Query 009198
Match_columns 540
No_of_seqs 286 out of 2761
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 21:02:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 1.4E-37 4.8E-42 317.8 40.4 416 58-519 1-424 (425)
2 1s3e_A Amine oxidase [flavin-c 100.0 7E-38 2.4E-42 327.8 32.4 432 56-525 3-457 (520)
3 2vvm_A Monoamine oxidase N; FA 100.0 2.7E-37 9.3E-42 321.7 25.0 431 57-529 39-492 (495)
4 2yg5_A Putrescine oxidase; oxi 100.0 4.9E-36 1.7E-40 308.9 30.2 426 56-522 4-451 (453)
5 3nrn_A Uncharacterized protein 100.0 9.3E-35 3.2E-39 296.2 38.1 401 58-518 1-403 (421)
6 4dgk_A Phytoene dehydrogenase; 100.0 2E-35 7E-40 308.2 33.0 432 57-525 1-494 (501)
7 3i6d_A Protoporphyrinogen oxid 100.0 3E-36 1E-40 312.2 25.1 422 57-522 5-468 (470)
8 2ivd_A PPO, PPOX, protoporphyr 100.0 1.6E-35 5.6E-40 307.1 29.5 420 54-524 13-475 (478)
9 3nks_A Protoporphyrinogen oxid 100.0 5.1E-35 1.8E-39 303.3 29.1 419 57-521 2-473 (477)
10 3lov_A Protoporphyrinogen oxid 100.0 6E-35 2.1E-39 302.5 24.1 425 57-525 4-468 (475)
11 1sez_A Protoporphyrinogen oxid 100.0 2.7E-35 9.1E-40 307.5 19.0 430 56-527 12-498 (504)
12 4gde_A UDP-galactopyranose mut 100.0 6.4E-34 2.2E-38 297.9 20.7 422 54-521 7-478 (513)
13 3k7m_X 6-hydroxy-L-nicotine ox 100.0 3.5E-30 1.2E-34 263.4 37.4 412 58-521 2-425 (431)
14 1b37_A Protein (polyamine oxid 100.0 5.9E-32 2E-36 279.4 24.5 426 56-524 3-460 (472)
15 2iid_A L-amino-acid oxidase; f 100.0 5E-31 1.7E-35 274.6 31.2 429 55-524 31-486 (498)
16 1rsg_A FMS1 protein; FAD bindi 100.0 6.6E-32 2.2E-36 282.0 23.4 426 56-524 7-509 (516)
17 2jae_A L-amino acid oxidase; o 100.0 2.6E-31 8.9E-36 276.1 27.5 431 55-524 9-487 (489)
18 4dsg_A UDP-galactopyranose mut 100.0 9.7E-31 3.3E-35 269.7 22.4 416 55-519 7-452 (484)
19 4gut_A Lysine-specific histone 100.0 3E-30 1E-34 277.1 25.0 418 55-520 334-775 (776)
20 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 4.4E-28 1.5E-32 239.8 27.6 223 281-522 111-342 (342)
21 3ayj_A Pro-enzyme of L-phenyla 100.0 5.8E-29 2E-33 261.1 19.9 253 270-526 336-683 (721)
22 2xag_A Lysine-specific histone 100.0 3.6E-27 1.2E-31 254.7 34.0 243 274-535 565-842 (852)
23 2z3y_A Lysine-specific histone 100.0 4.3E-27 1.5E-31 251.4 33.0 231 275-524 395-660 (662)
24 2b9w_A Putative aminooxidase; 99.9 2.7E-26 9.2E-31 234.0 21.4 409 55-519 4-423 (424)
25 1yvv_A Amine oxidase, flavin-c 99.9 5.4E-24 1.8E-28 210.0 26.8 217 287-524 111-329 (336)
26 2bcg_G Secretory pathway GDP d 99.9 7E-21 2.4E-25 194.8 30.9 388 55-519 9-438 (453)
27 1v0j_A UDP-galactopyranose mut 99.9 7.4E-23 2.5E-27 205.8 13.4 264 56-380 6-277 (399)
28 3p1w_A Rabgdi protein; GDI RAB 99.9 2.2E-20 7.5E-25 188.6 23.6 263 54-339 17-313 (475)
29 1d5t_A Guanine nucleotide diss 99.9 2.7E-19 9.3E-24 181.8 31.3 384 55-519 4-427 (433)
30 2bi7_A UDP-galactopyranose mut 99.9 1E-20 3.6E-25 188.9 19.4 252 57-374 3-260 (384)
31 1i8t_A UDP-galactopyranose mut 99.9 3.1E-21 1.1E-25 191.6 15.0 258 57-379 1-262 (367)
32 3hdq_A UDP-galactopyranose mut 99.8 8.8E-20 3E-24 180.9 16.4 357 54-521 26-390 (397)
33 3dje_A Fructosyl amine: oxygen 99.7 9.8E-17 3.4E-21 163.9 18.5 64 281-346 160-226 (438)
34 1vg0_A RAB proteins geranylger 99.7 2E-14 7E-19 149.2 33.8 254 121-417 239-507 (650)
35 2gag_B Heterotetrameric sarcos 99.7 3.5E-16 1.2E-20 158.0 18.6 202 281-521 173-375 (405)
36 3kkj_A Amine oxidase, flavin-c 99.7 1.2E-14 4.3E-19 139.1 25.7 64 57-121 2-65 (336)
37 1y56_B Sarcosine oxidase; dehy 99.7 8.3E-15 2.9E-19 146.7 23.2 205 281-521 148-355 (382)
38 2e1m_A L-glutamate oxidase; L- 99.7 6E-16 2.1E-20 152.0 14.4 80 55-134 42-131 (376)
39 3dme_A Conserved exported prot 99.7 4.2E-15 1.4E-19 148.0 20.6 59 281-340 149-209 (369)
40 3ps9_A TRNA 5-methylaminomethy 99.7 5.8E-14 2E-18 150.9 30.0 63 281-346 416-478 (676)
41 1ryi_A Glycine oxidase; flavop 99.6 4.2E-15 1.5E-19 148.9 17.2 200 281-521 163-362 (382)
42 3nyc_A D-arginine dehydrogenas 99.6 2.5E-15 8.4E-20 150.5 15.3 57 281-340 153-209 (381)
43 3pvc_A TRNA 5-methylaminomethy 99.6 1.8E-13 6.3E-18 147.1 29.7 63 281-346 411-474 (689)
44 2gf3_A MSOX, monomeric sarcosi 99.6 3.5E-14 1.2E-18 142.5 22.0 204 281-521 149-364 (389)
45 2oln_A NIKD protein; flavoprot 99.6 6.1E-14 2.1E-18 141.1 22.7 57 281-340 152-208 (397)
46 2uzz_A N-methyl-L-tryptophan o 99.6 4.8E-14 1.6E-18 140.6 18.6 62 281-346 148-209 (372)
47 3axb_A Putative oxidoreductase 99.6 2.6E-14 9E-19 146.2 15.9 63 281-345 180-258 (448)
48 3nlc_A Uncharacterized protein 99.5 6.4E-12 2.2E-16 129.7 26.5 58 282-340 220-277 (549)
49 2rgh_A Alpha-glycerophosphate 99.5 1.6E-12 5.6E-17 136.2 21.8 62 281-344 187-253 (571)
50 3da1_A Glycerol-3-phosphate de 99.5 3.8E-13 1.3E-17 140.7 15.5 59 281-340 169-232 (561)
51 2i0z_A NAD(FAD)-utilizing dehy 99.4 6.2E-13 2.1E-17 135.6 12.7 59 281-340 133-191 (447)
52 3cgv_A Geranylgeranyl reductas 99.4 2.7E-11 9.3E-16 121.7 24.4 58 282-340 102-162 (397)
53 3oz2_A Digeranylgeranylglycero 99.4 2.2E-11 7.6E-16 122.1 23.4 58 282-340 102-162 (397)
54 3nix_A Flavoprotein/dehydrogen 99.4 1.3E-11 4.6E-16 125.0 21.2 60 281-340 105-166 (421)
55 3g3e_A D-amino-acid oxidase; F 99.4 1.5E-13 5.1E-18 135.8 6.0 189 281-524 141-336 (351)
56 1y0p_A Fumarate reductase flav 99.4 5.7E-12 2E-16 132.6 18.0 59 282-340 255-317 (571)
57 2qcu_A Aerobic glycerol-3-phos 99.4 1.1E-11 3.6E-16 128.4 19.5 58 281-340 148-210 (501)
58 3rp8_A Flavoprotein monooxygen 99.4 5.3E-12 1.8E-16 127.4 16.8 55 282-340 127-181 (407)
59 4at0_A 3-ketosteroid-delta4-5a 99.4 5.2E-12 1.8E-16 131.0 17.0 58 283-340 203-264 (510)
60 1qo8_A Flavocytochrome C3 fuma 99.4 8E-12 2.7E-16 131.2 16.7 59 282-340 250-312 (566)
61 1c0p_A D-amino acid oxidase; a 99.4 2.3E-11 8E-16 120.6 19.2 202 281-524 141-360 (363)
62 3v76_A Flavoprotein; structura 99.4 3.4E-12 1.2E-16 128.2 12.9 57 281-340 131-187 (417)
63 1pj5_A N,N-dimethylglycine oxi 99.4 2.4E-12 8.2E-17 141.5 12.6 58 281-340 150-207 (830)
64 3ihg_A RDME; flavoenzyme, anth 99.3 1.2E-10 4E-15 121.7 24.4 63 282-345 120-189 (535)
65 3i3l_A Alkylhalidase CMLS; fla 99.3 8.9E-11 3E-15 123.0 23.2 58 282-340 128-188 (591)
66 3fmw_A Oxygenase; mithramycin, 99.3 1.2E-10 4.2E-15 121.7 21.9 63 282-346 148-214 (570)
67 2qa1_A PGAE, polyketide oxygen 99.3 5E-10 1.7E-14 115.5 25.6 63 282-346 106-172 (500)
68 2gmh_A Electron transfer flavo 99.3 3.5E-10 1.2E-14 118.9 24.8 59 282-340 144-217 (584)
69 2qa2_A CABE, polyketide oxygen 99.3 1.5E-09 5.2E-14 111.9 27.6 63 282-346 107-173 (499)
70 3atr_A Conserved archaeal prot 99.2 7.9E-10 2.7E-14 112.9 21.7 58 282-340 100-162 (453)
71 1d4d_A Flavocytochrome C fumar 99.2 2.1E-10 7E-15 120.4 16.9 59 282-340 255-317 (572)
72 2gqf_A Hypothetical protein HI 99.2 1.3E-10 4.5E-15 116.2 14.1 59 281-341 108-169 (401)
73 2wdq_A Succinate dehydrogenase 99.2 3.5E-10 1.2E-14 118.7 17.8 59 282-340 143-206 (588)
74 1k0i_A P-hydroxybenzoate hydro 99.2 6.5E-10 2.2E-14 111.5 18.7 63 282-345 103-169 (394)
75 3c4n_A Uncharacterized protein 99.2 1.2E-11 4.2E-16 124.4 5.2 57 281-340 171-236 (405)
76 2dkh_A 3-hydroxybenzoate hydro 99.2 4.2E-09 1.4E-13 112.0 24.5 66 282-347 141-219 (639)
77 4hb9_A Similarities with proba 99.2 3.3E-10 1.1E-14 114.2 14.9 44 296-340 123-166 (412)
78 1chu_A Protein (L-aspartate ox 99.1 2.3E-10 8E-15 118.9 13.4 59 282-340 138-208 (540)
79 2bs2_A Quinol-fumarate reducta 99.1 5.6E-10 1.9E-14 118.2 15.8 58 282-340 158-220 (660)
80 2h88_A Succinate dehydrogenase 99.1 6.9E-10 2.4E-14 116.7 14.9 58 282-340 155-217 (621)
81 3alj_A 2-methyl-3-hydroxypyrid 99.1 1.1E-09 3.6E-14 109.3 13.9 54 282-340 107-160 (379)
82 2x3n_A Probable FAD-dependent 99.1 6.4E-10 2.2E-14 111.7 12.3 65 281-346 106-173 (399)
83 2weu_A Tryptophan 5-halogenase 99.1 3.5E-09 1.2E-13 110.0 18.2 59 281-340 172-230 (511)
84 2xdo_A TETX2 protein; tetracyc 99.1 1.2E-08 4E-13 102.4 21.5 39 56-94 25-63 (398)
85 3e1t_A Halogenase; flavoprotei 99.1 8.9E-10 3E-14 114.3 13.0 58 282-340 111-172 (512)
86 1rp0_A ARA6, thiazole biosynth 99.0 1.1E-09 3.9E-14 104.2 12.6 40 56-95 38-78 (284)
87 2aqj_A Tryptophan halogenase, 99.0 2.5E-09 8.5E-14 111.7 16.1 59 281-340 164-222 (538)
88 2vou_A 2,6-dihydroxypyridine h 99.0 4.4E-09 1.5E-13 105.4 15.8 62 56-132 4-65 (397)
89 3k30_A Histamine dehydrogenase 99.0 1.3E-09 4.3E-14 117.2 12.5 45 54-98 388-432 (690)
90 4a9w_A Monooxygenase; baeyer-v 99.0 1.9E-09 6.5E-14 106.3 12.9 56 283-340 77-132 (357)
91 4ap3_A Steroid monooxygenase; 99.0 1.4E-09 4.6E-14 113.3 12.1 42 55-96 19-60 (549)
92 3o0h_A Glutathione reductase; 99.0 4.8E-10 1.6E-14 115.5 8.2 57 282-340 232-288 (484)
93 3gwf_A Cyclohexanone monooxyge 99.0 1.6E-09 5.6E-14 112.5 12.0 58 283-340 88-147 (540)
94 1kf6_A Fumarate reductase flav 99.0 5.9E-09 2E-13 109.7 15.8 58 282-340 134-197 (602)
95 2e1m_C L-glutamate oxidase; L- 99.0 2.8E-10 9.6E-15 99.9 4.8 106 420-529 48-159 (181)
96 3jsk_A Cypbp37 protein; octame 99.0 3.5E-09 1.2E-13 101.8 12.3 40 56-95 78-119 (344)
97 2e4g_A Tryptophan halogenase; 99.0 8.5E-09 2.9E-13 107.8 16.3 59 281-340 193-252 (550)
98 3lxd_A FAD-dependent pyridine 99.0 9.5E-09 3.2E-13 103.6 16.0 58 282-340 194-251 (415)
99 2pyx_A Tryptophan halogenase; 99.0 6.5E-09 2.2E-13 108.1 14.9 59 281-340 174-233 (526)
100 2bry_A NEDD9 interacting prote 99.0 1.5E-09 5.2E-14 111.8 10.0 40 55-94 90-129 (497)
101 2zxi_A TRNA uridine 5-carboxym 99.0 3.5E-09 1.2E-13 109.7 12.6 61 282-344 123-184 (637)
102 3ces_A MNMG, tRNA uridine 5-ca 99.0 2.6E-09 9E-14 111.1 11.7 61 282-344 124-185 (651)
103 3itj_A Thioredoxin reductase 1 99.0 2.6E-09 8.9E-14 104.5 11.2 69 270-339 196-270 (338)
104 2e5v_A L-aspartate oxidase; ar 99.0 4.7E-09 1.6E-13 107.4 13.3 56 282-340 119-176 (472)
105 1mo9_A ORF3; nucleotide bindin 98.9 2.1E-08 7.1E-13 104.2 18.2 59 282-340 255-316 (523)
106 2gjc_A Thiazole biosynthetic e 98.9 4.5E-09 1.5E-13 100.5 11.8 41 56-96 64-106 (326)
107 2cul_A Glucose-inhibited divis 98.9 6.2E-09 2.1E-13 95.9 12.3 56 283-340 69-125 (232)
108 1w4x_A Phenylacetone monooxyge 98.9 7.1E-09 2.4E-13 108.2 13.9 42 55-96 14-55 (542)
109 1jnr_A Adenylylsulfate reducta 98.9 1.2E-08 4E-13 108.4 15.1 59 282-340 151-218 (643)
110 4fk1_A Putative thioredoxin re 98.9 8.5E-09 2.9E-13 99.3 12.0 36 56-91 5-40 (304)
111 1pn0_A Phenol 2-monooxygenase; 98.9 1.8E-07 6E-12 99.7 23.2 62 56-133 7-73 (665)
112 3fg2_P Putative rubredoxin red 98.9 8.4E-09 2.9E-13 103.6 12.3 58 282-340 184-241 (404)
113 3c96_A Flavin-containing monoo 98.9 1E-08 3.5E-13 103.2 13.0 37 57-93 4-41 (410)
114 3uox_A Otemo; baeyer-villiger 98.9 6.1E-09 2.1E-13 108.3 11.5 41 56-96 8-48 (545)
115 3ab1_A Ferredoxin--NADP reduct 98.9 7.8E-09 2.7E-13 102.2 11.8 41 56-96 13-53 (360)
116 2zbw_A Thioredoxin reductase; 98.9 1.2E-08 4.1E-13 99.7 11.8 41 56-96 4-44 (335)
117 3gyx_A Adenylylsulfate reducta 98.9 9.6E-09 3.3E-13 108.7 11.7 59 282-340 166-233 (662)
118 3lzw_A Ferredoxin--NADP reduct 98.8 8.8E-09 3E-13 100.4 10.3 40 57-96 7-46 (332)
119 3f8d_A Thioredoxin reductase ( 98.8 1.8E-08 6.2E-13 97.8 12.0 39 56-96 14-52 (323)
120 3r9u_A Thioredoxin reductase; 98.8 2E-08 6.9E-13 97.0 12.3 42 56-98 3-45 (315)
121 4dna_A Probable glutathione re 98.8 8E-09 2.7E-13 105.7 9.8 60 282-343 211-271 (463)
122 3oc4_A Oxidoreductase, pyridin 98.8 1.6E-08 5.4E-13 103.2 11.4 61 282-345 189-249 (452)
123 3cp8_A TRNA uridine 5-carboxym 98.8 3.4E-08 1.2E-12 102.7 13.8 56 283-340 118-174 (641)
124 3d1c_A Flavin-containing putat 98.8 2E-08 6.7E-13 99.6 11.5 55 283-340 89-143 (369)
125 3ef6_A Toluene 1,2-dioxygenase 98.8 3.3E-09 1.1E-13 106.8 5.8 57 282-340 185-241 (410)
126 2r0c_A REBC; flavin adenine di 98.8 3.6E-08 1.2E-12 103.0 12.5 61 56-132 25-85 (549)
127 1fec_A Trypanothione reductase 98.8 1.8E-08 6.1E-13 103.7 10.1 58 282-340 231-288 (490)
128 3urh_A Dihydrolipoyl dehydroge 98.7 1.4E-08 4.9E-13 104.7 8.8 42 56-97 24-65 (491)
129 2ywl_A Thioredoxin reductase r 98.7 5.6E-08 1.9E-12 85.6 11.4 53 284-340 58-110 (180)
130 2hqm_A GR, grase, glutathione 98.7 4.1E-08 1.4E-12 100.8 11.5 59 282-340 226-285 (479)
131 1ges_A Glutathione reductase; 98.7 7.9E-08 2.7E-12 97.9 13.1 57 283-340 209-265 (450)
132 3iwa_A FAD-dependent pyridine 98.7 1.8E-07 6E-12 96.0 15.3 57 282-340 202-258 (472)
133 1onf_A GR, grase, glutathione 98.7 2.1E-07 7.1E-12 96.1 15.8 58 282-340 217-275 (500)
134 1trb_A Thioredoxin reductase; 98.7 5.2E-08 1.8E-12 94.4 10.3 57 283-340 185-247 (320)
135 3s5w_A L-ornithine 5-monooxyge 98.7 2.4E-08 8E-13 102.4 8.2 39 56-94 29-72 (463)
136 3ics_A Coenzyme A-disulfide re 98.7 2.7E-07 9.4E-12 97.3 16.6 54 282-339 228-281 (588)
137 2q7v_A Thioredoxin reductase; 98.7 8.6E-08 3E-12 93.1 11.8 40 56-96 7-46 (325)
138 2gv8_A Monooxygenase; FMO, FAD 98.7 7.8E-08 2.7E-12 97.9 11.6 42 56-97 5-48 (447)
139 1y56_A Hypothetical protein PH 98.7 8.4E-08 2.9E-12 98.8 11.8 51 288-340 263-313 (493)
140 1xdi_A RV3303C-LPDA; reductase 98.7 2.2E-08 7.6E-13 103.4 7.2 61 282-344 223-283 (499)
141 2r9z_A Glutathione amide reduc 98.7 2.3E-07 8E-12 94.7 14.7 56 283-340 208-264 (463)
142 2wpf_A Trypanothione reductase 98.6 4E-08 1.4E-12 101.2 8.5 57 283-340 236-292 (495)
143 2xve_A Flavin-containing monoo 98.6 7.8E-08 2.7E-12 98.2 9.9 41 58-98 3-49 (464)
144 3fbs_A Oxidoreductase; structu 98.6 1.6E-07 5.5E-12 89.8 11.5 41 482-524 253-293 (297)
145 2q0l_A TRXR, thioredoxin reduc 98.6 2.1E-07 7E-12 89.8 12.1 38 58-96 2-40 (311)
146 3dk9_A Grase, GR, glutathione 98.6 1.5E-07 5.1E-12 96.7 11.7 59 282-340 228-293 (478)
147 3lad_A Dihydrolipoamide dehydr 98.6 4.6E-08 1.6E-12 100.5 7.8 41 56-96 2-42 (476)
148 1fl2_A Alkyl hydroperoxide red 98.6 1.2E-07 4.2E-12 91.4 10.3 53 288-340 62-115 (310)
149 1q1r_A Putidaredoxin reductase 98.6 2.1E-07 7.3E-12 94.1 11.2 59 282-340 191-250 (431)
150 1vdc_A NTR, NADPH dependent th 98.6 3.1E-07 1E-11 89.5 11.7 33 56-88 7-39 (333)
151 1hyu_A AHPF, alkyl hydroperoxi 98.6 2.7E-07 9.3E-12 95.6 11.8 53 288-340 273-326 (521)
152 2cdu_A NADPH oxidase; flavoenz 98.6 5.9E-07 2E-11 91.5 14.1 62 282-345 191-252 (452)
153 3ntd_A FAD-dependent pyridine 98.6 8.1E-07 2.8E-11 93.3 15.3 57 282-339 192-266 (565)
154 2v3a_A Rubredoxin reductase; a 98.6 2.3E-07 7.8E-12 92.4 10.6 57 282-340 187-243 (384)
155 1dxl_A Dihydrolipoamide dehydr 98.6 1.5E-07 5.2E-12 96.5 9.5 42 55-96 4-45 (470)
156 3klj_A NAD(FAD)-dependent dehy 98.5 3.6E-07 1.2E-11 90.8 11.6 43 293-339 73-115 (385)
157 2a87_A TRXR, TR, thioredoxin r 98.5 4.3E-07 1.5E-11 88.6 11.7 46 483-529 277-322 (335)
158 3h8l_A NADH oxidase; membrane 98.5 2.6E-07 8.7E-12 92.9 10.2 53 282-340 218-270 (409)
159 3qvp_A Glucose oxidase; oxidor 98.5 5E-07 1.7E-11 94.1 12.1 36 55-90 17-53 (583)
160 1v59_A Dihydrolipoamide dehydr 98.5 1.3E-07 4.5E-12 97.2 7.1 42 56-97 4-45 (478)
161 1ojt_A Surface protein; redox- 98.5 3.6E-07 1.2E-11 93.9 9.7 41 56-96 5-45 (482)
162 1m6i_A Programmed cell death p 98.5 3.7E-07 1.3E-11 93.9 9.3 57 282-340 226-282 (493)
163 3q9t_A Choline dehydrogenase a 98.4 1.3E-06 4.5E-11 90.9 13.4 37 55-91 4-41 (577)
164 1n4w_A CHOD, cholesterol oxida 98.4 7.9E-06 2.7E-10 84.2 19.0 63 282-344 221-292 (504)
165 3h28_A Sulfide-quinone reducta 98.4 9.6E-07 3.3E-11 89.3 11.7 39 57-95 2-42 (430)
166 4b1b_A TRXR, thioredoxin reduc 98.4 1.1E-06 3.9E-11 90.7 12.3 61 282-344 263-323 (542)
167 3fpz_A Thiazole biosynthetic e 98.4 9.7E-08 3.3E-12 92.8 4.1 43 55-97 63-107 (326)
168 2gqw_A Ferredoxin reductase; f 98.4 3.3E-07 1.1E-11 92.0 8.0 53 282-340 187-239 (408)
169 3t37_A Probable dehydrogenase; 98.4 3.6E-07 1.2E-11 95.1 8.4 37 55-91 15-52 (526)
170 1coy_A Cholesterol oxidase; ox 98.4 2.3E-06 7.7E-11 88.3 13.1 63 282-344 226-297 (507)
171 3fim_B ARYL-alcohol oxidase; A 98.4 6.3E-07 2.2E-11 93.1 8.4 36 57-92 2-38 (566)
172 2jbv_A Choline oxidase; alcoho 98.4 2.6E-06 8.7E-11 88.7 13.0 38 56-93 12-50 (546)
173 4eqs_A Coenzyme A disulfide re 98.4 3.2E-06 1.1E-10 85.5 13.2 54 281-340 187-240 (437)
174 4gcm_A TRXR, thioredoxin reduc 98.3 4.5E-07 1.5E-11 87.5 5.6 40 56-96 5-44 (312)
175 3vrd_B FCCB subunit, flavocyto 98.3 3.7E-07 1.3E-11 91.5 4.5 46 292-339 212-257 (401)
176 4b63_A L-ornithine N5 monooxyg 98.3 2.9E-06 9.9E-11 87.3 11.4 41 54-94 36-76 (501)
177 4g6h_A Rotenone-insensitive NA 98.3 6.8E-07 2.3E-11 91.9 6.5 57 281-339 271-331 (502)
178 1xhc_A NADH oxidase /nitrite r 98.2 3.5E-06 1.2E-10 83.1 10.5 34 57-91 8-41 (367)
179 3cgb_A Pyridine nucleotide-dis 98.2 5.9E-06 2E-10 84.7 12.5 37 57-93 36-74 (480)
180 3sx6_A Sulfide-quinone reducta 98.2 2.2E-06 7.7E-11 86.8 9.2 34 57-90 4-40 (437)
181 4a5l_A Thioredoxin reductase; 98.2 6.3E-07 2.1E-11 86.5 4.9 36 56-91 3-38 (314)
182 2bc0_A NADH oxidase; flavoprot 98.2 3.6E-06 1.2E-10 86.5 10.7 38 56-93 34-74 (490)
183 1nhp_A NADH peroxidase; oxidor 98.2 5.4E-06 1.9E-10 84.2 11.9 36 58-93 1-38 (447)
184 1ju2_A HydroxynitrIle lyase; f 98.2 1.6E-05 5.5E-10 82.5 14.7 38 55-93 24-61 (536)
185 3hyw_A Sulfide-quinone reducta 98.2 8.3E-06 2.9E-10 82.3 11.0 53 283-339 201-255 (430)
186 1o94_A Tmadh, trimethylamine d 98.1 1.6E-06 5.4E-11 93.5 6.0 44 55-98 387-430 (729)
187 2vdc_G Glutamate synthase [NAD 98.1 2.6E-06 8.9E-11 86.4 6.4 43 55-97 120-162 (456)
188 3cty_A Thioredoxin reductase; 98.1 2.2E-06 7.6E-11 82.8 5.3 41 55-96 14-54 (319)
189 2yqu_A 2-oxoglutarate dehydrog 98.0 3.3E-05 1.1E-09 78.5 12.6 50 290-341 216-265 (455)
190 2qae_A Lipoamide, dihydrolipoy 98.0 3.8E-06 1.3E-10 85.9 5.5 41 57-97 2-42 (468)
191 1ps9_A 2,4-dienoyl-COA reducta 98.0 4.4E-06 1.5E-10 89.4 6.2 43 55-97 371-413 (671)
192 3l8k_A Dihydrolipoyl dehydroge 98.0 3.2E-06 1.1E-10 86.4 4.7 41 57-97 4-44 (466)
193 1zmd_A Dihydrolipoyl dehydroge 98.0 3.8E-06 1.3E-10 86.1 4.8 42 55-96 4-45 (474)
194 1nhp_A NADH peroxidase; oxidor 98.0 3.3E-05 1.1E-09 78.4 11.2 36 56-91 148-183 (447)
195 2yqu_A 2-oxoglutarate dehydrog 98.0 5.8E-06 2E-10 84.2 5.4 41 57-97 1-41 (455)
196 3ihm_A Styrene monooxygenase A 97.9 5E-06 1.7E-10 84.0 4.6 35 56-90 21-55 (430)
197 3c4a_A Probable tryptophan hyd 97.9 6.2E-06 2.1E-10 81.9 5.2 35 58-92 1-37 (381)
198 3dgz_A Thioredoxin reductase 2 97.9 6.3E-06 2.2E-10 84.7 4.8 58 282-340 225-287 (488)
199 3qfa_A Thioredoxin reductase 1 97.9 8.4E-06 2.9E-10 84.4 5.8 36 55-90 30-65 (519)
200 1v59_A Dihydrolipoamide dehydr 97.9 6.5E-05 2.2E-09 76.9 12.3 35 57-91 183-217 (478)
201 1zk7_A HGII, reductase, mercur 97.9 9E-06 3.1E-10 83.1 5.8 57 282-341 216-272 (467)
202 3pl8_A Pyranose 2-oxidase; sub 97.9 8E-06 2.7E-10 86.1 5.2 41 56-96 45-85 (623)
203 2eq6_A Pyruvate dehydrogenase 97.9 8.4E-05 2.9E-09 75.7 12.5 35 57-91 169-203 (464)
204 3ic9_A Dihydrolipoamide dehydr 97.8 9.1E-06 3.1E-10 83.5 4.6 60 282-344 215-278 (492)
205 2bc0_A NADH oxidase; flavoprot 97.8 0.0001 3.5E-09 75.6 12.3 49 289-340 243-291 (490)
206 3dgh_A TRXR-1, thioredoxin red 97.8 1.2E-05 4.3E-10 82.4 5.4 58 282-340 227-289 (483)
207 1ebd_A E3BD, dihydrolipoamide 97.8 9.6E-06 3.3E-10 82.6 4.3 39 57-96 3-41 (455)
208 1lvl_A Dihydrolipoamide dehydr 97.8 8.7E-06 3E-10 82.9 4.0 55 282-340 212-268 (458)
209 3g5s_A Methylenetetrahydrofola 97.8 1.9E-05 6.6E-10 76.3 5.7 38 58-95 2-39 (443)
210 3cgb_A Pyridine nucleotide-dis 97.8 8.2E-05 2.8E-09 76.1 10.9 55 288-345 233-287 (480)
211 1ebd_A E3BD, dihydrolipoamide 97.8 0.00012 4.3E-09 74.3 11.8 35 57-91 170-204 (455)
212 2e1m_B L-glutamate oxidase; L- 97.8 2.4E-05 8.2E-10 63.4 5.0 105 325-445 4-110 (130)
213 2a8x_A Dihydrolipoyl dehydroge 97.8 1.4E-05 4.8E-10 81.5 4.6 56 283-340 213-271 (464)
214 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00018 6.1E-09 73.5 12.4 35 57-91 178-212 (474)
215 2eq6_A Pyruvate dehydrogenase 97.7 2.3E-05 8E-10 79.9 5.0 57 282-340 210-271 (464)
216 1lvl_A Dihydrolipoamide dehydr 97.7 0.00014 4.8E-09 73.9 10.6 36 57-92 171-206 (458)
217 1ojt_A Surface protein; redox- 97.7 0.00012 4.1E-09 75.0 10.0 54 289-344 233-290 (482)
218 2a8x_A Dihydrolipoyl dehydroge 97.7 0.0003 1E-08 71.7 12.8 36 57-92 171-206 (464)
219 2gag_A Heterotetrameric sarcos 97.7 3.1E-05 1.1E-09 86.0 5.5 41 57-97 128-168 (965)
220 1gte_A Dihydropyrimidine dehyd 97.6 3.6E-05 1.2E-09 86.1 5.8 41 56-96 186-227 (1025)
221 1cjc_A Protein (adrenodoxin re 97.6 3.2E-05 1.1E-09 78.5 4.9 42 56-97 5-48 (460)
222 2qae_A Lipoamide, dihydrolipoy 97.6 0.00035 1.2E-08 71.2 12.6 34 57-90 174-207 (468)
223 3kd9_A Coenzyme A disulfide re 97.6 3.7E-05 1.3E-09 78.0 5.2 55 282-340 190-244 (449)
224 1lqt_A FPRA; NADP+ derivative, 97.6 2.8E-05 9.5E-10 78.9 4.1 41 57-97 3-50 (456)
225 1zk7_A HGII, reductase, mercur 97.6 0.00032 1.1E-08 71.5 11.8 35 57-91 176-210 (467)
226 1xhc_A NADH oxidase /nitrite r 97.6 0.00018 6.1E-09 70.8 9.1 33 58-90 144-176 (367)
227 1kdg_A CDH, cellobiose dehydro 97.6 4.8E-05 1.7E-09 79.3 5.2 58 286-344 199-265 (546)
228 2x8g_A Thioredoxin glutathione 97.5 5.8E-05 2E-09 79.6 5.3 35 55-89 105-139 (598)
229 3lad_A Dihydrolipoamide dehydr 97.5 0.00058 2E-08 69.7 12.7 34 57-90 180-213 (476)
230 1dxl_A Dihydrolipoamide dehydr 97.5 0.00029 9.8E-09 71.9 10.1 35 57-91 177-211 (470)
231 3ic9_A Dihydrolipoamide dehydr 97.5 0.0007 2.4E-08 69.4 12.3 36 57-92 174-209 (492)
232 3s5w_A L-ornithine 5-monooxyge 97.4 0.002 6.8E-08 65.5 14.2 36 56-91 226-263 (463)
233 3dgh_A TRXR-1, thioredoxin red 97.3 0.0013 4.4E-08 67.3 12.3 33 57-89 187-219 (483)
234 2zbw_A Thioredoxin reductase; 97.3 0.0011 3.6E-08 64.2 11.0 34 57-90 152-185 (335)
235 3ab1_A Ferredoxin--NADP reduct 97.3 0.00091 3.1E-08 65.5 10.5 47 293-340 213-263 (360)
236 3uox_A Otemo; baeyer-villiger 97.3 0.00099 3.4E-08 69.0 10.3 50 285-341 341-392 (545)
237 3dgz_A Thioredoxin reductase 2 97.2 0.0027 9.3E-08 64.9 12.7 32 58-89 186-217 (488)
238 3kd9_A Coenzyme A disulfide re 97.1 0.0025 8.5E-08 64.5 11.6 36 57-92 148-183 (449)
239 1gpe_A Protein (glucose oxidas 96.9 0.00053 1.8E-08 71.8 4.7 38 55-92 22-60 (587)
240 2x8g_A Thioredoxin glutathione 96.9 0.0083 2.8E-07 63.1 13.1 32 58-89 287-318 (598)
241 3qfa_A Thioredoxin reductase 1 96.8 0.0088 3E-07 61.6 12.5 32 58-89 211-242 (519)
242 2g1u_A Hypothetical protein TM 96.4 0.0037 1.3E-07 52.8 5.6 41 51-91 13-53 (155)
243 3fwz_A Inner membrane protein 96.4 0.0046 1.6E-07 51.2 5.8 37 55-91 5-41 (140)
244 1lss_A TRK system potassium up 96.2 0.0048 1.6E-07 50.9 4.8 34 57-90 4-37 (140)
245 4gcm_A TRXR, thioredoxin reduc 96.0 0.0051 1.8E-07 58.7 4.8 35 57-91 145-179 (312)
246 3klj_A NAD(FAD)-dependent dehy 95.9 0.0064 2.2E-07 60.0 5.1 38 57-94 146-183 (385)
247 3llv_A Exopolyphosphatase-rela 95.8 0.0087 3E-07 49.5 4.9 34 57-90 6-39 (141)
248 3ic5_A Putative saccharopine d 95.7 0.0096 3.3E-07 47.3 4.3 34 57-90 5-39 (118)
249 2v3a_A Rubredoxin reductase; a 95.5 0.017 5.9E-07 56.9 6.2 38 57-94 145-182 (384)
250 3ef6_A Toluene 1,2-dioxygenase 95.4 0.015 5.1E-07 57.9 5.7 39 56-94 142-180 (410)
251 4a5l_A Thioredoxin reductase; 95.4 0.013 4.3E-07 55.9 4.7 34 56-89 151-184 (314)
252 1id1_A Putative potassium chan 95.3 0.022 7.4E-07 47.8 5.4 33 57-89 3-35 (153)
253 4eqs_A Coenzyme A disulfide re 95.3 0.025 8.5E-07 56.8 6.8 59 57-132 147-205 (437)
254 2gqw_A Ferredoxin reductase; f 95.3 0.022 7.4E-07 56.7 6.2 38 57-94 145-182 (408)
255 3ado_A Lambda-crystallin; L-gu 95.1 0.018 6.2E-07 54.6 4.9 35 56-90 5-39 (319)
256 1ges_A Glutathione reductase; 95.1 0.022 7.4E-07 57.5 5.8 37 57-93 167-203 (450)
257 1f0y_A HCDH, L-3-hydroxyacyl-C 95.1 0.021 7.3E-07 54.1 5.3 34 57-90 15-48 (302)
258 3c85_A Putative glutathione-re 95.0 0.022 7.6E-07 49.4 4.9 35 56-90 38-73 (183)
259 2hmt_A YUAA protein; RCK, KTN, 95.0 0.026 8.9E-07 46.5 4.9 33 58-90 7-39 (144)
260 2r9z_A Glutathione amide reduc 94.8 0.029 9.9E-07 56.8 5.8 37 57-93 166-202 (463)
261 1pzg_A LDH, lactate dehydrogen 94.8 0.032 1.1E-06 53.6 5.6 36 55-90 7-43 (331)
262 3l4b_C TRKA K+ channel protien 94.8 0.022 7.5E-07 51.1 4.2 34 58-91 1-34 (218)
263 1q1r_A Putidaredoxin reductase 94.6 0.039 1.3E-06 55.3 6.0 37 57-93 149-185 (431)
264 3i83_A 2-dehydropantoate 2-red 94.6 0.033 1.1E-06 53.3 5.1 33 58-90 3-35 (320)
265 3fg2_P Putative rubredoxin red 94.5 0.03 1E-06 55.5 5.0 38 57-94 142-179 (404)
266 2x5o_A UDP-N-acetylmuramoylala 94.5 0.029 1E-06 56.3 4.9 37 57-93 5-41 (439)
267 3lk7_A UDP-N-acetylmuramoylala 94.5 0.032 1.1E-06 56.2 5.1 34 57-90 9-42 (451)
268 2hqm_A GR, grase, glutathione 94.4 0.042 1.4E-06 55.9 5.8 37 57-93 185-221 (479)
269 4b1b_A TRXR, thioredoxin reduc 94.4 0.035 1.2E-06 57.1 5.2 36 57-92 223-258 (542)
270 3d1c_A Flavin-containing putat 94.4 0.036 1.2E-06 54.0 5.1 34 57-90 166-199 (369)
271 1onf_A GR, grase, glutathione 94.3 0.038 1.3E-06 56.6 5.2 37 57-93 176-212 (500)
272 2y0c_A BCEC, UDP-glucose dehyd 94.3 0.036 1.2E-06 56.1 5.0 35 56-90 7-41 (478)
273 3hn2_A 2-dehydropantoate 2-red 94.3 0.035 1.2E-06 52.9 4.6 33 58-90 3-35 (312)
274 2dpo_A L-gulonate 3-dehydrogen 94.2 0.041 1.4E-06 52.4 4.9 34 57-90 6-39 (319)
275 2q0l_A TRXR, thioredoxin reduc 94.2 0.045 1.5E-06 51.9 5.2 35 57-91 143-177 (311)
276 4e12_A Diketoreductase; oxidor 94.2 0.04 1.4E-06 51.7 4.7 33 58-90 5-37 (283)
277 2xve_A Flavin-containing monoo 94.2 0.051 1.7E-06 55.0 5.7 37 56-92 196-232 (464)
278 2raf_A Putative dinucleotide-b 94.1 0.054 1.9E-06 48.1 5.2 36 56-91 18-53 (209)
279 3k6j_A Protein F01G10.3, confi 94.1 0.057 2E-06 53.9 5.8 36 56-91 53-88 (460)
280 3vtf_A UDP-glucose 6-dehydroge 94.1 0.048 1.6E-06 54.1 5.1 37 54-90 18-54 (444)
281 1ks9_A KPA reductase;, 2-dehyd 94.1 0.05 1.7E-06 51.1 5.2 33 58-90 1-33 (291)
282 3gwf_A Cyclohexanone monooxyge 94.0 0.039 1.3E-06 56.9 4.7 36 56-91 177-212 (540)
283 3dfz_A SIRC, precorrin-2 dehyd 94.0 0.049 1.7E-06 48.7 4.6 34 56-89 30-63 (223)
284 1fl2_A Alkyl hydroperoxide red 94.0 0.048 1.6E-06 51.7 4.9 35 57-91 144-178 (310)
285 1kyq_A Met8P, siroheme biosynt 93.9 0.034 1.2E-06 51.4 3.5 35 56-90 12-46 (274)
286 2cdu_A NADPH oxidase; flavoenz 93.9 0.052 1.8E-06 54.7 5.3 37 57-93 149-185 (452)
287 3e8x_A Putative NAD-dependent 93.9 0.061 2.1E-06 48.7 5.3 35 56-90 20-55 (236)
288 3k96_A Glycerol-3-phosphate de 93.9 0.05 1.7E-06 52.7 4.8 35 56-90 28-62 (356)
289 3doj_A AT3G25530, dehydrogenas 93.9 0.066 2.3E-06 50.9 5.6 37 55-91 19-55 (310)
290 3g17_A Similar to 2-dehydropan 93.9 0.046 1.6E-06 51.6 4.4 34 57-90 2-35 (294)
291 4dio_A NAD(P) transhydrogenase 93.8 0.064 2.2E-06 52.4 5.4 35 56-90 189-223 (405)
292 1lld_A L-lactate dehydrogenase 93.8 0.059 2E-06 51.5 5.2 35 56-90 6-42 (319)
293 3gg2_A Sugar dehydrogenase, UD 93.8 0.049 1.7E-06 54.6 4.7 33 58-90 3-35 (450)
294 3lxd_A FAD-dependent pyridine 93.8 0.069 2.4E-06 53.1 5.8 38 57-94 152-189 (415)
295 1zej_A HBD-9, 3-hydroxyacyl-CO 93.7 0.054 1.8E-06 50.8 4.6 34 56-90 11-44 (293)
296 2ew2_A 2-dehydropantoate 2-red 93.7 0.053 1.8E-06 51.5 4.7 32 58-89 4-35 (316)
297 1vdc_A NTR, NADPH dependent th 93.7 0.053 1.8E-06 51.9 4.7 36 56-91 158-193 (333)
298 4ap3_A Steroid monooxygenase; 93.7 0.05 1.7E-06 56.3 4.6 36 56-91 190-225 (549)
299 3ghy_A Ketopantoate reductase 93.6 0.067 2.3E-06 51.5 5.3 33 57-89 3-35 (335)
300 3ntd_A FAD-dependent pyridine 93.6 0.066 2.3E-06 55.7 5.6 37 57-93 151-187 (565)
301 3urh_A Dihydrolipoyl dehydroge 93.6 0.061 2.1E-06 54.8 5.2 35 57-91 198-232 (491)
302 2a9f_A Putative malic enzyme ( 93.6 0.061 2.1E-06 51.9 4.7 36 55-90 186-222 (398)
303 3dk9_A Grase, GR, glutathione 93.6 0.069 2.4E-06 54.2 5.5 37 57-93 187-223 (478)
304 3eag_A UDP-N-acetylmuramate:L- 93.6 0.07 2.4E-06 51.1 5.3 35 56-90 3-38 (326)
305 2q7v_A Thioredoxin reductase; 93.6 0.06 2E-06 51.4 4.8 35 57-91 152-186 (325)
306 3g79_A NDP-N-acetyl-D-galactos 93.5 0.064 2.2E-06 53.9 5.0 36 56-91 17-54 (478)
307 3l8k_A Dihydrolipoyl dehydroge 93.5 0.073 2.5E-06 53.9 5.5 35 57-91 172-206 (466)
308 4a7p_A UDP-glucose dehydrogena 93.5 0.077 2.6E-06 53.0 5.6 36 56-91 7-42 (446)
309 2a87_A TRXR, TR, thioredoxin r 93.5 0.063 2.1E-06 51.6 4.8 36 56-91 154-189 (335)
310 1trb_A Thioredoxin reductase; 93.5 0.063 2.2E-06 51.1 4.7 37 56-92 144-180 (320)
311 3p2y_A Alanine dehydrogenase/p 93.4 0.067 2.3E-06 51.8 4.8 35 56-90 183-217 (381)
312 3oc4_A Oxidoreductase, pyridin 93.4 0.082 2.8E-06 53.2 5.8 37 57-93 147-183 (452)
313 3pid_A UDP-glucose 6-dehydroge 93.4 0.061 2.1E-06 53.2 4.5 37 54-91 33-69 (432)
314 3cty_A Thioredoxin reductase; 93.4 0.1 3.6E-06 49.6 6.1 55 285-340 193-252 (319)
315 2gv8_A Monooxygenase; FMO, FAD 93.4 0.065 2.2E-06 53.9 4.8 37 56-92 211-248 (447)
316 3g0o_A 3-hydroxyisobutyrate de 93.3 0.073 2.5E-06 50.4 4.8 35 56-90 6-40 (303)
317 3hwr_A 2-dehydropantoate 2-red 93.3 0.069 2.4E-06 50.9 4.7 34 55-89 17-50 (318)
318 1vl6_A Malate oxidoreductase; 93.3 0.074 2.5E-06 51.3 4.8 34 56-89 191-225 (388)
319 2wpf_A Trypanothione reductase 93.3 0.079 2.7E-06 54.1 5.3 37 57-93 191-230 (495)
320 2hjr_A Malate dehydrogenase; m 93.2 0.093 3.2E-06 50.2 5.4 34 57-90 14-48 (328)
321 3ego_A Probable 2-dehydropanto 93.2 0.071 2.4E-06 50.6 4.6 33 57-90 2-34 (307)
322 3dtt_A NADP oxidoreductase; st 93.2 0.084 2.9E-06 48.2 4.9 36 56-91 18-53 (245)
323 3pef_A 6-phosphogluconate dehy 93.2 0.091 3.1E-06 49.3 5.2 34 58-91 2-35 (287)
324 1fec_A Trypanothione reductase 93.1 0.085 2.9E-06 53.7 5.3 37 57-93 187-226 (490)
325 1mv8_A GMD, GDP-mannose 6-dehy 93.1 0.065 2.2E-06 53.7 4.3 33 58-90 1-33 (436)
326 2vns_A Metalloreductase steap3 93.0 0.11 3.6E-06 46.4 5.2 35 56-90 27-61 (215)
327 3iwa_A FAD-dependent pyridine 93.0 0.081 2.8E-06 53.6 4.9 37 57-93 159-196 (472)
328 1z82_A Glycerol-3-phosphate de 93.0 0.097 3.3E-06 50.3 5.2 34 56-89 13-46 (335)
329 4dll_A 2-hydroxy-3-oxopropiona 92.9 0.085 2.9E-06 50.4 4.7 36 55-90 29-64 (320)
330 1zcj_A Peroxisomal bifunctiona 92.9 0.099 3.4E-06 52.7 5.3 34 57-90 37-70 (463)
331 3itj_A Thioredoxin reductase 1 92.8 0.088 3E-06 50.4 4.7 37 56-92 172-208 (338)
332 2vdc_G Glutamate synthase [NAD 92.8 0.12 4.2E-06 51.9 5.9 41 484-526 407-447 (456)
333 2v6b_A L-LDH, L-lactate dehydr 92.8 0.1 3.6E-06 49.3 5.0 33 58-90 1-35 (304)
334 1bg6_A N-(1-D-carboxylethyl)-L 92.7 0.094 3.2E-06 50.9 4.8 32 58-89 5-36 (359)
335 1mo9_A ORF3; nucleotide bindin 92.7 0.1 3.5E-06 53.6 5.3 36 58-93 215-250 (523)
336 2ewd_A Lactate dehydrogenase,; 92.7 0.1 3.5E-06 49.7 4.9 34 57-90 4-38 (317)
337 4g65_A TRK system potassium up 92.7 0.042 1.4E-06 55.3 2.3 36 56-91 2-37 (461)
338 3l9w_A Glutathione-regulated p 92.7 0.1 3.4E-06 51.7 4.9 36 56-91 3-38 (413)
339 3ics_A Coenzyme A-disulfide re 92.7 0.12 4E-06 54.1 5.7 38 57-94 187-224 (588)
340 3l6d_A Putative oxidoreductase 92.6 0.14 4.9E-06 48.4 5.8 35 56-90 8-42 (306)
341 1xdi_A RV3303C-LPDA; reductase 92.6 0.13 4.4E-06 52.5 5.8 37 57-93 182-218 (499)
342 1t2d_A LDH-P, L-lactate dehydr 92.4 0.15 5E-06 48.7 5.5 34 57-90 4-38 (322)
343 1txg_A Glycerol-3-phosphate de 92.4 0.087 3E-06 50.6 4.0 31 58-88 1-31 (335)
344 3qha_A Putative oxidoreductase 92.4 0.094 3.2E-06 49.4 4.1 35 57-91 15-49 (296)
345 1hyu_A AHPF, alkyl hydroperoxi 92.4 0.096 3.3E-06 53.8 4.5 35 57-91 355-389 (521)
