSGTVDK------PITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQ 366 (540)
Q Consensus 303 ----------v~av~~~v~i------PVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~ 366 (540)
++..++ .++ |+.--+-+ ..+ +..+.++|+|.|-++.-. ... ..++++.
T Consensus 89 ivsP~~~~evi~~~~~-~~v~~~~~~~~~PG~~T--------ptE-~~~A~~~Gad~vK~FPa~---~~g---G~~~lka 152 (217)
T 3lab_A 89 IVSPGLTPELIEKAKQ-VKLDGQWQGVFLPGVAT--------ASE-VMIAAQAGITQLKCFPAS---AIG---GAKLLKA 152 (217)
T ss_dssp EEESSCCHHHHHHHHH-HHHHCSCCCEEEEEECS--------HHH-HHHHHHTTCCEEEETTTT---TTT---HHHHHHH
T ss_pred EEeCCCcHHHHHHHHH-cCCCccCCCeEeCCCCC--------HHH-HHHHHHcCCCEEEECccc---ccc---CHHHHHH
Confidence 333322 134 44442211 112 334578899999886421 111 2589999
Q ss_pred HHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 367 CARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 367 i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
++..++ ++|++..|||+ ++.+.+++. .|+..+..| .+|..|.+
T Consensus 153 l~~p~p-~i~~~ptGGI~-~~N~~~~l~--aGa~~~vgG-s~l~~~~~ 195 (217)
T 3lab_A 153 WSGPFP-DIQFCPTGGIS-KDNYKEYLG--LPNVICAGG-SWLTESKL 195 (217)
T ss_dssp HHTTCT-TCEEEEBSSCC-TTTHHHHHH--STTBCCEEE-SGGGCHHH
T ss_pred HHhhhc-CceEEEeCCCC-HHHHHHHHH--CCCEEEEEC-hhhcChhH
Confidence 998887 79999999996 899999897 678777665 55555543
No 302
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.36 E-value=0.055 Score=58.81 Aligned_cols=71 Identities=8% Similarity=0.027 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
+..+.+..|.++|++.|.|..-. .. ...-++.++++++.++ ++||++ |+|.+.+++..+.+ .|||+|.+|-
T Consensus 256 d~~era~aLveaGvd~I~Id~a~---g~-~~~v~~~i~~i~~~~~-~~~vi~-g~v~t~e~a~~~~~--aGad~i~vg~ 326 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAH---GH-SQGVIDKVKEVRAKYP-SLNIIA-GNVATAEATKALIE--AGANVVKVGI 326 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC---TT-SHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHH--HTCSEEEECS
T ss_pred chHHHHHHHHhhccceEEecccc---cc-hhhhhhHHHHHHHhCC-CceEEe-eeeccHHHHHHHHH--hCCCEEEECC
Confidence 34677888999999999997432 11 1123678999999886 588885 78999999999776 7999998853
No 303
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.32 E-value=0.076 Score=53.87 Aligned_cols=153 Identities=8% Similarity=0.069 Sum_probs=90.2
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
|+++. ++|||.|=+--+ ....+ ..|+-....-..+.+...+++|.+.++.||++-+-.|+-.+..++.+.++++.++
T Consensus 30 A~~~~-~aG~~ai~vs~~-~~a~~-~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~~~~~v~~l~~a 106 (295)
T 1xg4_A 30 ALLAQ-RAGYQAIYLSGG-GVAAG-SLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFGSSAFNVARTVKSMIKA 106 (295)
T ss_dssp HHHHH-HTTCSCEEECHH-HHHHT-TTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSSSSHHHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEECch-Hhhhh-hcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccCCCHHHHHHHHHHHHHc
Confidence 44454 689999866311 11110 1233333344567777888888888899999999999755677889999999999
Q ss_pred CCcEEEEecccccCc--cCC---Cc-CHHH---HHHHHHHcCCCceEEEeCCCCCH-----H----HHHHHHhcCCCcCe
Q 009196 340 GASAVTVHGRTRQQR--YSK---LA-DWDY---IYQCARKASDDLQVLGNGDIYSY-----L----DWNKHKSDCPELAS 401 (540)
Q Consensus 340 GvdaItVHgRtr~q~--y~g---~a-dw~~---I~~i~~~~~~~IPVIgNGdI~s~-----e----Da~~~l~~~~gaDg 401 (540)
|+++|.|-+.....+ ..+ .. .-+. |+.++++.. ..+++.+|..... + ++.. +++ .|||+
T Consensus 107 Ga~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~-~~~~~i~aRtda~~~~gl~~ai~ra~a-y~e-AGAd~ 183 (295)
T 1xg4_A 107 GAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKT-DPDFVIMARTDALAVEGLDAAIERAQA-YVE-AGAEM 183 (295)
T ss_dssp TCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCS-STTSEEEEEECCHHHHCHHHHHHHHHH-HHH-TTCSE
T ss_pred CCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhcc-CCCcEEEEecHHhhhcCHHHHHHHHHH-HHH-cCCCE
Confidence 999999977642111 111 11 1233 444444431 2344444444332 2 3333 334 79999
Q ss_pred eeecHHHHhCCCchHHHHh
Q 009196 402 CMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 402 VMIGRgaL~nPwif~eik~ 420 (540)
|++= + +.++..+.++.+
T Consensus 184 i~~e-~-~~~~~~~~~i~~ 200 (295)
T 1xg4_A 184 LFPE-A-ITELAMYRQFAD 200 (295)
T ss_dssp EEET-T-CCSHHHHHHHHH
T ss_pred EEEe-C-CCCHHHHHHHHH
Confidence 9884 1 233345555554
No 304
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=95.31 E-value=0.34 Score=49.02 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=85.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+++.+ .+||.+-+-. .+..++
T Consensus 35 D~~~l~~lv~~li-~~Gv~gl~v~Gt--------tGE~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg~---~st~~a 100 (304)
T 3cpr_A 35 DIAAGREVAAYLV-DKGLDSLVLAGT--------TGESPTT--TAAEKLELLKAVREEVGDRAKLIAGVGT---NNTRTS 100 (304)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESST--------TTTTTTS--CHHHHHHHHHHHHHHHTTTSEEEEECCC---SCHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccChhhC--CHHHHHHHHHHHHHHhCCCCcEEecCCC---CCHHHH
Confidence 5678888888877 579999988631 1222222 3333345555555544 4788885532 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -++++..|++.+ ++|||. | |--.+++.+.++.+ ++++-
T Consensus 101 i~la~~A~~~Gadavlv~~----P~y~~~~~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pnIv 173 (304)
T 3cpr_A 101 VELAEAAASAGADGLLVVT----PYYSKPSQEGLLAHFGAIAAAT--EVPICLYDIPGRSGIPIESDTMRRLSE-LPTIL 173 (304)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--CSCEEEEECHHHHSSCCCHHHHHHHTT-STTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHHc-CCCEE
Confidence 9999999999999998852 2343332 256788889888 688764 5 54458888877543 35444
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 174 gi 175 (304)
T 3cpr_A 174 AV 175 (304)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 305
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=95.18 E-value=0.25 Score=50.07 Aligned_cols=131 Identities=9% Similarity=0.056 Sum_probs=87.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++
T Consensus 27 D~~~l~~lv~~li-~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~a 92 (309)
T 3fkr_A 27 DLASQKRAVDFMI-DAGSDGLCILA----------NFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSH---YSTQVC 92 (309)
T ss_dssp CHHHHHHHHHHHH-HTTCSCEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCC---chHHHH
Confidence 6678888888877 57999998863 122222223344445666665554 5799986532 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCcc---CCCc---CHHHHHHHHHHcCCCceEE-Ee----CCCCCHHHHHHHHhcCCC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRY---SKLA---DWDYIYQCARKASDDLQVL-GN----GDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y---~g~a---dw~~I~~i~~~~~~~IPVI-gN----GdI~s~eDa~~~l~~~~g 398 (540)
+++++.++++|+|++.+.. ..| .++. -+++++.|++.+ ++||| .| |--.+++.+.++.+++++
T Consensus 93 i~la~~A~~~Gadavlv~~----Pyy~~~~~~s~~~l~~~f~~va~a~--~lPiilYn~P~tg~~l~~~~~~~La~~~pn 166 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMP----PYHGATFRVPEAQIFEFYARVSDAI--AIPIMVQDAPASGTALSAPFLARMAREIEQ 166 (309)
T ss_dssp HHHHHHHHHTTCSEEEECC----SCBTTTBCCCHHHHHHHHHHHHHHC--SSCEEEEECGGGCCCCCHHHHHHHHHHSTT
T ss_pred HHHHHHHHHcCCCEEEEcC----CCCccCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCCCCCCCCCHHHHHHHHhhCCC
Confidence 9999999999999998853 233 2222 267888999988 68876 34 555688888886543455
Q ss_pred cCee
Q 009196 399 LASC 402 (540)
Q Consensus 399 aDgV 402 (540)
+-||
T Consensus 167 Ivgi 170 (309)
T 3fkr_A 167 VAYF 170 (309)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5444
No 306
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.15 E-value=0.27 Score=49.40 Aligned_cols=109 Identities=15% Similarity=0.105 Sum_probs=75.8
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCC-CCCChhHHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTG-YFEGKNRIDSLIADI 336 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G-~~e~~~~~~~la~~l 336 (540)
.|+++. ++|||.| += |--... ..-|+-..+.-..+.+...+++|++.+ ..||++-+-.| + .+..++.+-+.++
T Consensus 41 sA~l~e-~aG~d~i-lv-GdSl~~-~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY-~s~~~a~~~a~rl 115 (275)
T 3vav_A 41 FAALLD-RANVDVQ-LI-GDSLGN-VLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTY-GTPADAFASAVKL 115 (275)
T ss_dssp HHHHHH-HTTCSEE-EE-CTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSC-SSHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEE-EE-CcHHHH-HHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCC-CCHHHHHHHHHHH
Confidence 344454 7899999 42 322211 223554445555677778888888887 48999999985 6 7778888888888
Q ss_pred HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCC
Q 009196 337 GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDI 383 (540)
Q Consensus 337 eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI 383 (540)
.++|+++|.|-+.. .-.+.|+.+.+. .|||+|.=++
T Consensus 116 ~kaGa~aVklEdg~--------~~~~~i~~l~~~---GIpv~gHlgl 151 (275)
T 3vav_A 116 MRAGAQMVKFEGGE--------WLAETVRFLVER---AVPVCAHVGL 151 (275)
T ss_dssp HHTTCSEEEEECCG--------GGHHHHHHHHHT---TCCEEEEEES
T ss_pred HHcCCCEEEECCch--------hHHHHHHHHHHC---CCCEEEecCC
Confidence 88999999997642 224667777763 5999986443
No 307
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=95.14 E-value=0.18 Score=48.73 Aligned_cols=140 Identities=5% Similarity=-0.083 Sum_probs=88.7
Q ss_pred CCeEEEEecCC-cHHHHHHHHHHHHHhCCCCEEEecCCCC-CcccccCCccccccCCchHHHHHHHHhcccccccEEEEe
Q 009196 241 EDLFGVQICGA-YPDTLARTVELIDQQCTVDFIDINMGCP-IDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKV 318 (540)
Q Consensus 241 e~p~~vQL~G~-~p~~~a~AA~~~~~~aG~D~IDIN~GCP-~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKi 318 (540)
+.+++.=+=-. -|...+.+++.+. ++ +|.|.+|.... .+.+ + + + +. +.-|++=+
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~-~~-ad~vTvh~~~G~~~~~----------~-~--~----~~-----~~~v~vLt 105 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELK-DI-TNSFIAHAFVGVEGSL----------A-S--L----SQ-----RVDLFLVL 105 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHT-TT-CSEEEEEGGGCTTTTH----------H-H--H----HH-----HSEEEEEC
T ss_pred CCcEEEEecccCchhHHHHHHHHHH-Hh-hheEEEeCCCCcHHHH----------H-h--H----hc-----CCCEEEEE
Confidence 45565544433 4677777887776 67 99999995333 2111 1 0 0 10 11255544
Q ss_pred cCCCCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCH-HHHHHHHhcC
Q 009196 319 RTGYFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSY-LDWNKHKSDC 396 (540)
Q Consensus 319 R~G~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~-eDa~~~l~~~ 396 (540)
+++..+. .+.+..+++...++|++.+.+.+ ..++.+..+++.++ + .++..|||.-- .+..+++.
T Consensus 106 s~s~~~~~~~~v~~~a~~a~~~G~~GvV~sa----------t~~~e~~~ir~~~~-~-f~~v~pGI~~~g~~~~~a~~-- 171 (215)
T 3ve9_A 106 SMSHPGWNDAFYPYLREVARRVNPKGFVAPA----------TRPSMISRVKGDFP-D-KLVISPGVGTQGAKPGIALC-- 171 (215)
T ss_dssp CCSSTTCCGGGHHHHHHHHHHHCCSEEECCT----------TSHHHHHHHHHHCT-T-SEEEECCTTSTTCCTTHHHH--
T ss_pred ecCCcchHHHHHHHHHHHHHHcCCCceeeCC----------CCHHHHHHHHHhCC-C-cEEEcCCCCcCcCCHHHHHH--
Confidence 5432211 34577899999999999887632 23456788898887 5 67888999631 14555554
Q ss_pred CCcCeeeecHHHHhCCCchHHH
Q 009196 397 PELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 397 ~gaDgVMIGRgaL~nPwif~ei 418 (540)
.|+|.+.+||+.+..+.....+
T Consensus 172 ~Gad~iVvGr~I~~a~dp~~a~ 193 (215)
T 3ve9_A 172 HGADYEIVGRSVYQSADPVRKL 193 (215)
T ss_dssp TTCSEEEECHHHHTSSSHHHHH
T ss_pred cCCCEEEeCHHHcCCCCHHHHH
Confidence 6999999999999876554443
No 308
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.13 E-value=0.048 Score=54.74 Aligned_cols=76 Identities=11% Similarity=0.093 Sum_probs=61.9
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.+..++|+.++++|+++|.|-. -...+.| ..+++..+++.+ ++||+..+.|.++.++.+++. .|||+|.++-
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVlt--d~~~f~G--s~~~L~~ir~~v--~lPVl~Kdfi~d~~qi~ea~~--~GAD~VlLi~ 150 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLT--DTPSFQG--APEFLTAARQAC--SLPALRKDFLFDPYQVYEARS--WGADCILIIM 150 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC--CSTTTCC--CHHHHHHHHHTS--SSCEEEESCCCSTHHHHHHHH--TTCSEEEEET
T ss_pred CCHHHHHHHHHHCCCCEEEEec--cccccCC--CHHHHHHHHHhc--CCCEEECCccCCHHHHHHHHH--cCCCEEEEcc
Confidence 3578999999999999998752 2233333 567899999988 799999999999999999876 7999999987
Q ss_pred HHHh
Q 009196 407 GALI 410 (540)
Q Consensus 407 gaL~ 410 (540)
.+|.
T Consensus 151 a~L~ 154 (272)
T 3tsm_A 151 ASVD 154 (272)
T ss_dssp TTSC
T ss_pred cccC
Confidence 7763
No 309
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=95.12 E-value=0.2 Score=50.37 Aligned_cols=131 Identities=12% Similarity=0.045 Sum_probs=83.4
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~ 328 (540)
-|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+-. .+..+
T Consensus 19 iD~~~l~~lv~~li-~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~---~~t~~ 84 (291)
T 3a5f_A 19 VDFDKLSELIEWHI-KSKTDAIIVCG----------TTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS---NNTAA 84 (291)
T ss_dssp BCHHHHHHHHHHHH-HTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC---SSHHH
T ss_pred cCHHHHHHHHHHHH-HcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc---ccHHH
Confidence 45677888888776 57999998863 122222223333345555555544 5799885543 35678
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcC---HHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCc
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLAD---WDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~ad---w~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~ga 399 (540)
++++++.++++|+|++.+.. ..|.++.+ +++.+.|++++ ++||+. | |--.+++.+.++.+ ++++
T Consensus 85 ai~la~~a~~~Gadavlv~~----P~y~~~s~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pni 157 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVIT----PYYNKTTQKGLVKHFKAVSDAV--STPIIIYNVPGRTGLNITPGTLKELCE-DKNI 157 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHC-CTGGGC--CSCEEEEECHHHHSCCCCHHHHHHHTT-STTE
T ss_pred HHHHHHHHHhcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCCCCCHHHHHHHHc-CCCE
Confidence 99999999999999998853 23433322 45566777777 588764 5 55568888877543 3555
Q ss_pred Cee
Q 009196 400 ASC 402 (540)
Q Consensus 400 DgV 402 (540)
-||
T Consensus 158 vgi 160 (291)
T 3a5f_A 158 VAV 160 (291)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 310
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=95.10 E-value=0.68 Score=45.13 Aligned_cols=179 Identities=15% Similarity=0.133 Sum_probs=100.3
Q ss_pred CCCCCCHHHHHHHHHhCCCEEEeccceechhccC-ChhhhhhhhcccCCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEE
Q 009196 194 LTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQG-QASEWALLRRHSSEDLFGVQICGAYPDTLARTVELIDQQCTVDFI 272 (540)
Q Consensus 194 M~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g-~~~e~~ll~~~~~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~I 272 (540)
.+|+++.---..+ +.|||++ .++....--+. ....-+.+.......++.+.++-+ +++... .+. .+++|.|
T Consensus 25 ICGit~~ed~~a~-~~gaD~i--GfIf~~~SpR~V~~~~A~~i~~~~~~~~~~v~v~v~-~~ei~~---~i~-~~~ld~v 96 (228)
T 4aaj_A 25 ICGIKSLEELEIV-EKHADAT--GVVVNSNSKRRIPLEKAREIIENSAIPVFLVSTMVG-FSEWAM---AIE-RTGAQYI 96 (228)
T ss_dssp ECCCCSHHHHHHH-HTTCSEE--EEECSSSSTTBCCHHHHHHHHHHCSSCEEEEECCCC-HHHHHH---HHH-HHTCSEE
T ss_pred ECCCCcHHHHHHH-HcCCCEE--EEEecCCCCCCCCHHHHHHHHHhhCCCCEEEeccCc-hHHHHH---HHH-hccchhe
Confidence 3566664433444 5799865 34443221111 111111122222334566666654 554433 344 5689999
Q ss_pred EecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCC--ChhHHHHHHHHHHHcCCcEEEEeccc
Q 009196 273 DINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFE--GKNRIDSLIADIGTWGASAVTVHGRT 350 (540)
Q Consensus 273 DIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e--~~~~~~~la~~leeaGvdaItVHgRt 350 (540)
.||.. ..|+.+.+ +++..++||.=-+|..... ...+...+...+....+|++.+-..
T Consensus 97 QLHG~----------------E~~~~~~~----l~~~~~~~viKa~~v~~~~~~~~~~~~~~~~~~~~~~~d~~LlDs~- 155 (228)
T 4aaj_A 97 QVHSN----------------ALPQTIDT----LKKEFGVFVMKAFRVPTISKNPEEDANRLLSEISRYNADMVLLDTG- 155 (228)
T ss_dssp EECSC----------------CCHHHHHH----HHHHHCCEEEEEEECCSSCSCHHHHHHHHHHHHHHSCCSEEEEEC--
T ss_pred ecccc----------------cCHHHHHH----HhhccCceEEEEEEecccccchhhhHHHHHHHHhccCCCEEccCCC-
Confidence 99821 24554443 3444466664334543221 1234555566677788999988642
Q ss_pred ccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 351 RQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 351 r~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
++.....||+.+..+... .|+|..||+ +++.+.+++.. .+..||=|..|.=
T Consensus 156 --GGtG~~fDW~~~~~~~~~----~p~iLAGGL-~peNV~~Ai~~-~~P~gVDVsSGVE 206 (228)
T 4aaj_A 156 --AGSGKLHDLRVSSLVARK----IPVIVAGGL-NAENVEEVIKV-VKPYGVDVSSGVE 206 (228)
T ss_dssp --------CCCHHHHHHHHH----SCEEEESSC-CTTTHHHHHHH-HCCSEEEESGGGE
T ss_pred --CCCcCcCChHHHHHhhhc----CCeEEECCC-CHHHHHHHHHH-hCCCEEEeCCCCC
Confidence 222234699988887663 689999999 78888887775 5778888887764
No 311
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=95.10 E-value=0.46 Score=48.31 Aligned_cols=131 Identities=15% Similarity=0.085 Sum_probs=87.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 42 D~~~l~~lv~~li-~~Gv~Gl~v~Gt--------TGE~~~L--s~~Er~~v~~~~v~~~~grvpViaGvg~---~st~ea 107 (314)
T 3qze_A 42 DWDSLAKLVDFHL-QEGTNAIVAVGT--------TGESATL--DVEEHIQVIRRVVDQVKGRIPVIAGTGA---NSTREA 107 (314)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEESSG--------GGTGGGC--CHHHHHHHHHHHHHHHTTSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccChhhC--CHHHHHHHHHHHHHHhCCCCcEEEeCCC---cCHHHH
Confidence 5678888888776 569999988631 1222222 3333345555555544 5799884432 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -.++++.|++++ ++||+. | |--.+++.+.++.+ ++++-
T Consensus 108 i~la~~A~~~Gadavlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pnIv 180 (314)
T 3qze_A 108 VALTEAAKSGGADACLLVT----PYYNKPTQEGMYQHFRHIAEAV--AIPQILYNVPGRTSCDMLPETVERLSK-VPNII 180 (314)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHS--CSCEEEEECHHHHSCCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHHcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCccccCCCCCHHHHHHHhc-CCCEE
Confidence 9999999999999998853 2233332 267888999988 688874 4 66678888888654 46665
Q ss_pred eee
Q 009196 401 SCM 403 (540)
Q Consensus 401 gVM 403 (540)
||=
T Consensus 181 giK 183 (314)
T 3qze_A 181 GIK 183 (314)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 312
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=95.09 E-value=0.092 Score=54.68 Aligned_cols=122 Identities=11% Similarity=0.121 Sum_probs=90.4
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+++++.+.|+.+. ..||..|-|..| | ..+. +.|+++++++ ++.+.|-..-+|+ ..++
T Consensus 160 ~~~~~~~~~a~~~~-~~G~~~~KiKvg-~-------------~~d~----~~v~avr~a~~~~~l~vDaN~~~~--~~~a 218 (386)
T 1wue_A 160 EDLPQLLKQVQLAV-EKGYQRVKLKIR-P-------------GYDV----EPVALIRQHFPNLPLMVDANSAYT--LADL 218 (386)
T ss_dssp SCHHHHHHHHHHHH-HTTCSCEEEECB-T-------------TBSH----HHHHHHHHHCTTSCEEEECTTCCC--GGGH
T ss_pred CCHHHHHHHHHHHH-HhhhheEEEeeC-c-------------HHHH----HHHHHHHHhCCCCeEEEeCCCCCC--HHHH
Confidence 46888887777665 459999998754 1 1233 4456666655 5667777777774 3557
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++++.|++.++.+| +|.. .+.||+..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|++=
T Consensus 219 -~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~-~a~d~i~ik 282 (386)
T 1wue_A 219 -PQLQRLDHYQLAMI-------EQPF-AADDFLDHAQLQREL--KTRICLDENIRSLKDCQVALAL-GSCRSINLK 282 (386)
T ss_dssp -HHHHGGGGSCCSCE-------ECCS-CTTCSHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHH-TCCSEEEEC
T ss_pred -HHHHHHHhCCCeEE-------eCCC-CcccHHHHHHHHHhc--CCCEEeCCccCCHHHHHHHHHc-CCCCEEEEc
Confidence 88999999888876 3443 345788889999887 6999999899999999999886 679998874
No 313
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=95.07 E-value=0.21 Score=52.21 Aligned_cols=132 Identities=12% Similarity=0.121 Sum_probs=94.9
Q ss_pred eEEEEecCCc-HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecC
Q 009196 243 LFGVQICGAY-PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~-p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~ 320 (540)
|+...+...+ ++.+++.++.+. +.||..|-|..| | + .+. +.|+++++++ ++.+.|-.--
T Consensus 139 ~~~~~~~~~~~~e~~~~~~~~~~-~~G~~~~K~Kv~-~---------~----~d~----~~v~avR~~~~~~~l~vDaN~ 199 (388)
T 3qld_A 139 EVSATLGMSESLDVLIQSVDAAV-EQGFRRVKLKIA-P---------G----RDR----AAIKAVRLRYPDLAIAADANG 199 (388)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHH-HTTCSEEEEECB-T---------T----BSH----HHHHHHHHHCTTSEEEEECTT
T ss_pred EEeEEecCCCCHHHHHHHHHHHH-HhCCCeEEEEeC-c---------H----HHH----HHHHHHHHHCCCCeEEEECCC
Confidence 4444555444 899988888766 469999999764 1 1 233 4566666665 5567776667
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+|+ ..++.. ++.|++.++.+| +|.. .+.|++..+++++.+ ++||.+.=.+.+..++.++++. ..+|
T Consensus 200 ~~~--~~~A~~-~~~l~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~-~a~d 265 (388)
T 3qld_A 200 SYR--PEDAPV-LRQLDAYDLQFI-------EQPL-PEDDWFDLAKLQASL--RTPVCLDESVRSVRELKLTARL-GAAR 265 (388)
T ss_dssp CCC--GGGHHH-HHHGGGGCCSCE-------ECCS-CTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHH-TCCS
T ss_pred CCC--hHHHHH-HHHHhhCCCcEE-------ECCC-CcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHc-CCCC
Confidence 775 345665 788888887766 3443 345788899999988 6999998899999999998886 6789
Q ss_pred eeeecHH
Q 009196 401 SCMIARG 407 (540)
Q Consensus 401 gVMIGRg 407 (540)
.|++==+
T Consensus 266 ~v~~k~~ 272 (388)
T 3qld_A 266 VLNVKPG 272 (388)
T ss_dssp EEEECHH
T ss_pred EEEECch
Confidence 9887533
No 314
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=95.06 E-value=0.046 Score=54.78 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.+..++|+.+++.|+++|.|. |-...+.| ..+++..+++.+ ++||+..+-|.+..++.+++. .|||+|.++-
T Consensus 72 ~~p~~~A~~y~~~GA~~isvl--td~~~f~G--s~~~l~~ir~~v--~lPvl~kdfiid~~qv~~A~~--~GAD~VlLi~ 143 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVV--TEQRRFQG--SLDDLDAVRASV--SIPVLRKDFVVQPYQIHEARA--HGADMLLLIV 143 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEE--CCGGGHHH--HHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHH--TTCSEEEEEG
T ss_pred CCHHHHHHHHHHcCCCEEEEe--cChhhcCC--CHHHHHHHHHhC--CCCEEECccccCHHHHHHHHH--cCCCEEEEec
Confidence 457889999999999999986 22222333 356889999988 799999999999988888876 7999999987
Q ss_pred HHHhCC
Q 009196 407 GALIKP 412 (540)
Q Consensus 407 gaL~nP 412 (540)
+.|.+.
T Consensus 144 a~l~~~ 149 (272)
T 3qja_A 144 AALEQS 149 (272)
T ss_dssp GGSCHH
T ss_pred ccCCHH
Confidence 777543
No 315
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.02 E-value=0.078 Score=54.07 Aligned_cols=153 Identities=12% Similarity=0.072 Sum_probs=88.8
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~lee 338 (540)
.|+++. ++|||.|=+--. ....+ .|+-....-..+.+...+++|.+.+++||++-+-.|+- +..++.+.++.+.+
T Consensus 41 sA~l~e-~aG~dai~vs~~-s~a~~--~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d~Gyg-~~~~v~~~v~~l~~ 115 (305)
T 3ih1_A 41 AALVAR-NTGFLALYLSGA-AYTAS--KGLPDLGIVTSTEVAERARDLVRATDLPVLVDIDTGFG-GVLNVARTAVEMVE 115 (305)
T ss_dssp HHHHHH-HTTCSCEEECHH-HHHHH--HTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECTTCSS-SHHHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEECcH-HHHHh--CCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECCCCCC-CHHHHHHHHHHHHH
Confidence 344454 689999877420 11111 13333333455666777788877788999999999974 45678888999999
Q ss_pred cCCcEEEEecccccCc--cC-C--CcC----HHHHHHHHHHcCCCceEEEeCCCCC---H----HHHHHHHhcCCCcCee
Q 009196 339 WGASAVTVHGRTRQQR--YS-K--LAD----WDYIYQCARKASDDLQVLGNGDIYS---Y----LDWNKHKSDCPELASC 402 (540)
Q Consensus 339 aGvdaItVHgRtr~q~--y~-g--~ad----w~~I~~i~~~~~~~IPVIgNGdI~s---~----eDa~~~l~~~~gaDgV 402 (540)
+|+++|.|-+.....+ .. + ... .+.|+.++++-+ ++-|++=-|-.. . +++..+. + .|||+|
T Consensus 116 aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~-~~~I~ARtda~~~~g~~~ai~Ra~ay~-e-AGAD~i 192 (305)
T 3ih1_A 116 AKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAP-SLYIVARTDARGVEGLDEAIERANAYV-K-AGADAI 192 (305)
T ss_dssp TTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCT-TSEEEEEECCHHHHCHHHHHHHHHHHH-H-HTCSEE
T ss_pred hCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCC-CeEEEEeeccccccCHHHHHHHHHHHH-H-cCCCEE
Confidence 9999999987642211 11 1 112 234444444421 344444444331 2 2233333 3 799999
Q ss_pred eecHHHHhCCCchHHHHhc
Q 009196 403 MIARGALIKPWIFTEIKEQ 421 (540)
Q Consensus 403 MIGRgaL~nPwif~eik~~ 421 (540)
++= .+.++..+.++.+.
T Consensus 193 ~~e--~~~~~~~~~~i~~~ 209 (305)
T 3ih1_A 193 FPE--ALQSEEEFRLFNSK 209 (305)
T ss_dssp EET--TCCSHHHHHHHHHH
T ss_pred EEc--CCCCHHHHHHHHHH
Confidence 983 12344555565543
No 316
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.02 E-value=0.52 Score=45.75 Aligned_cols=119 Identities=8% Similarity=0.028 Sum_probs=78.7
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCC---hhH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEG---KNR 328 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~---~~~ 328 (540)
++..+.+.|+.+. ++|+.+|.++ + .+-++.+++.+++||.-..|..+.+. ...
T Consensus 34 ~~~~~~~~A~a~~-~~Ga~~i~~~--------------~---------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~ 89 (229)
T 3q58_A 34 KPEIVAAMAQAAA-SAGAVAVRIE--------------G---------IENLRTVRPHLSVPIIGIIKRDLTGSPVRITP 89 (229)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEE--------------S---------HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSC
T ss_pred CcchHHHHHHHHH-HCCCcEEEEC--------------C---------HHHHHHHHHhcCCCEEEEEeecCCCCceEeCc
Confidence 3677888887776 7899999873 1 24578889999999874444322110 011
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
..+-+..+.++|+|.|.+....+. .+....+++..+++. .+++++ ++.+.+++..+.+ .|+|.|.+
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~---~p~~l~~~i~~~~~~---g~~v~~--~v~t~eea~~a~~--~Gad~Ig~ 155 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRS---RPVDIDSLLTRIRLH---GLLAMA--DCSTVNEGISCHQ--KGIEFIGT 155 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSC---CSSCHHHHHHHHHHT---TCEEEE--ECSSHHHHHHHHH--TTCSEEEC
T ss_pred cHHHHHHHHHcCCCEEEECccccC---ChHHHHHHHHHHHHC---CCEEEE--ecCCHHHHHHHHh--CCCCEEEe
Confidence 223356678899999988653221 111223567777653 477765 7999999998776 79999964
No 317
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.99 E-value=0.26 Score=50.09 Aligned_cols=134 Identities=10% Similarity=0.016 Sum_probs=86.2
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~ 330 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+ |- .+..+++
T Consensus 27 D~~~l~~lv~~li-~~Gv~Gl~v~Gt--------TGE~~~L--t~~Er~~v~~~~v~~~grvpViaGv--g~-~~t~~ai 92 (313)
T 3dz1_A 27 DDVSIDRLTDFYA-EVGCEGVTVLGI--------LGEAPKL--DAAEAEAVATRFIKRAKSMQVIVGV--SA-PGFAAMR 92 (313)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESTG--------GGTGGGS--CHHHHHHHHHHHHHHCTTSEEEEEC--CC-SSHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEeCcc--------CcChhhC--CHHHHHHHHHHHHHHcCCCcEEEec--CC-CCHHHHH
Confidence 5678888888887 579999987631 1222222 2333344555554444 67888854 32 3567899
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCC--cCHHHHHHHHHHcCCCceEEE------eCCCCCHHHHHHHHhcCCCcCee
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKL--ADWDYIYQCARKASDDLQVLG------NGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~--adw~~I~~i~~~~~~~IPVIg------NGdI~s~eDa~~~l~~~~gaDgV 402 (540)
++++.++++|+|++.+.. .. |... .-+++++.|+++++.++|||. .|--.+++.+.++.++++++-||
T Consensus 93 ~la~~A~~~Gadavlv~~--P~--~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgi 168 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIAP--PP--SLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVML 168 (313)
T ss_dssp HHHHHHHHHTCSEEEECC--CT--TCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSEEEE
T ss_pred HHHHHHHHcCCCEEEECC--CC--CCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCEEEE
Confidence 999999999999998842 11 2211 126788899998831289875 36556888888865434555554
Q ss_pred e
Q 009196 403 M 403 (540)
Q Consensus 403 M 403 (540)
=
T Consensus 169 K 169 (313)
T 3dz1_A 169 K 169 (313)
T ss_dssp E
T ss_pred E
Confidence 3
No 318
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=94.98 E-value=0.43 Score=49.29 Aligned_cols=123 Identities=7% Similarity=0.066 Sum_probs=91.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
+++++.+.|+.+. ..||..|-+..|- +++.-.+.|+++++++ ++.+.|..--+|+ ..++
T Consensus 144 ~~~~~~~~a~~~~-~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~--~~~a 204 (372)
T 3cyj_A 144 PLRRLQEQLGGWA-AAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDANGAYT--RKQA 204 (372)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSC--HHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HHHH
Confidence 4566776666655 4599999986541 3455567777887776 4667777777773 5788
Q ss_pred HHHHHHHHHc-CCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTW-GASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leea-GvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.++++.|++. ++.+| +|.. .+.||+..+++++.++.++||.+.=.+.+..++.++ . ..+|.|.+
T Consensus 205 ~~~~~~l~~~~~i~~i-------EqP~-~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~-~--~a~d~i~i 269 (372)
T 3cyj_A 205 LYWAGAFAREAGISYL-------EEPV-SSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL-A--GCVDILQA 269 (372)
T ss_dssp HHHHHHHHHHHCCCEE-------ECSS-CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH-H--TTCSEEEE
T ss_pred HHHHHHHHhhcCCcEE-------ECCC-CcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH-h--CCCCEEec
Confidence 9999999998 88876 3443 345899999999988311799999999999999886 4 67899886
No 319
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.94 E-value=0.67 Score=46.53 Aligned_cols=133 Identities=14% Similarity=0.059 Sum_probs=88.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 22 D~~~l~~lv~~li-~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~---~~t~~a 87 (294)
T 3b4u_A 22 DIDAMIAHARRCL-SNGCDSVTLFG----------TTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV---DSIEDA 87 (294)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEESS----------TTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC---ccHHHH
Confidence 5677888888877 57999998863 122222223444456666666655 5799886543 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCC-Cc---CHHHHHHHHHHcC-CCceEEE-e-----CCCCCHHHHHHHHhcCCC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSK-LA---DWDYIYQCARKAS-DDLQVLG-N-----GDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g-~a---dw~~I~~i~~~~~-~~IPVIg-N-----GdI~s~eDa~~~l~~~~g 398 (540)
+++++.++++|+|++.+.. ..|.+ +. -+++...|++++| .++|||. | |--.+++.+.++..++++
T Consensus 88 i~la~~A~~~Gadavlv~~----P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn 163 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAP----PSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPG 163 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC----CCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTT
T ss_pred HHHHHHHHhcCCCEEEEcC----CcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCC
Confidence 9999999999999998853 23433 32 2567788888872 0278764 5 544688888886513466
Q ss_pred -cCee
Q 009196 399 -LASC 402 (540)
Q Consensus 399 -aDgV 402 (540)
+-||
T Consensus 164 ~ivgi 168 (294)
T 3b4u_A 164 IVTGV 168 (294)
T ss_dssp TEEEE
T ss_pred cEEEE
Confidence 5555
No 320
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=94.90 E-value=0.24 Score=49.72 Aligned_cols=130 Identities=12% Similarity=0.056 Sum_probs=84.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+.. .+..++
T Consensus 20 D~~~l~~lv~~li-~~Gv~gl~~~Gt--------tGE~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~---~~t~~a 85 (292)
T 2ojp_A 20 CRASLKKLIDYHV-ASGTSAIVSVGT--------TGESATL--NHDEHADVVMMTLDLADGRIPVIAGTGA---NATAEA 85 (292)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEESST--------TTTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccchhhC--CHHHHHHHHHHHHHHhCCCCcEEEecCC---ccHHHH
Confidence 5677888888776 469999988631 1222222 3333345566555544 5798885533 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -+++.+.|++++ ++||+. | |--.+++.+.++.+ ++++-
T Consensus 86 i~la~~a~~~Gadavlv~~----P~y~~~s~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pniv 158 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT----PYYNRPSQEGLYQHFKAIAEHT--DLPQILYNVPSRTGCDLLPETVGRLAK-VKNII 158 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC----CCSSCCCHHHHHHHHHHHHTTC--SSCEEEECCHHHHSCCCCHHHHHHHHT-STTEE
T ss_pred HHHHHHHHhcCCCEEEECC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeCcchhccCCCHHHHHHHHc-CCCEE
Confidence 9999999999999998853 2343332 256778888877 688774 4 44458888887553 35444
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 159 gi 160 (292)
T 2ojp_A 159 GI 160 (292)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 321
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=94.89 E-value=0.55 Score=47.06 Aligned_cols=133 Identities=17% Similarity=0.086 Sum_probs=88.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 20 D~~~l~~lv~~li-~~Gv~gl~~~Gt--------tGE~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~---~~t~~a 85 (291)
T 3tak_A 20 DWKSLEKLVEWHI-EQGTNSIVAVGT--------TGEASTL--SMEEHTQVIKEIIRVANKRIPIIAGTGA---NSTREA 85 (291)
T ss_dssp CHHHHHHHHHHHH-HHTCCEEEESST--------TTTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCC---SSHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECcc--------ccccccC--CHHHHHHHHHHHHHHhCCCCeEEEeCCC---CCHHHH
Confidence 5677888888776 569999977631 1222222 3333345566555544 5799885432 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -.++++.|++.+ ++||+ .| |--.+++.+.++. +++++-
T Consensus 86 i~la~~a~~~Gadavlv~~----P~y~~~~~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La-~~pniv 158 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT----PYYNKPTQEGLYQHYKAIAEAV--ELPLILYNVPGRTGVDLSNDTAVRLA-EIPNIV 158 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC----CCSSCCCHHHHHHHHHHHHHHC--CSCEEEEECHHHHSCCCCHHHHHHHT-TSTTEE
T ss_pred HHHHHHHHhcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHhc--CCCEEEEecccccCCCCCHHHHHHHH-cCCCEE
Confidence 9999999999999998853 2233322 267888999988 68887 43 5566888888865 446666
Q ss_pred eeeec
Q 009196 401 SCMIA 405 (540)
Q Consensus 401 gVMIG 405 (540)
||=-+
T Consensus 159 giK~s 163 (291)
T 3tak_A 159 GIKDA 163 (291)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 65433
No 322
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.76 E-value=0.97 Score=43.90 Aligned_cols=118 Identities=17% Similarity=0.112 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCC---hhHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEG---KNRI 329 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~---~~~~ 329 (540)
+..+.+.|+.+. ++|+.+|.++ + .+.++.+++.+++||.-.+|..+.+. ....
T Consensus 35 ~~~~~~~A~a~~-~~Ga~~i~~~--------------~---------~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~ 90 (232)
T 3igs_A 35 PEIVAAMALAAE-QAGAVAVRIE--------------G---------IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPF 90 (232)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEEE--------------S---------HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCS
T ss_pred cchHHHHHHHHH-HCCCeEEEEC--------------C---------HHHHHHHHHhcCCCEEEEEeecCCCcceEeCcc
Confidence 677888887776 7899999873 1 25678888999999853334321110 0112
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.+-+..+.++|+|.|.+....+. .+....+++..+++. .+++++ ++.+.+++..+.+ .|+|.|.+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~---~p~~l~~~i~~~~~~---g~~v~~--~v~t~eea~~a~~--~Gad~Ig~ 155 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQ---RPVAVEALLARIHHH---HLLTMA--DCSSVDDGLACQR--LGADIIGT 155 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSC---CSSCHHHHHHHHHHT---TCEEEE--ECCSHHHHHHHHH--TTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccC---CHHHHHHHHHHHHHC---CCEEEE--eCCCHHHHHHHHh--CCCCEEEE
Confidence 23356678899999988653221 111223566777653 467765 7999999998776 79999864
No 323
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=94.67 E-value=0.26 Score=47.40 Aligned_cols=138 Identities=13% Similarity=0.086 Sum_probs=80.1
Q ss_pred CCeEEEEec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEec
Q 009196 241 EDLFGVQIC-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR 319 (540)
Q Consensus 241 e~p~~vQL~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR 319 (540)
+.++++=+- +--+.....+++.+. ++|+|.|.+|.- .|. +-+..+++... ..-+.|-+.
T Consensus 58 ~~~v~lD~K~~DI~nT~~~~v~~~~-~~GaD~vTvh~~----------~G~------~~l~~~~~~~~---~~~~~V~~l 117 (213)
T 1vqt_A 58 NLKIILDLKFCDIPSTVERSIKSWD-HPAIIGFTVHSC----------AGY------ESVERALSATD---KHVFVVVKL 117 (213)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHC-CTTEEEEEEEGG----------GCH------HHHHHHHHHCS---SEEEEECCC
T ss_pred CCCEEEEeecccCchHHHHHHHHHH-HCCCCEEEEecc----------CCH------HHHHHHHHhcC---CCeEEEEEe
Confidence 455655553 233566666777776 689999999841 121 22333333322 112333333
Q ss_pred CCCCCCh-hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHH---H------H
Q 009196 320 TGYFEGK-NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYL---D------W 389 (540)
Q Consensus 320 ~G~~e~~-~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~e---D------a 389 (540)
++..... +.+..+++. .+.|++ +...+ +.+..+++.++ .| +..|||.--. | .