346 1dlj_A UDP-glucose dehydrogena 92.3 0.079 2.7E-06 52.4 3.7 32 58-90 1-32 (402)
347 3mog_A Probable 3-hydroxybutyr 92.3 0.12 4.1E-06 52.2 5.0 35 57-91 5-39 (483)
348 3pdu_A 3-hydroxyisobutyrate de 92.3 0.1 3.6E-06 48.9 4.3 34 58-91 2-35 (287)
349 1guz_A Malate dehydrogenase; o 92.2 0.14 4.8E-06 48.6 5.2 33 58-90 1-35 (310)
350 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.058 2E-06 44.6 2.2 34 57-90 21-54 (144)
351 2h78_A Hibadh, 3-hydroxyisobut 92.2 0.11 3.9E-06 49.0 4.5 34 57-90 3-36 (302)
352 1x13_A NAD(P) transhydrogenase 92.1 0.15 5.1E-06 50.2 5.3 34 57-90 172-205 (401)
353 3dfu_A Uncharacterized protein 92.0 0.055 1.9E-06 48.6 1.9 35 55-89 4-38 (232)
354 3f8d_A Thioredoxin reductase ( 92.0 0.15 5.2E-06 48.3 5.2 35 57-91 154-188 (323)
355 4e21_A 6-phosphogluconate dehy 91.9 0.14 4.8E-06 49.6 4.8 34 57-90 22-55 (358)
356 1jay_A Coenzyme F420H2:NADP+ o 91.9 0.15 5.3E-06 45.1 4.8 32 58-89 1-33 (212)
357 3phh_A Shikimate dehydrogenase 91.9 0.18 6.3E-06 46.4 5.3 34 57-90 118-151 (269)
358 1jw9_B Molybdopterin biosynthe 91.9 0.14 4.7E-06 46.9 4.4 35 57-91 31-66 (249)
359 1nyt_A Shikimate 5-dehydrogena 91.8 0.18 6.1E-06 46.8 5.3 34 57-90 119-152 (271)
360 4ezb_A Uncharacterized conserv 91.8 0.15 5.3E-06 48.4 4.9 34 57-90 24-58 (317)
361 3r9u_A Thioredoxin reductase; 91.7 0.17 5.7E-06 47.8 5.1 35 57-91 147-181 (315)
362 2qyt_A 2-dehydropantoate 2-red 91.7 0.1 3.5E-06 49.6 3.6 32 57-88 8-45 (317)
363 1kdg_A CDH, cellobiose dehydro 91.6 0.23 7.8E-06 51.3 6.4 38 55-92 5-42 (546)
364 2uyy_A N-PAC protein; long-cha 91.6 0.23 7.8E-06 47.2 5.9 35 57-91 30-64 (316)
365 1ur5_A Malate dehydrogenase; o 91.6 0.2 6.7E-06 47.5 5.3 33 58-90 3-36 (309)
366 4dna_A Probable glutathione re 91.6 0.19 6.4E-06 50.7 5.5 37 57-93 170-206 (463)
367 4huj_A Uncharacterized protein 91.5 0.11 3.9E-06 46.4 3.5 34 57-90 23-57 (220)
368 1l7d_A Nicotinamide nucleotide 91.5 0.2 6.8E-06 49.1 5.5 35 56-90 171-205 (384)
369 3tl2_A Malate dehydrogenase; c 91.5 0.2 6.8E-06 47.5 5.2 33 57-89 8-41 (315)
370 3fbs_A Oxidoreductase; structu 91.5 0.42 1.4E-05 44.5 7.6 62 272-340 165-226 (297)
371 3gvi_A Malate dehydrogenase; N 91.4 0.22 7.5E-06 47.4 5.5 34 57-90 7-41 (324)
372 3o0h_A Glutathione reductase; 91.4 0.2 6.7E-06 50.9 5.5 37 57-93 191-227 (484)
373 2o3j_A UDP-glucose 6-dehydroge 91.4 0.15 5.2E-06 51.6 4.6 34 57-90 9-44 (481)
374 3qsg_A NAD-binding phosphogluc 91.4 0.16 5.3E-06 48.3 4.4 34 56-89 23-57 (312)
375 4ffl_A PYLC; amino acid, biosy 91.4 0.22 7.4E-06 48.4 5.6 34 58-91 2-35 (363)
376 4g6h_A Rotenone-insensitive NA 91.3 0.13 4.5E-06 52.4 4.1 58 58-132 218-289 (502)
377 2f1k_A Prephenate dehydrogenas 91.3 0.17 6E-06 47.0 4.7 33 58-90 1-33 (279)
378 3ktd_A Prephenate dehydrogenas 91.3 0.2 6.7E-06 48.1 5.1 35 56-90 7-41 (341)
379 3ggo_A Prephenate dehydrogenas 91.3 0.22 7.4E-06 47.3 5.3 35 56-90 32-68 (314)
380 1a5z_A L-lactate dehydrogenase 91.3 0.16 5.5E-06 48.3 4.5 33 58-90 1-35 (319)
381 3ldh_A Lactate dehydrogenase; 91.2 0.32 1.1E-05 46.2 6.3 35 56-90 20-56 (330)
382 1cjc_A Protein (adrenodoxin re 91.2 0.19 6.5E-06 50.6 5.0 36 56-91 144-200 (460)
383 1pjc_A Protein (L-alanine dehy 91.2 0.23 7.8E-06 48.2 5.4 33 58-90 168-200 (361)
384 2pv7_A T-protein [includes: ch 91.1 0.23 7.9E-06 46.7 5.3 34 57-90 21-55 (298)
385 1yqg_A Pyrroline-5-carboxylate 91.0 0.19 6.3E-06 46.3 4.5 32 58-89 1-33 (263)
386 3ew7_A LMO0794 protein; Q8Y8U8 91.0 0.25 8.6E-06 43.8 5.3 32 58-89 1-33 (221)
387 1oju_A MDH, malate dehydrogena 91.0 0.17 5.7E-06 47.5 4.1 33 58-90 1-35 (294)
388 1y6j_A L-lactate dehydrogenase 91.0 0.22 7.5E-06 47.3 5.0 35 56-90 6-42 (318)
389 2wtb_A MFP2, fatty acid multif 90.9 0.21 7.2E-06 53.3 5.3 34 57-90 312-345 (725)
390 2eez_A Alanine dehydrogenase; 90.9 0.22 7.4E-06 48.5 5.1 34 57-90 166-199 (369)
391 1p77_A Shikimate 5-dehydrogena 90.9 0.19 6.3E-06 46.7 4.4 35 56-90 118-152 (272)
392 3gpi_A NAD-dependent epimerase 90.8 0.28 9.6E-06 45.7 5.6 34 57-90 3-36 (286)
393 1evy_A Glycerol-3-phosphate de 90.8 0.16 5.4E-06 49.5 3.9 32 59-90 17-48 (366)
394 2gf2_A Hibadh, 3-hydroxyisobut 90.8 0.22 7.5E-06 46.8 4.8 33 58-90 1-33 (296)
395 1hyh_A L-hicdh, L-2-hydroxyiso 90.8 0.19 6.6E-06 47.6 4.4 33 58-90 2-36 (309)
396 3ius_A Uncharacterized conserv 90.7 0.2 6.9E-06 46.6 4.5 34 57-90 5-38 (286)
397 4gwg_A 6-phosphogluconate dehy 90.7 0.24 8.1E-06 49.9 5.2 36 56-91 3-38 (484)
398 3c24_A Putative oxidoreductase 90.6 0.33 1.1E-05 45.3 5.8 34 57-90 11-45 (286)
399 2egg_A AROE, shikimate 5-dehyd 90.6 0.25 8.5E-06 46.4 5.0 35 56-90 140-175 (297)
400 2q3e_A UDP-glucose 6-dehydroge 90.6 0.18 6.2E-06 50.8 4.3 34 57-90 5-40 (467)
401 3h2s_A Putative NADH-flavin re 90.5 0.29 9.8E-06 43.6 5.1 32 58-89 1-33 (224)
402 1vpd_A Tartronate semialdehyde 90.4 0.21 7.2E-06 47.0 4.3 33 58-90 6-38 (299)
403 3p7m_A Malate dehydrogenase; p 90.4 0.32 1.1E-05 46.2 5.5 34 57-90 5-39 (321)
404 2i6t_A Ubiquitin-conjugating e 90.3 0.25 8.4E-06 46.6 4.6 35 56-90 13-49 (303)
405 2izz_A Pyrroline-5-carboxylate 90.3 0.27 9.1E-06 46.9 4.9 35 56-90 21-59 (322)
406 3cky_A 2-hydroxymethyl glutara 90.3 0.23 7.8E-06 46.8 4.4 34 57-90 4-37 (301)
407 1pjq_A CYSG, siroheme synthase 90.3 0.25 8.5E-06 49.6 4.9 34 56-89 11-44 (457)
408 4b4o_A Epimerase family protei 90.3 0.33 1.1E-05 45.5 5.6 33 58-90 1-34 (298)
409 3pqe_A L-LDH, L-lactate dehydr 90.2 0.28 9.7E-06 46.6 5.0 34 56-89 4-39 (326)
410 3nep_X Malate dehydrogenase; h 90.2 0.25 8.5E-06 46.7 4.6 33 58-90 1-35 (314)
411 2zyd_A 6-phosphogluconate dehy 90.2 0.21 7.1E-06 50.5 4.2 35 56-90 14-48 (480)
412 3ojo_A CAP5O; rossmann fold, c 90.1 0.21 7.1E-06 49.5 4.1 34 58-91 12-45 (431)
413 1m6i_A Programmed cell death p 90.1 0.27 9.4E-06 50.0 5.1 36 57-92 180-219 (493)
414 3c4a_A Probable tryptophan hyd 90.1 0.68 2.3E-05 45.1 7.9 47 282-341 98-144 (381)
415 2p4q_A 6-phosphogluconate dehy 90.0 0.31 1.1E-05 49.4 5.4 35 56-90 9-43 (497)
416 2vhw_A Alanine dehydrogenase; 90.0 0.33 1.1E-05 47.4 5.4 35 56-90 167-201 (377)
417 1yj8_A Glycerol-3-phosphate de 90.0 0.2 6.8E-06 49.0 3.9 34 58-91 22-62 (375)
418 3gt0_A Pyrroline-5-carboxylate 89.9 0.31 1.1E-05 44.4 4.9 33 58-90 3-39 (247)
419 4a9w_A Monooxygenase; baeyer-v 89.9 0.24 8.1E-06 47.6 4.3 33 56-89 162-194 (357)
420 2rcy_A Pyrroline carboxylate r 89.8 0.26 8.8E-06 45.3 4.4 35 57-91 4-42 (262)
421 1o94_A Tmadh, trimethylamine d 89.8 0.26 9E-06 52.8 5.0 35 56-90 527-563 (729)
422 2g5c_A Prephenate dehydrogenas 89.8 0.33 1.1E-05 45.2 5.1 32 58-89 2-35 (281)
423 3don_A Shikimate dehydrogenase 89.8 0.28 9.7E-06 45.4 4.5 36 56-91 116-152 (277)
424 3rui_A Ubiquitin-like modifier 89.8 0.35 1.2E-05 46.0 5.2 36 56-91 33-69 (340)
425 3k30_A Histamine dehydrogenase 89.8 0.44 1.5E-05 50.7 6.6 39 56-94 522-562 (690)
426 2pgd_A 6-phosphogluconate dehy 89.8 0.31 1.1E-05 49.4 5.2 33 58-90 3-35 (482)
427 1wdk_A Fatty oxidation complex 89.7 0.26 8.8E-06 52.5 4.7 34 57-90 314-347 (715)
428 1x0v_A GPD-C, GPDH-C, glycerol 89.7 0.17 5.8E-06 49.0 3.1 34 58-91 9-49 (354)
429 2aef_A Calcium-gated potassium 89.7 0.15 5E-06 46.2 2.5 35 56-91 8-42 (234)
430 2cvz_A Dehydrogenase, 3-hydrox 89.6 0.27 9.1E-06 46.0 4.3 32 58-90 2-33 (289)
431 2qrj_A Saccharopine dehydrogen 89.6 0.31 1.1E-05 47.2 4.7 40 56-95 213-257 (394)
432 3h8v_A Ubiquitin-like modifier 89.5 0.26 9E-06 45.9 4.1 36 56-91 35-71 (292)
433 1zud_1 Adenylyltransferase THI 89.4 0.35 1.2E-05 44.2 4.8 36 56-91 27-63 (251)
434 1gte_A Dihydropyrimidine dehyd 89.4 0.29 9.9E-06 54.7 5.0 33 58-90 333-366 (1025)
435 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.4 0.3 1E-05 49.3 4.7 33 58-90 2-34 (478)
436 2hk9_A Shikimate dehydrogenase 89.3 0.3 1E-05 45.3 4.4 35 56-90 128-162 (275)
437 1hdo_A Biliverdin IX beta redu 89.3 0.41 1.4E-05 41.8 5.1 33 58-90 4-37 (206)
438 1edz_A 5,10-methylenetetrahydr 89.3 0.33 1.1E-05 45.7 4.5 34 56-89 176-210 (320)
439 3tnl_A Shikimate dehydrogenase 89.3 0.42 1.4E-05 45.1 5.3 34 56-89 153-187 (315)
440 3fbt_A Chorismate mutase and s 89.3 0.38 1.3E-05 44.6 5.0 35 56-90 121-156 (282)
441 4aj2_A L-lactate dehydrogenase 89.3 0.46 1.6E-05 45.2 5.7 35 55-89 17-53 (331)
442 3tri_A Pyrroline-5-carboxylate 89.3 0.43 1.5E-05 44.4 5.4 34 57-90 3-39 (280)
443 2rir_A Dipicolinate synthase, 89.2 0.42 1.4E-05 45.0 5.3 35 56-90 156-190 (300)
444 3u62_A Shikimate dehydrogenase 89.2 0.42 1.4E-05 43.6 5.2 32 59-90 110-142 (253)
445 2ahr_A Putative pyrroline carb 89.1 0.31 1.1E-05 44.7 4.4 34 57-90 3-36 (259)
446 3c7a_A Octopine dehydrogenase; 89.1 0.18 6.3E-06 49.8 2.9 30 58-87 3-33 (404)
447 1i36_A Conserved hypothetical 89.0 0.32 1.1E-05 44.7 4.4 31 58-88 1-31 (264)
448 3pwz_A Shikimate dehydrogenase 89.0 0.45 1.5E-05 43.9 5.3 35 56-90 119-154 (272)
449 3jyo_A Quinate/shikimate dehyd 89.0 0.45 1.5E-05 44.2 5.3 35 56-90 126-161 (283)
450 3zwc_A Peroxisomal bifunctiona 89.0 0.44 1.5E-05 50.7 5.8 36 56-91 315-350 (742)
451 3d4o_A Dipicolinate synthase s 89.0 0.46 1.6E-05 44.5 5.4 35 56-90 154-188 (293)
452 3lzw_A Ferredoxin--NADP reduct 88.9 0.45 1.5E-05 45.1 5.5 52 286-339 193-249 (332)
453 4id9_A Short-chain dehydrogena 88.9 0.41 1.4E-05 46.0 5.2 37 55-91 17-54 (347)
454 4gbj_A 6-phosphogluconate dehy 88.8 0.32 1.1E-05 45.7 4.2 34 58-91 6-39 (297)
455 3vku_A L-LDH, L-lactate dehydr 88.8 0.41 1.4E-05 45.5 4.9 34 56-89 8-43 (326)
456 3ond_A Adenosylhomocysteinase; 88.7 0.4 1.4E-05 47.9 4.9 35 56-90 264-298 (488)
457 1yb4_A Tartronic semialdehyde 88.7 0.27 9.1E-06 46.1 3.6 32 58-90 4-35 (295)
458 1np3_A Ketol-acid reductoisome 88.7 0.45 1.5E-05 45.6 5.2 34 57-90 16-49 (338)
459 3o8q_A Shikimate 5-dehydrogena 88.6 0.47 1.6E-05 44.1 5.1 35 56-90 125-160 (281)
460 3d1l_A Putative NADP oxidoredu 88.6 0.34 1.1E-05 44.7 4.2 34 57-90 10-44 (266)
461 2gag_A Heterotetrameric sarcos 88.6 0.23 7.9E-06 55.0 3.5 36 58-93 285-320 (965)
462 1lqt_A FPRA; NADP+ derivative, 88.4 0.4 1.4E-05 48.1 4.9 36 56-91 146-202 (456)
463 1nvt_A Shikimate 5'-dehydrogen 88.4 0.35 1.2E-05 45.2 4.2 32 57-89 128-159 (287)
464 3fi9_A Malate dehydrogenase; s 88.3 0.55 1.9E-05 44.9 5.5 33 57-89 8-43 (343)
465 3t4e_A Quinate/shikimate dehyd 88.2 0.56 1.9E-05 44.2 5.4 34 56-89 147-181 (312)
466 1ldn_A L-lactate dehydrogenase 88.0 0.47 1.6E-05 45.0 4.8 35 56-90 5-41 (316)
467 2dvm_A Malic enzyme, 439AA lon 87.9 0.5 1.7E-05 46.7 5.0 32 56-87 185-219 (439)
468 1mld_A Malate dehydrogenase; o 87.8 0.45 1.5E-05 45.1 4.5 33 58-90 1-36 (314)
469 3dhn_A NAD-dependent epimerase 87.7 0.46 1.6E-05 42.4 4.4 34 57-90 4-38 (227)
470 3vps_A TUNA, NAD-dependent epi 87.7 0.62 2.1E-05 44.0 5.5 36 56-91 6-42 (321)
471 2x0j_A Malate dehydrogenase; o 87.7 0.44 1.5E-05 44.5 4.3 33 58-90 1-35 (294)
472 2zqz_A L-LDH, L-lactate dehydr 87.6 0.52 1.8E-05 44.8 4.9 35 55-89 7-43 (326)
473 1w4x_A Phenylacetone monooxyge 87.6 0.43 1.5E-05 49.2 4.6 36 56-91 185-220 (542)
474 2d5c_A AROE, shikimate 5-dehyd 87.6 0.55 1.9E-05 43.1 4.9 32 59-90 118-149 (263)
475 1npy_A Hypothetical shikimate 87.6 0.56 1.9E-05 43.3 4.9 33 57-89 119-152 (271)
476 3d0o_A L-LDH 1, L-lactate dehy 87.4 0.53 1.8E-05 44.7 4.7 33 57-89 6-40 (317)
477 2iz1_A 6-phosphogluconate dehy 87.2 0.52 1.8E-05 47.5 4.9 33 58-90 6-38 (474)
478 1y1p_A ARII, aldehyde reductas 87.2 0.91 3.1E-05 43.2 6.5 35 55-89 9-44 (342)
479 3h5n_A MCCB protein; ubiquitin 87.2 0.53 1.8E-05 45.4 4.7 36 56-91 117-153 (353)
480 3dqp_A Oxidoreductase YLBE; al 87.1 0.51 1.8E-05 41.8 4.3 33 58-90 1-34 (219)
481 2pzm_A Putative nucleotide sug 87.0 0.7 2.4E-05 44.0 5.4 35 56-90 19-54 (330)
482 2yjz_A Metalloreductase steap4 86.9 0.12 4.1E-06 45.5 0.0 35 56-90 18-52 (201)
483 1leh_A Leucine dehydrogenase; 86.9 0.69 2.4E-05 44.6 5.3 34 56-89 172-205 (364)
484 3hyw_A Sulfide-quinone reducta 86.9 0.35 1.2E-05 48.2 3.3 44 292-340 66-109 (430)
485 2dbq_A Glyoxylate reductase; D 86.8 0.73 2.5E-05 44.0 5.4 36 56-91 149-184 (334)
486 1lu9_A Methylene tetrahydromet 86.8 0.76 2.6E-05 42.9 5.4 34 57-90 119-153 (287)
487 3gvp_A Adenosylhomocysteinase 86.7 0.64 2.2E-05 45.6 4.9 35 56-90 219-253 (435)
488 3r6d_A NAD-dependent epimerase 86.7 0.78 2.7E-05 40.7 5.3 32 59-90 7-40 (221)
489 4gsl_A Ubiquitin-like modifier 86.7 0.73 2.5E-05 47.3 5.5 41 56-96 325-366 (615)
490 3ce6_A Adenosylhomocysteinase; 86.5 0.63 2.2E-05 46.8 4.9 35 56-90 273-307 (494)
491 1a4i_A Methylenetetrahydrofola 86.5 0.77 2.6E-05 42.6 5.1 34 56-89 164-198 (301)
492 4hv4_A UDP-N-acetylmuramate--L 86.5 0.5 1.7E-05 48.0 4.3 35 56-90 21-56 (494)
493 3obb_A Probable 3-hydroxyisobu 86.5 0.59 2E-05 43.9 4.5 34 57-90 3-36 (300)
494 3vh1_A Ubiquitin-like modifier 86.4 0.63 2.2E-05 47.7 4.9 36 56-91 326-362 (598)
495 3b1f_A Putative prephenate deh 86.3 0.64 2.2E-05 43.4 4.7 33 57-89 6-40 (290)
496 4a26_A Putative C-1-tetrahydro 86.2 0.81 2.8E-05 42.5 5.1 34 56-89 164-198 (300)
497 1ez4_A Lactate dehydrogenase; 86.2 0.61 2.1E-05 44.2 4.4 34 56-89 4-39 (318)
498 3fpz_A Thiazole biosynthetic e 86.1 0.52 1.8E-05 44.8 4.0 41 483-523 280-325 (326)
499 1smk_A Malate dehydrogenase, g 86.0 0.55 1.9E-05 44.7 4.0 36 56-91 7-45 (326)
500 1gpj_A Glutamyl-tRNA reductase 85.9 0.67 2.3E-05 45.7 4.7 35 56-90 166-201 (404)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.4e-37 Score=317.78 Aligned_cols=416 Identities=18% Similarity=0.260 Sum_probs=288.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeec--cCcccHHHHHHhcCCCcccc
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFF--GAYPNIQNLFGELGINDRLQ 135 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~--~~~~~~~~l~~~lgl~~~~~ 135 (540)
+||+|||||++||+||++|+++|++|+|||+++.+||++.++. .+|+.+|.|++.+. .....+.++++++|++....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5999999999999999999999999999999999999999876 67999999975554 23456889999999875433
Q ss_pred cccccceee-cCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHHH
Q 009198 136 WKEHSMIFA-MPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (540)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (540)
......... ..+....+ .... ....+.. + ...+.+.++.+....+... .. ...+..++.+|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~---~---~~~~~~~~~~~~~~~~~~~----~~--~~~~~~s~~~~l~ 143 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDY---VKGF-KDISFND---F---PSLLSYKDRMKIALLIVST----RK--NRPSGSSLQAWIK 143 (425)
T ss_dssp ECCCCEEEEESSTTCCSS---TTCE-EEEEGGG---G---GGGSCHHHHHHHHHHHHHT----TT--SCCCSSBHHHHHH
T ss_pred ecCCceEEeecCCCcccc---cccc-cceehhh---h---hhhCCHHHHHHHHHHHHhh----hh--cCCCCCCHHHHHH
Confidence 222111111 11000000 0000 0000000 0 1122333333222211110 00 1234679999999
Q ss_pred HhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhhhccCcceeeecCCCCccchhHHHHHHHH
Q 009198 215 KQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQS 294 (540)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~ 294 (540)
+. +.....+.++.++.....+.++++++.......+..... .+. ..++.+| ++.+++.|.+.+++
T Consensus 144 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~-~~~~~gG-~~~l~~~l~~~~~~ 208 (425)
T 3ka7_A 144 SQ-----------VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYR--FGG-TGIPEGG-CKGIIDALETVISA 208 (425)
T ss_dssp HH-----------CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTS-HHHHHHHHHHHHHH
T ss_pred Hh-----------cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHh--cCC-ccccCCC-HHHHHHHHHHHHHH
Confidence 87 455566777777777777788889988766655554322 222 3567777 78999999999999
Q ss_pred cCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCC-ch--hhHHHHHHhccCCcCeEEEEE
Q 009198 295 LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN-WK--EMAYFKRLEKLVGVPVINIHI 371 (540)
Q Consensus 295 ~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~-~~--~~~~~~~~~~~~~~~~~~i~l 371 (540)
+|++|+++++|++|.. +++++++|++. |+++.||+||+|+|++.+.+|+++. .. +..+.+++.++.+.+.+++++
T Consensus 209 ~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 286 (425)
T 3ka7_A 209 NGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICL 286 (425)
T ss_dssp TTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEE
T ss_pred cCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEe
Confidence 9999999999999998 56677778875 6689999999999999999999753 22 567788888888888899999
Q ss_pred EeccccccccCcceeecCC-ceeEEeccCcccccccCCCccEEEEEeeccccccCCC-hHHHHHHHHHHHHHhCCCcccc
Q 009198 372 WFDRKLKNTYDHLLFSRSS-LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCS-DSEIIDATMKELAKLFPDEISA 449 (540)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~e~~~~~v~~~l~~~~p~~~~~ 449 (540)
.|+++.+.. ..+++..+. ....+..+|..+++++|++.+++.+.... .|.... .++.++.++++|++++|+ ...
T Consensus 287 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~p~-~~~ 362 (425)
T 3ka7_A 287 AADEPLVGH-TGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYV--APENVKNLESEIEMGLEDLKEIFPG-KRY 362 (425)
T ss_dssp EESSCSSCS-SSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEE--CGGGGGGHHHHHHHHHHHHHHHSTT-CCE
T ss_pred ecCCCccCc-CEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecc--ccccccchHHHHHHHHHHHHHhCCC-Cce
Confidence 999987643 344443332 12223456677888999999888664432 233221 245679999999999987 221
Q ss_pred ccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHH
Q 009198 450 DQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 519 (540)
Q Consensus 450 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~ 519 (540)
.++ .+.+|+.+++.+.++.. .++..++|++|||+|||++.+.+..+|++|+.||++||++|+
T Consensus 363 -----~~~--~v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 363 -----EVL--LIQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp -----EEE--EEEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred -----EEE--EEEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 222 45677777777766643 456778899999999999999766899999999999999986
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=7e-38 Score=327.84 Aligned_cols=432 Identities=18% Similarity=0.207 Sum_probs=284.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCcccc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 135 (540)
.++||+|||||++||+||+.|++.|++|+|+|+++++||++.+....+|+.+|.|++++.+.+..+.++++++|++....
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 82 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKV 82 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceec
Confidence 35799999999999999999999999999999999999999987743589999999999877778899999999876433
Q ss_pred cccccceeecCCCCCCcccccCCCCCCCc-----hhHHHHhhhcCCCCChhHHHHhhhchhhh-HhcCcccccccCCCCH
Q 009198 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAP-----LNGILAILRNNEMLTWPEKVKFAIGLLPA-IIGGQAYVEAQDGLTV 209 (540)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~ 209 (540)
+......+... +.. +.+...++.. ...+..++. ....+...... ...........+..++
T Consensus 83 ~~~~~~~~~~~---g~~--~~~~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 148 (520)
T 1s3e_A 83 NEVERLIHHVK---GKS--YPFRGPFPPVWNPITYLDHNNFWR---------TMDDMGREIPSDAPWKAPLAEEWDNMTM 148 (520)
T ss_dssp CCSSEEEEEET---TEE--EEECSSSCCCCSHHHHHHHHHHHH---------HHHHHHTTSCTTCGGGSTTHHHHHTSBH
T ss_pred ccCCceEEEEC---CEE--EEecCCCCCCCCHHHHHHHHHHHH---------HHHHHHhhcCcCCCccccchhhhhccCH
Confidence 22222222111 111 1111112210 001111110 00000000000 0000000112356899
Q ss_pred HHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHH------hhhccCcceeeecCCCCcc
Q 009198 210 QEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF------LQEKHGSKMAFLDGNPPER 283 (540)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~------~~~~~g~~~~~~~gg~~~~ 283 (540)
.+|+++. .... ..+.++..+....++.++++++.......+... +....+....++.+| ++.
T Consensus 149 ~~~l~~~----------~~~~-~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG-~~~ 216 (520)
T 1s3e_A 149 KELLDKL----------CWTE-SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGG-SGQ 216 (520)
T ss_dssp HHHHHHH----------CSSH-HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTC-THH
T ss_pred HHHHHhh----------CCCH-HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCC-HHH
Confidence 9999988 4443 446677777777777888888887665433211 111123344566777 788
Q ss_pred chhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCC
Q 009198 284 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVG 363 (540)
Q Consensus 284 l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 363 (540)
+++.|++.+ |++|+++++|++|.. +++.+. |++.+|+++.||+||+|+|+..+.+++.++.++....++++++.+
T Consensus 217 l~~~l~~~l---g~~i~~~~~V~~i~~-~~~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~ 291 (520)
T 1s3e_A 217 VSERIMDLL---GDRVKLERPVIYIDQ-TRENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPL 291 (520)
T ss_dssp HHHHHHHHH---GGGEESSCCEEEEEC-SSSSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCB
T ss_pred HHHHHHHHc---CCcEEcCCeeEEEEE-CCCeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCC
Confidence 888888766 789999999999987 444554 889999889999999999999988886544566677888999999
Q ss_pred cCeEEEEEEeccccccccC--ccee--ecCCceeEEeccCcccccccCCCccEEEEEeec--cccccCCChHHHHHHHHH
Q 009198 364 VPVINIHIWFDRKLKNTYD--HLLF--SRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMK 437 (540)
Q Consensus 364 ~~~~~i~l~~~~~~~~~~~--~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~v~~ 437 (540)
.++.|+++.|++++|+..+ +..+ .........++.+ ..+.+..++..+... ...|..++++++++.+++
T Consensus 292 ~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~-----~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~ 366 (520)
T 1s3e_A 292 GSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDT-----KPEGNYAAIMGFILAHKARKLARLTKEERLKKLCE 366 (520)
T ss_dssp CCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEEEECC-----CTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHH
T ss_pred cceEEEEEEeCCCcccCCCCCceeeccCCCCceEEEeeCC-----CCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHH
Confidence 9999999999999996432 2222 1111111222221 112222444443332 367888899999999999
Q ss_pred HHHHhCCCccccccccceEEEEEEecCCCc--eec--cCCCC-CCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHH
Q 009198 438 ELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGK 512 (540)
Q Consensus 438 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~--~~~~~-~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~ 512 (540)
+|++++|...... ...+....|...|++ .|. +.|+. ....+..++|++||||||++++..|+++|+||+.||+
T Consensus 367 ~L~~~~~~~~~~~--p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~ 444 (520)
T 1s3e_A 367 LYAKVLGSLEALE--PVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGE 444 (520)
T ss_dssp HHHHHHTCGGGGC--CSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHH
T ss_pred HHHHHhCccccCC--ccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHH
Confidence 9999998631111 223445556655654 232 23332 1123456778999999999998777789999999999
Q ss_pred HHHHHHHHHHhHH
Q 009198 513 LCAQAIVQDYVLL 525 (540)
Q Consensus 513 ~aA~~v~~~l~~~ 525 (540)
+||++|++.++..
T Consensus 445 ~aA~~i~~~l~~~ 457 (520)
T 1s3e_A 445 RAAREILHAMGKI 457 (520)
T ss_dssp HHHHHHHHHTTSS
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998653
No 3
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=2.7e-37 Score=321.74 Aligned_cols=431 Identities=15% Similarity=0.100 Sum_probs=278.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCccccc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQW 136 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~ 136 (540)
++||+|||||++||+||+.|++.|++|+|+|+++++||++.+.. .+|+.+|.|++++.+.++++.++++++|+...+..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~ 117 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSP 117 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeec
Confidence 47999999999999999999999999999999999999999977 57899999999998888889999999998544322
Q ss_pred cc----ccceeecCCCCCCcccccCCCCCCC--chhHHH----HhhhcCCCCChhHHHHhhhchhhh-Hh-cCccccccc
Q 009198 137 KE----HSMIFAMPNKPGEFSRFDFPEVLPA--PLNGIL----AILRNNEMLTWPEKVKFAIGLLPA-II-GGQAYVEAQ 204 (540)
Q Consensus 137 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 204 (540)
.. ....+......+.... ++. ....+. .+.+... . ....+.+. .. .........
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~ 183 (495)
T 2vvm_A 118 SFNFSRGVNHFQLRTNPTTSTY------MTHEAEDELLRSALHKFTNVDG-T-------NGRTVLPFPHDMFYVPEFRKY 183 (495)
T ss_dssp SCCCSSSCCEEEEESSTTCCEE------ECHHHHHHHHHHHHHHHHCSSS-S-------TTTTTCSCTTSTTSSTTHHHH
T ss_pred ccccCCCceEEEecCCCCceee------cCHHHHHHHHHHHHHHHHccch-h-------hhhhcCCCCCCcccCcchhhh
Confidence 21 1111111110011100 111 000011 1111000 0 00000000 00 000011234
Q ss_pred CCCCHHHHHHHhCCCchhhhhcC--CChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhhh----ccCcceeeecC
Q 009198 205 DGLTVQEWMRKQVQPSDLVRELG--VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE----KHGSKMAFLDG 278 (540)
Q Consensus 205 ~~~s~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~----~~g~~~~~~~g 278 (540)
+..++.+|+++. + ++.. .+.++.++....++.+++++++......+...... ........+.+
T Consensus 184 ~~~s~~~~l~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 252 (495)
T 2vvm_A 184 DEMSYSERIDQI----------RDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKD 252 (495)
T ss_dssp HTSBHHHHHHHH----------GGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETT
T ss_pred hhhhHHHHHHHh----------hccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCC
Confidence 567899999887 4 4443 45677777777777888888877665443211000 00112334566
Q ss_pred CCCccchhHHHHHHHHcC-cEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHH
Q 009198 279 NPPERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKR 357 (540)
Q Consensus 279 g~~~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~ 357 (540)
| +..+++.|.+.+.+.| ++|+++++|++|+.. ++.+ .|++.+|+++.||+||+|+|+..+..++..+.+|....++
T Consensus 253 G-~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~a 329 (495)
T 2vvm_A 253 G-QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISA 329 (495)
T ss_dssp C-HHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHH
T ss_pred C-HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHH
Confidence 6 7899999999999998 999999999999974 4444 5888898889999999999999988875444456677888
Q ss_pred HhccCCcCeEEEEEEeccccccccCcceeecCCceeEEeccCcccccccCCCccEEEEEeeccccccCCChHHHHHHHHH
Q 009198 358 LEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMK 437 (540)
Q Consensus 358 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~ 437 (540)
++.+.+.++.+|++.|++++|..+.++...+.++..++ + ....+.+..++..+ .+.. ..+++++..+.+++
T Consensus 330 i~~~~~~~~~kv~l~~~~~~~~~~~g~~~~~~~~~~~~-~-----~~~~~~~~~vl~~~-~~~~--~~~~~~e~~~~~~~ 400 (495)
T 2vvm_A 330 MQAGHVSMCTKVHAEVDNKDMRSWTGIAYPFNKLCYAI-G-----DGTTPAGNTHLVCF-GNSA--NHIQPDEDVRETLK 400 (495)
T ss_dssp HHHCCCCCCEEEEEEESCGGGGGEEEEECSSCSSCEEE-E-----EEECTTSCEEEEEE-ECST--TCCCTTTCHHHHHH
T ss_pred HHhcCCCceeEEEEEECCccCCCceeEecCCCCcEEEe-c-----CCCCCCCCeEEEEE-eCcc--ccCCCHHHHHHHHH
Confidence 88999999999999999998865444333333332222 1 11223444455443 3321 12456677888999
Q ss_pred HHHHhCCCccccccccceEEEEEEecCCCce--ec-cCCCCC-CCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHH
Q 009198 438 ELAKLFPDEISADQSKAKIVKYHVVKTPRSV--YK-TIPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKL 513 (540)
Q Consensus 438 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~--~~-~~~~~~-~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~ 513 (540)
+|.+++|.... ...+....|...|++. |. +.|+.. ...+.+++|.+||||||++++..|+++|+||+.||++
T Consensus 401 ~L~~~~~~~~~----~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~r 476 (495)
T 2vvm_A 401 AVGQLAPGTFG----VKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTR 476 (495)
T ss_dssp HHHTTSTTSCC----EEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHH
T ss_pred HHHHhcCCCCC----ceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHH
Confidence 99999875211 1223334454556542 32 233421 1233445678999999999987778999999999999
Q ss_pred HHHHHHHHHhHHHhhc
Q 009198 514 CAQAIVQDYVLLAARG 529 (540)
Q Consensus 514 aA~~v~~~l~~~~~~~ 529 (540)
||++|++.++...+.+
T Consensus 477 aA~~i~~~l~~~~~~~ 492 (495)
T 2vvm_A 477 AARVVLEELGTKREVK 492 (495)
T ss_dssp HHHHHHHHHCCC----
T ss_pred HHHHHHHHhccccCCC
Confidence 9999999887554443
No 4
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=4.9e-36 Score=308.87 Aligned_cols=426 Identities=16% Similarity=0.147 Sum_probs=274.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCcccc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 135 (540)
.++||+|||||++||+||+.|++.|++|+|+|+++.+||++.+... +|..+|.|++++......+.++++++|++....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQTALISLLDELGLKTFER 82 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCHHHHHHHHHTTCCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccHHHHHHHHHcCCccccc
Confidence 3579999999999999999999999999999999999999988764 688999999998877777899999999876443
Q ss_pred cccccceeecCCCCCCcccccCCCCCC-CchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcC----cccccccCCCCHH
Q 009198 136 WKEHSMIFAMPNKPGEFSRFDFPEVLP-APLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGG----QAYVEAQDGLTVQ 210 (540)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~ 210 (540)
+......+... .+.. +.+....+ ........+.. ....+..+....... .......+..++.
T Consensus 83 ~~~~~~~~~~~--~g~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 149 (453)
T 2yg5_A 83 YREGESVYISS--AGER--TRYTGDSFPTNETTKKEMDR---------LIDEMDDLAAQIGAEEPWAHPLARDLDTVSFK 149 (453)
T ss_dssp CCCSEEEEECT--TSCE--EEECSSSCSCCHHHHHHHHH---------HHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHH
T ss_pred ccCCCEEEEeC--CCce--eeccCCCCCCChhhHHHHHH---------HHHHHHHHHhhcCCCCCCCCcchhhhhhccHH
Confidence 33322222211 0111 11111111 11111111100 000000010000000 0011123468999
Q ss_pred HHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCc-cchHHHHHHHHHHHhh-----hccCcceeeecCCCCccc
Q 009198 211 EWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPD-ELSMQCILIALNRFLQ-----EKHGSKMAFLDGNPPERL 284 (540)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~-----~~~g~~~~~~~gg~~~~l 284 (540)
+|+++. +.. ...+.++.++....++.+++ +++.......+..... ...+..+.++.|| ++.+
T Consensus 150 ~~l~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG-~~~l 217 (453)
T 2yg5_A 150 QWLINQ----------SDD-AEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGG-MQQV 217 (453)
T ss_dssp HHHHHH----------CSC-HHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTC-THHH
T ss_pred HHHHhh----------cCC-HHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCC-hHHH
Confidence 999988 444 34556777777666677888 8887766543322100 0012234567777 7889
Q ss_pred hhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCc
Q 009198 285 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGV 364 (540)
Q Consensus 285 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 364 (540)
++.|++.+ |++|+++++|++|..+ ++..+.|++ +|+++.||+||+|+|+..+.+|+..+.+|....++++++.+.
T Consensus 218 ~~~l~~~l---g~~i~~~~~V~~i~~~-~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~ 292 (453)
T 2yg5_A 218 SIRMAEAL---GDDVFLNAPVRTVKWN-ESGATVLAD-GDIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLG 292 (453)
T ss_dssp HHHHHHHH---GGGEECSCCEEEEEEE-TTEEEEEET-TTEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEEC
T ss_pred HHHHHHhc---CCcEEcCCceEEEEEe-CCceEEEEE-CCeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCc
Confidence 99988765 6899999999999874 444134666 666899999999999999888875555666777888888888
Q ss_pred CeEEEEEEeccccccccC--cceeec-CCceeEEeccCcccccccCCC-ccEEEEEeec--cccccCCChHHHHHHHHHH
Q 009198 365 PVINIHIWFDRKLKNTYD--HLLFSR-SSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDATMKE 438 (540)
Q Consensus 365 ~~~~i~l~~~~~~~~~~~--~~~~~~-~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~e~~~~~v~~~ 438 (540)
++.|+++.|++++|+..+ +..+.. .++. ..++.+ .+++ ..++..+... ...|..++++++++.++++
T Consensus 293 ~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~-~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 365 (453)
T 2yg5_A 293 LVIKVHAVYETPFWREDGLSGTGFGASEVVQ-EVYDNT------NHEDDRGTLVAFVSDEKADAMFELSAEERKATILAS 365 (453)
T ss_dssp CEEEEEEEESSCGGGGGTEEEEEECTTSSSC-EEEECC------CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCCCCCCCceeecCCCCeE-EEEeCC------CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHH
Confidence 999999999999986432 222222 2222 222222 2233 2344333322 3567778899999999999
Q ss_pred HHHhCCCccccccccceEEEEEEecCCCc--eec--cCCCC-CCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHH
Q 009198 439 LAKLFPDEISADQSKAKIVKYHVVKTPRS--VYK--TIPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKL 513 (540)
Q Consensus 439 l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~--~~~~~-~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~ 513 (540)
|++++|.... . ...+....|...|++ .|. +.++. ....+..++|++||||||++++..|+++|+||+.||++
T Consensus 366 L~~~~~~~~~-~--p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~ 442 (453)
T 2yg5_A 366 LARYLGPKAE-E--PVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQR 442 (453)
T ss_dssp HHHHHCGGGG-C--CSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHH
T ss_pred HHHHhCccCC-C--ccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHH
Confidence 9999985211 1 112333334444443 221 23441 11234567789999999999987777899999999999
Q ss_pred HHHHHHHHH
Q 009198 514 CAQAIVQDY 522 (540)
Q Consensus 514 aA~~v~~~l 522 (540)
||++|++.+
T Consensus 443 aA~~i~~~l 451 (453)
T 2yg5_A 443 TAADIIARS 451 (453)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999999875
No 5
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=9.3e-35 Score=296.22 Aligned_cols=401 Identities=14% Similarity=0.187 Sum_probs=265.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeecc--CcccHHHHHHhcCCCcccc
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG--AYPNIQNLFGELGINDRLQ 135 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~--~~~~~~~l~~~lgl~~~~~ 135 (540)
+||+|||||++||+||++|+++|++|+|+|+++.+||++.++. .+|+.+|.|++.+.. ....+.++++++|+.....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 5999999999999999999999999999999999999999876 579999999866543 3456889999999864432
Q ss_pred cccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHHHH
Q 009198 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (540)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (540)
.......+.. .+.... ++. .. ..+...+..+....+...... ....+..++.+|+.+
T Consensus 80 ~~~~~~~~~~---~g~~~~--~~~--------~~------~~l~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~l~~ 136 (421)
T 3nrn_A 80 NSNPKGKILW---EGKIFH--YRE--------SW------KFLSVKEKAKALKLLAEIRMN----KLPKEEIPADEWIKE 136 (421)
T ss_dssp ECSSSCEEEE---TTEEEE--GGG--------GG------GGCC--------CCHHHHHTT----CCCCCCSBHHHHHHH
T ss_pred ECCCCeEEEE---CCEEEE--cCC--------ch------hhCCHhHHHHHHHHHHHHHhc----cCCCCCCCHHHHHHH
Confidence 2221111111 111111 000 00 011111111111111100000 011234789999998
Q ss_pred hCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhhhccCcceeeecCCCCccchhHHHHHHHHc
Q 009198 216 QVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSL 295 (540)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~ 295 (540)
. +++....+.++.++.....+.++.+++.......+..... .+. +.++.+| ++.+++.|.+.++++
T Consensus 137 ~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~~~~~gG-~~~l~~~l~~~~~~~ 202 (421)
T 3nrn_A 137 K----------IGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALR--WGG-PGLIRGG-CKAVIDELERIIMEN 202 (421)
T ss_dssp H----------TCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHH--HCS-CEEETTC-HHHHHHHHHHHHHTT
T ss_pred h----------cCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhh--cCC-cceecCC-HHHHHHHHHHHHHHC
Confidence 7 6777777778888877777888889988766655554322 122 3577777 899999999999999
Q ss_pred CcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEEEEEEecc
Q 009198 296 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDR 375 (540)
Q Consensus 296 G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~ 375 (540)
|++|+++++|++|.. +++++ | +.+|+++.||+||+|+|++.+.+|++....+..+.+++.++.+.+.+++++.+++
T Consensus 203 G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 278 (421)
T 3nrn_A 203 KGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPG 278 (421)
T ss_dssp TCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEES
T ss_pred CCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcC
Confidence 999999999999987 45554 5 4567789999999999999999999854455667788889999899999999998
Q ss_pred ccccccCcceeecCCceeEEeccCcccccccCCCccEEEEEeeccccccCCChHHHHHHHHHHHHHhCCCccccccccce
Q 009198 376 KLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAK 455 (540)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~ 455 (540)
+... ..++++..++-+..+...+..++.++|++.+++.+...- ...+.++..+.++++|.+++|. . .
T Consensus 279 ~~~~-~~~~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~----~~~~~~~~~~~~~~~L~~~~p~-~-------~ 345 (421)
T 3nrn_A 279 EPRI-GNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMAL----KNGNVKKAIEKGWEELLEIFPE-G-------E 345 (421)
T ss_dssp SCSS-CSSEEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEEC----TTCCHHHHHHHHHHHHHHHCTT-C-------E
T ss_pred Cccc-CCeEEEcCCcceeeEeccCCCCCCcCCCCceEEEEEEee----ccccHHHHHHHHHHHHHHHcCC-C-------e
Confidence 8533 234444332212223345667788888888776553321 1223346699999999999992 1 1
Q ss_pred EEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHH
Q 009198 456 IVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAI 518 (540)
Q Consensus 456 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v 518 (540)
++ .+.+|+.+++.+.+......+ .++ +|||+|||++.+.+..+|+||+.||++||++|
T Consensus 346 ~~--~~~~~~~~~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 346 PL--LAQVYRDGNPVNRTRAGLHIE--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp EE--EEEEC-------------CCC--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EE--EeeeccCCCCcccccCCCCCC--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 22 223344444433221111122 577 99999999998863235599999999999998
No 6
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2e-35 Score=308.21 Aligned_cols=432 Identities=20% Similarity=0.213 Sum_probs=218.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCc--cc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND--RL 134 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~--~~ 134 (540)
+++|||||||++||+||++|+++|++|+|||+++.+||++.++. .+|+.+|.|+|++... ..+.++++.+|.+. .+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~-~~~~~l~~~~g~~~~~~~ 78 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDP-SAIEELFALAGKQLKEYV 78 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCT-HHHHHHHHTTTCCGGGTC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCc-hhHHHHHHHhcchhhhce
Confidence 36899999999999999999999999999999999999999987 6899999999988643 24667778877542 22
Q ss_pred ccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhH-hcCcccccccCCC------
Q 009198 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAI-IGGQAYVEAQDGL------ 207 (540)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------ 207 (540)
.+.+.+..+.+....+.. +.+.. ....+...+..... ...+.++.+....... .............
T Consensus 79 ~~~~~~~~~~~~~~~g~~--~~~~~----~~~~~~~~l~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (501)
T 4dgk_A 79 ELLPVTPFYRLCWESGKV--FNYDN----DQTRLEAQIQQFNP-RDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDML 151 (501)
T ss_dssp CEEEESSSEEEEETTSCE--EEECS----CHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHH
T ss_pred eeEecCcceEEEcCCCCE--EEeec----cHHHHHHHHhhcCc-cccchhhhHHHHHHHhhhhhhhhccccccchhhhhh
Confidence 332222222111111111 11111 11111111110000 0000000000000000 0000000001112
Q ss_pred -------------CHHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhhhccCccee
Q 009198 208 -------------TVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMA 274 (540)
Q Consensus 208 -------------s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~ 274 (540)
++.+++.+. +.....+..+..... ..+..+...+..... ........ ...
T Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~-----------~~~~~l~~~l~~~~~-~~g~~p~~~~~~~~~---~~~~~~~~--G~~ 214 (501)
T 4dgk_A 152 RAAPQLAKLQAWRSVYSKVASY-----------IEDEHLRQAFSFHSL-LVGGNPFATSSIYTL---IHALEREW--GVW 214 (501)
T ss_dssp HSGGGTTTSHHHHHHHHHHHTT-----------CCCHHHHHHHHHHHH-HHHSCC--CCCTHHH---HHHHHSCC--CEE
T ss_pred hhhhhhhhhhhcccHHHHHHHH-----------hccHHHHhhhhhhhc-ccCCCcchhhhhhhh---hhhhhccC--CeE
Confidence 223333332 222222333322111 111223222222111 11122222 245
Q ss_pred eecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHH-HHhhcCCCCchhhH
Q 009198 275 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD-ILKLQLPENWKEMA 353 (540)
Q Consensus 275 ~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~-~~~~ll~~~~~~~~ 353 (540)
++.|| ++.++++|++.++++|++|+++++|++|.. +++++++|++.+|+++.||.||+++++. ++..|+++...+..
T Consensus 215 ~p~GG-~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~~ 292 (501)
T 4dgk_A 215 FPRGG-TGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAVK 292 (501)
T ss_dssp EETTH-HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC-----------------
T ss_pred EeCCC-CcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccchh
Confidence 78888 899999999999999999999999999998 6778889999999999999999988665 55677877665655
Q ss_pred HHHHHhccCCc-CeEEEEEEeccccccccC-cceeecC---------------CceeEEe-ccCcccccccCCCccEEEE
Q 009198 354 YFKRLEKLVGV-PVINIHIWFDRKLKNTYD-HLLFSRS---------------SLLSVYA-DMSLTCKEYYNPNQSMLEL 415 (540)
Q Consensus 354 ~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~-~~~~~~~---------------~~~~~~~-~~s~~~~~~~~~~~~~~~~ 415 (540)
..+.+++..+. +.+++++.++++...... .+.+..+ .-..++. .++..+++++|++.+.+.+
T Consensus 293 ~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~ 372 (501)
T 4dgk_A 293 QSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYV 372 (501)
T ss_dssp ----------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEE
T ss_pred hhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEE
Confidence 66666666654 578888999877532111 1112110 0112222 2345667889998876544
Q ss_pred -EeeccccccCC----ChHHHHHHHHHHHHHh-CCCccccccccceEEEEEEecCCCce-----------eccCCC---C
Q 009198 416 -VFAPAEEWISC----SDSEIIDATMKELAKL-FPDEISADQSKAKIVKYHVVKTPRSV-----------YKTIPN---C 475 (540)
Q Consensus 416 -~~~~~~~~~~~----~~e~~~~~v~~~l~~~-~p~~~~~~~~~~~~~~~~~~~~p~~~-----------~~~~~~---~ 475 (540)
+.++...+... ..+++.+++++.|++. +|+.. ..++ .....+|.++ |+..+. .
T Consensus 373 ~~~~p~~~~~~~~~~~~~~~~~~~vl~~l~~~~~P~~~------~~i~-~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~ 445 (501)
T 4dgk_A 373 LAPVPHLGTANLDWTVEGPKLRDRIFAYLEQHYMPGLR------SQLV-THRMFTPFDFRDQLNAYHGSAFSVEPVLTQS 445 (501)
T ss_dssp EEEECCTTTSCCCHHHHHHHHHHHHHHHHHHHTCTTHH------HHEE-EEEEECTTTTC--------------------
T ss_pred EEecCccccccccHHHHHHHHHHHHHHHHHHhhCCChH------HceE-EEEECCHHHHHHHcCCCCccccChhcchhhc
Confidence 34443333222 2467889999999875 57632 2343 4445566643 222221 1
Q ss_pred CCCCCCC-CCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhHH
Q 009198 476 EPCRPLQ-RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLL 525 (540)
Q Consensus 476 ~~~~~~~-~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~ 525 (540)
..++|.. .++++|||+||+++.++ +|++||+.||++||++|+++|...
T Consensus 446 ~~~RP~~~~t~i~gLyl~G~~t~pG--~Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 446 AWFRPHNRDKTITNLYLVGAGTHPG--AGIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp ----------CCTTEEECCCH--------HHHHHHHHHHHHHHHHHHHC--
T ss_pred cccCCCCCCCCCCCEEEECCCCCCc--ccHHHHHHHHHHHHHHHHHHhcCC
Confidence 2245544 47899999999999887 799999999999999999998653
No 7
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=3e-36 Score=312.15 Aligned_cols=422 Identities=18% Similarity=0.250 Sum_probs=278.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC------CceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAG------HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g------~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 130 (540)
++||+|||||++||+||++|+++| ++|+|||+++.+||++.+.. .+|+.+|.|++++...++.+.++++++|+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 83 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKKSAPQLVKDLGL 83 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCTHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCHHHHHHHHHcCC
Confidence 579999999999999999999999 99999999999999999876 58899999999998888899999999999
Q ss_pred CcccccccccceeecCCCCCCcccccCCC--CCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCC
Q 009198 131 NDRLQWKEHSMIFAMPNKPGEFSRFDFPE--VLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (540)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 208 (540)
+...........+... .+....+.... ..|.. +..++. ...+...++.+...... . ......+..+
T Consensus 84 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~p~~---~~~~~~-~~~~~~~~~~~~~~~~~---~---~~~~~~~~~s 151 (470)
T 3i6d_A 84 EHLLVNNATGQSYVLV--NRTLHPMPKGAVMGIPTK---IAPFVS-TGLFSLSGKARAAMDFI---L---PASKTKDDQS 151 (470)
T ss_dssp CTTEEECCCCCEEEEC--SSCEEECCC-------------------------CCSHHHHHHHH---S---CCCSSSSCCB
T ss_pred cceeecCCCCccEEEE--CCEEEECCCCcccCCcCc---hHHhhc-cCcCCHHHHHHHhcCcc---c---CCCCCCCCcC
Confidence 8654322111111111 11111111000 01110 111111 11111111111111111 0 1112345789
Q ss_pred HHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHH-------hhh--------------
Q 009198 209 VQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-------LQE-------------- 267 (540)
Q Consensus 209 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-------~~~-------------- 267 (540)
+.+|+.+. +.....+.++.++....+..++++++.......+..+ ...
T Consensus 152 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (470)
T 3i6d_A 152 LGEFFRRR-----------VGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLT 220 (470)
T ss_dssp HHHHHHHH-----------SCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------
T ss_pred HHHHHHHh-----------cCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhcccccccccc
Confidence 99999987 5677778888888888888888888876543321100 000
Q ss_pred -ccCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009198 268 -KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 346 (540)
Q Consensus 268 -~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~ 346 (540)
..+..+..+.+| ++.+++.|++.+.+ ++|+++++|++|+.+++ .+ .|++.+|+++.||+||+|+|++.+.++++
T Consensus 221 ~~~~~~~~~~~~g-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~-~~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~ 295 (470)
T 3i6d_A 221 AKKQGQFQTLSTG-LQTLVEEIEKQLKL--TKVYKGTKVTKLSHSGS-CY-SLELDNGVTLDADSVIVTAPHKAAAGMLS 295 (470)
T ss_dssp ------EEEETTC-THHHHHHHHHTCCS--EEEECSCCEEEEEECSS-SE-EEEESSSCEEEESEEEECSCHHHHHHHTT
T ss_pred ccCCceEEEeCCh-HHHHHHHHHHhcCC--CEEEeCCceEEEEEcCC-eE-EEEECCCCEEECCEEEECCCHHHHHHHcC
Confidence 002244556666 78888888877654 79999999999998444 44 58899998899999999999999999987
Q ss_pred CCchhhHHHHHHhccCCcCeEEEEEEecccccccc-Cc--ceeecC-Cc--eeEEeccCcccccccCCCccEEEEEeecc
Q 009198 347 ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DH--LLFSRS-SL--LSVYADMSLTCKEYYNPNQSMLELVFAPA 420 (540)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~-~~--~~~~~~-~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 420 (540)
++. ..+++.++.+.++.++++.|++++|+.. +. ++.+.. .. ....+ .+..++...|.+..++..++.+.
T Consensus 296 ~~~----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~-~s~~~~~~~p~~~~~l~~~~~~~ 370 (470)
T 3i6d_A 296 ELP----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTW-TNKKWPHAAPEGKTLLRAYVGKA 370 (470)
T ss_dssp TST----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEE-HHHHCGGGSCTTCEEEEEEECCS
T ss_pred Cch----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEE-EcCcCCCcCCCCCEEEEEEECCC
Confidence 652 2567888889999999999999998542 22 223322 21 12222 12234455666666665555332
Q ss_pred --ccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCC----CCCCCCCCCCCeEEecc
Q 009198 421 --EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGD 494 (540)
Q Consensus 421 --~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~ 494 (540)
..+..++++++++.++++|.+++|... .+..+...+|+++.+.+.++... ..+.+.++.+||||||+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-------~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~ 443 (470)
T 3i6d_A 371 GDESIVDLSDNDIINIVLEDLKKVMNING-------EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGA 443 (470)
T ss_dssp SCCGGGTSCHHHHHHHHHHHHGGGSCCCS-------CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECST
T ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCC-------CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEee
Confidence 346678999999999999999998631 12344566677776666666321 12223345789999999
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHH
Q 009198 495 YTKQKYLASMEGAVLSGKLCAQAIVQDY 522 (540)
Q Consensus 495 ~~~~~~~~~~~ga~~sg~~aA~~v~~~l 522 (540)
++.. .++++|+.||+++|++|++.|
T Consensus 444 ~~~g---~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 444 SFEG---VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp TTSC---CSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC---CCHHHHHHHHHHHHHHHHHHh
Confidence 8864 589999999999999999876
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=1.6e-35 Score=307.08 Aligned_cols=420 Identities=17% Similarity=0.228 Sum_probs=277.4
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCcc
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~ 133 (540)
....+||+|||||++||+||+.|++.|++|+|+|+++.+||++.++. .+|+.+|.|++++...++.+.++++++|++..
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGR 91 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcce
Confidence 35678999999999999999999999999999999999999999987 47899999999998777789999999998754
Q ss_pred ccccc---ccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHH
Q 009198 134 LQWKE---HSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (540)
Q Consensus 134 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (540)
+.... ....+.. .+.. +.+ +.. ...++.. ....+.+..+.+...... .....+..++.
T Consensus 92 ~~~~~~~~~~~~~~~---~g~~--~~~----p~~---~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~s~~ 152 (478)
T 2ivd_A 92 IRAADPAAKRRYVYT---RGRL--RSV----PAS---PPAFLAS-DILPLGARLRVAGELFSR------RAPEGVDESLA 152 (478)
T ss_dssp EECSCSSCCCEEEEE---TTEE--EEC----CCS---HHHHHTC-SSSCHHHHHHHHGGGGCC------CCCTTCCCBHH
T ss_pred eeecCccccceEEEE---CCEE--EEC----CCC---HHHhccC-CCCCHHHHHHHhhhhhcC------CCCCCCCCCHH
Confidence 33221 1111111 1111 111 111 1222221 233344444333222110 01124568999
Q ss_pred HHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhh----------------------hc
Q 009198 211 EWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ----------------------EK 268 (540)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~----------------------~~ 268 (540)
+|+++. +...+.+.++.++....++.++++++.......+..+.. ..
T Consensus 153 ~~l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (478)
T 2ivd_A 153 AFGRRH-----------LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAG 221 (478)
T ss_dssp HHHHHH-----------TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----C
T ss_pred HHHHHh-----------hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccc
Confidence 999987 667777888888888888888888887654333221100 01
Q ss_pred cC----cceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE---cCCcEEEcCEEEEccCHHHH
Q 009198 269 HG----SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 269 ~g----~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~---~~G~~i~a~~VI~A~~~~~~ 341 (540)
.+ ..+.++.+| +..+++.|++.+ |++|+++++|++|..++++ +.|++ .+|+++.||+||+|+|++.+
T Consensus 222 ~~~~~~~~~~~~~gG-~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~~v~~~~~~~g~~~~ad~vV~a~~~~~~ 295 (478)
T 2ivd_A 222 TAPKLSGALSTFDGG-LQVLIDALAASL---GDAAHVGARVEGLAREDGG--WRLIIEEHGRRAELSVAQVVLAAPAHAT 295 (478)
T ss_dssp CSCCCCCCEEEETTC-THHHHHHHHHHH---GGGEESSEEEEEEECC--C--CEEEEEETTEEEEEECSEEEECSCHHHH
T ss_pred ccccccccEEEECCC-HHHHHHHHHHHh---hhhEEcCCEEEEEEecCCe--EEEEEeecCCCceEEcCEEEECCCHHHH
Confidence 12 456677777 788999998877 5799999999999874443 35777 67778999999999999998
Q ss_pred hhcCCCCchhhHHHHHHhccCCcCeEEEEEEeccccccccCcc--eee---cCCceeEEeccCcccccccCCCccEEEEE
Q 009198 342 KLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHL--LFS---RSSLLSVYADMSLTCKEYYNPNQSMLELV 416 (540)
Q Consensus 342 ~~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~--~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 416 (540)
.+|+++ .+....+++.++.+.++.++++.|++++|+....+ +.. +.+...+.++ +...+...|.+..++..+
T Consensus 296 ~~ll~~--l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~~p~g~~~l~~~ 372 (478)
T 2ivd_A 296 AKLLRP--LDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHA-STTFPFRAEGGRVLYSCM 372 (478)
T ss_dssp HHHHTT--TCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEH-HHHCGGGBSTTCEEEEEE
T ss_pred HHHhhc--cCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEE-cccCCCcCCCCCEEEEEE
Confidence 988865 45566788889999999999999999987642222 221 1122233322 222334456666665544
Q ss_pred eecc--ccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCC----CCCCCCCCCCeE
Q 009198 417 FAPA--EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFY 490 (540)
Q Consensus 417 ~~~~--~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~l~ 490 (540)
.... ..|...+++++.+.+++.|.+++|.... +..+...+|+.+...+.++.... .+...+ .+|||
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~ 444 (478)
T 2ivd_A 373 VGGARQPGLVEQDEDALAALAREELKALAGVTAR-------PSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLH 444 (478)
T ss_dssp EECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSC-------CSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEE
T ss_pred eCCcCCccccCCCHHHHHHHHHHHHHHHhCCCCC-------CcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEE
Confidence 4322 3456778999999999999999986321 22234556666654444442110 011112 68999
Q ss_pred EecccccCCCCCchHHHHHHHHHHHHHHHHHHhH
Q 009198 491 LAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 491 ~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
|||+++.. .+|+||+.||+++|++|++.++.
T Consensus 445 ~aG~~~~g---~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 445 LIGNAYKG---VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp ECSTTTSC---CSHHHHHHHHHHHHHHHCC----
T ss_pred EEccCCCC---CCHHHHHHHHHHHHHHHHHhhcc
Confidence 99999743 58999999999999999887754
No 9
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=303.32 Aligned_cols=419 Identities=18% Similarity=0.178 Sum_probs=278.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCCCCCcceeeeccCCCCeeeccceeeccC---cccHHHHHHhcCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGA---YPNIQNLFGELGIN 131 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~---~~~~~~l~~~lgl~ 131 (540)
++||+|||||++||+||++|+++|+ +|+|||+++++||++.+....+|+.+|.|++++... +..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4699999999999999999999999 999999999999999987655799999999988653 55688999999998
Q ss_pred cccccccc------cceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccC
Q 009198 132 DRLQWKEH------SMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQD 205 (540)
Q Consensus 132 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (540)
........ ...... .+.... ++.... .+ ......+........+..+.. .....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~---~g~~~~--~p~~~~----~~---~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 142 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYV---GGALHA--LPTGLR----GL---LRPSPPFSKPLFWAGLRELTK-------PRGKEP 142 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEE---TTEEEE--CCCSSC----C------CCTTSCSCSSHHHHTTTTS-------CCCCSS
T ss_pred ceeeecCCCCchhcceEEEE---CCEEEE--CCCChh----hc---ccccchhhhHHHHHHHHhhhc-------CCCCCC
Confidence 65432110 001110 111111 111000 00 000000110011111111110 012235
Q ss_pred CCCHHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhhh------------------
Q 009198 206 GLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQE------------------ 267 (540)
Q Consensus 206 ~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~------------------ 267 (540)
+.++.+|+.+. ++..+.+.++.++....+..++++++.......+......
T Consensus 143 ~~s~~~~~~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~ 211 (477)
T 3nks_A 143 DETVHSFAQRR-----------LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQP 211 (477)
T ss_dssp CCBHHHHHHHH-----------HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CC
T ss_pred CcCHHHHHHHh-----------hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCC
Confidence 67999999987 5667778888888888888899998877664433221000
Q ss_pred ---------ccCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCH
Q 009198 268 ---------KHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPV 338 (540)
Q Consensus 268 ---------~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~ 338 (540)
..+..+.++.+| ++.+++.|++.+.+.|++|+++++|++|..++++ .+.|++.++ ++.||+||+|+|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~-~~~v~~~~~-~~~ad~vv~a~p~ 288 (477)
T 3nks_A 212 DSALIRQALAERWSQWSLRGG-LEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEG-RWKVSLRDS-SLEADHVISAIPA 288 (477)
T ss_dssp CCHHHHHHHHTTCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGG-CEEEECSSC-EEEESEEEECSCH
T ss_pred chhhhhhhcccCccEEEECCC-HHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCc-eEEEEECCe-EEEcCEEEECCCH
Confidence 012234566777 8999999999999999999999999999984444 345776554 7999999999999
Q ss_pred HHHhhcCCCCchhhHHHHHHhccCCcCeEEEEEEeccccccccC-cceee---cCCceeEEeccCccccccc-CCCccEE
Q 009198 339 DILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYD-HLLFS---RSSLLSVYADMSLTCKEYY-NPNQSML 413 (540)
Q Consensus 339 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~~~~~---~~~~~~~~~~~s~~~~~~~-~~~~~~~ 413 (540)
+.+.+|+++. +....+++.++.+.++.++++.|++++|+..+ +.+.. +.....+.++. ..++... +++..++
T Consensus 289 ~~~~~ll~~~--~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~~l 365 (477)
T 3nks_A 289 SVLSELLPAE--AAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIVYDS-VAFPEQDGSPPGLRV 365 (477)
T ss_dssp HHHHHHSCGG--GHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEECHH-HHCGGGSTTTTCEEE
T ss_pred HHHHHhcccc--CHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEEEec-cccCCCCCCCCceEE
Confidence 9999998764 33567788889999999999999999884321 22222 22333443332 2233332 3355666
Q ss_pred EEEeecc--ccc----cCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCC----CC
Q 009198 414 ELVFAPA--EEW----ISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPL----QR 483 (540)
Q Consensus 414 ~~~~~~~--~~~----~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~ 483 (540)
..++.+. ..+ ..++++++++.++++|.++++... .+..+.+.+|+++++.+.++....... ..
T Consensus 366 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~-------~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~ 438 (477)
T 3nks_A 366 TVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKE-------MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLT 438 (477)
T ss_dssp EEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS-------CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHH
T ss_pred EEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCC-------CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHH
Confidence 5544321 112 146899999999999999997521 133566778888888877764321111 11
Q ss_pred CCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHH
Q 009198 484 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 521 (540)
Q Consensus 484 ~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~ 521 (540)
...+|||+||+++.. .+|++|+.||+++|++|+++
T Consensus 439 ~~~~~l~l~G~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 439 AHRLPLTLAGASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp HTTCSEEECSTTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred hcCCCEEEEccCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 124689999999754 58999999999999999864
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=6e-35 Score=302.50 Aligned_cols=425 Identities=19% Similarity=0.245 Sum_probs=280.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC--CceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCccc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRL 134 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g--~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~ 134 (540)
++||+|||||++||++|++|++.| ++|+|+|+++.+||++.+.. .+|+.+|.|++++...+..+.++++++|++...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~~~~ 82 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKHILTDLIEAIGLGEKL 82 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTSTHHHHHHHHTTCGGGE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccHHHHHHHHHcCCcceE
Confidence 579999999999999999999999 99999999999999988876 578999999999988888999999999998654
Q ss_pred ccccccceeecCCCCCCcccccCC--CCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHH
Q 009198 135 QWKEHSMIFAMPNKPGEFSRFDFP--EVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (540)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (540)
........+... .+....+... ...|.. +..++. ...+...++. ....+... .........+..++.+|
T Consensus 83 ~~~~~~~~~~~~--~g~~~~~p~~~~~~~p~~---~~~~~~-~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~s~~~~ 153 (475)
T 3lov_A 83 VRNNTSQAFILD--TGGLHPIPKGAVMGIPTD---LDLFRQ-TTLLTEEEKQ-EVADLLLH--PSDSLRIPEQDIPLGEY 153 (475)
T ss_dssp EECCCCCEEEEE--TTEEEECCSSEETTEESC---HHHHTT-CSSSCHHHHH-HHHHHHHS--CCTTCCCCSSCCBHHHH
T ss_pred eecCCCceEEEE--CCEEEECCCcccccCcCc---hHHHhh-ccCCChhHHH-HhhCcccC--CcccccCCCCCcCHHHH
Confidence 432111111111 1111111100 001111 122222 2333443333 22111110 00111113457899999
Q ss_pred HHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHH-----------Hhhhc-------------
Q 009198 213 MRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR-----------FLQEK------------- 268 (540)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-----------~~~~~------------- 268 (540)
+.+. +...+.+.++.++....+..++++++.......+.. .....
T Consensus 154 l~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 222 (475)
T 3lov_A 154 LRPR-----------LGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTI 222 (475)
T ss_dssp HHHH-----------HCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC------------
T ss_pred HHHH-----------hCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccc
Confidence 9886 556777888889888888888888775432222111 00000
Q ss_pred -cCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCC
Q 009198 269 -HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE 347 (540)
Q Consensus 269 -~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~ 347 (540)
.+..+.++.+| +..+++.|++.+.+ ++|+++++|++|+.++ +.+ .|++.+| ++.||+||+|+|++.+.+|+++
T Consensus 223 ~~~~~~~~~~~G-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~-~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~ 296 (475)
T 3lov_A 223 KATGQFLSLETG-LESLIERLEEVLER--SEIRLETPLLAISRED-GRY-RLKTDHG-PEYADYVLLTIPHPQVVQLLPD 296 (475)
T ss_dssp --CCSEEEETTC-HHHHHHHHHHHCSS--CEEESSCCCCEEEEET-TEE-EEECTTC-CEEESEEEECSCHHHHHHHCTT
T ss_pred cCCCcEEeeCCh-HHHHHHHHHhhccC--CEEEcCCeeeEEEEeC-CEE-EEEECCC-eEECCEEEECCCHHHHHHHcCc
Confidence 13455667777 78888888887754 7999999999999744 433 5888999 7999999999999999999877
Q ss_pred CchhhHHHHHHhccCCcCeEEEEEEeccccccccCc--ceeecC-Cc--eeEEeccCcccccccCCCccEEEEEeec--c
Q 009198 348 NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDH--LLFSRS-SL--LSVYADMSLTCKEYYNPNQSMLELVFAP--A 420 (540)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~--~~~~~~-~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~ 420 (540)
+.. +++.++.+.++.++++.|+++++.+.+. ++.+.. +. ....+ .+..++...|. ..++..++.. .
T Consensus 297 ~~~-----~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~-~s~~~~~~~p~-~~~l~~~~~~~~~ 369 (475)
T 3lov_A 297 AHL-----PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTA-IDQKWNHSAPD-HTVLRAFVGRPGN 369 (475)
T ss_dssp SCC-----HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEE-HHHHCTTTCTT-EEEEEEEECBTTB
T ss_pred cCH-----HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEE-EcccCCCCCCC-cEEEEEEeCCCCC
Confidence 532 6778889999999999999988433333 222222 21 12222 12233444444 4444444432 2
Q ss_pred ccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCC----CCCCCCCCCCCeEEecccc
Q 009198 421 EEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEP----CRPLQRSPVEGFYLAGDYT 496 (540)
Q Consensus 421 ~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~l~~aG~~~ 496 (540)
..+..++++++++.++++|.+++|... .+....+.+|+.+.+.+.++... ..+.+.++.+||||||+++
T Consensus 370 ~~~~~~~~e~~~~~~~~~L~~~~g~~~-------~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~ 442 (475)
T 3lov_A 370 DHLVHESDEVLQQAVLQDLEKICGRTL-------EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAY 442 (475)
T ss_dssp CGGGGSCHHHHHHHHHHHHHHHHSSCC-------CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTT
T ss_pred CcccCCCHHHHHHHHHHHHHHHhCCCC-------CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCC
Confidence 445678999999999999999998531 12345566677776666666321 1222334678999999988
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHhHH
Q 009198 497 KQKYLASMEGAVLSGKLCAQAIVQDYVLL 525 (540)
Q Consensus 497 ~~~~~~~~~ga~~sg~~aA~~v~~~l~~~ 525 (540)
.. .+|++|+.||+++|++|++.++..
T Consensus 443 ~g---~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 443 DG---VGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp SC---SSHHHHHHHHHHHHHHHHHTC---
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence 65 589999999999999999987654
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2.7e-35 Score=307.50 Aligned_cols=430 Identities=17% Similarity=0.180 Sum_probs=273.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCcccc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDRLQ 135 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~ 135 (540)
..+||+|||||++||+||+.|++.|++|+|+|+++.+||++.+.. .+|+.+|.|++++...++.+.++++++|+.....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~ 90 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQ 90 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCcccce
Confidence 468999999999999999999999999999999999999998876 5789999999999877788999999999876543
Q ss_pred cccccc-eeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHHH
Q 009198 136 WKEHSM-IFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (540)
Q Consensus 136 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (540)
+..... .+... .+... . .+... ..+.. ...+.+.++.+.+........ ........+..++.+|++
T Consensus 91 ~~~~~~~~~~~~--~g~~~--~----~p~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~l~ 157 (504)
T 1sez_A 91 FPLSQNKRYIAR--NGTPV--L----LPSNP---IDLIK-SNFLSTGSKLQMLLEPILWKN-KKLSQVSDSHESVSGFFQ 157 (504)
T ss_dssp CCSSCCCEEEES--SSSEE--E----CCSSH---HHHHH-SSSSCHHHHHHHHTHHHHC-----------CCCBHHHHHH
T ss_pred eccCCCceEEEE--CCeEE--E----CCCCH---HHHhc-cccCCHHHHHHHhHhhhccCc-ccccccCCCCccHHHHHH
Confidence 322111 11111 11111 1 11111 11221 123333333333221110000 000001134589999998
Q ss_pred HhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHH---------------hhhc-----------
Q 009198 215 KQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF---------------LQEK----------- 268 (540)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~---------------~~~~----------- 268 (540)
++ ++..+.+.++.++....++.++++++.......+... +...
T Consensus 158 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (504)
T 1sez_A 158 RH-----------FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTS 226 (504)
T ss_dssp HH-----------HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCC
T ss_pred HH-----------cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchh
Confidence 87 5667778888888888888888888875443222111 0000
Q ss_pred ----cCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCc----EEEEEEc--CC---cEEEcCEEEEc
Q 009198 269 ----HGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGT----VKNFLLT--NG---NVIDGDAYVFA 335 (540)
Q Consensus 269 ----~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~----~~~V~~~--~G---~~i~a~~VI~A 335 (540)
......++.|| ++.+++.|++.+.+ ++|+++++|++|..++++. .+.|++. +| +++.||+||+|
T Consensus 227 ~~~~~~~~~~~~~GG-~~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a 303 (504)
T 1sez_A 227 ANKKRQRGSFSFLGG-MQTLTDAICKDLRE--DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMT 303 (504)
T ss_dssp SCCSTTCSCBEETTC-THHHHHHHHTTSCT--TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEEC
T ss_pred hccccCCceEeeCcH-HHHHHHHHHhhccc--ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEEC
Confidence 01124456666 78888888765421 7899999999999855542 1345554 45 57899999999
Q ss_pred cCHHHHhhcCCC---CchhhHHHHHHhccCCcCeEEEEEEeccccccc-cCc--ceeec-C-----CceeEEeccCcccc
Q 009198 336 TPVDILKLQLPE---NWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNT-YDH--LLFSR-S-----SLLSVYADMSLTCK 403 (540)
Q Consensus 336 ~~~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~-~~~--~~~~~-~-----~~~~~~~~~s~~~~ 403 (540)
+|+..+.+++++ ...+.. .+.++.+.++.++++.|++++|+. ... +++.. + .+....+ .+..++
T Consensus 304 ~p~~~l~~ll~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~-~s~~~~ 379 (504)
T 1sez_A 304 APLCDVKSMKIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLF-SSMMFP 379 (504)
T ss_dssp SCHHHHHTSEEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEE-HHHHCG
T ss_pred CCHHHHHHHhhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEe-eccccC
Confidence 999999998731 111211 256677778999999999998853 222 22221 1 2222222 123445
Q ss_pred cccCCCccEEEEEeec--cccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCC--
Q 009198 404 EYYNPNQSMLELVFAP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR-- 479 (540)
Q Consensus 404 ~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-- 479 (540)
...|.+..++..+..+ ...|..++++++++.++++|++++|.... +......+|+.+++.+.+++....
T Consensus 380 ~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~-------p~~~~~~~w~~~~p~~~~g~~~~~~~ 452 (504)
T 1sez_A 380 DRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGE-------PTYVNHLYWSKAFPLYGHNYDSVLDA 452 (504)
T ss_dssp GGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSC-------CSSEEEEEEEEEEECCCTTHHHHHHH
T ss_pred CcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCC-------CeEEEEeECCCCCCccCcCHHHHHHH
Confidence 5566666665443332 24577889999999999999999986321 122334455556555555532111
Q ss_pred -CCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhHHHh
Q 009198 480 -PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAA 527 (540)
Q Consensus 480 -~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~~~ 527 (540)
....++.+||||||+++.. .++++|+.||++||++|+++++....
T Consensus 453 ~~~~~~~~~~l~~aG~~~~g---~~v~gai~sG~~aA~~il~~l~~~~~ 498 (504)
T 1sez_A 453 IDKMEKNLPGLFYAGNHRGG---LSVGKALSSGCNAADLVISYLESVST 498 (504)
T ss_dssp HHHHHHHSTTEEECCSSSSC---SSHHHHHHHHHHHHHHHHHHHSSCC-
T ss_pred HHHHHHhCCCEEEEeecCCC---CCHHHHHHHHHHHHHHHHHHHhhccc
Confidence 1123467899999999863 69999999999999999998876543
No 12
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=6.4e-34 Score=297.93 Aligned_cols=422 Identities=15% Similarity=0.192 Sum_probs=269.7
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHC-CCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCc
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 132 (540)
++.++||||||||++||+||++|+++ |++|+|||+++++||++.++...+|+.+|.|+|++...++.+.+++++++...
T Consensus 7 p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 7 PDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYKYFDDCLDEALPKE 86 (513)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBHHHHHHHHHHSCSG
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCHHHHHHHHHhCCcc
Confidence 45678999999999999999999984 99999999999999999886557899999999999988889999999987654
Q ss_pred cc-ccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHH
Q 009198 133 RL-QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQE 211 (540)
Q Consensus 133 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (540)
.. ........... .+++..+.+... ..........+....+..... ..........++.+
T Consensus 87 ~~~~~~~~~~~i~~---~g~~~~~p~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~ 147 (513)
T 4gde_A 87 DDWYTHQRISYVRC---QGQWVPYPFQNN--------------ISMLPKEEQVKCIDGMIDAAL--EARVANTKPKTFDE 147 (513)
T ss_dssp GGEEEEECCEEEEE---TTEEEESSGGGG--------------GGGSCHHHHHHHHHHHHHHHH--HHHTCCSCCCSHHH
T ss_pred ceeEEecCceEEEE---CCeEeecchhhh--------------hhhcchhhHHHHHHHHHHHHH--hhhcccccccCHHH
Confidence 21 11111111111 112111111000 001111111111111111110 01112234578999
Q ss_pred HHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHH---------HHHHHh-hh---c--cCcceeee
Q 009198 212 WMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILI---------ALNRFL-QE---K--HGSKMAFL 276 (540)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~---------~~~~~~-~~---~--~g~~~~~~ 276 (540)
|+.+. +...+.+.++.++....++.++++++..+... .....+ .. . ......++
T Consensus 148 ~~~~~-----------~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (513)
T 4gde_A 148 WIVRM-----------MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFP 216 (513)
T ss_dssp HHHHH-----------HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEE
T ss_pred HHHHh-----------hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeec
Confidence 99887 56667788888888888777777765432211 111111 10 1 11223344
Q ss_pred -cCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHH
Q 009198 277 -DGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYF 355 (540)
Q Consensus 277 -~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~ 355 (540)
.|| ++.++++|++.+.+.|++|+++++|++|.. +++. |++.+|+++.||+||+|+|...+.+++++. ...
T Consensus 217 ~~gG-~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~-~~~~---v~~~~G~~~~ad~vI~t~P~~~l~~~l~~~----~~~ 287 (513)
T 4gde_A 217 ARGG-TGGIWIAVANTLPKEKTRFGEKGKVTKVNA-NNKT---VTLQDGTTIGYKKLVSTMAVDFLAEAMNDQ----ELV 287 (513)
T ss_dssp SSSH-HHHHHHHHHHTSCGGGEEESGGGCEEEEET-TTTE---EEETTSCEEEEEEEEECSCHHHHHHHTTCH----HHH
T ss_pred ccCC-HHHHHHHHHHHHHhcCeeeecceEEEEEEc-cCCE---EEEcCCCEEECCEEEECCCHHHHHHhcCch----hhH
Confidence 455 899999999999999999999999999986 4442 668899999999999999999999998753 344
Q ss_pred HHHhccCCcCeEEEEEEecccccccc---CcceeecCCc-eeEEeccCcc---------------------cccccCCCc
Q 009198 356 KRLEKLVGVPVINIHIWFDRKLKNTY---DHLLFSRSSL-LSVYADMSLT---------------------CKEYYNPNQ 410 (540)
Q Consensus 356 ~~~~~~~~~~~~~i~l~~~~~~~~~~---~~~~~~~~~~-~~~~~~~s~~---------------------~~~~~~~~~ 410 (540)
.+...+.|.++..|.+.++....... ..+.+.+..+ ......+++. ++...+.+.
T Consensus 288 ~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 367 (513)
T 4gde_A 288 GLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKE 367 (513)
T ss_dssp HHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEEC
T ss_pred hhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCc
Confidence 56678888888889998887643221 1111111111 0001111111 112222222
Q ss_pred cEEEEEee--ccccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCC----CCCCCC
Q 009198 411 SMLELVFA--PAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRS 484 (540)
Q Consensus 411 ~~~~~~~~--~~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~ 484 (540)
.++...+. ...+...+++|++++.++++|.++.+... ...++...+.+||++.+.+..+.... ++.+..