T Consensus 118 ts~~~~l~~~v~~~a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~--~~-~v~pGI~~~~~~~dq~rv~t~ 179 (213)
T 1vqt_A 118 TSMEGSLEDYMDRIEKL-NKLGCD-FVLPG-------------PWAKALREKIK--GK-ILVPGIRMEVKADDQKDVVTL 179 (213)
T ss_dssp TTSCCCHHHHHHHHHHH-HHHTCE-EECCH-------------HHHHHHTTTCC--SC-EEECCBC---------CCBCH
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCE-EEEcH-------------HHHHHHHHHCC--CC-EEECCCCCCCCccchhhcCCH
Confidence 3332222 456677888 999999 44321 45677777774 46 7778885322 1 4
Q ss_pred HHHHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 390 NKHKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 390 ~~~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
.+ ++ .|+|++.+||+.+..+.-...++
T Consensus 180 ~~-i~--aGad~iVvGR~I~~a~dP~~aa~ 206 (213)
T 1vqt_A 180 EE-MK--GIANFAVLGREIYLSENPREKIK 206 (213)
T ss_dssp HH-HT--TTCSEEEESHHHHTSSCHHHHHH
T ss_pred HH-HH--CCCCEEEEChhhcCCCCHHHHHH
Confidence 55 54 79999999999998776544443
No 324
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.66 E-value=0.2 Score=50.10 Aligned_cols=109 Identities=14% Similarity=0.147 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSL 332 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~l 332 (540)
++...+-|+... +.|+|.||||++.+ ....++++..+|+++++.+++||+|-..- .++
T Consensus 33 ~~~a~~~a~~~v-~~GAdiIDIg~~s~------------~~eE~~rv~~vi~~l~~~~~~pisIDT~~---------~~v 90 (271)
T 2yci_X 33 PRPIQEWARRQA-EKGAHYLDVNTGPT------------ADDPVRVMEWLVKTIQEVVDLPCCLDSTN---------PDA 90 (271)
T ss_dssp CHHHHHHHHHHH-HTTCSEEEEECCSC------------SSCHHHHHHHHHHHHHHHCCCCEEEECSC---------HHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEEcCCcC------------chhHHHHHHHHHHHHHHhCCCeEEEeCCC---------HHH
Confidence 345555555555 57999999997663 23467889999999998889999995431 244
Q ss_pred HHHHHHc--CCcEEE-EecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC-----CCCCHHHHHHHH
Q 009196 333 IADIGTW--GASAVT-VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG-----DIYSYLDWNKHK 393 (540)
Q Consensus 333 a~~leea--GvdaIt-VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG-----dI~s~eDa~~~l 393 (540)
++...++ |++.|. |++-. .+|+.+..+.... +.|||+.- .-.+.++..+.+
T Consensus 91 ~~aal~a~~Ga~iINdvs~~~--------d~~~~~~~~~a~~--~~~vv~m~~d~~G~p~t~~~~~~~l 149 (271)
T 2yci_X 91 IEAGLKVHRGHAMINSTSADQ--------WKMDIFFPMAKKY--EAAIIGLTMNEKGVPKDANDRSQLA 149 (271)
T ss_dssp HHHHHHHCCSCCEEEEECSCH--------HHHHHHHHHHHHH--TCEEEEESCBTTBCCCSHHHHHHHH
T ss_pred HHHHHHhCCCCCEEEECCCCc--------cccHHHHHHHHHc--CCCEEEEecCCCCCCCCHHHHHHHH
Confidence 5555556 999886 65421 1234455555556 57888733 334544444433
No 325
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=94.65 E-value=0.33 Score=48.99 Aligned_cols=130 Identities=14% Similarity=0.091 Sum_probs=84.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. +.|-+..| ..+.-.++++.+.+.+ .+||.+-+-. .+..++
T Consensus 23 D~~~l~~lv~~li-~~Gv~gl~v~G--------ttGE~~~L--s~~Er~~v~~~~~~~~~grvpviaGvg~---~~t~~a 88 (300)
T 3eb2_A 23 RADVMGRLCDDLI-QAGVHGLTPLG--------STGEFAYL--GTAQREAVVRATIEAAQRRVPVVAGVAS---TSVADA 88 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSCBBTTS--------GGGTGGGC--CHHHHHHHHHHHHHHHTTSSCBEEEEEE---SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc--------cccCcccc--CHHHHHHHHHHHHHHhCCCCcEEEeCCC---CCHHHH
Confidence 5678888888877 57999986652 11222222 3333345566655554 5799886543 256789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaD 400 (540)
+++++.++++|+|++.+.. ..|.++. -.++++.|++++ ++||| .| |--.+++.+.++. +++++-
T Consensus 89 i~la~~a~~~Gadavlv~~----P~y~~~~~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La-~~pnIv 161 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAIL----EAYFPLKDAQIESYFRAIADAV--EIPVVIYTNPQFQRSDLTLDVIARLA-EHPRIR 161 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEE----CCSSCCCHHHHHHHHHHHHHHC--SSCEEEEECTTTCSSCCCHHHHHHHH-TSTTEE
T ss_pred HHHHHHHHHcCCCEEEEcC----CCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECccccCCCCCHHHHHHHH-cCCCEE
Confidence 9999999999999998853 2233322 257888899988 58876 44 4345788777754 445555
Q ss_pred ee
Q 009196 401 SC 402 (540)
Q Consensus 401 gV 402 (540)
||
T Consensus 162 gi 163 (300)
T 3eb2_A 162 YI 163 (300)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 326
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=94.61 E-value=0.58 Score=47.34 Aligned_cols=131 Identities=11% Similarity=0.069 Sum_probs=86.7
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+ |. .+..++
T Consensus 33 D~~~l~~lv~~li-~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g~-~~t~~a 98 (307)
T 3s5o_A 33 DYGKLEENLHKLG-TFPFRGFVVQG----------SNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGS--GC-ESTQAT 98 (307)
T ss_dssp CHHHHHHHHHHHT-TSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHcCCCCcEEEec--CC-CCHHHH
Confidence 5677888888776 67999998863 122222223444456666666655 57888854 32 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCC--C---cCHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSK--L---ADWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g--~---adw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~g 398 (540)
+++++.++++|+|++.+.. ..|-+ + .-+++++.|++.+ ++||| .| |--.+++.+.++.+ +++
T Consensus 99 i~la~~A~~~Gadavlv~~----P~y~~~~~s~~~l~~~f~~ia~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pn 171 (307)
T 3s5o_A 99 VEMTVSMAQVGADAAMVVT----PCYYRGRMSSAALIHHYTKVADLS--PIPVVLYSVPANTGLDLPVDAVVTLSQ-HPN 171 (307)
T ss_dssp HHHHHHHHHTTCSEEEEEC----CCTTGGGCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHHHHT-STT
T ss_pred HHHHHHHHHcCCCEEEEcC----CCcCCCCCCHHHHHHHHHHHHhhc--CCCEEEEeCCcccCCCCCHHHHHHHhc-CCC
Confidence 9999999999999998852 22322 1 2367888898888 68876 44 44458888877554 466
Q ss_pred cCeee
Q 009196 399 LASCM 403 (540)
Q Consensus 399 aDgVM 403 (540)
+-||=
T Consensus 172 IvgiK 176 (307)
T 3s5o_A 172 IVGMX 176 (307)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55553
No 327
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=94.61 E-value=0.7 Score=47.05 Aligned_cols=132 Identities=17% Similarity=0.107 Sum_probs=85.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++. +.|-+..| ..+.-.++++.+.+.+ .+||.+-+ |- .+..++
T Consensus 30 D~~~l~~lv~~li-~~Gv~gl~v~G--------tTGE~~~L--s~~Er~~v~~~~~~~~~grvpviaGv--g~-~~t~~a 95 (318)
T 3qfe_A 30 DLASQERYYAYLA-RSGLTGLVILG--------TNAEAFLL--TREERAQLIATARKAVGPDFPIMAGV--GA-HSTRQV 95 (318)
T ss_dssp CHHHHHHHHHHHH-TTTCSEEEESS--------GGGTGGGS--CHHHHHHHHHHHHHHHCTTSCEEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCc--------cccChhhC--CHHHHHHHHHHHHHHhCCCCcEEEeC--CC-CCHHHH
Confidence 5677888888887 67999998863 11222222 3333345666665554 57998854 32 356789
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCc----CHHHHHHHHHHcCCCceEEE-e------CCCCCHHHHHHHHhcCCC
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLA----DWDYIYQCARKASDDLQVLG-N------GDIYSYLDWNKHKSDCPE 398 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~a----dw~~I~~i~~~~~~~IPVIg-N------GdI~s~eDa~~~l~~~~g 398 (540)
+++++.++++|+|++.+.. .-.|.++. -+.+++.|++.+ ++||+. | |--.+++.+.++.+++++
T Consensus 96 i~la~~a~~~Gadavlv~~---P~y~~kp~~~~~l~~~f~~ia~a~--~lPiilYn~P~~t~g~~l~~~~~~~La~~~pn 170 (318)
T 3qfe_A 96 LEHINDASVAGANYVLVLP---PAYFGKATTPPVIKSFFDDVSCQS--PLPVVIYNFPGVCNGIDLDSDMITTIARKNPN 170 (318)
T ss_dssp HHHHHHHHHHTCSEEEECC---CCC---CCCHHHHHHHHHHHHHHC--SSCEEEEECCC----CCCCHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCCEEEEeC---CcccCCCCCHHHHHHHHHHHHhhC--CCCEEEEeCCcccCCCCCCHHHHHHHHhhCCC
Confidence 9999999999999998842 11222222 267888999988 688763 3 433678888886542466
Q ss_pred cCee
Q 009196 399 LASC 402 (540)
Q Consensus 399 aDgV 402 (540)
+-||
T Consensus 171 Ivgi 174 (318)
T 3qfe_A 171 VVGV 174 (318)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 328
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=94.60 E-value=0.55 Score=47.67 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=85.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+ |- .+..++
T Consensus 26 D~~~l~~lv~~li-~~Gv~Gl~v~Gt--------TGE~~~L--s~~Er~~v~~~~~~~~~grvpViaGv--g~-~~t~~a 91 (311)
T 3h5d_A 26 NFDAIPALIEHLL-AHHTDGILLAGT--------TAESPTL--THDEELELFAAVQKVVNGRVPLIAGV--GT-NDTRDS 91 (311)
T ss_dssp CTTHHHHHHHHHH-HTTCCCEEESST--------TTTGGGS--CHHHHHHHHHHHHHHSCSSSCEEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECcc--------ccChhhC--CHHHHHHHHHHHHHHhCCCCcEEEeC--CC-cCHHHH
Confidence 4567788888776 679999988731 1222222 3444455666666655 57999854 32 256789
Q ss_pred HHHHHHHHHcCC-cEEEEecccccCccCCCc---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCc
Q 009196 330 DSLIADIGTWGA-SAVTVHGRTRQQRYSKLA---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 330 ~~la~~leeaGv-daItVHgRtr~q~y~g~a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~ga 399 (540)
+++++.++++|+ |++.+.. ..|.++. -.++.+.|++++ ++||+ .| |--.+++.+.++.+ .+++
T Consensus 92 i~la~~A~~~Ga~davlv~~----P~y~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~La~-~pnI 164 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV----PYYNKPSQEGMYQHFKAIADAS--DLPIIIYNIPGRVVVELTPETMLRLAD-HPNI 164 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC----CCSSCCCHHHHHHHHHHHHHSC--SSCEEEEECHHHHSSCCCHHHHHHHHT-STTE
T ss_pred HHHHHHHHhcCCCcEEEEcC----CCCCCCCHHHHHHHHHHHHHhC--CCCEEEEecccccCCCCCHHHHHHHhc-CCCE
Confidence 999999999997 9998853 2233322 256788888887 68877 44 65568888887554 3555
Q ss_pred Cee
Q 009196 400 ASC 402 (540)
Q Consensus 400 DgV 402 (540)
-||
T Consensus 165 vgi 167 (311)
T 3h5d_A 165 IGV 167 (311)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 329
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=94.56 E-value=0.16 Score=52.15 Aligned_cols=153 Identities=9% Similarity=0.043 Sum_probs=89.9
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~lee 338 (540)
|+++. ++|||.|=+--. .... ...|+-...+-..+.+...+++|.+.+ ++||++-+-.|+- +..++.+.++++.+
T Consensus 52 A~i~e-~aGfdai~vs~~-~~a~-~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~v~~tv~~l~~ 127 (318)
T 1zlp_A 52 AAVVE-KTGFHAAFVSGY-SVSA-AMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLNVQRFIRELIS 127 (318)
T ss_dssp HHHHH-HTTCSEEEECHH-HHHH-HHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEECcH-HHhh-HhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHHHHHHHHHHHH
Confidence 34444 689999976320 1110 012333323445667778888888888 9999999999965 67788999999999
Q ss_pred cCCcEEEEecccccC--ccCC---CcC----HHHHHHHHHHcC-CCceEEEeCCCCCH-------HHHHHHHhcCCCcCe
Q 009196 339 WGASAVTVHGRTRQQ--RYSK---LAD----WDYIYQCARKAS-DDLQVLGNGDIYSY-------LDWNKHKSDCPELAS 401 (540)
Q Consensus 339 aGvdaItVHgRtr~q--~y~g---~ad----w~~I~~i~~~~~-~~IPVIgNGdI~s~-------eDa~~~l~~~~gaDg 401 (540)
+|+++|.|-+..... ...+ ... .+.|+.+++... .++-|++=-|-.-. +++.. +.+ .|||+
T Consensus 128 aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~A-y~e-AGAd~ 205 (318)
T 1zlp_A 128 AGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANL-YKE-AGADA 205 (318)
T ss_dssp TTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHH-HHH-TTCSE
T ss_pred cCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHH-HHH-cCCCE
Confidence 999999997754211 1111 111 234444444431 13445444444321 12223 334 79999
Q ss_pred eeecHHHHhCCCchHHHHh
Q 009196 402 CMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 402 VMIGRgaL~nPwif~eik~ 420 (540)
|++= + +.++..+.++.+
T Consensus 206 i~~e-~-~~~~e~~~~i~~ 222 (318)
T 1zlp_A 206 TFVE-A-PANVDELKEVSA 222 (318)
T ss_dssp EEEC-C-CCSHHHHHHHHH
T ss_pred EEEc-C-CCCHHHHHHHHH
Confidence 9884 1 334455666654
No 330
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.52 E-value=0.15 Score=53.27 Aligned_cols=98 Identities=7% Similarity=0.049 Sum_probs=68.2
Q ss_pred CchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 295 KPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 295 ~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
.++...+.++.+++.-.++|.+ -+|+.. ...+.++.+.++|++.|.|+.- +.+. ....+.|+++++..+ +
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga--~vg~~~---~~~~~~~~lieaGvd~I~idta---~G~~-~~~~~~I~~ik~~~p-~ 149 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGA--AVGAAP---GNEERVKALVEAGVDVLLIDSS---HGHS-EGVLQRIRETRAAYP-H 149 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEE--ECCSCT---TCHHHHHHHHHTTCSEEEEECS---CTTS-HHHHHHHHHHHHHCT-T
T ss_pred CHHHHHHHHHHHHhcCceeEEE--EeccCh---hHHHHHHHHHhCCCCEEEEeCC---CCCC-HHHHHHHHHHHHhcC-C
Confidence 4677777888887653344444 334322 3456788899999999998531 1111 122467888998886 6
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
+|||+ |.+.|++++.++.+ .|||+|.+|
T Consensus 150 v~Vi~-G~v~t~e~A~~a~~--aGAD~I~vG 177 (366)
T 4fo4_A 150 LEIIG-GNVATAEGARALIE--AGVSAVKVG 177 (366)
T ss_dssp CEEEE-EEECSHHHHHHHHH--HTCSEEEEC
T ss_pred CceEe-eeeCCHHHHHHHHH--cCCCEEEEe
Confidence 88876 77899999999765 799999995
No 331
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=94.46 E-value=0.16 Score=48.64 Aligned_cols=141 Identities=16% Similarity=0.114 Sum_probs=81.8
Q ss_pred EEEecCC-cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCC
Q 009196 245 GVQICGA-YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYF 323 (540)
Q Consensus 245 ~vQL~G~-~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~ 323 (540)
.+.|||- ++++...|+ ++|+|.|=+.+--+.+.. =.++.+.+|++.+...+ .+|.|=. +
T Consensus 3 ~vKICGit~~eda~~a~-----~~GaD~iGfif~~~SpR~----------V~~~~a~~i~~~~~~~~-~~VgVfv----n 62 (205)
T 1nsj_A 3 RVKICGITNLEDALFSV-----ESGADAVGFVFYPKSKRY----------ISPEDARRISVELPPFV-FRVGVFV----N 62 (205)
T ss_dssp EEEECCCCSHHHHHHHH-----HHTCSEEEEECCTTCTTB----------CCHHHHHHHHHHSCSSS-EEEEEES----S
T ss_pred cEEECCCCcHHHHHHHH-----HcCCCEEEEEecCCCCCc----------CCHHHHHHHHHhCCCCC-CEEEEEe----C
Confidence 4788985 455544333 458999999863223221 13566777766654321 1222211 1
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEeccc-------------------------------------------c-cCccCCCc
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRT-------------------------------------------R-QQRYSKLA 359 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRt-------------------------------------------r-~q~y~g~a 359 (540)
+ ...++...+...++|.|.+||-. . .++.....
T Consensus 63 ~---~~~~i~~~~~~~~ld~vQLHG~e~~~~~~~l~~~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~f 139 (205)
T 1nsj_A 63 E---EPEKILDVASYVQLNAVQLHGEEPIELCRKIAERILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTF 139 (205)
T ss_dssp C---CHHHHHHHHHHHTCSEEEECSCCCHHHHHHHHTTSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCC
T ss_pred C---CHHHHHHHHHhhCCCEEEECCCCCHHHHHHHhcCCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCcc
Confidence 1 23344555566677777777621 0 01111234
Q ss_pred CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 360 DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 360 dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
||+.+..+. .. +.|+|..||+ +++.+.+++.. .++.||=+..|.=..|-
T Consensus 140 dw~~l~~~~-~~--~~p~~LAGGL-~peNV~~ai~~-~~p~gVDvsSGvE~~pG 188 (205)
T 1nsj_A 140 DWSLILPYR-DR--FRYLVLSGGL-NPENVRSAIDV-VRPFAVDVSSGVEAFPG 188 (205)
T ss_dssp CGGGTGGGG-GG--SSCEEEESSC-CTTTHHHHHHH-HCCSEEEESGGGEEETT
T ss_pred CHHHHHhhh-cC--CCcEEEECCC-CHHHHHHHHHh-cCCCEEEECCceecCCC
Confidence 787765542 22 5799999999 78888777765 57889989888765454
No 332
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=94.44 E-value=0.24 Score=49.96 Aligned_cols=68 Identities=6% Similarity=0.067 Sum_probs=50.0
Q ss_pred HHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 333 IADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 333 a~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
+..+.++|+|.|.++.-+ .+.++++.+.+..++|+++.||| +++.+.++.+ +|+|+|.+|.....-|
T Consensus 209 a~eA~~aGaD~I~ld~~~----------~~~~k~av~~v~~~ipi~AsGGI-t~eni~~~a~--tGvD~IsVgs~~~~a~ 275 (286)
T 1x1o_A 209 LEEALEAGADLILLDNFP----------LEALREAVRRVGGRVPLEASGNM-TLERAKAAAE--AGVDYVSVGALTHSAK 275 (286)
T ss_dssp HHHHHHHTCSEEEEESCC----------HHHHHHHHHHHTTSSCEEEESSC-CHHHHHHHHH--HTCSEEECTHHHHSCC
T ss_pred HHHHHHcCCCEEEECCCC----------HHHHHHHHHHhCCCCeEEEEcCC-CHHHHHHHHH--cCCCEEEEcHHHcCCC
Confidence 344557899999998632 23355555555336999999999 7999999776 8999999987655545
Q ss_pred C
Q 009196 413 W 413 (540)
Q Consensus 413 w 413 (540)
+
T Consensus 276 ~ 276 (286)
T 1x1o_A 276 A 276 (286)
T ss_dssp C
T ss_pred c
Confidence 4
No 333
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=94.39 E-value=0.096 Score=57.38 Aligned_cols=86 Identities=8% Similarity=0.040 Sum_probs=59.6
Q ss_pred HHHHHHcC---CcEEEEeccc---ccCccC-CCcCHHHHHHHHHHc----CCCceEEEeCCCCCHHHHHHHHhcC-----
Q 009196 333 IADIGTWG---ASAVTVHGRT---RQQRYS-KLADWDYIYQCARKA----SDDLQVLGNGDIYSYLDWNKHKSDC----- 396 (540)
Q Consensus 333 a~~leeaG---vdaItVHgRt---r~q~y~-g~adw~~I~~i~~~~----~~~IPVIgNGdI~s~eDa~~~l~~~----- 396 (540)
+..+.+.| +|+|.+..-. .++.+. .+..++.++++++.+ ..++||++-||| +++.+.+++..+
T Consensus 121 a~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~~g~ 199 (540)
T 3nl6_A 121 VDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVSSNG 199 (540)
T ss_dssp HHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBCTTS
T ss_pred HHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhccccc
Confidence 45567789 9999984321 122332 334588888887763 016999999999 889999987511
Q ss_pred -CCcCeeeecHHHHhCCCchHHHH
Q 009196 397 -PELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 397 -~gaDgVMIGRgaL~nPwif~eik 419 (540)
.|+|+|.++++++..|.....++
T Consensus 200 ~~GadgvAVvsaI~~a~dp~~a~~ 223 (540)
T 3nl6_A 200 KRSLDGICVVSDIIASLDAAKSTK 223 (540)
T ss_dssp SCBCSCEEESHHHHTCTTHHHHHH
T ss_pred ccCceEEEEeHHHhcCCCHHHHHH
Confidence 47999999999998776544443
No 334
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=94.31 E-value=0.16 Score=51.46 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=48.6
Q ss_pred HHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHH----cCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 334 ADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARK----ASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 334 ~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~----~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
..+.++|+|.|-++.- +.+.++++++. .+ ++||.++||| +.+.+.++.+ +|||++.+|....
T Consensus 211 ~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~-~~~I~ASGGI-t~~ni~~~~~--aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 211 VQAAEAGADLVLLDNF----------KPEELHPTATVLKAQFP-SVAVEASGGI-TLDNLPQFCG--PHIDVISMGMLTQ 276 (299)
T ss_dssp HHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCT-TSEEEEESSC-CTTTHHHHCC--TTCCEEECTHHHH
T ss_pred HHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCC-CeeEEEECCC-CHHHHHHHHH--CCCCEEEEChhhc
Confidence 3344689999999751 23455544443 33 5999999999 9999999765 8999999998655
Q ss_pred hCCCc
Q 009196 410 IKPWI 414 (540)
Q Consensus 410 ~nPwi 414 (540)
.-|++
T Consensus 277 ~a~~~ 281 (299)
T 2jbm_A 277 AAPAL 281 (299)
T ss_dssp SCCCC
T ss_pred CCCCc
Confidence 44654
No 335
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=94.30 E-value=0.21 Score=48.56 Aligned_cols=92 Identities=16% Similarity=0.193 Sum_probs=71.7
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNK 391 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~ 391 (540)
.||..=+|. ++.+++..+++.|.+.|+..|-|.-|+ +.-.+.|+.+++.++ -++||.|-|.|.+++..
T Consensus 13 ~~vi~Vir~---~~~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~~~I~~l~~~~p--~~~IGAGTVlt~~~a~~ 80 (217)
T 3lab_A 13 KPLIPVIVI---DDLVHAIPMAKALVAGGVHLLEVTLRT-------EAGLAAISAIKKAVP--EAIVGAGTVCTADDFQK 80 (217)
T ss_dssp CSEEEEECC---SCGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCT--TSEEEEECCCSHHHHHH
T ss_pred CCEEEEEEc---CCHHHHHHHHHHHHHcCCCEEEEeCCC-------ccHHHHHHHHHHHCC--CCeEeeccccCHHHHHH
Confidence 366665776 356789999999999999999997664 345688999999995 48999999999999999
Q ss_pred HHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 392 HKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 392 ~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
++. .||+.++.= + .+|.+.+..++
T Consensus 81 ai~--AGA~fivsP-~--~~~evi~~~~~ 104 (217)
T 3lab_A 81 AID--AGAQFIVSP-G--LTPELIEKAKQ 104 (217)
T ss_dssp HHH--HTCSEEEES-S--CCHHHHHHHHH
T ss_pred HHH--cCCCEEEeC-C--CcHHHHHHHHH
Confidence 887 799998761 1 35555555443
No 336
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=94.27 E-value=0.052 Score=53.95 Aligned_cols=151 Identities=17% Similarity=0.196 Sum_probs=87.8
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
|+++. ++|||.|=+-- ..... ..|+-..+.-..+.+...+++|.+.++.||++-+-.|+.... .+.++++.++
T Consensus 33 A~~~~-~aG~dai~vg~-~s~a~--~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~~~Gyg~~~---~~~~~~l~~a 105 (255)
T 2qiw_A 33 AGLVE-EAGFSGLTIGS-HPVAD--ATGSSDGENMNFADYMAVVKKITSAVSIPVSVDVESGYGLSP---ADLIAQILEA 105 (255)
T ss_dssp HHHHH-HTTCSCEEECH-HHHHH--HTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEECTTCTTCCH---HHHHHHHHHT
T ss_pred HHHHH-HcCCCEEEECh-HHHHH--hCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEeccCCCcCcHH---HHHHHHHHHc
Confidence 33444 68999986641 01111 134444444566778888888888889999999999964433 7888888899
Q ss_pred CCcEEEEeccccc---CccCCCcCHHHHHHHHHHcCC-CceEEEeCCCCC-----------HHHHHH---HHhcCCCcCe
Q 009196 340 GASAVTVHGRTRQ---QRYSKLADWDYIYQCARKASD-DLQVLGNGDIYS-----------YLDWNK---HKSDCPELAS 401 (540)
Q Consensus 340 GvdaItVHgRtr~---q~y~g~adw~~I~~i~~~~~~-~IPVIgNGdI~s-----------~eDa~~---~l~~~~gaDg 401 (540)
|+++|.|-+.... ..+......+.|+.+++.... .+|++.+|.... .+++.+ .+++ .|||+
T Consensus 106 Ga~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~e-AGAd~ 184 (255)
T 2qiw_A 106 GAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQ-AGARS 184 (255)
T ss_dssp TCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHH-HTCSE
T ss_pred CCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHH-cCCcE
Confidence 9999999665311 111110112344444443210 378666665443 233321 2334 79999
Q ss_pred eeecHHHHhCCCchHHHHh
Q 009196 402 CMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 402 VMIGRgaL~nPwif~eik~ 420 (540)
|++= .+.++....+|.+
T Consensus 185 i~~e--~~~~~~~~~~i~~ 201 (255)
T 2qiw_A 185 VYPV--GLSTAEQVERLVD 201 (255)
T ss_dssp EEEC--CCCSHHHHHHHHT
T ss_pred EEEc--CCCCHHHHHHHHH
Confidence 9882 2333345566654
No 337
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=94.19 E-value=0.22 Score=47.17 Aligned_cols=97 Identities=12% Similarity=0.082 Sum_probs=62.0
Q ss_pred HHHHHhcccccccEEEEecCCCCCC---hhHHHHHHHHHHHcCCcEEEEecccccCccCC-CcCHHHHHHHHHHcCCCce
Q 009196 301 GIIEATSGTVDKPITIKVRTGYFEG---KNRIDSLIADIGTWGASAVTVHGRTRQQRYSK-LADWDYIYQCARKASDDLQ 376 (540)
Q Consensus 301 eIv~av~~~v~iPVtVKiR~G~~e~---~~~~~~la~~leeaGvdaItVHgRtr~q~y~g-~adw~~I~~i~~~~~~~IP 376 (540)
+.++.+++.+++|+...++..+.+. .....+.+..+.++|++.|++|..... .. ....+.+..+++.++ +++
T Consensus 46 ~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l~~~~~~---~p~~~~~~~i~~~~~~~~-~~~ 121 (223)
T 1y0e_A 46 EDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIALDATLQQ---RPKETLDELVSYIRTHAP-NVE 121 (223)
T ss_dssp HHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEEECSCSC---CSSSCHHHHHHHHHHHCT-TSE
T ss_pred HHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEEeeeccc---CcccCHHHHHHHHHHhCC-Cce
Confidence 4466666667889843233221110 001234456678899999999975321 11 123577899998875 577
Q ss_pred EEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 377 VLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 377 VIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
++. ++.+++++.++.. .|+|.||++
T Consensus 122 v~~--~~~t~~e~~~~~~--~G~d~i~~~ 146 (223)
T 1y0e_A 122 IMA--DIATVEEAKNAAR--LGFDYIGTT 146 (223)
T ss_dssp EEE--ECSSHHHHHHHHH--TTCSEEECT
T ss_pred EEe--cCCCHHHHHHHHH--cCCCEEEeC
Confidence 765 6789999988654 799999875
No 338
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=94.16 E-value=0.097 Score=52.86 Aligned_cols=94 Identities=12% Similarity=0.044 Sum_probs=59.7
Q ss_pred HHHHHHhccccc--ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCH-HHHHHHHHHcCCCce
Q 009196 300 KGIIEATSGTVD--KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADW-DYIYQCARKASDDLQ 376 (540)
Q Consensus 300 ~eIv~av~~~v~--iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw-~~I~~i~~~~~~~IP 376 (540)
...++.+++..+ .+|.|-++ + .+-+..+.++|+|.|-++.-+ +..+ +.++.++...+ ++|
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~-----t----leea~eA~~aGaD~I~LDn~~-------~e~l~~av~~l~~~~~-~v~ 242 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE-----N----LEDALRAVEAGADIVMLDNLS-------PEEVKDISRRIKDINP-NVI 242 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES-----S----HHHHHHHHHTTCSEEEEESCC-------HHHHHHHHHHHHHHCT-TSE
T ss_pred HHHHHHHHHhCCCCceEEEEeC-----C----HHHHHHHHHcCCCEEEECCCC-------HHHHHHHHHHhhccCC-Cce
Confidence 445666666552 45666433 1 233445567899999998732 1121 22333333233 699
Q ss_pred EEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 377 VLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 377 VIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
|.++||| +++.+.++.. +|+|++.+|+....-|+
T Consensus 243 ieASGGI-t~eni~~~a~--tGVD~IsvGslt~sa~~ 276 (285)
T 1o4u_A 243 VEVSGGI-TEENVSLYDF--ETVDVISSSRLTLQEVF 276 (285)
T ss_dssp EEEEECC-CTTTGGGGCC--TTCCEEEEGGGTSSCCC
T ss_pred EEEECCC-CHHHHHHHHH--cCCCEEEEeHHHcCCCC
Confidence 9999999 7888888544 89999999986665554
No 339
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=94.15 E-value=0.4 Score=51.14 Aligned_cols=125 Identities=8% Similarity=0.045 Sum_probs=90.0
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+|+.+++.|+.+..+.||..|-|..|.+ +++.-.+.|++||++. ++.+.|-.-.+|+ ..++
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~--~~~A 243 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFPEARLALDPNGAWK--LDEA 243 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBC--HHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCC--HHHH
Confidence 47889988887765335999999986642 2333456677777776 5667776667774 5788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcC----HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLAD----WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~ad----w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
..+++.|++. +.+| +|.. .+-| ++..+++++.+ ++||.+.=-+.++.++..+++. ..+|.+++
T Consensus 244 ~~~~~~L~~~-i~~i-------EeP~-~~~d~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~di~~~ 310 (450)
T 3mzn_A 244 VRVLEPIKHL-LSYA-------EDPC-GQEGGFSGRETMAEFKKRT--GLPTATNMIATDYKQLQYAVQL-NSVDIPLA 310 (450)
T ss_dssp HHHHGGGGGG-CSEE-------ESSB-CCBTTBCHHHHHHHHHHHH--CCCEEESSSSSSHHHHHHHHHH-TCCSEEBC
T ss_pred HHHHHHhhhc-ccee-------eCCC-CcccccchHHHHHHHHHhc--CCCEEeCCccCCHHHHHHHHHc-CCCCEEEe
Confidence 9999999886 6655 3443 2234 67889999988 6999886667889999998876 67887754
No 340
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.14 E-value=0.28 Score=49.31 Aligned_cols=108 Identities=18% Similarity=0.187 Sum_probs=70.6
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccccc-EEEEecCC-CCCChhHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKP-ITIKVRTG-YFEGKNRIDSLIADIG 337 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iP-VtVKiR~G-~~e~~~~~~~la~~le 337 (540)
|+++. ++|||.| + .|--...+ .-|+-..+.-..+.+...+++|++.++.| |.+-+--| +..+...+.+-+.++.
T Consensus 30 A~l~e-~aG~d~i-l-vGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~ 105 (275)
T 1o66_A 30 AALMD-DAGVEML-L-VGDSLGMA-VQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAELM 105 (275)
T ss_dssp HHHHH-HTTCCEE-E-ECTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEE-E-ECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHHHH
Confidence 44454 7899999 4 24333332 34665556667788888889998888764 55655442 2235677888888888
Q ss_pred HcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC
Q 009196 338 TWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD 382 (540)
Q Consensus 338 eaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd 382 (540)
++|+++|.|-+.. .-.+.|+.+.+. .|||++.=|
T Consensus 106 kaGa~aVklEdg~--------e~~~~I~al~~a---gIpV~gHiG 139 (275)
T 1o66_A 106 AAGAHMVKLEGGV--------WMAETTEFLQMR---GIPVCAHIG 139 (275)
T ss_dssp HTTCSEEEEECSG--------GGHHHHHHHHHT---TCCEEEEEE
T ss_pred HcCCcEEEECCcH--------HHHHHHHHHHHc---CCCeEeeec
Confidence 8999999997641 223456666553 699985433
No 341
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=94.14 E-value=0.25 Score=50.64 Aligned_cols=88 Identities=16% Similarity=0.035 Sum_probs=62.0
Q ss_pred cccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccC--CCc----CHHHHHHHHHHcCCCceEEEe--
Q 009196 309 TVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYS--KLA----DWDYIYQCARKASDDLQVLGN-- 380 (540)
Q Consensus 309 ~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~--g~a----dw~~I~~i~~~~~~~IPVIgN-- 380 (540)
..+.|+.+.+..|++ . ..+.+.++.+|+++|.||.....+... +.. .|+.+.++++.+ ++||+.-
T Consensus 114 ~~~~pv~~~i~~~~~--~---~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~ 186 (349)
T 1p0k_A 114 NPNGLIFANLGSEAT--A---AQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEV 186 (349)
T ss_dssp CSSSCEEEEEETTCC--H---HHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEE
T ss_pred CCCceeEEeecCCCC--H---HHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEec
Confidence 347899988876553 2 245566788999999999765433222 111 257899999888 6999975
Q ss_pred CCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 381 GDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 381 GdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
|...+.+++..+.+ .|||+|.+.
T Consensus 187 ~~~~~~~~a~~a~~--~Gad~I~v~ 209 (349)
T 1p0k_A 187 GFGMSKASAGKLYE--AGAAAVDIG 209 (349)
T ss_dssp SSCCCHHHHHHHHH--HTCSEEEEE
T ss_pred CCCCCHHHHHHHHH--cCCCEEEEc
Confidence 55578999988665 799999883
No 342
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=94.13 E-value=0.058 Score=58.87 Aligned_cols=73 Identities=12% Similarity=0.111 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
.+..+.+..|.++|+|.|.|..- .+++. .-.+.++.|++..| ++||| .|.|.|++-+..++. .|||+|-||-
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~a---hGhs~-~v~~~i~~ik~~~p-~~~vi-aGNVaT~e~a~~Li~--aGAD~vkVGi 351 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSS---QGNSV-YQIEFIKWIKQTYP-KIDVI-AGNVVTREQAAQLIA--AGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCS---CCCSH-HHHHHHHHHHHHCT-TSEEE-EEEECSHHHHHHHHH--HTCSEEEECS
T ss_pred ccHHHHHHHHHhcCCcEEEEecc---ccccH-HHHHHHHHHHhhCC-cceEE-eccccCHHHHHHHHH--cCCCEEeecC
Confidence 45678899999999999998421 12211 23688999999987 68877 488999999999776 7999998775
Q ss_pred H
Q 009196 407 G 407 (540)
Q Consensus 407 g 407 (540)
|
T Consensus 352 G 352 (556)
T 4af0_A 352 G 352 (556)
T ss_dssp S
T ss_pred C
Confidence 4
No 343
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=94.08 E-value=0.34 Score=52.06 Aligned_cols=125 Identities=10% Similarity=0.065 Sum_probs=89.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+|+++++.|+.+.++.||..|-|..|.+ +++.-.+.|++||+++ ++.+.|-.-.+| +..++
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w--~~~~A 261 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFPHARVTLDPNGAW--SLNEA 261 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTBB--CHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCC--CHHHH
Confidence 57889988887665235999999987642 2233345677777776 566777666677 35788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcC----HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLAD----WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~ad----w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
..+++.|++. +.+| +|.. .+-| ++..+++++.+ ++||.+.=-+.++.++..+++. ..+|.+++
T Consensus 262 i~~~~~Le~~-l~~i-------EeP~-~~~d~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~-~a~div~~ 328 (470)
T 3p0w_A 262 IALCKGQGHL-VAYA-------EDPC-GPEAGYSGREVMAEFKRAT--GIPTATNMIATDWRQMGHAVQL-HAVDIPLA 328 (470)
T ss_dssp HHHHTTCTTT-CSEE-------ESCB-CCBTTBCHHHHHHHHHHHH--CCCEEESSSSCSHHHHHHHHHT-TCCSEEBC
T ss_pred HHHHHhcccc-ceee-------cCCC-ChhhccchHHHHHHHHhcC--CCCEEeCCccCCHHHHHHHHHc-CCCCEEEe
Confidence 8899888876 5554 3443 2234 67789999988 6999986677889999998875 66887754
No 344
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.03 E-value=0.27 Score=48.11 Aligned_cols=114 Identities=12% Similarity=0.007 Sum_probs=81.1
Q ss_pred HHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe
Q 009196 301 GIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN 380 (540)
Q Consensus 301 eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN 380 (540)
++++.+.+ .+|..=+|. ++.+++..+++.|.+.|+..|-|.-|+ +...+.|+++++.++ -.++|.
T Consensus 26 ~~~~~l~~---~~vv~Vir~---~~~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~e~I~~l~~~~~--~~~iGa 90 (232)
T 4e38_A 26 TINNQLKA---LKVIPVIAI---DNAEDIIPLGKVLAENGLPAAEITFRS-------DAAVEAIRLLRQAQP--EMLIGA 90 (232)
T ss_dssp HHHHHHHH---HCEEEEECC---SSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCT--TCEEEE
T ss_pred HHHHHHHh---CCEEEEEEc---CCHHHHHHHHHHHHHCCCCEEEEeCCC-------CCHHHHHHHHHHhCC--CCEEeE
Confidence 34444433 255555675 345789999999999999999996554 334688999999985 479999
Q ss_pred CCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhc-CCC---CCCHHHHHHH
Q 009196 381 GDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQ-RHW---DITSGERLNI 434 (540)
Q Consensus 381 GdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~-~~~---~~s~~erl~i 434 (540)
|-|.+.+++..+++ .|||+|+..- .+|.+....++. ..+ -.|++|-..-
T Consensus 91 GTVlt~~~a~~Ai~--AGA~fIvsP~---~~~~vi~~~~~~gi~~ipGv~TptEi~~A 143 (232)
T 4e38_A 91 GTILNGEQALAAKE--AGATFVVSPG---FNPNTVRACQEIGIDIVPGVNNPSTVEAA 143 (232)
T ss_dssp ECCCSHHHHHHHHH--HTCSEEECSS---CCHHHHHHHHHHTCEEECEECSHHHHHHH
T ss_pred CCcCCHHHHHHHHH--cCCCEEEeCC---CCHHHHHHHHHcCCCEEcCCCCHHHHHHH
Confidence 99999999999887 7999998752 466666665543 221 2366664443
No 345
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=94.00 E-value=1.1 Score=43.45 Aligned_cols=192 Identities=11% Similarity=-0.025 Sum_probs=100.7
Q ss_pred CCcEEEccCCCCCCHHH-HHHHHHhC--CCEEEeccceechhccCChhhhhhhhcccCCCeEE--EEecCCcHHHHHHHH
Q 009196 186 REKLYLAPLTTVGNLPF-RRVCKVLG--ADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFG--VQICGAYPDTLARTV 260 (540)
Q Consensus 186 knrliLAPM~~vtdlpf-R~l~~~~G--adl~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~--vQL~G~~p~~~a~AA 260 (540)
++++++|= +++++.. ..+..+.| ++++=.-+- -+...+..-++.++.. .+.++. +-++ --|+....++
T Consensus 12 ~~~lilAl--D~~~~~~a~~~v~~~~~~v~~~Kvg~~---lf~~~G~~~v~~l~~~-~g~~v~lD~Kl~-DipnTv~~~~ 84 (228)
T 3m47_A 12 MNRLILAM--DLMNRDDALRVTGEVREYIDTVKIGYP---LVLSEGMDIIAEFRKR-FGCRIIADFKVA-DIPETNEKIC 84 (228)
T ss_dssp GGGEEEEC--CCCSHHHHHHHHHTTTTTCSEEEEEHH---HHHHHCTHHHHHHHHH-HCCEEEEEEEEC-SCHHHHHHHH
T ss_pred CCCeEEEe--CCCCHHHHHHHHHHcCCcccEEEEcHH---HHHhcCHHHHHHHHhc-CCCeEEEEEeec-ccHhHHHHHH
Confidence 46788874 5666543 34455565 454422111 1111122333334331 233443 3443 4567777777
Q ss_pred HHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCC---CC-hhHHHHHHHHH
Q 009196 261 ELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYF---EG-KNRIDSLIADI 336 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~---e~-~~~~~~la~~l 336 (540)
+.+. ++|+|.|.+|.-+ | .+-+...++.+++. +.-|+|=..+.-. +. .+.+..+++..
T Consensus 85 ~~~~-~~gad~vtvh~~~----------G------~~~l~~~~~~~~~~-g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a 146 (228)
T 3m47_A 85 RATF-KAGADAIIVHGFP----------G------ADSVRACLNVAEEM-GREVFLLTEMSHPGAEMFIQGAADEIARMG 146 (228)
T ss_dssp HHHH-HTTCSEEEEESTT----------C------HHHHHHHHHHHHHH-TCEEEEECCCCSGGGGTTHHHHHHHHHHHH
T ss_pred HHHH-hCCCCEEEEeccC----------C------HHHHHHHHHHHHhc-CCCeEEEEeCCCccHHHHHHHHHHHHHHHH
Confidence 7666 6899999998422 1 12333444444321 2235542333211 11 12346678888
Q ss_pred HHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCH-HHHHHHHhcCCCcCeeeecHHHHhCCCch
Q 009196 337 GTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSY-LDWNKHKSDCPELASCMIARGALIKPWIF 415 (540)
Q Consensus 337 eeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~-eDa~~~l~~~~gaDgVMIGRgaL~nPwif 415 (540)
.++|++.+.+.+ + .-+.+..+++.++.+.++ ..+||.-- .+. +++. .|+|.+.+||+.+..+..-
T Consensus 147 ~~~G~~GvV~~a-t---------~~~e~~~ir~~~~~~~~i-v~PGI~~~g~~p-~~~~--aGad~iVvGr~I~~a~dp~ 212 (228)
T 3m47_A 147 VDLGVKNYVGPS-T---------RPERLSRLREIIGQDSFL-ISPGVGAQGGDP-GETL--RFADAIIVGRSIYLADNPA 212 (228)
T ss_dssp HHTTCCEEECCS-S---------CHHHHHHHHHHHCSSSEE-EECC----------CGG--GTCSEEEECHHHHTSSCHH
T ss_pred HHhCCcEEEECC-C---------ChHHHHHHHHhcCCCCEE-EecCcCcCCCCH-hHHH--cCCCEEEECHHHhCCCCHH
Confidence 899999987643 1 124577888877533665 66777422 145 5554 7999999999998755543
Q ss_pred H
Q 009196 416 T 416 (540)
Q Consensus 416 ~ 416 (540)
.
T Consensus 213 ~ 213 (228)
T 3m47_A 213 A 213 (228)
T ss_dssp H
T ss_pred H
Confidence 3
No 346
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=93.85 E-value=0.27 Score=49.75 Aligned_cols=152 Identities=14% Similarity=0.146 Sum_probs=84.9
Q ss_pred HHHHHhCCCCEEEecC-CCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 261 ELIDQQCTVDFIDINM-GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~-GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
+++. ++|||.|=+-. ++- . ..|+-....-..+.+...++.|...+++||++-+-.|+- +..++.+.++++.++
T Consensus 33 ~~~~-~aG~~ai~vsg~~~a--~--~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~v~~~v~~l~~a 106 (295)
T 1s2w_A 33 RIVQ-EAGFKGIWGSGLSVS--A--QLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYG-NFNNARRLVRKLEDR 106 (295)
T ss_dssp HHHH-HHTCSCEEECCHHHH--H--TC---------CHHHHHHHHHHHHTCSSCEEEECCSSCS-SHHHHHHHHHHHHHT
T ss_pred HHHH-HcCCCEEEeChHHHH--H--hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCC-CHHHHHHHHHHHHHc
Confidence 3444 57999987741 111 1 123322223345667778888888889999999999964 567788899999999
Q ss_pred CCcEEEEeccccc--CccCC-----CcC----HHHHHHHHHHcC-CCceEEEeCCCCC----HHHHHH---HHhcCCCcC
Q 009196 340 GASAVTVHGRTRQ--QRYSK-----LAD----WDYIYQCARKAS-DDLQVLGNGDIYS----YLDWNK---HKSDCPELA 400 (540)
Q Consensus 340 GvdaItVHgRtr~--q~y~g-----~ad----w~~I~~i~~~~~-~~IPVIgNGdI~s----~eDa~~---~l~~~~gaD 400 (540)
|+++|.|-+.... .+..+ ... .+.|+.++++.. .+.-|++=-|-.- .+++.+ ++.+ .|||
T Consensus 107 Gaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e-AGAd 185 (295)
T 1s2w_A 107 GVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRN-AGAD 185 (295)
T ss_dssp TCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHH-TTCS
T ss_pred CCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHH-cCCC
Confidence 9999999765411 11111 111 233444444431 1355655555441 244332 2334 8999
Q ss_pred eeeecHHHHhCCCchHHHHh
Q 009196 401 SCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 401 gVMIGRgaL~nPwif~eik~ 420 (540)
+|++=- .+.++..+.++.+
T Consensus 186 ~i~~e~-~~~~~~~~~~i~~ 204 (295)
T 1s2w_A 186 AILMHS-KKADPSDIEAFMK 204 (295)
T ss_dssp EEEECC-CSSSSHHHHHHHH
T ss_pred EEEEcC-CCCCHHHHHHHHH
Confidence 999831 1233445555544
No 347
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=93.83 E-value=1.9 Score=43.07 Aligned_cols=142 Identities=12% Similarity=0.038 Sum_probs=95.6
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEec
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVR 319 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR 319 (540)
...+.|.|.+.+.+++...++.+. ..|+|.||+-.-+= .. ..+.+.+.+++..+++.+ ++|+.+=+|
T Consensus 39 ~p~i~v~l~~~~~~e~~~~~~~~~-~~gaD~VElRvD~l---------~~--~~~~~~v~~~l~~lr~~~~~~PiI~T~R 106 (276)
T 3o1n_A 39 APKIIVSLMGKTITDVKSEALAYR-EADFDILEWRVDHF---------AN--VTTAESVLEAAGAIREIITDKPLLFTFR 106 (276)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHT-TSCCSEEEEEGGGC---------TT--TTCHHHHHHHHHHHHHHCCSSCEEEECC
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHh-hCCCCEEEEEeccc---------cc--cCcHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 346789999999999999888886 57999999964221 00 013467888888898887 799999889
Q ss_pred CCC-----CCChhHHHHHHHHHHHcC-CcEEEEecccccCccCCCcCHHHHHHHHH---HcCCCceEEEe-CC---CCCH
Q 009196 320 TGY-----FEGKNRIDSLIADIGTWG-ASAVTVHGRTRQQRYSKLADWDYIYQCAR---KASDDLQVLGN-GD---IYSY 386 (540)
Q Consensus 320 ~G~-----~e~~~~~~~la~~leeaG-vdaItVHgRtr~q~y~g~adw~~I~~i~~---~~~~~IPVIgN-Gd---I~s~ 386 (540)
.-+ ..+.+...++.+.+.+.| +++|.|--.. +-+.+.++.+ .. ++.||++ =| --+.