T Consensus 368 ~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~-----~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~ 442 (513)
T 4gde_A 368 GPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKP-----TDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD 442 (513)
T ss_dssp CCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCT-----TCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH
T ss_pred ceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCC-----ccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh
Confidence 22222111 12334477899999999999999986432 23577788889999987776663221 121222
Q ss_pred CCCCeEEecccccCCCC-CchHHHHHHHHHHHHHHHHH
Q 009198 485 PVEGFYLAGDYTKQKYL-ASMEGAVLSGKLCAQAIVQD 521 (540)
Q Consensus 485 ~~~~l~~aG~~~~~~~~-~~~~ga~~sg~~aA~~v~~~ 521 (540)
+|||++|......|. ++|++|+++|+.||+.|++.
T Consensus 443 --~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 443 --KDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp --TTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred --cCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 599999988777765 58999999999999999963
No 13
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=3.5e-30 Score=263.42 Aligned_cols=412 Identities=17% Similarity=0.178 Sum_probs=248.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeecc--CCCCeeeccceeeccC-cccHHHHHHhcCCCccc
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD--GDGDWYETGLHIFFGA-YPNIQNLFGELGINDRL 134 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~--~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 134 (540)
+||+|||||++|++||+.|++.|++|+|||+++++||++.+... ..|..++.|++++... +..+.++++++|++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTAA 81 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeeee
Confidence 69999999999999999999999999999999999999987542 2388999999999877 77788899999987543
Q ss_pred ccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHHH
Q 009198 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (540)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (540)
........+... .+.+... ++. .......+...+. ........+.+............+ .++.+|+.
T Consensus 82 ~~~~~~~~~~~~--~~~~~~~-~~~-~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l~ 148 (431)
T 3k7m_X 82 ASEFTSFRHRLG--PTAVDQA-FPI-PGSEAVAVEAATY--------TLLRDAHRIDLEKGLENQDLEDLD-IPLNEYVD 148 (431)
T ss_dssp CCCCCEECCBSC--TTCCSSS-SCC-CGGGHHHHHHHHH--------HHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHHH
T ss_pred cCCCCcEEEEec--CCeecCC-CCC-CHHHHHHHHHHHH--------HHHHHHHhcCCCCCccCcchhhhc-CCHHHHHH
Confidence 221111111000 0111000 000 0001111110000 000000000000000001122334 78899998
Q ss_pred HhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhh---h-ccCcceeeecCCCCccchhHHHH
Q 009198 215 KQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ---E-KHGSKMAFLDGNPPERLCLPIVE 290 (540)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~---~-~~g~~~~~~~gg~~~~l~~~l~~ 290 (540)
.. +.... ...++........+.+.++++.......+...-. . ...... .+.++ ...+++.++
T Consensus 149 ~~----------~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~~l~~~~~- 214 (431)
T 3k7m_X 149 KL----------DLPPV-SRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDE-VFSNG-SADLVDAMS- 214 (431)
T ss_dssp HH----------TCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCE-EETTC-THHHHHHHH-
T ss_pred hc----------CCCHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhh-hcCCc-HHHHHHHHH-
Confidence 87 44443 3344555555566677777877665543322100 0 001111 23333 333333332
Q ss_pred HHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEEEE
Q 009198 291 HIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIH 370 (540)
Q Consensus 291 ~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~ 370 (540)
++.| +|+++++|++|+.+ ++.+ .|++.+|+++.||+||+|+|...+..+.-.+.++....+++....+....+|+
T Consensus 215 --~~~g-~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~ 289 (431)
T 3k7m_X 215 --QEIP-EIRLQTVVTGIDQS-GDVV-NVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKIL 289 (431)
T ss_dssp --TTCS-CEESSCCEEEEECS-SSSE-EEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEE
T ss_pred --hhCC-ceEeCCEEEEEEEc-CCeE-EEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEE
Confidence 3346 99999999999874 4444 48899997799999999999999888753344566677788888888899999
Q ss_pred EEeccccccccCcceeecCCceeEEeccCcccccccC-CCccEEEEEeeccccccCCChHHHHHHHHHHHHHhCCCcccc
Q 009198 371 IWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYN-PNQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFPDEISA 449 (540)
Q Consensus 371 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~ 449 (540)
+.|+++++. +....++.....++. ... .+..++..+..+.. +... ++ +.+.+.|++++|+. .
T Consensus 290 ~~~~~~~~~----i~~~~d~~~~~~~~~------~~~~~~~~~l~~~~~g~~-~~~~-~~---~~~~~~l~~~~~~~-~- 352 (431)
T 3k7m_X 290 IHVRGAEAG----IECVGDGIFPTLYDY------CEVSESERLLVAFTDSGS-FDPT-DI---GAVKDAVLYYLPEV-E- 352 (431)
T ss_dssp EEEESCCTT----EEEEBSSSSSEEEEE------EECSSSEEEEEEEEETTT-CCTT-CH---HHHHHHHHHHCTTC-E-
T ss_pred EEECCCCcC----ceEcCCCCEEEEEeC------cCCCCCCeEEEEEecccc-CCCC-CH---HHHHHHHHHhcCCC-C-
Confidence 999988742 222333322222111 111 23334433333222 4322 22 34667888888862 1
Q ss_pred ccccceEEEEEEecCCCc--eecc-CCCC-CCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHH
Q 009198 450 DQSKAKIVKYHVVKTPRS--VYKT-IPNC-EPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 521 (540)
Q Consensus 450 ~~~~~~~~~~~~~~~p~~--~~~~-~~~~-~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~ 521 (540)
........|...|++ .|.+ .|+. ....+.+++|.+||||||++++..|+++|+||++||+|||++|+..
T Consensus 353 ---~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 353 ---VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp ---EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred ---ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 122334567777764 3433 3443 3456777889999999999999888999999999999999999864
No 14
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=5.9e-32 Score=279.44 Aligned_cols=426 Identities=18% Similarity=0.199 Sum_probs=250.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCCCCcceeeeccCCCCeeeccceeecc----CcccHHHHHHh-cC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFG----AYPNIQNLFGE-LG 129 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~----~~~~~~~l~~~-lg 129 (540)
..+||+|||||++|+++|+.|++.|+ +|+|+|+++.+||++.+.. ..|..+|.|++++.+ ....+.+++++ +|
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~-~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lg 81 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTN-FAGINVELGANWVEGVNGGKMNPIWPIVNSTLK 81 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEE-ETTEEEESSCCEEEEESSSSCCTHHHHHHTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecc-cCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcC
Confidence 46799999999999999999999998 8999999999999998876 578899999999973 33458899999 89
Q ss_pred CCccccc-ccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCC
Q 009198 130 INDRLQW-KEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLT 208 (540)
Q Consensus 130 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 208 (540)
+...... ......... ..+.. .+ .......+... .+.......+...+ .. ...+..+
T Consensus 82 l~~~~~~~~~~~~~~~~--~~g~~--------~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~--~~~~~~s 139 (472)
T 1b37_A 82 LRNFRSDFDYLAQNVYK--EDGGV--------YD--EDYVQKRIELA-----DSVEEMGEKLSATL---HA--SGRDDMS 139 (472)
T ss_dssp CCEEECCCTTGGGCEEC--SSSSB--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHTS---CT--TCTTCCB
T ss_pred CceeeccCccccceeEc--CCCCC--------CC--HHHHHHHHHHH-----HHHHHHHHHHHHhh---cc--ccchhhh
Confidence 8753211 010000000 01111 01 11111111100 00000000000000 00 1123344
Q ss_pred HHH--HHHHhCCCchhhhhcCCChHHHHHHHHHHHhh-ccCCCCccchHHHHHHHHHHHhhhccCcceee-ecCCCCccc
Q 009198 209 VQE--WMRKQVQPSDLVRELGVPDRVTTEVFIAMSKA-LNFINPDELSMQCILIALNRFLQEKHGSKMAF-LDGNPPERL 284 (540)
Q Consensus 209 ~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~~-~~gg~~~~l 284 (540)
+.. ++.+.... ......+.++..+... ....+++..+...... ...+.. ..+..+.. ..+| ++.+
T Consensus 140 ~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~~~~~~-~~~~~~~~~~~gG-~~~l 208 (472)
T 1b37_A 140 ILAMQRLNEHQPN--------GPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVP-LATFSD-FGDDVYFVADQRG-YEAV 208 (472)
T ss_dssp HHHHHHHHHTSSS--------SCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSS-CHHHHH-HCSEEEEECCTTC-TTHH
T ss_pred HHHHHHHhhhccc--------ccccHHHHHHHHHHHhhhhcccccccchhhccc-cccccc-cCCceeeeecCCc-HHHH
Confidence 432 44433100 0111112223332211 1122333333211100 000111 11112222 2455 7899
Q ss_pred hhHHHHHHHHc--------CcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC--CCchhhHH
Q 009198 285 CLPIVEHIQSL--------GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP--ENWKEMAY 354 (540)
Q Consensus 285 ~~~l~~~l~~~--------G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~--~~~~~~~~ 354 (540)
++.|.+.+.+. |++|+++++|++|... ++.+ .|++.+|+++.||+||+|+|+..+..++. .+.++...
T Consensus 209 ~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~ 286 (472)
T 1b37_A 209 VYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGV-TVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWK 286 (472)
T ss_dssp HHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCE-EEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHH
T ss_pred HHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcE-EEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHH
Confidence 99999888765 6899999999999984 4445 48899998899999999999999887652 23456677
Q ss_pred HHHHhccCCcCeEEEEEEecccccccc-Cc--ceeecC--CceeEEeccCcccccccCCCccEEEEEeecc--ccccCCC
Q 009198 355 FKRLEKLVGVPVINIHIWFDRKLKNTY-DH--LLFSRS--SLLSVYADMSLTCKEYYNPNQSMLELVFAPA--EEWISCS 427 (540)
Q Consensus 355 ~~~~~~~~~~~~~~i~l~~~~~~~~~~-~~--~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 427 (540)
.++++++.+.++.||++.|++++|+.. +. +++... .+...+.... ... ++..++..++.+. ..|..++
T Consensus 287 ~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-p~~~~l~~~~~~~~a~~~~~~~ 361 (472)
T 1b37_A 287 VRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFE----KQY-PDANVLLVTVTDEESRRIEQQS 361 (472)
T ss_dssp HHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECT----TTS-TTCCEEEEEEEHHHHHHHHTSC
T ss_pred HHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeeccc----CCC-CCCCEEEEEechHHHHHHHhCC
Confidence 888888888899999999999999752 11 122211 1111111111 112 2444554444322 4577789
Q ss_pred hHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCC--ceec-cCCCCCC-CCCCCCCCCCCeEEecccccCCCCCc
Q 009198 428 DSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPR--SVYK-TIPNCEP-CRPLQRSPVEGFYLAGDYTKQKYLAS 503 (540)
Q Consensus 428 ~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~--~~~~-~~~~~~~-~~~~~~~~~~~l~~aG~~~~~~~~~~ 503 (540)
++++++.++++|++++|+...+++ .......|...|+ +.|. +.++... ..+..++|++||||||+++++.+.++
T Consensus 362 ~~e~~~~~l~~L~~~~Pg~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~ 439 (472)
T 1b37_A 362 DEQTKAEIMQVLRKMFPGKDVPDA--TDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGY 439 (472)
T ss_dssp HHHHHHHHHHHHHHHCTTSCCCCC--SEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTS
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCC--ceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCc
Confidence 999999999999999976321211 1222233433354 3333 2344321 23446788999999999999877789
Q ss_pred hHHHHHHHHHHHHHHHHHHhH
Q 009198 504 MEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 504 ~~ga~~sg~~aA~~v~~~l~~ 524 (540)
|+||+.||++||++|++.++.
T Consensus 440 v~GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 440 VHGAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998753
No 15
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=5e-31 Score=274.63 Aligned_cols=429 Identities=16% Similarity=0.123 Sum_probs=256.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeecc-CCCCeeeccceeeccCcccHHHHHHhcCCCcc
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKD-GDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~-~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~ 133 (540)
...+||+|||||++||++|+.|++.|++|+|+|+++++||++.++.. ..+..+|.|++++......+.++++++|++..
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 110 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLN 110 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCce
Confidence 45679999999999999999999999999999999999999877653 35788999999998777778999999998642
Q ss_pred cccc-cccceeecCCCCCCc-------ccccCCCCCCCchhHHHHhhhcCCCCChhHHHHh-hhchhhhHhc--Cccccc
Q 009198 134 LQWK-EHSMIFAMPNKPGEF-------SRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKF-AIGLLPAIIG--GQAYVE 202 (540)
Q Consensus 134 ~~~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~ 202 (540)
.... .....+......... ..+.+.- .+.. ......+.... .....+.... ......
T Consensus 111 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (498)
T 2iid_A 111 EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPV-KPSE-----------AGKSAGQLYEESLGKVVEELKRTNCSYILN 178 (498)
T ss_dssp EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCC-CGGG-----------TTCCHHHHHHHHTHHHHHHHHHSCHHHHHH
T ss_pred eecccCCccEEEeCCeeecccccccCccccccCC-Cccc-----------cCCCHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 1110 011111110000000 0000000 0000 00000000000 0000000000 000112
Q ss_pred ccCCCCHHHHHHHhCCCchhhhhcC-CChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhhhccCcceeeecCCCC
Q 009198 203 AQDGLTVQEWMRKQVQPSDLVRELG-VPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPP 281 (540)
Q Consensus 203 ~~~~~s~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~gg~~ 281 (540)
..+..++.+|+... + ++....+ .+..+........ .+.......... + ..+..+..+.|| +
T Consensus 179 ~~~~~s~~~~l~~~----------~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~-~--~~~~~~~~~~gG-~ 240 (498)
T 2iid_A 179 KYDTYSTKEYLIKE----------GDLSPGAVD-MIGDLLNEDSGYY---VSFIESLKHDDI-F--AYEKRFDEIVDG-M 240 (498)
T ss_dssp HHTTSBHHHHHHHT----------SCCCHHHHH-HHHHHTTCGGGTT---SBHHHHHHHHHH-H--TTCCCEEEETTC-T
T ss_pred HhhhhhHHHHHHHc----------cCCCHHHHH-HHHHhcCcccchh---HHHHHHHHHHhc-c--ccCcceEEeCCc-H
Confidence 23457888888876 3 2322211 2222211110000 111111111111 1 123345567777 7
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc----EEEcCEEEEccCHHHHhhcCCCCchhhHHHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVDILKLQLPENWKEMAYFKR 357 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~----~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~ 357 (540)
+.+++.|++.+.+ +|+++++|++|..+ ++.+ .|++.+|+ ++.||+||+|+|...+..+...+.+|....++
T Consensus 241 ~~l~~~l~~~l~~---~i~~~~~V~~I~~~-~~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp~~~~~a 315 (498)
T 2iid_A 241 DKLPTAMYRDIQD---KVHFNAQVIKIQQN-DQKV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLLPKKAHA 315 (498)
T ss_dssp THHHHHHHHHTGG---GEESSCEEEEEEEC-SSCE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCCHHHHHH
T ss_pred HHHHHHHHHhccc---ccccCCEEEEEEEC-CCeE-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCCHHHHHH
Confidence 8999999988754 79999999999984 4444 57777764 58999999999999888775333467777889
Q ss_pred HhccCCcCeEEEEEEeccccccccC---cceeecCCceeEEeccCcccccccCCCccEEEEEeec--cccccCCChHHHH
Q 009198 358 LEKLVGVPVINIHIWFDRKLKNTYD---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP--AEEWISCSDSEII 432 (540)
Q Consensus 358 ~~~~~~~~~~~i~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~ 432 (540)
++++.+.++.||++.|++++|+..+ ...+.+.+...+++ .+. ..|.+..++..+..+ ...|..++++++.
T Consensus 316 i~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~s~----~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~ 390 (498)
T 2iid_A 316 LRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYY-PNH----NFTNGVGVIIAYGIGDDANFFQALDFKDCA 390 (498)
T ss_dssp HHHCCEECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEEC-CSS----CCTTSCEEEEEEEEHHHHHTTTTSCHHHHH
T ss_pred HHhCCCcceeEEEEEeCCCCccCCCccCCcccCCCCcceEEE-CCC----CCCCCCcEEEEEeCCccHhhhhcCCHHHHH
Confidence 9999999999999999999997532 22233334333332 111 124444455443322 2567788999999
Q ss_pred HHHHHHHHHhCCCcccccc-ccceEEEEEEecCCCce--ecc-CCCCC-CCCCCCCCCCCCeEEecccccCCCCCchHHH
Q 009198 433 DATMKELAKLFPDEISADQ-SKAKIVKYHVVKTPRSV--YKT-IPNCE-PCRPLQRSPVEGFYLAGDYTKQKYLASMEGA 507 (540)
Q Consensus 433 ~~v~~~l~~~~p~~~~~~~-~~~~~~~~~~~~~p~~~--~~~-~~~~~-~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga 507 (540)
+.++++|.+++|....... .........|...|++. |.+ .|+.. ...+...++.+||||||++++..+ ++|+||
T Consensus 391 ~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~-g~~~GA 469 (498)
T 2iid_A 391 DIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH-GWIDST 469 (498)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS-SCHHHH
T ss_pred HHHHHHHHHHcCCChhhhhhhcCccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC-cCHHHH
Confidence 9999999999973211000 00123445666666643 322 22211 122334567899999999997654 799999
Q ss_pred HHHHHHHHHHHHHHHhH
Q 009198 508 VLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 508 ~~sg~~aA~~v~~~l~~ 524 (540)
+.||++||++|++.+..
T Consensus 470 i~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 470 IKSGLRAARDVNLASEN 486 (498)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999998864
No 16
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=6.6e-32 Score=281.99 Aligned_cols=426 Identities=15% Similarity=0.166 Sum_probs=238.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-CceEEEecCCCCCcceeeeccCCCCeeeccceeeccCc-ccHHHHHHhcCCCcc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAY-PNIQNLFGELGINDR 133 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~-~~~~~l~~~lgl~~~ 133 (540)
..+||+|||||++||+||+.|++.| ++|+|||+++++||++.+....+|+.+|.|++++.+.. ..+..++.++|+...
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~~~~~~~~~~lg~~~~ 86 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLTNPLFLEEAQLSLNDG 86 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTTCHHHHHHHHHHHHHC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCCChHHHHHHHhCCCCc
Confidence 4579999999999999999999999 99999999999999998876337899999999998653 346667777775321
Q ss_pred ---cccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHH
Q 009198 134 ---LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQ 210 (540)
Q Consensus 134 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 210 (540)
..+....... +..... .. ...... .+....+.+..+..... . .....++.++.
T Consensus 87 ~~~~~~~~~~~~~-~~~~~~---~~--~~~~~~---------------~~~~~~~~~~~~~~~~~--~-~~~~~~d~s~~ 142 (516)
T 1rsg_A 87 RTRFVFDDDNFIY-IDEERG---RV--DHDKEL---------------LLEIVDNEMSKFAELEF--H-QHLGVSDCSFF 142 (516)
T ss_dssp CCCEECCCCCCEE-EETTTE---EC--TTCTTT---------------CHHHHHHHHHHHHHHHC----------CCBHH
T ss_pred ceeEEECCCCEEE-EcCCCc---cc--cccHHH---------------HHHHHHHHHHHHHHHHh--h-hccCCCCCCHH
Confidence 1111111111 000000 00 000000 00000111111100000 0 00112356788
Q ss_pred HHHHHhCCCchhhhhcCCChHHHHHHHHHHHh---hccCCCCccchHHHHHHHHHHHhhhccCcceeeecCCCCccchhH
Q 009198 211 EWMRKQVQPSDLVRELGVPDRVTTEVFIAMSK---ALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLP 287 (540)
Q Consensus 211 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~ 287 (540)
+|+.+..... . ..+... ....+..+.. ...+..++.++.... +....+. ..++.+ ++.+++.
T Consensus 143 ~~l~~~l~~~--~--~~l~~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~-------~~~~~~~-~~~~~g--~~~l~~~ 207 (516)
T 1rsg_A 143 QLVMKYLLQR--R--QFLTND-QIRYLPQLCRYLELWHGLDWKLLSAKDT-------YFGHQGR-NAFALN--YDSVVQR 207 (516)
T ss_dssp HHHHHHHHHH--G--GGSCHH-HHHHHHHHHGGGHHHHTBCTTTSBHHHH-------CCCCSSC-CEEESC--HHHHHHH
T ss_pred HHHHHHHHHh--h--cccCHH-HHHHHHHHHHHHHHHhCCChHHCChHHH-------HhhccCc-chhhhC--HHHHHHH
Confidence 8776541000 0 001111 1112222221 112344555654432 1111222 234433 4556555
Q ss_pred HHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhc-----------CCCCchhhHHHH
Q 009198 288 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ-----------LPENWKEMAYFK 356 (540)
Q Consensus 288 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~l-----------l~~~~~~~~~~~ 356 (540)
|++.+. +++|++|++|++|...+++. +.|++.+|+++.||+||+|+|+..+... .-.+.+|....+
T Consensus 208 l~~~l~--~~~i~~~~~V~~I~~~~~~~-v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ 284 (516)
T 1rsg_A 208 IAQSFP--QNWLKLSCEVKSITREPSKN-VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQD 284 (516)
T ss_dssp HHTTSC--GGGEETTCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHH
T ss_pred HHHhCC--CCEEEECCEEEEEEEcCCCe-EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHH
Confidence 555443 25799999999999742333 4689999988999999999999988632 111235667889
Q ss_pred HHhccCCcCeEEEEEEecccccccc-CcceeecC---CceeEEeccC---------------------ccc--c-----c
Q 009198 357 RLEKLVGVPVINIHIWFDRKLKNTY-DHLLFSRS---SLLSVYADMS---------------------LTC--K-----E 404 (540)
Q Consensus 357 ~~~~~~~~~~~~i~l~~~~~~~~~~-~~~~~~~~---~~~~~~~~~s---------------------~~~--~-----~ 404 (540)
+++++.+.++.||++.|+++||+.. +.+..... ++...+ +.+ ..+ + .
T Consensus 285 ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (516)
T 1rsg_A 285 AFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIV-RNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNL 363 (516)
T ss_dssp HTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHH-HHCCSHHHHHHHC---------CCCTTSSCEEEEEH
T ss_pred HHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhc-ccCcccchhhhcccccccccccccccccCceeEEEe
Confidence 9999999999999999999999753 22221111 110000 000 000 0 0
Q ss_pred ccCCCccEEEEEee-cc-ccccCC--ChHHHHHH---HHHHHHHhCCC-----ccc-cc-------cccceEEEEEEecC
Q 009198 405 YYNPNQSMLELVFA-PA-EEWISC--SDSEIIDA---TMKELAKLFPD-----EIS-AD-------QSKAKIVKYHVVKT 464 (540)
Q Consensus 405 ~~~~~~~~~~~~~~-~~-~~~~~~--~~e~~~~~---v~~~l~~~~p~-----~~~-~~-------~~~~~~~~~~~~~~ 464 (540)
+...+..++..+.. +. ..+..+ +++++.+. +++.+.++||. ... ++ +....+....|...
T Consensus 364 ~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~d 443 (516)
T 1rsg_A 364 SKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRD 443 (516)
T ss_dssp HHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTC
T ss_pred eecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCC
Confidence 11223334443332 22 345555 78887654 67777777652 111 10 11113555567777
Q ss_pred CCc--eecc-CCCCCCC--CCCCC-CCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhH
Q 009198 465 PRS--VYKT-IPNCEPC--RPLQR-SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 465 p~~--~~~~-~~~~~~~--~~~~~-~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
|++ .|.+ .|+.... ...+. .+.++|||||++++..|+++|+||++||+|||++|++.++.
T Consensus 444 p~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~ 509 (516)
T 1rsg_A 444 PYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKL 509 (516)
T ss_dssp TTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHG
T ss_pred CCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhhh
Confidence 774 4543 3443211 11122 36789999999999888899999999999999999998765
No 17
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=2.6e-31 Score=276.13 Aligned_cols=431 Identities=15% Similarity=0.120 Sum_probs=249.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccC----------------CCCeeeccceeeccCc
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG----------------DGDWYETGLHIFFGAY 118 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~----------------~g~~~d~G~~~~~~~~ 118 (540)
+..+||+|||||++||+||+.|++.|++|+|+|+++++||++.+.... ++..++.|++++...+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 88 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH 88 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH
Confidence 457899999999999999999999999999999999999998776532 5788899998887666
Q ss_pred ccHHHHHHhcCCCcccccccc-cceee-cCCCCCCcccccCCCCCCCchhH-HHHhhhcCCCCChhHHHHhhhchhhhHh
Q 009198 119 PNIQNLFGELGINDRLQWKEH-SMIFA-MPNKPGEFSRFDFPEVLPAPLNG-ILAILRNNEMLTWPEKVKFAIGLLPAII 195 (540)
Q Consensus 119 ~~~~~l~~~lgl~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (540)
.+.++++++|++........ ...+. ..+. .+.+ ....... ...+.. .+..+.....
T Consensus 89 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~g-~~~~~~~~~~~~~~------------~~~~l~~~~~ 147 (489)
T 2jae_A 89 -ITLDYCRELGVEIQGFGNQNANTFVNYQSDT-------SLSG-QSVTYRAAKADTFG------------YMSELLKKAT 147 (489)
T ss_dssp -THHHHHHHHTCCEEEECCCCTTSEEECCCSS-------TTTT-CCEEHHHHHHHHHH------------HHHHHHHHHH
T ss_pred -HHHHHHHHcCCceEEccccCCCceEEecCCc-------ccCC-ccccHHHHhhhhhc------------cHHHHHHHHH
Confidence 89999999998743211111 11111 1100 0001 1111110 001100 0000000000
Q ss_pred c---CcccccccCCCCHHHHHHHhCCCchhhhhcCCChHHHHHHHHH-HHhhccC--CCCccchHHHHHHHHHHHhh---
Q 009198 196 G---GQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIA-MSKALNF--INPDELSMQCILIALNRFLQ--- 266 (540)
Q Consensus 196 ~---~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~s~~~~~~~~~~~~~--- 266 (540)
. ........+..++.+|+.+... ......+.......++.. ....... .++.++...... .+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (489)
T 2jae_A 148 DQGALDQVLSREDKDALSEFLSDFGD---LSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRS-GIGRNFSFDF 223 (489)
T ss_dssp HHTTTTTTSCHHHHHHHHHHHHHHTT---CCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHH-TTTTTGGGGG
T ss_pred hccccccccchhhHHHHHHHHHHhhh---hhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhh-hHHHHHhhhh
Confidence 0 0000011123466777765310 000000000000000000 0000000 001111111110 0011111
Q ss_pred -hccCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCC---cEEEcCEEEEccCHHHHh
Q 009198 267 -EKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG---NVIDGDAYVFATPVDILK 342 (540)
Q Consensus 267 -~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G---~~i~a~~VI~A~~~~~~~ 342 (540)
......+.++.|| ++.+++.|++.+.+ ++|+++++|++|..+ ++.+ .|++.+| +++.||+||+|+|+..+.
T Consensus 224 ~~~~~~~~~~~~gG-~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~~~~ad~vI~a~p~~~l~ 298 (489)
T 2jae_A 224 GYDQAMMMFTPVGG-MDRIYYAFQDRIGT--DNIVFGAEVTSMKNV-SEGV-TVEYTAGGSKKSITADYAICTIPPHLVG 298 (489)
T ss_dssp CTTTSSSEEEETTC-TTHHHHHHHHHHCG--GGEETTCEEEEEEEE-TTEE-EEEEEETTEEEEEEESEEEECSCHHHHT
T ss_pred ccccCccEEeecCC-HHHHHHHHHHhcCC--CeEEECCEEEEEEEc-CCeE-EEEEecCCeEEEEECCEEEECCCHHHHH
Confidence 1123446677777 79999999988743 689999999999984 4444 4777776 579999999999999988
Q ss_pred hcCCCCchhhHHHHHHhccCCcCeEEEEEEecccccccc-C---cceeecCCceeEEeccCcccccccCCCccEEEEEee
Q 009198 343 LQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-D---HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA 418 (540)
Q Consensus 343 ~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~-~---~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 418 (540)
.|+. .++....+++.++.+.++.+|++.|++++|+.. + .+...+.++..++. .+... ..+...++..+..
T Consensus 299 ~l~~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~-~s~~~---~~~~~~l~~~~~~ 372 (489)
T 2jae_A 299 RLQN--NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMF-PYDHY---NSDRGVVVAYYSS 372 (489)
T ss_dssp TSEE--CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEEC-CSSST---TSSCEEEEEEEEE
T ss_pred hCcc--CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEe-CCCCC---CCCCCEEEEEeeC
Confidence 8765 245567788899999999999999999998643 1 22234445444332 22211 1122233322222
Q ss_pred c--cccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceecc---C------CCC-CCCCCCCCCCC
Q 009198 419 P--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKT---I------PNC-EPCRPLQRSPV 486 (540)
Q Consensus 419 ~--~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~---~------~~~-~~~~~~~~~~~ 486 (540)
+ ...|..++++++++.+++.|++++|......+ .......|.+.|++...+ . |+. ....+..+++.
T Consensus 373 g~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~~~--~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~ 450 (489)
T 2jae_A 373 GKRQEAFESLTHRQRLAKAIAEGSEIHGEKYTRDI--SSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPV 450 (489)
T ss_dssp THHHHHHHTSCHHHHHHHHHHHHHHHHCGGGGSSE--EEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCB
T ss_pred CchhhhhhcCCHHHHHHHHHHHHHHHcCcchhhhc--cccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCC
Confidence 2 35677889999999999999999985111111 122334456666542221 1 332 11233345678
Q ss_pred CCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhH
Q 009198 487 EGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 487 ~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
+||||||++++. +.++++||+.||++||++|++.++.
T Consensus 451 ~~l~faG~~~~~-~~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 451 DKIYFAGDHLSN-AIAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp TTEEECSGGGBS-STTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEeEHHhcc-CccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999864 4589999999999999999988765
No 18
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.97 E-value=9.7e-31 Score=269.71 Aligned_cols=416 Identities=16% Similarity=0.150 Sum_probs=272.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCC-CceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCcc
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~ 133 (540)
...+||+|||||++||++|++|++.| .+|+|+|+++.+||++.+....+|+.+|.|++++...++.+.++++++. +..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~~~-~~~ 85 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQYFDDVMDWAV-QGW 85 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBHHHHHHHHHHC-SCE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChHHHHHHHHHHh-hhh
Confidence 35689999999999999999999998 7999999999999999986447899999999999887778889998875 321
Q ss_pred cccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHH
Q 009198 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (540)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (540)
....... .... .+.+..+.+...+ ..+......+.+..+..... .....+..++.+|+
T Consensus 86 ~~~~~~~-~~~~---~g~~~~~P~~~~~--------------~~l~~~~~~~~~~~ll~~~~----~~~~~~~~s~~e~~ 143 (484)
T 4dsg_A 86 NVLQRES-WVWV---RGRWVPYPFQNNI--------------HRLPEQDRKRCLDELVRSHA----RTYTEPPNNFEESF 143 (484)
T ss_dssp EEEECCC-EEEE---TTEEEESSGGGCG--------------GGSCHHHHHHHHHHHHHHHH----CCCSSCCSSHHHHH
T ss_pred hhccCce-EEEE---CCEEEEeCccchh--------------hhCCHHHHHHHHHHHHHHHh----ccCCCCCCCHHHHH
Confidence 1111111 1111 1222111100000 01111222222222221100 11234568999999
Q ss_pred HHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHH---------HHHHHHHhhhcc------Ccceeeec-
Q 009198 214 RKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCI---------LIALNRFLQEKH------GSKMAFLD- 277 (540)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~---------~~~~~~~~~~~~------g~~~~~~~- 277 (540)
.++ ++..+.+.++.++....++.++++++..+. ...+...+.... ...+.|+.
T Consensus 144 ~~~-----------~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~ 212 (484)
T 4dsg_A 144 TRQ-----------FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQR 212 (484)
T ss_dssp HHH-----------HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESS
T ss_pred HHH-----------hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecC
Confidence 887 445556667777877788888887765321 111222222111 22345665
Q ss_pred CCCCccchhHHHHHHHHcCcEEEeC--cceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCC--CchhhH
Q 009198 278 GNPPERLCLPIVEHIQSLGGEVRLN--SRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPE--NWKEMA 353 (540)
Q Consensus 278 gg~~~~l~~~l~~~l~~~G~~i~~~--t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~--~~~~~~ 353 (540)
|| ++.++++|++.+.+. +|+++ ++|++|.. +++. |++.+|+++.||+||+|+|++.+.+++++ ...+..
T Consensus 213 gG-~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~-~~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~ 285 (484)
T 4dsg_A 213 GG-TGIIYQAIKEKLPSE--KLTFNSGFQAIAIDA-DAKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDE 285 (484)
T ss_dssp SC-THHHHHHHHHHSCGG--GEEECGGGCEEEEET-TTTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGG
T ss_pred CC-HHHHHHHHHhhhhhC--eEEECCCceeEEEEe-cCCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHH
Confidence 45 899999999888553 78899 56999986 4443 55688888999999999999999998854 224556
Q ss_pred HHHHHhccCCcCeEEEEEEecccccc---ccCcceeecCCc-eeEEeccCcccccccCCCccEEEEEeeccccccCCChH
Q 009198 354 YFKRLEKLVGVPVINIHIWFDRKLKN---TYDHLLFSRSSL-LSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDS 429 (540)
Q Consensus 354 ~~~~~~~~~~~~~~~i~l~~~~~~~~---~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 429 (540)
..+.+.++.|.++.++++.|+++... +...+.+.+... ......+++.+++.+|++.+++...+.....| ..+|+
T Consensus 286 ~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~-~~~d~ 364 (484)
T 4dsg_A 286 WPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYK-PVNHS 364 (484)
T ss_dssp HHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTB-CCCTT
T ss_pred HHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCC-cCCHH
Confidence 67788899999999999999987432 223333333221 12233455566777777777665554433334 67899
Q ss_pred HHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCC----CCCCCCCCCCeEEecccccCCCC-Cch
Q 009198 430 EIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPC----RPLQRSPVEGFYLAGDYTKQKYL-ASM 504 (540)
Q Consensus 430 ~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~l~~aG~~~~~~~~-~~~ 504 (540)
++++.++++|.++.+. .+. ..+....+.+||.+.+.+.++.... +..+. .. ||+++|......|. .++
T Consensus 365 ~l~~~a~~~L~~~~~~--~~~---~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~g~~~y~v~~~ 437 (484)
T 4dsg_A 365 TLIEDCIVGCLASNLL--LPE---DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRFGAWRYEVGNQ 437 (484)
T ss_dssp SHHHHHHHHHHHTTSC--CTT---CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTTTTCCGGGCSH
T ss_pred HHHHHHHHHHHHcCCC--Ccc---ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCCcccccCCCCh
Confidence 9999999999998542 111 1244456778888888777763221 11111 23 89999997776653 389
Q ss_pred HHHHHHHHHHHHHHH
Q 009198 505 EGAVLSGKLCAQAIV 519 (540)
Q Consensus 505 ~ga~~sg~~aA~~v~ 519 (540)
++|+.||+.||++|+
T Consensus 438 d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 438 DHSFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999997
No 19
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.97 E-value=3e-30 Score=277.11 Aligned_cols=418 Identities=19% Similarity=0.223 Sum_probs=239.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcc-cHHHHHHhcCCCcc
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYP-NIQNLFGELGINDR 133 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~-~~~~l~~~lgl~~~ 133 (540)
...+||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+....+|..+|.|++++.+... .+..+++++|++..
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCINNPVALMCEQLGISMH 413 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCccChHHHHHHHhCCccc
Confidence 35689999999999999999999999999999999999999998776678999999999976544 47788899998743
Q ss_pred cccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHH
Q 009198 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWM 213 (540)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l 213 (540)
...... ..+. ..+.. ........... .+........ .... ........++.+++
T Consensus 414 ~~~~~~-~l~~---~~g~~--------~~~~~~~~~~~-------~~~~ll~~~~----~~~~---~~~~~~d~sl~~~~ 467 (776)
T 4gut_A 414 KFGERC-DLIQ---EGGRI--------TDPTIDKRMDF-------HFNALLDVVS----EWRK---DKTQLQDVPLGEKI 467 (776)
T ss_dssp ECCSCC-CEEC---TTSCB--------CCHHHHHHHHH-------HHHHHHHHHH----HHGG---GCCGGGCCBHHHHH
T ss_pred cccccc-ceEc---cCCcc--------cchhHHHHHHH-------HHHHHHHHHH----HHhh---cccccccccHHHHH
Confidence 211110 0110 00000 00000000000 0000000000 0000 00011123333333
Q ss_pred HHhCCCchhhhhcCCChHHHHH-HHH---HHHhhccCCCCccchHHHHHHHHHHHhhhccCcceeeecCCCCccchhHHH
Q 009198 214 RKQVQPSDLVRELGVPDRVTTE-VFI---AMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIV 289 (540)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~g~~~~~~~gg~~~~l~~~l~ 289 (540)
.+. ...+++..++.....+. .+. .......+.....++...... ...+ ...+....+..+| ...+++.|.
T Consensus 468 ~~~--~~~~l~~~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~--~~~~-~~~~G~~~~~~~G-~~~l~~aLa 541 (776)
T 4gut_A 468 EEI--YKAFIKESGIQFSELEGQVLQFHLSNLEYACGSNLHQVSARSWDH--NEFF-AQFAGDHTLLTPG-YSVIIEKLA 541 (776)
T ss_dssp HHH--HHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTG--GGGS-CCCCSCEEECTTC-THHHHHHHH
T ss_pred HHH--HHHHHHhcCCCccchhHHHHHHHHHHHHHhcCCChHHcChhhhhh--hhhH-HhcCCCeEEECCh-HHHHHHHHH
Confidence 221 00111111332211111 000 000011112222222110000 0001 1122333444444 444444443
Q ss_pred HHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhc--CCCCchhhHHHHHHhccCCcCeE
Q 009198 290 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ--LPENWKEMAYFKRLEKLVGVPVI 367 (540)
Q Consensus 290 ~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~l--l~~~~~~~~~~~~~~~~~~~~~~ 367 (540)
.|++|+++++|++|+.+++ .+ .|++.+|+++.||+||+|+|+..+... ...+.+|....+++.++.+.++.
T Consensus 542 -----~gl~I~l~t~V~~I~~~~~-~v-~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~ 614 (776)
T 4gut_A 542 -----EGLDIQLKSPVQCIDYSGD-EV-QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIE 614 (776)
T ss_dssp -----TTSCEESSCCEEEEECSSS-SE-EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCE
T ss_pred -----hCCcEEcCCeeEEEEEcCC-EE-EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEE
Confidence 3789999999999997444 44 588899988999999999999998652 12233566778889999999999
Q ss_pred EEEEEecccccccc----Cccee-----ecCCceeEEeccCcccccccCCC-ccEEEEEeec--cccccCCChHHHHHHH
Q 009198 368 NIHIWFDRKLKNTY----DHLLF-----SRSSLLSVYADMSLTCKEYYNPN-QSMLELVFAP--AEEWISCSDSEIIDAT 435 (540)
Q Consensus 368 ~i~l~~~~~~~~~~----~~~~~-----~~~~~~~~~~~~s~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~e~~~~~v 435 (540)
||++.|+++||+.. +.+.. ....+...+.+. .+.+ ..++..++.+ ...|..++++++++.+
T Consensus 615 KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~-------~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~ 687 (776)
T 4gut_A 615 KIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDM-------DPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQC 687 (776)
T ss_dssp EEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEES-------CTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHH
T ss_pred EEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecC-------CCCCCceEEEEEecchhHHHHHcCCHHHHHHHH
Confidence 99999999999742 11111 111222222221 2233 3445444433 2567788999999999
Q ss_pred HHHHHHhCCCccccccccceEEEEEEecCCCc--eecc-CCCCC-CCCCCCCCC-CCCeEEecccccCCCCCchHHHHHH
Q 009198 436 MKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-IPNCE-PCRPLQRSP-VEGFYLAGDYTKQKYLASMEGAVLS 510 (540)
Q Consensus 436 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~~~~~-~~~~~~~~~-~~~l~~aG~~~~~~~~~~~~ga~~s 510 (540)
+++|.++||....+. ...+....|...|++ .|.+ .++.. .....+..| .++|||||++++..|+++|+||++|
T Consensus 688 l~~L~~ifg~~~~~~--P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~S 765 (776)
T 4gut_A 688 MATLRELFKEQEVPD--PTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLS 765 (776)
T ss_dssp HHHHHHHTTTSCCCC--CSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHH
T ss_pred HHHHHHHhCcccccC--cceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHH
Confidence 999999998632222 223455566677764 3433 23321 112223345 5899999999998888999999999
Q ss_pred HHHHHHHHHH
Q 009198 511 GKLCAQAIVQ 520 (540)
Q Consensus 511 g~~aA~~v~~ 520 (540)
|++||++|++
T Consensus 766 G~RaA~~Ila 775 (776)
T 4gut_A 766 GVREASKIAA 775 (776)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHh
Confidence 9999999975
No 20
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=239.81 Aligned_cols=223 Identities=14% Similarity=0.119 Sum_probs=155.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCC--chhhHHHHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPEN--WKEMAYFKRL 358 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~--~~~~~~~~~~ 358 (540)
+..+++.|++.+ |++|+++++|++|+.+++ .+ .|++.+|+++.||+||+|+|+..+.+|+++. .++....+.+
T Consensus 111 ~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~~-~~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l 185 (342)
T 3qj4_A 111 ISSIIKHYLKES---GAEVYFRHRVTQINLRDD-KW-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQL 185 (342)
T ss_dssp TTHHHHHHHHHH---TCEEESSCCEEEEEECSS-SE-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHhc---CCEEEeCCEEEEEEEcCC-EE-EEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHH
Confidence 677777777665 899999999999998444 44 4888888778999999999999999998752 2344667889
Q ss_pred hccCCcCeEEEEEEeccccccc--cCcceeecCCceeEEeccCccccccc-CCCccEEEEEeec--cccccCCChHHHHH
Q 009198 359 EKLVGVPVINIHIWFDRKLKNT--YDHLLFSRSSLLSVYADMSLTCKEYY-NPNQSMLELVFAP--AEEWISCSDSEIID 433 (540)
Q Consensus 359 ~~~~~~~~~~i~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~e~~~~ 433 (540)
.++.|.++.++++.|++++|.+ +.++...+.+...+.+..+.. +... +++..++.....+ ..++.+.+++++++
T Consensus 186 ~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k-~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 264 (342)
T 3qj4_A 186 EAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK-RNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQE 264 (342)
T ss_dssp HTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH-TTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHH
T ss_pred hcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC-CCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHH
Confidence 9999999999999999886643 444444444433433222211 2111 2222233222222 14466789999999
Q ss_pred HHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCC--CCCCCeEEecccccCCCCCchHHHHHHH
Q 009198 434 ATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQR--SPVEGFYLAGDYTKQKYLASMEGAVLSG 511 (540)
Q Consensus 434 ~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~l~~aG~~~~~~~~~~~~ga~~sg 511 (540)
.++++|.+++|.... +..+.+.+|.++.+.+... .++... ...++|++|||++.. +++++|+.||
T Consensus 265 ~~~~~l~~~~g~~~~-------p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g---~~v~~ai~sg 331 (342)
T 3qj4_A 265 LVFQQLENILPGLPQ-------PIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ---SNFDGCITSA 331 (342)
T ss_dssp HHHHHHHHHSCSCCC-------CSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC---SSHHHHHHHH
T ss_pred HHHHHHHHhccCCCC-------CceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC---CCccHHHHHH
Confidence 999999999984322 3445677888887654321 122222 356899999999976 6999999999
Q ss_pred HHHHHHHHHHH
Q 009198 512 KLCAQAIVQDY 522 (540)
Q Consensus 512 ~~aA~~v~~~l 522 (540)
++||++|+++|
T Consensus 332 ~~aa~~i~~~l 342 (342)
T 3qj4_A 332 LCVLEALKNYI 342 (342)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHhhC
Confidence 99999998653
No 21
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.96 E-value=5.8e-29 Score=261.14 Aligned_cols=253 Identities=12% Similarity=0.070 Sum_probs=166.6
Q ss_pred CcceeeecCCCCccchhHHHHHHHHcCcEEEeCccee--EEEEccCC-----cEEEE-EEcCCc--EEEcCEEEEccCHH
Q 009198 270 GSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQ--KIELNDDG-----TVKNF-LLTNGN--VIDGDAYVFATPVD 339 (540)
Q Consensus 270 g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~--~I~~~~~~-----~~~~V-~~~~G~--~i~a~~VI~A~~~~ 339 (540)
+..+..+.|| ++.|+++|++.+.+ |..|+++++|+ +|...+++ ..+.| .+.+|+ ++.||+||+|+|..