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~---------~~~~~~~l~~~a~~~--~~kvI~S~Hdf~~tP~~ 175 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT---------GDDEVKATVGYAHQH--NVAVIMSNHDFHKTPAA 175 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG---------CHHHHHHHHHHHHHT--TCEEEEEEEESSCCCCH
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC---------CHHHHHHHHHHHHhC--CCEEEEEeecCCCCcCH
Confidence 732 224467788888888899 9999995322 1134555443 22 6888885 22 2344
Q ss_pred HHHHHHHhc--CCCcCeeeec
Q 009196 387 LDWNKHKSD--CPELASCMIA 405 (540)
Q Consensus 387 eDa~~~l~~--~~gaDgVMIG 405 (540)
+++...+.+ ..|||.|=|+
T Consensus 176 ~el~~~~~~~~~~GaDIvKia 196 (276)
T 3o1n_A 176 EEIVQRLRKMQELGADIPKIA 196 (276)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEE
Confidence 555544332 1688877555
No 348
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=93.81 E-value=0.18 Score=53.90 Aligned_cols=70 Identities=10% Similarity=0.003 Sum_probs=56.4
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
..+.++.+.++|+++|.+++- .++. ...|+.+..+++.++ .+||+ .|+|.+.+++..++. .|||+|.+|.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a---~g~~-~~~~~~i~~l~~~~p-~~pvi-~G~v~t~~~a~~~~~--~Gad~I~vg~ 303 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTA---HGHS-AGVLRKIAEIRAHFP-NRTLI-AGNIATAEGARALYD--AGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCS---CTTC-HHHHHHHHHHHHHCS-SSCEE-EEEECSHHHHHHHHH--TTCSEEEECS
T ss_pred HHHHHHHHHHcCCCeEEEeee---cCcc-hhHHHHHHHHHHHCC-CCcEe-CCCccCHHHHHHHHH--cCCCEEEECc
Confidence 456788899999999999872 1221 134788999999886 69999 899999999998776 7999998874
No 349
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=93.79 E-value=0.98 Score=45.19 Aligned_cols=119 Identities=18% Similarity=0.081 Sum_probs=79.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+++.++- |.+-+ |- .+..++++
T Consensus 18 D~~~l~~lv~~li-~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGv--g~-~~t~~ai~ 82 (288)
T 2nuw_A 18 NVDALKTHAKNLL-EKGIDAIFVNG----------TTGLGPALSKDEKRQNLNALYDVTHK-LIFQV--GS-LNLNDVME 82 (288)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEETS----------TTTTGGGSCHHHHHHHHHHHTTTCSC-EEEEC--CC-SCHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCC-eEEee--CC-CCHHHHHH
Confidence 5677888888877 57999998863 12333333455556788888877744 66543 42 25678999
Q ss_pred HHHHHHHcCCcEEEEecccccCccCC-Cc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHH
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSK-LA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNK 391 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g-~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~ 391 (540)
+++.++++|+|++.+.. ..|.+ +. -++++..|++++ ++|||. | |--.+++.+.+
T Consensus 83 la~~A~~~Gadavlv~~----P~y~~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~ 146 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSHS----PYYFPRLPEKFLAKYYEEIARIS--SHSLYIYNYPAATGYDIPPSILKS 146 (288)
T ss_dssp HHHHHHTSCCSEEEECC----CCSSCSCCHHHHHHHHHHHHHHC--CSCEEEEECHHHHSCCCCHHHHTT
T ss_pred HHHHHHhcCCCEEEEcC----CcCCCCCCHHHHHHHHHHHHHhc--CCCEEEEECchHhCcCCCHHHHhc
Confidence 99999999999998853 23433 32 266788899888 688764 4 43345555544
No 350
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=93.68 E-value=0.085 Score=53.57 Aligned_cols=86 Identities=13% Similarity=0.035 Sum_probs=61.2
Q ss_pred HHHHHHHHHcCCcEEEEecc-cccCccC----CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGR-TRQQRYS----KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgR-tr~q~y~----g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.++|+..+++|+++|.+--+ +...++. ...+.++|.++++.+ +|||++-+.+...++++.+.+ .|||.| -
T Consensus 31 ~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v--~iPvl~k~~i~~ide~qil~a--aGAD~I-d 105 (297)
T 4adt_A 31 VEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI--SINVLAKVRIGHFVEAQILEE--LKVDML-D 105 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC--CSEEEEEEETTCHHHHHHHHH--TTCSEE-E
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc--CCCEEEeccCCcHHHHHHHHH--cCCCEE-E
Confidence 37899999999999988622 1122222 235789999999998 799999888877888877654 899999 3
Q ss_pred cHHHHhCCCchHHHHh
Q 009196 405 ARGALIKPWIFTEIKE 420 (540)
Q Consensus 405 GRgaL~nPwif~eik~ 420 (540)
.-..+..+.+...+++
T Consensus 106 ~s~~~~~~~li~~i~~ 121 (297)
T 4adt_A 106 ESEVLTMADEYNHINK 121 (297)
T ss_dssp EETTSCCSCSSCCCCG
T ss_pred cCCCCCHHHHHHHHHh
Confidence 2223455677777766
No 351
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=93.67 E-value=2.9 Score=41.31 Aligned_cols=188 Identities=12% Similarity=0.052 Sum_probs=102.8
Q ss_pred CCcEEEccCCCCCCH-HHHHHHHHhCCC--E--EEeccceechhccCChhhhhhhhcccCCCeEEEEecC-CcHHHHHHH
Q 009196 186 REKLYLAPLTTVGNL-PFRRVCKVLGAD--V--TCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICG-AYPDTLART 259 (540)
Q Consensus 186 knrliLAPM~~vtdl-pfR~l~~~~Gad--l--~~TEmi~a~~l~~g~~~e~~ll~~~~~e~p~~vQL~G-~~p~~~a~A 259 (540)
++++++|= ++.+. --..+..+.+.. . +=+++..+. +...++.++.+ +.++++=+-- --|.....+
T Consensus 27 ~~~LivAL--D~~~~~~al~l~~~l~~~v~~~KvG~~l~~~~-----G~~~v~~Lk~~--g~~VflDlK~~DIpnTv~~a 97 (255)
T 3ldv_A 27 DPKVIVAL--DYDNLADALAFVDKIDPSTCRLKVGKEMFTLF-----GPDFVRELHKR--GFSVFLDLKFHDIPNTCSKA 97 (255)
T ss_dssp CCCEEEEE--CCSSHHHHHHHHTTSCGGGCEEEEEHHHHHHH-----HHHHHHHHHHT--TCCEEEEEEECSCHHHHHHH
T ss_pred CCCeEEEc--CCCCHHHHHHHHHHhCCcCcEEEeCHHHHHhh-----CHHHHHHHHhc--CCCEEEEEecccchhHHHHH
Confidence 46777774 44443 344555555533 3 122333221 12233334432 4455544433 336677777
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc-cccc----EEEEecCC--------CCCC-
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT-VDKP----ITIKVRTG--------YFEG- 325 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~-v~iP----VtVKiR~G--------~~e~- 325 (540)
++.+. ++|+|.|.+|. +|+ ++-+...+++..+. .+.| |++-++++ +...
T Consensus 98 ~~~~~-~~gaD~vTVh~-----------~~G-----~~~~~~a~~~~~~~g~~~~~li~VtvLTS~s~~~l~~~g~~~~~ 160 (255)
T 3ldv_A 98 VKAAA-ELGVWMVNVHA-----------SGG-----ERMMAASREILEPYGKERPLLIGVTVLTSMESADLQGIGILSAP 160 (255)
T ss_dssp HHHHH-HTTCSEEEEEG-----------GGC-----HHHHHHHHHHHGGGGGGSCEEEEECSCTTCCHHHHHHTTCCSCH
T ss_pred HHHHH-hcCCCEEEEec-----------cCC-----HHHHHHHHHHHhhcCCCCceEEEEEEEecCCHHHHHhcCCCCCH
Confidence 77776 68999999984 222 23334444444321 1122 34433331 1111
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC-------------CHHHHHHH
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY-------------SYLDWNKH 392 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~-------------s~eDa~~~ 392 (540)
.+.+..+++...++|++.+.+.+ ..+..+++.++.+. ++...||. |+.+ +
T Consensus 161 ~~~V~~~A~~a~~aG~~GvV~sa-------------~e~~~iR~~~g~~f-l~VtPGIr~qg~~~~dQ~Rv~t~~~---a 223 (255)
T 3ldv_A 161 QDHVLRLATLTKNAGLDGVVCSA-------------QEASLLKQHLGREF-KLVTPGIRPAGSEQGDQRRIMTPAQ---A 223 (255)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCH-------------HHHHHHHHHHCTTS-EEEEECCCCTTSTTSSCSSSCCHHH---H
T ss_pred HHHHHHHHHHHHHcCCCEEEECH-------------HHHHHHHHhcCCCc-EEEeCCcccCcCCccceeccCCHHH---H
Confidence 12456778888899999998753 13677777775334 44445553 3444 3
Q ss_pred HhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 393 KSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 393 l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
++ .|+|.+.+||+.+..+.-...+
T Consensus 224 ~~--aGad~iVvGr~I~~a~dp~~a~ 247 (255)
T 3ldv_A 224 IA--SGSDYLVIGRPITQAAHPEVVL 247 (255)
T ss_dssp HH--TTCSEEEECHHHHTCSCHHHHH
T ss_pred HH--cCCCEEEECHHHhCCCCHHHHH
Confidence 44 7999999999999876654443
No 352
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=93.66 E-value=0.36 Score=50.52 Aligned_cols=131 Identities=9% Similarity=0.008 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~ 330 (540)
++.+++.|+... +.||..|-|..|.+.... .-..+++.-.+.|++||+++ ++++.|-.--+|+ ..++.
T Consensus 149 ~e~~~~~a~~~~-~~Gf~~~KlKvg~~~~~~-------~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~--~~~A~ 218 (392)
T 3v5c_A 149 VALMQEEAMQGY-AKGQRHFKIKVGRGGRHM-------PLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYN--LNLTK 218 (392)
T ss_dssp HHHHHHHHHHHH-HTTCCCEEEECCTTTTTS-------CHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCC--HHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECCCCCCccc-------cccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcC--HHHHH
Confidence 566777666555 569999999887532100 00012456667788898876 6788888778884 57889
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHc---CCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKA---SDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~---~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.+++.|++.++.+| +|... .+++..+++++.+ ...+||.+.=.+. ..++.++++. ..+|.|++
T Consensus 219 ~~~~~L~~~~l~~i-------EeP~~--~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~-~a~dii~~ 284 (392)
T 3v5c_A 219 EVLAALSDVNLYWL-------EAAFH--EDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATR-GRVDVLQY 284 (392)
T ss_dssp HHHHHTTTSCCCEE-------ECSSS--CCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHT-TSCCEECC
T ss_pred HHHHhcccCCCeEE-------eCCCC--cCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHc-CCCcEEEe
Confidence 99999999888777 44442 4777788888752 0158877766666 7888888875 67888875
No 353
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.64 E-value=0.79 Score=47.50 Aligned_cols=101 Identities=11% Similarity=-0.027 Sum_probs=70.7
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCA 368 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~ 368 (540)
||.-+.+..++..+-+ +++||.+|.-++ +..+....+..+.+.|.+.+.+|+-+.........|+..|..++
T Consensus 131 ~S~~~~n~~LL~~va~-----~gkPviLstGma---t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk 202 (349)
T 2wqp_A 131 GSGECNNYPLIKLVAS-----FGKPIILSTGMN---SIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLS 202 (349)
T ss_dssp CGGGTTCHHHHHHHHT-----TCSCEEEECTTC---CHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHH
T ss_pred CcccccCHHHHHHHHh-----cCCeEEEECCCC---CHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHH
Confidence 6777888888766543 589999977663 56778888888888999888889654322222346889999999
Q ss_pred HHcCCCceEEEeCCCCCHHHHHHHHhcCCCcC
Q 009196 369 RKASDDLQVLGNGDIYSYLDWNKHKSDCPELA 400 (540)
Q Consensus 369 ~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaD 400 (540)
+.++ ++||..++==....-+..++. .||+
T Consensus 203 ~~f~-~lpVg~sdHt~G~~~~~AAvA--lGA~ 231 (349)
T 2wqp_A 203 EAFP-DAIIGLSDHTLDNYACLGAVA--LGGS 231 (349)
T ss_dssp HHCT-TSEEEEECCSSSSHHHHHHHH--HTCC
T ss_pred HHCC-CCCEEeCCCCCcHHHHHHHHH--hCCC
Confidence 9885 589976543333444555555 5777
No 354
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.60 E-value=0.74 Score=46.46 Aligned_cols=129 Identities=16% Similarity=0.157 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCC--CCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGC--PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GC--P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~ 330 (540)
.+.|.+-++.+. ++|+|+|=+ || |- |. -+.+.+.+++++.. +.++|+= |. ++. ..+..
T Consensus 110 ~~~M~~dI~~~~-~~GAdGvVf--G~L~~d------g~-----iD~~~~~~Li~~a~---~l~vTFH-RA-FD~-~~d~~ 169 (287)
T 3iwp_A 110 IEVMKADIRLAK-LYGADGLVF--GALTED------GH-----IDKELCMSLMAICR---PLPVTFH-RA-FDM-VHDPM 169 (287)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEE--CCBCTT------SC-----BCHHHHHHHHHHHT---TSCEEEC-GG-GGG-CSCHH
T ss_pred HHHHHHHHHHHH-HcCCCEEEE--eeeCCC------CC-----cCHHHHHHHHHHcC---CCcEEEE-Cc-hhc-cCCHH
Confidence 456666777776 789999977 44 32 21 36778888888764 3688873 32 322 12345
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee-eecHH
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC-MIARG 407 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV-MIGRg 407 (540)
+..+.|.+.|++.|-.+|-. .+....++.++++.+....+|+|++-||| +.+.+.++++. +|++.+ +.||.
T Consensus 170 ~Ale~Li~lGvdrILTSG~~----~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV-~~~Ni~~l~~~-tG~~~~H~S~~~ 241 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGCD----SSALEGLPLIKRLIEQAKGRIVVMPGGGI-TDRNLQRILEG-SGATEFHCSARS 241 (287)
T ss_dssp HHHHHHHHHTCSEEEECTTS----SSTTTTHHHHHHHHHHHTTSSEEEECTTC-CTTTHHHHHHH-HCCSEEEECCEE
T ss_pred HHHHHHHHcCCCEEECCCCC----CChHHhHHHHHHHHHHhCCCCEEEECCCc-CHHHHHHHHHh-hCCCEEeECcCc
Confidence 66677788899999887742 12345678888888776557999999999 67777887775 788887 34443
No 355
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.57 E-value=0.21 Score=50.45 Aligned_cols=155 Identities=10% Similarity=0.054 Sum_probs=90.9
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
|+++. ++|||.|=+--+ ....+ ..|+-....-..+.+...+++|.+.+++||++-+-.|+- +..++.+.++++.++
T Consensus 34 A~i~e-~aGf~ai~vs~s-~~a~~-~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~~~~~v~~l~~a 109 (287)
T 3b8i_A 34 ARIAA-DLGFECGILGGS-VASLQ-VLAAPDFALITLSEFVEQATRIGRVARLPVIADADHGYG-NALNVMRTVVELERA 109 (287)
T ss_dssp HHHHH-HTTCSCEEECHH-HHHHH-HHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECTTCSS-SHHHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEeCcH-HHHHH-hcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC-CHHHHHHHHHHHHHh
Confidence 34444 689999866311 11111 123333334456778888999999999999999999964 677888999999999
Q ss_pred CCcEEEEecccccCcc---CC-CcC----HHHHHHHHHHcC-CCceEEEeCCC--CCHHHHHH---HHhcCCCcCeeeec
Q 009196 340 GASAVTVHGRTRQQRY---SK-LAD----WDYIYQCARKAS-DDLQVLGNGDI--YSYLDWNK---HKSDCPELASCMIA 405 (540)
Q Consensus 340 GvdaItVHgRtr~q~y---~g-~ad----w~~I~~i~~~~~-~~IPVIgNGdI--~s~eDa~~---~l~~~~gaDgVMIG 405 (540)
|+++|.|-+.....+. .+ ..+ .+.|+.++++.. .+.-|++=-|- ...+++.+ .+.+ .|||+|++=
T Consensus 110 Ga~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~e-AGAd~i~~e 188 (287)
T 3b8i_A 110 GIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQE-AGADGICLV 188 (287)
T ss_dssp TCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHH-TTCSEEEEE
T ss_pred CCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHH-cCCCEEEec
Confidence 9999999775421111 11 112 233444444421 13445554443 11133321 2334 799999885
Q ss_pred HHHHhCCCchHHHHhc
Q 009196 406 RGALIKPWIFTEIKEQ 421 (540)
Q Consensus 406 RgaL~nPwif~eik~~ 421 (540)
+ +.++..+.++.+.
T Consensus 189 -~-~~~~~~~~~i~~~ 202 (287)
T 3b8i_A 189 -G-VRDFAHLEAIAEH 202 (287)
T ss_dssp -C-CCSHHHHHHHHTT
T ss_pred -C-CCCHHHHHHHHHh
Confidence 2 3444566666543
No 356
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=93.52 E-value=0.012 Score=61.66 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=38.6
Q ss_pred cCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 355 YSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 355 y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.+..+|+.|+.+++.+ ++||+.-| |.+++++..+++ .|||+|.|
T Consensus 208 ~~p~~~~~~i~~i~~~~--~~Pv~vkg-v~t~e~a~~a~~--aGad~I~v 252 (380)
T 1p4c_A 208 MDASFNWEALRWLRDLW--PHKLLVKG-LLSAEDADRCIA--EGADGVIL 252 (380)
T ss_dssp CCTTCCHHHHHHHHHHC--CSEEEEEE-ECCHHHHHHHHH--TTCSEEEE
T ss_pred cCccccHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHH--cCCCEEEE
Confidence 35566899999999998 69999764 899999999776 79999999
No 357
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=93.51 E-value=0.62 Score=46.68 Aligned_cols=108 Identities=13% Similarity=0.014 Sum_probs=73.5
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCC-cEEEEe-cccccCcc-CCCcCHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGA-SAVTVH-GRTRQQRY-SKLADWDYIY 365 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGv-daItVH-gRtr~q~y-~g~adw~~I~ 365 (540)
||..+.+..++.++- .+++||.+|.-+. -+..+....+..+...|. +.+.+| |-+....| ....|+..+.
T Consensus 128 gs~~~~n~~ll~~~a-----~~~kPV~lk~G~~--~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~ 200 (276)
T 1vs1_A 128 GARNMQNFPLLREVG-----RSGKPVLLKRGFG--NTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVA 200 (276)
T ss_dssp CGGGTTCHHHHHHHH-----HHTCCEEEECCTT--CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHH
T ss_pred CcccccCHHHHHHHH-----ccCCeEEEcCCCC--CCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHH
Confidence 788899998877765 2589999987663 245677778888889998 555567 54222233 2346899899
Q ss_pred HHHHHcCCCceEEEeC----CCCC--HHHHHHHHhcCCCcCeeeecHH
Q 009196 366 QCARKASDDLQVLGNG----DIYS--YLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 366 ~i~~~~~~~IPVIgNG----dI~s--~eDa~~~l~~~~gaDgVMIGRg 407 (540)
.+++.. ++||++.- |..+ ..-+...+. .||+|+||=+-
T Consensus 201 ~lk~~~--~lpVi~dssH~~g~~~~~~~~~~aAva--~Ga~Gl~IE~H 244 (276)
T 1vs1_A 201 VLKEAT--HLPVIVDPSHPAGRRSLVPALAKAGLA--AGADGLIVEVH 244 (276)
T ss_dssp HHHHHB--SSCEEECCHHHHCSGGGHHHHHHHHHH--TTCSEEEEEBC
T ss_pred HHHHHh--CCCEEEeCCCCCCccchHHHHHHHHHH--cCCCEEEEEec
Confidence 999987 68987621 2222 233444455 69999999754
No 358
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=93.47 E-value=0.42 Score=46.54 Aligned_cols=84 Identities=15% Similarity=0.039 Sum_probs=56.0
Q ss_pred HHHHHcCCcEEEEecccccCcc--CCCcCHH---HHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 334 ADIGTWGASAVTVHGRTRQQRY--SKLADWD---YIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 334 ~~leeaGvdaItVHgRtr~q~y--~g~adw~---~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
+.+...+...|-+-+|...+.- -..+.-+ .+.++.+.++.+++|+.-|+|.+.+++..+.. .|+||+.||+++
T Consensus 131 ~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~--~~vDG~LVG~a~ 208 (225)
T 1hg3_A 131 AAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAIE--LGTVGVLLASGV 208 (225)
T ss_dssp HHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH--TTCSEEEESHHH
T ss_pred HHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHh--CCCCEEEeCHHH
Confidence 3456678888888777644211 0123333 33333333444799999999999999888654 899999999999
Q ss_pred HhCCCchHHHH
Q 009196 409 LIKPWIFTEIK 419 (540)
Q Consensus 409 L~nPwif~eik 419 (540)
|.-+.+..-++
T Consensus 209 l~a~~~~~~i~ 219 (225)
T 1hg3_A 209 TKAKDPEKAIW 219 (225)
T ss_dssp HTCSSHHHHHH
T ss_pred HCCcCHHHHHH
Confidence 87666554443
No 359
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.46 E-value=0.33 Score=46.61 Aligned_cols=136 Identities=9% Similarity=0.052 Sum_probs=79.9
Q ss_pred CCCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecC--CCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEE
Q 009196 240 SEDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINM--GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIK 317 (540)
Q Consensus 240 ~e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~--GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVK 317 (540)
.+..+...|...+...+.+.++.+. ++|+|.|.+-. |.-+++ ...-.++++.+++.++.|+.|-
T Consensus 5 ~~~~i~psi~a~d~~~l~~~i~~~~-~~Gad~i~l~i~Dg~fv~~-------------~~~~~~~~~~lr~~~~~~~~v~ 70 (228)
T 1h1y_A 5 AAAKIAPSMLSSDFANLAAEADRMV-RLGADWLHMDIMDGHFVPN-------------LTIGAPVIQSLRKHTKAYLDCH 70 (228)
T ss_dssp -CCEEEEBGGGSCGGGHHHHHHHHH-HTTCSEEEEEEEBSSSSSC-------------BCBCHHHHHHHHTTCCSEEEEE
T ss_pred cCCeEEEEeeeCCHHHHHHHHHHHH-HcCCCEEEEEEecCCcCcc-------------hhhCHHHHHHHHhhcCCcEEEE
Confidence 4456788899999888989998887 68999876642 221111 1111256667777666666654
Q ss_pred ecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcC-HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcC
Q 009196 318 VRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLAD-WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDC 396 (540)
Q Consensus 318 iR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~ad-w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~ 396 (540)
+=. .+ . .++++.+.++|+|.|++|+-... .. ...++.+++. .+.++..=.-.++.+..+.+..
T Consensus 71 lmv--~d-~---~~~i~~~~~agad~v~vH~~~~~------~~~~~~~~~i~~~---g~~igv~~~p~t~~e~~~~~~~- 134 (228)
T 1h1y_A 71 LMV--TN-P---SDYVEPLAKAGASGFTFHIEVSR------DNWQELIQSIKAK---GMRPGVSLRPGTPVEEVFPLVE- 134 (228)
T ss_dssp EES--SC-G---GGGHHHHHHHTCSEEEEEGGGCT------TTHHHHHHHHHHT---TCEEEEEECTTSCGGGGHHHHH-
T ss_pred EEe--cC-H---HHHHHHHHHcCCCEEEECCCCcc------cHHHHHHHHHHHc---CCCEEEEEeCCCCHHHHHHHHh-
Confidence 443 12 2 23566677799999999976421 22 3456666653 3444432232343333333332
Q ss_pred C--CcCeeeec
Q 009196 397 P--ELASCMIA 405 (540)
Q Consensus 397 ~--gaDgVMIG 405 (540)
. ++|.|.++
T Consensus 135 ~~~~~d~vl~~ 145 (228)
T 1h1y_A 135 AENPVELVLVM 145 (228)
T ss_dssp SSSCCSEEEEE
T ss_pred cCCCCCEEEEE
Confidence 3 78999884
No 360
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=93.46 E-value=3 Score=40.59 Aligned_cols=139 Identities=16% Similarity=0.074 Sum_probs=81.1
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc-cc--EEEEe
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD-KP--ITIKV 318 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~-iP--VtVKi 318 (540)
.++=+-++ ..|+...++++.+. ++|+|.|-+|.-. | .+-+..+++.+++.-. .| +.|-.
T Consensus 68 v~lD~kl~-Dip~t~~~~i~~~~-~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~G~~~~~~l~v~~ 129 (245)
T 1eix_A 68 IFLDLKFH-DIPNTAAHAVAAAA-DLGVWMVNVHASG----------G------ARMMTAAREALVPFGKDAPLLIAVTV 129 (245)
T ss_dssp EEEEEEEC-SCHHHHHHHHHHHH-HHTCSEEEEBGGG----------C------HHHHHHHHHTTGGGGGGCCEEEEECS
T ss_pred EEEEeecc-ccHHHHHHHHHHHH-hCCCCEEEEeccC----------C------HHHHHHHHHHHHHcCCCCCcEEEEEe
Confidence 34456666 67887777777776 6899999999421 1 1224455665554211 23 12332
Q ss_pred cCCCCC----------Ch-hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHH
Q 009196 319 RTGYFE----------GK-NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYL 387 (540)
Q Consensus 319 R~G~~e----------~~-~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~e 387 (540)
.+.... +. +.+..++..-.+.|.+.+.... ++ ++++++..+ +.+++..|||.---
T Consensus 130 ~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~------------~e-i~~lr~~~~-~~~i~v~gGI~~~g 195 (245)
T 1eix_A 130 LTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA------------QE-AVRFKQVFG-QEFKLVTPGIRPQG 195 (245)
T ss_dssp CTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG------------GG-HHHHHHHHC-SSSEEEECCBCCTT
T ss_pred cCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH------------HH-HHHHHHhcC-CCCEEEECCcCCCC
Confidence 222210 00 1222233323567777654321 34 777777765 46899999997320
Q ss_pred ----------HHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 388 ----------DWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 388 ----------Da~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
.+.++++ .|+|.+.+||+++..+..
T Consensus 196 ~~~~dq~rv~t~~~a~~--aGad~iVvGr~I~~a~dp 230 (245)
T 1eix_A 196 SEAGDQRRIMTPEQALS--AGVDYMVIGRPVTQSVDP 230 (245)
T ss_dssp CCCTTCCSCBCHHHHHH--TTCSEEEECHHHHTSSSH
T ss_pred CCccchhccCCHHHHHH--cCCCEEEECHHHcCCCCH
Confidence 3555554 799999999999987653
No 361
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=93.39 E-value=0.72 Score=47.72 Aligned_cols=130 Identities=8% Similarity=-0.038 Sum_probs=93.4
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc---cccEEEEec
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV---DKPITIKVR 319 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v---~iPVtVKiR 319 (540)
++...+...+++.+++.|+... ..||..+-|..|.. ..+.-.+.++++++++ ++.+.|-.-
T Consensus 141 ~~y~s~~~~~~~~~~~~a~~~~-~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vDaN 204 (376)
T 4h2h_A 141 SSYYSLGVMEPDEAARQALEKQ-REGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAADGN 204 (376)
T ss_dssp ECEEEECSCCHHHHHHHHHHHH-HHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEECT
T ss_pred eEeeecccCCHHHHHHHHHHHH-hcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEeec
Confidence 4556677788998888777665 45999999976531 2233345566666654 456777666
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCc
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPEL 399 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~ga 399 (540)
.+| +..++..+++.+++.++ + + +|.. .+++-.+.+++.+ ++||.+.=.+.+..++.++++. ..+
T Consensus 205 ~~~--~~~~A~~~~~~l~~~~~-~--i-----EeP~---~~~~~~~~l~~~~--~~pia~dE~~~~~~~~~~~~~~-~~~ 268 (376)
T 4h2h_A 205 RGW--TTRDALRFSRECPDIPF-V--M-----EQPC---NSFEDLEAIRPLC--HHALYMDEDGTSLNTVITAAAT-SLV 268 (376)
T ss_dssp TCC--CHHHHHHHHHHCTTSCE-E--E-----ESCS---SSHHHHHHHGGGC--CSCEEESTTCCSHHHHHHHHHT-TCC
T ss_pred cCC--CHHHHHHHHHHHhhccc-c--c-----cCCc---chhhhHhhhhhcc--cCccccCcccCCHHHHHHHHHh-hcc
Confidence 777 45788899998877653 2 2 3432 3577788888887 7999998899999999998885 678
Q ss_pred Ceeee
Q 009196 400 ASCMI 404 (540)
Q Consensus 400 DgVMI 404 (540)
|.|++
T Consensus 269 d~v~~ 273 (376)
T 4h2h_A 269 DGFGM 273 (376)
T ss_dssp SEECC
T ss_pred Ccccc
Confidence 88875
No 362
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=93.33 E-value=1.1 Score=44.74 Aligned_cols=119 Identities=17% Similarity=0.135 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..-..+.-.++++.+++.++- |.+-+ |- .+..++++
T Consensus 17 D~~~l~~lv~~li-~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gv--g~-~~t~~ai~ 81 (286)
T 2r91_A 17 DPELFANHVKNIT-SKGVDVVFVAGT----------TGLGPALSLQEKMELTDAATSAARR-VIVQV--AS-LNADEAIA 81 (286)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHHHHCSS-EEEEC--CC-SSHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCC-EEEee--CC-CCHHHHHH
Confidence 5677888888777 579999988631 2222222344445666666666543 66644 32 25678999
Q ss_pred HHHHHHHcCCcEEEEecccccCccCC-Cc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHH
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSK-LA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNK 391 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g-~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~ 391 (540)
+++.++++|+|++.+.. ..|.+ +. -++++..|++++ ++|||. | |--.+++.+.+
T Consensus 82 la~~A~~~Gadavlv~~----P~y~~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 82 LAKYAESRGAEAVASLP----PYYFPRLSERQIAKYFRDLCSAV--SIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHHHTTCSEEEECC----SCSSTTCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHHHhcCCCEEEEcC----CcCCCCCCHHHHHHHHHHHHHhc--CCCEEEEeChhhcCCCCCHHHHHh
Confidence 99999999999998853 23433 32 256788888888 688764 4 43346666655
No 363
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=93.27 E-value=0.5 Score=50.50 Aligned_cols=125 Identities=6% Similarity=-0.009 Sum_probs=89.0
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~ 329 (540)
.+|+.+++.|+.+..+.||..|-|..|.+ +++.-.+.|++||++. ++.+.|-.-.+| +..++
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w--~~~~A 246 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCW--SLDEA 246 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBS--CHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCC--CHHHH
Confidence 47889988887664335999999976542 2233345677777776 567777777777 35788
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcC----HHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLAD----WDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~ad----w~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
..+++.|++. +.+| +|.. .+-| ++..+++++.+ ++||.+.=-+.++.++..+++. ..+|.+++
T Consensus 247 ~~~~~~L~~~-l~~i-------EeP~-~~~d~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~-~a~di~~~ 313 (455)
T 3pfr_A 247 IQLCKGLNDV-LTYA-------EDPC-IGENGYSGREIMAEFRRRT--GIPTATNMIATNWREMCHAIML-QSVDIPLA 313 (455)
T ss_dssp HHHHTTCTTT-CSEE-------ESCB-CCBTTBCHHHHHHHHHHHH--CCCEEESSSCCSHHHHHHHHHH-TCCSEEBC
T ss_pred HHHHHhhccc-ceee-------ecCC-ChhhccchHHHHHHHHhcC--CCCEEeCCCcCCHHHHHHHHHc-CCCCEEEe
Confidence 8899888876 5554 3443 2233 67889999988 6999886567788999998876 67887654
No 364
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=93.23 E-value=2.7 Score=40.92 Aligned_cols=138 Identities=12% Similarity=0.094 Sum_probs=79.5
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc--cc--cc--EEE
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT--VD--KP--ITI 316 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~--v~--iP--VtV 316 (540)
++=+-++ ..|+....+++.+. ++|+|.|-+|.-. | .+.+...++.+++. .+ .| +.|
T Consensus 59 ~lD~kl~-Dip~t~~~~~~~~~-~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~~~~G~~~~~~lav 120 (246)
T 2yyu_A 59 FLDLKLH-DIPNTVKQAMKGLA-RVGADLVNVHAAG----------G------RRMMEAAIEGLDAGTPSGRMRPRCIAV 120 (246)
T ss_dssp EEEEEEC-SCHHHHHHHHHHHH-HTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCSSSCCCEEEEE
T ss_pred EEEeecc-cchHHHHHHHHHHH-hcCCCEEEEECCC----------C------HHHHHHHHHHHHhhcccCCcCCCEEEE
Confidence 3445665 66888777777776 6899999999421 1 12234455555441 22 24 334
Q ss_pred EecCCCC-C----------C-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC
Q 009196 317 KVRTGYF-E----------G-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY 384 (540)
Q Consensus 317 KiR~G~~-e----------~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~ 384 (540)
...++.. + + .+.+..++....+.|.+.+.... ++ ++++++..+ ..+++..|||.
T Consensus 121 ~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~------------~e-i~~lr~~~~-~~~i~V~gGI~ 186 (246)
T 2yyu_A 121 TQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA------------NE-AAFIKERCG-ASFLAVTPGIR 186 (246)
T ss_dssp SSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH------------HH-HHHHHHHHC-TTSEEEECCCC
T ss_pred EeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH------------HH-HHHHHHhcC-CCCEEEeCCcC
Confidence 3333320 0 0 01122222223567777654321 34 777887765 35589999997
Q ss_pred CH-H---------HHHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 385 SY-L---------DWNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 385 s~-e---------Da~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
-- . .+.++++ .|+|.+.+||+.+..+..
T Consensus 187 ~~g~~~~dq~rv~t~~~a~~--aGad~iVvGr~I~~a~dp 224 (246)
T 2yyu_A 187 FADDAAHDQVRVVTPRKARA--LGSDYIVIGRSLTRAADP 224 (246)
T ss_dssp CCC-------CCCCHHHHHH--HTCSEEEECHHHHTSSSH
T ss_pred CCCCCcccccccCCHHHHHH--cCCCEEEECHhhcCCCCH
Confidence 32 0 3445454 689999999999986653
No 365
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=93.22 E-value=0.084 Score=53.46 Aligned_cols=66 Identities=12% Similarity=0.100 Sum_probs=35.9
Q ss_pred HHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCC------CceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 336 IGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASD------DLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 336 leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~------~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
+.++|+|.|-++.- +.+.++++++.+.. ++||.++||| +.+.+.++.+ +|+|++.+|+...
T Consensus 215 A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~--~GvD~i~vGs~i~ 281 (294)
T 3c2e_A 215 AIEAGADVIMLDNF----------KGDGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLC--DDIDIYSTSSIHQ 281 (294)
T ss_dssp HHHHTCSEEECCC-------------------------------CCEEEEECCC-CC------CC--CSCSEEECGGGTS
T ss_pred HHHcCCCEEEECCC----------CHHHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHH--cCCCEEEEechhc
Confidence 34579999998652 12344444444322 3899999999 9999999665 8999999998754
Q ss_pred hCCCc
Q 009196 410 IKPWI 414 (540)
Q Consensus 410 ~nPwi 414 (540)
.-|++
T Consensus 282 ~a~~~ 286 (294)
T 3c2e_A 282 GTPVI 286 (294)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 44553
No 366
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=93.12 E-value=0.66 Score=46.78 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=72.7
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCC-CcCHHHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSK-LADWDYIYQC 367 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g-~adw~~I~~i 367 (540)
||..+++.+++.++- .+++||.+|.-+.. +..+....+..+.+.|..-|++--|+-.-.|.. ..|+..+..+
T Consensus 117 gA~~~~n~~LLr~va-----~~gkPVilK~G~~~--t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~l 189 (285)
T 3sz8_A 117 PAFLARQTDLVVAIA-----KAGKPVNVKKPQFM--SPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQM 189 (285)
T ss_dssp CGGGTTCHHHHHHHH-----HTSSCEEEECCTTS--CGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHH
T ss_pred CccccCCHHHHHHHH-----ccCCcEEEeCCCCC--CHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHH
Confidence 788889988666543 35899999887642 345667788888999988777643432223433 2588899999
Q ss_pred HHHcCCCceEEEeCCCC---------------C--HHHHHHHHhcCCCcCeeeecH
Q 009196 368 ARKASDDLQVLGNGDIY---------------S--YLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 368 ~~~~~~~IPVIgNGdI~---------------s--~eDa~~~l~~~~gaDgVMIGR 406 (540)
++.++ ++||++..+=. . +.-+..++. .||||+||=+
T Consensus 190 k~~~~-~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA--~GA~gl~IE~ 242 (285)
T 3sz8_A 190 AETTG-GCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGIA--VGIAGLFLEA 242 (285)
T ss_dssp HHHTT-SCCEEEETTTTCC---------------HHHHHHHHHH--HCCSEEEEEE
T ss_pred HHhCC-CCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHHH--hCCCEEEEEe
Confidence 99873 39999853332 1 233445555 6999999863
No 367
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.11 E-value=1.2 Score=46.80 Aligned_cols=101 Identities=8% Similarity=-0.021 Sum_probs=70.0
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCC-cEEEEecccccCccCCCcCHHHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGA-SAVTVHGRTRQQRYSKLADWDYIYQC 367 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGv-daItVHgRtr~q~y~g~adw~~I~~i 367 (540)
||.-+.+..++..+-+ +++||.+|.-+. +..+....+..+.+.|. +.+.+|+-+.........|+..|..+
T Consensus 141 gS~~~~N~pLL~~va~-----~gKPViLStGma---Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~L 212 (385)
T 1vli_A 141 ASYEINHLPLLKYVAR-----LNRPMIFSTAGA---EISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPML 212 (385)
T ss_dssp CGGGTTCHHHHHHHHT-----TCSCEEEECTTC---CHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHH
T ss_pred CcccccCHHHHHHHHh-----cCCeEEEECCCC---CHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHH
Confidence 7777889888776543 589999977663 56788888888999998 66777864332222234588999999
Q ss_pred HHHcCCCceEEEeCCCCC-HHHHHHHHhcCCCcC
Q 009196 368 ARKASDDLQVLGNGDIYS-YLDWNKHKSDCPELA 400 (540)
Q Consensus 368 ~~~~~~~IPVIgNGdI~s-~eDa~~~l~~~~gaD 400 (540)
++.++ ++||..++=-.. ..-+..++. .||+
T Consensus 213 k~~f~-~lpVG~SdHt~G~~~~~~AAvA--lGA~ 243 (385)
T 1vli_A 213 AAAFP-EAVIGFSDHSEHPTEAPCAAVR--LGAK 243 (385)
T ss_dssp HHHST-TSEEEEEECCSSSSHHHHHHHH--TTCS
T ss_pred HHHcC-CCCEEeCCCCCCchHHHHHHHH--cCCC
Confidence 99885 589965543323 445555565 5777
No 368
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=93.10 E-value=0.43 Score=49.51 Aligned_cols=108 Identities=9% Similarity=0.001 Sum_probs=73.8
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE--ecccccCcc-CCCcCHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV--HGRTRQQRY-SKLADWDYIY 365 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV--HgRtr~q~y-~g~adw~~I~ 365 (540)
||..+++..++.++- .+++||.+|.-+. -+..+....+..+...|..-|++ ||-+....| ....|+..+.
T Consensus 196 gAr~~~n~~LL~~va-----~~~kPVilk~G~~--~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~ 268 (350)
T 1vr6_A 196 GARNAQNFRLLSKAG-----SYNKPVLLKRGFM--NTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVP 268 (350)
T ss_dssp CGGGTTCHHHHHHHH-----TTCSCEEEECCTT--CCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHH
T ss_pred CcccccCHHHHHHHH-----ccCCcEEEcCCCC--CCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHH
Confidence 788899998877765 3689999987663 24567777888888999866665 443222234 4456898999
Q ss_pred HHHHHcCCCceEEEeC----CCCC--HHHHHHHHhcCCCcCeeeecHH
Q 009196 366 QCARKASDDLQVLGNG----DIYS--YLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 366 ~i~~~~~~~IPVIgNG----dI~s--~eDa~~~l~~~~gaDgVMIGRg 407 (540)
.+++.+ ++||++.- |-.+ ..-+..++. .||||+||=+-
T Consensus 269 ~lk~~~--~lpVi~dssHs~G~~~~v~~~a~AAvA--~GA~Gl~IE~H 312 (350)
T 1vr6_A 269 IIRKES--HLPILVDPSHSGGRRDLVIPLSRAAIA--VGAHGIIVEVH 312 (350)
T ss_dssp HHHHHB--SSCEEECHHHHHCSGGGHHHHHHHHHH--HTCSEEEEEBC
T ss_pred HHHHhh--CCCEEEeCCCCCcccchHHHHHHHHHH--hCCCEEEEEec
Confidence 999987 68987621 2222 333444455 69999999754
No 369
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=93.09 E-value=0.68 Score=48.03 Aligned_cols=88 Identities=11% Similarity=0.101 Sum_probs=62.4
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccc------------------------cC-------------
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTR------------------------QQ------------- 353 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr------------------------~q------------- 353 (540)
..|..+.+-.+ .+.+...+++++++++|+++|.|+--+. .+
T Consensus 122 ~~~~~~QLy~~--~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 199 (370)
T 1gox_A 122 PGIRFFQLYVY--KDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSG 199 (370)
T ss_dssp CCCEEEEECCB--SSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------
T ss_pred CCCceEEEecC--CCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCcc
Confidence 35677755433 2445667889999999999988764210 00
Q ss_pred -------ccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 354 -------RYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 354 -------~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
...+...|+.+..+++.+ ++||+. +++.+++++..+++ .|+|+|.|+
T Consensus 200 ~~~~v~~~~~~~~~~~~i~~l~~~~--~~pv~v-K~~~~~e~a~~a~~--~Gad~I~vs 253 (370)
T 1gox_A 200 LSSYVAGQIDRSLSWKDVAWLQTIT--SLPILV-KGVITAEDARLAVQ--HGAAGIIVS 253 (370)
T ss_dssp HHHHHHHTBCTTCCHHHHHHHHHHC--CSCEEE-ECCCSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHhhcCccchHHHHHHHHHHh--CCCEEE-EecCCHHHHHHHHH--cCCCEEEEC
Confidence 001233688899999998 799995 66789999988776 799999884
No 370
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=93.09 E-value=0.67 Score=45.98 Aligned_cols=96 Identities=11% Similarity=0.142 Sum_probs=60.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
+++...+-|+... +.|+|.||||+|. .....++.+.+++..+...+++||+|-..- .+
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~g~------------~~v~~~ee~~rvv~~i~~~~~~pisIDT~~---------~~ 80 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNVGP------------AVQDKVSAMEWLVEVTQEVSNLTLCLDSTN---------IK 80 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECSC---------HH
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECCCC------------CCCChHHHHHHHHHHHHHhCCCeEEEeCCC---------HH
Confidence 4555666666555 5699999998743 233456778888888888779999995431 23
Q ss_pred HHHHHHHc--CCcEEE-EecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 332 LIADIGTW--GASAVT-VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 332 la~~leea--GvdaIt-VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
.++...++ |++.|. |.+- ...++.+..+.... ++|||+
T Consensus 81 v~~aAl~a~~Ga~iINdvs~~--------~d~~~~~~~~~a~~--~~~vvl 121 (262)
T 1f6y_A 81 AIEAGLKKCKNRAMINSTNAE--------REKVEKLFPLAVEH--GAALIG 121 (262)
T ss_dssp HHHHHHHHCSSCEEEEEECSC--------HHHHHHHHHHHHHT--TCEEEE
T ss_pred HHHHHHhhCCCCCEEEECCCC--------cccHHHHHHHHHHh--CCcEEE
Confidence 45555555 988885 5442 12343455555556 688887
No 371
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=93.08 E-value=1.2 Score=44.64 Aligned_cols=119 Identities=14% Similarity=0.041 Sum_probs=79.5
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++.+++.++- |.+-+ |- .+..++++
T Consensus 18 D~~~l~~lv~~li-~~Gv~gl~~~G----------ttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGv--g~-~~t~~ai~ 82 (293)
T 1w3i_A 18 DKEKLKIHAENLI-RKGIDKLFVNG----------TTGLGPSLSPEEKLENLKAVYDVTNK-IIFQV--GG-LNLDDAIR 82 (293)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHTTCSC-EEEEC--CC-SCHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHcCC-EEEec--CC-CCHHHHHH
Confidence 5677888888877 57999998863 12222223444556777877777644 66543 42 35678999
Q ss_pred HHHHHHHcCCcEEEEecccccCccCC-Cc---CHHHHHHHHHHcCCCceEEE-e-----CCCCCHHHHHH
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSK-LA---DWDYIYQCARKASDDLQVLG-N-----GDIYSYLDWNK 391 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g-~a---dw~~I~~i~~~~~~~IPVIg-N-----GdI~s~eDa~~ 391 (540)
+++.++++|+|++.+.. ..|.+ +. -+++++.|++++ ++||+. | |--.+++.+.+
T Consensus 83 la~~A~~~Gadavlv~~----P~y~~~~s~~~l~~~f~~va~a~--~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 83 LAKLSKDFDIVGIASYA----PYYYPRMSEKHLVKYFKTLCEVS--PHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHHHGGGSCCSEEEEEC----CCSCSSCCHHHHHHHHHHHHHHC--SSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHHHhcCCCEEEEcC----CCCCCCCCHHHHHHHHHHHHhhC--CCCEEEEECchhhCcCCCHHHHHh
Confidence 99999999999998853 23433 32 256788899888 688764 4 43346776655
No 372
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.06 E-value=0.47 Score=48.13 Aligned_cols=150 Identities=11% Similarity=0.052 Sum_probs=87.1
Q ss_pred HHHHHhCCCCEEEecC-CCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHc
Q 009196 261 ELIDQQCTVDFIDINM-GCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTW 339 (540)
Q Consensus 261 ~~~~~~aG~D~IDIN~-GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leea 339 (540)
++++ ++|||.|=+-- ++- . ...|+-...+-..+.+...++.|...+++||++-+-.|+- +..++.+.++.+.++
T Consensus 36 ~l~e-~aGf~ai~vs~~s~a--~-~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~v~~l~~a 110 (298)
T 3eoo_A 36 KMAE-AVGFKAVYLSGGGVA--A-NSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIARTIRSFIKA 110 (298)
T ss_dssp HHHH-HHTCSCEEECHHHHH--H-HTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHHHHHHHHT
T ss_pred HHHH-HcCCCEEEECcHHHH--H-HhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHHHHHHHHh
Confidence 3344 67999887741 111 0 0123222223345667777788877789999999999974 667788889999999
Q ss_pred CCcEEEEecccccCc--cCC---CcCH-HHHHHH---HHHcCCCceEEEeCCCCCH--HH-------HHHHHhcCCCcCe
Q 009196 340 GASAVTVHGRTRQQR--YSK---LADW-DYIYQC---ARKASDDLQVLGNGDIYSY--LD-------WNKHKSDCPELAS 401 (540)
Q Consensus 340 GvdaItVHgRtr~q~--y~g---~adw-~~I~~i---~~~~~~~IPVIgNGdI~s~--eD-------a~~~l~~~~gaDg 401 (540)
|+++|.|-+.....+ ..+ .... +++.+| +++.. +.+++.++..... +. +..+. + .|||+
T Consensus 111 Gaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~-~~~~~I~ARTDa~~~~gldeai~Ra~ay~-~-AGAD~ 187 (298)
T 3eoo_A 111 GVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDART-DETFVIMARTDAAAAEGIDAAIERAIAYV-E-AGADM 187 (298)
T ss_dssp TCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCS-STTSEEEEEECTHHHHHHHHHHHHHHHHH-H-TTCSE
T ss_pred CCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhcc-CCCeEEEEeehhhhhcCHHHHHHHHHhhH-h-cCCCE
Confidence 999999987653211 111 1222 344444 33332 2344444444432 22 22223 3 79999
Q ss_pred eeecHHHHhCCCchHHHHh
Q 009196 402 CMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 402 VMIGRgaL~nPwif~eik~ 420 (540)
|++= | +.++..+.++.+
T Consensus 188 if~~-~-~~~~ee~~~~~~ 204 (298)
T 3eoo_A 188 IFPE-A-MKTLDDYRRFKE 204 (298)
T ss_dssp EEEC-C-CCSHHHHHHHHH
T ss_pred EEeC-C-CCCHHHHHHHHH
Confidence 9883 1 245555555544
No 373
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=93.05 E-value=0.42 Score=47.74 Aligned_cols=105 Identities=12% Similarity=0.100 Sum_probs=70.2
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccc-cEEEEecCCCCCChhHHHHHHHHHHH
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDK-PITIKVRTGYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~i-PVtVKiR~G~~e~~~~~~~la~~lee 338 (540)
|+++. ++|||.|=+ |-...++ ..|+-..+.-..+.+...+++|++.++. +|.+-+--|-..+...+.+-+.++.+
T Consensus 30 A~l~e-~aG~d~ilv--Gdsl~~~-~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~k 105 (264)
T 1m3u_A 30 AKLFA-DEGLNVMLV--GDSLGMT-VQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMR 105 (264)
T ss_dssp HHHHH-HHTCCEEEE--CTTHHHH-TTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHH
T ss_pred HHHHH-HcCCCEEEE--CHHHHHH-HcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHH
Confidence 44444 679999966 5444332 3466555666678888888999888875 46666555323366778888888888
Q ss_pred cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 339 WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 339 aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+|+++|.+-+.. .-.+.|+.+.+. .|||+|
T Consensus 106 aGa~aVklEgg~--------e~~~~I~al~~a---gipV~g 135 (264)
T 1m3u_A 106 AGANMVKIEGGE--------WLVETVQMLTER---AVPVCG 135 (264)
T ss_dssp TTCSEEECCCSG--------GGHHHHHHHHHT---TCCEEE
T ss_pred cCCCEEEECCcH--------HHHHHHHHHHHC---CCCeEe
Confidence 999999996531 223455666553 699985
No 374
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=92.99 E-value=0.47 Score=47.16 Aligned_cols=108 Identities=11% Similarity=0.005 Sum_probs=71.2
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEE-ecc-cccCccC-CCcCHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTV-HGR-TRQQRYS-KLADWDYIY 365 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItV-HgR-tr~q~y~-g~adw~~I~ 365 (540)
||..+.+..++.++.+ +++||.+|.-+. -+..++...+..+...|...+++ |-. +....|. ...|+..+.