T Consensus 336 ~~~~~~i~GG-~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~ 413 (721)
T 3ayj_A 336 SNEYTLPVTE-NVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHD 413 (721)
T ss_dssp TCEECCSSSS-THHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHH
T ss_pred ccceeEECCc-HHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHH
Confidence 4456677777 79999999998754 56788999999 99975444 12356 456676 79999999999998
Q ss_pred HHhh------cC----------------------CCCch-h-------hHHHHHHhccCCcCeEEEEEEe-----ccccc
Q 009198 340 ILKL------QL----------------------PENWK-E-------MAYFKRLEKLVGVPVINIHIWF-----DRKLK 378 (540)
Q Consensus 340 ~~~~------ll----------------------~~~~~-~-------~~~~~~~~~~~~~~~~~i~l~~-----~~~~~ 378 (540)
.+.. +- .++.+ + ....++++++++.+..||++.| +++||
T Consensus 414 ~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW 493 (721)
T 3ayj_A 414 QLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWV 493 (721)
T ss_dssp HHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTS
T ss_pred HHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcc
Confidence 8743 21 12222 5 6788999999999999999999 99999
Q ss_pred cccCc----ceeecCCceeEEeccCcccccccCCCccEEEEEeec---cccc------cCCChHH-------HHHHHHHH
Q 009198 379 NTYDH----LLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAP---AEEW------ISCSDSE-------IIDATMKE 438 (540)
Q Consensus 379 ~~~~~----~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~------~~~~~e~-------~~~~v~~~ 438 (540)
+...+ ..+++.++..++..++.....+.+++..++...|+- ...| ..+++++ +++.++++
T Consensus 494 ~~~~g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~ 573 (721)
T 3ayj_A 494 PQWRGEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNR 573 (721)
T ss_dssp CEETTEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHH
T ss_pred cccCCCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHH
Confidence 76522 245666665544222111012223344444443332 3445 3334444 49999999
Q ss_pred HH--HhCCCccc----------cccccceEEEEEEecCCCce--e-ccCCCC-------CCCC--CCCCCCCCCeEEecc
Q 009198 439 LA--KLFPDEIS----------ADQSKAKIVKYHVVKTPRSV--Y-KTIPNC-------EPCR--PLQRSPVEGFYLAGD 494 (540)
Q Consensus 439 l~--~~~p~~~~----------~~~~~~~~~~~~~~~~p~~~--~-~~~~~~-------~~~~--~~~~~~~~~l~~aG~ 494 (540)
|. +++|+... .+........+.|...| +. | ...|+. ..+. .....+.++||||||
T Consensus 574 la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe 652 (721)
T 3ayj_A 574 AYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASD 652 (721)
T ss_dssp TCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSG
T ss_pred HhhhccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeeh
Confidence 99 88886320 01101234567788888 43 2 234553 1111 112346789999999
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHHHHHhHHH
Q 009198 495 YTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 526 (540)
Q Consensus 495 ~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~~ 526 (540)
+++. +.||+|||+.||++||..|+..+....
T Consensus 653 ~~S~-~~GWieGAl~Sa~~Aa~~i~~~~~~~~ 683 (721)
T 3ayj_A 653 SYSH-LGGWLEGAFMSALNAVAGLIVRANRGD 683 (721)
T ss_dssp GGSS-CTTSHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhcc-CCceehHHHHHHHHHHHHHHHHhcCCC
Confidence 9985 568999999999999999999988744
No 22
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.96 E-value=3.6e-27 Score=254.71 Aligned_cols=243 Identities=19% Similarity=0.230 Sum_probs=160.7
Q ss_pred eeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC------CcEEEcCEEEEccCHHHHhhcCC-
Q 009198 274 AFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQLP- 346 (540)
Q Consensus 274 ~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~------G~~i~a~~VI~A~~~~~~~~ll~- 346 (540)
..+.|| ++.|++.|.+ +.+|++|++|++|...+++ + .|++.+ |+++.||+||+|+|..++.+++.
T Consensus 565 ~~~~gG-~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g-V-~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~ 636 (852)
T 2xag_A 565 LTVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 636 (852)
T ss_dssp EEETTC-TTHHHHHHTT-----TCCEECSEEEEEEEEETTE-E-EEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred EEecCc-HHHHHHHHHh-----CCCEEeCCeEEEEEEcCCc-E-EEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcc
Confidence 345555 6777777764 4579999999999985443 3 477655 56899999999999999987432
Q ss_pred ---CCchhhHHHHHHhccCCcCeEEEEEEecccccccc-Cccee--e---cCCceeEEeccCcccccccCCCccEEEEEe
Q 009198 347 ---ENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLF--S---RSSLLSVYADMSLTCKEYYNPNQSMLELVF 417 (540)
Q Consensus 347 ---~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~-~~~~~--~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 417 (540)
.+.+|....++++++.+.++.||++.|+++||+.. +.+.+ . .......+++. . +..++..++
T Consensus 637 I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~------~---~~pvLl~~v 707 (852)
T 2xag_A 637 VQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL------Y---KAPILLALV 707 (852)
T ss_dssp SEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEEC------S---SSSEEEEEE
T ss_pred cccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCceEEEecC------C---CCCEEEEEe
Confidence 23356667788999999999999999999999752 22221 1 11112222221 1 122443333
Q ss_pred ec--cccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCc--eecc-CCCCCC--------------C
Q 009198 418 AP--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-IPNCEP--------------C 478 (540)
Q Consensus 418 ~~--~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~~~~~~--------------~ 478 (540)
.+ ...|..++++++++.++++|.++||....++ ...+....|...|++ .|.+ .++... .
T Consensus 708 ~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~--P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~ 785 (852)
T 2xag_A 708 AGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQ--PKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPS 785 (852)
T ss_dssp CHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCC--CSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCS
T ss_pred cCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCC--ceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccc
Confidence 32 2556788999999999999999998632222 123444555566663 3433 233211 0
Q ss_pred CCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhHHHhhcchhhhh
Q 009198 479 RPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARGKGRLAE 535 (540)
Q Consensus 479 ~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~~~~~~~~~~~ 535 (540)
++...++.++|||||++++..|+++|+||++||++||++|++.+...-..+.++-+|
T Consensus 786 ~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~~~~~~~~~~~~~ 842 (852)
T 2xag_A 786 IPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATP 842 (852)
T ss_dssp STTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHHCCGGGC------
T ss_pred cccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCC
Confidence 122345668999999999988889999999999999999999997655555444433
No 23
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.96 E-value=4.3e-27 Score=251.44 Aligned_cols=231 Identities=19% Similarity=0.241 Sum_probs=154.8
Q ss_pred eecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC------CcEEEcCEEEEccCHHHHhhcC---
Q 009198 275 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------GNVIDGDAYVFATPVDILKLQL--- 345 (540)
Q Consensus 275 ~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~------G~~i~a~~VI~A~~~~~~~~ll--- 345 (540)
.+.|| ++.|++.|++ +++|++|++|++|..++++ + .|++.+ |+++.||+||+|+|..++.++.
T Consensus 395 ~~~gG-~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~-v-~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i 466 (662)
T 2z3y_A 395 TVRNG-YSCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAV 466 (662)
T ss_dssp EETTC-TTHHHHHHTT-----TCEEETTEEEEEEEEETTE-E-EEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSS
T ss_pred eecCc-HHHHHHHHHh-----cCceecCCeEEEEEECCCc-E-EEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCce
Confidence 34455 6777776654 5689999999999985444 3 577665 5689999999999999988742
Q ss_pred -CCCchhhHHHHHHhccCCcCeEEEEEEecccccccc-Cccee--e-c--CCceeEEeccCcccccccCCCccEEEEEee
Q 009198 346 -PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTY-DHLLF--S-R--SSLLSVYADMSLTCKEYYNPNQSMLELVFA 418 (540)
Q Consensus 346 -~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~-~~~~~--~-~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 418 (540)
-.+.+|....++++++.+.++.||++.|+++||+.. +.+.+ . . ......+++. . +..++..++.
T Consensus 467 ~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~------~---~~~vL~~~~~ 537 (662)
T 2z3y_A 467 QFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNL------Y---KAPILLALVA 537 (662)
T ss_dssp EEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECC------S---SSSEEEEEEC
T ss_pred EEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeC------C---CCCEEEEEec
Confidence 123356667888999999999999999999999752 22211 1 1 1112222211 1 2234433333
Q ss_pred c--cccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCc--eecc-CCCCCC--------------CC
Q 009198 419 P--AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRS--VYKT-IPNCEP--------------CR 479 (540)
Q Consensus 419 ~--~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~--~~~~-~~~~~~--------------~~ 479 (540)
+ ...|..++++++++.++++|.++||....++ ...+....|...|++ .|.+ .|+... .+
T Consensus 538 G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~--p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~ 615 (662)
T 2z3y_A 538 GEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQ--PKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSI 615 (662)
T ss_dssp THHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCC--CSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC----
T ss_pred cHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCC--CceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccccc
Confidence 2 2556788999999999999999998632222 123444556666664 3433 233211 01
Q ss_pred CCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhH
Q 009198 480 PLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 480 ~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
+...++.++|||||++++..|+++|+||++||++||++|++.+..
T Consensus 616 ~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~g 660 (662)
T 2z3y_A 616 PGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG 660 (662)
T ss_dssp -----CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHccC
Confidence 223456689999999999888899999999999999999988753
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.94 E-value=2.7e-26 Score=233.97 Aligned_cols=409 Identities=15% Similarity=0.164 Sum_probs=223.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCC-CceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCcc
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGINDR 133 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~ 133 (540)
+.++||+|||||++||+||+.|++.| ++|+|+|+++++||++.+.. .+|+.+|.|++++...+..+.++++++|++..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCccc
Confidence 35679999999999999999999999 89999999999999999876 47889999999988777889999999998642
Q ss_pred cccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcC--cccccccCCCCHHH
Q 009198 134 LQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGG--QAYVEAQDGLTVQE 211 (540)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~ 211 (540)
. ......+.. ..+... .+...+.....+...+. ............+... ..........++.+
T Consensus 83 ~--~~~~~~~~~--~~g~~~---~~~~~~~~~~~~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 147 (424)
T 2b9w_A 83 G--PKLRREFLH--EDGEIY---VPEKDPVRGPQVMAAVQ--------KLGQLLATKYQGYDANGHYNKVHEDLMLPFDE 147 (424)
T ss_dssp S--CCCCEEEEC--TTSCEE---CGGGCTTHHHHHHHHHH--------HHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHH
T ss_pred c--ccccceeEc--CCCCEe---ccccCcccchhHHHHHH--------HHHHHHhhhhhhcccccchhhhhhhhccCHHH
Confidence 1 111111111 111110 00000100000000000 0000000000000000 00011223579999
Q ss_pred HHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHH--HhhhccCcceeeecCCCCccchhHHH
Q 009198 212 WMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNR--FLQEKHGSKMAFLDGNPPERLCLPIV 289 (540)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~--~~~~~~g~~~~~~~gg~~~~l~~~l~ 289 (540)
|+++. +.+ .+.+.+..++....+ .++++.++......+.. ......+..+ ...+| .+.+++.|.
T Consensus 148 ~l~~~----------~~~-~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~~l~~~l~ 213 (424)
T 2b9w_A 148 FLALN----------GCE-AARDLWINPFTAFGY-GHFDNVPAAYVLKYLDFVTMMSFAKGDLW-TWADG-TQAMFEHLN 213 (424)
T ss_dssp HHHHT----------TCG-GGHHHHTTTTCCCCC-CCTTTSBHHHHHHHSCHHHHHHHHHTCCB-CCTTC-HHHHHHHHH
T ss_pred HHHhh----------CcH-HHHHHHHHHHHhhcc-CChHhcCHHHHHHhhhHhhhhcccCCceE-EeCCh-HHHHHHHHH
Confidence 99987 443 233333333333332 35566776554322111 1111123333 34455 677777777
Q ss_pred HHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEEE
Q 009198 290 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINI 369 (540)
Q Consensus 290 ~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i 369 (540)
+.+ +.+|+++++|++|.. +++.+ .|++.+| ++.||+||+|+|++.+..+++.. + ..++.+.++.+.++. +
T Consensus 214 ~~l---~~~v~~~~~V~~i~~-~~~~v-~v~~~~g-~~~ad~Vv~a~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~-~ 283 (424)
T 2b9w_A 214 ATL---EHPAERNVDITRITR-EDGKV-HIHTTDW-DRESDVLVLTVPLEKFLDYSDAD--D-DEREYFSKIIHQQYM-V 283 (424)
T ss_dssp HHS---SSCCBCSCCEEEEEC-CTTCE-EEEESSC-EEEESEEEECSCHHHHTTSBCCC--H-HHHHHHTTCEEEEEE-E
T ss_pred Hhh---cceEEcCCEEEEEEE-ECCEE-EEEECCC-eEEcCEEEECCCHHHHhhccCCC--H-HHHHHHhcCCcceeE-E
Confidence 655 467899999999987 44455 4888888 59999999999999888777642 2 222334555544432 2
Q ss_pred EEEeccccccccCcceeecC--C-cee-EEeccCcccccccCC-CccEEEEEeeccccccCCChHHHHHHHHHHHHHhCC
Q 009198 370 HIWFDRKLKNTYDHLLFSRS--S-LLS-VYADMSLTCKEYYNP-NQSMLELVFAPAEEWISCSDSEIIDATMKELAKLFP 444 (540)
Q Consensus 370 ~l~~~~~~~~~~~~~~~~~~--~-~~~-~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~l~~~~p 444 (540)
.+.+...++. ...+ ++.. . ... .++.. . ...+. ...++..+......|...+++++++.+++.|.++.+
T Consensus 284 ~~~~~~~~~~-~~~~-~~~~~~~~~~g~~~~~~-~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~ 357 (424)
T 2b9w_A 284 DACLVKEYPT-ISGY-VPDNMRPERLGHVMVYY-H---RWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGH 357 (424)
T ss_dssp EEEEESSCCS-SEEE-CGGGGSGGGTTSCCEEE-E---CCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTC
T ss_pred EEEEeccCCc-cccc-ccCCCCCcCCCcceEEe-e---ecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCC
Confidence 2223333221 1111 1110 0 000 00000 0 01111 223333333334556677889999999999998433
Q ss_pred CccccccccceEEEEEEecCCC-ceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHH
Q 009198 445 DEISADQSKAKIVKYHVVKTPR-SVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 519 (540)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~ 519 (540)
. . + ..+....|...|. +...+..+.. .+....++.+|+||||+++.. +.+|+|+.||+++|++|+
T Consensus 358 ~-~-~----~~~~~~~w~~~p~~~~~~~~~G~~-~~~~~~~~~~~l~~aG~~~~~---g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 358 P-V-E----KIIEEQTWYYFPHVSSEDYKAGWY-EKVEGMQGRRNTFYAGEIMSF---GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp C-E-E----EEEEEEEEEEEEECCHHHHHTTHH-HHHHHTTTGGGEEECSGGGSC---SSHHHHHHHHHHHHHHHT
T ss_pred c-c-c----ccccccceeeeeccCHHHHhccHH-HHHHHHhCCCCceEecccccc---ccHHHHHHHHHHHHHHhc
Confidence 2 1 1 1111122322221 1001111100 011112345799999998864 789999999999999885
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.93 E-value=5.4e-24 Score=209.98 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=142.1
Q ss_pred HHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEE-cCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcC
Q 009198 287 PIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVID-GDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVP 365 (540)
Q Consensus 287 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~-a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 365 (540)
.+.+.+.+ |++|+++++|++|+.++++ + .|++.+|+.+. ||.||+|+|+..+.++++.. ......+..+.|.+
T Consensus 111 ~l~~~l~~-g~~i~~~~~v~~i~~~~~~-~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~---~~l~~~~~~~~~~~ 184 (336)
T 1yvv_A 111 AITRAMRG-DMPVSFSCRITEVFRGEEH-W-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA---PKLASVVAGVKMDP 184 (336)
T ss_dssp HHHHHHHT-TCCEECSCCEEEEEECSSC-E-EEEETTSCEEEEESEEEECSCHHHHGGGGTTC---HHHHHHHTTCCEEE
T ss_pred HHHHHHHc-cCcEEecCEEEEEEEeCCE-E-EEEeCCCcCccccCEEEEcCCHHHHHHhhccC---HHHHHHHhhcCccc
Confidence 34444433 8899999999999985444 3 48889997664 89999999999888887642 23456778888889
Q ss_pred eEEEEEEeccccccccCcceeecCCceeEEeccCcccccccCCCccEEEEEee-ccccccCCChHHHHHHHHHHHHHhCC
Q 009198 366 VINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA-PAEEWISCSDSEIIDATMKELAKLFP 444 (540)
Q Consensus 366 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~v~~~l~~~~p 444 (540)
+.++++.|++++|.+...+...+.++ .+.++.+. .+...+.+..++..... ....+..++++++.+.+++.+.+++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~-~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg 262 (336)
T 1yvv_A 185 TWAVALAFETPLQTPMQGCFVQDSPL-DWLARNRS-KPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELID 262 (336)
T ss_dssp EEEEEEEESSCCSCCCCEEEECSSSE-EEEEEGGG-STTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCS
T ss_pred eeEEEEEecCCCCCCCCeEEeCCCce-eEEEecCc-CCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 99999999999887665555454443 33322221 11111111222221111 12445678899999999999999998
Q ss_pred CccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhH
Q 009198 445 DEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
.... .+ ......+|.++...+..+. .....+.++|+||||++.. +++++|+.||.++|+.|++.+..
T Consensus 263 ~~~~-~p-----~~~~~~rw~~a~~~~~~~~----~~~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 263 CTMP-AP-----VFSLAHRWLYARPAGAHEW----GALSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp SCCC-CC-----SEEEEEEEEEEEESSCCCC----SCEEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCC-CC-----cEEEccccCccCCCCCCCC----CeeecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhhh
Confidence 5211 11 1122333433333322221 1112356899999999975 69999999999999999998764
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.89 E-value=7e-21 Score=194.79 Aligned_cols=388 Identities=13% Similarity=0.124 Sum_probs=210.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCe---------------eeccceeecc---
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDW---------------YETGLHIFFG--- 116 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~---------------~d~G~~~~~~--- 116 (540)
+.++||||||||++||+||+.|++.|++|+|+|+++.+||++.++...+++. ++.|.|+..+
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P 88 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLIP 88 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeecccc
Confidence 4678999999999999999999999999999999999999999865211011 4455555433
Q ss_pred ----CcccHHHHHHhcCCCcccccccccceeecCCCCCCcccccCCCCCCCc-hhHHHHhhhcCCCCChhHHHHhhhchh
Q 009198 117 ----AYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAP-LNGILAILRNNEMLTWPEKVKFAIGLL 191 (540)
Q Consensus 117 ----~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (540)
....+.++++++|+...+.+...+..+.+. .+.. +. ++.. ...+. . ......++... ..+.
T Consensus 89 ~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~--~g~~--~~----~p~~~~~~~~---~--~l~~~~~~~~~-~~~~ 154 (453)
T 2bcg_G 89 KFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK--QGKI--YK----VPANEIEAIS---S--PLMGIFEKRRM-KKFL 154 (453)
T ss_dssp CBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE--TTEE--EE----CCSSHHHHHH---C--TTSCHHHHHHH-HHHH
T ss_pred ceeecCcHHHHHHHhcCCccceEEEEccceeEEe--CCeE--EE----CCCChHHHHh---h--hccchhhHHHH-HHHH
Confidence 234688999999987655554443333221 1111 11 1111 11110 0 11111111111 1111
Q ss_pred hhHhcCc---c-ccc--ccCCCCHHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHh
Q 009198 192 PAIIGGQ---A-YVE--AQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFL 265 (540)
Q Consensus 192 ~~~~~~~---~-~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 265 (540)
....... + .+. .....++.+|++++ +....+.+ ++...............+.......+..+.
T Consensus 155 ~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~----------~~~~~l~~-~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~ 223 (453)
T 2bcg_G 155 EWISSYKEDDLSTHQGLDLDKNTMDEVYYKF----------GLGNSTKE-FIGHAMALWTNDDYLQQPARPSFERILLYC 223 (453)
T ss_dssp HHHHHCBTTBGGGSTTCCTTTSBHHHHHHHT----------TCCHHHHH-HHHHHTSCCSSSGGGGSBHHHHHHHHHHHH
T ss_pred HHHHHhccCCchhhhccccccCCHHHHHHHh----------CCCHHHHH-HHHHHHHhccCccccCCchHHHHHHHHHHH
Confidence 1000000 0 000 23467899999887 55544332 332221100000001112222221111111
Q ss_pred ---hhccCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEcc-CCcEEEEEEcCCcEEEcCEEEEccCHHHH
Q 009198 266 ---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELND-DGTVKNFLLTNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 266 ---~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~-~~~~~~V~~~~G~~i~a~~VI~A~~~~~~ 341 (540)
.......+.++.|| ++.++++|++.+++.|++|+++++|++|..+. ++++++|++ +|+++.||+||+|++++.
T Consensus 224 ~s~~~~~~~~~~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~- 300 (453)
T 2bcg_G 224 QSVARYGKSPYLYPMYG-LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFP- 300 (453)
T ss_dssp HHHHHHSSCSEEEETTC-TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCG-
T ss_pred HHHHhhcCCceEeeCCC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccc-
Confidence 11123456688888 79999999999999999999999999999742 677777887 477899999999999874
Q ss_pred hhcCCCCchhhHHHHHHhccCCcCeEEEEEEecccccc--cc-C-cceeecCC---ceeEEec-cCcccccccCCCccEE
Q 009198 342 KLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN--TY-D-HLLFSRSS---LLSVYAD-MSLTCKEYYNPNQSML 413 (540)
Q Consensus 342 ~~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~--~~-~-~~~~~~~~---~~~~~~~-~s~~~~~~~~~~~~~~ 413 (540)
.++ .+... .....++.+++++.. .. . .+++.... -..+|.. ++... ..+|+|..++
T Consensus 301 ~~l--------------~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d-~~aP~G~~~~ 364 (453)
T 2bcg_G 301 EKC--------------KSTGQ-RVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYVAIVSDAH-NVCSKGHYLA 364 (453)
T ss_dssp GGE--------------EEEEE-EEEEEEEEESSCCTTSTTCSSEEEEECGGGTTCSSCEEEEEEEGGG-TSSCTTCEEE
T ss_pred hhh--------------cccCC-cceeEEEEEccccCCCCCCccEEEEeCccccCCCCCEEEEEeCCCC-CCCCCCcEEE
Confidence 222 11110 122222337776531 11 1 22333211 1123332 23333 6788888776
Q ss_pred EEE-eeccccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEe
Q 009198 414 ELV-FAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLA 492 (540)
Q Consensus 414 ~~~-~~~~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~a 492 (540)
.+. .++. .+.++-++ ..++.+.|.. ...+.... .|. |- .....+|||++
T Consensus 365 ~v~~~~~~-----~~~~~~l~---~~~~~l~~~~-------~~~~~~~~------~~~--~~-------~~~~~~~~~~~ 414 (453)
T 2bcg_G 365 IISTIIET-----DKPHIELE---PAFKLLGPIE-------EKFMGIAE------LFE--PR-------EDGSKDNIYLS 414 (453)
T ss_dssp EEEEECCS-----SCHHHHTH---HHHGGGCSCS-------EEEEEEEE------EEE--ES-------SCSTTTSEEEC
T ss_pred EEEEecCC-----CCHHHHHH---HHHHHhhhHH-------Hhhccchh------eee--ec-------CCCCCCCEEEC
Confidence 543 3332 12222223 3333444431 12222221 111 10 11234799999
Q ss_pred cccccCCCCCchHHHHHHHHHHHHHHH
Q 009198 493 GDYTKQKYLASMEGAVLSGKLCAQAIV 519 (540)
Q Consensus 493 G~~~~~~~~~~~~ga~~sg~~aA~~v~ 519 (540)
|++-.. ..+++++.++++++++|.
T Consensus 415 ~~~~~~---~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 415 RSYDAS---SHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp CCCCSC---SBSHHHHHHHHHHHHHHH
T ss_pred CCCCcc---ccHHHHHHHHHHHHHHHH
Confidence 987765 578999999999999998
No 27
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.88 E-value=7.4e-23 Score=205.82 Aligned_cols=264 Identities=14% Similarity=0.151 Sum_probs=167.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCceEEEecCCCCCcceeeeccC-CCCee-eccceeeccCcccHHHHHHhcCCCc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~~~gG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lgl~~ 132 (540)
.++||+|||||++||+||+.|++. |++|+|+|+++.+||++.+.... +|..+ +.|+|++...++.+.++++++|+..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~ 85 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT 85 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHTTTCCBC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh
Confidence 468999999999999999999999 99999999999999999987743 67877 4999999887888999999998732
Q ss_pred ccccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHH-hhhchhhhHhcCcccccccCCCCHHH
Q 009198 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVK-FAIGLLPAIIGGQAYVEAQDGLTVQE 211 (540)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~ 211 (540)
. +... ..+.. .++... .|.....+..++... +. .+..+ .+...... ....+..++.+
T Consensus 86 ~--~~~~-~~~~~---~G~~~~------~p~~~~~~~~l~~~~--~~-~~~~~~~l~~~~~~-------~~~~~~~s~~e 143 (399)
T 1v0j_A 86 D--YRHR-VFAMH---NGQAYQ------FPMGLGLVSQFFGKY--FT-PEQARQLIAEQAAE-------IDTADAQNLEE 143 (399)
T ss_dssp C--CCCC-EEEEE---TTEEEE------ESSSHHHHHHHHTSC--CC-HHHHHHHHHHHGGG-------SCTTC----CC
T ss_pred c--cccc-eEEEE---CCEEEe------CCCCHHHHHHHhccc--CC-HHHHHHHHHHHhhc-------cCCCCcccHHH
Confidence 1 1111 11111 122111 122222233333211 11 12221 11111111 01234578888
Q ss_pred HHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHH-hhhcc-Ccce-eeecCCCCccchhHH
Q 009198 212 WMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEKH-GSKM-AFLDGNPPERLCLPI 288 (540)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~~-g~~~-~~~~gg~~~~l~~~l 288 (540)
|+.+. ++..+.+.++.++....++.+++++++.........+ ..... ...+ .++.|| ++.++++|
T Consensus 144 ~l~~~-----------~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l 211 (399)
T 1v0j_A 144 KAISL-----------IGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDG-YTAWLQNM 211 (399)
T ss_dssp HHHHH-----------HCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTH-HHHHHHHH
T ss_pred HHHHH-----------HhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhccccccc-HHHHHHHH
Confidence 88876 5677788888888888888888888865431000000 01111 1123 267766 67777777
Q ss_pred HHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEE-EcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeE
Q 009198 289 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVI-DGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVI 367 (540)
Q Consensus 289 ~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i-~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (540)
++ +.|++|++|++|++|.. . | + ++ .||+||+|+|+..+.++. +.++.|.++.
T Consensus 212 ~~---~~g~~I~l~~~V~~I~~-~------v---~--~~~~aD~VI~t~p~~~l~~~~------------l~~l~y~s~~ 264 (399)
T 1v0j_A 212 AA---DHRIEVRLNTDWFDVRG-Q------L---R--PGSPAAPVVYTGPLDRYFDYA------------EGRLGWRTLD 264 (399)
T ss_dssp TC---STTEEEECSCCHHHHHH-H------H---T--TTSTTCCEEECSCHHHHTTTT------------TCCCCEEEEE
T ss_pred Hh---cCCeEEEECCchhhhhh-h------h---h--hcccCCEEEECCcHHHHHhhh------------hCCCCcceEE
Confidence 65 35789999999999964 1 2 1 35 799999999999877651 3356777777
Q ss_pred EEEEEeccccccc
Q 009198 368 NIHIWFDRKLKNT 380 (540)
Q Consensus 368 ~i~l~~~~~~~~~ 380 (540)
.+.+.++.+...+
T Consensus 265 ~~~~~~~~~~~~~ 277 (399)
T 1v0j_A 265 FEVEVLPIGDFQG 277 (399)
T ss_dssp EEEEEESSSCSSS
T ss_pred EEEEEEccccCCC
Confidence 8888888764433
No 28
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.86 E-value=2.2e-20 Score=188.63 Aligned_cols=263 Identities=15% Similarity=0.095 Sum_probs=179.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccC-------------------CCCeeeccceee
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-------------------DGDWYETGLHIF 114 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~-------------------~g~~~d~G~~~~ 114 (540)
.+..+||+|||+|++|+++|+.|++.|++|+|+|+++..||.+.++... .++.+|++.+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 3467899999999999999999999999999999999999998876411 246788887777
Q ss_pred ccCcccHHHHHHhcCCCcccccccccceeecCCC-------CCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhh
Q 009198 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNK-------PGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFA 187 (540)
Q Consensus 115 ~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (540)
. ....+.+++.+.|+...+.|......+..... .++. +. +|.. ....++ ...+.+.++.+..
T Consensus 97 ~-~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~--~~----VPss---~~e~~~-~~lLs~~eK~~l~ 165 (475)
T 3p1w_A 97 L-VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFI--HK----VPAT---DMEALV-SPLLSLMEKNRCK 165 (475)
T ss_dssp E-TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEE--EE----CCCS---HHHHHT-CTTSCHHHHHHHH
T ss_pred e-cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCce--Ee----CCCC---HHHHhh-ccCCCHHHHHHHH
Confidence 5 34468889999999988888877666543211 1111 11 2222 233443 3577788887765
Q ss_pred hchhhhHhcCcc---ccc--ccCCCCHHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHH
Q 009198 188 IGLLPAIIGGQA---YVE--AQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALN 262 (540)
Q Consensus 188 ~~~~~~~~~~~~---~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 262 (540)
+.+......... .+. ..+..++.+|++++ +++..+.+.++..+.-.. ..+..+.++...+..+.
T Consensus 166 kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~----------gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~ 234 (475)
T 3p1w_A 166 NFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHF----------NLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIK 234 (475)
T ss_dssp HHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHH
T ss_pred HHHHHHHhhhhccchhhhcccccCCCHHHHHHHc----------CCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHH
Confidence 444332221111 111 23467999999998 887766553322221111 11222345444443333
Q ss_pred HHh---hhccCcceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHH
Q 009198 263 RFL---QEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 339 (540)
Q Consensus 263 ~~~---~~~~g~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~ 339 (540)
.+. ....++.+.|+.|| +..++++|++.+++.|++|+++++|++|..++++++++|++.+|+++.||+||+|++..
T Consensus 235 ~y~~Sl~~yg~s~~~yp~gG-~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 235 LYMQSISAFGKSPFIYPLYG-LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHSSCSEEEETTC-TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHhhcCCCceEEECCC-HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 332 11234678899999 89999999999999999999999999999756778889999999889999999998765
No 29
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.86 E-value=2.7e-19 Score=181.82 Aligned_cols=384 Identities=14% Similarity=0.117 Sum_probs=214.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeec-c------C-------------CCCeeeccceee
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWK-D------G-------------DGDWYETGLHIF 114 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~-~------~-------------~g~~~d~G~~~~ 114 (540)
+.++||+|||||++|+++|+.|++.|++|+|+|+++.+||++.++. . . .++.+|.|++++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l 83 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFL 83 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCccee
Confidence 3568999999999999999999999999999999999999998876 1 0 346677787776
Q ss_pred ccCcccHHHHHHhcCCCcccccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhH
Q 009198 115 FGAYPNIQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAI 194 (540)
Q Consensus 115 ~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (540)
... ..+.++++++|+...+.+...+..+... .+.. +.+ +... ...+. ..+....++... ..+....
T Consensus 84 ~~~-~~l~~ll~~lgl~~~l~~~~~~~~~~~~--~g~~--~~~----p~~~---~~~~~-~~l~~~~~~~~~-~~~~~~~ 149 (433)
T 1d5t_A 84 MAN-GQLVKMLLYTEVTRYLDFKVVEGSFVYK--GGKI--YKV----PSTE---TEALA-SNLMGMFEKRRF-RKFLVFV 149 (433)
T ss_dssp ETT-SHHHHHHHHHTGGGGCCEEECCEEEEEE--TTEE--EEC----CCSH---HHHHH-CSSSCHHHHHHH-HHHHHHH
T ss_pred ecc-chHHHHHHHcCCccceEEEEeCceEEee--CCEE--EEC----CCCH---HHHhh-CcccChhhHHHH-HHHHHHH
Confidence 543 3678899999987655554443332221 1211 111 1111 00000 011111111111 0111100
Q ss_pred hcCc---c---cccccCCCCHHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhh--
Q 009198 195 IGGQ---A---YVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ-- 266 (540)
Q Consensus 195 ~~~~---~---~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-- 266 (540)
.... + ........++.+|++++ +.+..+. .++...+....+.++.+.+.......+..+..
T Consensus 150 ~~~~~~~p~~~~~~~~~~~s~~~~l~~~----------~~~~~l~-~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~ 218 (433)
T 1d5t_A 150 ANFDENDPKTFEGVDPQNTSMRDVYRKF----------DLGQDVI-DFTGHALALYRTDDYLDQPCLETINRIKLYSESL 218 (433)
T ss_dssp HHCCTTCGGGGTTCCTTTSBHHHHHHHT----------TCCHHHH-HHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSC
T ss_pred HhhcccCchhccccccccCCHHHHHHHc----------CCCHHHH-HHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHH
Confidence 0000 0 00123567999999887 5554432 33322211111123333343322222222222
Q ss_pred hccC-cceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcC
Q 009198 267 EKHG-SKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 345 (540)
Q Consensus 267 ~~~g-~~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll 345 (540)
..+| ..+.++.|| ++.++++|++.+++.|++|+++++|++|.. +++++++|.+ +|+++.||+||+|++++. ..+
T Consensus 219 ~~~g~~~~~~p~gG-~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~-~g~~~~ad~VV~a~~~~~-~~~- 293 (433)
T 1d5t_A 219 ARYGKSPYLYPLYG-LGELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKS-EGEVARCKQLICDPSYVP-DRV- 293 (433)
T ss_dssp CSSSCCSEEEETTC-TTHHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEE-TTEEEECSEEEECGGGCG-GGE-
T ss_pred HhcCCCcEEEeCcC-HHHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEEE-CCeEEECCEEEECCCCCc-ccc-
Confidence 1122 346788888 899999999999999999999999999987 5667766765 677899999999999875 221
Q ss_pred CCCchhhHHHHHHhccCCcCeEEEEEEecccccc----ccCcceeec-----CCceeEEec-cCcccccccCCCccEEEE
Q 009198 346 PENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKN----TYDHLLFSR-----SSLLSVYAD-MSLTCKEYYNPNQSMLEL 415 (540)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~----~~~~~~~~~-----~~~~~~~~~-~s~~~~~~~~~~~~~~~~ 415 (540)
. ++.. ... .++.+++++.. ....+++.. .+. ++.. ++ ..+..+|+|..++.+
T Consensus 294 ~-------------~~~~-~~~-~~~il~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~v~~~s-~d~~~aP~G~~~~~~ 355 (433)
T 1d5t_A 294 R-------------KAGQ-VIR-IICILSHPIKNTNDANSCQIIIPQNQVNRKSD--IYVCMIS-YAHNVAAQGKYIAIA 355 (433)
T ss_dssp E-------------EEEE-EEE-EEEEESSCCTTSTTCSSEEEEECGGGTTCSSC--EEEEEEE-GGGTSSCTTCEEEEE
T ss_pred c-------------ccCc-cee-EEEEEcCcccccCCCceEEEEeCccccCCCCC--EEEEEEC-CCCcccCCCCEEEEE
Confidence 1 1111 111 22236666531 112223322 222 2322 33 566788888877654
Q ss_pred E-eeccccccCCChHHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecc
Q 009198 416 V-FAPAEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGD 494 (540)
Q Consensus 416 ~-~~~~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~ 494 (540)
. .++.. +.+ +++...++.+.|.. ...+.... .|.... ....+|+|++++
T Consensus 356 ~~~~p~~-----~~~---~~l~~~~~~l~~~~-------~~~~~~~~------~~~~~~---------~~~~~~~~~~~~ 405 (433)
T 1d5t_A 356 STTVETT-----DPE---KEVEPALGLLEPID-------QKFVAISD------LYEPID---------DGSESQVFCSCS 405 (433)
T ss_dssp EEECCSS-----CHH---HHTHHHHTTTCSCS-------EEEEEEEE------EEEESC---------CSTTTCEEECCC
T ss_pred EEecCCC-----CHH---HHHHHHHHHhhhHH-------hheeccce------eeeecC---------CCCCCCEEECCC
Confidence 3 33321 222 22333344443431 12222221 111110 123479999988
Q ss_pred cccCCCCCchHHHHHHHHHHHHHHH
Q 009198 495 YTKQKYLASMEGAVLSGKLCAQAIV 519 (540)
Q Consensus 495 ~~~~~~~~~~~ga~~sg~~aA~~v~ 519 (540)
+-.. ..+|+++.+++..-++|.
T Consensus 406 ~d~~---~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 406 YDAT---THFETTCNDIKDIYKRMA 427 (433)
T ss_dssp CCSC---SBSHHHHHHHHHHHHHHH
T ss_pred CCcc---ccHHHHHHHHHHHHHHHh
Confidence 6654 467999999998888875
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.86 E-value=1e-20 Score=188.86 Aligned_cols=252 Identities=17% Similarity=0.183 Sum_probs=165.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccC-CCCee-eccceeeccCcccHHHHHHhcCCCccc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDG-DGDWY-ETGLHIFFGAYPNIQNLFGELGINDRL 134 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~-~g~~~-d~G~~~~~~~~~~~~~l~~~lgl~~~~ 134 (540)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||++.+.... .|..+ +.|+|++...++.+.+++++++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~- 81 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNYVNKHAEMMP- 81 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHHHHTTSCEEE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHHHHHHhhhcc-
Confidence 4799999999999999999999999999999999999999887633 67765 89999999888889999999985221
Q ss_pred ccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHHH
Q 009198 135 QWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMR 214 (540)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 214 (540)
+... ..... .+.... .|.....+..++... +...+..+.+..... .. ..+..++.+|+.
T Consensus 82 -~~~~-~~~~~---~g~~~~------~P~~~~~~~~l~~~~--~~~~~~~~~l~~~~~----~~----~~~~~sl~e~~~ 140 (384)
T 2bi7_A 82 -YVNR-VKATV---NGQVFS------LPINLHTINQFFSKT--CSPDEARALIAEKGD----ST----IADPQTFEEEAL 140 (384)
T ss_dssp -CCCC-EEEEE---TTEEEE------ESCCHHHHHHHTTCC--CCHHHHHHHHHHHSC----CS----CSSCCBHHHHHH
T ss_pred -cccc-eEEEE---CCEEEE------CCCChhHHHHHhccc--CCHHHHHHHHHHhhh----cc----CCCCcCHHHHHH
Confidence 1111 01111 111111 122222333333211 111111112111111 00 235679999998
Q ss_pred HhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHH-hhh-ccCcce-eeecCCCCccchhHHHHH
Q 009198 215 KQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQE-KHGSKM-AFLDGNPPERLCLPIVEH 291 (540)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~-~~g~~~-~~~~gg~~~~l~~~l~~~ 291 (540)
+. ++..+.+.++.++....++.++++++..........+ ... .....+ .++.|| ++.+++.|++
T Consensus 141 ~~-----------~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~- 207 (384)
T 2bi7_A 141 RF-----------IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCG-YTQMIKSILN- 207 (384)
T ss_dssp HH-----------HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTH-HHHHHHHHHC-
T ss_pred Hh-----------hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcC-HHHHHHHHHh-
Confidence 87 5677888899999999999999988865421000000 011 112234 377777 6777777765
Q ss_pred HHHcCcEEEeCccee-EEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEEEE
Q 009198 292 IQSLGGEVRLNSRVQ-KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIH 370 (540)
Q Consensus 292 l~~~G~~i~~~t~V~-~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~ 370 (540)
+.|++|+++++|+ +|.. .+|+||+|+|+..+..++ +.++.|.+...+.
T Consensus 208 --~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~------------lg~l~y~s~~~v~ 256 (384)
T 2bi7_A 208 --HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ------------YGRLGYRTLDFKK 256 (384)
T ss_dssp --STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT------------TCCCCEEEEEEEE
T ss_pred --cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh------------cCCCCcceEEEEE
Confidence 3578999999999 7842 299999999999877652 2346777777777
Q ss_pred EEec
Q 009198 371 IWFD 374 (540)
Q Consensus 371 l~~~ 374 (540)
+.++
T Consensus 257 ~~~d 260 (384)
T 2bi7_A 257 FTYQ 260 (384)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8887
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.86 E-value=3.1e-21 Score=191.63 Aligned_cols=258 Identities=17% Similarity=0.149 Sum_probs=167.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeee-ccceeeccCcccHHHHHHhcCCCcccc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYE-TGLHIFFGAYPNIQNLFGELGINDRLQ 135 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d-~G~~~~~~~~~~~~~l~~~lgl~~~~~ 135 (540)
++||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.+.. .+|..++ .|+|++...++.+.+++++++....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~-- 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWDYVNDLVEFNR-- 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHHHHHTTSCBCC--
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHHHHHHhhhhhh--
Confidence 36999999999999999999999999999999999999998876 4678885 8999998777788889988875321
Q ss_pred cccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHHHHH
Q 009198 136 WKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRK 215 (540)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 215 (540)
+..... ... .+... . .|.....+..++... ...+....+...... ....+..++.+|+.+
T Consensus 78 ~~~~~~-~~~---~g~~~--~----~p~~~~~~~~l~~~~---~~~~~~~~l~~~~~~-------~~~~~~~s~~~~~~~ 137 (367)
T 1i8t_A 78 FTNSPL-AIY---KDKLF--N----LPFNMNTFHQMWGVK---DPQEAQNIINAQKKK-------YGDKVPENLEEQAIS 137 (367)
T ss_dssp CCCCCE-EEE---TTEEE--E----SSBSHHHHHHHHCCC---CHHHHHHHHHHHTTT-------TCCCCCCSHHHHHHH
T ss_pred ccccce-EEE---CCeEE--E----cCCCHHHHHHHhccC---CHHHHHHHHHHHhhc-------cCCCCCccHHHHHHH
Confidence 111111 111 11111 1 122233333333211 111111111111110 112356799999988
Q ss_pred hCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHH-hhhc-cCcce-eeecCCCCccchhHHHHHH
Q 009198 216 QVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRF-LQEK-HGSKM-AFLDGNPPERLCLPIVEHI 292 (540)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-~~~~-~g~~~-~~~~gg~~~~l~~~l~~~l 292 (540)
+ ++..+.+.++.++....++.+++++++.........+ .... ....+ .++.|| ++.++++|++
T Consensus 138 ~-----------~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG-~~~l~~~l~~-- 203 (367)
T 1i8t_A 138 L-----------VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGG-YTKLIEKMLE-- 203 (367)
T ss_dssp H-----------HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTC-HHHHHHHHHT--
T ss_pred H-----------HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCC-HHHHHHHHhc--
Confidence 7 5677788888999988899999998865321000000 0011 12234 377777 6777777765
Q ss_pred HHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEEEEEE
Q 009198 293 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIW 372 (540)
Q Consensus 293 ~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~ 372 (540)
|++|++|++|++|.. . | ++.+|+||+|+|+..+..+ .+.++.|.++..+++.
T Consensus 204 ---g~~i~l~~~V~~i~~----~---v------~~~~D~VV~a~p~~~~~~~------------~l~~l~y~s~~~v~~~ 255 (367)
T 1i8t_A 204 ---GVDVKLGIDFLKDKD----S---L------ASKAHRIIYTGPIDQYFDY------------RFGALEYRSLKFETER 255 (367)
T ss_dssp ---TSEEECSCCGGGSHH----H---H------HTTEEEEEECSCHHHHTTT------------TTCCCCEEEEEEEEEE
T ss_pred ---CCEEEeCCceeeech----h---h------hccCCEEEEeccHHHHHHH------------hhCCCCCceEEEEEEE
Confidence 689999999998852 1 2 1469999999999876543 1345677788888888
Q ss_pred ecccccc
Q 009198 373 FDRKLKN 379 (540)
Q Consensus 373 ~~~~~~~ 379 (540)
++++..+
T Consensus 256 ~d~~~~~ 262 (367)
T 1i8t_A 256 HEFPNFQ 262 (367)
T ss_dssp ESSSCSS
T ss_pred eccccCC
Confidence 8877443
No 32
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.82 E-value=8.8e-20 Score=180.85 Aligned_cols=357 Identities=16% Similarity=0.183 Sum_probs=216.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCee-eccceeeccCcccHHHHHHhcCCCc
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWY-ETGLHIFFGAYPNIQNLFGELGIND 132 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~-d~G~~~~~~~~~~~~~l~~~lgl~~ 132 (540)
.+..+||+|||||++||++|+.|++.|++|+|+|+++.+||.+.+.....|..+ +.|+|++......+.+++++++...
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 105 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEYLSRFTEWR 105 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHHHHTSCCEE
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHHHHHhhhcc
Confidence 346789999999999999999999999999999999999999987654567764 9999999888888999999998532
Q ss_pred ccccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCcccccccCCCCHHHH
Q 009198 133 RLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQAYVEAQDGLTVQEW 212 (540)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 212 (540)
.. .. ...... .+++..+ |.....+..++.. .+........+ .. ......+..++++|
T Consensus 106 ~~--~~-~~~~~~---~g~l~~l------P~~~~~~~~l~~~--~~~~~~~~~~l----~~-----~~~~~~~~~s~~e~ 162 (397)
T 3hdq_A 106 PY--QH-RVLASV---DGQLLPI------PINLDTVNRLYGL--NLTSFQVEEFF----AS-----VAEKVEQVRTSEDV 162 (397)
T ss_dssp EC--CC-BEEEEE---TTEEEEE------SCCHHHHHHHHTC--CCCHHHHHHHH----HH-----HCCCCSSCCBHHHH
T ss_pred cc--cc-cceEEE---CCEEEEc------CCChHHHHHhhcc--CCCHHHHHHHH----hh-----cccCCCCCcCHHHH
Confidence 11 11 111111 1222221 2222233333321 11111111111 11 01223457899999
Q ss_pred HHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhh--hc-cCcce-eeecCCCCccchhHH
Q 009198 213 MRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EK-HGSKM-AFLDGNPPERLCLPI 288 (540)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~-~g~~~-~~~~gg~~~~l~~~l 288 (540)
+.++ ++..+.+.++.+++...++.+++++++.+... +..... .. +...+ .++.+| ...+++.|
T Consensus 163 ~~~~-----------~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~R-vp~~~~~d~~yf~~~~qg~P~gG-y~~l~e~l 229 (397)
T 3hdq_A 163 VVSK-----------VGRDLYNKFFRGYTRKQWGLDPSELDASVTAR-VPTRTNRDNRYFADTYQAMPLHG-YTRMFQNM 229 (397)
T ss_dssp HHHH-----------HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGG-SCCCSSCCCBSCCCSEEEEETTC-HHHHHHHH
T ss_pred HHHh-----------cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHh-cCcccccCccchhhhheeccCCC-HHHHHHHH
Confidence 9987 67888899999999999999999999753321 100000 00 01122 367777 56666666
Q ss_pred HHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEE
Q 009198 289 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVIN 368 (540)
Q Consensus 289 ~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 368 (540)
++ ..|++|+++++|+++ ++++.+|+||+|+|...+... ...++.|.++..
T Consensus 230 ~~---~~g~~V~l~~~v~~~---------------~~~~~~d~vI~T~P~d~~~~~------------~~g~L~yrsl~~ 279 (397)
T 3hdq_A 230 LS---SPNIKVMLNTDYREI---------------ADFIPFQHMIYTGPVDAFFDF------------CYGKLPYRSLEF 279 (397)
T ss_dssp TC---STTEEEEESCCGGGT---------------TTTSCEEEEEECSCHHHHTTT------------TTCCCCEEEEEE
T ss_pred Hh---ccCCEEEECCeEEec---------------cccccCCEEEEcCCHHHHHHH------------hcCCCCCceEEE
Confidence 43 458999999999833 234679999999999775431 133567778888
Q ss_pred EEEEeccccccccCcceeec-CCceeEEeccCcccccccCCCccEEEEEeec-c-ccccCCChHHHHHHHHHHHHHhCCC
Q 009198 369 IHIWFDRKLKNTYDHLLFSR-SSLLSVYADMSLTCKEYYNPNQSMLELVFAP-A-EEWISCSDSEIIDATMKELAKLFPD 445 (540)
Q Consensus 369 i~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~e~~~~~v~~~l~~~~p~ 445 (540)
+.+.++.+...+...+.+++ +++.-+. ..++. ++. +.+++++..-+.. . +..-...+++-.+.+.++++.
T Consensus 280 ~~~~~~~~~~~~~~~vn~~d~~p~tRi~-e~k~~-~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~---- 352 (397)
T 3hdq_A 280 RHETHDTEQLLPTGTVNYPNDYAYTRVS-EFKHI-TGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL---- 352 (397)
T ss_dssp EEEEESSSCSCSSSEEECSSSSSCSEEE-EHHHH-HCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH----
T ss_pred EEEEeccccCCCCeEEEeCCCCcceEEE-eeccc-CCC-CCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH----
Confidence 88889876554433333432 2332222 22221 111 2344444443321 0 111112222211111111111
Q ss_pred ccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHH
Q 009198 446 EISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQD 521 (540)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~ 521 (540)
....+||+|+|-.....|. .|+.++.+|+.++++++..
T Consensus 353 -------------------------------------a~~~~~v~~~GRlg~y~Y~-~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 353 -------------------------------------ADAAQDVTFVGRLATYRYY-NMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp -------------------------------------HHHCTTEEECSTTTTTCCC-CHHHHHHHHHHHHHHHHC-
T ss_pred -------------------------------------HhcCCCEEEcccceEEEec-cHHHHHHHHHHHHHHHhcc
Confidence 0124689999998888875 9999999999999988753
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.72 E-value=9.8e-17 Score=163.87 Aligned_cols=64 Identities=13% Similarity=0.204 Sum_probs=56.8
Q ss_pred CccchhHHHHHHHHcCcEEEeCc---ceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNS---RVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 346 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t---~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~ 346 (540)
+..++..|.+.+++.|++|++++ +|++|.. +++.+++|++.+|+++.||+||+|+|.+. ..|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s-~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASA-GQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGG-GGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCCh-hhhcC
Confidence 56899999999999999999999 9999997 56677789999998899999999999997 56655
No 34
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.71 E-value=2e-14 Score=149.22 Aligned_cols=254 Identities=16% Similarity=0.154 Sum_probs=142.4
Q ss_pred HHHHHHhcCCCcccccccccceeecCCCCCCcccccCCCCCCCchhHHHHhhhcCCCCChhHHHHhhhchhhhHhcCc--
Q 009198 121 IQNLFGELGINDRLQWKEHSMIFAMPNKPGEFSRFDFPEVLPAPLNGILAILRNNEMLTWPEKVKFAIGLLPAIIGGQ-- 198 (540)
Q Consensus 121 ~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (540)
+.+++.++|+...+.|......+... .+.+. .+|. ....++.. ..+.+.++....+.+..... ..
T Consensus 239 lv~LL~~sgV~~yLEFk~v~~~y~~~--~G~~~------~VPa---s~~eif~s-~~Lsl~EKr~L~kFl~~~~~-~~~~ 305 (650)
T 1vg0_A 239 LIDLLIKSNVSRYAEFKNITRILAFR--EGTVE------QVPC---SRADVFNS-KQLTMVEKRMLMKFLTFCVE-YEEH 305 (650)
T ss_dssp HHHHHHHHTGGGGCCEEECCEEEEES--SSSEE------ECCC---SHHHHHHC-SSSCHHHHHHHHHHHHHHHT-GGGC
T ss_pred HHHHHHHcCCcceeeEEEccceEEec--CCCEe------ECCC---CHHHHHhC-cCCCHHHHHHHHHHHHHHHH-hccC
Confidence 45666667766666555544443332 11110 1232 23334443 66777777665543322211 11
Q ss_pred -ccccccCCCCHHHHHHHhCCCchhhhhcCCChHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHhh--hccC-ccee
Q 009198 199 -AYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQ--EKHG-SKMA 274 (540)
Q Consensus 199 -~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~~g-~~~~ 274 (540)
..+...+..++.+|++++ +....+.. ++.... .+. .....+....+..+..++. ..+| +.+.
T Consensus 306 p~~~~~~d~~S~~d~L~~~----------~ls~~L~~-~L~~~l-al~--~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~ 371 (650)
T 1vg0_A 306 PDEYRAYEGTTFSEYLKTQ----------KLTPNLQY-FVLHSI-AMT--SETTSCTVDGLKATKKFLQCLGRYGNTPFL 371 (650)
T ss_dssp HHHHHTTTTSBHHHHHTTS----------SSCHHHHH-HHHHHT-TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEE
T ss_pred hHHHhhhccCCHHHHHHHh----------CCCHHHHH-HHHHHH-hcc--CCCCCchhHHHHHHHHHHHHHHhhccCceE
Confidence 112345678999999988 66655433 322221 111 1122233333222222221 1233 4688
Q ss_pred eecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccC-CcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhH
Q 009198 275 FLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMA 353 (540)
Q Consensus 275 ~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~ 353 (540)
|+.|| .+.++++|++.+.+.|++|+++++|++|..+++ |++++|++.+|+++.|++||++.. + +|....
T Consensus 372 yp~GG-~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~-~-----lp~~~~--- 441 (650)
T 1vg0_A 372 FPLYG-QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS-Y-----LSENTC--- 441 (650)
T ss_dssp EETTC-TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG-G-----BCTTTT---
T ss_pred EeCCc-hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh-h-----cCHhHh---
Confidence 99998 899999999999999999999999999987443 788888888899999999998322 1 333221
Q ss_pred HHHHHhccCCcCeEEEEEEecccccccc----Ccc-eeecC--CceeEEe-ccCcccccccCCCccEEEEEe
Q 009198 354 YFKRLEKLVGVPVINIHIWFDRKLKNTY----DHL-LFSRS--SLLSVYA-DMSLTCKEYYNPNQSMLELVF 417 (540)
Q Consensus 354 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~----~~~-~~~~~--~~~~~~~-~~s~~~~~~~~~~~~~~~~~~ 417 (540)
.++.+..+.++.+.++++....- ..+ +++.. .-..++. ..+. ....+|.|.+++.++.
T Consensus 442 -----~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~~~g~~~~V~i~~~Ss-~~~~cP~G~~Vv~lst 507 (650)
T 1vg0_A 442 -----SRVQYRQISRAVLITDGSVLRTDADQQVSILTVPAEEPGSFAVRVIELCS-STMTCMKGTYLVHLTC 507 (650)
T ss_dssp -----TTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECCSSTTSCCEEEEEECG-GGTSSCTTCEEEEEEE
T ss_pred -----ccccccceEEEEEEecCCCCCcCCCcceEEEEccCccCCCCCEEEEEeCC-CCCCCCCCCEEEEEEe
Confidence 11234457778888888764221 111 22211 0112222 2232 5567888998887654
No 35
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.70 E-value=3.5e-16 Score=158.05 Aligned_cols=202 Identities=14% Similarity=0.174 Sum_probs=110.8
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHh-
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE- 359 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~- 359 (540)
+..++..|.+.+++.|++|+++++|++|.. +++.+++|++.+| ++.||.||+|+|.+. ..+.. .+.
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s-~~l~~----------~~g~ 239 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS-SVLAE----------MAGF 239 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH-HHHHH----------HHTC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH-HHHHH----------HcCC
Confidence 458899999999999999999999999997 4566778899888 799999999999976 22211 000
Q ss_pred ccCCcCeEEEEEEeccccccccCcceeecCCceeEEeccCcccccccCCCccEEEEEeeccccccCCChHHHHHHHHHHH
Q 009198 360 KLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKEL 439 (540)
Q Consensus 360 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~l 439 (540)
.+...+.....+.+ ++.......+++.... ..|+.+ .+.+..++.........+....+++..+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~y~~p-------~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~ 309 (405)
T 2gag_B 240 ELPIQSHPLQALVS-ELFEPVHPTVVMSNHI--HVYVSQ-------AHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAA 309 (405)
T ss_dssp CCCEEEEEEEEEEE-EEBCSCCCSEEEETTT--TEEEEE-------CTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHH
T ss_pred CCCccccceeEEEe-cCCccccCceEEeCCC--cEEEEE-------cCCCcEEEEeccCCCCccccCCCHHHHHHHHHHH
Confidence 01111111111222 2221111111111111 111110 0123333333332222232334567788899999
Q ss_pred HHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHH
Q 009198 440 AKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIV 519 (540)
Q Consensus 440 ~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~ 519 (540)
.+++|..... .+.. .|. +.+...++..+..- ..+.+|+|++..+.. .|+.-|...|+.+|+.|.
T Consensus 310 ~~~~p~l~~~-----~~~~-~w~----g~~~~t~d~~p~ig--~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 310 VELFPIFARA-----HVLR-TWG----GIVDTTMDASPIIS--KTPIQNLYVNCGWGT----GGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp HHHCGGGGGC-----EECE-EEE----EEEEEETTSCCEEE--ECSSBTEEEEECCGG----GCSTTHHHHHHHHHHHHH
T ss_pred HHhCCccccC-----Ccce-EEe----eccccCCCCCCEec--ccCCCCEEEEecCCC----chhhHHHHHHHHHHHHHh
Confidence 9999863211 1221 111 22222333221111 112578998875543 378888999999999998
Q ss_pred HH
Q 009198 520 QD 521 (540)
Q Consensus 520 ~~ 521 (540)
..
T Consensus 374 g~ 375 (405)
T 2gag_B 374 ND 375 (405)
T ss_dssp HT
T ss_pred CC
Confidence 64
No 36
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.68 E-value=1.2e-14 Score=139.08 Aligned_cols=64 Identities=28% Similarity=0.488 Sum_probs=54.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccH
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNI 121 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~ 121 (540)
++||+|||||++||+||+.|++.|++|+||||++.+||++.+.. ..+..+|.|.+++......+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~~~ 65 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDRRF 65 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcHHH
Confidence 57999999999999999999999999999999999999987754 56778888887765444333
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.66 E-value=8.3e-15 Score=146.71 Aligned_cols=205 Identities=14% Similarity=0.181 Sum_probs=113.1
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHh-
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLE- 359 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~- 359 (540)
+..++..|.+.+++.|++|+++++|++|.. +++.+.+|++.+| ++.||+||+|+|.+. ..+.+.. .+.
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~s-~~l~~~~--------g~~~ 216 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAWA-NLINAMA--------GIKT 216 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGGH-HHHHHHH--------TCCS
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchhH-HHHHHHc--------CCCc
Confidence 578899999999999999999999999997 4566767888888 799999999999986 2221100 000
Q ss_pred ccCCcCeEEEEEEeccccccccC-cceeecCCceeEEeccCcccccccCCCccEEEEE-eeccccccCCChHHHHHHHHH
Q 009198 360 KLVGVPVINIHIWFDRKLKNTYD-HLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELV-FAPAEEWISCSDSEIIDATMK 437 (540)
Q Consensus 360 ~~~~~~~~~i~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~v~~ 437 (540)
.+.-.+.-...+.++ +...... ..++... ....|+.+ .+.+ .++... ......+....+++..+.+++
T Consensus 217 ~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~y~~p-------~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 217 KIPIEPYKHQAVITQ-PIKRGTINPMVISFK-YGHAYLTQ-------TFHG-GIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCCEEEEEEEEEEC-CCSTTSSCSEEEEST-TTTEEEEC-------CSSS-CCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred CcCCCeeEeEEEEEc-cCCcccCCCeEEecC-CCeEEEEE-------eCCe-EEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 011112212223333 2111111 1222111 00112111 1122 222211 111122333345778889999
Q ss_pred HHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHH
Q 009198 438 ELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQA 517 (540)
Q Consensus 438 ~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~ 517 (540)
.+.+++|.... ..+.. .|. +.....++..+..- .....+|+|++..+.. .|+.-|...|+.+|+.
T Consensus 287 ~~~~~~p~l~~-----~~~~~-~~~----g~r~~t~d~~p~ig-~~~~~~~~~~~~G~~g----~G~~~a~~~g~~la~~ 351 (382)
T 1y56_B 287 YFTKIIPALKN-----LLILR-TWA----GYYAKTPDSNPAIG-RIEELNDYYIAAGFSG----HGFMMAPAVGEMVAEL 351 (382)
T ss_dssp HHHHHCGGGGG-----SEEEE-EEE----EEEEECTTSCCEEE-EESSSBTEEEEECCTT----CHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCC-----CCceE-EEE----eccccCCCCCcEec-cCCCCCCEEEEEecCc----chHhhhHHHHHHHHHH
Confidence 99999986321 12222 221 22223333221111 0112579998865432 4899999999999999
Q ss_pred HHHH
Q 009198 518 IVQD 521 (540)
Q Consensus 518 v~~~ 521 (540)
|...
T Consensus 352 i~~~ 355 (382)
T 1y56_B 352 ITKG 355 (382)
T ss_dssp HHHS
T ss_pred HhCC
Confidence 9865
No 38
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.66 E-value=6e-16 Score=152.03 Aligned_cols=80 Identities=33% Similarity=0.578 Sum_probs=71.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecC-CCCCcceeeecc---------CCCCeeeccceeeccCcccHHHH
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR-DVLGGKIAAWKD---------GDGDWYETGLHIFFGAYPNIQNL 124 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~-~~~gG~~~~~~~---------~~g~~~d~G~~~~~~~~~~~~~l 124 (540)
+..+||+|||||++||+||+.|++.|++|+|+|++ +.+||++.++.. ..+..++.|++++...+..+.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~~~~ 121 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLTLAL 121 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHHHHH
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHHHHH
Confidence 46789999999999999999999999999999999 999999988652 25788999999998888889999
Q ss_pred HHhcCCCccc
Q 009198 125 FGELGINDRL 134 (540)
Q Consensus 125 ~~~lgl~~~~ 134 (540)
++++|+....
T Consensus 122 ~~~lGl~~~~ 131 (376)
T 2e1m_A 122 IDKLGLKRRL 131 (376)
T ss_dssp HHHTTCCEEE
T ss_pred HHHcCCCcce
Confidence 9999987653
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.66 E-value=4.2e-15 Score=148.05 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=51.0
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCC--cEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G--~~i~a~~VI~A~~~~~ 340 (540)
+..++..|.+.++++|++|+++++|++|..++++.+ .|++.+| .++.||+||+|+|.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 568999999999999999999999999998444434 5888888 4799999999999986
No 40
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.65 E-value=5.8e-14 Score=150.86 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=53.5
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 346 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~ 346 (540)
+..++..|.+.+++.|++|+++++|++|..+ ++. +.|++.+|+++.||.||+|+|.+. ..+..
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~i~Ad~VVlAtG~~s-~~l~~ 478 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDC-WLLNFAGDQQATHSVVVLANGHQI-SRFSQ 478 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCGGGG-GCSTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCe-EEEEECCCCEEECCEEEECCCcch-hcccc
Confidence 5789999999999999999999999999984 444 478888887899999999999986 44443
No 41
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.63 E-value=4.2e-15 Score=148.85 Aligned_cols=200 Identities=15% Similarity=0.150 Sum_probs=111.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhc
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 360 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~ 360 (540)
+..+...|.+.+.+.|++|+++++|++|.. +++.+ .|++.+| ++.||.||+|+|.+. ..+++... ..
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~-~v~~~~g-~~~a~~vV~A~G~~s-~~l~~~~~---------~~ 229 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVER-DGEAL-FIKTPSG-DVWANHVVVASGVWS-GMFFKQLG---------LN 229 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEEC-SSSSE-EEEETTE-EEEEEEEEECCGGGT-HHHHHHTT---------CC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEE-ECCEE-EEEcCCc-eEEcCEEEECCChhH-HHHHHhcC---------CC
Confidence 467899999999999999999999999987 44555 6888888 799999999999975 22221100 00
Q ss_pred cCCcCeEEEEEEeccccccccCcceeecCCceeEEeccCcccccccCCCccEEEEEeeccccccCCChHHHHHHHHHHHH
Q 009198 361 LVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 440 (540)
Q Consensus 361 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~l~ 440 (540)
+...+.....+.++.+. ......++.+ ..|..+ .+.+..++.... ....+....+++..+.+++.+.
T Consensus 230 ~~~~~~~g~~~~~~~~~-~~~~~~~~~~----~~~~~p-------~~~g~~~vG~~~-~~~~~~~~~~~~~~~~l~~~~~ 296 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDD-IPLTKTLYHD----HCYIVP-------RKSGRLVVGATM-KPGDWSETPDLGGLESVMKKAK 296 (382)
T ss_dssp CCCEEEEEEEEEEECCS-SCCCSEEEET----TEEEEE-------CTTSEEEEECCC-EETCCCCSCCHHHHHHHHHHHH
T ss_pred CceeccceEEEEECCCC-CCccceEEcC----CEEEEE-------cCCCeEEEeecc-cccCCCCCCCHHHHHHHHHHHH
Confidence 11112222233343221 0111122211 011110 012222222211 1123434456778899999999
Q ss_pred HhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHH
Q 009198 441 KLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQ 520 (540)
Q Consensus 441 ~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~ 520 (540)
+++|.... ..+.. .|. +.+...++..+... .....+|+|+++.+.. .|+..|..+|+.+|+.|+.
T Consensus 297 ~~~p~l~~-----~~~~~-~w~----g~~~~t~d~~p~ig-~~~~~~~l~~~~G~~g----~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 297 TMLPAIQN-----MKVDR-FWA----GLRPGTKDGKPYIG-RHPEDSRILFAAGHFR----NGILLAPATGALISDLIMN 361 (382)
T ss_dssp HHCGGGGG-----SEEEE-EEE----EEEEECSSSCCEEE-EETTEEEEEEEECCSS----CTTTTHHHHHHHHHHHHTT
T ss_pred HhCCCcCC-----Cceee-EEE----EecccCCCCCcEec-cCCCcCCEEEEEcCCc----chHHHhHHHHHHHHHHHhC
Confidence 99986321 12221 221 12222333211110 0112578999876533 4888999999999999875
Q ss_pred H
Q 009198 521 D 521 (540)
Q Consensus 521 ~ 521 (540)
.
T Consensus 362 ~ 362 (382)
T 1ryi_A 362 K 362 (382)
T ss_dssp C
T ss_pred C
Confidence 3
No 42
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.63 E-value=2.5e-15 Score=150.48 Aligned_cols=57 Identities=19% Similarity=0.123 Sum_probs=50.9
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+++..|.+.++++|++|+++++|++|..+ ++. +.|++.+| ++.||+||+|+|.+.
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCC-EEEcCEEEECCChhH
Confidence 6789999999999999999999999999974 444 57889888 799999999999987
No 43
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.62 E-value=1.8e-13 Score=147.10 Aligned_cols=63 Identities=13% Similarity=0.121 Sum_probs=52.5
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc-EEEcCEEEEccCHHHHhhcCC
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDILKLQLP 346 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~-~i~a~~VI~A~~~~~~~~ll~ 346 (540)
+..++..|.+.+++.|++|+++++|++|..+++ .+ .|++.+|+ ++.||.||+|+|.+. ..++.
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v-~V~t~~G~~~i~Ad~VVlAtG~~s-~~l~~ 474 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-QW-QLTFGQSQAAKHHATVILATGHRL-PEWEQ 474 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-SE-EEEEC-CCCCEEESEEEECCGGGT-TCSTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-eE-EEEeCCCcEEEECCEEEECCCcch-hcccc
Confidence 578999999999999999999999999998444 44 68888886 799999999999996 44443
No 44
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.62 E-value=3.5e-14 Score=142.55 Aligned_cols=204 Identities=12% Similarity=0.069 Sum_probs=111.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhc
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 360 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~ 360 (540)
+.+++..|.+.+++.|++|+++++|++|+.+++ .+ .|++.+| ++.||.||+|+|.+. ..+++.... .
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~-~v~~~~g-~~~a~~vV~A~G~~~-~~l~~~~g~---------~ 215 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISPD-SV-KIETANG-SYTADKLIVSMGAWN-SKLLSKLNL---------D 215 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-CE-EEEETTE-EEEEEEEEECCGGGH-HHHGGGGTE---------E
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCC-eE-EEEeCCC-EEEeCEEEEecCccH-HHHhhhhcc---------C
Confidence 568999999999999999999999999997444 33 5788777 799999999999987 444432110 0
Q ss_pred cCCcCeEEEEEEecccc--cc---ccCcceeecCCceeEEeccCcccccccCCCccEEEEEee-----ccccccCCC--h
Q 009198 361 LVGVPVINIHIWFDRKL--KN---TYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFA-----PAEEWISCS--D 428 (540)
Q Consensus 361 ~~~~~~~~i~l~~~~~~--~~---~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~ 428 (540)
+...+.-...+.++.+. +. ....++..... ...|..+. +.+..++..... ....+.... +
T Consensus 216 ~pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~y~~p~-------~~g~~~~iG~~~~~~~~~~~~~~~~~~~~ 287 (389)
T 2gf3_A 216 IPLQPYRQVVGFFESDESKYSNDIDFPGFMVEVPN-GIYYGFPS-------FGGCGLKLGYHTFGQKIDPDTINREFGVY 287 (389)
T ss_dssp CCCEEEEEEEEEECCCHHHHBGGGTCCEEEEEETT-EEEEEECB-------STTCCEEEEESSCCEECCTTTCCCCTTSS
T ss_pred CceEEEEEEEEEEecCcccccccccCCEEEEeCCC-CcEEEcCC-------CCCCcEEEEEcCCCCccCcccccCccCCC
Confidence 11122223334444321 00 00001111000 01121111 122123222111 111121222 4
Q ss_pred HHHHHHHHHHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCCCCCCCCCCCeEEecccccCCCCCchHHHH
Q 009198 429 SEIIDATMKELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCRPLQRSPVEGFYLAGDYTKQKYLASMEGAV 508 (540)
Q Consensus 429 e~~~~~v~~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~aG~~~~~~~~~~~~ga~ 508 (540)
++..+.+++.+.+++|.... .+.. .| .+.+...++..+.... ....+|+|++..+.. .|+.-|.
T Consensus 288 ~~~~~~l~~~~~~~~P~l~~------~~~~-~w----~g~r~~t~D~~p~ig~-~~~~~~l~~a~G~~g----~G~~~ap 351 (389)
T 2gf3_A 288 PEDESNLRAFLEEYMPGANG------ELKR-GA----VCMYTKTLDEHFIIDL-HPEHSNVVIAAGFSG----HGFKFSS 351 (389)
T ss_dssp HHHHHHHHHHHHHHCGGGCS------CEEE-EE----EEEEEECTTSCCEEEE-ETTEEEEEEEECCTT----CCGGGHH
T ss_pred HHHHHHHHHHHHHhCCCCCC------CceE-EE----EEEeccCCCCCeEEcc-CCCCCCEEEEECCcc----ccccccH
Confidence 55568999999999996321 1222 12 1233334442221111 112578998875533 3788889
Q ss_pred HHHHHHHHHHHHH
Q 009198 509 LSGKLCAQAIVQD 521 (540)
Q Consensus 509 ~sg~~aA~~v~~~ 521 (540)
..|+.+|+.|...
T Consensus 352 ~~g~~la~~i~~~ 364 (389)
T 2gf3_A 352 GVGEVLSQLALTG 364 (389)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999864
No 45
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.61 E-value=6.1e-14 Score=141.15 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=48.6
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+..++..|.+.+++.|++|+++++|++|+.+ ++.+ .|++.+| ++.||.||+|+|.+.
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v-~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGV-SVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeE-EEEECCC-EEEcCEEEEcCCcCh
Confidence 5678899999999999999999999999874 4444 4777777 799999999999985
No 46
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.58 E-value=4.8e-14 Score=140.60 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=52.7
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCC
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLP 346 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~ 346 (540)
+.+++..|.+.+++.|++|+++++|++|+.+ ++.+ .|++.+| ++.||+||+|+|.+. ..|++
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDGV-TIETADG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSE-EEEESSC-EEEEEEEEECCGGGG-GGTST
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCEE-EEEECCC-eEEcCEEEEcCCccH-Hhhcc
Confidence 5689999999999999999999999999974 3343 5888888 599999999999997 56655
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.57 E-value=2.6e-14 Score=146.23 Aligned_cols=63 Identities=22% Similarity=0.247 Sum_probs=52.7
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEc--------------cCCcEEEEEEcCCcEE--EcCEEEEccCHHHHhhc
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELN--------------DDGTVKNFLLTNGNVI--DGDAYVFATPVDILKLQ 344 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~--------------~~~~~~~V~~~~G~~i--~a~~VI~A~~~~~~~~l 344 (540)
+.+++..|.+.+++.|++|+++++|++|..+ +++.+++|.+.+| ++ .||.||+|+|.+. ..|
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s-~~l 257 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS-NRL 257 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH-HHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH-HHH
Confidence 5689999999999999999999999999862 3445667889888 68 9999999999986 344
Q ss_pred C
Q 009198 345 L 345 (540)
Q Consensus 345 l 345 (540)
+
T Consensus 258 ~ 258 (448)
T 3axb_A 258 L 258 (448)
T ss_dssp H
T ss_pred H
Confidence 3
No 48
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.50 E-value=6.4e-12 Score=129.69 Aligned_cols=58 Identities=28% Similarity=0.490 Sum_probs=51.9
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.|.+.+++.|++|+++++|++|.. +++.+++|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 56788899999999999999999999987 56677789999998899999999999875
No 49
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.49 E-value=1.6e-12 Score=136.18 Aligned_cols=62 Identities=6% Similarity=0.029 Sum_probs=51.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc---CCc--EEEcCEEEEccCHHHHhhc
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~---~G~--~i~a~~VI~A~~~~~~~~l 344 (540)
+.+++..+++.+.+.|++|+++++|++|.. +++++++|++. +|+ ++.|+.||+|+|+|+ ..+
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws-~~l 253 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV-DKV 253 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH-HHH
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH-HHH
Confidence 568889999999999999999999999998 45667777753 343 699999999999987 444
No 50
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.47 E-value=3.8e-13 Score=140.66 Aligned_cols=59 Identities=20% Similarity=0.203 Sum_probs=51.4
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC---C--cEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---G--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~---G--~~i~a~~VI~A~~~~~ 340 (540)
+.+++..|++.+.++|++|+++++|++|.. +++++++|++.+ | .++.|+.||+|+|+++
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 578999999999999999999999999998 566777788764 3 3799999999999987
No 51
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.43 E-value=6.2e-13 Score=135.62 Aligned_cols=59 Identities=24% Similarity=0.453 Sum_probs=51.8
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+.+.|.+.+++.|++|+++++|++|.. +++.+++|++.+|+++.||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 467888999999999999999999999987 46666789999997799999999998865
No 52
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.42 E-value=2.7e-11 Score=121.66 Aligned_cols=58 Identities=10% Similarity=0.122 Sum_probs=47.7
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE---cCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~---~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+.|++|+++++|++|.. +++.+.+|++ .+++++.||.||.|+|.+.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEE-eCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 46777888888889999999999999997 4666666776 3456899999999999864
No 53
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.42 E-value=2.2e-11 Score=122.14 Aligned_cols=58 Identities=12% Similarity=0.163 Sum_probs=44.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc-CC--cEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~-~G--~~i~a~~VI~A~~~~~ 340 (540)
..+-..|.+.+.+.|++++++++|+++.. +++.++++... +| .+++||.||-|.|...
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 35566788888889999999999999987 56666555443 33 3689999999999854
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.41 E-value=1.3e-11 Score=125.01 Aligned_cols=60 Identities=17% Similarity=0.159 Sum_probs=50.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc--EEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~--~i~a~~VI~A~~~~~ 340 (540)
...+...|.+.+.+.|++|+++++|++|..++++..+.|.+.+|+ ++.||.||.|+|.+.
T Consensus 105 r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 105 RGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 356778888888888999999999999998555555667788897 699999999999864
No 55
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.40 E-value=1.5e-13 Score=135.84 Aligned_cols=189 Identities=12% Similarity=0.016 Sum_probs=105.9
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhc
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 360 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~ 360 (540)
+.+++..|.+.++++|++|+. ++|++|+.. + .+.||.||+|+|.+. ..|++..
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~------------~-~~~a~~VV~A~G~~s-~~l~~~~------------ 193 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEEV------------A-REGADVIVNCTGVWA-GALQRDP------------ 193 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHHH------------H-HTTCSEEEECCGGGG-GGTSCCT------------
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHHh------------h-cCCCCEEEECCCcCh-HhhcCCC------------
Confidence 678999999999999999998 899888531 1 267999999999998 5665531
Q ss_pred cCCcCeEEEEEEeccccccccCcceeecCC----ceeEEeccCcccccccCCCccEEEEEeeccccccCCChHHHHHHHH
Q 009198 361 LVGVPVINIHIWFDRKLKNTYDHLLFSRSS----LLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATM 436 (540)
Q Consensus 361 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~ 436 (540)
.-.+.-...+.++.+. ....++...+ -...|. .|....++.........+....+++..+.++
T Consensus 194 -~l~p~rg~~~~~~~~~---~~~~~~~~~~~~~~~~~~y~---------~p~~~~~~iGg~~~~~~~~~~~~~~~~~~l~ 260 (351)
T 3g3e_A 194 -LLQPGRGQIMKVDAPW---MKHFILTHDPERGIYNSPYI---------IPGTQTVTLGGIFQLGNWSELNNIQDHNTIW 260 (351)
T ss_dssp -TCEEEEEEEEEEECTT---CCSEEEECCTTTCTTCSCEE---------EECSSCEEEECCCEETCCCCSCCHHHHHHHH
T ss_pred -ceeecCCcEEEEeCCC---cceEEEeccccCCCCceeEE---------EeCCCcEEEeeeeecCCCCCCCCHHHHHHHH
Confidence 1112222333444321 1111111100 000111 1111122222111112343344677788999
Q ss_pred HHHHHhCCCccccccccceEEEEEEecCCCceeccCCCCCCCC-C-CCCCC-CCCeEEecccccCCCCCchHHHHHHHHH
Q 009198 437 KELAKLFPDEISADQSKAKIVKYHVVKTPRSVYKTIPNCEPCR-P-LQRSP-VEGFYLAGDYTKQKYLASMEGAVLSGKL 513 (540)
Q Consensus 437 ~~l~~~~p~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~-~~~~~-~~~l~~aG~~~~~~~~~~~~ga~~sg~~ 513 (540)
+.+.+++|.... ..+.. .|. +.....++ .+.. + .-..+ .+|+|++..+.. .|+.-|...|+.
T Consensus 261 ~~~~~~~P~l~~-----~~i~~-~w~----G~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~g----~G~~~ap~~g~~ 325 (351)
T 3g3e_A 261 EGCCRLEPTLKN-----ARIIG-ERT----GFRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHGG----YGLTIHWGCALE 325 (351)
T ss_dssp HHHHHHCGGGGG-----CEEEE-EEE----EEEEECSS-CEEEEEEECCSSSCEEEEEEECCTT----CHHHHHHHHHHH
T ss_pred HHHHHhCCCccC-----CcEee-eeE----eeCCCCCC-ccceeeeccCCCCCCeEEEEeCCCc----chHhhhHHHHHH
Confidence 999999986321 12222 221 22223333 1100 0 01122 578998876543 489999999999
Q ss_pred HHHHHHHHHhH
Q 009198 514 CAQAIVQDYVL 524 (540)
Q Consensus 514 aA~~v~~~l~~ 524 (540)
.|+.|...++.
T Consensus 326 la~li~~~~~~ 336 (351)
T 3g3e_A 326 AAKLFGRILEE 336 (351)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999988764
No 56
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.40 E-value=5.7e-12 Score=132.59 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=49.7
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc--CCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~--~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+.|++|+++++|++|..++++++++|.+. +|+ ++.|+.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 57888999999999999999999999998444788777765 675 689999999998854
No 57
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.39 E-value=1.1e-11 Score=128.35 Aligned_cols=58 Identities=21% Similarity=0.174 Sum_probs=50.0
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc---CCc--EEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~---~G~--~i~a~~VI~A~~~~~ 340 (540)
+.+++..|.+.+.++|++|+++++|++|..+ + .+++|++. +|+ ++.|+.||+|+|++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 6789999999999999999999999999873 3 45678773 575 799999999999987
No 58
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.39 E-value=5.3e-12 Score=127.38 Aligned_cols=55 Identities=20% Similarity=0.279 Sum_probs=44.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+ ++|+++++|++|+.+ ++.+ .|++.+|+++.||.||.|.|.+.
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v-~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED-ADGV-TVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcE-EEEEcCCCEEeeCEEEECCCcCh
Confidence 4566777777766 899999999999974 4433 58899998999999999999864
No 59
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.39 E-value=5.2e-12 Score=130.97 Aligned_cols=58 Identities=26% Similarity=0.326 Sum_probs=49.4
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCC-c--EEEcC-EEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-N--VIDGD-AYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G-~--~i~a~-~VI~A~~~~~ 340 (540)
.++..|.+.+++.|++|+++++|++|..++++++++|.+.++ + +|.|+ .||+|+|.+.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 789999999999999999999999999854788888877544 2 58995 9999998864
No 60
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.36 E-value=8e-12 Score=131.24 Aligned_cols=59 Identities=27% Similarity=0.295 Sum_probs=49.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc--CCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~--~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+++.|++|+++++|++|..++++++++|.+. +|+ ++.|+.||+|+|.+.
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 56888999999999999999999999998433788777765 675 689999999998865
No 61
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.36 E-value=2.3e-11 Score=120.61 Aligned_cols=202 Identities=12% Similarity=0.095 Sum_probs=103.9
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhc
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEK 360 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~ 360 (540)
+.+++..|.+.++++|++|+. ++|++|.. + . + .||.||+|+|.+. ..+++....
T Consensus 141 p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~--~------~-----~-~a~~VV~A~G~~s-~~l~~~~~~---------- 194 (363)
T 1c0p_A 141 APKYCQYLARELQKLGATFER-RTVTSLEQ--A------F-----D-GADLVVNATGLGA-KSIAGIDDQ---------- 194 (363)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCSBGGG--T------C-----S-SCSEEEECCGGGG-GTSBTTCCT----------
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEcccHhh--c------C-----c-CCCEEEECCCcch-hhccCcccC----------
Confidence 688999999999999999998 99999864 1 0 2 7999999999998 555542111
Q ss_pred cCCcCeEEEEEEeccccccccCcceeecCCceeEEeccCcccccccCCCccEEEEEeeccccccCCChHHHHHHHHHHHH
Q 009198 361 LVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKEYYNPNQSMLELVFAPAEEWISCSDSEIIDATMKELA 440 (540)
Q Consensus 361 ~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~v~~~l~ 440 (540)
.-.+.-...+.++.+. ....+...... ...|+.+ .+.+..++..+.. ...|....+++..+.+++.+.
T Consensus 195 -~~~p~rg~~~~~~~~~--~~~~~~~~~~~-~~~y~~p-------~~~g~~~iG~t~~-~~~~~~~~~~~~~~~l~~~~~ 262 (363)
T 1c0p_A 195 -AAEPIRGQTVLVKSPC--KRCTMDSSDPA-SPAYIIP-------RPGGEVICGGTYG-VGDWDLSVNPETVQRILKHCL 262 (363)
T ss_dssp -TEEEEEEEEEEEECCC--CCCEEECSCTT-CCEEEEE-------ETTTEEEEECCCE-ETCCCCSCCHHHHHHHHHHHH
T ss_pred -CccccCCeEEEEeCCc--ccceEeeccCC-CcEEEEE-------cCCCEEEEEeeec-cCCCCCCCCHHHHHHHHHHHH
Confidence 1112222233343321 11111000000 0011111 0122222322221 123433445677889999999
Q ss_pred HhCCCcccccc-ccceEEEEEE---ecCCCceec--c--C----C--CC--CCCCCCCCCCC--CCeEEecccccCCCCC
Q 009198 441 KLFPDEISADQ-SKAKIVKYHV---VKTPRSVYK--T--I----P--NC--EPCRPLQRSPV--EGFYLAGDYTKQKYLA 502 (540)
Q Consensus 441 ~~~p~~~~~~~-~~~~~~~~~~---~~~p~~~~~--~--~----~--~~--~~~~~~~~~~~--~~l~~aG~~~~~~~~~ 502 (540)
+++|....... ....+..... -.+|.+.+- . . + +. ........... +|+|++..+.. .
T Consensus 263 ~~~P~l~~~~~~~~~~i~~~w~G~rp~t~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g----~ 338 (363)
T 1c0p_A 263 RLDPTISSDGTIEGIEVLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSS----A 338 (363)
T ss_dssp HHCGGGSSSSSGGGCEEEEEEEEEEEEETTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTT----C
T ss_pred HhCccccCCcccccceEeeceEEECCCCCCCceeEEEecccccccccCccccccccccccccccceEEEecCCCC----c
Confidence 99996421000 0012222211 112222111 0 0 0 00 00000001123 68888875543 4
Q ss_pred chHHHHHHHHHHHHHHHHHHhH
Q 009198 503 SMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 503 ~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
|+.-+...|+.+|+.|...++.
T Consensus 339 G~~~a~~~g~~~a~li~~~l~~ 360 (363)
T 1c0p_A 339 GYQQSWGAAEDVAQLVDEAFQR 360 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chheeccHHHHHHHHHHHHHHh
Confidence 8999999999999999987753
No 62
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.36 E-value=3.4e-12 Score=128.21 Aligned_cols=57 Identities=14% Similarity=0.257 Sum_probs=49.1
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+.+.|.+.+.+.|++|+++++|++|..+ ++. +.|.+.+| ++.||.||+|+|.+.
T Consensus 131 ~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 131 AKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASG-FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCc-EEEeeEEEECCCCcc
Confidence 4678889999999999999999999999874 333 46888888 899999999999875
No 63
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.36 E-value=2.4e-12 Score=141.48 Aligned_cols=58 Identities=24% Similarity=0.235 Sum_probs=52.3
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+..++..|.+.+.++|++|+++++|++|.. +++.+++|.+.+| ++.||+||+|+|.+.
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 678999999999999999999999999997 4566777889888 799999999999987
No 64
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.35 E-value=1.2e-10 Score=121.73 Aligned_cols=63 Identities=19% Similarity=0.242 Sum_probs=48.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCC---cEEEEEEcCC---cEEEcCEEEEccCHHH-HhhcC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDG---TVKNFLLTNG---NVIDGDAYVFATPVDI-LKLQL 345 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~---~~~~V~~~~G---~~i~a~~VI~A~~~~~-~~~ll 345 (540)
..+...|.+.+.+.|++|+++++|++|+.++++ .+ .|++.++ ++++||.||.|.|.+. +.+.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v-~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV-TARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE-EEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE-EEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 467778889999999999999999999975441 33 4666665 6899999999999864 34444
No 65
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.35 E-value=8.9e-11 Score=123.04 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=48.3
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc-CC--cEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~-~G--~~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+.|++|+.+++|++|.. +++..++|++. +| +++.||.||.|+|.+.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~-~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDL-SDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEC-CSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEE-cCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 46777888888889999999999999987 34555678887 66 5799999999999864
No 66
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.31 E-value=1.2e-10 Score=121.73 Aligned_cols=63 Identities=14% Similarity=0.166 Sum_probs=48.3
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE--cCC-cEEEcCEEEEccCHHH-HhhcCC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNG-NVIDGDAYVFATPVDI-LKLQLP 346 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~--~~G-~~i~a~~VI~A~~~~~-~~~ll~ 346 (540)
..+...|.+.+.+.|++|+++++|++|+.++++ + .|++ .+| ++++||.||.|.|.+. +.+.+.