T Consensus 113 ga~~~~n~~ll~~~a~-----~~kPV~lk~G~~--~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~ 185 (262)
T 1zco_A 113 GARNSQNFELLKEVGK-----VENPVLLKRGMG--NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVP 185 (262)
T ss_dssp CGGGTTCHHHHHHHTT-----SSSCEEEECCTT--CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHH
T ss_pred CcccccCHHHHHHHHh-----cCCcEEEecCCC--CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHH
Confidence 6777888877666543 689999987663 25677888888889999855554 522 1112442 235777899
Q ss_pred HHHHHcCCCceEEEeCCCCC-H-----HHHHHHHhcCCCcCeeeecHH
Q 009196 366 QCARKASDDLQVLGNGDIYS-Y-----LDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 366 ~i~~~~~~~IPVIgNGdI~s-~-----eDa~~~l~~~~gaDgVMIGRg 407 (540)
.+++.. ++|||+.-+=.. . .-+..++. .||+|+||=+-
T Consensus 186 ~lk~~~--~~pVi~d~sH~~g~~~~v~~~~~aAva--~Ga~Gl~iE~H 229 (262)
T 1zco_A 186 VVKELS--HLPIIVDPSHPAGRRSLVIPLAKAAYA--IGADGIMVEVH 229 (262)
T ss_dssp HHHHHB--SSCEEECSSTTTCSGGGHHHHHHHHHH--TTCSEEEEEBC
T ss_pred HHHhhh--CCCEEEEcCCCCCccchHHHHHHHHHH--cCCCEEEEEec
Confidence 999987 689876433221 1 22344454 79999999854
No 375
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=92.92 E-value=0.47 Score=48.38 Aligned_cols=128 Identities=13% Similarity=0.161 Sum_probs=79.9
Q ss_pred EEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCC
Q 009196 246 VQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYF 323 (540)
Q Consensus 246 vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~ 323 (540)
.-+...+++.+.+.++ . .||..|-|..|.+ |.. ++.-.+.|+++++++ ++.+.|-.-.+|
T Consensus 74 ~ti~~~~~e~~~~~~~--~--~G~~~~KiKvg~~---------g~~----~~~d~~~v~avR~~~G~~~~L~vDaN~~w- 135 (327)
T 2opj_A 74 ATVPAVGPEEAARIVA--S--SGCTTAKVKVAER---------GQS----EANDVARVEAVRDALGPRGRVRIDVNGAW- 135 (327)
T ss_dssp EEECSCCHHHHHHHHH--H--HCCSEEEEECCC-------------------CHHHHHHHHHHHHCTTSEEEEECTTCS-
T ss_pred EEeCCCCHHHHHHHHH--H--CCCCEEEEEeCCC---------CCC----HHHHHHHHHHHHHHhCCCCEEEEECCCCC-
Confidence 3445567877655443 2 3999999987643 111 222346677777776 466777767777
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeee
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVM 403 (540)
+..++..+++.|++.++.+| +|.. .+++..+++++.+ ++||.+.=.+.+..++.++++. ..+|.|.
T Consensus 136 -~~~~A~~~~~~L~~~~l~~i-------EqP~---~~~~~~~~l~~~~--~iPIa~dEs~~~~~~~~~~i~~-~a~d~i~ 201 (327)
T 2opj_A 136 -DVDTAVRMIRLLDRFELEYV-------EQPC---ATVDELAEVRRRV--SVPIAADESIRRAEDPLRVRDA-EAADVVV 201 (327)
T ss_dssp -CHHHHHHHHHHHGGGCEEEE-------ECCS---SSHHHHHHHHHHC--SSCEEC-----------CTTTT-TCCSBEE
T ss_pred -CHHHHHHHHHHHHhcCCcEE-------eCCC---CCHHHHHHHHhhC--CCCEEcCCCCCCHHHHHHHHHh-CCCCEEE
Confidence 35788999999999887655 3433 2578888999888 6999999999999999887765 7789888
Q ss_pred ec
Q 009196 404 IA 405 (540)
Q Consensus 404 IG 405 (540)
+=
T Consensus 202 ik 203 (327)
T 2opj_A 202 LK 203 (327)
T ss_dssp EC
T ss_pred eC
Confidence 74
No 376
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=92.90 E-value=0.75 Score=46.97 Aligned_cols=124 Identities=17% Similarity=0.213 Sum_probs=92.4
Q ss_pred EecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCCh
Q 009196 247 QICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGK 326 (540)
Q Consensus 247 QL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~ 326 (540)
.+...+++.+++.++... + ||..|-|..|-. .-.+.|+++|++++..+.|-.--+|. +.
T Consensus 129 ~~~~~~~e~~~~~a~~~~-~-g~~~~K~Kvg~~------------------~d~~~v~avR~~~~~~l~vDaN~~~t-~~ 187 (338)
T 3ijl_A 129 TIGIDTPDVVRAKTKECA-G-LFNILKVKLGRD------------------NDKEMIETIRSVTDLPIAVDANQGWK-DR 187 (338)
T ss_dssp BCCCCCHHHHHHHHHHHH-T-TCSSEEEECSSS------------------CHHHHHHHHHTTCCCCEEEECTTCCC-CH
T ss_pred EEeCCCHHHHHHHHHHHH-h-cccEEEEecCcH------------------HHHHHHHHHHhhcCCcEEEECcCCCC-CH
Confidence 344568999988887765 3 899999876531 13466888888887777777777773 24
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.++.++++.|++.++.+| +|.. .+-|++..+++++.+ ++||.+.=.+.+..++.+++ ..+|.|++
T Consensus 188 ~~A~~~~~~l~~~~i~~i-------EeP~-~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~---~a~d~i~~ 252 (338)
T 3ijl_A 188 QYALDMIHWLKEKGIVMI-------EQPM-PKEQLDDIAWVTQQS--PLPVFADESLQRLGDVAALK---GAFTGINI 252 (338)
T ss_dssp HHHHHHHHHHHHTTEEEE-------ECCS-CTTCHHHHHHHHHTC--SSCEEESTTCCSGGGTGGGB---TTBSEEEE
T ss_pred HHHHHHHHHHhhCCCCEE-------ECCC-CCCcHHHHHHHHhcC--CCCEEECCCCCCHHHHHHHH---hhCCEEEe
Confidence 678999999999987665 4443 345789999999988 69999988999999987753 45787764
No 377
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.88 E-value=2.3 Score=40.59 Aligned_cols=174 Identities=11% Similarity=0.070 Sum_probs=100.0
Q ss_pred CCCCCHHHHHHHHHhCCCEEEeccceechhccC-Chhhhh-hhhcccC-CCeEEEEecCCcHHHHHHHHHHHHHhCCCCE
Q 009196 195 TTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQG-QASEWA-LLRRHSS-EDLFGVQICGAYPDTLARTVELIDQQCTVDF 271 (540)
Q Consensus 195 ~~vtdlpfR~l~~~~Gadl~~TEmi~a~~l~~g-~~~e~~-ll~~~~~-e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~ 271 (540)
+|+++.-=-+.+.+.|||++- ++...+--+. ...+-+ +.+.-+. -.+++| +...+++.+.+.++ .++.|.
T Consensus 6 CGit~~eda~~a~~~GaD~iG--fif~~~SpR~V~~~~a~~i~~~~~~~~~~VgV-fvn~~~~~i~~~~~----~~~ld~ 78 (203)
T 1v5x_A 6 CGITRLEDALLAEALGAFALG--FVLAPGSRRRIAPEAARAIGEALGPFVVRVGV-FRDQPPEEVLRLME----EARLQV 78 (203)
T ss_dssp CCCCCHHHHHHHHHHTCSEEE--EECCTTCTTBCCHHHHHHHHHHSCSSSEEEEE-ESSCCHHHHHHHHH----HTTCSE
T ss_pred cCCCcHHHHHHHHHcCCCEEE--EEecCCCCCcCCHHHHHHHHHhCCCCCCEEEE-EeCCCHHHHHHHHH----hhCCCE
Confidence 566776666777789998752 2211111011 111111 2222222 223444 33345555555443 568999
Q ss_pred EEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccc
Q 009196 272 IDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTR 351 (540)
Q Consensus 272 IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr 351 (540)
|.||. . ..++.+..+ .. ++|+.--+|..-..+ + .+....+|++.+...+
T Consensus 79 vQLHG-------------~---e~~~~~~~l----~~--~~~vika~~v~~~~~------l--~~~~~~~d~~LlD~~~- 127 (203)
T 1v5x_A 79 AQLHG-------------E---EPPEWAEAV----GR--FYPVIKAFPLEGPAR------P--EWADYPAQALLLDGKR- 127 (203)
T ss_dssp EEECS-------------C---CCHHHHHHH----TT--TSCEEEEEECSSSCC------G--GGGGSSCSEEEEECSS-
T ss_pred EEECC-------------C---CCHHHHHHh----cc--CCCEEEEEEcCChHh------h--hhhhcCCCEEEEcCCC-
Confidence 99982 1 245554443 21 567765566542221 1 1233348999887543
Q ss_pred cCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 352 QQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 352 ~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
++.....||+.+..+.. . +.|+|..||+ +++.+.+++ . .++.||=+..|.=..|-
T Consensus 128 -gGtG~~fdW~~l~~~~~-~--~~p~~LAGGL-~peNV~~ai-~-~~p~gVDvsSGvE~~pG 182 (203)
T 1v5x_A 128 -PGSGEAYPRAWAKPLLA-T--GRRVILAGGI-APENLEEVL-A-LRPYALDLASGVEEAPG 182 (203)
T ss_dssp -TTSCCCCCGGGGHHHHH-T--TSCEEECSSC-CSTTHHHHH-H-HCCSEEEESGGGEEETT
T ss_pred -CCCCCccCHHHHHhhhc-c--CCcEEEECCC-CHHHHHHHH-h-cCCCEEEeCCceecCCC
Confidence 34444579998876322 2 5799999999 888887777 5 68999999998865554
No 378
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=92.85 E-value=1.6 Score=44.43 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=71.3
Q ss_pred CCccccccCCchHHHHHHHHhcccccccEEEEec-CCCCCCh----------hHHHHHHHHHHHcCCcEEEEecccccCc
Q 009196 286 KGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR-TGYFEGK----------NRIDSLIADIGTWGASAVTVHGRTRQQR 354 (540)
Q Consensus 286 ~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR-~G~~e~~----------~~~~~la~~leeaGvdaItVHgRtr~q~ 354 (540)
||.--.+..|-+...++++.+... ++.|-.-+- +|-.++. .+..+..+.+++.|+|+|.+.-.|..+.
T Consensus 102 DgS~~p~eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~ 180 (305)
T 1rvg_A 102 DKSHEDFETNVRETRRVVEAAHAV-GVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGA 180 (305)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHT-TCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccc
Confidence 333334556667777777776543 444444332 2221210 2344555566778999998877776677
Q ss_pred cC--C--CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhc
Q 009196 355 YS--K--LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSD 395 (540)
Q Consensus 355 y~--g--~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~ 395 (540)
|. + ..+++.+++|++.+ ++|++.-|+=.=++++.+++.+
T Consensus 181 Yk~~g~p~L~~~~L~~I~~~~--~vpLVlHGgSsv~~~~~~~~~~ 223 (305)
T 1rvg_A 181 YKGKGRPFIDHARLERIARLV--PAPLVLHGASAVPPELVERFRA 223 (305)
T ss_dssp BCSSSSCCCCHHHHHHHHHHC--CSCEEECSCCCCCHHHHHHHHH
T ss_pred cCCCCCCccCHHHHHHHHHhc--CCCEEEeCCCCCcHHHHHHHHh
Confidence 76 3 35799999999999 6999999998778888887776
No 379
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=92.82 E-value=0.14 Score=55.37 Aligned_cols=71 Identities=11% Similarity=0.118 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
...+.+..+.++|++.|.||... ++. ...|+.++.+++.++ ++||++ |+|.+.+++..+.+ .|||+|.+|.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~---G~~-~~~~~~i~~i~~~~~-~~pvi~-~~v~t~~~a~~l~~--aGad~I~vg~ 325 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQ---GNS-VYQIAMVHYIKQKYP-HLQVIG-GNVVTAAQAKNLID--AGVDGLRVGM 325 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC---CCS-HHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHH--HTCSEEEECS
T ss_pred hhHHHHHHHHHcCCCEEEeeccC---Ccc-hhHHHHHHHHHHhCC-CCceEe-cccchHHHHHHHHH--cCCCEEEECC
Confidence 35677888899999999998642 221 134788999999986 699986 78999999998765 7999998854
No 380
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=92.81 E-value=0.46 Score=46.31 Aligned_cols=83 Identities=14% Similarity=0.026 Sum_probs=55.8
Q ss_pred HHHHHcCCcEEEEecccccCccC--CCcCHHHHH---HHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 334 ADIGTWGASAVTVHGRTRQQRYS--KLADWDYIY---QCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 334 ~~leeaGvdaItVHgRtr~q~y~--g~adw~~I~---~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
+.+...+...|-+-+|...+.-. ..+.-+.+. ++.+.++.+++|+.-|+|.+.+++..+.. .|+||+.||.++
T Consensus 128 ~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~~--~giDG~LVG~a~ 205 (226)
T 1w0m_A 128 LAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALR--LGTRGVLLASAA 205 (226)
T ss_dssp HHHHHTCCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHH--TTCSEEEECHHH
T ss_pred HHHhcCCCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHHh--CCCCEEEECHHH
Confidence 34566788888887776443210 133334333 23333344799999999999999888654 799999999998
Q ss_pred HhCCCchHHH
Q 009196 409 LIKPWIFTEI 418 (540)
Q Consensus 409 L~nPwif~ei 418 (540)
|.-+.+..-+
T Consensus 206 l~a~~~~~~i 215 (226)
T 1w0m_A 206 VKAKDPYAKI 215 (226)
T ss_dssp HTCSSHHHHH
T ss_pred HCCcCHHHHH
Confidence 8766655444
No 381
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=92.74 E-value=0.57 Score=47.46 Aligned_cols=97 Identities=14% Similarity=0.090 Sum_probs=69.5
Q ss_pred CCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCC
Q 009196 294 TKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASD 373 (540)
Q Consensus 294 ~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~ 373 (540)
..++.+.+.++.+++.++.|+.|-+-....-......+.++.+.+.|++.|++|... .++++..+++.
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~---------p~~~~~~l~~~--- 117 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND---------PGEHIAEFRRH--- 117 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC---------CHHHHHHHHHT---
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC---------cHHHHHHHHHc---
Confidence 347788888888887777787775543210001235677888899999999999631 16778888764
Q ss_pred CceEEEeCCCCCHHHHHHHHhcCCCcCeeee-cH
Q 009196 374 DLQVLGNGDIYSYLDWNKHKSDCPELASCMI-AR 406 (540)
Q Consensus 374 ~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI-GR 406 (540)
.+||+. ++.+.+++..+.. .|+|+|.+ |+
T Consensus 118 gi~vi~--~v~t~~~a~~~~~--~GaD~i~v~g~ 147 (328)
T 2gjl_A 118 GVKVIH--KCTAVRHALKAER--LGVDAVSIDGF 147 (328)
T ss_dssp TCEEEE--EESSHHHHHHHHH--TTCSEEEEECT
T ss_pred CCCEEe--eCCCHHHHHHHHH--cCCCEEEEECC
Confidence 589885 4889999988665 79999988 54
No 382
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=92.73 E-value=0.97 Score=46.30 Aligned_cols=84 Identities=10% Similarity=0.177 Sum_probs=57.1
Q ss_pred HHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 301 GIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 301 eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+.++++++.. ..|+.|-+.. .++ +..+.++|+|.|-+..- +.+.++++++.+..+++|.+
T Consensus 220 ~Av~~ar~~~p~~kIeVEVdt-----lde----a~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~iea 280 (320)
T 3paj_A 220 QAISTAKQLNPGKPVEVETET-----LAE----LEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALEN 280 (320)
T ss_dssp HHHHHHHHHSTTSCEEEEESS-----HHH----HHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHhCCCCeEEEEECC-----HHH----HHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEE
Confidence 3444455443 3466664432 222 33445589999999752 34667777766644799999
Q ss_pred eCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 380 NGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 380 NGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
+||| +.+.+.++.+ +|+|.+.+|.
T Consensus 281 SGGI-t~~~I~~~a~--tGVD~isvGa 304 (320)
T 3paj_A 281 SGNI-TLDNLKECAE--TGVDYISVGA 304 (320)
T ss_dssp ESSC-CHHHHHHHHT--TTCSEEECTH
T ss_pred ECCC-CHHHHHHHHH--cCCCEEEECc
Confidence 9999 7888888664 8999999996
No 383
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=92.64 E-value=0.33 Score=48.89 Aligned_cols=93 Identities=8% Similarity=0.011 Sum_probs=59.6
Q ss_pred HHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCH-HHHHHHHHHcCCCceEE
Q 009196 301 GIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADW-DYIYQCARKASDDLQVL 378 (540)
Q Consensus 301 eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw-~~I~~i~~~~~~~IPVI 378 (540)
+.++++++.. ..++.|-+.. .+-++.+.++|+|.|-+|.-+. .+. ..++.++...+ +++|.
T Consensus 183 ~av~~ar~~~~~~~I~Vev~t---------~eea~eal~aGaD~I~LDn~~~-------~~~~~~v~~l~~~~~-~v~ie 245 (284)
T 1qpo_A 183 DALRAVRNAAPDLPCEVEVDS---------LEQLDAVLPEKPELILLDNFAV-------WQTQTAVQRRDSRAP-TVMLE 245 (284)
T ss_dssp HHHHHHHHHCTTSCEEEEESS---------HHHHHHHGGGCCSEEEEETCCH-------HHHHHHHHHHHHHCT-TCEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCC---------HHHHHHHHHcCCCEEEECCCCH-------HHHHHHHHHhhccCC-CeEEE
Confidence 4455555543 2266665542 2334455668999999997422 111 23444444333 68999
Q ss_pred EeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCC
Q 009196 379 GNGDIYSYLDWNKHKSDCPELASCMIARGALIKPW 413 (540)
Q Consensus 379 gNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPw 413 (540)
++||| +++.+.++.+ +|+|.+.+|+....-|+
T Consensus 246 aSGGI-t~~~i~~~a~--tGVD~isvG~l~~~a~~ 277 (284)
T 1qpo_A 246 SSGGL-SLQTAATYAE--TGVDYLAVGALTHSVRV 277 (284)
T ss_dssp EESSC-CTTTHHHHHH--TTCSEEECGGGTSSBCC
T ss_pred EECCC-CHHHHHHHHh--cCCCEEEECHHHcCCCC
Confidence 99999 7899988665 89999999975544454
No 384
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=92.54 E-value=1.9 Score=44.32 Aligned_cols=130 Identities=11% Similarity=-0.012 Sum_probs=83.9
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
|.+.+.+-++.+. +.|+|+|=++. ..|-+..-..+.-.++++. ...-.+||.+-+.. .+..++++
T Consensus 45 D~~~l~~lv~~li-~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg~---~st~eai~ 109 (344)
T 2hmc_A 45 DFDALVRKGKELI-ADGMSAVVYCG----------SMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTGA---VNTASAVA 109 (344)
T ss_dssp CHHHHHHHHHHHH-HTTCCCEEESS----------GGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECCC---SSHHHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeCc----------cCcChhhCCHHHHHHHHHH-HhCCCCcEEEecCC---CCHHHHHH
Confidence 5677888888877 57999998863 1222222233333455555 11126899885532 25678999
Q ss_pred HHHHHHHcCCcEEEEecccccCccCC-Cc---CHHHHHHHHH-HcCCCceEEE-e----CCCCCHHHHHHHHhcCCCcCe
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSK-LA---DWDYIYQCAR-KASDDLQVLG-N----GDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g-~a---dw~~I~~i~~-~~~~~IPVIg-N----GdI~s~eDa~~~l~~~~gaDg 401 (540)
+++.++++|+|++.+.. ..|.+ +. -+++++.|++ .+ ++|||. | |--.+++.+.+++.+++++-|
T Consensus 110 la~~A~~~Gadavlv~~----P~y~~~~s~~~l~~~f~~IA~aa~--~lPiilYn~P~tg~~l~~e~~~~L~a~~pnIvG 183 (344)
T 2hmc_A 110 HAVHAQKVGAKGLMVIP----RVLSRGSVIAAQKAHFKAILSAAP--EIPAVIYNSPYYGFATRADLFFALRAEHKNLVG 183 (344)
T ss_dssp HHHHHHHHTCSEEEECC----CCSSSTTCHHHHHHHHHHHHHHST--TSCEEEEEBGGGTBCCCHHHHHHHHHHCTTEEE
T ss_pred HHHHHHhcCCCEEEECC----CccCCCCCHHHHHHHHHHHHhhCC--CCcEEEEecCccCCCcCHHHHHHHHhcCCCEEE
Confidence 99999999999998852 23433 22 2567888988 66 688764 5 544588988886233355555
Q ss_pred e
Q 009196 402 C 402 (540)
Q Consensus 402 V 402 (540)
|
T Consensus 184 i 184 (344)
T 2hmc_A 184 F 184 (344)
T ss_dssp E
T ss_pred E
Confidence 4
No 385
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=92.44 E-value=2 Score=44.48 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=69.1
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGT 338 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~lee 338 (540)
++..+. +.|+|.+-| ||.=+++..++..+- ..++||.+|.-++ +.++....+..+.+
T Consensus 103 svd~l~-~~~v~~~KI--------------~S~~~~N~pLL~~va-----~~gKPviLstGms---tl~Ei~~Ave~i~~ 159 (350)
T 3g8r_A 103 SVDLIE-AHGIEIIKI--------------ASCSFTDWPLLERIA-----RSDKPVVASTAGA---RREDIDKVVSFMLH 159 (350)
T ss_dssp HHHHHH-HTTCCEEEE--------------CSSSTTCHHHHHHHH-----TSCSCEEEECTTC---CHHHHHHHHHHHHT
T ss_pred HHHHHH-HcCCCEEEE--------------CcccccCHHHHHHHH-----hhCCcEEEECCCC---CHHHHHHHHHHHHH
Confidence 344454 457777777 566678888777654 2589999977663 56777778888888
Q ss_pred cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe
Q 009196 339 WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN 380 (540)
Q Consensus 339 aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN 380 (540)
.|.+.+.+|+-+.........|+..|..+++.+| ++||..+
T Consensus 160 ~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp-~lpVG~S 200 (350)
T 3g8r_A 160 RGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYA-GVRIGYS 200 (350)
T ss_dssp TTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCT-TSEEEEE
T ss_pred cCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCC-CCCEEcC
Confidence 8988777787543222223458899999999986 5998766
No 386
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.42 E-value=0.17 Score=54.82 Aligned_cols=69 Identities=7% Similarity=0.101 Sum_probs=55.0
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
..+.++.+.++|++.|.|+.... . ....++.++++++.++ ++||++ |.|.+.+++..+.+ .|||+|.+|
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g---~-~~~~~~~i~~ir~~~p-~~~Vi~-g~v~t~e~a~~l~~--aGaD~I~Vg 300 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHG---H-SEGVLQRIRETRAAYP-HLEIIG-GNVATAEGARALIE--AGVSAVKVG 300 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCT---T-SHHHHHHHHHHHHHCT-TCCEEE-EEECSHHHHHHHHH--HTCSEEEEC
T ss_pred hHHHHHHHHhccCceEEeccccc---c-chHHHHHHHHHHHHCC-CceEEE-cccCcHHHHHHHHH--hCCCEEEEC
Confidence 46778889999999999985532 1 1234688999999987 689987 88999999988776 799999986
No 387
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=92.30 E-value=0.41 Score=44.77 Aligned_cols=83 Identities=10% Similarity=0.045 Sum_probs=62.1
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHH
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWN 390 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~ 390 (540)
..|+.+=+|.. +.+++.++++.+.+.|++.|.+|.++. .-.+.+..+++.++.+ .+|+.|-+.+++++.
T Consensus 9 ~~~~i~~~~~~---~~~~~~~~~~~~~~~G~~~iev~~~~~-------~~~~~i~~ir~~~~~~-~~ig~~~v~~~~~~~ 77 (205)
T 1wa3_A 9 KHKIVAVLRAN---SVEEAKEKALAVFEGGVHLIEITFTVP-------DADTVIKELSFLKEKG-AIIGAGTVTSVEQCR 77 (205)
T ss_dssp HHCEEEEECCS---SHHHHHHHHHHHHHTTCCEEEEETTST-------THHHHHHHTHHHHHTT-CEEEEESCCSHHHHH
T ss_pred hCCEEEEEecC---CHHHHHHHHHHHHHCCCCEEEEeCCCh-------hHHHHHHHHHHHCCCC-cEEEecccCCHHHHH
Confidence 35777767752 457889999999999999999997642 1235688888876422 356777889999998
Q ss_pred HHHhcCCCcCeeeecHH
Q 009196 391 KHKSDCPELASCMIARG 407 (540)
Q Consensus 391 ~~l~~~~gaDgVMIGRg 407 (540)
.+++ .|||.| ++-+
T Consensus 78 ~a~~--~Gad~i-v~~~ 91 (205)
T 1wa3_A 78 KAVE--SGAEFI-VSPH 91 (205)
T ss_dssp HHHH--HTCSEE-ECSS
T ss_pred HHHH--cCCCEE-EcCC
Confidence 8876 699999 7644
No 388
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=92.28 E-value=0.7 Score=46.70 Aligned_cols=109 Identities=9% Similarity=0.080 Sum_probs=71.0
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCC-CcCHHHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSK-LADWDYIYQC 367 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g-~adw~~I~~i 367 (540)
||..+++.+++.++ . .+++||.+|.-+.- +..++...+..+...|..-+++.-|...-.|.. ..|+..+..+
T Consensus 115 gA~~~~n~~Ll~~~----a-~~~kPV~lk~G~~~--t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~l 187 (292)
T 1o60_A 115 PAFLARQTDLVEAM----A-KTGAVINVKKPQFL--SPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVM 187 (292)
T ss_dssp CGGGTTCHHHHHHH----H-HTTCEEEEECCTTS--CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHH
T ss_pred CcccccCHHHHHHH----H-cCCCcEEEeCCCCC--CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHH
Confidence 78888998865554 3 35899999887632 345777778888999986666554533223321 1588889999
Q ss_pred HHHcCCCceEEEe---------------CCCCC--HHHHHHHHhcCCCcCeeeecHH
Q 009196 368 ARKASDDLQVLGN---------------GDIYS--YLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 368 ~~~~~~~IPVIgN---------------GdI~s--~eDa~~~l~~~~gaDgVMIGRg 407 (540)
++..+ ++||+.. ++... ..-+..++. .||+|+||=+-
T Consensus 188 k~~~~-~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva--~Ga~Gl~IE~H 241 (292)
T 1o60_A 188 KKASK-GSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLA--VGIAGLFLEAH 241 (292)
T ss_dssp HHHTT-SCCEEEEHHHHCC------------CTTHHHHHHHHHH--HCCSEEEEEEE
T ss_pred HhhCC-CCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHH--cCCCEEEEEec
Confidence 88864 4899882 22211 123334454 69999999754
No 389
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=92.24 E-value=0.69 Score=46.94 Aligned_cols=106 Identities=14% Similarity=0.075 Sum_probs=70.9
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC-cCHHHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL-ADWDYIYQC 367 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~-adw~~I~~i 367 (540)
||..+++.+++.++- .+++||.+|.-++. +..+....+..+.+.|..-|++--|+-.-.|... .|+..|..+
T Consensus 138 gA~~~~n~~LLr~va-----~~gkPVilK~Gms~--t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~l 210 (298)
T 3fs2_A 138 PAFLCRQTDLLIAAA-----RTGRVVNVKKGQFL--APWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIM 210 (298)
T ss_dssp CGGGTTCHHHHHHHH-----HTTSEEEEECCTTC--CGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHH
T ss_pred CccccCCHHHHHHHH-----ccCCcEEEeCCCCC--CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHH
Confidence 788889988665532 35899999887632 4456778888899999887776434322234332 588899999
Q ss_pred HHHcCCCceEEEe---------------CCCCC--HHHHHHHHhcCCCcCeeeecH
Q 009196 368 ARKASDDLQVLGN---------------GDIYS--YLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 368 ~~~~~~~IPVIgN---------------GdI~s--~eDa~~~l~~~~gaDgVMIGR 406 (540)
++ + ++||++. ||.+. +.-+..++. .||||+||=+
T Consensus 211 k~-~--~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAvA--lGAdGl~IE~ 261 (298)
T 3fs2_A 211 AG-L--GAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVA--VGVAGFFIET 261 (298)
T ss_dssp HT-T--TSCEEEEHHHHTCCCC--------CGGGHHHHHHHHHH--HCCSEEEEEE
T ss_pred HH-c--CCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHHH--cCCCEEEEEe
Confidence 88 7 7999983 33222 223445555 6899999863
No 390
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=92.19 E-value=1.1 Score=43.21 Aligned_cols=141 Identities=12% Similarity=-0.043 Sum_probs=82.7
Q ss_pred eEEEEecCCc-HHHHHHHHHHHHHhCCCCEEEecCCCC-CcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC
Q 009196 243 LFGVQICGAY-PDTLARTVELIDQQCTVDFIDINMGCP-IDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G~~-p~~~a~AA~~~~~~aG~D~IDIN~GCP-~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~ 320 (540)
+++.=+=-.| |.....+++.+. +. |.|.+|.... .+ -+...+++..+ .+.-|+|=.++
T Consensus 55 ~VflDlK~~DI~nTv~~~~~~~~-~~--d~vTVh~~~G~~~----------------~~~~a~~~~~~-~~~~v~vLts~ 114 (222)
T 4dbe_A 55 EIIVDFKLADIGYIMKSIVERLS-FA--NSFIAHSFIGVKG----------------SLDELKRYLDA-NSKNLYLVAVM 114 (222)
T ss_dssp EEEEEEEECSCHHHHHHHHTTCT-TC--SEEEEESTTCTTT----------------THHHHHHHHHH-TTCEEEEEEEC
T ss_pred eEEEEeeecchHHHHHHHHHHHH-hC--CEEEEEcCcCcHH----------------HHHHHHHHHHh-cCCcEEEEEeC
Confidence 5655444343 566666666554 33 9999985332 11 12223333221 12235554455
Q ss_pred CCCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHH-HHHHHHhcCCC
Q 009196 321 GYFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYL-DWNKHKSDCPE 398 (540)
Q Consensus 321 G~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~e-Da~~~l~~~~g 398 (540)
+..+. ......+++.++++|++.+.+.+. .-+.+..+++.++ + .++..+||.-.. +..+++. .|
T Consensus 115 s~~~~~~~~~~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~-~-~~~vtPGI~~~g~tp~~a~~--~G 180 (222)
T 4dbe_A 115 SHEGWSTLFADYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFE-K-MTIVSPGMGSQGGSYGDAVC--AG 180 (222)
T ss_dssp SSTTCCCTTHHHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCT-T-CEEEECCBSTTSBCTTHHHH--HT
T ss_pred CCcchHHHHHHHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCC-C-CEEEcCCcccCccCHHHHHH--cC
Confidence 33221 122367889999999999987431 1245788888886 4 677788886321 3334454 68
Q ss_pred cCeeeecHHHHhCCCchHH
Q 009196 399 LASCMIARGALIKPWIFTE 417 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~e 417 (540)
+|.+.|||+.+.-+.-...
T Consensus 181 ad~iVVGR~I~~A~dP~~a 199 (222)
T 4dbe_A 181 ADYEIIGRSIYNAGNPLTA 199 (222)
T ss_dssp CSEEEECHHHHTSSSHHHH
T ss_pred CCEEEECHHhcCCCCHHHH
Confidence 9999999999986554433
No 391
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=92.13 E-value=1.2 Score=45.72 Aligned_cols=107 Identities=10% Similarity=0.040 Sum_probs=69.1
Q ss_pred CCccccccCCchHHHHHHHHhcccccccEEEEec-CCCCCC----h---hHHHHHHHHHHHcCCcEEEEecccccCccC-
Q 009196 286 KGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR-TGYFEG----K---NRIDSLIADIGTWGASAVTVHGRTRQQRYS- 356 (540)
Q Consensus 286 ~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR-~G~~e~----~---~~~~~la~~leeaGvdaItVHgRtr~q~y~- 356 (540)
||.--.+..|-+...++++.+... ++.|-.-+- +|-.++ . .+..+..+.+++.|+|.|.+.-.|..+.|.
T Consensus 105 DgS~~p~eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~ 183 (323)
T 2isw_A 105 DASHHPFDENVRITKEVVAYAHAR-SVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKF 183 (323)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTT-TCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHc-CCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccccCC
Confidence 333334556667777777777543 444433332 221111 0 234455556677899999887777667776
Q ss_pred -CC----cCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhc
Q 009196 357 -KL----ADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSD 395 (540)
Q Consensus 357 -g~----adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~ 395 (540)
+. .+++.+++|++.+ ++|++.-|+=.-++++.+.+.+
T Consensus 184 ~~~p~~~L~~~~L~~I~~~~--~vpLVlHGgSsvp~~~~~~~~~ 225 (323)
T 2isw_A 184 KSESDIRLAIDRVKTISDLT--GIPLVMHGSSSVPKDVKDMINK 225 (323)
T ss_dssp CC----CCCCHHHHHHHHHH--CSCEEECSCCCCCHHHHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHh--CCCeEEECCCCCCHHHHHHHHH
Confidence 33 5689999999999 7999999988777777777765
No 392
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=92.11 E-value=0.56 Score=48.29 Aligned_cols=138 Identities=10% Similarity=0.084 Sum_probs=80.2
Q ss_pred HHHHHHhCCCCEEEecCCCCCcccccCCcccc----cc-CCchHHHHHHHHhcccccccEEEEe--cC-CCCC--C----
Q 009196 260 VELIDQQCTVDFIDINMGCPIDIVVNKGAGSC----LL-TKPMRMKGIIEATSGTVDKPITIKV--RT-GYFE--G---- 325 (540)
Q Consensus 260 A~~~~~~aG~D~IDIN~GCP~~~v~~~G~Gsa----Ll-~~p~~l~eIv~av~~~v~iPVtVKi--R~-G~~e--~---- 325 (540)
++.+. +.|+|+|-+.+- +|+. +- .....+.+|.+++++ .++|+.+=+ +. +..+ +
T Consensus 116 ve~a~-~~GADAVk~lv~----------~g~d~~~e~~~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~~~~~~~~~a 183 (332)
T 3iv3_A 116 IKRLK-EAGADAVKFLLY----------YDVDGDPQVNVQKQAYIERIGSECQA-EDIPFFLEILTYDETISNNSSVEFA 183 (332)
T ss_dssp HHHHH-HTTCSEEEEEEE----------ECTTSCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTBSCTTSHHHH
T ss_pred HHHHH-HcCCCEEEEEEE----------cCCCchHHHHHHHHHHHHHHHHHHHH-cCCceEEEEeccCCCCCCCcchhhh
Confidence 45555 679999887631 1110 00 123345555555533 489988854 22 2111 1
Q ss_pred ---hhHHHHHHHHH--HHcCCcEEEEec-ccc---------cCccCCCcCHHHHHHHHHHcCCCceEE-EeCCCCCHHHH
Q 009196 326 ---KNRIDSLIADI--GTWGASAVTVHG-RTR---------QQRYSKLADWDYIYQCARKASDDLQVL-GNGDIYSYLDW 389 (540)
Q Consensus 326 ---~~~~~~la~~l--eeaGvdaItVHg-Rtr---------~q~y~g~adw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa 389 (540)
...+...++.+ .+.|+|.+-+-- .+. +--|+.....+.++++.+.+ ++|+| .+||+ +.+++
T Consensus 184 ~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~--~~P~v~lsgG~-~~~~f 260 (332)
T 3iv3_A 184 KVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEAST--DLPYIYLSAGV-SAELF 260 (332)
T ss_dssp TTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTC--SSCEEEECTTC-CHHHH
T ss_pred ccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcC--CCCEEEECCCC-CHHHH
Confidence 12255666777 567999998741 110 11232222234577777777 69965 79998 66677
Q ss_pred HHHHhc--CCCc--CeeeecHHHHhCC
Q 009196 390 NKHKSD--CPEL--ASCMIARGALIKP 412 (540)
Q Consensus 390 ~~~l~~--~~ga--DgVMIGRgaL~nP 412 (540)
.+.+.. ..|| .||.+||....+.