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~-v-~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA-V-EVTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC-E-EEEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe-E-EEEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 456777888888889999999999999874444 3 3555 778 6899999999998853 344443
No 67
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.30 E-value=5e-10 Score=115.50 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=48.2
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc---EEEcCEEEEccCHHH-HhhcCC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQLP 346 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~---~i~a~~VI~A~~~~~-~~~ll~ 346 (540)
..+...|.+.+.+.|++|+++++|++|+.+++ .+ .|++.+|+ +++||.||.|.|.+. +.+.+.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GV-TVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EE-EEEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eE-EEEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 35667788888888999999999999997444 44 47776664 799999999999864 344553
No 68
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.30 E-value=3.5e-10 Score=118.87 Aligned_cols=59 Identities=24% Similarity=0.289 Sum_probs=49.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC------C---------cEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN------G---------NVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~------G---------~~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+++.|++|+++++|++|..++++.+++|++.+ | .+++||.||.|.|.+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 467788889998899999999999999985567777788763 3 5799999999999864
No 69
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.28 E-value=1.5e-09 Score=111.88 Aligned_cols=63 Identities=11% Similarity=-0.011 Sum_probs=48.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc---EEEcCEEEEccCHHH-HhhcCC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN---VIDGDAYVFATPVDI-LKLQLP 346 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~---~i~a~~VI~A~~~~~-~~~ll~ 346 (540)
..+...|.+.+.+.|++|+++++|++|+.+++ .+ .|++.+|+ +++||.||.|.|.+. +.+.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v-~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGD-HV-VVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSS-CE-EEEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EE-EEEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 45677788888888999999999999998444 44 47777764 799999999999864 345553
No 70
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.22 E-value=7.9e-10 Score=112.93 Aligned_cols=58 Identities=21% Similarity=0.138 Sum_probs=47.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc---CCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~---~G~--~i~a~~VI~A~~~~~ 340 (540)
..+.+.|.+.+.+.|++|+++++|++|.. +++.+++|++. +|+ ++.||.||.|+|.+.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 45777888888889999999999999987 55666556654 675 799999999999865
No 71
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.21 E-value=2.1e-10 Score=120.45 Aligned_cols=59 Identities=29% Similarity=0.348 Sum_probs=48.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc--CCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~--~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+++.|++|+++++|++|..++++++++|.+. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 46888999999999999999999999987432788787765 664 689999999998754
No 72
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.20 E-value=1.3e-10 Score=116.24 Aligned_cols=59 Identities=14% Similarity=0.106 Sum_probs=49.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEcc---CCcEEEEEEcCCcEEEcCEEEEccCHHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELND---DGTVKNFLLTNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~---~~~~~~V~~~~G~~i~a~~VI~A~~~~~~ 341 (540)
...+.+.|.+.+++.|++|+++++|++|..++ ++. +.|++.+| ++.||+||+|+|.+..
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEECCCCccC
Confidence 56788899999999999999999999998741 344 35888877 7999999999988763
No 73
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.19 E-value=3.5e-10 Score=118.71 Aligned_cols=59 Identities=17% Similarity=0.068 Sum_probs=49.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~---~~G~--~i~a~~VI~A~~~~~ 340 (540)
..++..|.+.+.+.|++|+++++|++|..++++++++|.. .+|+ ++.|+.||+|||.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 5788889999999999999999999998743677877775 4564 589999999999865
No 74
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.19 E-value=6.5e-10 Score=111.46 Aligned_cols=63 Identities=8% Similarity=0.059 Sum_probs=47.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE-cCCc--EEEcCEEEEccCHHH-HhhcC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL-TNGN--VIDGDAYVFATPVDI-LKLQL 345 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~-~~G~--~i~a~~VI~A~~~~~-~~~ll 345 (540)
..+...|.+.+.+.|++|+++++|++|+.++++.+ .|++ .+|+ ++.||.||.|.|.+. +.+.+
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGS
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhc
Confidence 34666788888888999999999999986433333 4666 6886 699999999999864 33444
No 75
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.17 E-value=1.2e-11 Score=124.41 Aligned_cols=57 Identities=16% Similarity=0.224 Sum_probs=45.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCccee---------EEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQ---------KIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~---------~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+..++..|.+.+++.|++|+++++|+ +|.. +++.+ +|++.+| ++.||.||+|+|.+.
T Consensus 171 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 171 PGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV-TNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe-eCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 56799999999999999999999999 8876 34444 6888777 799999999999986
No 76
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.16 E-value=4.2e-09 Score=112.01 Aligned_cols=66 Identities=12% Similarity=0.151 Sum_probs=47.9
Q ss_pred ccchhHHHHHHHHcCc--EEEeCcceeEEEEccC--CcEEEEEEc------CC--cEEEcCEEEEccCHHH-HhhcCCC
Q 009198 282 ERLCLPIVEHIQSLGG--EVRLNSRVQKIELNDD--GTVKNFLLT------NG--NVIDGDAYVFATPVDI-LKLQLPE 347 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~--~~~~~V~~~------~G--~~i~a~~VI~A~~~~~-~~~ll~~ 347 (540)
..+...|.+.+.+.|+ +|+++++|++|+.+++ +..+.|++. +| ++++||.||.|.|.+. +.+.+..
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~ 219 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGR 219 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhCC
Confidence 3566778888888887 9999999999997542 222345554 46 4799999999999864 4455543
No 77
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.16 E-value=3.3e-10 Score=114.23 Aligned_cols=44 Identities=16% Similarity=0.266 Sum_probs=37.4
Q ss_pred CcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 296 GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 296 G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+|+++++|++++..+++.+ .|++.+|++++||.||-|-|.+.
T Consensus 123 ~~~v~~~~~v~~~~~~~~~~v-~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 123 ANTIQWNKTFVRYEHIENGGI-KIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp TTTEECSCCEEEEEECTTSCE-EEEETTSCEEEESEEEECCCTTC
T ss_pred cceEEEEEEEEeeeEcCCCeE-EEEECCCCEEEeeEEEECCCCCc
Confidence 457999999999987666655 58999999999999999998854
No 78
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.14 E-value=2.3e-10 Score=118.91 Aligned_cols=59 Identities=14% Similarity=0.023 Sum_probs=45.3
Q ss_pred ccchhHHHHHHHH-cCcEEEeCcceeEEEEccCC------cEEEEEEc---CCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDG------TVKNFLLT---NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~------~~~~V~~~---~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+ .|++|++++.|++|..++++ ++.+|.+. +|+ ++.|+.||+|+|.+.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 5678888888888 69999999999999873334 77777765 564 689999999998865
No 79
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.13 E-value=5.6e-10 Score=118.22 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=48.9
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~---~~G~--~i~a~~VI~A~~~~~ 340 (540)
..++..|.+.+.+.|++|++++.|++|.. +++++.+|.+ .+|+ .+.|+.||+|||.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 46888999999999999999999999987 5677777765 4675 489999999998865
No 80
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.10 E-value=6.9e-10 Score=116.66 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=49.2
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~---~~G~--~i~a~~VI~A~~~~~ 340 (540)
..++..|.+.+.+.|++|++++.|++|.. +++++.+|.+ .+|+ ++.|+.||+|||.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 47888999999889999999999999987 5677777776 3665 689999999999876
No 81
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.07 E-value=1.1e-09 Score=109.26 Aligned_cols=54 Identities=26% Similarity=0.358 Sum_probs=46.3
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+.|++|+++++|++|+. ++ .|++.+|+++.||.||.|+|.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccH
Confidence 46777888888888999999999999985 44 47788898899999999999854
No 82
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.07 E-value=6.4e-10 Score=111.74 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=51.4
Q ss_pred CccchhHHHHHHHHc-CcEEEeCcceeEEEEccCCcEE-EEEEcCCcEEEcCEEEEccCHHH-HhhcCC
Q 009198 281 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVK-NFLLTNGNVIDGDAYVFATPVDI-LKLQLP 346 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~-~V~~~~G~~i~a~~VI~A~~~~~-~~~ll~ 346 (540)
...+.+.|.+.+.+. |++|+++++|++|+.+++ .++ .|++.+|+++.||.||.|+|.+. +.+.+.
T Consensus 106 r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 106 CESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-HAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-ceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 356778888888888 899999999999997444 442 58888998899999999999854 344443
No 83
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.07 E-value=3.5e-09 Score=109.97 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=51.6
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+...|.+.+.+.|++++.+ +|++|..++++.+++|++.+|+++.||.||.|+|.+.
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 3578888999999999999999 9999987566777789999998899999999999975
No 84
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.07 E-value=1.2e-08 Score=102.36 Aligned_cols=39 Identities=28% Similarity=0.344 Sum_probs=35.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
.++||+|||||++|+++|+.|++.|++|+|+|+++..+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREA 63 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccc
Confidence 467999999999999999999999999999999876654
No 85
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.05 E-value=8.9e-10 Score=114.29 Aligned_cols=58 Identities=16% Similarity=0.116 Sum_probs=47.0
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE--cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~--~~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+.|++|+++++|++|.. +++.+.+|++ .+|+ ++.||.||.|+|.+.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 46777888888889999999999999998 5666555544 4574 799999999999864
No 86
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.05 E-value=1.1e-09 Score=104.21 Aligned_cols=40 Identities=33% Similarity=0.425 Sum_probs=36.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCceEEEecCCCCCcc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLGGK 95 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~~~gG~ 95 (540)
.++||+|||||++|+++|+.|++. |.+|+|+|+++.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 457999999999999999999997 9999999999887764
No 87
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.05 E-value=2.5e-09 Score=111.69 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=51.1
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+...|.+.+.+.|++++.+ +|++|..++++.++.|++.+|+++.||.||.|+|.+.
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 3578888999999999999999 8999987556666778899998899999999999975
No 88
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.01 E-value=4.4e-09 Score=105.44 Aligned_cols=62 Identities=23% Similarity=0.283 Sum_probs=45.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 132 (540)
..+||+|||||++|+++|+.|++.|++|+|+|+++..... .|.-+ ...+...++++++|+..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-------------~~~g~--~l~~~~~~~l~~~g~~~ 65 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSG-------------FGTGI--VVQPELVHYLLEQGVEL 65 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCC-------------CSCEE--ECCHHHHHHHHHTTCCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc-------------ccccc--ccChhHHHHHHHcCCcc
Confidence 4579999999999999999999999999999998653110 01000 11345677888888764
No 89
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.01 E-value=1.3e-09 Score=117.18 Aligned_cols=45 Identities=33% Similarity=0.530 Sum_probs=41.1
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceee
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~ 98 (540)
.+..+||+|||||++|++||+.|+++|++|+|+|+++..||....
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 456789999999999999999999999999999999999997654
No 90
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.01 E-value=1.9e-09 Score=106.31 Aligned_cols=56 Identities=14% Similarity=-0.076 Sum_probs=43.4
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+...+.+.+++.|++++++++|++|.. +++.+.+|++.+| ++.+|+||+|+|.+.
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~-~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSH-FGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEE-ETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEE-CCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 3444556666777899999999999987 4444323888888 899999999999866
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.01 E-value=1.4e-09 Score=113.31 Aligned_cols=42 Identities=31% Similarity=0.461 Sum_probs=38.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
..++||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw 60 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW 60 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 356899999999999999999999999999999999888754
No 92
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.00 E-value=4.8e-10 Score=115.51 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=48.1
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.+++.|++|+++++|++|+. +++.+ .|++.+|+++.||.||+|+|...
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~-~~~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQS-TENCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-CSSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEe-eCCEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 35677888888999999999999999987 44444 68889998899999999999754
No 93
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.99 E-value=1.6e-09 Score=112.47 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=45.3
Q ss_pred cchhHHHHHHHHcCc--EEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGG--EVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+...+.+.+.+.|+ .|+++++|+++..++++..+.|++.+|+++.||+||+|+|...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 344445555666676 8999999999998655455679999998899999999999754
No 94
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.98 E-value=5.9e-09 Score=109.68 Aligned_cols=58 Identities=21% Similarity=0.158 Sum_probs=48.1
Q ss_pred ccchhHHHHHHHHcC-cEEEeCcceeEEEEccCCcEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDGTVKNFLL---TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~~~~~V~~---~~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+.| ++|++++.|++|.. +++++++|.. .+|+ ++.|+.||+|+|.+.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILV-DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 467888999988888 99999999999987 4667767653 5675 689999999999865
No 95
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.98 E-value=2.8e-10 Score=99.86 Aligned_cols=106 Identities=20% Similarity=0.134 Sum_probs=75.0
Q ss_pred cccccCCChHHHHHHHHHHHHHhCCCccccccccceE--EEEEEecCCCc--eecc-CCCCC-CCCCCCCCCCCCeEEec
Q 009198 420 AEEWISCSDSEIIDATMKELAKLFPDEISADQSKAKI--VKYHVVKTPRS--VYKT-IPNCE-PCRPLQRSPVEGFYLAG 493 (540)
Q Consensus 420 ~~~~~~~~~e~~~~~v~~~l~~~~p~~~~~~~~~~~~--~~~~~~~~p~~--~~~~-~~~~~-~~~~~~~~~~~~l~~aG 493 (540)
...|..++++++++.++++|.++|+... . + .... ....|...|++ .|.+ .|+.. ...+.+.+|.++|||||
T Consensus 48 A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~-~-~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAG 124 (181)
T 2e1m_C 48 AARWDSFDDAERYGYALENLQSVHGRRI-E-V-FYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAG 124 (181)
T ss_dssp HHHHTTSCTTTTHHHHHHHHHHHHCGGG-G-G-TEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECS
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCCCc-H-h-hccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEE
Confidence 3667788999999999999999996432 1 1 1123 55677777874 3443 34421 22344566789999999
Q ss_pred ccccCCCCCchHHHHHHHHHHHHHHHHHHhHHHhhc
Q 009198 494 DYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARG 529 (540)
Q Consensus 494 ~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~~~~~ 529 (540)
++++. +.++|+||++||++||++|++.++......
T Consensus 125 e~ts~-~~g~~eGAl~SG~raA~~i~~~l~~~~~~~ 159 (181)
T 2e1m_C 125 EHVSL-KHAWIEGAVETAVRAAIAVNEAPVGDTGVT 159 (181)
T ss_dssp GGGTT-STTSHHHHHHHHHHHHHHHHTCCC------
T ss_pred HHHcC-CccCHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 99996 889999999999999999999887655433
No 96
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.97 E-value=3.5e-09 Score=101.85 Aligned_cols=40 Identities=35% Similarity=0.443 Sum_probs=36.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCceEEEecCCCCCcc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGK 95 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~~~gG~ 95 (540)
.++||+|||||++|+++|+.|+++ |++|+|+|+...+||.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg 119 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG 119 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc
Confidence 468999999999999999999997 9999999999887763
No 97
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.97 E-value=8.5e-09 Score=107.80 Aligned_cols=59 Identities=15% Similarity=0.213 Sum_probs=51.6
Q ss_pred CccchhHHHHHHHHc-CcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+...|.+.+++. |++|+++ +|++|..++++.+++|++.+|+++.||.||.|+|.+.
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 357888999999998 9999999 9999987556777789999998899999999999875
No 98
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.96 E-value=9.5e-09 Score=103.65 Aligned_cols=58 Identities=21% Similarity=0.228 Sum_probs=50.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.++++|++|++++.|++|.. +++++.+|++.+|+++.||.||+|+|...
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 45677788888999999999999999987 56677789999999999999999999754
No 99
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.96 E-value=6.5e-09 Score=108.14 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=49.9
Q ss_pred CccchhHHHHHHHH-cCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+...|.+.+.+ .|++++.+ .|++|..++++.++.|++.+|+++.||.||.|+|.+.
T Consensus 174 r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 174 AAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 35678888899988 89999999 5999987556666678888877899999999999975
No 100
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.96 E-value=1.5e-09 Score=111.79 Aligned_cols=40 Identities=33% Similarity=0.404 Sum_probs=36.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
+..+||+|||||++|+++|..|++.|.+|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 4678999999999999999999999999999999987764
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.96 E-value=3.5e-09 Score=109.69 Aligned_cols=61 Identities=13% Similarity=-0.003 Sum_probs=49.4
Q ss_pred ccchhHHHHHHHH-cCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~l 344 (540)
..+...|.+.+++ .|++| +++.|++|.. +++++++|.+.+|+++.|+.||+|||.+.....
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTCEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccCce
Confidence 3566777888877 48999 5789999987 567788899999988999999999998754433
No 102
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.96 E-value=2.6e-09 Score=111.08 Aligned_cols=61 Identities=8% Similarity=0.024 Sum_probs=49.4
Q ss_pred ccchhHHHHHHHH-cCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~l 344 (540)
..+...|.+.+++ .|++| +++.|+.|.. +++++++|.+.+|.++.|+.||+|+|.+.....
T Consensus 124 ~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~ 185 (651)
T 3ces_A 124 VLYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKI 185 (651)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTCCEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCccCcc
Confidence 3566778888877 58999 6789999987 567788899999988999999999998764433
No 103
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.95 E-value=2.6e-09 Score=104.52 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=48.7
Q ss_pred CcceeeecCCCCccchhHHHHHHHHc-CcEEEeCcceeEEEEccCCcEEEEEEcC-----CcEEEcCEEEEccCHH
Q 009198 270 GSKMAFLDGNPPERLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVD 339 (540)
Q Consensus 270 g~~~~~~~gg~~~~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~~~~-----G~~i~a~~VI~A~~~~ 339 (540)
|..+.+......-.....+.+.+.+. |++|++++.|++|.. +++.+.+|++.+ ++++.+|.||+|+|..
T Consensus 196 g~~v~~v~~~~~~~~~~~~~~~l~~~~gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 196 GSKVFMLVRKDHLRASTIMQKRAEKNEKIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp SSEEEEECSSSSCCSCHHHHHHHHHCTTEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CCEEEEEEcCCccCCCHHHHHHHHhcCCeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 44444444331112256677778776 999999999999987 455566677765 4579999999999874
No 104
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.95 E-value=4.7e-09 Score=107.40 Aligned_cols=56 Identities=23% Similarity=0.207 Sum_probs=45.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEE--cCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLL--TNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~--~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+++.|++|+++++| +|.. +++++.+|.. .+| ++.||.||+|||.+.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 467888888887789999999999 9987 4667766665 344 688999999999865
No 105
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.95 E-value=2.1e-08 Score=104.19 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=48.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcE--EEEEEcCCc-EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTV--KNFLLTNGN-VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~--~~V~~~~G~-~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.+++.|++|+++++|++|...+++++ +.|++.+|+ ++.||.||+|+|...
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 45677888999999999999999999987445543 457888887 799999999998754
No 106
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.94 E-value=4.5e-09 Score=100.52 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~~~gG~~ 96 (540)
.++||+|||||++|+++|+.|++. |++|+|+|+.+.+||.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 457999999999999999999998 99999999999887643
No 107
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.93 E-value=6.2e-09 Score=95.93 Aligned_cols=56 Identities=13% Similarity=0.065 Sum_probs=45.6
Q ss_pred cchhHHHHHHHHc-CcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+...|.+.+++. |++++ +++|++|.. +++.+++|.+.+|+++.||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4556677777776 89998 679999987 45666678898997899999999999965
No 108
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.93 E-value=7.1e-09 Score=108.18 Aligned_cols=42 Identities=26% Similarity=0.478 Sum_probs=38.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
+.++||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 456899999999999999999999999999999999888754
No 109
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.91 E-value=1.2e-08 Score=108.42 Aligned_cols=59 Identities=15% Similarity=0.110 Sum_probs=47.2
Q ss_pred ccchhHHHHHHHHc-Cc-EEEeCcceeEEEEccC--CcEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSL-GG-EVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~-G~-~i~~~t~V~~I~~~~~--~~~~~V~~---~~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+. |+ +|++++.|++|..+++ +++++|.. .+|+ ++.|+.||+|||.+.
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 46777888888887 99 9999999999987433 28888764 4665 689999999998865
No 110
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.89 E-value=8.5e-09 Score=99.31 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+||+|||||++|++||++|++.|++|+|+|+...
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~ 40 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN 40 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 468999999999999999999999999999998643
No 111
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.89 E-value=1.8e-07 Score=99.72 Aligned_cols=62 Identities=26% Similarity=0.319 Sum_probs=46.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHH-----CCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLAD-----AGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGI 130 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~-----~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl 130 (540)
.++||+|||||++||++|..|++ .|.+|+|+|+++....... +. ...+...++++++|+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gr-------------a~---~l~~~tle~l~~lGl 70 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQ-------------AD---GLQCRTLESLKNLGL 70 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCS-------------CC---EECHHHHHHHHTTTC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCc-------------ee---EEChHHHHHHHHCCC
Confidence 36799999999999999999999 9999999999864321100 00 123456788888887
Q ss_pred Ccc
Q 009198 131 NDR 133 (540)
Q Consensus 131 ~~~ 133 (540)
...
T Consensus 71 ~~~ 73 (665)
T 1pn0_A 71 ADK 73 (665)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 112
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.89 E-value=8.4e-09 Score=103.60 Aligned_cols=58 Identities=17% Similarity=0.223 Sum_probs=50.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|++++.|++|.. +++++.+|++.+|+++.||.||+|+|...
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 45677888888999999999999999987 45677789999999999999999999754
No 113
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.89 E-value=1e-08 Score=103.22 Aligned_cols=37 Identities=43% Similarity=0.641 Sum_probs=34.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCc-eEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~-v~v~E~~~~~g 93 (540)
++||+|||||++||++|+.|++.|.+ |+|+|+.+.++
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 57999999999999999999999999 99999987654
No 114
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.89 E-value=6.1e-09 Score=108.29 Aligned_cols=41 Identities=37% Similarity=0.550 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW 48 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc
Confidence 46799999999999999999999999999999999888754
No 115
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.88 E-value=7.8e-09 Score=102.18 Aligned_cols=41 Identities=22% Similarity=0.283 Sum_probs=37.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQL 53 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcc
Confidence 46799999999999999999999999999999998877644
No 116
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.85 E-value=1.2e-08 Score=99.69 Aligned_cols=41 Identities=27% Similarity=0.407 Sum_probs=37.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 35799999999999999999999999999999998877643
No 117
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.85 E-value=9.6e-09 Score=108.71 Aligned_cols=59 Identities=12% Similarity=0.141 Sum_probs=47.7
Q ss_pred ccchhHHHHHHHHc--CcEEEeCcceeEEEEccC--CcEEEEEE---cCCc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSL--GGEVRLNSRVQKIELNDD--GTVKNFLL---TNGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~--G~~i~~~t~V~~I~~~~~--~~~~~V~~---~~G~--~i~a~~VI~A~~~~~ 340 (540)
..+...|.+.+.+. |++|+.++.|++|..+++ +++++|.. .+|+ .|.|+.||+|||...
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 56788889999887 999999999999988444 38888865 3553 589999999998754
No 118
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.84 E-value=8.8e-09 Score=100.44 Aligned_cols=40 Identities=30% Similarity=0.401 Sum_probs=37.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.+||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 4799999999999999999999999999999999888754
No 119
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.83 E-value=1.8e-08 Score=97.75 Aligned_cols=39 Identities=31% Similarity=0.462 Sum_probs=35.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.++||+|||||++|+++|+.|++.|++|+|+|++ .||..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~ 52 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL 52 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee
Confidence 3579999999999999999999999999999998 66644
No 120
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.83 E-value=2e-08 Score=97.04 Aligned_cols=42 Identities=38% Similarity=0.612 Sum_probs=37.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEE-EecCCCCCcceee
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARDVLGGKIAA 98 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v-~E~~~~~gG~~~~ 98 (540)
.++||+|||||++|+++|+.|++.|++|+| +|+ +.+||....
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 467999999999999999999999999999 999 667886543
No 121
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.82 E-value=8e-09 Score=105.71 Aligned_cols=60 Identities=13% Similarity=0.144 Sum_probs=48.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEE-EcCCcEEEcCEEEEccCHHHHhh
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFL-LTNGNVIDGDAYVFATPVDILKL 343 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~-~~~G~~i~a~~VI~A~~~~~~~~ 343 (540)
..+.+.+.+.+++.|++|+++++|++|+.++++. +.|+ +.+|+ +.+|.||+|+|......
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 4567788889999999999999999998744443 4688 88996 99999999999865333
No 122
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.81 E-value=1.6e-08 Score=103.17 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=49.0
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 345 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll 345 (540)
..+.+.+.+.+++.|++|+++++|++|+. +++.+ .|.+.+| ++.||.||+|+|......++
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g-~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQ-EISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSC-EEEESEEEECSCCBCCCSSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCC-EEEeCEEEECcCCCCChHHH
Confidence 45667788888899999999999999986 45555 6888777 89999999999986533333
No 123
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.81 E-value=3.4e-08 Score=102.74 Aligned_cols=56 Identities=13% Similarity=0.200 Sum_probs=46.0
Q ss_pred cchhHHHHHHHHc-CcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSL-GGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+...|.+.+++. |++|+ +..|+.|.. +++.+.+|.+.+|+++.|+.||+|+|.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 5666777777774 89985 569999987 56677789999998999999999999875
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.80 E-value=2e-08 Score=99.60 Aligned_cols=55 Identities=15% Similarity=-0.031 Sum_probs=42.6
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+...+.+.+.+.|++++++++|++|...+++ + .|.+.+| ++.+|+||+|+|.+.
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~-~-~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADDAY-Y-TIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS-E-EEEESSC-CEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe-E-EEEeCCC-EEEeCEEEECCCCCC
Confidence 34455666667789999999999999874333 3 4778777 699999999999875
No 125
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.80 E-value=3.3e-09 Score=106.77 Aligned_cols=57 Identities=16% Similarity=0.262 Sum_probs=47.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.++++|++|++++.|++|.. ++.+.+|++.+|+++.||.||+|+|...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 35667788888899999999999999985 3355578999999999999999999864
No 126
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.77 E-value=3.6e-08 Score=102.96 Aligned_cols=61 Identities=25% Similarity=0.247 Sum_probs=46.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 132 (540)
.++||+|||||++||++|+.|++.|.+|+|+|+.+..+..... . .......++++++|+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~-------------~---~l~~~~~~~l~~lGl~~ 85 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV-------------G---TIGPRSMELFRRWGVAK 85 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC-------------C---EECHHHHHHHHHTTCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce-------------e---eeCHHHHHHHHHcCChH
Confidence 4579999999999999999999999999999998765432211 0 11234567788888754
No 127
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.76 E-value=1.8e-08 Score=103.74 Aligned_cols=58 Identities=24% Similarity=0.311 Sum_probs=48.1
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.++++|++|+++++|++|+.++++. +.|++.+|+++.+|.||+|+|...
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 3567778888999999999999999998743333 468888998899999999998765
No 128
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.75 E-value=1.4e-08 Score=104.65 Aligned_cols=42 Identities=26% Similarity=0.412 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 458999999999999999999999999999999999998643
No 129
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.75 E-value=5.6e-08 Score=85.63 Aligned_cols=53 Identities=21% Similarity=0.194 Sum_probs=41.7
Q ss_pred chhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 284 LCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 284 l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+.+.+.+++.|++++++ +|++|+.++++ +.|++.+| ++.+|.||+|+|...
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGV--FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSS--EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCE--EEEEECCC-EEEECEEEECCCCCC
Confidence 3445666677789999999 99999874333 35888888 899999999999753
No 130
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.73 E-value=4.1e-08 Score=100.85 Aligned_cols=59 Identities=19% Similarity=0.202 Sum_probs=47.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCC-cEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG-NVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G-~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|+++++|++|+..+++.+..|++.+| +++.+|.||+|+|...
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 3566778888889999999999999998744443446888899 7899999999998754
No 131
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.72 E-value=7.9e-08 Score=97.85 Aligned_cols=57 Identities=19% Similarity=0.276 Sum_probs=47.1
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+.+.+.+.+++.|++|+++++|++|+.++++. ..|++.+|+++.+|.||+|+|...
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 466778888889999999999999998743343 358888998899999999998754
No 132
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.71 E-value=1.8e-07 Score=96.01 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=47.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|+++++|++|+. +++.+. |++.+|+++.||.||+|+|...
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCCCc
Confidence 45677788888999999999999999986 455554 7788898999999999998754
No 133
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=2.1e-07 Score=96.06 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=47.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcE-EEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNV-IDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~-i~a~~VI~A~~~~~ 340 (540)
..+...+.+.++++|++|++++.|++|+.++++. ..|++.+|++ +.+|.||+|+|...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCc
Confidence 3566778888999999999999999998743443 3578889987 99999999998755
No 134
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.69 E-value=5.2e-08 Score=94.44 Aligned_cols=57 Identities=12% Similarity=0.102 Sum_probs=44.7
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC----C--cEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----G--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~----G--~~i~a~~VI~A~~~~~ 340 (540)
.+.+.+.+.+++.|++|+++++|++|.. +++++.+|++.+ | +++.+|.||+|+|...
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTG-DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEE-CSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEc-CCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 3556677777888999999999999986 444666677654 4 4799999999998754
No 135
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.69 E-value=2.4e-08 Score=102.35 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=35.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC-----CceEEEecCCCCCc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAG-----HKPLLLEARDVLGG 94 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g-----~~v~v~E~~~~~gG 94 (540)
..+||+|||||++|+++|..|++.| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 4579999999999999999999999 99999999988773
No 136
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.69 E-value=2.7e-07 Score=97.32 Aligned_cols=54 Identities=24% Similarity=0.334 Sum_probs=44.9
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 339 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~ 339 (540)
..+.+.+.+.+++.|++|+++++|++|+.. ++ +|++.+|+++.+|.||+|+|..
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCC
Confidence 456777888889999999999999999752 23 3778889899999999999864
No 137
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.69 E-value=8.6e-08 Score=93.15 Aligned_cols=40 Identities=43% Similarity=0.622 Sum_probs=35.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
..+||+|||||++|+++|..|++.|++|+|+|++ .+||.+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI 46 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc
Confidence 4579999999999999999999999999999998 566644
No 138
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.68 E-value=7.8e-08 Score=97.91 Aligned_cols=42 Identities=38% Similarity=0.427 Sum_probs=38.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCCCCCccee
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARDVLGGKIA 97 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~~~gG~~~ 97 (540)
..+||+|||||++|+++|..|++.|. +|+|+|+++.+||...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 46799999999999999999999999 9999999988888654
No 139
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.67 E-value=8.4e-08 Score=98.76 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=42.1
Q ss_pred HHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 288 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 288 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+.++++|++|++++.|++|.. ++.+..|.+.+|+++.||.||+|+|...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 33777888999999999999985 3345567888888899999999999864
No 140
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.67 E-value=2.2e-08 Score=103.45 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=49.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~l 344 (540)
..+...+.+.+++.|++|+++++|++|+. +++.+ .|++.+|+++.+|.||+|+|......+
T Consensus 223 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~-~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 223 ADAALVLEESFAERGVRLFKNARAASVTR-TGAGV-LVTMTDGRTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEE-CSSSE-EEEETTSCEEEESEEEECCCEEECCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEE-eCCEE-EEEECCCcEEEcCEEEECCCCCcCCCc
Confidence 35677888889999999999999999987 34344 577888888999999999998764444
No 141
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.66 E-value=2.3e-07 Score=94.71 Aligned_cols=56 Identities=20% Similarity=0.297 Sum_probs=46.6
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc-EEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-VIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~-~i~a~~VI~A~~~~~ 340 (540)
.+.+.+.+.+++.|++|+++++|++|..++++ ..|++.+|+ ++.+|.||+|+|...
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 45677788888999999999999999864333 458888998 899999999998754
No 142
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.65 E-value=4e-08 Score=101.25 Aligned_cols=57 Identities=23% Similarity=0.323 Sum_probs=47.4
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+...+.+.++++|++|++++.|++|..++++. +.|++.+|+++.+|.||+|+|...
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCcc
Confidence 567778888999999999999999998743333 468888998899999999998754
No 143
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.63 E-value=7.8e-08 Score=98.21 Aligned_cols=41 Identities=22% Similarity=0.421 Sum_probs=37.7
Q ss_pred CeEEEECCChHHHHHHHHHHH---CCCc---eEEEecCCCCCcceee
Q 009198 58 LKVVIAGAGLAGLSTAKYLAD---AGHK---PLLLEARDVLGGKIAA 98 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~---~g~~---v~v~E~~~~~gG~~~~ 98 (540)
+||+|||||++|+++|..|++ .|++ |+|+|+++.+||....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999886543
No 144
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.62 E-value=1.6e-07 Score=89.77 Aligned_cols=41 Identities=20% Similarity=0.371 Sum_probs=35.1
Q ss_pred CCCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhH
Q 009198 482 QRSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVL 524 (540)
Q Consensus 482 ~~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~ 524 (540)
.++..+|||.+||.+.. +..+..|+..|..||..|...+..
T Consensus 253 ~~t~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~ 293 (297)
T 3fbs_A 253 KQTTARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILF 293 (297)
T ss_dssp CBCSSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhh
Confidence 45678999999998763 368999999999999999988864
No 145
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.62 E-value=2.1e-07 Score=89.80 Aligned_cols=38 Identities=37% Similarity=0.643 Sum_probs=33.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCCCCcce
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~~gG~~ 96 (540)
+||+|||||++|+++|..|++.|+ +|+|+|++ .+||..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~ 40 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQI 40 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccc
Confidence 699999999999999999999999 99999995 455543
No 146
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.62 E-value=1.5e-07 Score=96.70 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=45.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC-------CcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-------GNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~-------G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|++++.|++|+..+++..+.|.+.+ |+++.+|.||+|+|...
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 456677888889999999999999999875455233566664 25799999999998754
No 147
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.62 E-value=4.6e-08 Score=100.51 Aligned_cols=41 Identities=32% Similarity=0.399 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.++||+|||||++|+++|+.|++.|++|+|+|+++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 57899999999999999999999999999999998777654
No 148
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.61 E-value=1.2e-07 Score=91.38 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=39.6
Q ss_pred HHHHHHHcCcEEEeCcceeEEEEccC-CcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 288 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 288 l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+.+.+.|++++++++|++|..+.+ +....|.+.+|+++.+|+||+|+|...
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 34444556889999999999975322 223458888888899999999999853
No 149
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.57 E-value=2.1e-07 Score=94.07 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=48.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEc-cCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN-DDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~-~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|+++++|++|... +++++..|++.+|+++.+|.||+|+|...
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 345667788888999999999999999852 34566678899998899999999998754
No 150
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.56 E-value=3.1e-07 Score=89.52 Aligned_cols=33 Identities=39% Similarity=0.563 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEec
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~ 88 (540)
..+||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 357999999999999999999999999999998
No 151
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.56 E-value=2.7e-07 Score=95.60 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=40.2
Q ss_pred HHHHHHHcCcEEEeCcceeEEEEccC-CcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 288 IVEHIQSLGGEVRLNSRVQKIELNDD-GTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 288 l~~~l~~~G~~i~~~t~V~~I~~~~~-~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+.+.+.|++++.+++|++|....+ +....|++.+|+++.+|+||+|+|...
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 44455667899999999999975221 223458888898899999999999853
No 152
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.56 E-value=5.9e-07 Score=91.48 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=48.3
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcC
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 345 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll 345 (540)
..+.+.+.+.+++.|++|+++++|++|.. +++++..|.+ +|+++.+|.||+|+|......++
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEEECCGGG
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCCCCHHHH
Confidence 35667788888999999999999999985 4555555655 77789999999999886533333
No 153
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.55 E-value=8.1e-07 Score=93.31 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=45.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEc------------------cCCcEEEEEEcCCcEEEcCEEEEccCHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELN------------------DDGTVKNFLLTNGNVIDGDAYVFATPVD 339 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~------------------~~~~~~~V~~~~G~~i~a~~VI~A~~~~ 339 (540)
..+...+.+.+++.|++|++++.|++|... +++.+ .+++.+|+++.||.||+|+|..
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHL-SLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEE-EEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcE-EEEEcCCCEEEcCEEEECcCCc
Confidence 356677788888999999999999999862 23443 4777888899999999999764
No 154
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.55 E-value=2.3e-07 Score=92.41 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=47.3
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|+++++|++|+.+ ++. ..|++.+|+++.||.||+|+|...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEG-LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCE-EEEEECCCCEEECCEEEECcCCCc
Confidence 356778888888999999999999999863 333 468888998899999999998764
No 155
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=1.5e-07 Score=96.47 Aligned_cols=42 Identities=38% Similarity=0.485 Sum_probs=38.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccc
Confidence 457899999999999999999999999999999998888754
No 156
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.54 E-value=3.6e-07 Score=90.76 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=35.9
Q ss_pred HHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHH
Q 009198 293 QSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 339 (540)
Q Consensus 293 ~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~ 339 (540)
.+.|++++++++|++|.. ++ + .|++.+|+++.+|+||+|||..
T Consensus 73 ~~~~i~~~~~~~V~~id~-~~-~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 73 EKNNIKVITSEFATSIDP-NN-K--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp HHTTCEEECSCCEEEEET-TT-T--EEEETTSCEEECSEEEECCCEE
T ss_pred HHCCCEEEeCCEEEEEEC-CC-C--EEEECCCCEEECCEEEEecCCC
Confidence 456899999999999985 33 3 3778899899999999999974
No 157
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.53 E-value=4.3e-07 Score=88.58 Aligned_cols=46 Identities=24% Similarity=0.213 Sum_probs=37.3
Q ss_pred CCCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhHHHhhc
Q 009198 483 RSPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLAARG 529 (540)
Q Consensus 483 ~~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~~~~~ 529 (540)
.+..+|||.+||.+... +.....|+.+|..||..|...+.......
T Consensus 277 ~t~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l~~~~~~~ 322 (335)
T 2a87_A 277 STSLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWLAEHAATG 322 (335)
T ss_dssp BCSSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHhhcCcCcc
Confidence 46789999999988653 24788899999999999999998766543
No 158
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.52 E-value=2.6e-07 Score=92.94 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=44.1
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.+++.|+++++++.|++|+. + +|++.+|+++.+|.||+|+|...
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCCCc
Confidence 35677788888899999999999999963 2 26788998999999999998643
No 159
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.51 E-value=5e-07 Score=94.06 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHC-CCceEEEecCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~ 90 (540)
...+|+||||||.+|+.+|.+|++. +.+|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4679999999999999999999986 78999999987
No 160
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.49 E-value=1.3e-07 Score=97.16 Aligned_cols=42 Identities=38% Similarity=0.470 Sum_probs=37.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 357999999999999999999999999999999888887553
No 161
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.47 E-value=3.6e-07 Score=93.93 Aligned_cols=41 Identities=37% Similarity=0.472 Sum_probs=37.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVC 45 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCce
Confidence 35899999999999999999999999999999988888754
No 162
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.45 E-value=3.7e-07 Score=93.94 Aligned_cols=57 Identities=25% Similarity=0.294 Sum_probs=47.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.++++|++|++++.|++|.. +++.+ .|++.+|+++.||.||+|+|...
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~-~~~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGV-SSGKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEE-ETTEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-cCCeE-EEEECCCCEEECCEEEECCCCCc
Confidence 45667788888899999999999999986 34443 68889998999999999998764
No 163
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.45 E-value=1.3e-06 Score=90.91 Aligned_cols=37 Identities=32% Similarity=0.352 Sum_probs=33.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCC-CceEEEecCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARDV 91 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~~~ 91 (540)
..++|+||||||.+|+.+|.+|++.| .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 45699999999999999999999997 69999999765
No 164
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.44 E-value=7.9e-06 Score=84.19 Aligned_cols=63 Identities=13% Similarity=0.045 Sum_probs=47.5
Q ss_pred ccchhHHHHHHHHcC-cEEEeCcceeEEEEccCC-cEEEEEEc--CC-----cEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~-~~~~V~~~--~G-----~~i~a~~VI~A~~~~~~~~l 344 (540)
......+++.+.++| ++|++++.|++|..++++ ++++|.+. +| .++.|+.||+|+|.....+|
T Consensus 221 ~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~l 292 (504)
T 1n4w_A 221 QSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTEL 292 (504)
T ss_dssp CCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred cCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHH
Confidence 344556667777775 999999999999985434 78888874 56 36899999999998754444
No 165
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.43 E-value=9.6e-07 Score=89.32 Aligned_cols=39 Identities=31% Similarity=0.448 Sum_probs=35.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH--CCCceEEEecCCCCCcc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGK 95 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~--~g~~v~v~E~~~~~gG~ 95 (540)
.+||+|||||++|+++|+.|++ .|++|+|+|+++..++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 3699999999999999999999 78999999999876653
No 166
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.43 E-value=1.1e-06 Score=90.70 Aligned_cols=61 Identities=8% Similarity=-0.049 Sum_probs=49.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~l 344 (540)
..+...+.+.++++|+++++++.|++++. .++.+ .|.+.+++++.+|.|++|+|-......
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~-~~~~~-~v~~~~~~~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTK-MDDKI-LVEFSDKTSELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE-ETTEE-EEEETTSCEEEESEEEECSCEEESCGG
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEe-cCCeE-EEEEcCCCeEEEEEEEEcccccCCccc
Confidence 45778889999999999999999999997 34443 578888888999999999987553433
No 167
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.43 E-value=9.7e-08 Score=92.82 Aligned_cols=43 Identities=33% Similarity=0.366 Sum_probs=38.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHH--CCCceEEEecCCCCCccee
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLAD--AGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~--~g~~v~v~E~~~~~gG~~~ 97 (540)
..++||+|||||++||+||++|++ .|++|+|+|+++.+||.+.
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 356899999999999999999985 4999999999999999764
No 168
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.43 E-value=3.3e-07 Score=92.00 Aligned_cols=53 Identities=25% Similarity=0.257 Sum_probs=44.6
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.+++.|++|+++++|++|+ + + .|++.+|+++.+|.||+|+|...
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV--D-G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE--T-T---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECCCCEEEcCEEEECcCCCc
Confidence 3466778888899999999999999997 2 3 47788998899999999998754
No 169
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.42 E-value=3.6e-07 Score=95.07 Aligned_cols=37 Identities=32% Similarity=0.451 Sum_probs=32.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHH-CCCceEEEecCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDV 91 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~-~g~~v~v~E~~~~ 91 (540)
..++|+||||||.+|+..|.+|++ .|++|+|||+.+.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 358999999999999999999998 5789999999754
No 170
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.38 E-value=2.3e-06 Score=88.31 Aligned_cols=63 Identities=16% Similarity=0.105 Sum_probs=47.2
Q ss_pred ccchhHHHHHHHHcC-cEEEeCcceeEEEEccCC-cEEEEEEc--CC-----cEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQSLG-GEVRLNSRVQKIELNDDG-TVKNFLLT--NG-----NVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~-~~~~V~~~--~G-----~~i~a~~VI~A~~~~~~~~l 344 (540)
......++..+.++| ++|++++.|++|..++++ ++++|.+. +| .++.|+.||+|+|.....+|
T Consensus 226 ~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~l 297 (507)
T 1coy_A 226 KSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKL 297 (507)
T ss_dssp CCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHH
T ss_pred cChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHH
Confidence 344566666666675 999999999999985445 68888874 45 36889999999998744444
No 171
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.36 E-value=6.3e-07 Score=93.10 Aligned_cols=36 Identities=33% Similarity=0.335 Sum_probs=33.2
Q ss_pred CCeEEEECCChHHHHHHHHHHH-CCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~-~g~~v~v~E~~~~~ 92 (540)
.+|+||||||.+|+.+|.+|++ .|.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999 58999999998765
No 172
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.36 E-value=2.6e-06 Score=88.66 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=34.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCceEEEecCCCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~~~g 93 (540)
..+|++|||||.+|+.+|++|++. |.+|+|||+.....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCC
Confidence 568999999999999999999998 89999999987654
No 173
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.35 E-value=3.2e-06 Score=85.53 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=45.9
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+.+.+.+.++++|+++++++.|++++. + .|++.+|+++.+|.||+|+|...
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~--~----~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING--N----EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET--T----EEEETTSCEEECSEEEECCCEEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC--C----eeeecCCeEEeeeeEEEEeceec
Confidence 356788899999999999999999999852 2 37789999999999999998754
No 174
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.31 E-value=4.5e-07 Score=87.47 Aligned_cols=40 Identities=33% Similarity=0.609 Sum_probs=35.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
.+|||+|||||++|++||.+|++.|++|+|+|+. .+||.+
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~ 44 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQM 44 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCee
Confidence 4799999999999999999999999999999985 456644
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.29 E-value=3.7e-07 Score=91.54 Aligned_cols=46 Identities=7% Similarity=0.047 Sum_probs=37.6
Q ss_pred HHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHH
Q 009198 292 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVD 339 (540)
Q Consensus 292 l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~ 339 (540)
+++.|+++++++.|+.++.+.++. .|.+.+|+++.+|.||+++|..