T Consensus 261 l~~v~~A~~aGa~f~Gv~~GRnvwq~~ 287 (332)
T 3iv3_A 261 QETLVFAHKAGAKFNGVLCGRATWAGS 287 (332)
T ss_dssp HHHHHHHHHHTCCCCEEEECHHHHTTH
T ss_pred HHHHHHHHHcCCCcceEEeeHHHHHhh
Confidence 665532 1688 9999999987663
No 393
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=92.09 E-value=0.83 Score=43.60 Aligned_cols=134 Identities=11% Similarity=0.082 Sum_probs=90.8
Q ss_pred cCCCeEEEEecCCc----HH--HHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccc
Q 009196 239 SSEDLFGVQICGAY----PD--TLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDK 312 (540)
Q Consensus 239 ~~e~p~~vQL~G~~----p~--~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~i 312 (540)
..+-++++|..... ++ .+.+.|+.+. ++|+++|.++ .+ +.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~-~~G~~~i~~~-------------------~~----~~i~~i~~~~~~ 70 (234)
T 1yxy_A 15 KGGIIVSCQALPGEPLYSETGGIMPLMAKAAQ-EAGAVGIRAN-------------------SV----RDIKEIQAITDL 70 (234)
T ss_dssp TTSCEEECCCCTTSTTCCTTCCSHHHHHHHHH-HHTCSEEEEE-------------------SH----HHHHHHHTTCCS
T ss_pred hCCEEEEeeCCCCCCCcCCccchHHHHHHHHH-HCCCcEeecC-------------------CH----HHHHHHHHhCCC
Confidence 45567778887755 66 7777777776 6799999886 12 447777787899
Q ss_pred cEEEEecCCCCCC---hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHH
Q 009196 313 PITIKVRTGYFEG---KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDW 389 (540)
Q Consensus 313 PVtVKiR~G~~e~---~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa 389 (540)
||..-++.++.+. .....+.++.+.++|++.|++|...... ..+....+.+..+++.++ +++|+. ++.+++++
T Consensus 71 p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~~~~-~~~~~~~~~i~~i~~~~~-~~~v~~--~~~t~~ea 146 (234)
T 1yxy_A 71 PIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTKRDR-HDGLDIASFIRQVKEKYP-NQLLMA--DISTFDEG 146 (234)
T ss_dssp CEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCSSCC-TTCCCHHHHHHHHHHHCT-TCEEEE--ECSSHHHH
T ss_pred CEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccccCC-CCCccHHHHHHHHHHhCC-CCeEEE--eCCCHHHH
Confidence 9832233332111 1123456778889999999999754321 111123578899998875 577665 68899999
Q ss_pred HHHHhcCCCcCee
Q 009196 390 NKHKSDCPELASC 402 (540)
Q Consensus 390 ~~~l~~~~gaDgV 402 (540)
..+.. .|+|.|
T Consensus 147 ~~a~~--~Gad~i 157 (234)
T 1yxy_A 147 LVAHQ--AGIDFV 157 (234)
T ss_dssp HHHHH--TTCSEE
T ss_pred HHHHH--cCCCEE
Confidence 88766 799998
No 394
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.05 E-value=0.23 Score=53.31 Aligned_cols=70 Identities=7% Similarity=0.032 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 328 RIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 328 ~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
...+.+..+.++|++.|.+|... ++ ....|+.++.+++.++ ++||+. |++.+.+++..+.+ .|+|+|.+|
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~---G~-~~~~~e~i~~i~~~~p-~~pvi~-g~~~t~e~a~~l~~--~G~d~I~v~ 306 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAH---GH-SRRVIETLEMIKADYP-DLPVVA-GNVATPEGTEALIK--AGADAVKVG 306 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC---CS-SHHHHHHHHHHHHHCT-TSCEEE-EEECSHHHHHHHHH--TTCSEEEEC
T ss_pred hHHHHHHHHHHhCCCEEEEEecC---Cc-hHHHHHHHHHHHHHCC-CceEEe-CCcCCHHHHHHHHH--cCCCEEEEc
Confidence 35677888999999999997532 11 1235889999999986 599876 77899999988665 799999984
No 395
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=92.05 E-value=5.3 Score=39.53 Aligned_cols=145 Identities=11% Similarity=0.029 Sum_probs=82.8
Q ss_pred CCeEEEEec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc--cc--cc--
Q 009196 241 EDLFGVQIC-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT--VD--KP-- 313 (540)
Q Consensus 241 e~p~~vQL~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~--v~--iP-- 313 (540)
+.++++=+= +--|.....+++.+. ++|+|.|.+|. +|+ .+-+...++++.+. .+ .|
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~-~~gad~vTVh~-----------~~G-----~~~~~aa~~~~~~~~~~g~~~~~l 118 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALA-KLGITFTTVHA-----------LGG-----SQMIKSAKDGLIAGTPAGHSVPKL 118 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHH-TTTCSEEEEEG-----------GGC-----HHHHHHHHHHHHHHSCTTSCCCEE
T ss_pred CCcEEEEecccccchHHHHHHHHHH-hcCCCEEEEcC-----------CCC-----HHHHHHHHHHHHHhcccCCCCceE
Confidence 455554443 334677777887776 78999999984 222 22333344443321 01 22
Q ss_pred EEE--EecCC---------CCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC
Q 009196 314 ITI--KVRTG---------YFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG 381 (540)
Q Consensus 314 VtV--KiR~G---------~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG 381 (540)
+.| =...+ ...+ .+.+..+++...++|++.+...+ ..+..+++.++ +-.++..+
T Consensus 119 i~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~-------------~e~~~ir~~~~-~~f~~vtP 184 (259)
T 3tfx_A 119 LAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSP-------------LEVKKLHENIG-DDFLYVTP 184 (259)
T ss_dssp EEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCG-------------GGHHHHHHHHC-SSSEEEEC
T ss_pred EEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECH-------------HHHHHHHhhcC-CccEEEcC
Confidence 122 11111 1111 13456788888899999998631 12566666664 33466677
Q ss_pred CCCCHH----H------HHHHHhcCCCcCeeeecHHHHhCCCchHHH
Q 009196 382 DIYSYL----D------WNKHKSDCPELASCMIARGALIKPWIFTEI 418 (540)
Q Consensus 382 dI~s~e----D------a~~~l~~~~gaDgVMIGRgaL~nPwif~ei 418 (540)
||.-.. | ..+++. .|+|.+.+||+.+..+.....+
T Consensus 185 GIr~~g~~~gDQ~Rv~T~~~a~~--aGad~iVvGr~I~~a~dp~~a~ 229 (259)
T 3tfx_A 185 GIRPAGNAKDDQSRVATPKMAKE--WGSSAIVVGRPITLASDPKAAY 229 (259)
T ss_dssp CCCCC-----------CHHHHHH--TTCSEEEECHHHHTSSSHHHHH
T ss_pred CcCCCCCCcCCccccCCHHHHHH--cCCCEEEEChHHhCCCCHHHHH
Confidence 775321 1 444454 7999999999999866544433
No 396
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.99 E-value=1.4 Score=43.87 Aligned_cols=148 Identities=9% Similarity=-0.038 Sum_probs=84.3
Q ss_pred EEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCC---
Q 009196 246 VQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGY--- 322 (540)
Q Consensus 246 vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~--- 322 (540)
+++...+.+.+. .+. ++|++.|-|-.+. .+...+...+.......+.+.++++.+++. +++|.+-+..-+
T Consensus 75 v~~l~~n~~~i~----~a~-~~G~~~V~i~~~~-S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e 147 (295)
T 1ydn_A 75 YSVLVPNMKGYE----AAA-AAHADEIAVFISA-SEGFSKANINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECP 147 (295)
T ss_dssp EEEECSSHHHHH----HHH-HTTCSEEEEEEES-CHHHHHHHTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEET
T ss_pred EEEEeCCHHHHH----HHH-HCCCCEEEEEEec-CHHHHHHHcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCC
Confidence 344445554443 333 5799988874321 111111111222334455666666666553 566654344321
Q ss_pred ---CCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC--CCC-CHHHHHHHHhcC
Q 009196 323 ---FEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG--DIY-SYLDWNKHKSDC 396 (540)
Q Consensus 323 ---~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG--dI~-s~eDa~~~l~~~ 396 (540)
.-+.+.+.++++.+.+.|++.|.|..- .+..++....+.++.+++.++ .+|+..-| |.- ....+..+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt--~G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~an~l~Ai~-- 222 (295)
T 1ydn_A 148 YDGPVTPQAVASVTEQLFSLGCHEVSLGDT--IGRGTPDTVAAMLDAVLAIAP-AHSLAGHYHDTGGRALDNIRVSLE-- 222 (295)
T ss_dssp TTEECCHHHHHHHHHHHHHHTCSEEEEEET--TSCCCHHHHHHHHHHHHTTSC-GGGEEEEEBCTTSCHHHHHHHHHH--
T ss_pred cCCCCCHHHHHHHHHHHHhcCCCEEEecCC--CCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCcchHHHHHHHHHH--
Confidence 124578899999999999999999742 122233335678888888874 37877665 332 2344455565
Q ss_pred CCcCeeeec
Q 009196 397 PELASCMIA 405 (540)
Q Consensus 397 ~gaDgVMIG 405 (540)
.||+.|=+.
T Consensus 223 aG~~~vd~s 231 (295)
T 1ydn_A 223 KGLRVFDAS 231 (295)
T ss_dssp HTCCEEEEB
T ss_pred hCCCEEEec
Confidence 588887665
No 397
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=91.93 E-value=0.32 Score=49.45 Aligned_cols=119 Identities=12% Similarity=0.070 Sum_probs=74.9
Q ss_pred hCCCCEEE----ecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEE--e--cCCC---CC-ChhHHHHHH
Q 009196 266 QCTVDFID----INMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIK--V--RTGY---FE-GKNRIDSLI 333 (540)
Q Consensus 266 ~aG~D~ID----IN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVK--i--R~G~---~e-~~~~~~~la 333 (540)
+.|+|+|- ||.|.|... ...+.+.++++.+.+ .++|+.+= + |.|- ++ +.+.+...+
T Consensus 139 rlGADaV~~l~~i~~Gs~~e~-----------~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aa 206 (307)
T 3fok_A 139 DRGVDFAKTLVRINLSDAGTA-----------PTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSV 206 (307)
T ss_dssp HHTCCEEEEEEEECTTCTTHH-----------HHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETTEEEECCSHHHHHHHH
T ss_pred HCCCCEEEEEEEECCCChhHH-----------HHHHHHHHHHHHHHH-cCCcEEEEeeccccCCCCcCCCCCHHHHHHHH
Confidence 35899966 666666421 223445555555533 48888774 2 3121 11 334555566
Q ss_pred HHHHHcCCc----EEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC--CHHHHHHHHhc---CCCcCeeee
Q 009196 334 ADIGTWGAS----AVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY--SYLDWNKHKSD---CPELASCMI 404 (540)
Q Consensus 334 ~~leeaGvd----aItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~--s~eDa~~~l~~---~~gaDgVMI 404 (540)
+...+.|+| .|-+ .|+ +-++++.+.+ .+||+..||=. +.+++.+.+.. +.|+.||.+
T Consensus 207 RiAaELGADs~~tivK~-------~y~-----e~f~~Vv~a~--~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~v 272 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKL-------PVV-----EEMERVMEST--TMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTV 272 (307)
T ss_dssp HHHHTCSSCCSSEEEEE-------ECC-----TTHHHHGGGC--SSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEE
T ss_pred HHHHHhCCCcCCCEEEe-------CCc-----HHHHHHHHhC--CCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEee
Confidence 777899999 7766 233 3357888877 58988777765 56666655442 269999999
Q ss_pred cHHHHh
Q 009196 405 ARGALI 410 (540)
Q Consensus 405 GRgaL~ 410 (540)
||-++.
T Consensus 273 GRNIfQ 278 (307)
T 3fok_A 273 GRTLLY 278 (307)
T ss_dssp CTTTSS
T ss_pred chhhcc
Confidence 999887
No 398
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=91.91 E-value=1.1 Score=45.32 Aligned_cols=85 Identities=9% Similarity=-0.010 Sum_probs=56.7
Q ss_pred HHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 301 GIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 301 eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+.++.+++.. ..|+.|-+.. . +=+..+.++|+|.|-++.-+ .+.++++.+.+..++++.+
T Consensus 187 ~Av~~ar~~~~~~~IeVEv~t-----l----~ea~eAl~aGaD~I~LDn~~----------~~~l~~av~~~~~~v~iea 247 (287)
T 3tqv_A 187 KAVTKAKKLDSNKVVEVEVTN-----L----DELNQAIAAKADIVMLDNFS----------GEDIDIAVSIARGKVALEV 247 (287)
T ss_dssp HHHHHHHHHCTTSCEEEEESS-----H----HHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHhhCCCCcEEEEeCC-----H----HHHHHHHHcCCCEEEEcCCC----------HHHHHHHHHhhcCCceEEE
Confidence 3444444432 4566664432 2 22344556899999997522 2456666665544799999
Q ss_pred eCCCCCHHHHHHHHhcCCCcCeeeecHH
Q 009196 380 NGDIYSYLDWNKHKSDCPELASCMIARG 407 (540)
Q Consensus 380 NGdI~s~eDa~~~l~~~~gaDgVMIGRg 407 (540)
+||| +.+.+.++.+ +|+|.+.+|.-
T Consensus 248 SGGI-t~~~i~~~a~--tGVD~IsvGal 272 (287)
T 3tqv_A 248 SGNI-DRNSIVAIAK--TGVDFISVGAI 272 (287)
T ss_dssp ESSC-CTTTHHHHHT--TTCSEEECSHH
T ss_pred ECCC-CHHHHHHHHH--cCCCEEEEChh
Confidence 9999 8888888665 89999999843
No 399
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=91.91 E-value=0.71 Score=46.31 Aligned_cols=110 Identities=10% Similarity=0.069 Sum_probs=69.9
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCC-CcCHHHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSK-LADWDYIYQC 367 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g-~adw~~I~~i 367 (540)
||..+++.+++.++ . .+++||.+|.-+.- +..++...+..+...|..-+++.-|+..-.|.. ..|+..+..+
T Consensus 112 ga~~~~n~~ll~~~----a-~~~kPV~lk~G~~~--t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~l 184 (280)
T 2qkf_A 112 PAFLARQTDLVVAM----A-KTGNVVNIKKPQFL--SPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVM 184 (280)
T ss_dssp CGGGTTBHHHHHHH----H-HTCCEEEEECCTTS--CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHH
T ss_pred CcccccCHHHHHHH----H-cCCCcEEEECCCCC--CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHH
Confidence 77788888865554 2 46899999887632 345677778888999986665544443223321 1478889999
Q ss_pred HHHcCCCceEEEe-----------CCCCC------HHHHHHHHhcCCCcCeeeecHHH
Q 009196 368 ARKASDDLQVLGN-----------GDIYS------YLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 368 ~~~~~~~IPVIgN-----------GdI~s------~eDa~~~l~~~~gaDgVMIGRga 408 (540)
++..+ ++||+.. |+-.. ..-+..++. .||||+||=+-.
T Consensus 185 k~~~~-~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aava--~Ga~G~~IE~H~ 239 (280)
T 2qkf_A 185 KQTCG-NLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMA--TRLAGLFLESHP 239 (280)
T ss_dssp HHHTT-TCCEEEEHHHHCC----------CHHHHHHHHHHHHHT--TCCSEEEEEC--
T ss_pred HHhCC-CCCEEEECCCCccccCccccccCCchhhHHHHHHHHHH--cCCCEEEEeecC
Confidence 98864 5899984 22211 122334443 799999998654
No 400
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=91.90 E-value=0.48 Score=49.39 Aligned_cols=106 Identities=11% Similarity=0.096 Sum_probs=57.7
Q ss_pred CccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCcc--CCCc---CH
Q 009196 287 GAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRY--SKLA---DW 361 (540)
Q Consensus 287 G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y--~g~a---dw 361 (540)
|.++.++++|+. .-..-++..-+.|+..-+..+ .. ..+..+.++..|++++.+|-...+... .+.. +|
T Consensus 122 Gs~~~~le~~~~--~~~~v~r~~P~~~~ianig~~--~~---~e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~ 194 (365)
T 3sr7_A 122 GSYSTALKNPDD--TSYQVKKSRPHLLLATNIGLD--KP---YQAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSW 194 (365)
T ss_dssp -------------------------CCEEEEEETT--SC---HHHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHH
T ss_pred ccccccccCccc--cceEehhhCCCCcEEEEeCCC--CC---HHHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHH
Confidence 444455666664 111111222256666544332 22 235677778899999999976532111 1222 34
Q ss_pred -HHHHHHHHHcCCCceEEEeCCC---CCHHHHHHHHhcCCCcCeeee
Q 009196 362 -DYIYQCARKASDDLQVLGNGDI---YSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 362 -~~I~~i~~~~~~~IPVIgNGdI---~s~eDa~~~l~~~~gaDgVMI 404 (540)
+.|+.+++.+ ++||+.=| | .+++++..+.+ .|||+|.|
T Consensus 195 ~~~I~~l~~~~--~~PVivK~-vg~g~s~e~A~~l~~--aGad~I~V 236 (365)
T 3sr7_A 195 KKHLSDYAKKL--QLPFILKE-VGFGMDVKTIQTAID--LGVKTVDI 236 (365)
T ss_dssp HHHHHHHHHHC--CSCEEEEE-CSSCCCHHHHHHHHH--HTCCEEEC
T ss_pred HHHHHHHHHhh--CCCEEEEE-CCCCCCHHHHHHHHH--cCCCEEEE
Confidence 6889999988 69999875 6 79999988665 79999987
No 401
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=91.89 E-value=2.6 Score=42.47 Aligned_cols=119 Identities=13% Similarity=0.078 Sum_probs=75.9
Q ss_pred CCccccccCCchHHHHHHHHhcccccccEEEEec-CCCCC-C----h-----hHHHHHHHHHHHcCCcEEEEecccccCc
Q 009196 286 KGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR-TGYFE-G----K-----NRIDSLIADIGTWGASAVTVHGRTRQQR 354 (540)
Q Consensus 286 ~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR-~G~~e-~----~-----~~~~~la~~leeaGvdaItVHgRtr~q~ 354 (540)
||.--.+..|-+...++++.+... ++.|-.-+- +|-.+ . . .+..+..+.+++.|+|.|.+.-.|..+.
T Consensus 104 DgS~lp~eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~ 182 (286)
T 1gvf_A 104 DGSHFPFAENVKLVKSVVDFCHSQ-DCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGL 182 (286)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHT-TCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccC
Confidence 343334556667777777776543 444444332 22211 1 0 2344555666789999998877776667
Q ss_pred cCCC--cCHHHHHHHHHHcCCCceEEEeCCCCC-HHHHHHHHhcCCCcCeeeecHHHH
Q 009196 355 YSKL--ADWDYIYQCARKASDDLQVLGNGDIYS-YLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 355 y~g~--adw~~I~~i~~~~~~~IPVIgNGdI~s-~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
|.+. .+++.+++|++.+ ++|++.-|+=-. .+++.+++. .|+.=|=|++.+.
T Consensus 183 Y~~~p~Ld~~~L~~I~~~~--~vpLVlHGgSG~~~e~i~~ai~--~Gv~KiNi~Tdl~ 236 (286)
T 1gvf_A 183 YSKTPKIDFQRLAEIREVV--DVPLVLHGASDVPDEFVRRTIE--LGVTKVNVATELK 236 (286)
T ss_dssp CSSCCCCCHHHHHHHHHHC--CSCEEECCCTTCCHHHHHHHHH--TTEEEEEECHHHH
T ss_pred cCCCCccCHHHHHHHHHhc--CCCEEEECCCCCCHHHHHHHHH--CCCeEEEEChHHH
Confidence 7653 4789999999998 699998886554 455677776 6777777776553
No 402
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=91.89 E-value=1.8 Score=42.67 Aligned_cols=95 Identities=14% Similarity=0.207 Sum_probs=70.3
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecC
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRT 320 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~ 320 (540)
..+.|-|.|.+.+++.+.|+.+. ..|+|.||+-+-+ .. . ..+.+.+.+++..++..+ ++|+.+=+|.
T Consensus 20 PkIcvpl~~~t~~e~l~~a~~~~-~~~aD~vElR~D~----l~--~-----~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt 87 (258)
T 4h3d_A 20 PKICVPIIGKNKKDIIKEAKELK-DACLDIIEWRVDF----FE--N-----VENIKEVKEVLYELRSYIHDIPLLFTFRS 87 (258)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHT-TSSCSEEEEEGGG----CT--T-----TTCHHHHHHHHHHHHHHCTTSCEEEECCC
T ss_pred CEEEEEeCCCCHHHHHHHHHHHh-hcCCCEEEEeecc----cc--c-----cCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 35789999999999988888876 6799999996432 10 0 124677888888888876 7899999997
Q ss_pred CCC-----CChhHHHHHHHHHHHcC-CcEEEEec
Q 009196 321 GYF-----EGKNRIDSLIADIGTWG-ASAVTVHG 348 (540)
Q Consensus 321 G~~-----e~~~~~~~la~~leeaG-vdaItVHg 348 (540)
-++ .+.+....+.+.+.+.| +++|-|--
T Consensus 88 ~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 121 (258)
T 4h3d_A 88 VVEGGEKLISRDYYTTLNKEISNTGLVDLIDVEL 121 (258)
T ss_dssp GGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEG
T ss_pred hhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhh
Confidence 443 23456777777777776 89998853
No 403
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=91.62 E-value=3 Score=41.98 Aligned_cols=119 Identities=9% Similarity=-0.004 Sum_probs=77.4
Q ss_pred CCccccccCCchHHHHHHHHhcccccccEEEEec-CCCCCC--------hhHHHHHHHHHHHcCCcEEEEecccccCccC
Q 009196 286 KGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR-TGYFEG--------KNRIDSLIADIGTWGASAVTVHGRTRQQRYS 356 (540)
Q Consensus 286 ~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR-~G~~e~--------~~~~~~la~~leeaGvdaItVHgRtr~q~y~ 356 (540)
||.--.+..|-+...++++.+... ++.|-.-+- +|-.++ -.+..+..+.+++.|+|+|.+.-.|..+.|.
T Consensus 110 DgS~~p~eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 110 DASHHPFEENVETTKKVVEYAHAR-NVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTT-TCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHc-CCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC
Confidence 444334556677777888777643 544444332 222211 0234455556678999999887666666675
Q ss_pred CC--cCHHHHHHHHHHcCCCceEEEeCCCCCH-HHHHHHHhcCCCcCeeeecHHHH
Q 009196 357 KL--ADWDYIYQCARKASDDLQVLGNGDIYSY-LDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 357 g~--adw~~I~~i~~~~~~~IPVIgNGdI~s~-eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
+. .+++.+++|++.+ ++|++.-|+=-.+ +++.+++. .|+.=|=|++.+.
T Consensus 189 ~~p~Ld~~~L~~I~~~v--~vpLVlHGgSG~~~e~i~~ai~--~Gv~KiNi~Tdl~ 240 (288)
T 3q94_A 189 GEPNLGFAEMEQVRDFT--GVPLVLHGGTGIPTADIEKAIS--LGTSKINVNTENQ 240 (288)
T ss_dssp SSCCCCHHHHHHHHHHH--CSCEEECCCTTCCHHHHHHHHH--TTEEEEEECHHHH
T ss_pred CCCccCHHHHHHHHHhc--CCCEEEeCCCCCCHHHHHHHHH--cCCeEEEEChHHH
Confidence 43 4799999999999 6999988876655 45666665 6777777776653
No 404
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=91.61 E-value=0.78 Score=46.60 Aligned_cols=155 Identities=12% Similarity=0.121 Sum_probs=84.2
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIG 337 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~le 337 (540)
.|+++. ++|||.|=+-..+ ...+ ..|+-...+-..+.+...++.|...+ ++||++-+-.|+- +..++.+.++.+.
T Consensus 30 sA~l~e-~aGf~ai~vsG~~-~a~~-~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg-~~~~v~~tv~~l~ 105 (302)
T 3fa4_A 30 SARVAL-SAGFDALYMTGAG-TAAS-VHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYG-GPIMVARTTEQYS 105 (302)
T ss_dssp HHHHHH-TTTCSCEEECHHH-HHHH-HHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTS-SHHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEeCcHH-HHHH-HcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCC-CHHHHHHHHHHHH
Confidence 344454 7899988762100 0000 01221112223455666677777765 8999999999975 4667888899999
Q ss_pred HcCCcEEEEecccccCc--c-CC--CcCH-HHHHHHH---HHcC-CCceEEEeCCCCCH-----HHHHHHH---hcCCCc
Q 009196 338 TWGASAVTVHGRTRQQR--Y-SK--LADW-DYIYQCA---RKAS-DDLQVLGNGDIYSY-----LDWNKHK---SDCPEL 399 (540)
Q Consensus 338 eaGvdaItVHgRtr~q~--y-~g--~adw-~~I~~i~---~~~~-~~IPVIgNGdI~s~-----eDa~~~l---~~~~ga 399 (540)
++|+++|.|-+.+...+ . .+ .... +++.+|+ ++.. .+.+++.|...... +++.+.. .+ .||
T Consensus 106 ~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~e-AGA 184 (302)
T 3fa4_A 106 RSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARD-AGA 184 (302)
T ss_dssp HTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHT-TTC
T ss_pred HcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHH-cCC
Confidence 99999999976542211 1 11 1222 3344443 2210 02344444444333 3333221 23 799
Q ss_pred CeeeecHHHHhCCCchHHHHh
Q 009196 400 ASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 400 DgVMIGRgaL~nPwif~eik~ 420 (540)
|+|++= | +.++.-+.++.+
T Consensus 185 D~ifi~-g-~~~~~ei~~~~~ 203 (302)
T 3fa4_A 185 DVGFLE-G-ITSREMARQVIQ 203 (302)
T ss_dssp SEEEET-T-CCCHHHHHHHHH
T ss_pred CEEeec-C-CCCHHHHHHHHH
Confidence 999983 2 355554555543
No 405
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=91.57 E-value=3.1 Score=40.26 Aligned_cols=138 Identities=13% Similarity=0.115 Sum_probs=80.1
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc--ccc--c--EEE
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT--VDK--P--ITI 316 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~--v~i--P--VtV 316 (540)
++=+-++ ..|+....+++.+. ++|+|.|-+|.-. | .+.+..+++.+++. .+. | +.|
T Consensus 58 ~lD~kl~-Dip~t~~~~~~~~~-~~Gad~vtvH~~~----------g------~~~l~~~~~~~~~~~~~g~~~~~~~~V 119 (239)
T 1dbt_A 58 FLDLKLH-DIPTTVNKAMKRLA-SLGVDLVNVHAAG----------G------KKMMQAALEGLEEGTPAGKKRPSLIAV 119 (239)
T ss_dssp EEEEEEC-SCHHHHHHHHHHHH-TTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred EEEeccc-cchHHHHHHHHHHH-hcCCCEEEEeCcC----------C------HHHHHHHHHHHHhhhccCCCCccEEEE
Confidence 3445665 66888777777776 7899999999421 1 11233444444432 132 3 444
Q ss_pred EecCCCCC-----------C-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC
Q 009196 317 KVRTGYFE-----------G-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY 384 (540)
Q Consensus 317 KiR~G~~e-----------~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~ 384 (540)
-+.++... + .+.+..++....+.|.+.+.... +-++++++..+ +.+++..|||.
T Consensus 120 ~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~-------------~~i~~lr~~~~-~~~i~v~gGI~ 185 (239)
T 1dbt_A 120 TQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV-------------HEAKAIYQAVS-PSFLTVTPGIR 185 (239)
T ss_dssp CSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG-------------GGHHHHTTTSC-TTCEEEECCBC
T ss_pred EEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH-------------HHHHHHHHhcC-CCcEEEeCCcC
Confidence 44433310 1 11122222223567777754432 23566666664 46899999996
Q ss_pred CHHH----------HHHHHhcCCCcCeeeecHHHHhCCCc
Q 009196 385 SYLD----------WNKHKSDCPELASCMIARGALIKPWI 414 (540)
Q Consensus 385 s~eD----------a~~~l~~~~gaDgVMIGRgaL~nPwi 414 (540)
--.. ..++++ .|+|.+.+||+.+..|..
T Consensus 186 ~~~~~~~dq~rv~tp~~a~~--aGad~iVvGr~I~~a~dp 223 (239)
T 1dbt_A 186 MSEDAANDQVRVATPAIARE--KGSSAIVVGRSITKAEDP 223 (239)
T ss_dssp CTTSCCTTCSSCBCHHHHHH--TTCSEEEECHHHHTSSCH
T ss_pred CCCCCccceeccCCHHHHHH--cCCCEEEEChhhcCCCCH
Confidence 4322 145554 799999999999987663
No 406
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=91.48 E-value=0.33 Score=50.85 Aligned_cols=69 Identities=9% Similarity=0.016 Sum_probs=52.9
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
..+.+..+.++|+++|.++.-. ++ ....|+.++.+++.++ ++||++ |++.+.+++..+.+ .|+|+|.+|
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~---g~-~~~~~e~i~~ir~~~~-~~pviv-~~v~~~~~a~~a~~--~Gad~I~vg 222 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAH---GH-STRIIELIKKIKTKYP-NLDLIA-GNIVTKEAALDLIS--VGADCLKVG 222 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC---CS-SHHHHHHHHHHHHHCT-TCEEEE-EEECSHHHHHHHHT--TTCSEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEeCCC---CC-hHHHHHHHHHHHHHCC-CCeEEE-cCCCcHHHHHHHHh--cCCCEEEEC
Confidence 4566778889999999985321 22 1234788999999886 699997 67889999988665 799999994
No 407
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=91.39 E-value=1 Score=42.25 Aligned_cols=92 Identities=10% Similarity=0.007 Sum_probs=65.0
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCce-EEEeCCCCCHHHH
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQ-VLGNGDIYSYLDW 389 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IP-VIgNGdI~s~eDa 389 (540)
..|+..=+|. .+..+..+.++.+.+.|+++|.+...+ +...+.++++++.+ ++| +|+.|.+.+.+++
T Consensus 6 ~~~i~~~i~~---~d~~~~~~~~~~~~~~G~~~i~l~~~~-------~~~~~~i~~i~~~~--~~~l~vg~g~~~~~~~i 73 (212)
T 2v82_A 6 KLPLIAILRG---ITPDEALAHVGAVIDAGFDAVEIPLNS-------PQWEQSIPAIVDAY--GDKALIGAGTVLKPEQV 73 (212)
T ss_dssp SSCEEEECTT---CCHHHHHHHHHHHHHHTCCEEEEETTS-------TTHHHHHHHHHHHH--TTTSEEEEECCCSHHHH
T ss_pred CCCEEEEEeC---CCHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHhC--CCCeEEEeccccCHHHH
Confidence 4567766664 355778899999999999999885332 23356778887776 354 4577889999998
Q ss_pred HHHHhcCCCcCeeeecHHHHhCCCchHHHH
Q 009196 390 NKHKSDCPELASCMIARGALIKPWIFTEIK 419 (540)
Q Consensus 390 ~~~l~~~~gaDgVMIGRgaL~nPwif~eik 419 (540)
..+++ .|||+|.++. .++.+.+.++
T Consensus 74 ~~a~~--~Gad~V~~~~---~~~~~~~~~~ 98 (212)
T 2v82_A 74 DALAR--MGCQLIVTPN---IHSEVIRRAV 98 (212)
T ss_dssp HHHHH--TTCCEEECSS---CCHHHHHHHH
T ss_pred HHHHH--cCCCEEEeCC---CCHHHHHHHH
Confidence 88776 7999998764 2344444443
No 408
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=91.34 E-value=0.61 Score=46.63 Aligned_cols=140 Identities=13% Similarity=0.058 Sum_probs=83.7
Q ss_pred HHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC-----------------cC
Q 009196 298 RMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL-----------------AD 360 (540)
Q Consensus 298 ~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~-----------------ad 360 (540)
++.+.++.+++.-...+..=+-.|+ .+.+.+.++++.|.++|+|.|-+--=.......|| .-
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGd-P~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~ 84 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGD-PNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDIC 84 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTS-SCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHH
Confidence 4556666665443445555566775 45678999999999999999988421111111111 12
Q ss_pred HHHHHHHHHHcCCCceEEEeCCCC-----CHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCC-------CCCCH
Q 009196 361 WDYIYQCARKASDDLQVLGNGDIY-----SYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRH-------WDITS 428 (540)
Q Consensus 361 w~~I~~i~~~~~~~IPVIgNGdI~-----s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~-------~~~s~ 428 (540)
++.++++++... ++||+.-|-.+ ..+...+...+ .|+|||.|.---+....-|.+.-.... -+.|+
T Consensus 85 ~~~v~~~r~~~~-~~Pivlm~Y~n~v~~~g~~~f~~~~~~-aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~ 162 (271)
T 3nav_A 85 FELIAQIRARNP-ETPIGLLMYANLVYARGIDDFYQRCQK-AGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTAS 162 (271)
T ss_dssp HHHHHHHHHHCT-TSCEEEEECHHHHHHTCHHHHHHHHHH-HTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHhcCC-CCCEEEEecCcHHHHHhHHHHHHHHHH-CCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 577888887722 79999887543 33545554555 899999996444443333333222111 12355
Q ss_pred HHHHHHHHHHHH
Q 009196 429 GERLNIMKDFAR 440 (540)
Q Consensus 429 ~erl~il~~~~~ 440 (540)
.||+..+-++..
T Consensus 163 ~eri~~i~~~~~ 174 (271)
T 3nav_A 163 DETLRAVAQLGK 174 (271)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHHCC
Confidence 688877766653
No 409
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=91.22 E-value=0.45 Score=48.05 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=61.2
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+.|-|.+..+-... ....++.+.+.+.+++||| |.|.. +.+++.++ .++ .||
T Consensus 35 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~-st~~ai~la~~A~~-~Ga 112 (304)
T 3cpr_A 35 DIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTN-NTRTSVELAEAAAS-AGA 112 (304)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCS-CHHHHHHHHHHHHH-TTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCC-CHHHHHHHHHHHHh-cCC
Confidence 34567788999999999999999988765543222 2355666677666579997 55555 44444432 234 799
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+-.+.+..|.
T Consensus 113 davlv~~P~y~~~~ 126 (304)
T 3cpr_A 113 DGLLVVTPYYSKPS 126 (304)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999998887774
No 410
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=91.13 E-value=1 Score=45.72 Aligned_cols=86 Identities=14% Similarity=0.162 Sum_probs=55.9
Q ss_pred HHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 301 GIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 301 eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+.++++++.. ..|+.|-+.. .+ + ++.+.++|+|.|-+..- +.+.++++.+.+..++++.+
T Consensus 198 ~Av~~~r~~~p~~~ieVEvdt-----ld---e-~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~iea 258 (298)
T 3gnn_A 198 EALDAAFALNAEVPVQIEVET-----LD---Q-LRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEV 258 (298)
T ss_dssp HHHHHHHHHC--CCCEEEESS-----HH---H-HHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEeCC-----HH---H-HHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEE
Confidence 4445555443 3455554432 22 2 34455689999999752 23455655554444799999
Q ss_pred eCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 380 NGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 380 NGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
+||| +.+.+.++.. +|+|++.+|.--
T Consensus 259 SGGI-~~~~i~~~a~--tGVD~isvG~lt 284 (298)
T 3gnn_A 259 SGGV-NFDTVRAIAE--TGVDRISIGALT 284 (298)
T ss_dssp ESSC-STTTHHHHHH--TTCSEEECGGGG
T ss_pred EcCC-CHHHHHHHHH--cCCCEEEECCee
Confidence 9999 7888888665 899999999743
No 411
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=91.12 E-value=1.7 Score=46.45 Aligned_cols=125 Identities=10% Similarity=0.079 Sum_probs=87.0
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~ 330 (540)
+++..++.++....+.||+.|-|..|.. +++.-.+.|+++++++ +.++.|-.-.+| +..+++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~w--t~~~Ai 264 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAW--SLDEAV 264 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCB--CHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCcc--CHHHHH
Confidence 4566665555544356999999875532 3344456778888877 667777777777 467889
Q ss_pred HHHHHHHHcCCcEEEEecccccCccCC---CcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 331 SLIADIGTWGASAVTVHGRTRQQRYSK---LADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 331 ~la~~leeaGvdaItVHgRtr~q~y~g---~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
++++.|+.. +.++ +|.... ....+..+++++.+ ++||.+.=.+.++.++.++++. ..+|.++.
T Consensus 265 ~~~~~le~~-l~wi-------EeP~~~~d~~~~~e~~a~lr~~~--~iPIa~gE~~~~~~~~~~~i~~-~avdi~~~ 330 (464)
T 4g8t_A 265 KIGKQLKGV-LAYA-------EDPCGAEQGYSGREIMAEFRRAT--GLPTATNMIATDWRQMGHTISL-QSVDIPLA 330 (464)
T ss_dssp HHHHHTTTT-CSCE-------ESCBCCBTTBCHHHHHHHHHHHH--CCCEEESSSSCSHHHHHHHHHH-TCCSEEBC
T ss_pred HHHHHhhhc-ccee-------ecCcCcccccchHHHHHhhhccC--CCCccccccccchhhHHHHHHh-hCCCEEec
Confidence 999998765 5543 333221 12246678899988 7999999999999999999886 66775543
No 412
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=91.11 E-value=0.51 Score=44.81 Aligned_cols=68 Identities=15% Similarity=0.071 Sum_probs=49.6
Q ss_pred HHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHH
Q 009196 329 IDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGA 408 (540)
Q Consensus 329 ~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRga 408 (540)
...-++.+.....|++-+-+ ++.--+.++++ + ++|||+.|.|.|.||+.+ +. .||++|..+.--
T Consensus 117 l~~~~~~I~~~kPD~iEiLP--------g~v~p~~I~~v---~--~~PiIaGGlI~t~edv~~-l~--aGA~aIsTs~~~ 180 (188)
T 1vkf_A 117 VERGIEQIETLGVDVVEVLP--------GAVAPKVARKI---P--GRTVIAAGLVETEEEARE-IL--KHVSAISTSSRI 180 (188)
T ss_dssp HHHHHHHHHHHTCSEEEEES--------GGGHHHHHTTS---T--TSEEEEESCCCSHHHHHH-HT--TTSSEEEECCHH
T ss_pred HhhhhhhccccCCCeEeecC--------CCchHHHHHHh---c--CCCEEEECCcCCHHHHHH-HH--CCCeEEEeCCHH
Confidence 34455556666777766541 22123555555 4 799999999999999999 86 799999999988
Q ss_pred HhCC
Q 009196 409 LIKP 412 (540)
Q Consensus 409 L~nP 412 (540)
|++.
T Consensus 181 LW~~ 184 (188)
T 1vkf_A 181 LWKM 184 (188)
T ss_dssp HHTC
T ss_pred HhCC
Confidence 8764
No 413
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=91.11 E-value=2.2 Score=43.38 Aligned_cols=136 Identities=7% Similarity=0.005 Sum_probs=81.7
Q ss_pred CCeEEEEecCC-cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEec
Q 009196 241 EDLFGVQICGA-YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR 319 (540)
Q Consensus 241 e~p~~vQL~G~-~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR 319 (540)
..|+.+.|=+. +.+...+|. ++||+-|-| ||.--.+..|-+...++++.+... ++.|-.-+-
T Consensus 74 ~VPValHLDHg~~~e~~~~ai-----~~GFtSVMi-----------DgS~~p~eeNi~~Tk~vv~~ah~~-gvsVEaELG 136 (307)
T 3n9r_A 74 HIPVALHLDHGTTFESCEKAV-----KAGFTSVMI-----------DASHHAFEENLELTSKVVKMAHNA-GVSVEAELG 136 (307)
T ss_dssp TSCEEEEEEEECSHHHHHHHH-----HHTCSEEEE-----------CCTTSCHHHHHHHHHHHHHHHHHT-TCEEEEEES
T ss_pred CCcEEEECCCCCCHHHHHHHH-----HhCCCcEEE-----------ECCCCCHHHHHHHHHHHHHHHHHc-CCeEEEEee
Confidence 45566555432 333333322 236665555 333334455667777777776543 444443332
Q ss_pred -CCCCCCh----------hHHHHHHHHHHHcCCcEEEEecccccCccC----CCcCHHHHHHHHHHcCCCceEEEeCCCC
Q 009196 320 -TGYFEGK----------NRIDSLIADIGTWGASAVTVHGRTRQQRYS----KLADWDYIYQCARKASDDLQVLGNGDIY 384 (540)
Q Consensus 320 -~G~~e~~----------~~~~~la~~leeaGvdaItVHgRtr~q~y~----g~adw~~I~~i~~~~~~~IPVIgNGdI~ 384 (540)
+|-.++. .+..+..+.+++.|+|+|.+.-.|..+.|. +..+++.+++|++.. ++|++.-|+=.
T Consensus 137 ~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~--~~PLVlHGgS~ 214 (307)
T 3n9r_A 137 RLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLT--NIPLVLHGASA 214 (307)
T ss_dssp CCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHH--CSCEEESSCCC
T ss_pred eeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcC--CCCeEEeCCCC
Confidence 2211110 133444555667899999887777666775 235899999997766 69999999887
Q ss_pred CHHHHHHHHhc
Q 009196 385 SYLDWNKHKSD 395 (540)
Q Consensus 385 s~eDa~~~l~~ 395 (540)
-++++.+.+.+
T Consensus 215 vp~~~~~~~~~ 225 (307)
T 3n9r_A 215 IPDNVRKSYLD 225 (307)
T ss_dssp CCHHHHHHHHH
T ss_pred cchHHHHHHHH
Confidence 78888877776
No 414
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=91.10 E-value=1.6 Score=44.84 Aligned_cols=98 Identities=14% Similarity=0.047 Sum_probs=69.5
Q ss_pred CCchHHHHHHHHhcccccccEEEEecCCCCCC-------------------------------hhHHHHHHHHHHHcCCc
Q 009196 294 TKPMRMKGIIEATSGTVDKPITIKVRTGYFEG-------------------------------KNRIDSLIADIGTWGAS 342 (540)
Q Consensus 294 ~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~-------------------------------~~~~~~la~~leeaGvd 342 (540)
..++.+.+.++.+++.++.|+.|-+-...... .....+.++.+.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 35778888888888777778777653321110 01135667888899999
Q ss_pred EEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee-cH
Q 009196 343 AVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI-AR 406 (540)
Q Consensus 343 aItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI-GR 406 (540)
.|++|... ..++++..+++. +++|+. .+.+.+++..+.+ .|+|+|.+ |+
T Consensus 125 ~V~~~~g~--------~~~~~i~~~~~~---g~~v~~--~v~t~~~a~~a~~--~GaD~i~v~g~ 174 (369)
T 3bw2_A 125 VVSFHFGV--------PDREVIARLRRA---GTLTLV--TATTPEEARAVEA--AGADAVIAQGV 174 (369)
T ss_dssp EEEEESSC--------CCHHHHHHHHHT---TCEEEE--EESSHHHHHHHHH--TTCSEEEEECT
T ss_pred EEEEeCCC--------CcHHHHHHHHHC---CCeEEE--ECCCHHHHHHHHH--cCCCEEEEeCC
Confidence 99999632 246788888873 578876 5889999887665 79999998 65
No 415
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=91.03 E-value=1.4 Score=42.23 Aligned_cols=136 Identities=14% Similarity=0.100 Sum_probs=81.8
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccc---cccCCchHHHHHHHHhcccccccEEEEe
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGS---CLLTKPMRMKGIIEATSGTVDKPITIKV 318 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~Gs---aLl~~p~~l~eIv~av~~~v~iPVtVKi 318 (540)
-++++|.+.-....+.++.+.+. ++|||+|||...-|... ++++ .....+..+.++.+.+.+ .++.++.=.
T Consensus 10 mklg~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~ 83 (262)
T 3p6l_A 10 WRLGMQSYSFHLFPLTEALDKTQ-ELGLKYIEIYPGHKLGG----KWGDKVFDFNLDAQTQKEIKELAAS-KGIKIVGTG 83 (262)
T ss_dssp EEEEEEGGGGTTSCHHHHHHHHH-HTTCCEEEECTTEECCG----GGTTCEESTTCCHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred cEEEEEecccCCCCHHHHHHHHH-HcCCCEEeecCCccccc----ccccccccccCCHHHHHHHHHHHHH-cCCeEEEEe
Confidence 46788888755456777777777 78999999986544221 1111 011234455555555443 355443311
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEe---C-CC-CCHHHHHHHH
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN---G-DI-YSYLDWNKHK 393 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN---G-dI-~s~eDa~~~l 393 (540)
.............++.+...|+..|++|.. ...|..+.++++.. .+.|..- + -+ .+++++.+++
T Consensus 84 -~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~--------~~~~~~l~~~a~~~--gv~l~~En~~~~~~~~~~~~~~~ll 152 (262)
T 3p6l_A 84 -VYVAEKSSDWEKMFKFAKAMDLEFITCEPA--------LSDWDLVEKLSKQY--NIKISVHNHPQPSDYWKPENLLKAI 152 (262)
T ss_dssp -EECCSSTTHHHHHHHHHHHTTCSEEEECCC--------GGGHHHHHHHHHHH--TCEEEEECCSSSSSSSSHHHHHHHH
T ss_pred -ccCCccHHHHHHHHHHHHHcCCCEEEecCC--------HHHHHHHHHHHHHh--CCEEEEEeCCCccccCCHHHHHHHH
Confidence 111223456777888888999999999852 34688888887765 3444321 1 12 3778888877
Q ss_pred h
Q 009196 394 S 394 (540)
Q Consensus 394 ~ 394 (540)
.
T Consensus 153 ~ 153 (262)
T 3p6l_A 153 S 153 (262)
T ss_dssp T
T ss_pred H
Confidence 5
No 416
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.00 E-value=3.1 Score=40.44 Aligned_cols=131 Identities=10% Similarity=0.136 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCC-hhHHHH
Q 009196 253 PDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEG-KNRIDS 331 (540)
Q Consensus 253 p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~-~~~~~~ 331 (540)
.+.|.+-++.+. ++|+|+|=+ ||=. .+|. =|.+.+.+++++.. +.|+|+ -|. ++.- ..+..+
T Consensus 75 ~~~M~~Di~~~~-~~GadGvV~--G~Lt----~dg~-----iD~~~~~~Li~~a~---~~~vTF-HRA-FD~~~~~d~~~ 137 (224)
T 2bdq_A 75 LRIMEEDILRAV-ELESDALVL--GILT----SNNH-----IDTEAIEQLLPATQ---GLPLVF-HMA-FDVIPKSDQKK 137 (224)
T ss_dssp HHHHHHHHHHHH-HTTCSEEEE--CCBC----TTSS-----BCHHHHHHHHHHHT---TCCEEE-CGG-GGGSCTTTHHH
T ss_pred HHHHHHHHHHHH-HcCCCEEEE--eeEC----CCCC-----cCHHHHHHHHHHhC---CCeEEE-ECc-hhccCCcCHHH
Confidence 456667777776 789999988 4422 1221 36778888887664 578887 332 3211 134456
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
-.+.|.+.|++.|--||.... ..-....+.++++.+....+|-|+..||| +.+.+.++++. +|++.+=.
T Consensus 138 ale~L~~lGv~rILTSG~~~~--~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV-~~~Ni~~l~~~-tGv~e~H~ 206 (224)
T 2bdq_A 138 SIDQLVALGFTRILLHGSSNG--EPIIENIKHIKALVEYANNRIEIMVGGGV-TAENYQYICQE-TGVKQAHG 206 (224)
T ss_dssp HHHHHHHTTCCEEEECSCSSC--CCGGGGHHHHHHHHHHHTTSSEEEECSSC-CTTTHHHHHHH-HTCCEEEE
T ss_pred HHHHHHHcCCCEEECCCCCCC--CcHHHHHHHHHHHHHhhCCCeEEEeCCCC-CHHHHHHHHHh-hCCCEEcc
Confidence 678888999999987764321 11223467778777665547888888999 56777777765 78887764
No 417
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=90.96 E-value=0.92 Score=47.04 Aligned_cols=43 Identities=12% Similarity=0.139 Sum_probs=36.5
Q ss_pred CCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 357 KLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 357 g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+...|+.|+.+++.+ ++||+.-| |.+.+++..+.+ .|+|+|.+
T Consensus 202 ~~~~w~~i~~lr~~~--~~PvivK~-v~~~e~A~~a~~--~GaD~I~v 244 (352)
T 3sgz_A 202 ASFCWNDLSLLQSIT--RLPIILKG-ILTKEDAELAMK--HNVQGIVV 244 (352)
T ss_dssp TTCCHHHHHHHHHHC--CSCEEEEE-ECSHHHHHHHHH--TTCSEEEE
T ss_pred CCCCHHHHHHHHHhc--CCCEEEEe-cCcHHHHHHHHH--cCCCEEEE
Confidence 456899999999998 69998765 689999988776 79999987
No 418
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=90.95 E-value=0.72 Score=45.95 Aligned_cols=139 Identities=12% Similarity=0.037 Sum_probs=84.2
Q ss_pred HHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC-----------------cC
Q 009196 298 RMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL-----------------AD 360 (540)
Q Consensus 298 ~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~-----------------ad 360 (540)
++.+..+.+++.-...+..=+-.|+ .+.+.+.++++.|+++|+|.|.+--=.......|+ .-
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGd-P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~ 82 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGD-PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDC 82 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTS-SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHH
Confidence 4555666655443445555556675 35678899999999999999998511111111111 12
Q ss_pred HHHHHHHHHH-cCCCceEEEeCCCCC-----HHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHhcCC------C-CCC
Q 009196 361 WDYIYQCARK-ASDDLQVLGNGDIYS-----YLDWNKHKSDCPELASCMIARGALIKPWIFTEIKEQRH------W-DIT 427 (540)
Q Consensus 361 w~~I~~i~~~-~~~~IPVIgNGdI~s-----~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~~~------~-~~s 427 (540)
++.++++++. . ++||+.-|-.+. .+...+...+ .|+|+|.|.--.+....-+.+.-+... . +-|
T Consensus 83 ~~~v~~ir~~~~--~~Pivlm~Y~npv~~~g~e~f~~~~~~-aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t 159 (267)
T 3vnd_A 83 FDIITKVRAQHP--DMPIGLLLYANLVFANGIDEFYTKAQA-AGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNA 159 (267)
T ss_dssp HHHHHHHHHHCT--TCCEEEEECHHHHHHHCHHHHHHHHHH-HTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTC
T ss_pred HHHHHHHHhcCC--CCCEEEEecCcHHHHhhHHHHHHHHHH-cCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCC
Confidence 6778888887 5 799998865432 2555555555 899999997555544433333222111 1 235
Q ss_pred HHHHHHHHHHHHH
Q 009196 428 SGERLNIMKDFAR 440 (540)
Q Consensus 428 ~~erl~il~~~~~ 440 (540)
+.||+..+.+...
T Consensus 160 ~~eri~~i~~~~~ 172 (267)
T 3vnd_A 160 DADTLKMVSEQGE 172 (267)
T ss_dssp CHHHHHHHHHHCC
T ss_pred CHHHHHHHHHhCC
Confidence 5688887776654
No 419
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=90.92 E-value=5.5 Score=38.87 Aligned_cols=144 Identities=15% Similarity=0.088 Sum_probs=81.0
Q ss_pred CCeEEEEec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc--cccc----
Q 009196 241 EDLFGVQIC-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT--VDKP---- 313 (540)
Q Consensus 241 e~p~~vQL~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~--v~iP---- 313 (540)
+.++++=+- +--|.....+++.+. ++|+|.|.+|. +|+ ++-+...+++..+. .+.|
T Consensus 59 g~~iflDlK~~DI~nTv~~~~~~~~-~~gad~vTvh~-----------~~G-----~~~~~~a~~~~~~~~~~~~~~l~~ 121 (239)
T 3tr2_A 59 GYRIFLDLKFYDIPQTVAGACRAVA-ELGVWMMNIHI-----------SGG-----RTMMETVVNALQSITLKEKPLLIG 121 (239)
T ss_dssp TCCEEEEEEECSCHHHHHHHHHHHH-HTTCSEEEEEG-----------GGC-----HHHHHHHHHHHHTCCCSSCCEEEE
T ss_pred CCCEEEEecccccchHHHHHHHHHH-hCCCCEEEEec-----------cCC-----HHHHHHHHHHHHhcCcCCCceEEE
Confidence 445554443 334666777777776 78999999984 222 23333444444322 1123
Q ss_pred EEEEecC--------CCCCC-hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC
Q 009196 314 ITIKVRT--------GYFEG-KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY 384 (540)
Q Consensus 314 VtVKiR~--------G~~e~-~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~ 384 (540)
||+=+.+ |+... .+.+..+++...++|++.+.+++. .+..+++.++. -.++...||.
T Consensus 122 Vt~LTS~~~~~l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~~-------------e~~~ir~~~~~-~fl~vtPGIr 187 (239)
T 3tr2_A 122 VTILTSLDGSDLKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSAQ-------------EAALLRKQFDR-NFLLVTPGIR 187 (239)
T ss_dssp ECSCTTCCHHHHHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCHH-------------HHHHHHTTCCT-TSEEEECCBC
T ss_pred EEEEeeCCHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECch-------------hHHHHHHhcCC-CcEEECCCcC
Confidence 2222222 11111 245667888888999999987532 13456666642 3356667775
Q ss_pred CHHH----------HHHHHhcCCCcCeeeecHHHHhCCCchHH
Q 009196 385 SYLD----------WNKHKSDCPELASCMIARGALIKPWIFTE 417 (540)
Q Consensus 385 s~eD----------a~~~l~~~~gaDgVMIGRgaL~nPwif~e 417 (540)
-..+ ..+++. .|+|.+.+||+.+..+.....
T Consensus 188 ~~g~~~~dQ~rv~t~~~~~~--aGad~lVvGr~I~~a~dp~~a 228 (239)
T 3tr2_A 188 LETDEKGDQKRVMTPRAAIQ--AGSDYLVIGRPITQSTDPLKA 228 (239)
T ss_dssp ----------CCBCHHHHHH--HTCSEEEECHHHHTSSSHHHH
T ss_pred CCCCCcCcccccCCHHHHHH--cCCCEEEEChHHhCCCCHHHH
Confidence 2211 334454 699999999999986654443
No 420
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=90.86 E-value=0.43 Score=48.18 Aligned_cols=86 Identities=14% Similarity=0.128 Sum_probs=60.2
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCcC
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~gaD 400 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ....++.+.+.+.+++||| |.|...+ +++.++ .++ .|||
T Consensus 32 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t-~~ai~la~~A~~-~Gad 109 (301)
T 1xky_A 32 FAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNT-HASIDLTKKATE-VGVD 109 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCH-HHHHHHHHHHHH-TTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCH-HHHHHHHHHHHh-cCCC
Confidence 4567788999999999999999888765442222 2355666666665579987 5555544 444432 234 7999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+-...+..|.
T Consensus 110 avlv~~P~y~~~s 122 (301)
T 1xky_A 110 AVMLVAPYYNKPS 122 (301)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999998887773
No 421
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=90.86 E-value=0.44 Score=47.75 Aligned_cols=87 Identities=14% Similarity=0.055 Sum_probs=60.8
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++||| |.|.. +.+++.++ .++ .||
T Consensus 20 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~-~t~~ai~la~~a~~-~Ga 97 (291)
T 3a5f_A 20 DFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSN-NTAASIAMSKWAES-IGV 97 (291)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS-SHHHHHHHHHHHHH-TTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcc-cHHHHHHHHHHHHh-cCC
Confidence 34567788899999999999999988765443222 2355666677666579987 55555 44444432 234 799
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+....+..|.
T Consensus 98 davlv~~P~y~~~s 111 (291)
T 3a5f_A 98 DGLLVITPYYNKTT 111 (291)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999988887774
No 422
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=90.82 E-value=0.4 Score=50.62 Aligned_cols=67 Identities=7% Similarity=0.009 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
.+.++.+.++|++.|.+.... ++ ....++.++++++.+ ++|||+ |.|.+++++..+.+ .|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~---G~-~~~~~e~I~~ik~~~--~i~Vi~-g~V~t~e~A~~a~~--aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH---GH-SLNIIRTLKEIKSKM--NIDVIV-GNVVTEEATKELIE--NGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC---CS-BHHHHHHHHHHHTTC--CCEEEE-EEECSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCC---CC-cccHHHHHHHHHhcC--CCeEEE-eecCCHHHHHHHHH--cCCCEEEEe
Confidence 577889999999999873111 11 112257788888877 689986 68899999998765 799999996
No 423
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=90.75 E-value=2.1 Score=43.03 Aligned_cols=105 Identities=12% Similarity=0.170 Sum_probs=64.7
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCC--C-CChhHHHHH-HH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGY--F-EGKNRIDSL-IA 334 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~--~-e~~~~~~~l-a~ 334 (540)
.|+++. ++|||.| + .|--..++ ..|+-..+.-..+.+...+++|++.++.|+.| .-+++ . .+...+.+- ++
T Consensus 46 sA~l~e-~aG~d~i-l-vGdSl~~~-~lG~~dt~~vTldemi~h~~aV~r~~~~~~vv-aD~pfgsy~~s~~~a~~na~r 120 (281)
T 1oy0_A 46 TARIFD-EAGIPVL-L-VGDSAANV-VYGYDTTVPISIDELIPLVRGVVRGAPHALVV-ADLPFGSYEAGPTAALAAATR 120 (281)
T ss_dssp HHHHHH-TTTCCEE-E-ECTTHHHH-TTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEE-EECCTTSSTTCHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEE-E-ECHHHHHH-HcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEE-EECCCCcccCCHHHHHHHHHH
Confidence 344554 7899999 4 24333322 24555555556777778888888888766554 44443 2 244555554 45
Q ss_pred HHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 335 DIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 335 ~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
.++++|+++|.|-+.. .-.+.|+.+.+. .|||+|
T Consensus 121 l~~eaGa~aVklEdg~--------e~~~~I~al~~a---gIpV~g 154 (281)
T 1oy0_A 121 FLKDGGAHAVKLEGGE--------RVAEQIACLTAA---GIPVMA 154 (281)
T ss_dssp HHHTTCCSEEEEEBSG--------GGHHHHHHHHHH---TCCEEE
T ss_pred HHHHhCCeEEEECCcH--------HHHHHHHHHHHC---CCCEEe
Confidence 5566999999997641 223556666654 589884
No 424
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=90.75 E-value=0.41 Score=48.70 Aligned_cols=88 Identities=13% Similarity=0.114 Sum_probs=61.4
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHH---HhcCCCcC
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~---l~~~~gaD 400 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+++.+.+++|||+.=+-.+.+++.++ .++ .|||
T Consensus 42 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~-~Gad 120 (314)
T 3qze_A 42 DWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKS-GGAD 120 (314)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH-TTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH-cCCC
Confidence 34567888889999999999999988765442222 234566666766667998854444455555443 334 7999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+.-+.+.+|.
T Consensus 121 avlv~~P~y~~~s 133 (314)
T 3qze_A 121 ACLLVTPYYNKPT 133 (314)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999988888874
No 425
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=90.75 E-value=1.3 Score=46.36 Aligned_cols=107 Identities=15% Similarity=0.090 Sum_probs=70.6
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEE-Eeccccc-Cc-cCCCcCHHHHH
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVT-VHGRTRQ-QR-YSKLADWDYIY 365 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaIt-VHgRtr~-q~-y~g~adw~~I~ 365 (540)
||..+.+..++.. +. .+++||.+|.-+. .+..+....+..+.+.|..-|+ +|..++. .. .....|+..+.
T Consensus 232 gs~~~~n~~LL~~----~a-~~gkPVilk~G~~--~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~ 304 (385)
T 3nvt_A 232 GARNMQNFELLKA----AG-RVDKPILLKRGLS--ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVP 304 (385)
T ss_dssp CGGGTTCHHHHHH----HH-TSSSCEEEECCTT--CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHH
T ss_pred CcccccCHHHHHH----HH-ccCCcEEEecCCC--CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHH
Confidence 6777888765544 32 3689999987663 3567888888889999986555 4532332 11 12346899999
Q ss_pred HHHHHcCCCceEEEe----CCCCCH--HHHHHHHhcCCCcCeeeecH
Q 009196 366 QCARKASDDLQVLGN----GDIYSY--LDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 366 ~i~~~~~~~IPVIgN----GdI~s~--eDa~~~l~~~~gaDgVMIGR 406 (540)
.+++.+ ++||+.. +|-... .-+..++. .||||+||=+
T Consensus 305 ~lk~~~--~lpV~~D~th~~G~r~~v~~~a~AAvA--~GA~gl~iE~ 347 (385)
T 3nvt_A 305 ILKKET--HLPVMVDVTHSTGRKDLLLPCAKAALA--IEADGVMAEV 347 (385)
T ss_dssp HHHHHB--SSCEEEEHHHHHCCGGGHHHHHHHHHH--TTCSEEEEEB
T ss_pred HHHHhc--CCCEEEcCCCCCCccchHHHHHHHHHH--hCCCEEEEEe
Confidence 999988 7999664 222221 22444555 7999999974
No 426
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=90.67 E-value=1.4 Score=44.74 Aligned_cols=90 Identities=16% Similarity=0.085 Sum_probs=68.9
Q ss_pred CchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 295 KPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 295 ~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
.++.+.+.++.+++.++.|+.|.+-.. . ....+.++.+.+.|++.|.+|+.. + .+++..+++. .
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~-~---~~~~~~~~~~~~~g~d~V~l~~g~-------p--~~~~~~l~~~---g 124 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV-S---PWADDLVKVCIEEKVPVVTFGAGN-------P--TKYIRELKEN---G 124 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT-S---TTHHHHHHHHHHTTCSEEEEESSC-------C--HHHHHHHHHT---T
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc-C---CCHHHHHHHHHHCCCCEEEECCCC-------c--HHHHHHHHHc---C
Confidence 688888999999988788998876541 1 234677888889999999998742 1 3567777763 5
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
++|+. .|.+.+++..+.. .|+|+|.+
T Consensus 125 ~~v~~--~v~s~~~a~~a~~--~GaD~i~v 150 (326)
T 3bo9_A 125 TKVIP--VVASDSLARMVER--AGADAVIA 150 (326)
T ss_dssp CEEEE--EESSHHHHHHHHH--TTCSCEEE
T ss_pred CcEEE--EcCCHHHHHHHHH--cCCCEEEE
Confidence 88885 6889999988665 79999988
No 427
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=90.67 E-value=0.42 Score=47.95 Aligned_cols=86 Identities=17% Similarity=0.209 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHHH---hcCCCcC
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKHK---SDCPELA 400 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~l---~~~~gaD 400 (540)
.+....+++.+.+.|++.|.+.|-|.+..+-... ....++.+.+.+.+++||| |.|.. +.+++.++. ++ .|||
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~-~t~~ai~la~~a~~-~Gad 98 (292)
T 2ojp_A 21 RASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGAN-ATAEAISLTQRFND-SGIV 98 (292)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS-SHHHHHHHHHHTTT-SSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCc-cHHHHHHHHHHHHh-cCCC
Confidence 4567788999999999999999988765443222 2355666677666579987 55555 444444432 33 7999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+--..+..|.
T Consensus 99 avlv~~P~y~~~s 111 (292)
T 2ojp_A 99 GCLTVTPYYNRPS 111 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988887773
No 428
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=90.65 E-value=0.45 Score=47.86 Aligned_cols=87 Identities=10% Similarity=0.039 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHH---HhcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKH---KSDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~---l~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++|||+.=+-.+.+++.++ .++ .|||+
T Consensus 27 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~-~Gada 105 (297)
T 3flu_A 27 YEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEK-AGADY 105 (297)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH-cCCCE
Confidence 4567788899999999999999988765432222 234566666766667998854444455555442 334 79999
Q ss_pred eeecHHHHhCCC
Q 009196 402 CMIARGALIKPW 413 (540)
Q Consensus 402 VMIGRgaL~nPw 413 (540)
||+.-..+.+|.
T Consensus 106 vlv~~P~y~~~~ 117 (297)
T 3flu_A 106 TLSVVPYYNKPS 117 (297)
T ss_dssp EEEECCCSSCCC
T ss_pred EEECCCCCCCCC
Confidence 999988887774
No 429
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.62 E-value=3 Score=41.83 Aligned_cols=150 Identities=9% Similarity=0.035 Sum_probs=88.8
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCC-CCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC--CCC----
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGC-PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT--GYF---- 323 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GC-P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~--G~~---- 323 (540)
.+.+.+.+|+ ++|++.|.|=.++ +... +...+..+.+..+.+.++++.+++. ++.|.+-+.. |..
T Consensus 84 ~~~~~i~~a~-----~aG~~~v~i~~~~s~~~~--~~~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~ 155 (302)
T 2ftp_A 84 PNLKGFEAAL-----ESGVKEVAVFAAASEAFS--QRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGD 155 (302)
T ss_dssp CSHHHHHHHH-----HTTCCEEEEEEESCHHHH--HHHHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBC
T ss_pred CCHHHHHHHH-----hCCcCEEEEEEecCHHHH--HHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCC
Confidence 4555444433 4699998874333 2211 1122333444556667777766553 4445433332 211
Q ss_pred CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC--CCCC-HHHHHHHHhcCCCcC
Q 009196 324 EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG--DIYS-YLDWNKHKSDCPELA 400 (540)
Q Consensus 324 e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG--dI~s-~eDa~~~l~~~~gaD 400 (540)
-+.+.+.++++.+.++|++.|.|..-. +..++....+.++.+++.++ ++||..-| |.-- ...+..+++ .||+
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~--G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~An~laAv~--aGa~ 230 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTI--GVGTAGATRRLIEAVASEVP-RERLAGHFHDTYGQALANIYASLL--EGIA 230 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESS--SCCCHHHHHHHHHHHTTTSC-GGGEEEEEBCTTSCHHHHHHHHHH--TTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC--CCcCHHHHHHHHHHHHHhCC-CCeEEEEeCCCccHHHHHHHHHHH--hCCC
Confidence 245688999999999999999986322 22223334678888888875 58888776 5443 344556665 6898
Q ss_pred eeeecHHHHhC-CC
Q 009196 401 SCMIARGALIK-PW 413 (540)
Q Consensus 401 gVMIGRgaL~n-Pw 413 (540)
-|=..=+-|+. |+
T Consensus 231 ~vd~tv~GlG~cp~ 244 (302)
T 2ftp_A 231 VFDSSVAGLGGCPY 244 (302)
T ss_dssp EEEEBGGGCCBCGG
T ss_pred EEEecccccCCCCC
Confidence 88666555554 53
No 430
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.61 E-value=1 Score=44.79 Aligned_cols=99 Identities=10% Similarity=0.096 Sum_probs=66.1
Q ss_pred HHHHHHhcc-cccccEEEEecCCCCCChhHHHHHHHHHHH-cCCcEEEEeccccc-----CccCCCc--CHHHHHHHHHH
Q 009196 300 KGIIEATSG-TVDKPITIKVRTGYFEGKNRIDSLIADIGT-WGASAVTVHGRTRQ-----QRYSKLA--DWDYIYQCARK 370 (540)
Q Consensus 300 ~eIv~av~~-~v~iPVtVKiR~G~~e~~~~~~~la~~lee-aGvdaItVHgRtr~-----q~y~g~a--dw~~I~~i~~~ 370 (540)
.++++.+++ ..+.|+.+=+..+ +.+++.+.++.+.+ +|+|+|.||--... ..|.... -++.++.+++.
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~~~---~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~ 162 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVAGS---EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV 162 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEECCS---SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEcCC---CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh
Confidence 335555655 3378888866542 35678888888888 99999999853211 1121111 15778888888
Q ss_pred cCCCceEEE--eCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 371 ASDDLQVLG--NGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 371 ~~~~IPVIg--NGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+ ++||+. ..++.+..++.+.+.+ .|+|+|.+
T Consensus 163 ~--~~pv~vk~~~~~~~~~~~a~~l~~-~G~d~i~v 195 (311)
T 1ep3_A 163 S--KVPLYVKLSPNVTDIVPIAKAVEA-AGADGLTM 195 (311)
T ss_dssp C--SSCEEEEECSCSSCSHHHHHHHHH-TTCSEEEE
T ss_pred c--CCCEEEEECCChHHHHHHHHHHHH-cCCCEEEE
Confidence 7 588875 3467777776565666 89999988
No 431
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=90.53 E-value=0.45 Score=47.77 Aligned_cols=86 Identities=9% Similarity=0.042 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHH-cCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 326 KNRIDSLIADIGT-WGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 326 ~~~~~~la~~lee-aGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
.+....+++.+.+ .|++.|.+.|-|.+..+-... ..+.++.+.+.+.+++||| |.|.. +.+++.++ .++ .||
T Consensus 23 ~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~-~t~~ai~la~~a~~-~Ga 100 (293)
T 1f6k_A 23 EKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSV-NLKEAVELGKYATE-LGY 100 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCS-CHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCC-CHHHHHHHHHHHHh-cCC
Confidence 4567788898999 999999999988765443222 2355666677666679998 55555 44444432 233 699
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+....+.+|.
T Consensus 101 davlv~~P~y~~~~ 114 (293)
T 1f6k_A 101 DCLSAVTPFYYKFS 114 (293)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988887774
No 432
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=90.52 E-value=0.48 Score=47.58 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=60.9
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++||| |.|.. +.+++.++ .++ .||
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~-~t~~ai~la~~A~~-~Ga 96 (294)
T 2ehh_A 19 DYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGN-ATHEAVHLTAHAKE-VGA 96 (294)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCS-CHHHHHHHHHHHHH-TTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC-CHHHHHHHHHHHHh-cCC
Confidence 34567888999999999999999888765442222 2355666677666579997 55555 44444432 234 799
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--+.+..|.
T Consensus 97 davlv~~P~y~~~s 110 (294)
T 2ehh_A 97 DGALVVVPYYNKPT 110 (294)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988887773
No 433
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=90.51 E-value=2.4 Score=41.65 Aligned_cols=115 Identities=12% Similarity=0.172 Sum_probs=78.6
Q ss_pred cCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC---cCH
Q 009196 285 NKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL---ADW 361 (540)
Q Consensus 285 ~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~---adw 361 (540)
+...|=.+..+.+++..+++.++++ ++.||+-|-.. .+-++...+.|++.|-+|...-..-+... ..+
T Consensus 102 TTegGldv~~~~~~l~~~i~~L~~~-GIrVSLFIDpd--------~~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el 172 (243)
T 1m5w_A 102 TTEGGLDVAGQRDKMRDACKRLADA-GIQVSLFIDAD--------EEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQEL 172 (243)
T ss_dssp SCCSCCCSGGGHHHHHHHHHHHHHT-TCEEEEEECSC--------HHHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHH
T ss_pred CCCcchhHHhhHHHHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHhCcCEEEEechhhhcCCCchhHHHHH
Confidence 4456777888999999999999764 88998877542 24456678899999999965322222111 112
Q ss_pred HHHHH---HHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 362 DYIYQ---CARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 362 ~~I~~---i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
..+.. .+... .+-|=+.-|+ +++.+..+. ..+++.-|-||.+++.+-
T Consensus 173 ~~i~~aa~~A~~l--GL~VnAGHgL-~y~Nv~~ia-~ip~i~ElnIGHaiia~A 222 (243)
T 1m5w_A 173 ARIAKAATFAASL--GLKVNAGHGL-TYHNVKAIA-AIPEMHELNIGHAIIGRA 222 (243)
T ss_dssp HHHHHHHHHHHHT--TCEEEEESSC-CTTTHHHHH-TCTTEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCEEecCCCC-CHHHHHHHh-hCCCCeEEccCHHHHHHH
Confidence 22222 22334 5888888888 788887754 458999999999987653
No 434
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=90.40 E-value=0.44 Score=48.18 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=61.6
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH---hcCCCcC
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK---SDCPELA 400 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l---~~~~gaD 400 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++|||+.=+=.+.+++.++. ++ .|||
T Consensus 34 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~-~Gad 112 (304)
T 3l21_A 34 DTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAA-EGAH 112 (304)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHH-HTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHH-cCCC
Confidence 34677888999999999999999888765432222 2355666677666679998554444555555432 33 6999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+.-..+..|.
T Consensus 113 avlv~~P~y~~~s 125 (304)
T 3l21_A 113 GLLVVTPYYSKPP 125 (304)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988887773
No 435
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=90.38 E-value=0.42 Score=47.96 Aligned_cols=88 Identities=9% Similarity=-0.030 Sum_probs=61.6
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH---hcCCCcC
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK---SDCPELA 400 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l---~~~~gaD 400 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ....++.+.+.+.+++|||+.=+-.+.+++.++. ++ .|||
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~-~Gad 99 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKA-LGAD 99 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH-HTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHH-cCCC
Confidence 34567888999999999999999988765442222 2345666667666679999655545556655432 33 6999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+.-+.+..|.
T Consensus 100 avlv~~P~y~~~~ 112 (292)
T 3daq_A 100 AIMLITPYYNKTN 112 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988777774
No 436
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=90.34 E-value=3.3 Score=39.52 Aligned_cols=130 Identities=11% Similarity=0.048 Sum_probs=81.7
Q ss_pred CCeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCC-CCcccccCCccccccCCchHHHHHHHHhcccccccEEEEec
Q 009196 241 EDLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGC-PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVR 319 (540)
Q Consensus 241 e~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GC-P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR 319 (540)
.-++++|.+.-....+.++.+.+. ++|||+|||.... |. ...+..+.++.+.+.+ .++.++.=.
T Consensus 17 ~~klg~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~------------~~~~~~~~~~~~~l~~-~gl~i~~~~- 81 (257)
T 3lmz_A 17 PFHLGMAGYTFVNFDLDTTLKTLE-RLDIHYLCIKDFHLPL------------NSTDEQIRAFHDKCAA-HKVTGYAVG- 81 (257)
T ss_dssp SSEEEECGGGGTTSCHHHHHHHHH-HTTCCEEEECTTTSCT------------TCCHHHHHHHHHHHHH-TTCEEEEEE-
T ss_pred ceEEEEEEEeecCCCHHHHHHHHH-HhCCCEEEEecccCCC------------CCCHHHHHHHHHHHHH-cCCeEEEEe-
Confidence 356888887655456677777776 7899999998541 11 1134555555555443 354443211
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE-eC-----CCCCHHHHHHHH
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG-NG-----DIYSYLDWNKHK 393 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg-NG-----dI~s~eDa~~~l 393 (540)
.............++.+...|+..|++|.. ...|..+.++++.. .|.+.. |- -+.+.+++.+++
T Consensus 82 ~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~--------~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~~~~~~ll 151 (257)
T 3lmz_A 82 PIYMKSEEEIDRAFDYAKRVGVKLIVGVPN--------YELLPYVDKKVKEY--DFHYAIHLHGPDIKTYPDATDVWVHT 151 (257)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCSEEEEEEC--------GGGHHHHHHHHHHH--TCEEEEECCCTTCSSSCSHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCEEEecCC--------HHHHHHHHHHHHHc--CCEEEEecCCCcccccCCHHHHHHHH
Confidence 111134566777888888999999999853 24677787777766 455442 22 246888888887
Q ss_pred hc
Q 009196 394 SD 395 (540)
Q Consensus 394 ~~ 395 (540)
..
T Consensus 152 ~~ 153 (257)
T 3lmz_A 152 KD 153 (257)
T ss_dssp TT
T ss_pred Hh
Confidence 63
No 437
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=90.29 E-value=1.5 Score=43.24 Aligned_cols=84 Identities=6% Similarity=0.009 Sum_probs=53.1
Q ss_pred cCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-----------------CHHHHHHHHHHcCCCceEEEeC
Q 009196 319 RTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-----------------DWDYIYQCARKASDDLQVLGNG 381 (540)
Q Consensus 319 R~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-----------------dw~~I~~i~~~~~~~IPVIgNG 381 (540)
-.|. .+.+...++++.|.++|+|+|-|-.=.......|+. -++.++++++.+| ++||+..|
T Consensus 24 ~~g~-p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~~Pi~~m~ 101 (262)
T 2ekc_A 24 MVGY-PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP-DIPFLLMT 101 (262)
T ss_dssp ETTS-SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TSCEEEEC
T ss_pred cCCC-CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC-CCCEEEEe
Confidence 3564 355788999999999999999983211111111111 1356788888775 59999976
Q ss_pred CCCC-----HHHHHHHHhcCCCcCeeeec
Q 009196 382 DIYS-----YLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 382 dI~s-----~eDa~~~l~~~~gaDgVMIG 405 (540)
..+. .+...+...+ .|+|||.+.
T Consensus 102 y~n~v~~~g~~~f~~~~~~-aG~dgvii~ 129 (262)
T 2ekc_A 102 YYNPIFRIGLEKFCRLSRE-KGIDGFIVP 129 (262)
T ss_dssp CHHHHHHHCHHHHHHHHHH-TTCCEEECT
T ss_pred cCcHHHHhhHHHHHHHHHH-cCCCEEEEC
Confidence 5431 1333333444 899999985
No 438
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.29 E-value=0.45 Score=48.06 Aligned_cols=86 Identities=12% Similarity=0.044 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCcC
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~gaD 400 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ....++.+++.+.+++||| |.|...+ +++.++ .++ .|||
T Consensus 31 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t-~~ai~la~~A~~-~Gad 108 (303)
T 2wkj_A 31 KASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVST-AESQQLAASAKR-YGFD 108 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSH-HHHHHHHHHHHH-HTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCH-HHHHHHHHHHHh-CCCC
Confidence 4567788999999999999999888765443222 2355666677666579998 5565544 444432 234 6999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+--..+.+|.
T Consensus 109 avlv~~P~y~~~s 121 (303)
T 2wkj_A 109 AVSAVTPFYYPFS 121 (303)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEecCCCCCCCC
Confidence 9999988887773
No 439
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=90.11 E-value=1.3 Score=45.17 Aligned_cols=155 Identities=7% Similarity=0.030 Sum_probs=85.3
Q ss_pred HHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccccc--ccEEEEecCCCCCChhHHHHHHHHH
Q 009196 259 TVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVD--KPITIKVRTGYFEGKNRIDSLIADI 336 (540)
Q Consensus 259 AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~--iPVtVKiR~G~~e~~~~~~~la~~l 336 (540)
.|+++. ++|||.|=+-..+ ...+ ..|+-...+-..+.+...+++|...+. +||++-+-.|+- +..++.+.++.+
T Consensus 37 sA~l~e-~aGf~ai~vsG~~-~a~s-~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~~v~~l 112 (307)
T 3lye_A 37 SARTAM-ELGFKSLYMTGAG-TTAS-RLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVARTVEHY 112 (307)
T ss_dssp HHHHHH-HTTCSCEEECHHH-HHHH-HHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCEEEeccHH-HHHH-hcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHHHHHHH
Confidence 344454 6899998762100 0000 012222222345566677888877764 999999999975 466788899999
Q ss_pred HHcCCcEEEEecccccCc--cC-C--CcCH-HHHHHH---HHHcC-CCceEEEeCCCCCH-----HHHHHH---HhcCCC
Q 009196 337 GTWGASAVTVHGRTRQQR--YS-K--LADW-DYIYQC---ARKAS-DDLQVLGNGDIYSY-----LDWNKH---KSDCPE 398 (540)
Q Consensus 337 eeaGvdaItVHgRtr~q~--y~-g--~adw-~~I~~i---~~~~~-~~IPVIgNGdI~s~-----eDa~~~---l~~~~g 398 (540)
.++|+++|.|-+.....+ .. + .... +++.+| +++.. .+.+++.|+..... +++.+- ..+ .|
T Consensus 113 ~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~e-AG 191 (307)
T 3lye_A 113 IRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARD-EG 191 (307)
T ss_dssp HHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHH-TT
T ss_pred HHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHH-CC
Confidence 999999999976542211 11 1 1122 334444 32210 02345555555443 233221 123 89
Q ss_pred cCeeeecHHHHhCCCchHHHHh
Q 009196 399 LASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 399 aDgVMIGRgaL~nPwif~eik~ 420 (540)
||+|++= .+.++..+.++.+
T Consensus 192 AD~ifi~--~~~~~~~~~~i~~ 211 (307)
T 3lye_A 192 ADVGLLE--GFRSKEQAAAAVA 211 (307)
T ss_dssp CSEEEEC--CCSCHHHHHHHHH
T ss_pred CCEEEec--CCCCHHHHHHHHH
Confidence 9999984 2345555555543
No 440
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=90.06 E-value=0.45 Score=47.47 Aligned_cols=97 Identities=14% Similarity=0.055 Sum_probs=64.3
Q ss_pred ccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecc-c----ccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC
Q 009196 310 VDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGR-T----RQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY 384 (540)
Q Consensus 310 v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgR-t----r~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~ 384 (540)
+..|+.+-++. .++++.+.++|+++|.+-.. . ..++.......+.++++++.+ ++|++.++++.
T Consensus 20 ~~~~~i~~~~~---------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~--~~Pvi~~~~~~ 88 (297)
T 2zbt_A 20 FKGGVIMDVTT---------PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAV--SIPVMAKVRIG 88 (297)
T ss_dssp GTTEEEEEESS---------HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTC--SSCEEEEEETT
T ss_pred hhCCeeeeech---------HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhc--CCCeEEEeccC
Confidence 34566664443 58899999999999987210 0 011111234578899998887 79999998888
Q ss_pred CHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 385 SYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 385 s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+.+++..+++ .|||+| .+......|.+.+.+++
T Consensus 89 ~~~~~~~~~~--aGad~v-~~~~~~~~~~~~~~~~~ 121 (297)
T 2zbt_A 89 HFVEAMILEA--IGVDFI-DESEVLTPADEEHHIDK 121 (297)
T ss_dssp CHHHHHHHHH--TTCSEE-EEETTSCCSCSSCCCCG
T ss_pred CHHHHHHHHH--CCCCEE-eeeCCCChHHHHHHHHH
Confidence 8888877665 799999 44332333555565554
No 441
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=90.05 E-value=0.49 Score=47.41 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=61.0
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++||| |.|...+ +++.++ .++ .||
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t-~~ai~la~~a~~-~Ga 96 (289)
T 2yxg_A 19 DFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCT-EEAIELSVFAED-VGA 96 (289)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSH-HHHHHHHHHHHH-HTC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCH-HHHHHHHHHHHh-cCC
Confidence 34667889999999999999999888765543222 2355666666666579997 5565544 444432 234 699
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--+.+..|.
T Consensus 97 davlv~~P~y~~~s 110 (289)
T 2yxg_A 97 DAVLSITPYYNKPT 110 (289)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988887774
No 442
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=89.98 E-value=0.57 Score=48.36 Aligned_cols=68 Identities=4% Similarity=0.001 Sum_probs=50.6
Q ss_pred HHHHHHHHHc--CCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 330 DSLIADIGTW--GASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 330 ~~la~~leea--GvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
.+.+..+.+. |++.|.+|... ++ ...-|+.|+++++..+ ++||+. |+|.|++++..+.+ .|||+|.++
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~---g~-~~~~~~~i~~lr~~~~-~~~vi~-g~v~t~e~A~~a~~--aGaD~I~v~ 189 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVAN---GY-SEHFVEFVKDVRKRFP-QHTIMA-GNVVTGEMVEELIL--SGADIIKVG 189 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSC---TT-BHHHHHHHHHHHHHCT-TSEEEE-EEECSHHHHHHHHH--TTCSEEEEC
T ss_pred HHHHHHHHhccCCCCEEEEEecC---CC-cHHHHHHHHHHHHhcC-CCeEEE-EeCCCHHHHHHHHH--hCCCEEEEC
Confidence 3455556665 99999998522 11 1234789999999885 689884 67899999999776 799999886
No 443
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=89.78 E-value=0.4 Score=49.98 Aligned_cols=107 Identities=14% Similarity=0.119 Sum_probs=64.7
Q ss_pred CccccccCCchHHH--HHHHHhcccccccEEEEecC----C-CCCChhHHHHHHHHHHHcCCcEEEEecccccC--ccCC
Q 009196 287 GAGSCLLTKPMRMK--GIIEATSGTVDKPITIKVRT----G-YFEGKNRIDSLIADIGTWGASAVTVHGRTRQQ--RYSK 357 (540)
Q Consensus 287 G~GsaLl~~p~~l~--eIv~av~~~v~iPVtVKiR~----G-~~e~~~~~~~la~~leeaGvdaItVHgRtr~q--~y~g 357 (540)
|.+.+.+++|+... ++++.. +-+.|+..-+.. + |. .+ .+.+.++..+++++.||--..+. ...|
T Consensus 95 Gs~~~~l~~~~~~~s~~~vr~~--ap~~~~~anlg~~ql~~~~~--~~---~~~~av~~~~a~al~Ihln~~~~~~~p~g 167 (368)
T 3vkj_A 95 GSQRVAIEKAEARESFAIVRKV--APTIPIIANLGMPQLVKGYG--LK---EFQDAIQMIEADAIAVHLNPAQEVFQPEG 167 (368)
T ss_dssp CCCHHHHHCGGGSHHHHHHHHH--CSSSCEEEEEEGGGGGTTCC--HH---HHHHHHHHTTCSEEEEECCHHHHHHSSSC
T ss_pred ecchhccCCHHHHhhHHHHHHh--CcCcceecCcCeeecCCCCC--HH---HHHHHHHHhcCCCeEEEecchhhhhCCCC
Confidence 33444555676533 334432 236787776554 3 42 22 23344455578888888432110 0111
Q ss_pred Cc-----CHHHHHHHHHHcCCCceEEEe--CCCCCHHHHHHHHhcCCCcCeeee
Q 009196 358 LA-----DWDYIYQCARKASDDLQVLGN--GDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 358 ~a-----dw~~I~~i~~~~~~~IPVIgN--GdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.. .|+.|+.+++.+ ++||+.= |...+++++..+.+ .|||+|.|
T Consensus 168 ~~~~~~~~~~~i~~i~~~~--~vPVivK~vG~g~s~~~A~~l~~--aGad~I~V 217 (368)
T 3vkj_A 168 EPEYQIYALEKLRDISKEL--SVPIIVKESGNGISMETAKLLYS--YGIKNFDT 217 (368)
T ss_dssp CCBCBTHHHHHHHHHHTTC--SSCEEEECSSSCCCHHHHHHHHH--TTCCEEEC
T ss_pred CchhhHHHHHHHHHHHHHc--CCCEEEEeCCCCCCHHHHHHHHh--CCCCEEEE
Confidence 22 467888998888 6999985 55579999988665 89999988
No 444
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=89.73 E-value=1.5 Score=46.19 Aligned_cols=116 Identities=9% Similarity=-0.049 Sum_probs=83.8
Q ss_pred hCCCCEEEecCCC-CCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCc
Q 009196 266 QCTVDFIDINMGC-PIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGAS 342 (540)
Q Consensus 266 ~aG~D~IDIN~GC-P~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvd 342 (540)
+.||..+-|..|- |. .|. ..++.-.+.|+++|+++ ++++.|-.-.+| +..++.++++.|++.++.
T Consensus 172 ~~Gf~~~K~Kv~~g~~-------~g~---~~~~~di~~v~avRea~G~~~~L~vDaN~~w--~~~~A~~~~~~Le~~~l~ 239 (404)
T 3ekg_A 172 KMGFIGGKMPLHHGPS-------EGE---EGLKKNLEELATMRERVGPDFWLMFDCWMSL--DLNYATRLARGAREYGLK 239 (404)
T ss_dssp HTTCSEEEEECCCCGG-------GHH---HHHHHHHHHHHHHHHHHCSSSEEEEECTTCC--CHHHHHHHHHHHGGGTCC
T ss_pred HcCCCEEEEecCCCCc-------ccc---ccHHHHHHHHHHHHHHhCCCCeEEecCCCCC--CHHHHHHHHHHHhhcCCc
Confidence 4599999887541 11 011 12455667888888887 567888777788 457899999999999988
Q ss_pred EEEEecccccCccCCCcCHHHHHHHHHHcCCCce--EEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 343 AVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQ--VLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 343 aItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IP--VIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+| +|.. .+.|++..+++++.+ ++| |.+.=.+.+..++.++++. ..+|.|++
T Consensus 240 ~i-------EeP~-~~~d~~~~a~l~~~~--~~pi~Ia~gE~~~~~~~~~~li~~-~a~dii~~ 292 (404)
T 3ekg_A 240 WI-------EEAL-PPDDYWGYAELRRNA--PTGMMVTTGEHEATRWGFRMLLEM-GCCDIIQP 292 (404)
T ss_dssp EE-------ECCS-CTTCHHHHHHHHHHS--CTTCEEEECTTCCHHHHHHHHHHT-TCCSEECC
T ss_pred EE-------ecCC-CcccHHHHHHHHHhc--CCCeEEEecCccCCHHHHHHHHHc-CCCCeEec
Confidence 77 3433 345889999999988 455 4444458899999998875 67888875
No 445
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.72 E-value=0.47 Score=47.70 Aligned_cols=86 Identities=9% Similarity=-0.036 Sum_probs=60.1
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHH--HHhcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNK--HKSDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~--~l~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+.|-|.+..+-... ..+.++.+.+.+.+++||| |.|...+.+.+.. ..++ .|||+
T Consensus 23 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~-~Gada 101 (294)
T 3b4u_A 23 IDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALN-AGARN 101 (294)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHh-cCCCE
Confidence 4567788999999999999999988765443222 2355666667665579987 6666544443322 2234 79999
Q ss_pred eeecHHHHhC-C
Q 009196 402 CMIARGALIK-P 412 (540)
Q Consensus 402 VMIGRgaL~n-P 412 (540)
||+.-..+.. |
T Consensus 102 vlv~~P~y~~~~ 113 (294)
T 3b4u_A 102 ILLAPPSYFKNV 113 (294)
T ss_dssp EEECCCCSSCSC
T ss_pred EEEcCCcCCCCC
Confidence 9999888877 6
No 446
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=89.68 E-value=0.55 Score=47.31 Aligned_cols=88 Identities=14% Similarity=0.037 Sum_probs=62.2
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCC-CceEEEeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASD-DLQVLGNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~-~IPVIgNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+ ++|||+.=+=.+.+++.++ .++ .||
T Consensus 26 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~-~Ga 104 (301)
T 3m5v_A 26 DEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKE-HGA 104 (301)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHH-TTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHH-cCC
Confidence 34677888999999999999999887665432222 23566677777776 7999854444455555443 234 799
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--+.+.+|.
T Consensus 105 davlv~~P~y~~~s 118 (301)
T 3m5v_A 105 DGILSVAPYYNKPT 118 (301)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999998888884
No 447
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.68 E-value=1.8 Score=43.94 Aligned_cols=107 Identities=14% Similarity=0.027 Sum_probs=58.7
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHH---HHHhcccccccEEEEecCCCCCChhH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGI---IEATSGTVDKPITIKVRTGYFEGKNR 328 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eI---v~av~~~v~iPVtVKiR~G~~e~~~~ 328 (540)
+++...+-|+... +.|+|.||||+|.+. ....+.+.++ |+++++.+++||+|-..-
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~g~~~------------v~~~eem~rvv~~i~~~~~~~~vpisIDT~~-------- 93 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNMDDGL------------LDARTEMTTFLNLIMSEPEIARVPVMIDSSK-------- 93 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEECCCTT------------SCHHHHHHHHHHHHHTCHHHHTSCEEEECSC--------
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCCCC------------CCHHHHHHHHHHHHHHhhhcCCCeEEEeCCC--------
Confidence 3566666666655 579999999985322 2223344444 444445568999995531
Q ss_pred HHHHHHHHHH--cCCcEEE-EecccccCccCCCcCHHHHHHHHHHcCCCceEEEe-----CCCCCHHH
Q 009196 329 IDSLIADIGT--WGASAVT-VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGN-----GDIYSYLD 388 (540)
Q Consensus 329 ~~~la~~lee--aGvdaIt-VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgN-----GdI~s~eD 388 (540)
.++++...+ +|++.|. |++-. +...++.+..+.+.. ..|||+- |.-.+.++
T Consensus 94 -~~V~eaaL~~~~Ga~iINdIs~~~------~d~~~~~~~~l~a~~--ga~vV~mh~d~~G~p~t~~~ 152 (300)
T 3k13_A 94 -WEVIEAGLKCLQGKSIVNSISLKE------GEEVFLEHARIIKQY--GAATVVMAFDEKGQADTAAR 152 (300)
T ss_dssp -HHHHHHHHHHCSSCCEEEEECSTT------CHHHHHHHHHHHHHH--TCEEEEESEETTEECCSHHH
T ss_pred -HHHHHHHHHhcCCCCEEEeCCccc------CChhHHHHHHHHHHh--CCeEEEEeeCCCCCCCCHHH
Confidence 234444444 6888663 33211 122343445555555 5677753 44455554
No 448
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=89.66 E-value=0.52 Score=47.67 Aligned_cols=87 Identities=14% Similarity=0.081 Sum_probs=60.9
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ....++.+.+.+.+++||| |.|...+ +++.++ .++ .||
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st-~~ai~la~~A~~-~Ga 108 (306)
T 1o5k_A 31 DLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNST-EKTLKLVKQAEK-LGA 108 (306)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCH-HHHHHHHHHHHH-HTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccH-HHHHHHHHHHHh-cCC
Confidence 34667889999999999999999988765443222 2345666666665579987 5555544 444432 233 699
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--+.+..|.
T Consensus 109 davlv~~P~y~~~s 122 (306)
T 1o5k_A 109 NGVLVVTPYYNKPT 122 (306)
T ss_dssp SEEEEECCCSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988888774
No 449
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=89.64 E-value=0.46 Score=48.34 Aligned_cols=88 Identities=9% Similarity=-0.028 Sum_probs=61.3
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHH---HhcCCCcC
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~---l~~~~gaD 400 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+++.+.+++|||+.=+=.+.+++.++ .++ .|||
T Consensus 43 D~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~-~Gad 121 (315)
T 3na8_A 43 DLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAES-LGAE 121 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH-TTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh-cCCC
Confidence 34677888999999999999999988765432222 235566667766657998854444455555443 334 7999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+.-..+..|.
T Consensus 122 avlv~~P~y~~~s 134 (315)
T 3na8_A 122 AVMVLPISYWKLN 134 (315)
T ss_dssp EEEECCCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988888774
No 450
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.62 E-value=2.6 Score=39.19 Aligned_cols=124 Identities=15% Similarity=0.029 Sum_probs=69.5
Q ss_pred ecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCCh
Q 009196 248 ICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGK 326 (540)
Q Consensus 248 L~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~ 326 (540)
+-..+.++..+.++.+. . |+|.|+|+++. . ... | + ++++.+++.. +.|+.+-+-.. +.
T Consensus 7 ~d~~~~~~~~~~~~~~~-~-~v~~iev~~~~--~--~~~--g------~----~~i~~l~~~~~~~~i~~~l~~~---di 65 (207)
T 3ajx_A 7 IDLLSTEAALELAGKVA-E-YVDIIELGTPL--I--KAE--G------L----SVITAVKKAHPDKIVFADMKTM---DA 65 (207)
T ss_dssp ECCSCHHHHHHHHHHHG-G-GCSEEEECHHH--H--HHH--C------T----HHHHHHHHHSTTSEEEEEEEEC---SC
T ss_pred eCCCCHHHHHHHHHHhh-c-cCCEEEECcHH--H--Hhh--C------H----HHHHHHHHhCCCCeEEEEEEec---Cc
Confidence 33457788888887776 4 88999995432 1 111 2 2 3566676666 77877622221 11
Q ss_pred hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCH-HHHHHHHHHcCCCceE-EEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 327 NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADW-DYIYQCARKASDDLQV-LGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 327 ~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw-~~I~~i~~~~~~~IPV-IgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
...+++.+.++|+|+|++|.-... ... ..+..+++ . .+++ +..-...++++..+.+.. .|+|.|-+
T Consensus 66 --~~~~~~~a~~~Gad~v~vh~~~~~------~~~~~~~~~~~~-~--g~~~gv~~~s~~~p~~~~~~~~~-~g~d~v~~ 133 (207)
T 3ajx_A 66 --GELEADIAFKAGADLVTVLGSADD------STIAGAVKAAQA-H--NKGVVVDLIGIEDKATRAQEVRA-LGAKFVEM 133 (207)
T ss_dssp --HHHHHHHHHHTTCSEEEEETTSCH------HHHHHHHHHHHH-H--TCEEEEECTTCSSHHHHHHHHHH-TTCSEEEE
T ss_pred --cHHHHHHHHhCCCCEEEEeccCCh------HHHHHHHHHHHH-c--CCceEEEEecCCChHHHHHHHHH-hCCCEEEE
Confidence 233578888999999999974321 112 22333333 2 3554 212233366663333444 57998844
No 451
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.58 E-value=0.44 Score=48.46 Aligned_cols=88 Identities=11% Similarity=0.079 Sum_probs=61.2
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHH---HhcCCCcC
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~---l~~~~gaD 400 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+++.+.+++|||+.=+-.+..++.++ .++ .|||
T Consensus 41 D~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~-~Gad 119 (315)
T 3si9_A 41 DEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEK-AGAD 119 (315)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH-TTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHh-cCCC
Confidence 34577888999999999999999887665432222 234566667766667998854444455555442 334 7999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+.-..+.+|.
T Consensus 120 avlv~~P~y~~~~ 132 (315)
T 3si9_A 120 AVLVVTPYYNRPN 132 (315)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEECCCCCCCCC
Confidence 9999988887773
No 452
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=89.56 E-value=0.44 Score=48.00 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=60.6
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ....++.+.+.+.+++||| |.|...+ +++.++ .++ .||
T Consensus 19 D~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t-~~ai~la~~A~~-~Ga 96 (297)
T 2rfg_A 19 DEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNP-VEAVRYAQHAQQ-AGA 96 (297)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSH-HHHHHHHHHHHH-HTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCH-HHHHHHHHHHHh-cCC
Confidence 34567788999999999999999888765443222 2355666666666579987 5555544 444432 234 699
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--..+..|.
T Consensus 97 davlv~~P~y~~~s 110 (297)
T 2rfg_A 97 DAVLCVAGYYNRPS 110 (297)
T ss_dssp SEEEECCCTTTCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999998888774
No 453
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=89.52 E-value=3.4 Score=41.25 Aligned_cols=115 Identities=10% Similarity=0.143 Sum_probs=77.0
Q ss_pred cCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCC---cCH
Q 009196 285 NKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKL---ADW 361 (540)
Q Consensus 285 ~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~---adw 361 (540)
+...|=.+..+.+++..+++.++++ ++.||+-|-.. .+-++...+.|++.|-+|...-..-|... ..+
T Consensus 130 TTegGlDv~~~~~~L~~~i~~L~~~-GIrVSLFIDpd--------~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el 200 (278)
T 3gk0_A 130 TTEGGLDVVGHFDAVRAACKQLADA-GVRVSLFIDPD--------EAQIRAAHETGAPVIELHTGRYADAHDAAEQQREF 200 (278)
T ss_dssp CSSSSBCTTTTHHHHHHHHHHHHHT-TCEEEEEECSC--------HHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHH
T ss_pred CCCcchhhhccHHHHHHHHHHHHHC-CCEEEEEeCCC--------HHHHHHHHHhCcCEEEEecchhhccCCchhHHHHH
Confidence 3455667788999999999998774 88888877431 23456667889999999965322222211 112
Q ss_pred HHHHHH---HHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCC
Q 009196 362 DYIYQC---ARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIKP 412 (540)
Q Consensus 362 ~~I~~i---~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nP 412 (540)
..+... +... .+-|=+..|+ +++.+..+ ...+++.-|-||.+++.+-
T Consensus 201 ~rl~~aA~~A~~l--GL~VnAGHGL-~y~Nv~~i-a~ip~i~ElnIGHaiIa~A 250 (278)
T 3gk0_A 201 ERIATGVDAGIAL--GLKVNAGHGL-HYTNVQAI-AALPGIAELNIGHAIVAHA 250 (278)
T ss_dssp HHHHHHHHHHHHT--TCEEEECTTC-CTTTHHHH-HTCTTEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHc--CCEEecCCCC-CHHHHHHH-HhCCCCeEEecCHHHHHHH
Confidence 222222 2334 5788888887 77777664 3458999999999987654
No 454
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=89.51 E-value=0.47 Score=47.58 Aligned_cols=87 Identities=13% Similarity=0.102 Sum_probs=60.7
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHH---HhcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKH---KSDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~---l~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++|||+.=+-.+.+++.++ .++ .|||+
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~-~Gada 99 (291)
T 3tak_A 21 WKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKD-LGADA 99 (291)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHh-cCCCE
Confidence 4567788889999999999998887665432222 234566666766667998854444455555443 334 79999
Q ss_pred eeecHHHHhCCC
Q 009196 402 CMIARGALIKPW 413 (540)
Q Consensus 402 VMIGRgaL~nPw 413 (540)
||+.-+.+.+|.
T Consensus 100 vlv~~P~y~~~~ 111 (291)
T 3tak_A 100 ALLVTPYYNKPT 111 (291)
T ss_dssp EEEECCCSSCCC
T ss_pred EEEcCCCCCCCC
Confidence 999988888874
No 455
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=89.40 E-value=1.5 Score=44.53 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=67.8
Q ss_pred CchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCC
Q 009196 295 KPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDD 374 (540)
Q Consensus 295 ~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~ 374 (540)
.++.+.+.++.+++.++.|+.|-+-.. . ....+.++.+.++|++.|.+|+... .+++..+++ . +
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~---~~~~~~~~~a~~~g~d~V~~~~g~p---------~~~i~~l~~-~--g 110 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S---PFVEDIVDLVIEEGVKVVTTGAGNP---------SKYMERFHE-A--G 110 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S---TTHHHHHHHHHHTTCSEEEECSSCG---------GGTHHHHHH-T--T
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C---CCHHHHHHHHHHCCCCEEEECCCCh---------HHHHHHHHH-c--C
Confidence 567778888888877778988876542 1 2356778888999999999997421 245677766 3 5
Q ss_pred ceEEEeCCCCCHHHHHHHHhcCCCcCeeee-cH
Q 009196 375 LQVLGNGDIYSYLDWNKHKSDCPELASCMI-AR 406 (540)
Q Consensus 375 IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI-GR 406 (540)
+||+. .|.+.+++..+.+ .|+|+|.+ |+
T Consensus 111 ~~v~~--~v~~~~~a~~~~~--~GaD~i~v~g~ 139 (332)
T 2z6i_A 111 IIVIP--VVPSVALAKRMEK--IGADAVIAEGM 139 (332)
T ss_dssp CEEEE--EESSHHHHHHHHH--TTCSCEEEECT
T ss_pred CeEEE--EeCCHHHHHHHHH--cCCCEEEEECC
Confidence 88885 4789999887655 78999988 54
No 456
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.37 E-value=0.46 Score=48.69 Aligned_cols=87 Identities=14% Similarity=0.066 Sum_probs=60.8
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHH--HHhcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNK--HKSDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~--~l~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+++.+.+++||| |.|...+.+.+.. ..++ .|||+
T Consensus 54 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~-~Gada 132 (332)
T 2r8w_A 54 IEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEA-AGADA 132 (332)
T ss_dssp HHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh-cCCCE
Confidence 4567788999999999999999988765442222 2355666677766579997 6676655444322 2234 69999
Q ss_pred eeecHHHHhCCC
Q 009196 402 CMIARGALIKPW 413 (540)
Q Consensus 402 VMIGRgaL~nPw 413 (540)
||+.-..+..|.
T Consensus 133 vlv~~P~Y~~~s 144 (332)
T 2r8w_A 133 LLLAPVSYTPLT 144 (332)
T ss_dssp EEECCCCSSCCC
T ss_pred EEECCCCCCCCC
Confidence 999988877763
No 457
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=89.25 E-value=6.1 Score=39.80 Aligned_cols=138 Identities=14% Similarity=0.187 Sum_probs=93.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecC--C
Q 009196 244 FGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRT--G 321 (540)
Q Consensus 244 ~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~--G 321 (540)
+.+-+|..+++....|. .+|+|-|||+.+-.. .| | .|.. .+++.+++.+++||-|=||. |
T Consensus 40 ~~lEvc~~s~~~a~~A~-----~gGAdRIELc~~l~~-----GG----l--TPS~--g~i~~a~~~~~ipV~vMIRPRgG 101 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAE-----RGGADRIELCSGLSE-----GG----T--TPSM--GVLQVVKQSVQIPVFVMIRPRGG 101 (287)
T ss_dssp SEEEEEESSHHHHHHHH-----HHTCSEEEECBCGGG-----TC----B--CCCH--HHHHHHHTTCCSCEEEECCSSSS
T ss_pred ceEEEEeCCHHHHHHHH-----HhCCCEEEECCCCCC-----CC----C--CCCH--HHHHHHHHhcCCCeEEEEecCCC
Confidence 56888988887765543 469999999732211 11 1 1221 34566666678999988886 2
Q ss_pred -CCCCh---hHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC---CHHHHHHHHh
Q 009196 322 -YFEGK---NRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY---SYLDWNKHKS 394 (540)
Q Consensus 322 -~~e~~---~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~---s~eDa~~~l~ 394 (540)
+.-+. +...+-+..+.++|++.|+++.=+.+ +..|.+...++.+... .++|..+=-+. ++..+.+.+.
T Consensus 102 dF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~d----g~iD~~~~~~Li~~a~-~l~vTFHRAFD~~~d~~~Ale~Li 176 (287)
T 3iwp_A 102 DFLYSDREIEVMKADIRLAKLYGADGLVFGALTED----GHIDKELCMSLMAICR-PLPVTFHRAFDMVHDPMAALETLL 176 (287)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----SCBCHHHHHHHHHHHT-TSCEEECGGGGGCSCHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCC----CCcCHHHHHHHHHHcC-CCcEEEECchhccCCHHHHHHHHH
Confidence 21222 34455667788999999999865443 4478888888887765 68888886643 5788888777
Q ss_pred cCCCcCeeeec
Q 009196 395 DCPELASCMIA 405 (540)
Q Consensus 395 ~~~gaDgVMIG 405 (540)
+ .|+|.|..+
T Consensus 177 ~-lGvdrILTS 186 (287)
T 3iwp_A 177 T-LGFERVLTS 186 (287)
T ss_dssp H-HTCSEEEEC
T ss_pred H-cCCCEEECC
Confidence 6 599999874
No 458
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.08 E-value=0.66 Score=46.99 Aligned_cols=83 Identities=6% Similarity=-0.111 Sum_probs=57.8
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEe-CCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGN-GDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgN-GdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++|||+. |...+ .++.++ .++ .||
T Consensus 27 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t-~~ai~la~~A~~-~Ga 104 (309)
T 3fkr_A 27 DLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYST-QVCAARSLRAQQ-LGA 104 (309)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSH-HHHHHHHHHHHH-TTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchH-HHHHHHHHHHHH-cCC
Confidence 34677888999999999999999988765442222 235566667766667999954 55544 444432 234 799
Q ss_pred CeeeecHHHH
Q 009196 400 ASCMIARGAL 409 (540)
Q Consensus 400 DgVMIGRgaL 409 (540)
|+||+--+.+
T Consensus 105 davlv~~Pyy 114 (309)
T 3fkr_A 105 AMVMAMPPYH 114 (309)
T ss_dssp SEEEECCSCB
T ss_pred CEEEEcCCCC
Confidence 9999988766
No 459
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=89.02 E-value=1.3 Score=45.97 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=59.7
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEeccccc-------------------------------Cc-----
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQ-------------------------------QR----- 354 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~-------------------------------q~----- 354 (540)
+.|+.+-+=.. .+.....+++++++++|+++|.||--+.. +.
T Consensus 132 ~~~~~~QLy~~--~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~ 209 (368)
T 2nli_A 132 GGPRWFQIYMA--KDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIY 209 (368)
T ss_dssp TCCEEEEECCB--SSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----C
T ss_pred CCCEEEEEecc--CCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhh
Confidence 45666654221 23456677788888888888877643110 00
Q ss_pred --cCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 355 --YSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 355 --y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
......|+.|+.+++.+ ++||+.-| |.+++++..+.+ .|||+|.|
T Consensus 210 ~~~d~~~~~~~i~~lr~~~--~~PvivK~-v~~~e~a~~a~~--~Gad~I~v 256 (368)
T 2nli_A 210 GASKQKISPRDIEEIAGHS--GLPVFVKG-IQHPEDADMAIK--RGASGIWV 256 (368)
T ss_dssp TTBCSBCCHHHHHHHHHHS--SSCEEEEE-ECSHHHHHHHHH--TTCSEEEE
T ss_pred hccCchhhHHHHHHHHHHc--CCCEEEEc-CCCHHHHHHHHH--cCCCEEEE
Confidence 02234699999999998 69999765 689999988765 79999988
No 460
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=88.97 E-value=3.2 Score=40.94 Aligned_cols=143 Identities=10% Similarity=0.027 Sum_probs=91.9
Q ss_pred CeEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecC
Q 009196 242 DLFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRT 320 (540)
Q Consensus 242 ~p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~ 320 (540)
..+.+-|.+.+.+++...++.+. ..|+|.||+-.-+=.+ ..+.+.+.+.+..+++.+ ++|+.+=+|.
T Consensus 20 p~Icv~l~~~~~~e~~~~~~~~~-~~~~D~vElRvD~l~~-----------~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt 87 (257)
T 2yr1_A 20 PCICAPVVGEDDRKVLREAEEVC-RKQPDLLEWRADFFRA-----------IDDQERVLATANGLRNIAGEIPILFTIRS 87 (257)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHH-HSCCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHSSSCCEEEECCC
T ss_pred cEEEEEecCCCHHHHHHHHHHHh-hcCCCEEEEEeecccc-----------cCcHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 46889999999999877777765 5699999996432100 123567888888888877 7899998897
Q ss_pred CC------CCChhHHHHHHHHHHHcC-CcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC-C---CCCHHHH
Q 009196 321 GY------FEGKNRIDSLIADIGTWG-ASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG-D---IYSYLDW 389 (540)
Q Consensus 321 G~------~e~~~~~~~la~~leeaG-vdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG-d---I~s~eDa 389 (540)
-+ ..+.+...++.+.+.+.| +++|.|--.. .. ....+.+.+... ++.||++= | --+.+++
T Consensus 88 ~~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~------~~-~~~~l~~~~~~~--~~kvI~S~Hdf~~tP~~~el 158 (257)
T 2yr1_A 88 EREGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAY------GE-RIADVRRMTEEC--SVWLVVSRHYFDGTPRKETL 158 (257)
T ss_dssp TTTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGG------TT-HHHHHHHHHHHT--TCEEEEEEEESSCCCCHHHH
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCC------Ch-hHHHHHHHHHhC--CCEEEEEecCCCCCcCHHHH
Confidence 43 234567888888888888 9999995432 11 111122212222 56777663 2 2234555
Q ss_pred HHHHhc--CCCcCeeeec
Q 009196 390 NKHKSD--CPELASCMIA 405 (540)
Q Consensus 390 ~~~l~~--~~gaDgVMIG 405 (540)
...+.+ ..|||.|=|+
T Consensus 159 ~~~~~~~~~~gaDivKia 176 (257)
T 2yr1_A 159 LADMRQAERYGADIAKVA 176 (257)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEE
Confidence 544332 1688877665
No 461
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.97 E-value=0.87 Score=46.03 Aligned_cols=85 Identities=8% Similarity=0.139 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH---HHhcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNK---HKSDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~---~l~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+.|-|.+..+-... ..+.++.+++.+..++|||+.=+-.+.+++.+ ..++ .|||+
T Consensus 34 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~-~Gada 112 (307)
T 3s5o_A 34 YGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQ-VGADA 112 (307)
T ss_dssp HHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHH-TTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHH-cCCCE
Confidence 4567788888999999999999988765442222 34566777777766899875434345554443 2334 79999
Q ss_pred eeecHHHHhC
Q 009196 402 CMIARGALIK 411 (540)
Q Consensus 402 VMIGRgaL~n 411 (540)
||+--..+..
T Consensus 113 vlv~~P~y~~ 122 (307)
T 3s5o_A 113 AMVVTPCYYR 122 (307)
T ss_dssp EEEECCCTTG
T ss_pred EEEcCCCcCC
Confidence 9998777764
No 462
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.87 E-value=0.49 Score=47.48 Aligned_cols=88 Identities=14% Similarity=0.084 Sum_probs=60.8
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHH--HHhcCCCcC
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNK--HKSDCPELA 400 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~--~l~~~~gaD 400 (540)
+.+....+++.+.+.|++.|.+.|-|.+..+-... ....++.+.+.+.+++||| |.|+..+.+.+.. ..++ .|||
T Consensus 19 D~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~-~Gad 97 (292)
T 2vc6_A 19 DEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQN-AGAD 97 (292)
T ss_dssp CHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH-TTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHH-cCCC
Confidence 34567788999999999999999888765443222 2355666666665579987 5666554443322 2334 7999
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+--..+..|.
T Consensus 98 avlv~~P~y~~~s 110 (292)
T 2vc6_A 98 GVLIVSPYYNKPT 110 (292)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999998887773
No 463
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=88.85 E-value=2.3 Score=43.07 Aligned_cols=84 Identities=8% Similarity=0.006 Sum_probs=56.1
Q ss_pred HHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEE
Q 009196 301 GIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLG 379 (540)
Q Consensus 301 eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIg 379 (540)
+.++.+++.. ..|+.|-++. . +=+..+.++|+|.|-+..- ..+.++++.+.+..++.+.+
T Consensus 196 ~Av~~ar~~~p~~kIeVEv~t-----l----~e~~eAl~aGaDiImLDn~----------s~~~l~~av~~~~~~v~lea 256 (300)
T 3l0g_A 196 LAIQRLRKNLKNEYIAIECDN-----I----SQVEESLSNNVDMILLDNM----------SISEIKKAVDIVNGKSVLEV 256 (300)
T ss_dssp HHHHHHHHHSSSCCEEEEESS-----H----HHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHHHHhCCCCCEEEEECC-----H----HHHHHHHHcCCCEEEECCC----------CHHHHHHHHHhhcCceEEEE
Confidence 4445555443 4566664443 1 2234455689999998642 22456666655545799999
Q ss_pred eCCCCCHHHHHHHHhcCCCcCeeeecH
Q 009196 380 NGDIYSYLDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 380 NGdI~s~eDa~~~l~~~~gaDgVMIGR 406 (540)
+||| +.+.+.++.+ +|+|.+.+|.
T Consensus 257 SGGI-t~~~i~~~A~--tGVD~IsvGa 280 (300)
T 3l0g_A 257 SGCV-NIRNVRNIAL--TGVDYISIGC 280 (300)
T ss_dssp ESSC-CTTTHHHHHT--TTCSEEECGG
T ss_pred ECCC-CHHHHHHHHH--cCCCEEEeCc
Confidence 9999 8888888654 8999999993
No 464
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=88.85 E-value=0.54 Score=48.43 Aligned_cols=87 Identities=13% Similarity=0.043 Sum_probs=60.7
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+++.+.+++||| |.|.. +.+++.++ .++ .||
T Consensus 50 D~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~-st~eai~la~~A~~-~Ga 127 (343)
T 2v9d_A 50 DKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGT-NARETIELSQHAQQ-AGA 127 (343)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSS-CHHHHHHHHHHHHH-HTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC-CHHHHHHHHHHHHh-cCC
Confidence 34567788999999999999999988765442222 2355666676665579987 55555 44444432 233 699
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--..+..|.
T Consensus 128 davlv~~P~Y~~~s 141 (343)
T 2v9d_A 128 DGIVVINPYYWKVS 141 (343)
T ss_dssp SEEEEECCSSSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999999888873
No 465
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=88.79 E-value=0.82 Score=46.72 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=48.3
Q ss_pred CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHH
Q 009196 251 AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 251 ~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~ 330 (540)
.+++...+-|+.+. +.|+|.||||+-.--+....++-.-......+++..+|+++++.+++||+|-..- .
T Consensus 46 ~~~~~al~~A~~~v-~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~---------~ 115 (314)
T 3tr9_A 46 LDLNSALRTAEKMV-DEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR---------P 115 (314)
T ss_dssp CSHHHHHHHHHHHH-HTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC---------H
T ss_pred CCHHHHHHHHHHHH-HCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC---------H
Confidence 35677666666665 5699999998522111000000001112344567788888888789999996542 2
Q ss_pred HHHHHHHHcCCcEE
Q 009196 331 SLIADIGTWGASAV 344 (540)
Q Consensus 331 ~la~~leeaGvdaI 344 (540)
++++...++|++.|
T Consensus 116 ~Va~aAl~aGa~iI 129 (314)
T 3tr9_A 116 RVMREAVNTGADMI 129 (314)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEE
Confidence 34445555576655
No 466
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=88.54 E-value=1.6 Score=43.58 Aligned_cols=87 Identities=7% Similarity=-0.052 Sum_probs=56.3
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCc-EEEEecccccC----ccCCCc--CHHHHHHHHHHcCCCceEEE--eC
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGAS-AVTVHGRTRQQ----RYSKLA--DWDYIYQCARKASDDLQVLG--NG 381 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvd-aItVHgRtr~q----~y~g~a--dw~~I~~i~~~~~~~IPVIg--NG 381 (540)
+.|+.+=+. | ...++..+.++++.++|+| +|.||--.... .|.+.. -++.++.+++.+ ++||+. +.
T Consensus 93 ~~p~~~~i~-g--~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~ 167 (311)
T 1jub_A 93 EGPIFFSIA-G--MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPP 167 (311)
T ss_dssp SSCCEEEEC-C--SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECC
T ss_pred CCCEEEEcC-C--CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECC
Confidence 678888665 2 2457889999999999999 99998532111 111111 145666666666 588874 55
Q ss_pred CCCCHHHH---HHHHhcCCCcCeeee
Q 009196 382 DIYSYLDW---NKHKSDCPELASCMI 404 (540)
Q Consensus 382 dI~s~eDa---~~~l~~~~gaDgVMI 404 (540)
++ +.+++ .+.+.+ .|+|+|.+
T Consensus 168 ~~-~~~~~~~~a~~~~~-~G~d~i~v 191 (311)
T 1jub_A 168 YF-DLVHFDIMAEILNQ-FPLTYVNS 191 (311)
T ss_dssp CC-SHHHHHHHHHHHTT-SCCCEEEE
T ss_pred CC-CHHHHHHHHHHHHH-cCCcEEEe
Confidence 65 55554 444555 79999865
No 467
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=88.50 E-value=2.9 Score=38.92 Aligned_cols=124 Identities=18% Similarity=0.094 Sum_probs=73.0
Q ss_pred EEecC--CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc-ccccEEE--EecC
Q 009196 246 VQICG--AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT-VDKPITI--KVRT 320 (540)
Q Consensus 246 vQL~G--~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~-v~iPVtV--KiR~ 320 (540)
+|++. .+.++..+.++.+. .|+|.|++.. |.. ...| .++++.+++. .++||.+ |+..
T Consensus 3 li~a~D~~~~~~~~~~~~~~~--~~~diie~G~--p~~--~~~g------------~~~i~~ir~~~~~~~i~~~~~~~~ 64 (211)
T 3f4w_A 3 LQLALDELTLPEAMVFMDKVV--DDVDIIEVGT--PFL--IREG------------VNAIKAIKEKYPHKEVLADAKIMD 64 (211)
T ss_dssp EEEEECSCCHHHHHHHHHHHG--GGCSEEEECH--HHH--HHHT------------THHHHHHHHHCTTSEEEEEEEECS
T ss_pred EEEEeCCCCHHHHHHHHHHhh--cCccEEEeCc--HHH--Hhcc------------HHHHHHHHHhCCCCEEEEEEEecc
Confidence 34554 35666677776664 3899999954 432 1112 2567777766 4777754 4432
Q ss_pred CCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCH-HHHHHHHHHcCCCceEEEe-CCCCCH-HHHHHHHhcCC
Q 009196 321 GYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADW-DYIYQCARKASDDLQVLGN-GDIYSY-LDWNKHKSDCP 397 (540)
Q Consensus 321 G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw-~~I~~i~~~~~~~IPVIgN-GdI~s~-eDa~~~l~~~~ 397 (540)
+ ...+++.+.++|+++|++|.-.. ..+. +.+..+++ . .++++.. =...++ +.+..+++ .
T Consensus 65 ~-------~~~~~~~~~~~Gad~v~v~~~~~------~~~~~~~~~~~~~-~--g~~~~v~~~~~~t~~~~~~~~~~--~ 126 (211)
T 3f4w_A 65 G-------GHFESQLLFDAGADYVTVLGVTD------VLTIQSCIRAAKE-A--GKQVVVDMICVDDLPARVRLLEE--A 126 (211)
T ss_dssp C-------HHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHH-H--TCEEEEECTTCSSHHHHHHHHHH--H
T ss_pred c-------hHHHHHHHHhcCCCEEEEeCCCC------hhHHHHHHHHHHH-c--CCeEEEEecCCCCHHHHHHHHHH--c
Confidence 2 12458889999999999997531 1222 34444444 3 3666541 234555 44555554 6
Q ss_pred CcCeeeec
Q 009196 398 ELASCMIA 405 (540)
Q Consensus 398 gaDgVMIG 405 (540)
|+|.|.+.
T Consensus 127 g~d~i~v~ 134 (211)
T 3f4w_A 127 GADMLAVH 134 (211)
T ss_dssp TCCEEEEE
T ss_pred CCCEEEEc
Confidence 89998764
No 468
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=88.49 E-value=0.88 Score=47.34 Aligned_cols=85 Identities=16% Similarity=0.075 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEE-eCCCCCHHHHHHH---HhcCCCcC
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLG-NGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIg-NGdI~s~eDa~~~---l~~~~gaD 400 (540)
.+....+++.+.+.|+++|.+-|-|.+..+-... ..+.++.+.+.+.+++|||+ .|.. +.+++.++ .++ .|||
T Consensus 79 ~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~-st~eai~la~~A~~-~Gad 156 (360)
T 4dpp_A 79 LEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSN-STREAIHATEQGFA-VGMH 156 (360)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCS-SHHHHHHHHHHHHH-TTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCC-CHHHHHHHHHHHHH-cCCC
Confidence 4567888899999999999999888765442222 23456666776666799985 5554 55554443 234 7999
Q ss_pred eeeecHHHHhCC
Q 009196 401 SCMIARGALIKP 412 (540)
Q Consensus 401 gVMIGRgaL~nP 412 (540)
+||+--..+..|
T Consensus 157 avlvv~PyY~k~ 168 (360)
T 4dpp_A 157 AALHINPYYGKT 168 (360)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999988777666
No 469
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=88.43 E-value=6.7 Score=40.67 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=55.6
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRI 329 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~ 329 (540)
|.+.+.+-++.+. +.|+|+|=++.. .|-+..| ..+.-.++++.+.+.+ .+||.+-+ |- .+..++
T Consensus 78 D~~al~~lv~~li-~~Gv~Gl~v~GT--------TGE~~~L--s~eEr~~vi~~~ve~~~grvpViaGv--g~-~st~ea 143 (360)
T 4dpp_A 78 DLEAYDDLVNIQI-QNGAEGVIVGGT--------TGEGQLM--SWDEHIMLIGHTVNCFGGSIKVIGNT--GS-NSTREA 143 (360)
T ss_dssp CHHHHHHHHHHHH-HTTCCEEEESST--------TTTGGGS--CHHHHHHHHHHHHHHHTTTSEEEEEC--CC-SSHHHH
T ss_pred CHHHHHHHHHHHH-HcCCCEEEeccc--------ccChhhC--CHHHHHHHHHHHHHHhCCCCeEEEec--CC-CCHHHH
Confidence 5677888888777 579999988631 2223222 2333345555555544 47888854 32 356789
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 009196 330 DSLIADIGTWGASAVTVH 347 (540)
Q Consensus 330 ~~la~~leeaGvdaItVH 347 (540)
+++++.++++|+|++.+.
T Consensus 144 i~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 144 IHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 999999999999999885
No 470
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=88.37 E-value=1.7 Score=43.92 Aligned_cols=105 Identities=11% Similarity=0.120 Sum_probs=68.7
Q ss_pred cccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCC------cEEE-EecccccCccCCC-cC
Q 009196 289 GSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGA------SAVT-VHGRTRQQRYSKL-AD 360 (540)
Q Consensus 289 GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGv------daIt-VHgRtr~q~y~g~-ad 360 (540)
||..+++.+++.+ +. .+++||.+|.-+.. +..+....+..+.+.|. .-|+ +|..+.. .|... .|
T Consensus 114 gA~~~~n~~LLr~----~a-~~gkPVilK~G~~~--t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y-~~~~~~vd 185 (288)
T 3tml_A 114 PAFLCRQTDFIHA----CA-RSGKPVNIKKGQFL--APHDMKNVIDKARDAAREAGLSEDRFMACERGVSF-GYNNLVSD 185 (288)
T ss_dssp CGGGTTCHHHHHH----HH-TSSSCEEEECCTTC--CTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEEC-SSSCEECC
T ss_pred CcccccCHHHHHH----HH-ccCCcEEEeCCCCC--CHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCC-CCCcCcCC
Confidence 7888899886554 33 46899999887642 34566777888888886 5455 4544432 34332 48
Q ss_pred HHHHHHHHHHcCCCceEEEe---------------CCCCCH--HHHHHHHhcCCCcCeeeecH
Q 009196 361 WDYIYQCARKASDDLQVLGN---------------GDIYSY--LDWNKHKSDCPELASCMIAR 406 (540)
Q Consensus 361 w~~I~~i~~~~~~~IPVIgN---------------GdI~s~--eDa~~~l~~~~gaDgVMIGR 406 (540)
+..+..+++ + ++||+.. ||-... .-+..++. .||||+||=+
T Consensus 186 l~~i~~lk~-~--~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAvA--~GadGl~iE~ 243 (288)
T 3tml_A 186 MRSLAIMRE-T--NAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAVA--TGVAGLFMET 243 (288)
T ss_dssp HHHHHHGGG-G--SSCEEEEHHHHTCCCC--------CTTHHHHHHHHHHH--HCCSEEEEEE
T ss_pred HHHHHHHHh-c--CCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHHH--cCCCEEEEee
Confidence 999999887 7 7999884 343332 23445555 6999999863
No 471
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=88.30 E-value=2.1 Score=45.00 Aligned_cols=96 Identities=9% Similarity=0.091 Sum_probs=71.0
Q ss_pred HHHHHHHhccccc--ccEEEEecC------CCCCChhHHHHHHHHHHHcCCcE-EEEecccccCccCC---CcCHHHHHH
Q 009196 299 MKGIIEATSGTVD--KPITIKVRT------GYFEGKNRIDSLIADIGTWGASA-VTVHGRTRQQRYSK---LADWDYIYQ 366 (540)
Q Consensus 299 l~eIv~av~~~v~--iPVtVKiR~------G~~e~~~~~~~la~~leeaGvda-ItVHgRtr~q~y~g---~adw~~I~~ 366 (540)
..+.|++++++++ +.+.|-.-- +| +..++.++++.|++.|+.. +.| +|.... +.||+..++
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~--~~~~A~~~~~~L~~~~~~~~l~i-----EqP~~~~~~~~d~~~~~~ 290 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDM--DPVRCAEYIASLEKEAQGLPLYI-----EGPVDAGNKPDQIRMLTA 290 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTT--CHHHHHHHHHHTGGGGTTSCEEE-----ECCCCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCC--CHHHHHHHHHHHHhccCCcceEE-----ECCcCCCCCcccHHHHHH
Confidence 4488999998874 455555444 56 4577889999999876541 222 444321 458898999
Q ss_pred HHHH-----cCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 367 CARK-----ASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 367 i~~~-----~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+++. . ++||.+.=-+++.+++.++++. ..+|.|++
T Consensus 291 l~~~l~~~g~--~ipIa~dE~~~~~~~~~~~i~~-~a~d~i~i 330 (413)
T 1kko_A 291 ITKELTRLGS--GVKIVADEWCNTYQDIVDFTDA-GSCHMVQI 330 (413)
T ss_dssp HHHHHHHHTC--CCEEEECTTCCSHHHHHHHHHT-TCCSEEEE
T ss_pred HHHhcccCCC--CCcEEcCCCCCCHHHHHHHHHh-CCCCEEEe
Confidence 9988 6 6999998889999999998886 77899887
No 472
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.14 E-value=2.9 Score=40.04 Aligned_cols=92 Identities=13% Similarity=0.174 Sum_probs=67.7
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNK 391 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~ 391 (540)
.||..=+|. .+.+++.++++.+.+.|++.|-+.-++ +...+.++++++.++ . .+++.|-|.+.+++..
T Consensus 16 ~~~i~v~r~---~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~-~-~~vgagtvi~~d~~~~ 83 (214)
T 1wbh_A 16 GPVVPVIVV---KKLEHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVP-E-AIVGAGTVLNPQQLAE 83 (214)
T ss_dssp CSEEEEECC---SSGGGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCT-T-SEEEEESCCSHHHHHH
T ss_pred CCEEEEEEC---CCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCc-C-CEEeeCEEEEHHHHHH
Confidence 466665676 245678899999999999999986432 233567888888885 3 4566677999999999
Q ss_pred HHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 392 HKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 392 ~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+++ .|||+|.++ + .++.+....+.
T Consensus 84 A~~--aGAd~v~~p-~--~d~~v~~~~~~ 107 (214)
T 1wbh_A 84 VTE--AGAQFAISP-G--LTEPLLKAATE 107 (214)
T ss_dssp HHH--HTCSCEEES-S--CCHHHHHHHHH
T ss_pred HHH--cCCCEEEcC-C--CCHHHHHHHHH
Confidence 887 699999988 3 45555554443
No 473
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=88.00 E-value=2.7 Score=40.63 Aligned_cols=92 Identities=16% Similarity=0.141 Sum_probs=67.8
Q ss_pred ccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHH
Q 009196 312 KPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNK 391 (540)
Q Consensus 312 iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~ 391 (540)
.|+..=+|. .+.+++.++++.+.+.|++.|.+.-++ +...+.++++++.++ ++ +++.|-+.+.+++..
T Consensus 17 ~~ii~vir~---~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~-~l-~vgaGtvl~~d~~~~ 84 (224)
T 1vhc_A 17 LKIVPVIAL---DNADDILPLADTLAKNGLSVAEITFRS-------EAAADAIRLLRANRP-DF-LIAAGTVLTAEQVVL 84 (224)
T ss_dssp HCEEEEECC---SSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCT-TC-EEEEESCCSHHHHHH
T ss_pred CCeEEEEeC---CCHHHHHHHHHHHHHcCCCEEEEeccC-------chHHHHHHHHHHhCc-Cc-EEeeCcEeeHHHHHH
Confidence 356665676 345678999999999999999995332 234578888988886 44 456667889999999
Q ss_pred HHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 392 HKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 392 ~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+++ .|||+|+++- .++.+....++
T Consensus 85 A~~--aGAd~v~~p~---~d~~v~~~ar~ 108 (224)
T 1vhc_A 85 AKS--SGADFVVTPG---LNPKIVKLCQD 108 (224)
T ss_dssp HHH--HTCSEEECSS---CCHHHHHHHHH
T ss_pred HHH--CCCCEEEECC---CCHHHHHHHHH
Confidence 887 6999998882 56665555554
No 474
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=88.00 E-value=1.6 Score=47.41 Aligned_cols=87 Identities=14% Similarity=0.183 Sum_probs=60.6
Q ss_pred cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEeccccc---------------------------Ccc--------
Q 009196 311 DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQ---------------------------QRY-------- 355 (540)
Q Consensus 311 ~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~---------------------------q~y-------- 355 (540)
+.|..+-+-. ..+.....+++++++++|+++|.||--+.. ..+
T Consensus 246 ~~~~~~QLy~--~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~ 323 (511)
T 1kbi_A 246 KQIQWYQLYV--NSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALS 323 (511)
T ss_dssp SCCEEEEECC--CSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCB
T ss_pred CCCeEEEEee--cCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHh
Confidence 3567776542 234566778888889999998777642100 001
Q ss_pred ---CCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 356 ---SKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 356 ---~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
.....|+.|+.+++.+ ++||+.-| +.+.+++..+.+ .|||+|.|
T Consensus 324 ~~~d~~~~~~~i~~lr~~~--~~PvivKg-v~~~e~A~~a~~--aGad~I~v 370 (511)
T 1kbi_A 324 KFIDPSLTWKDIEELKKKT--KLPIVIKG-VQRTEDVIKAAE--IGVSGVVL 370 (511)
T ss_dssp TTBCTTCCHHHHHHHHHHC--SSCEEEEE-ECSHHHHHHHHH--TTCSEEEE
T ss_pred hccChHhHHHHHHHHHHHh--CCcEEEEe-CCCHHHHHHHHH--cCCCEEEE
Confidence 1123599999999998 69999764 667999988665 79999998
No 475
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=87.96 E-value=0.55 Score=47.69 Aligned_cols=86 Identities=12% Similarity=-0.015 Sum_probs=60.6
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++||| |.|. .+ +++.++ .++ .||
T Consensus 31 D~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-st-~~ai~la~~A~~-~Ga 107 (314)
T 3d0c_A 31 DWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-SV-DTAIELGKSAID-SGA 107 (314)
T ss_dssp CHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SH-HHHHHHHHHHHH-TTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-CH-HHHHHHHHHHHH-cCC
Confidence 34567788999999999999998887765432222 2355666677666579987 7787 44 444432 234 799
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+--+.+..|.
T Consensus 108 davlv~~P~y~~~s 121 (314)
T 3d0c_A 108 DCVMIHQPVHPYIT 121 (314)
T ss_dssp SEEEECCCCCSCCC
T ss_pred CEEEECCCCCCCCC
Confidence 99999988877774
No 476
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=87.81 E-value=5 Score=42.65 Aligned_cols=156 Identities=10% Similarity=0.002 Sum_probs=90.2
Q ss_pred CeEEEEecC--CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc---ccccEEE
Q 009196 242 DLFGVQICG--AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT---VDKPITI 316 (540)
Q Consensus 242 ~p~~vQL~G--~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~---v~iPVtV 316 (540)
.|+++=+=. .++....+.++.+. ++|+.+|.|-=.-+.++.+..-.|-.|....+.+.+ |++++.+ .+.|+.|
T Consensus 149 ~PIiaD~DtGfG~~~nv~~tvk~~i-~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~r-I~AAr~A~~~~g~d~vI 226 (429)
T 1f8m_A 149 APIVADGEAGFGGALNVYELQKALI-AAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRT-LTSARLAADVADVPTVV 226 (429)
T ss_dssp CCEEEECTTTTSSHHHHHHHHHHHH-HTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHH-HHHHHHHHHHTTCCCEE
T ss_pred CCEEEECCCCCCCcHHHHHHHHHHH-HcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHH-HHHHHHHHHhcCCCEEE
Confidence 688776642 23446788888887 799999999754433333332234445443444444 4444443 3566666
Q ss_pred EecCCCC------------------------------CChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHH
Q 009196 317 KVRTGYF------------------------------EGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQ 366 (540)
Q Consensus 317 KiR~G~~------------------------------e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~ 366 (540)
=-|+--. ...+++++=++.+.+ |+|.|-+++. ..+.+.+++
T Consensus 227 iARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~--------~~~~eei~~ 297 (429)
T 1f8m_A 227 IARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETG--------TPDLEAARQ 297 (429)
T ss_dssp EEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCS--------SCCHHHHHH
T ss_pred EEEechhhhccccccccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCC--------CCCHHHHHH
Confidence 6665321 234567777777777 9999999742 356777777
Q ss_pred HHHHcCC---CceEEEeCC-CCCH------HHH---HHHHhcCCCcCeeeecHHHH
Q 009196 367 CARKASD---DLQVLGNGD-IYSY------LDW---NKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 367 i~~~~~~---~IPVIgNGd-I~s~------eDa---~~~l~~~~gaDgVMIGRgaL 409 (540)
+.+.+.. ..++.+|+- .+++ +++ .+-|.+ -|+..+.++-+++
T Consensus 298 f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~-lG~~~v~~~l~~~ 352 (429)
T 1f8m_A 298 FSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAA-MGFKFQFITLAGF 352 (429)
T ss_dssp HHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHHHHHHHHH-HTEEEEEETTHHH
T ss_pred HHHHhcccCCCceeecCCCCCCCcccccchhhHhHHHHHHHH-cCCeEEEECcHHH
Confidence 7776632 123445542 3442 222 122444 5788888876654
No 477
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=87.58 E-value=1.7 Score=43.94 Aligned_cols=122 Identities=11% Similarity=0.137 Sum_probs=82.5
Q ss_pred EecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCC
Q 009196 247 QICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEG 325 (540)
Q Consensus 247 QL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~ 325 (540)
.+.+.+++.+.+.++.+. ..||..+-|..|- + ...+.++++++++ ++.+.|-.--+|+
T Consensus 127 ~~~~~~~e~~~~~a~~~~-~~G~~~~KiKvg~----------------~--~d~~~v~avr~~~~~~~l~vDaN~~~~-- 185 (324)
T 1jpd_X 127 TVVIGTPDQMANSASTLW-QAGAKLLKVKLDN----------------H--LISERMVAIRTAVPDATLIVDANESWR-- 185 (324)
T ss_dssp EECSCCHHHHHHHHHHHH-HTTCSEEEEECCS----------------S--CHHHHHHHHHHHCTTSEEEEECTTCCC--
T ss_pred EeeCCCHHHHHHHHHHHH-HcCCCEEEEEeCC----------------c--hHHHHHHHHHHhCCCCEEEEECcCCCC--
Confidence 345568888887777665 4699999987551 1 1234566776665 4556666666774
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
..++.++++.|++.++.+| +|.. .+.+|+..++++ . ++||.+.=.+++..++.+++. . +|.|.+
T Consensus 186 ~~~a~~~~~~l~~~~i~~i-------EqP~-~~~d~~~~~~l~--~--~ipIa~dE~~~~~~~~~~~~~--~-~~~i~i 249 (324)
T 1jpd_X 186 AEGLAARCQLLADLGVAML-------EQPL-PAQDDAALENFI--H--PLPICADESCHTRSNLKALKG--R-YEMVNI 249 (324)
T ss_dssp STTHHHHHHHHHHTTCCEE-------ECCS-CTTSCGGGGSSC--C--SSCEEESTTCSSGGGHHHHBT--T-BSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-------ECCC-CCCCHHHHHhcc--C--CCCEEEcCCCCCHHHHHHHHh--h-CCEEEE
Confidence 3578899999999988877 3333 223444444442 3 699999888999999999764 2 676665
No 478
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=87.52 E-value=1.1 Score=45.68 Aligned_cols=85 Identities=13% Similarity=0.111 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEE-eCCCCCHHHHHHH---HhcCCCcC
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLG-NGDIYSYLDWNKH---KSDCPELA 400 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIg-NGdI~s~eDa~~~---l~~~~gaD 400 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ....++.+.+.+.+++|||+ .|.. +..++.++ .++ .|||
T Consensus 31 ~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~-~t~~ai~la~~a~~-~Gad 108 (318)
T 3qfe_A 31 LASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAH-STRQVLEHINDASV-AGAN 108 (318)
T ss_dssp HHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCS-SHHHHHHHHHHHHH-HTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCC-CHHHHHHHHHHHHH-cCCC
Confidence 4567888999999999999999988765442222 23556666776666799884 4554 55554442 234 6999
Q ss_pred eeeecHHHHh-CC
Q 009196 401 SCMIARGALI-KP 412 (540)
Q Consensus 401 gVMIGRgaL~-nP 412 (540)
+||+--..+. +|
T Consensus 109 avlv~~P~y~~kp 121 (318)
T 3qfe_A 109 YVLVLPPAYFGKA 121 (318)
T ss_dssp EEEECCCCC---C
T ss_pred EEEEeCCcccCCC
Confidence 9999988655 44
No 479
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=87.24 E-value=1.5 Score=46.91 Aligned_cols=117 Identities=12% Similarity=0.004 Sum_probs=86.3
Q ss_pred CCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEE
Q 009196 267 CTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAV 344 (540)
Q Consensus 267 aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaI 344 (540)
.||..+-|..|.... .|. .+++.-.+.|+++|+++ ++++.|-.-.+| +..++.++++.|++.++.+|
T Consensus 179 ~Gf~~~KlKv~~~~~------~G~---~~~~~di~rv~avRea~G~d~~L~vDaN~~w--t~~~Ai~~~~~Le~~~l~~i 247 (455)
T 3fxg_A 179 MGFWGGKVPLPFCPD------DGH---EGLRKNVEFLRKHREAVGPDFPIMVDCYMSL--NVSYTIELVKACLDLNINWW 247 (455)
T ss_dssp HTCSCEEEECCCCGG------GHH---HHHHHHHHHHHHHHHHHCSSSCEEEECTTCC--CHHHHHHHHHHTGGGCCSEE
T ss_pred cCCCEEEEcCCCCcc------ccc---ccHHHHHHHHHHHHHHhCCCCeEEEeCCCCC--CHHHHHHHHHhcccCCccee
Confidence 499999887542110 011 23456667788898888 578888777788 45788999999999998877
Q ss_pred EEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 345 TVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 345 tVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+|.. .+.|++..+++++.++ .+||.+.=.+.+..++.++++. ..+|.|++
T Consensus 248 -------EEPl-~~dd~~~la~L~~~~~-~iPIA~gEs~~s~~d~~~li~~-~avDiiq~ 297 (455)
T 3fxg_A 248 -------EECL-SPDDTDGFALIKRAHP-TVKFTTGEHEYSRYGFRKLVEG-RNLDIIQP 297 (455)
T ss_dssp -------ECCS-CGGGGGGHHHHHHHCT-TSEEEECTTCCHHHHHHHHHTT-CCCSEECC
T ss_pred -------cCCC-CcchHHHHHHHHHhCC-CCeEECCCccCCHHHHHHHHHc-CCCCEEEE
Confidence 3332 3357788899988874 4888887789999999998875 77888875
No 480
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=87.23 E-value=11 Score=37.11 Aligned_cols=137 Identities=12% Similarity=-0.011 Sum_probs=76.0
Q ss_pred CCCeEEEEec-CCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEe
Q 009196 240 SEDLFGVQIC-GAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKV 318 (540)
Q Consensus 240 ~e~p~~vQL~-G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKi 318 (540)
.+.+++.=+= |--|..+..+++.+....|+|.|.+|. ||+ . ++++...+..+.-|+|=+
T Consensus 75 ~g~~VflDlK~~DI~nTv~~~a~~~~~~lg~d~vTvh~-----------~~G-----~----~~l~~~~~~~~~gv~vL~ 134 (255)
T 3qw3_A 75 AGIPVVLDAKRGDIADTADAYATSAFKHLNAHAITASP-----------YMG-----S----DSLQPFMRYPDKAVFVLC 134 (255)
T ss_dssp TTCCBEEEEEECCCHHHHHHHHHHHHTTSCCSEEEECC-----------TTC-----H----HHHHHHHTCTTSEEEEEE
T ss_pred CCCeEEEEeecCCcHHHHHHHHHHHHHHcCCCEEEEcc-----------cCC-----H----HHHHHHHHhhCCceEEEE
Confidence 3445554443 344667777776664358999999983 332 1 233333333333455544
Q ss_pred cCCCCC-----C-----hhHHHHHHHHHHH----cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCC
Q 009196 319 RTGYFE-----G-----KNRIDSLIADIGT----WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIY 384 (540)
Q Consensus 319 R~G~~e-----~-----~~~~~~la~~lee----aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~ 384 (540)
+++..+ . ......+++.+.. +|.+.+.+.+.. -+.+..+++.++ +.+++. =||.
T Consensus 135 ~tS~~~~~~~q~~~~~~~~~~~~V~~~a~~~~~~~g~~GvV~~at~----------~~e~~~ir~~~~-~~~~l~-PGIg 202 (255)
T 3qw3_A 135 KTSNKGSNDLQCLRVGDRYLYEAVAERAEGPWNVNGNVGLVVGATD----------PVALARVRARAP-TLWFLV-PGIG 202 (255)
T ss_dssp ECCSGGGGTTTTSEETTEEHHHHHHHHHHTGGGGGSCEEEEECSSC----------HHHHHHHHHHCS-SCCEEE-CCC-
T ss_pred eCCCccHHHHHhcccCCCCHHHHHHHHHHHHhhhhCCeEEEECCCC----------HHHHHHHHHHCC-CCeEEE-CCcC
Confidence 443221 0 1123445555444 788888774311 134778888876 345543 3332
Q ss_pred ----CHHHHHHHHhcCCCcC----e--eeecHHHHhCCC
Q 009196 385 ----SYLDWNKHKSDCPELA----S--CMIARGALIKPW 413 (540)
Q Consensus 385 ----s~eDa~~~l~~~~gaD----g--VMIGRgaL~nPw 413 (540)
+++++.+ .|+| + +.|||+.+.-+.
T Consensus 203 ~qg~tp~~a~~-----~G~d~~~~~~livvGR~I~~A~d 236 (255)
T 3qw3_A 203 AQGGSLKASLD-----AGLRADGSGMLINVSRGLARAAD 236 (255)
T ss_dssp ----CHHHHHH-----HHCCTTSCCEEEEESHHHHTSSC
T ss_pred CCCCCHHHHHH-----cCCCcccCeeEEEeChhhcCCCC
Confidence 5666654 3556 5 999999998654
No 481
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=87.21 E-value=0.97 Score=45.82 Aligned_cols=87 Identities=10% Similarity=0.053 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH---hcCCCc-C
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK---SDCPEL-A 400 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l---~~~~ga-D 400 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++|||+.-+-.+.+++.++. ++ .|+ |
T Consensus 27 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~-~Ga~d 105 (311)
T 3h5d_A 27 FDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAE-FGGFA 105 (311)
T ss_dssp TTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHH-SCCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHh-cCCCc
Confidence 3567889999999999999999988765442222 2356666777776679998655544555655432 33 465 9
Q ss_pred eeeecHHHHhCCC
Q 009196 401 SCMIARGALIKPW 413 (540)
Q Consensus 401 gVMIGRgaL~nPw 413 (540)
+||+.-+.+..|.
T Consensus 106 avlv~~P~y~~~s 118 (311)
T 3h5d_A 106 AGLAIVPYYNKPS 118 (311)
T ss_dssp EEEEECCCSSCCC
T ss_pred EEEEcCCCCCCCC
Confidence 9999988887774
No 482
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=87.20 E-value=6.8 Score=38.86 Aligned_cols=125 Identities=13% Similarity=0.094 Sum_probs=82.1
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
|.+.+.+-++.+. +. +|+|=++. ..|-+..-..+.-.++++.+++ .+||.+-+.. .+..++++
T Consensus 17 D~~~l~~lv~~li-~~-v~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg~---~~t~~ai~ 79 (283)
T 2pcq_A 17 DEEAFRELAQALE-PL-VDGLLVYG----------SNGEGVHLTPEERARGLRALRP--RKPFLVGLME---ETLPQAEG 79 (283)
T ss_dssp CHHHHHHHHHHHG-GG-SSCCEETC----------TTTTGGGSCHHHHHHHHHTCCC--SSCCEEEECC---SSHHHHHH
T ss_pred CHHHHHHHHHHHH-hh-CCEEEECC----------cCcCchhcCHHHHHHHHHHHHh--CCcEEEeCCC---CCHHHHHH
Confidence 5677888888776 45 88877652 2233333344555678888877 8899986543 25678999
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCC-c---CHHHHHHHHHHcCCCceEE-Ee-----CCCCCHHHHHHHHhcCCCcCe
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKL-A---DWDYIYQCARKASDDLQVL-GN-----GDIYSYLDWNKHKSDCPELAS 401 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~-a---dw~~I~~i~~~~~~~IPVI-gN-----GdI~s~eDa~~~l~~~~gaDg 401 (540)
+++.++++|+|++.+.. ..|.++ . -.++.+.|++ ++||+ .| |--.+++.+.++.+ .+++-|
T Consensus 80 la~~A~~~Gadavlv~~----P~y~~~~~~~~l~~~f~~va~----~lPiilYn~P~~tg~~l~~~~~~~La~-~pnivg 150 (283)
T 2pcq_A 80 ALLEAKAAGAMALLATP----PRYYHGSLGAGLLRYYEALAE----KMPLFLYHVPQNTKVDLPLEAVEALAP-HPNVLG 150 (283)
T ss_dssp HHHHHHHHTCSEEEECC----CCTTGGGTTTHHHHHHHHHHH----HSCEEEEECHHHHCCCCCHHHHHHHTT-STTEEE
T ss_pred HHHHHHhcCCCEEEecC----CcCCCCCCHHHHHHHHHHHhc----CCCEEEEeCccccCcCCCHHHHHHHhc-CCCEEE
Confidence 99999999999998852 233333 2 2567777777 26765 35 54458888877543 355544
Q ss_pred e
Q 009196 402 C 402 (540)
Q Consensus 402 V 402 (540)
|
T Consensus 151 i 151 (283)
T 2pcq_A 151 I 151 (283)
T ss_dssp E
T ss_pred E
Confidence 4
No 483
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.08 E-value=1.5 Score=44.49 Aligned_cols=84 Identities=20% Similarity=0.127 Sum_probs=57.4
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH---hcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK---SDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l---~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+ +++|||+.=+=.+..++.++. ++ .|||+
T Consensus 28 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~-~Gada 105 (313)
T 3dz1_A 28 DVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMD-AGAAG 105 (313)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHH-cCCCE
Confidence 4567888999999999999999988765432222 245667777777 589999544434555554432 33 69999
Q ss_pred eeecHHHHhCC
Q 009196 402 CMIARGALIKP 412 (540)
Q Consensus 402 VMIGRgaL~nP 412 (540)
||+--.. ..|
T Consensus 106 vlv~~P~-~~~ 115 (313)
T 3dz1_A 106 VMIAPPP-SLR 115 (313)
T ss_dssp EEECCCT-TCC
T ss_pred EEECCCC-CCC
Confidence 9998665 334
No 484
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=86.80 E-value=2.9 Score=42.49 Aligned_cols=110 Identities=8% Similarity=-0.057 Sum_probs=78.3
Q ss_pred CCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEE
Q 009196 267 CTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVT 345 (540)
Q Consensus 267 aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaIt 345 (540)
.||..|-|..| ++ -.+.|+++++++ ++.+.|-.--+|+ ..++ ++++.|++.++.+|
T Consensus 140 ~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~~--~~~A-~~~~~l~~~~i~~i- 196 (342)
T 2okt_A 140 TKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESLD--RQDF-TQLQLLAREQVLYI- 196 (342)
T ss_dssp HCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCCC--GGGH-HHHHHHGGGCEEEE-
T ss_pred cCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCCC--HHHH-HHHHHHhhCCCcEE-
Confidence 49999999764 23 457888898887 4556666666773 4678 99999999877766
Q ss_pred EecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhC
Q 009196 346 VHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIARGALIK 411 (540)
Q Consensus 346 VHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~n 411 (540)
+|.. .+.+++..++ +.. ++||.+.=.+.+..++.++++. ..+|.|++==+-.+-
T Consensus 197 ------EqP~-~~~d~~~~~~--~~~--~ipIa~dEs~~~~~~~~~~i~~-~a~d~i~~k~~~~GG 250 (342)
T 2okt_A 197 ------EEPF-KDISMLDEVA--DGT--IPPIALDEKATSLLDIINLIEL-YNVKVVVLKPFRLGG 250 (342)
T ss_dssp ------ECCC-SSGGGGGGSC--TTS--SCCEEESTTCCCHHHHHHHHHH-SCCCEEEECHHHHTS
T ss_pred ------ECCC-CCccHHHHHH--hcC--CCCEEecCCCCCHHHHHHHHHh-CCCCEEEEChhhcCC
Confidence 3333 2234444444 344 6999999999999999998886 789999875444433
No 485
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=86.67 E-value=2.9 Score=40.43 Aligned_cols=102 Identities=14% Similarity=0.097 Sum_probs=71.5
Q ss_pred HHHHHHHhcccccccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEE
Q 009196 299 MKGIIEATSGTVDKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVL 378 (540)
Q Consensus 299 l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVI 378 (540)
..++++.+.+ .||..=+|. .+.+++.++++.+.+.|++.|.+.-+ .+...+.++++++.++ ++. +
T Consensus 16 ~~~~~~~l~~---~~ii~V~r~---~~~~~~~~~~~al~~gGv~~iel~~k-------~~~~~~~i~~l~~~~~-~~~-i 80 (225)
T 1mxs_A 16 AARIDAICEK---ARILPVITI---AREEDILPLADALAAGGIRTLEVTLR-------SQHGLKAIQVLREQRP-ELC-V 80 (225)
T ss_dssp HHHHHHHHHH---HSEEEEECC---SCGGGHHHHHHHHHHTTCCEEEEESS-------STHHHHHHHHHHHHCT-TSE-E
T ss_pred HHHHHHHHHH---CCEEEEEeC---CCHHHHHHHHHHHHHCCCCEEEEecC-------CccHHHHHHHHHHhCc-ccE-E
Confidence 4455555543 356665675 24567899999999999999998533 2333567888888886 444 5
Q ss_pred EeCCCCCHHHHHHHHhcCCCcCeeeecHHHHhCCCchHHHHh
Q 009196 379 GNGDIYSYLDWNKHKSDCPELASCMIARGALIKPWIFTEIKE 420 (540)
Q Consensus 379 gNGdI~s~eDa~~~l~~~~gaDgVMIGRgaL~nPwif~eik~ 420 (540)
+.|-+.+.+++..++. .|||+|.++ + .++.+....+.
T Consensus 81 gagtvl~~d~~~~A~~--aGAd~v~~p-~--~d~~v~~~~~~ 117 (225)
T 1mxs_A 81 GAGTVLDRSMFAAVEA--AGAQFVVTP-G--ITEDILEAGVD 117 (225)
T ss_dssp EEECCCSHHHHHHHHH--HTCSSEECS-S--CCHHHHHHHHH
T ss_pred eeCeEeeHHHHHHHHH--CCCCEEEeC-C--CCHHHHHHHHH
Confidence 6677999999999887 699999987 2 45555444443
No 486
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=86.62 E-value=5.8 Score=39.51 Aligned_cols=88 Identities=7% Similarity=-0.004 Sum_probs=58.3
Q ss_pred ccccEEEEecCCCCCChhHHHHHHHHHHHcCCc---EEEEecccccC----ccCCC--cCHHHHHHHHHHcCCCceEEE-
Q 009196 310 VDKPITIKVRTGYFEGKNRIDSLIADIGTWGAS---AVTVHGRTRQQ----RYSKL--ADWDYIYQCARKASDDLQVLG- 379 (540)
Q Consensus 310 v~iPVtVKiR~G~~e~~~~~~~la~~leeaGvd---aItVHgRtr~q----~y~g~--adw~~I~~i~~~~~~~IPVIg- 379 (540)
.+.||.+=+.. ...++..+.++++.++|+| +|.||--+... .|.+. .-++.++.+++.+ ++||+.
T Consensus 92 ~~~p~~~~i~g---~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK 166 (314)
T 2e6f_A 92 SKKPLFLSISG---LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVK 166 (314)
T ss_dssp TTCCEEEEECC---SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEE
T ss_pred CCCcEEEEeCC---CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEE
Confidence 47899887763 2457888999999999999 99998632111 11111 1256788888887 688874
Q ss_pred -eCCCCCHHHH---HHHHhcCCC-cCeeee
Q 009196 380 -NGDIYSYLDW---NKHKSDCPE-LASCMI 404 (540)
Q Consensus 380 -NGdI~s~eDa---~~~l~~~~g-aDgVMI 404 (540)
.+++ +.+++ .+.+.+ .| +|+|.+
T Consensus 167 ~~~~~-~~~~~~~~a~~~~~-aG~~d~i~v 194 (314)
T 2e6f_A 167 MPPYF-DIAHFDTAAAVLNE-FPLVKFVTC 194 (314)
T ss_dssp ECCCC-CHHHHHHHHHHHHT-CTTEEEEEE
T ss_pred ECCCC-CHHHHHHHHHHHHh-cCCceEEEE
Confidence 4555 55663 333455 78 999864
No 487
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=86.21 E-value=3 Score=43.89 Aligned_cols=117 Identities=6% Similarity=-0.020 Sum_probs=82.0
Q ss_pred CCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc--cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEE
Q 009196 267 CTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV--DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAV 344 (540)
Q Consensus 267 aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v--~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaI 344 (540)
.||..+-+..|- ....|.. +++.-.+.|+++++++ ++.+.|-.--+| +..++.++++.|++.++.+|
T Consensus 185 ~G~~~~KiK~g~------g~~~G~~---~~~~d~~~v~avrea~G~~~~L~vDaN~~~--~~~~Ai~~~~~l~~~~i~~i 253 (415)
T 2p3z_A 185 MGFIGGKMPTHW------GPHDGDA---GIRKDAAMVADMREKCGPDFWLMLDCWMSQ--DVNYATKLAHACAPFNLKWI 253 (415)
T ss_dssp HTCSEEEEECCC------CGGGHHH---HHHHHHHHHHHHHHHHCSSSEEEEECTTCC--CHHHHHHHHHHHGGGTCCEE
T ss_pred hCcceEEEeccc------Ccccccc---cHHHHHHHHHHHHHHhCCCCEEEEECCCCC--CHHHHHHHHHHHhhcCCceE
Confidence 488888875430 0001211 3344566777777776 456666666666 45788999999999888776
Q ss_pred EEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 345 TVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 345 tVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
+|.. .+.||+..+++++.++..+||.+.=.+.+..++.++++. . +|.|.+
T Consensus 254 -------EqPl-~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~-~-~d~i~i 303 (415)
T 2p3z_A 254 -------EECL-PPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAET-G-IDIMQP 303 (415)
T ss_dssp -------ECCS-CTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHT-T-CSEECC
T ss_pred -------eCCC-CcchHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHc-C-CCEEEe
Confidence 3443 345899999999988312898888888999999998885 5 999876
No 488
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=86.08 E-value=8.6 Score=36.42 Aligned_cols=134 Identities=13% Similarity=0.062 Sum_probs=71.0
Q ss_pred eEEEEecCCcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccE-EEEecCC
Q 009196 243 LFGVQICGAYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPI-TIKVRTG 321 (540)
Q Consensus 243 p~~vQL~G~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPV-tVKiR~G 321 (540)
+++++.+......+.++.+.+. ++|||+|||....|...... ....+.+.++++. .++.+ ++=.-..
T Consensus 8 ~lg~~~~~~~~~~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~-------~~~~~~~~~~~~~----~gl~~~~~~~~~~ 75 (272)
T 2q02_A 8 RFCINRKIAPGLSIEAFFRLVK-RLEFNKVELRNDMPSGSVTD-------DLNYNQVRNLAEK----YGLEIVTINAVYP 75 (272)
T ss_dssp GEEEEGGGCTTSCHHHHHHHHH-HTTCCEEEEETTSTTSSTTT-------TCCHHHHHHHHHH----TTCEEEEEEEETT
T ss_pred hhhhcccccCCCCHHHHHHHHH-HcCCCEEEeecccccccccc-------ccCHHHHHHHHHH----cCCeEEechhhhc
Confidence 3666666533334566666666 68999999987555311100 0234444444433 35544 3322222
Q ss_pred CCCC----hhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHH-----HHH---HHHcCCCceEEE-e-----CCC
Q 009196 322 YFEG----KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYI-----YQC---ARKASDDLQVLG-N-----GDI 383 (540)
Q Consensus 322 ~~e~----~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I-----~~i---~~~~~~~IPVIg-N-----GdI 383 (540)
+... ...+...+..+.+.|+..|.+|+.... ...|+.+ .++ ++.. .+.|.. | .-+
T Consensus 76 ~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~-----~~~~~~~~~~~l~~l~~~a~~~--gv~l~~E~~~~~~~~~ 148 (272)
T 2q02_A 76 FNQLTEEVVKKTEGLLRDAQGVGARALVLCPLNDG-----TIVPPEVTVEAIKRLSDLFARY--DIQGLVEPLGFRVSSL 148 (272)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHTCSEEEECCCCSS-----BCCCHHHHHHHHHHHHHHHHTT--TCEEEECCCCSTTCSC
T ss_pred cCCcHHHHHHHHHHHHHHHHHhCCCEEEEccCCCc-----hhHHHHHHHHHHHHHHHHHHHc--CCEEEEEecCCCcccc
Confidence 2211 134556667778899999999865321 1223222 333 3333 355543 1 245
Q ss_pred CCHHHHHHHHhc
Q 009196 384 YSYLDWNKHKSD 395 (540)
Q Consensus 384 ~s~eDa~~~l~~ 395 (540)
.+.+++.++++.
T Consensus 149 ~~~~~~~~l~~~ 160 (272)
T 2q02_A 149 RSAVWAQQLIRE 160 (272)
T ss_dssp CCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 688888887765
No 489
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=85.93 E-value=2.4 Score=41.72 Aligned_cols=86 Identities=10% Similarity=-0.001 Sum_probs=53.3
Q ss_pred CCCCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-----------------CHHHHHHHHHH-cCCCceEEEeC
Q 009196 320 TGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-----------------DWDYIYQCARK-ASDDLQVLGNG 381 (540)
Q Consensus 320 ~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-----------------dw~~I~~i~~~-~~~~IPVIgNG 381 (540)
.|. .+.+...++++.|+++|+|+|.|-.=.......|+. -.+.++++++. + ++||++.+
T Consensus 25 ~gd-p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~--~~Pv~lm~ 101 (268)
T 1qop_A 25 LGD-PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP--TIPIGLLM 101 (268)
T ss_dssp TTS-SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS--SSCEEEEE
T ss_pred CCC-CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC--CCCEEEEE
Confidence 443 345678899999999999999994311111111111 13568888888 5 69998864
Q ss_pred CCC-----CHHHHHHHHhcCCCcCeeeecHHHH
Q 009196 382 DIY-----SYLDWNKHKSDCPELASCMIARGAL 409 (540)
Q Consensus 382 dI~-----s~eDa~~~l~~~~gaDgVMIGRgaL 409 (540)
... ..+...+.+.+ .|+|+|.+.-..+
T Consensus 102 y~n~v~~~g~~~~~~~~~~-aGadgii~~d~~~ 133 (268)
T 1qop_A 102 YANLVFNNGIDAFYARCEQ-VGVDSVLVADVPV 133 (268)
T ss_dssp CHHHHHTTCHHHHHHHHHH-HTCCEEEETTCCG
T ss_pred cccHHHHhhHHHHHHHHHH-cCCCEEEEcCCCH
Confidence 332 12344444444 7999999864443
No 490
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=85.84 E-value=0.61 Score=47.34 Aligned_cols=85 Identities=9% Similarity=-0.049 Sum_probs=59.0
Q ss_pred hhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHH---hcCCCcCe
Q 009196 326 KNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHK---SDCPELAS 401 (540)
Q Consensus 326 ~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l---~~~~gaDg 401 (540)
.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+++.+.+++|||+.=+- +.+++.++. ++ .|||+
T Consensus 32 ~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~-~t~~ai~la~~A~~-~Gada 109 (316)
T 3e96_A 32 WHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGY-ATSTAIELGNAAKA-AGADA 109 (316)
T ss_dssp HHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHHH-HTCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCc-CHHHHHHHHHHHHh-cCCCE
Confidence 4677888999999999999999887664432222 235566677776667998855333 666665533 23 69999
Q ss_pred eeecHHHHhCC
Q 009196 402 CMIARGALIKP 412 (540)
Q Consensus 402 VMIGRgaL~nP 412 (540)
||+.-+.+..|
T Consensus 110 vlv~~P~y~~~ 120 (316)
T 3e96_A 110 VMIHMPIHPYV 120 (316)
T ss_dssp EEECCCCCSCC
T ss_pred EEEcCCCCCCC
Confidence 99987766555
No 491
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=85.51 E-value=7.9 Score=38.35 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=0.0
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRIDS 331 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~~ 331 (540)
+.+.|.+-++.+. ++|+|+|=+-+=-|-..+ |.+.+.+++++.. +.|+|+ -|. .|...+..+
T Consensus 71 E~~~M~~Di~~~~-~~GadGvV~G~Lt~dg~i-----------D~~~~~~Li~~a~---~~~vTF-HRA--fD~~~d~~~ 132 (256)
T 1twd_A 71 EFAAILEDVRTVR-ELGFPGLVTGVLDVDGNV-----------DMPRMEKIMAAAG---PLAVTF-HRA--FDMCANPLY 132 (256)
T ss_dssp HHHHHHHHHHHHH-HTTCSEEEECCBCTTSSB-----------CHHHHHHHHHHHT---TSEEEE-CGG--GGGCSCHHH
T ss_pred HHHHHHHHHHHHH-HcCCCEEEEeeECCCCCc-----------CHHHHHHHHHHhC---CCcEEE-ECc--hhccCCHHH
Q ss_pred HHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCCCCHHHHHHHHhcCCCcCee
Q 009196 332 LIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 332 la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgV 402 (540)
-.+.|.+.|++.|--|| +.-+-....+.++++.+... +|-|+..||| +.+.+.+++ . +|++.+
T Consensus 133 ale~L~~lG~~rILTSG----~~~~a~~g~~~L~~Lv~~a~-~i~Im~GgGv-~~~Ni~~l~-~-tGv~e~ 195 (256)
T 1twd_A 133 TLNNLAELGIARVLTSG----QKSDALQGLSKIMELIAHRD-APIIMAGAGV-RAENLHHFL-D-AGVLEV 195 (256)
T ss_dssp HHHHHHHHTCCEEEECT----TSSSTTTTHHHHHHHHTSSS-CCEEEEESSC-CTTTHHHHH-H-HTCSEE
T ss_pred HHHHHHHcCCCEEECCC----CCCCHHHHHHHHHHHHHhhC-CcEEEecCCc-CHHHHHHHH-H-cCCCeE
No 492
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=85.35 E-value=3.6 Score=43.00 Aligned_cols=95 Identities=8% Similarity=0.019 Sum_probs=70.6
Q ss_pred HHHHHHHhccccc--ccEEEEecCC------CCCChhHHHHHHHHHHHc--CCc-EEEEecccccCccC---CCcCHHHH
Q 009196 299 MKGIIEATSGTVD--KPITIKVRTG------YFEGKNRIDSLIADIGTW--GAS-AVTVHGRTRQQRYS---KLADWDYI 364 (540)
Q Consensus 299 l~eIv~av~~~v~--iPVtVKiR~G------~~e~~~~~~~la~~leea--Gvd-aItVHgRtr~q~y~---g~adw~~I 364 (540)
..+.|++|+++++ +.+.|-.--+ | +..++.++++.|++. ++. +| +|... .+.||+..
T Consensus 218 d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~--~~~~a~~~~~~L~~~~~~i~~~i-------EqP~~~~~~~~d~~~~ 288 (413)
T 1kcz_A 218 LRDRIIKLRVREDYAPIFHIDVYGTIGAAFDV--DIKAMADYIQTLAEAAKPFHLRI-------EGPMDVEDRQKQMEAM 288 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTT--CHHHHHHHHHHHHHHHTTSCEEE-------ECSBCCSSHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEecCCCcccccCC--CHHHHHHHHHHHHhhcCCcceEE-------ecCCCCCCCcccHHHH
Confidence 5578899998874 4555554444 5 457889999999987 555 33 33332 23478888
Q ss_pred HHHHHH-----cCCCceEEEeCCCCCHHHHHHHHhcCCCcCeeeec
Q 009196 365 YQCARK-----ASDDLQVLGNGDIYSYLDWNKHKSDCPELASCMIA 405 (540)
Q Consensus 365 ~~i~~~-----~~~~IPVIgNGdI~s~eDa~~~l~~~~gaDgVMIG 405 (540)
+++++. . ++||.+.=-+++.+++.++++. ..+|.|++=
T Consensus 289 ~~l~~~l~~~g~--~ipIa~dE~~~~~~~~~~~i~~-~a~d~v~ik 331 (413)
T 1kcz_A 289 RDLRAELDGRGV--DAELVADEWCNTVEDVKFFTDN-KAGHMVQIK 331 (413)
T ss_dssp HHHHHHHHHHTC--CEEEEECTTCCSHHHHHHHHHT-TCSSEEEEC
T ss_pred HHHHHhhhcCCC--CCcEEeCCCcCCHHHHHHHHHh-CCCCEEEeC
Confidence 999988 6 6999998889999999998886 778988864
No 493
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.28 E-value=4 Score=47.76 Aligned_cols=97 Identities=8% Similarity=0.055 Sum_probs=66.5
Q ss_pred HHHhcccc-cccEEEEecCCCCCChhHHHHHHHHHHHcCCcEEEEecccccC----ccCC------CcCHHHHHHHHHHc
Q 009196 303 IEATSGTV-DKPITIKVRTGYFEGKNRIDSLIADIGTWGASAVTVHGRTRQQ----RYSK------LADWDYIYQCARKA 371 (540)
Q Consensus 303 v~av~~~v-~iPVtVKiR~G~~e~~~~~~~la~~leeaGvdaItVHgRtr~q----~y~g------~adw~~I~~i~~~~ 371 (540)
++.+++.. +.|+.+=+-.|. +.+++.+++++++++|+|+|.||.-.... .+.. ..-++.++.+++.+
T Consensus 625 i~~~~~~~~~~~~i~~i~~g~--~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~ 702 (1025)
T 1gte_A 625 VTELKADFPDNIVIASIMCSY--NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV 702 (1025)
T ss_dssp HHHHHHHCTTSEEEEEECCCS--CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCeEEEecCCC--CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh
Confidence 34445444 578877554443 45788899999999999999998653221 1111 11256788888887
Q ss_pred CCCceEE--EeCCCCCHHHHHHHHhcCCCcCeeee
Q 009196 372 SDDLQVL--GNGDIYSYLDWNKHKSDCPELASCMI 404 (540)
Q Consensus 372 ~~~IPVI--gNGdI~s~eDa~~~l~~~~gaDgVMI 404 (540)
++||+ ...++.+..++.+.+.+ .|+|+|.+
T Consensus 703 --~~Pv~vK~~~~~~~~~~~a~~~~~-~G~d~i~v 734 (1025)
T 1gte_A 703 --QIPFFAKLTPNVTDIVSIARAAKE-GGADGVTA 734 (1025)
T ss_dssp --SSCEEEEECSCSSCHHHHHHHHHH-HTCSEEEE
T ss_pred --CCceEEEeCCChHHHHHHHHHHHH-cCCCEEEE
Confidence 68888 56777777776666766 89999988
No 494
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=85.26 E-value=3.3 Score=43.72 Aligned_cols=71 Identities=11% Similarity=0.210 Sum_probs=54.7
Q ss_pred ChhHHHHHHHHHHH-cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeC-CCCCHHHHHHHHhcCCCcCee
Q 009196 325 GKNRIDSLIADIGT-WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNG-DIYSYLDWNKHKSDCPELASC 402 (540)
Q Consensus 325 ~~~~~~~la~~lee-aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNG-dI~s~eDa~~~l~~~~gaDgV 402 (540)
+..++.++++.|.+ .++.+| +|.. .+.||+-.+++++.++.++||++.= -++++.++.++++. ..+|.|
T Consensus 268 t~~~ai~~~~~L~~~~~i~~i-------EePl-~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~-~a~d~i 338 (431)
T 2fym_A 268 TSEEFTHFLEELTKQYPIVSI-------EDGL-DESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEK-GIANSI 338 (431)
T ss_dssp CHHHHHHHHHHHHHHSCEEEE-------ESCS-CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHT-TCCSEE
T ss_pred CHHHHHHHHHHHHHhCCceEE-------ECCC-CcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHh-CCCCEE
Confidence 35678899999987 775544 4444 3468999999998874358988766 68999999999986 778998
Q ss_pred ee
Q 009196 403 MI 404 (540)
Q Consensus 403 MI 404 (540)
++
T Consensus 339 ~i 340 (431)
T 2fym_A 339 LI 340 (431)
T ss_dssp EE
T ss_pred EE
Confidence 87
No 495
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=85.20 E-value=1.4 Score=44.30 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCcc-ccccCCchHHHHHHHHhcccccccEEEEecCCCCCChhHHH
Q 009196 252 YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAG-SCLLTKPMRMKGIIEATSGTVDKPITIKVRTGYFEGKNRID 330 (540)
Q Consensus 252 ~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~G-saLl~~p~~l~eIv~av~~~v~iPVtVKiR~G~~e~~~~~~ 330 (540)
+++...+.|+... +.|+|.||||+-.--+ |+- -......+++..+++++++.+++||+|-..- .
T Consensus 36 ~~~~a~~~a~~~v-~~GAdiIDIGgestrP-----ga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~---------~ 100 (282)
T 1aj0_A 36 SLIDAVKHANLMI-NAGATIIDVGGESTRP-----GAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSK---------P 100 (282)
T ss_dssp HHHHHHHHHHHHH-HHTCSEEEEESSCCST-----TCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCC---------H
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCcCCC-----CCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCC---------H
Confidence 4666666666655 4699999999632111 110 0123456678888888888779999996542 1
Q ss_pred HHHHHHHHcCCcEE
Q 009196 331 SLIADIGTWGASAV 344 (540)
Q Consensus 331 ~la~~leeaGvdaI 344 (540)
+.++...++|++.|
T Consensus 101 ~va~aAl~aGa~iI 114 (282)
T 1aj0_A 101 EVIRESAKVGAHII 114 (282)
T ss_dssp HHHHHHHHTTCCEE
T ss_pred HHHHHHHHcCCCEE
Confidence 33444444565555
No 496
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.01 E-value=0.37 Score=48.65 Aligned_cols=87 Identities=15% Similarity=0.057 Sum_probs=60.5
Q ss_pred ChhHHHHHHHHHHHcCCcEEEEecccccCccCCCc-CHHHHHHHHHHcCCCceEE-EeCCCCCHHHHHHH---HhcCCCc
Q 009196 325 GKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLA-DWDYIYQCARKASDDLQVL-GNGDIYSYLDWNKH---KSDCPEL 399 (540)
Q Consensus 325 ~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~a-dw~~I~~i~~~~~~~IPVI-gNGdI~s~eDa~~~---l~~~~ga 399 (540)
+.+....+++.+.+.|++.|.+-|-|.+..+-... ..+.++.+.+.+.+++||| |.|... .+++.++ .++ .||
T Consensus 23 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~-t~~ai~la~~a~~-~Ga 100 (300)
T 3eb2_A 23 RADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTS-VADAVAQAKLYEK-LGA 100 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESS-HHHHHHHHHHHHH-HTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC-HHHHHHHHHHHHH-cCC
Confidence 34577888999999999999998887665432222 2355666677666678988 555554 4444432 234 699
Q ss_pred CeeeecHHHHhCCC
Q 009196 400 ASCMIARGALIKPW 413 (540)
Q Consensus 400 DgVMIGRgaL~nPw 413 (540)
|+||+.-..+..|.
T Consensus 101 davlv~~P~y~~~~ 114 (300)
T 3eb2_A 101 DGILAILEAYFPLK 114 (300)
T ss_dssp SEEEEEECCSSCCC
T ss_pred CEEEEcCCCCCCCC
Confidence 99999998888874
No 497
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=84.99 E-value=3.9 Score=39.76 Aligned_cols=143 Identities=8% Similarity=-0.028 Sum_probs=86.4
Q ss_pred eEEEEecC-CcHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhcccc-cccEEEEecC
Q 009196 243 LFGVQICG-AYPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGTV-DKPITIKVRT 320 (540)
Q Consensus 243 p~~vQL~G-~~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~v-~iPVtVKiR~ 320 (540)
.+.+-|.| .+.+++...++.+. ..|+|.||+-.-+= .. .+.+.+.++++.+++.. ++|+.+=+|.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~-~~~~D~vElRvD~l---------~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~ 71 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHR-IDAIDVLELRIDQF---------EN---VTVDQVAEMITKLKVMQDSFKLLVTYRT 71 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHT-TTTCSEEEEECTTS---------TT---CCHHHHHHHHHHHC---CCSEEEEECCB
T ss_pred eEEEEecCCCCHHHHHHHHHHhh-hcCCCEEEEEeccc---------cc---CCHHHHHHHHHHHHHhccCCCEEEEeec
Confidence 57888999 99998888777776 56999999965321 00 13577888899999887 7899988897
Q ss_pred CCC-----CChhHHHHHHHHHHHc-CCcEEEEecccccCccCCCcCHHHHHHHHHHc-CCCceEEEeC-CC---CCHHHH
Q 009196 321 GYF-----EGKNRIDSLIADIGTW-GASAVTVHGRTRQQRYSKLADWDYIYQCARKA-SDDLQVLGNG-DI---YSYLDW 389 (540)
Q Consensus 321 G~~-----e~~~~~~~la~~leea-GvdaItVHgRtr~q~y~g~adw~~I~~i~~~~-~~~IPVIgNG-dI---~s~eDa 389 (540)
-+. .+.+...++.+.+.+. ++++|.|--... .+-+.+.++.+.. ..++.||++= |. -+.+++
T Consensus 72 ~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-------~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el 144 (238)
T 1sfl_A 72 KLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQAD-------IDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDEL 144 (238)
T ss_dssp GGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTT-------SCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCC-------CChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHH
Confidence 442 2445677888887776 699999953210 0112333332221 1146777663 22 234555
Q ss_pred HHHHhc--CCCcCeeeec
Q 009196 390 NKHKSD--CPELASCMIA 405 (540)
Q Consensus 390 ~~~l~~--~~gaDgVMIG 405 (540)
...+.+ ..|||.|=|+
T Consensus 145 ~~~~~~~~~~gaDivKia 162 (238)
T 1sfl_A 145 QFIFFKMQKFNPEYVKLA 162 (238)
T ss_dssp HHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 544432 2788887665
No 498
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=84.87 E-value=4.2 Score=43.10 Aligned_cols=71 Identities=10% Similarity=0.153 Sum_probs=54.1
Q ss_pred hhHHHHHHHHHHH-cCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCC-CCCHHHHHHHHhcCCCcCeee
Q 009196 326 KNRIDSLIADIGT-WGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGD-IYSYLDWNKHKSDCPELASCM 403 (540)
Q Consensus 326 ~~~~~~la~~lee-aGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGd-I~s~eDa~~~l~~~~gaDgVM 403 (540)
..++.++++.|.+ .++.+| +|.. .+.||+..+++++.++.++||++.=- ++++.++.++++. ..+|.|+
T Consensus 281 ~~eai~~~~~l~~~~~i~~i-------EePl-~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~-~a~d~i~ 351 (444)
T 1w6t_A 281 SAEQIDYLEELVNKYPIITI-------EDGM-DENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQE-GAANSIL 351 (444)
T ss_dssp HHHHHHHHHHHHHHSCEEEE-------ESCS-CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHH-TCCSEEE
T ss_pred HHHHHHHHHHHHHhCCcEEE-------ECCC-ChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHc-CCCCEEE
Confidence 4678889988864 775544 4444 34689999999988743599987666 8999999999986 7789888
Q ss_pred ec
Q 009196 404 IA 405 (540)
Q Consensus 404 IG 405 (540)
+=
T Consensus 352 ik 353 (444)
T 1w6t_A 352 IK 353 (444)
T ss_dssp EC
T ss_pred Ec
Confidence 63
No 499
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=84.82 E-value=5.8 Score=42.23 Aligned_cols=157 Identities=10% Similarity=-0.050 Sum_probs=90.1
Q ss_pred CeEEEEecCC--cHHHHHHHHHHHHHhCCCCEEEecCCCCCcccccCCccccccCCchHHHHHHHHhccc---ccccEEE
Q 009196 242 DLFGVQICGA--YPDTLARTVELIDQQCTVDFIDINMGCPIDIVVNKGAGSCLLTKPMRMKGIIEATSGT---VDKPITI 316 (540)
Q Consensus 242 ~p~~vQL~G~--~p~~~a~AA~~~~~~aG~D~IDIN~GCP~~~v~~~G~GsaLl~~p~~l~eIv~av~~~---v~iPVtV 316 (540)
.|+++=+=.. ++....+.++.+. ++|+.+|.|-=..+.++.+..-.|..|. ..+...+-|++++.+ .+.|+.|
T Consensus 153 ~PviaD~dtGfG~~~~v~~~vk~~~-~aGaaGi~iEDq~~~~KkCGH~~gk~lv-~~~e~v~rI~Aar~A~~~~g~d~~I 230 (439)
T 3i4e_A 153 APIVADAEAGFGGVLNAFELMKAMI-EAGASGVHFEDQLASVKKCGHMGGKVLV-PTREAVAKLTAARLAADVMGTPTVL 230 (439)
T ss_dssp CCEEEECTTTTSSHHHHHHHHHHHH-HHTCSEEEEESBCGGGCBCSTTCBCCBC-CHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCeEEECCCCCCccHHHHHHHHHHH-HcCCEEEEEeCCCCCccccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 6787766532 3446778888877 7899999997554333333333344444 444444444455443 2566666
Q ss_pred EecCCC------------------------------CCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHH
Q 009196 317 KVRTGY------------------------------FEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQ 366 (540)
Q Consensus 317 KiR~G~------------------------------~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~ 366 (540)
=-|+-. ....+++++=+....+ |+|.|-+++. ..+.+.+.+
T Consensus 231 iARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~--------~~~~eei~~ 301 (439)
T 3i4e_A 231 VARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETG--------KPDLEYAKK 301 (439)
T ss_dssp EEEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCS--------SCCHHHHHH
T ss_pred EEEcCcccccccccccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCC--------CCCHHHHHH
Confidence 566532 1234567777777777 9999999753 345666666
Q ss_pred HHHHcC--CCce-EEEeCC-CCC------HHHHH---HHHhcCCCcCeeeecHHHHh
Q 009196 367 CARKAS--DDLQ-VLGNGD-IYS------YLDWN---KHKSDCPELASCMIARGALI 410 (540)
Q Consensus 367 i~~~~~--~~IP-VIgNGd-I~s------~eDa~---~~l~~~~gaDgVMIGRgaL~ 410 (540)
+.+.+. .+++ +.+|.- .++ .+++. +-|.+ -|+..|.++-+++.
T Consensus 302 f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~-lGv~~v~~~la~~r 357 (439)
T 3i4e_A 302 FAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGA-MGYKFQFITLAGFH 357 (439)
T ss_dssp HHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHH-HTCCEEEETTHHHH
T ss_pred HHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHH-cCCeEEEeChHHHH
Confidence 655431 0233 334432 344 22221 22444 68899998866653
No 500
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=84.72 E-value=8.1 Score=40.08 Aligned_cols=121 Identities=17% Similarity=0.068 Sum_probs=84.4
Q ss_pred cccEEEEecCC-CCCChhHHHHHHHHHHHcCCcEEEEecccccCccCCCcCHHHHHHHHHHcCCCceEEEeCCC-CCHHH
Q 009196 311 DKPITIKVRTG-YFEGKNRIDSLIADIGTWGASAVTVHGRTRQQRYSKLADWDYIYQCARKASDDLQVLGNGDI-YSYLD 388 (540)
Q Consensus 311 ~iPVtVKiR~G-~~e~~~~~~~la~~leeaGvdaItVHgRtr~q~y~g~adw~~I~~i~~~~~~~IPVIgNGdI-~s~eD 388 (540)
+-||.|=-=+. ...+.+.+.+-+.+|.++|++.|-+.--+ ..+.+.+..|++.+ ++|++ +|| +++.-
T Consensus 29 ~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~-------~~~a~al~~I~~~~--~vPlv--aDiHf~~~l 97 (366)
T 3noy_A 29 DAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPH-------KEDVEALEEIVKKS--PMPVI--ADIHFAPSY 97 (366)
T ss_dssp TSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCS-------HHHHHHHHHHHHHC--SSCEE--EECCSCHHH
T ss_pred CCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCC-------hHHHHHHHHHHhcC--CCCEE--EeCCCCHHH
Confidence 34666542221 11244567777788999999999884321 12357889999988 69998 688 89999
Q ss_pred HHHHHhcCCCcCeeeecHHHHhCCCchHHHHhc-----C------------------CCCCCHHHHHHHHHHHHHHHHH
Q 009196 389 WNKHKSDCPELASCMIARGALIKPWIFTEIKEQ-----R------------------HWDITSGERLNIMKDFARFGLE 444 (540)
Q Consensus 389 a~~~l~~~~gaDgVMIGRgaL~nPwif~eik~~-----~------------------~~~~s~~erl~il~~~~~~~le 444 (540)
+.++++ .|+|.+=|==|-+.++|-|.++-+. . +..+++....+-+.+|++.+.+
T Consensus 98 al~a~e--~G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~ 174 (366)
T 3noy_A 98 AFLSME--KGVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEK 174 (366)
T ss_dssp HHHHHH--TTCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--hCCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Confidence 999887 6999999999999998877777321 0 1135566666777777775443
Done!