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~~--~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEAM--TVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHhcCcEEEeCceEEEEEecccce--EEEcCCCcEEEeeEEEEecCcC
Confidence 346789999999999998744443 4889999999999999998753
No 176
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.29 E-value=2.9e-06 Score=87.34 Aligned_cols=41 Identities=24% Similarity=0.192 Sum_probs=31.4
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
.+..+||||||+|++||++|..|.+.|...+++|+....|+
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 35668999999999999999999998877777777666554
No 177
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.29 E-value=6.8e-07 Score=91.92 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=44.2
Q ss_pred CccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc----EEEcCEEEEccCHH
Q 009198 281 PERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN----VIDGDAYVFATPVD 339 (540)
Q Consensus 281 ~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~----~i~a~~VI~A~~~~ 339 (540)
+..+.+.+.+.++++|++|++++.|++|+ +++....+...+|+ +|.||.||.|+|..
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 35677778888999999999999999996 34444445556663 69999999999853
No 178
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.25 E-value=3.5e-06 Score=83.07 Aligned_cols=34 Identities=32% Similarity=0.429 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..|++|||||++|++||..|++.| +|+|+|+++.
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 459999999999999999999999 9999999754
No 179
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.25 E-value=5.9e-06 Score=84.70 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=32.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~~~g 93 (540)
.+||+|||||++|+++|..|++. |.+|+|+|+++..+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 57999999999999999999996 89999999987653
No 180
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.24 E-value=2.2e-06 Score=86.76 Aligned_cols=34 Identities=38% Similarity=0.623 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHH---CCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLAD---AGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~---~g~~v~v~E~~~ 90 (540)
.+||||||||++|+++|..|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4699999999999999999999 799999999975
No 181
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.24 E-value=6.3e-07 Score=86.48 Aligned_cols=36 Identities=33% Similarity=0.438 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+||+|||||++|++||..|++.|++|+|+|+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 458999999999999999999999999999999754
No 182
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.24 E-value=3.6e-06 Score=86.53 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=33.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC---CceEEEecCCCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAG---HKPLLLEARDVLG 93 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g---~~v~v~E~~~~~g 93 (540)
.++||+|||||++|+++|..|++.| .+|+|+|+++.++
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 3589999999999999999999988 9999999986543
No 183
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.24 E-value=5.4e-06 Score=84.21 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=32.8
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCceEEEecCCCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVLG 93 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~~~g 93 (540)
+||+|||||++|+++|..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 5899999999999999999998 89999999987644
No 184
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.20 E-value=1.6e-05 Score=82.46 Aligned_cols=38 Identities=29% Similarity=0.359 Sum_probs=34.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..++|+||||||.+|+.+|.+|++ |.+|+|||+....+
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 356899999999999999999999 99999999986543
No 185
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.15 E-value=8.3e-06 Score=82.31 Aligned_cols=53 Identities=17% Similarity=0.102 Sum_probs=39.0
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCC--cEEEcCEEEEccCHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVD 339 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G--~~i~a~~VI~A~~~~ 339 (540)
...+.+.+.++++|+++++++.|++|+. + .+ .+...+| +++.+|.||+|+|..
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~--~-~~-~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP--D-KV-IYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS--S-EE-EEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC--C-ce-EEEeeCCCceEeecceEEEeccCC
Confidence 3445577778889999999999999952 3 33 2444444 479999999998754
No 186
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.15 E-value=1.6e-06 Score=93.52 Aligned_cols=44 Identities=27% Similarity=0.475 Sum_probs=40.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceee
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAA 98 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~ 98 (540)
...+||+|||||++|++||+.|+++|++|+|+|+++.+||....
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 45789999999999999999999999999999999999997654
No 187
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.11 E-value=2.6e-06 Score=86.37 Aligned_cols=43 Identities=33% Similarity=0.451 Sum_probs=39.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
...+||+|||||++|+++|+.|++.|++|+|+|+.+.+||...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 4568999999999999999999999999999999999998754
No 188
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.10 E-value=2.2e-06 Score=82.83 Aligned_cols=41 Identities=41% Similarity=0.643 Sum_probs=36.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
..++||+|||||++|+++|+.|++.|++|+|+|+. .+||.+
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 54 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLT 54 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGG
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccc
Confidence 34679999999999999999999999999999994 566654
No 189
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.02 E-value=3.3e-05 Score=78.54 Aligned_cols=50 Identities=18% Similarity=0.213 Sum_probs=39.2
Q ss_pred HHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHH
Q 009198 290 EHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 290 ~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~ 341 (540)
+.+++.|++|+++++|++|+.+ ++. +.|++.+|+++.+|.||+|+|....
T Consensus 216 ~~l~~~Gv~i~~~~~V~~i~~~-~~~-v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 216 RVFKKQGLTIRTGVRVTAVVPE-AKG-ARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp HHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCCeEEEcCEEEECcCCCcC
Confidence 3445668999999999999863 333 3577778888999999999998653
No 190
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.02 E-value=3.8e-06 Score=85.92 Aligned_cols=41 Identities=34% Similarity=0.520 Sum_probs=37.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 57999999999999999999999999999999988888643
No 191
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.02 E-value=4.4e-06 Score=89.37 Aligned_cols=43 Identities=33% Similarity=0.525 Sum_probs=39.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
...+||+|||||++|+++|..|++.|++|+|+|+++.+||...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 4578999999999999999999999999999999999988754
No 192
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.01 E-value=3.2e-06 Score=86.35 Aligned_cols=41 Identities=37% Similarity=0.451 Sum_probs=38.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 57999999999999999999999999999999999998754
No 193
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.99 E-value=3.8e-06 Score=86.05 Aligned_cols=42 Identities=29% Similarity=0.443 Sum_probs=38.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
+.++||+|||||++|+++|..|++.|++|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTC 45 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcc
Confidence 356899999999999999999999999999999998888864
No 194
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.96 E-value=3.3e-05 Score=78.37 Aligned_cols=36 Identities=31% Similarity=0.492 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 356999999999999999999999999999998653
No 195
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.95 E-value=5.8e-06 Score=84.19 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 37999999999999999999999999999999988888643
No 196
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.94 E-value=5e-06 Score=83.96 Aligned_cols=35 Identities=26% Similarity=0.358 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++||+|||||++|+++|+.|++.|++|+|+|++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999976
No 197
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.94 E-value=6.2e-06 Score=81.90 Aligned_cols=35 Identities=34% Similarity=0.393 Sum_probs=32.9
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCceEEEecCCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDVL 92 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~~~ 92 (540)
+||+|||||++||++|+.|++. |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998765
No 198
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=6.3e-06 Score=84.71 Aligned_cols=58 Identities=14% Similarity=0.128 Sum_probs=43.9
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC---Cc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~---G~--~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|++++.|++|...+++.+ .|++.+ |+ ++.+|.||+|+|...
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 45677788888899999999999999987444443 355544 54 478999999998754
No 199
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.91 E-value=8.4e-06 Score=84.36 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=33.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++||+|||||++|+++|..|++.|++|+|+|+++
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 356899999999999999999999999999999964
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.91 E-value=6.5e-05 Score=76.90 Aligned_cols=35 Identities=26% Similarity=0.467 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998653
No 201
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.90 E-value=9e-06 Score=83.08 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=45.7
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~ 341 (540)
..+.+.+.+.++++|++|+++++|++|.. +++ ...|.+.+ +++.+|.||+|+|....
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~-~~~v~~~~-~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAH-MDG-EFVLTTTH-GELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEE-ETT-EEEEEETT-EEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEE-eCC-EEEEEECC-cEEEcCEEEECCCCCcC
Confidence 45677888889999999999999999986 333 34577765 47999999999998653
No 202
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.89 E-value=8e-06 Score=86.14 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
..+||+|||||++|+++|+.|++.|++|+|+|+.+..||..
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999999888743
No 203
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.88 E-value=8.4e-05 Score=75.73 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 203 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPE 203 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCc
Confidence 35899999999999999999999999999998643
No 204
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.84 E-value=9.1e-06 Score=83.53 Aligned_cols=60 Identities=12% Similarity=-0.056 Sum_probs=44.4
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc--CC--cEEEcCEEEEccCHHHHhhc
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~--~G--~~i~a~~VI~A~~~~~~~~l 344 (540)
..+.+.+.+.+++. ++|++++.|++|+.+ ++.+ .|++. +| +++.+|.||+|+|......+
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~~~v-~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEK-EDAV-EVIYFDKSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEEC-SSSE-EEEEECTTCCEEEEEESEEEECSCCEESCSS
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEc-CCEE-EEEEEeCCCceEEEECCEEEEeeCCccCCCC
Confidence 35566677777777 999999999999873 4444 35554 67 57999999999988653333
No 205
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.83 E-value=0.0001 Score=75.65 Aligned_cols=49 Identities=16% Similarity=0.299 Sum_probs=37.8
Q ss_pred HHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 289 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 289 ~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
.+.+++.|++|++++.|++|.. ++++..|.+ +|+++.+|.||+|+|...
T Consensus 243 ~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 243 AKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 3445667899999999999985 444444666 677899999999998754
No 206
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.83 E-value=1.2e-05 Score=82.39 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=45.7
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCc-----EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGN-----VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~-----~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|++++.|++|+..+++.+ .|++.+|+ ++.+|.||+|+|...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 45667788888999999999999999987445544 46666553 799999999998754
No 207
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=9.6e-06 Score=82.58 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=35.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcce
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKI 96 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~ 96 (540)
++||+|||||++|+++|..|++.|++|+|+|++ ..||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 579999999999999999999999999999998 677754
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.82 E-value=8.7e-06 Score=82.92 Aligned_cols=55 Identities=22% Similarity=0.230 Sum_probs=42.9
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCC--cEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNG--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G--~~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|+++++|++|.. +. +.+++.+| +++.+|.||+|+|...
T Consensus 212 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~-v~v~~~~G~~~~i~~D~vv~a~G~~p 268 (458)
T 1lvl_A 212 SELTAPVAESLKKLGIALHLGHSVEGYEN---GC-LLANDGKGGQLRLEADRVLVAVGRRP 268 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEETTCEEEEEET---TE-EEEECSSSCCCEECCSCEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEe---CC-EEEEECCCceEEEECCEEEECcCCCc
Confidence 34567778888889999999999999974 23 34554456 5899999999999865
No 209
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.80 E-value=1.9e-05 Score=76.32 Aligned_cols=38 Identities=34% Similarity=0.297 Sum_probs=34.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcc
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGK 95 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~ 95 (540)
+||+|||||.+|+.+|+.|++.|++|+|+|+++..+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp 39 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTP 39 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCc
Confidence 69999999999999999999999999999998765543
No 210
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.80 E-value=8.2e-05 Score=76.14 Aligned_cols=55 Identities=16% Similarity=0.096 Sum_probs=40.2
Q ss_pred HHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHHhhcC
Q 009198 288 IVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQL 345 (540)
Q Consensus 288 l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~~~ll 345 (540)
+.+.+++.|++|+++++|++|.. + +.+..|.+.++ ++.+|.||+|+|......++
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~-~-~~v~~v~~~~~-~i~~D~vi~a~G~~p~~~~l 287 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKG-N-ERVEAVETDKG-TYKADLVLVSVGVKPNTDFL 287 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEE-S-SBEEEEEETTE-EEECSEEEECSCEEESCGGG
T ss_pred HHHHHHHcCcEEEcCCEEEEEEc-C-CcEEEEEECCC-EEEcCEEEECcCCCcChHHH
Confidence 33445667899999999999986 3 45555767554 79999999999886533333
No 211
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.78 E-value=0.00012 Score=74.28 Aligned_cols=35 Identities=29% Similarity=0.476 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999998643
No 212
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.77 E-value=2.4e-05 Score=63.43 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=56.8
Q ss_pred cEEEcCEEEEccCHHHHhhcCCCCchhhHHHHHHhccCCcCeEEEEEEeccccccccCcceeecCCceeEEeccCccccc
Q 009198 325 NVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSSLLSVYADMSLTCKE 404 (540)
Q Consensus 325 ~~i~a~~VI~A~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 404 (540)
++++||+||+|+|..++..+...+.+|....++++++++....|+++.|+++||+..+. .+ +.+. .
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~-~g----------d~s~---~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEA-DW----------KREL---D 69 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHH-HH----------HHHH---H
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCc-cc----------cccC---C
Confidence 37999999999999999887555567888899999999999999999999999976321 11 1000 0
Q ss_pred ccCCCccEEEEE--eeccccccCCChHHHHHHHHHHHHHhCCC
Q 009198 405 YYNPNQSMLELV--FAPAEEWISCSDSEIIDATMKELAKLFPD 445 (540)
Q Consensus 405 ~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~~v~~~l~~~~p~ 445 (540)
-..++ .++.++ ..+...|..+++ +-.+.++..|.+++|+
T Consensus 70 ~~~pg-~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 70 AIAPG-LYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp HHSTT-HHHHHHHHCCCSCCCC---------------------
T ss_pred CCCCe-EEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 00111 122222 122356766654 6778888999999996
No 213
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.77 E-value=1.4e-05 Score=81.55 Aligned_cols=56 Identities=16% Similarity=0.235 Sum_probs=42.6
Q ss_pred cchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc-CC--cEEEcCEEEEccCHHH
Q 009198 283 RLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-NG--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 283 ~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~-~G--~~i~a~~VI~A~~~~~ 340 (540)
.+.+.+.+.++++|++|++++.|++|+.+ ++.+ .|++. +| +++.+|.||+|+|...
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 213 DVSKEIEKQFKKLGVTILTATKVESIADG-GSQV-TVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHHHHHHTCEEECSCEEEEEEEC-SSCE-EEEEESSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEc-CCeE-EEEEEcCCceEEEEcCEEEECCCCCc
Confidence 45666778888889999999999999863 3333 35554 56 5789999999998764
No 214
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.74 E-value=0.00018 Score=73.52 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 212 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGH 212 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCc
Confidence 36899999999999999999999999999998643
No 215
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.70 E-value=2.3e-05 Score=79.85 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=44.8
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc-C--Cc--EEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-N--GN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~-~--G~--~i~a~~VI~A~~~~~ 340 (540)
..+.+.+.+.+++.|++|++++.|++|..+ ++.+ .|++. + |+ ++.+|.||+|+|...
T Consensus 210 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 210 PETAALLRRALEKEGIRVRTKTKAVGYEKK-KDGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTEE-EEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCEE-EEEEeecCCCceeEEEcCEEEECCCccc
Confidence 345667788888999999999999999863 3333 46665 6 76 799999999998754
No 216
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.70 E-value=0.00014 Score=73.93 Aligned_cols=36 Identities=28% Similarity=0.496 Sum_probs=32.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 458999999999999999999999999999997654
No 217
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.68 E-value=0.00012 Score=75.00 Aligned_cols=54 Identities=9% Similarity=-0.034 Sum_probs=39.8
Q ss_pred HHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC----CcEEEcCEEEEccCHHHHhhc
Q 009198 289 VEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN----GNVIDGDAYVFATPVDILKLQ 344 (540)
Q Consensus 289 ~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~----G~~i~a~~VI~A~~~~~~~~l 344 (540)
.+.+++.|++|++++.|++|+.+ ++. ..|++.+ |+++.+|.||+|+|......+
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~-~~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~ 290 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPK-EDG-VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKL 290 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEE-TTE-EEEEEESSSCCSSCEEESCEEECCCEEECGGG
T ss_pred HHHHHhcCCEEEECCEEEEEEEc-CCe-EEEEEeccCCCceEEEcCEEEECcCCCcCCCC
Confidence 34456678999999999999863 332 3567766 767999999999987653433
No 218
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.68 E-value=0.0003 Score=71.68 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
..+++|||||.+|+-+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999987643
No 219
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.66 E-value=3.1e-05 Score=85.96 Aligned_cols=41 Identities=34% Similarity=0.602 Sum_probs=38.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCccee
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~ 97 (540)
.+||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 57999999999999999999999999999999999998776
No 220
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.64 E-value=3.6e-05 Score=86.06 Aligned_cols=41 Identities=32% Similarity=0.500 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~~gG~~ 96 (540)
..+||+|||||++|++||+.|++.|+ +|+|+|+.+.+||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46799999999999999999999999 799999999999875
No 221
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.64 E-value=3.2e-05 Score=78.50 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=37.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC--CceEEEecCCCCCccee
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARDVLGGKIA 97 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g--~~v~v~E~~~~~gG~~~ 97 (540)
..+||+|||||++|+.+|..|++.| ++|+|+|+.+.+||...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4579999999999999999999998 89999999998888653
No 222
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.64 E-value=0.00035 Score=71.23 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 4689999999999999999999999999999864
No 223
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.63 E-value=3.7e-05 Score=78.02 Aligned_cols=55 Identities=18% Similarity=0.257 Sum_probs=41.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
..+...+.+.+++. +++++++.|++|.. ++ .+..+. .+|+++.+|.||+|+|...
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~-~~-~v~~v~-~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEG-EE-RVEKVV-TDAGEYKAELVILATGIKP 244 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEEC-SS-SCCEEE-ETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEec-cC-cEEEEE-eCCCEEECCEEEEeeCCcc
Confidence 34566677778888 99999999999985 23 343344 4666899999999998753
No 224
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.62 E-value=2.8e-05 Score=78.90 Aligned_cols=41 Identities=24% Similarity=0.263 Sum_probs=37.5
Q ss_pred CCeEEEECCChHHHHHHHHHHH-C------CCceEEEecCCCCCccee
Q 009198 57 PLKVVIAGAGLAGLSTAKYLAD-A------GHKPLLLEARDVLGGKIA 97 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~-~------g~~v~v~E~~~~~gG~~~ 97 (540)
.+||+|||||++|+++|..|++ . |++|+|+|+.+.+||...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 4699999999999999999999 7 999999999988888763
No 225
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.60 E-value=0.00032 Score=71.45 Aligned_cols=35 Identities=23% Similarity=0.415 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 210 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTL 210 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCc
Confidence 45899999999999999999999999999998754
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.57 E-value=0.00018 Score=70.78 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+++|||||.+|+.+|..|++.|.+|+|+|+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 176 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 176 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 589999999999999999999999999999864
No 227
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.57 E-value=4.8e-05 Score=79.25 Aligned_cols=58 Identities=7% Similarity=0.004 Sum_probs=44.5
Q ss_pred hHHHHHHHH-cCcEEEeCcceeEEEEccCCcEEEEEEcC---Cc--EE---EcCEEEEccCHHHHhhc
Q 009198 286 LPIVEHIQS-LGGEVRLNSRVQKIELNDDGTVKNFLLTN---GN--VI---DGDAYVFATPVDILKLQ 344 (540)
Q Consensus 286 ~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~~~~~V~~~~---G~--~i---~a~~VI~A~~~~~~~~l 344 (540)
..+++.+.+ .|++|++++.|++|.. +++++++|.+.+ |+ ++ .++.||+|+|.....+|
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~l 265 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRI 265 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHH
Confidence 346666665 4899999999999998 566888998865 63 34 78999999999654444
No 228
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.54 E-value=5.8e-05 Score=79.61 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=32.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999973
No 229
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.54 E-value=0.00058 Score=69.73 Aligned_cols=34 Identities=38% Similarity=0.508 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+++|||+|.+|+.+|..|++.|.+|+++|+.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 4589999999999999999999999999999853
No 230
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.52 E-value=0.00029 Score=71.92 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999998643
No 231
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.48 E-value=0.0007 Score=69.39 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 468999999999999999999999999999987654
No 232
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.37 E-value=0.002 Score=65.46 Aligned_cols=36 Identities=22% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--CCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~~ 91 (540)
...+|+|||||.+|+-+|..|++. |.+|+++++++.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 356899999999999999999998 889999998754
No 233
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.34 E-value=0.0013 Score=67.31 Aligned_cols=33 Identities=33% Similarity=0.598 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
..+++|||||.+|+-+|..|++.|.+|+++++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 358999999999999999999999999999874
No 234
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.33 E-value=0.0011 Score=64.19 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 4689999999999999999999999999998753
No 235
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.31 E-value=0.00091 Score=65.46 Aligned_cols=47 Identities=19% Similarity=0.266 Sum_probs=36.5
Q ss_pred HHcCcEEEeCcceeEEEEccCCcEEEEEEc--CC--cEEEcCEEEEccCHHH
Q 009198 293 QSLGGEVRLNSRVQKIELNDDGTVKNFLLT--NG--NVIDGDAYVFATPVDI 340 (540)
Q Consensus 293 ~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~--~G--~~i~a~~VI~A~~~~~ 340 (540)
++.|++|+++++|++|.. +++++.+|++. +| +++.+|.||+|+|...
T Consensus 213 ~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp HHTSEEEESSEEEEEEEE-ETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred hcCceEEEcCcCHHHhcc-CCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 456799999999999987 45555556664 77 5799999999998543
No 236
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.26 E-value=0.00099 Score=69.02 Aligned_cols=50 Identities=14% Similarity=0.141 Sum_probs=41.2
Q ss_pred hhHHHHHHHHcCcEEEe--CcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHH
Q 009198 285 CLPIVEHIQSLGGEVRL--NSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 285 ~~~l~~~l~~~G~~i~~--~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~ 341 (540)
...+.+.+.+.++++.. +++|++|. ++ +|.+.+| ++.+|.||+|||..+.
T Consensus 341 ~~~y~~al~~~nV~lv~~~~~~I~~it--~~----gv~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 341 ETNYYETYNRDNVHLVDIREAPIQEVT--PE----GIKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp ESSHHHHTTSTTEEEEETTTSCEEEEE--TT----EEEESSC-EEECSEEEECCCCBSS
T ss_pred CccHHHHhcCCCEEEEecCCCCceEEc--cC----eEEeCCC-eeecCEEEECCccccc
Confidence 45577888888899986 88999996 33 4788999 8999999999999863
No 237
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.18 E-value=0.0027 Score=64.92 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
.+++|||||.+|+..|..|++.|.+|+++++.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 47999999999999999999999999999875
No 238
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.13 E-value=0.0025 Score=64.47 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
..+++|||+|.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 458999999999999999999999999999987643
No 239
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.94 E-value=0.00053 Score=71.76 Aligned_cols=38 Identities=34% Similarity=0.448 Sum_probs=34.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHH-CCCceEEEecCCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLAD-AGHKPLLLEARDVL 92 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~-~g~~v~v~E~~~~~ 92 (540)
...+|++|||||.+|+.+|.+|++ .|.+|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 356899999999999999999999 79999999997653
No 240
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.86 E-value=0.0083 Score=63.06 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
.+++|||||.+|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999864
No 241
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=96.81 E-value=0.0088 Score=61.60 Aligned_cols=32 Identities=25% Similarity=0.351 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
.+++|||||.+|+..|..|++.|.+|+|+++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999863
No 242
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.43 E-value=0.0037 Score=52.81 Aligned_cols=41 Identities=22% Similarity=0.377 Sum_probs=33.4
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 51 SPRPSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 51 ~~~~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
++.......|+|||+|..|...|..|.+.|++|+++|+++.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 33344567899999999999999999999999999998753
No 243
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.40 E-value=0.0046 Score=51.22 Aligned_cols=37 Identities=14% Similarity=0.146 Sum_probs=33.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
+.+.+|+|||+|..|...|..|.+.|++|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3455899999999999999999999999999998753
No 244
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.18 E-value=0.0048 Score=50.87 Aligned_cols=34 Identities=32% Similarity=0.600 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 245
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.02 E-value=0.0051 Score=58.66 Aligned_cols=35 Identities=17% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 35899999999999999999999999999998654
No 246
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.91 E-value=0.0064 Score=59.96 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=34.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 35899999999999999999999999999999876544
No 247
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.84 E-value=0.0087 Score=49.49 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 248
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.66 E-value=0.0096 Score=47.28 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~~ 90 (540)
.+.|+|+|+|..|...+..|.+.| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 458999999999999999999999 8999999864
No 249
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.46 E-value=0.017 Score=56.88 Aligned_cols=38 Identities=24% Similarity=0.302 Sum_probs=34.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
..+++|||+|.+|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~ 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh
Confidence 46899999999999999999999999999999876543
No 250
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.44 E-value=0.015 Score=57.87 Aligned_cols=39 Identities=31% Similarity=0.364 Sum_probs=34.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
...+++|||+|.+|+.+|..|++.|.+|+++|+.+.+..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 356899999999999999999999999999999876543
No 251
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.38 E-value=0.013 Score=55.89 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+++|||||.+|+-+|..|++.|.+|+|+|+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~ 184 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRR 184 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccc
Confidence 3468999999999999999999999999999975
No 252
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.29 E-value=0.022 Score=47.85 Aligned_cols=33 Identities=12% Similarity=0.249 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
..+++|+|+|..|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 357999999999999999999999999999986
No 253
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.29 E-value=0.025 Score=56.77 Aligned_cols=59 Identities=24% Similarity=0.304 Sum_probs=44.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHHHHHhcCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQNLFGELGIND 132 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 132 (540)
..+++|||||.+|+..|..|++.|.+|+|+|+.+.+...... .....+.+.+++.|++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~d~-----------------~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDA-----------------DMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTSCG-----------------GGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccccc-----------------hhHHHHHHHhhccceEE
Confidence 458999999999999999999999999999998765432211 11234666777777663
No 254
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.26 E-value=0.022 Score=56.66 Aligned_cols=38 Identities=29% Similarity=0.387 Sum_probs=34.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc
Confidence 56899999999999999999999999999999876543
No 255
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.14 E-value=0.018 Score=54.56 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|.|||||..|...|..++..|++|+|+|.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 44589999999999999999999999999999764
No 256
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.13 E-value=0.022 Score=57.49 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 203 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL 203 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh
Confidence 4589999999999999999999999999999987644
No 257
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.08 E-value=0.021 Score=54.11 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999863
No 258
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.03 E-value=0.022 Score=49.42 Aligned_cols=35 Identities=29% Similarity=0.364 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~ 90 (540)
...+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 355899999999999999999999 99999999865
No 259
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.97 E-value=0.026 Score=46.49 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+|+|+|+|..|...|..|.+.|++|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999864
No 260
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=94.84 E-value=0.029 Score=56.78 Aligned_cols=37 Identities=32% Similarity=0.456 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 3589999999999999999999999999999986644
No 261
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.78 E-value=0.032 Score=53.55 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=32.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
+..++|+|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 445799999999999999999999998 999999864
No 262
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.77 E-value=0.022 Score=51.11 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
++|+|||+|..|...|..|.+.|++|+++|+++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998653
No 263
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=94.62 E-value=0.039 Score=55.28 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+|+|||+|.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 185 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL 185 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc
Confidence 4689999999999999999999999999999987654
No 264
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.56 E-value=0.033 Score=53.29 Aligned_cols=33 Identities=27% Similarity=0.454 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 265
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.54 E-value=0.03 Score=55.51 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=34.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
..+++|||+|.+|+.+|..|.+.|.+|+++|+.+.+..
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~ 179 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA 179 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh
Confidence 45899999999999999999999999999999876543
No 266
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.53 E-value=0.029 Score=56.26 Aligned_cols=37 Identities=32% Similarity=0.518 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
.++|+|||.|.+|+++|..|+++|++|++.|.+...-
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 3579999999999999999999999999999876543
No 267
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.49 E-value=0.032 Score=56.15 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|+|||.|.+|+++|..|+++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4689999999999999999999999999999864
No 268
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.41 E-value=0.042 Score=55.86 Aligned_cols=37 Identities=30% Similarity=0.447 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 221 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL 221 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc
Confidence 4589999999999999999999999999999987644
No 269
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.41 E-value=0.035 Score=57.12 Aligned_cols=36 Identities=25% Similarity=0.339 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
+.+++|||||+.|+-.|..+++.|.+|||+++...+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L 258 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL 258 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc
Confidence 347999999999999999999999999999976543
No 270
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.38 E-value=0.036 Score=54.00 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~ 199 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT 199 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC
Confidence 4589999999999999999999999999999864
No 271
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.31 E-value=0.038 Score=56.56 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+-.|..|++.|.+|+|+|+.+.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 4589999999999999999999999999999987654
No 272
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.31 E-value=0.036 Score=56.07 Aligned_cols=35 Identities=34% Similarity=0.585 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 56799999999999999999999999999999864
No 273
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.30 E-value=0.035 Score=52.91 Aligned_cols=33 Identities=36% Similarity=0.551 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999864
No 274
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.22 E-value=0.041 Score=52.37 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|.|||+|..|.+.|..|++.|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999864
No 275
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.21 E-value=0.045 Score=51.89 Aligned_cols=35 Identities=31% Similarity=0.429 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|+|||+|.+|+.+|..|++.|.+|+++++++.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 46899999999999999999999999999998653
No 276
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=94.19 E-value=0.04 Score=51.66 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 277
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.15 E-value=0.051 Score=54.96 Aligned_cols=37 Identities=19% Similarity=0.176 Sum_probs=33.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
...+|+|||+|.+|+-+|..|++.|.+|+|+++++.+
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 3568999999999999999999999999999987654
No 278
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.12 E-value=0.054 Score=48.11 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..++|.|||+|..|.+.|..|++.|++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 456899999999999999999999999999998754
No 279
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.10 E-value=0.057 Score=53.89 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|.|||+|..|...|..|++.|++|+++|.++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 345899999999999999999999999999998764
No 280
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.07 E-value=0.048 Score=54.08 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=33.3
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.....+|.|||.|+.||..|..|++.|++|+.+|-++
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3466799999999999999999999999999999764
No 281
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.06 E-value=0.05 Score=51.07 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 379999999999999999999999999999865
No 282
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.04 E-value=0.039 Score=56.91 Aligned_cols=36 Identities=17% Similarity=0.136 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456999999999999999999999999999999865
No 283
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.01 E-value=0.049 Score=48.65 Aligned_cols=34 Identities=18% Similarity=0.233 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
....|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4668999999999999999999999999999865
No 284
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.00 E-value=0.048 Score=51.67 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998654
No 285
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.93 E-value=0.034 Score=51.38 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999999754
No 286
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=93.93 E-value=0.052 Score=54.71 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+..|..|++.|.+|+|+|+.+.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 185 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL 185 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh
Confidence 4589999999999999999999999999999987644
No 287
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.91 E-value=0.061 Score=48.68 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=31.3
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+.|+|.|| |..|...|..|+++|++|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4568999998 9999999999999999999998864
No 288
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.86 E-value=0.05 Score=52.71 Aligned_cols=35 Identities=31% Similarity=0.275 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45689999999999999999999999999999853
No 289
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.85 E-value=0.066 Score=50.86 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=33.2
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3457899999999999999999999999999998753
No 290
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.85 E-value=0.046 Score=51.56 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|+|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3589999999999999999999999999999873
No 291
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.83 E-value=0.064 Score=52.37 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|+|||+|.+|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999999864
No 292
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.82 E-value=0.059 Score=51.46 Aligned_cols=35 Identities=31% Similarity=0.404 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
..++|+|||+|..|...|..|++.|+ +|+++|++.
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 999999864
No 293
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.77 E-value=0.049 Score=54.62 Aligned_cols=33 Identities=24% Similarity=0.496 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999874
No 294
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.76 E-value=0.069 Score=53.10 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=34.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
..+++|||+|.+|+.+|..|.+.|.+|+++|+.+.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh
Confidence 46899999999999999999999999999999876543
No 295
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.74 E-value=0.054 Score=50.75 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+.|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4678999999999999999999 999999999864
No 296
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.70 E-value=0.053 Score=51.55 Aligned_cols=32 Identities=31% Similarity=0.501 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 58999999999999999999999999999875
No 297
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.70 E-value=0.053 Score=51.94 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-+|..|++.|.+|+++++++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 346899999999999999999999999999998754
No 298
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.66 E-value=0.05 Score=56.28 Aligned_cols=36 Identities=14% Similarity=0.328 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 456899999999999999999999999999999864
No 299
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.65 E-value=0.067 Score=51.48 Aligned_cols=33 Identities=30% Similarity=0.285 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
.++|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999874
No 300
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.65 E-value=0.066 Score=55.66 Aligned_cols=37 Identities=30% Similarity=0.390 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+|+|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 187 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM 187 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc
Confidence 4589999999999999999999999999999987543
No 301
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=93.62 E-value=0.061 Score=54.85 Aligned_cols=35 Identities=29% Similarity=0.492 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+|+|+.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 232 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDT 232 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccc
Confidence 45899999999999999999999999999998754
No 302
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.59 E-value=0.061 Score=51.93 Aligned_cols=36 Identities=31% Similarity=0.465 Sum_probs=33.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
-.+.+|||+|||.+|..+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 356799999999999999999999998 999999984
No 303
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=93.59 E-value=0.069 Score=54.22 Aligned_cols=37 Identities=32% Similarity=0.410 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+-+|..|++.|.+|+|+++.+.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 4589999999999999999999999999999977644
No 304
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.58 E-value=0.07 Score=51.08 Aligned_cols=35 Identities=20% Similarity=0.124 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~-~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||.|.+|++ +|..|.++|++|++.|++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3568999999999997 7888999999999999864
No 305
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.58 E-value=0.06 Score=51.42 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 46899999999999999999999999999998643
No 306
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.53 E-value=0.064 Score=53.93 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=33.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC-CC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA-GH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~-g~-~v~v~E~~~~ 91 (540)
..++|.|||+|..|+..|..|++. |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999998765
No 307
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=93.52 E-value=0.073 Score=53.87 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||||.+|+.+|..|++.|.+|+++++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999998754
No 308
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.52 E-value=0.077 Score=52.96 Aligned_cols=36 Identities=19% Similarity=0.488 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...++.|||.|..|+..|..|++.|++|+++++++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 467899999999999999999999999999998764
No 309
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=93.50 E-value=0.063 Score=51.57 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-.|..|++.|.+|+++++++.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 356899999999999999999999999999997643
No 310
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=93.45 E-value=0.063 Score=51.05 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 180 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF 180 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc
Confidence 3468999999999999999999999999999987543
No 311
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.45 E-value=0.067 Score=51.80 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 312
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.44 E-value=0.082 Score=53.22 Aligned_cols=37 Identities=22% Similarity=0.347 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||+|.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 183 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL 183 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc
Confidence 4689999999999999999999999999999987654
No 313
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.36 E-value=0.061 Score=53.25 Aligned_cols=37 Identities=30% Similarity=0.502 Sum_probs=31.6
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 54 PSKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 54 ~~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
....++|.|||+|..|+..|..|++ |++|+++|.++.
T Consensus 33 ~~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 33 GSEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred ccCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3456799999999999999999998 999999998643
No 314
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=93.35 E-value=0.1 Score=49.56 Aligned_cols=55 Identities=18% Similarity=0.147 Sum_probs=43.3
Q ss_pred hhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEc---CCc--EEEcCEEEEccCHHH
Q 009198 285 CLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT---NGN--VIDGDAYVFATPVDI 340 (540)
Q Consensus 285 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~---~G~--~i~a~~VI~A~~~~~ 340 (540)
...+.+.+.+.|++|+++++|++|.. +++++.+|++. +|+ ++.+|.||+|+|...
T Consensus 193 ~~~l~~~l~~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 193 ENAYVQEIKKRNIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp CHHHHHHHHHTTCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred CHHHHHHHhcCCcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 45677788889999999999999986 44555566665 674 689999999998654
No 315
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.35 E-value=0.065 Score=53.89 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCc-eEEEecCCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARDVL 92 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~-v~v~E~~~~~ 92 (540)
...+|+|||+|.+|+-.|..|++.|.+ |+|+++++..
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 356899999999999999999999998 9999987643
No 316
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.31 E-value=0.073 Score=50.39 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||.|..|...|..|++.|++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 45689999999999999999999999999999864
No 317
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.30 E-value=0.069 Score=50.95 Aligned_cols=34 Identities=44% Similarity=0.609 Sum_probs=29.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...++|.|||+|..|.+.|..|++.|++|+++ ++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 35678999999999999999999999999999 65
No 318
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.28 E-value=0.074 Score=51.28 Aligned_cols=34 Identities=32% Similarity=0.601 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~ 89 (540)
.+.+|+|+|||.+|..+|..|...|. +|+|+|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56799999999999999999999998 89999987
No 319
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.26 E-value=0.079 Score=54.05 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=33.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~---g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+.+|..|++. |.+|+|+|+.+.+-
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 230 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL 230 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc
Confidence 45899999999999999999999 99999999987643
No 320
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.23 E-value=0.093 Score=50.19 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
..+|+|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999864
No 321
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.23 E-value=0.071 Score=50.56 Aligned_cols=33 Identities=36% Similarity=0.508 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
+++|+|||+|..|.+.|..|+ .|++|+++.++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 468999999999999999999 999999998763
No 322
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.21 E-value=0.084 Score=48.20 Aligned_cols=36 Identities=28% Similarity=0.405 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..++|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 567899999999999999999999999999998643
No 323
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.15 E-value=0.091 Score=49.27 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998743
No 324
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.12 E-value=0.085 Score=53.73 Aligned_cols=37 Identities=19% Similarity=0.246 Sum_probs=33.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHC---CCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA---GHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~---g~~v~v~E~~~~~g 93 (540)
..+++|||||.+|+.+|..|++. |.+|+|+|+.+.+.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l 226 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL 226 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc
Confidence 45899999999999999999999 99999999987644
No 325
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.10 E-value=0.065 Score=53.67 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|+..|..|++.|++|+++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999999864
No 326
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.00 E-value=0.11 Score=46.41 Aligned_cols=35 Identities=29% Similarity=0.238 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||+|..|...|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44689999999999999999999999999999864
No 327
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.99 E-value=0.081 Score=53.61 Aligned_cols=37 Identities=38% Similarity=0.477 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-CCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA-GHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~-g~~v~v~E~~~~~g 93 (540)
..+++|||+|.+|+.+|..|++. |.+|+++|+.+.+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l 196 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM 196 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc
Confidence 46899999999999999999999 99999999987543
No 328
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.96 E-value=0.097 Score=50.33 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
.+++|.|||+|..|...|..|++.|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5679999999999999999999999999999885
No 329
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.92 E-value=0.085 Score=50.35 Aligned_cols=36 Identities=25% Similarity=0.348 Sum_probs=32.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
+..++|.|||.|..|...|..|++.|++|+++++++
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 355789999999999999999999999999999864
No 330
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.87 E-value=0.099 Score=52.68 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999864
No 331
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.84 E-value=0.088 Score=50.39 Aligned_cols=37 Identities=24% Similarity=0.439 Sum_probs=33.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
...+++|||+|.+|+.+|..|++.|.+|+++++.+.+
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 3568999999999999999999999999999987654
No 332
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.82 E-value=0.12 Score=51.92 Aligned_cols=41 Identities=22% Similarity=0.269 Sum_probs=34.3
Q ss_pred CCCCCeEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhHHH
Q 009198 484 SPVEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYVLLA 526 (540)
Q Consensus 484 ~~~~~l~~aG~~~~~~~~~~~~ga~~sg~~aA~~v~~~l~~~~ 526 (540)
+..+|||.+||-+... ..+..|+..|+.||..|...|....
T Consensus 407 Ts~~~VfA~GD~~~g~--~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRGA--SLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp CSSTTEEECGGGGSSC--CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccCCc--hHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 4567899999987642 5899999999999999999997644
No 333
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.78 E-value=0.1 Score=49.26 Aligned_cols=33 Identities=27% Similarity=0.462 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
++|+|||+|..|.+.|+.|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999864
No 334
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.75 E-value=0.094 Score=50.91 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
++|.|||+|..|...|..|++.|++|++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 68999999999999999999999999999875
No 335
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=92.72 E-value=0.1 Score=53.61 Aligned_cols=36 Identities=17% Similarity=0.363 Sum_probs=33.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
.+++|||||.+|+.+|..|++.|.+|+++|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 689999999999999999999999999999987644
No 336
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.72 E-value=0.1 Score=49.74 Aligned_cols=34 Identities=18% Similarity=0.306 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
.++|+|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4689999999999999999999998 999999864
No 337
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.71 E-value=0.042 Score=55.31 Aligned_cols=36 Identities=22% Similarity=0.381 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..|+|+|+|+|-.|...|..|.+.|++|+|+|+++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 357899999999999999999999999999998754
No 338
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.67 E-value=0.1 Score=51.70 Aligned_cols=36 Identities=31% Similarity=0.446 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|+|||.|..|...|..|.+.|++|+++|.++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 345799999999999999999999999999998754
No 339
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=92.66 E-value=0.12 Score=54.10 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=33.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
..+++|||||.+|+.+|..|++.|.+|+++|+.+.+..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 224 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP 224 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc
Confidence 45899999999999999999999999999999876443
No 340
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.63 E-value=0.14 Score=48.38 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 341
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=92.58 E-value=0.13 Score=52.55 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=33.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||+|.+|+..|..|.+.|.+|+++|+.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 3589999999999999999999999999999987654
No 342
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.39 E-value=0.15 Score=48.67 Aligned_cols=34 Identities=21% Similarity=0.384 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
.++|+|||+|..|...|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4589999999999999999999998 999999764
No 343
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.39 E-value=0.087 Score=50.60 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEec
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~ 88 (540)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999998
No 344
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.38 E-value=0.094 Score=49.43 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
.++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 345
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.37 E-value=0.096 Score=53.81 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|+|||||.+|+-+|..|++.|.+|+++++.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 46899999999999999999999999999997643
No 346
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=92.33 E-value=0.079 Score=52.35 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|+..|..|++ |++|+++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999864
No 347
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.29 E-value=0.12 Score=52.19 Aligned_cols=35 Identities=29% Similarity=0.413 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|.|||+|..|...|..|++.|++|+++|++..
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 34799999999999999999999999999998753
No 348
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.26 E-value=0.1 Score=48.85 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998753
No 349
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.24 E-value=0.14 Score=48.56 Aligned_cols=33 Identities=33% Similarity=0.534 Sum_probs=29.8
Q ss_pred CeEEEECCChHHHHHHHHHHHC--CCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~ 90 (540)
++|+|||+|..|...|..|++. |++|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4799999999999999999985 78999999864
No 350
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.20 E-value=0.058 Score=44.62 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5689999999999999999999999999999864
No 351
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.19 E-value=0.11 Score=48.99 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999998864
No 352
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.09 E-value=0.15 Score=50.21 Aligned_cols=34 Identities=32% Similarity=0.496 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5689999999999999999999999999999864
No 353
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.05 E-value=0.055 Score=48.59 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=31.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
+..++|.|||+|..|.+.|..|++.|++|+++++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 34578999999999999999999999999999884
No 354
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.99 E-value=0.15 Score=48.26 Aligned_cols=35 Identities=29% Similarity=0.375 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCC
Confidence 46899999999999999999999999999998754
No 355
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.95 E-value=0.14 Score=49.56 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|.|||.|..|...|..|++.|++|++++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 356
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.93 E-value=0.15 Score=45.11 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=29.6
Q ss_pred CeEEEEC-CChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG-~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
++|+||| +|..|...|..|++.|++|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999 9999999999999999999999875
No 357
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.89 E-value=0.18 Score=46.36 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...++|||+|-+|.++|+.|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6789999999999999999999999999998864
No 358
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.87 E-value=0.14 Score=46.88 Aligned_cols=35 Identities=37% Similarity=0.528 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
..+|+|||+|-.|..+|..|++.|. +|+|+|....
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4689999999999999999999997 8999998754
No 359
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.85 E-value=0.18 Score=46.76 Aligned_cols=34 Identities=18% Similarity=0.138 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...++|+|+|-+|.++|..|++.|.+|+|++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4589999999999999999999999999998763
No 360
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.83 E-value=0.15 Score=48.44 Aligned_cols=34 Identities=21% Similarity=0.114 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC-CceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAG-HKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~~ 90 (540)
.++|.|||.|..|...|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999874
No 361
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.72 E-value=0.17 Score=47.81 Aligned_cols=35 Identities=34% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+++|||+|.+|+.+|..|.+.|.+|+++++.+.
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 46899999999999999999999999999998654
No 362
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.70 E-value=0.1 Score=49.61 Aligned_cols=32 Identities=25% Similarity=0.303 Sum_probs=29.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHC-----C-CceEEEec
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA-----G-HKPLLLEA 88 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~-----g-~~v~v~E~ 88 (540)
.++|.|||+|..|...|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999999 9 99999986
No 363
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=91.61 E-value=0.23 Score=51.31 Aligned_cols=38 Identities=39% Similarity=0.593 Sum_probs=34.5
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVL 92 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~ 92 (540)
+..+|++|||||++|+.+|.+|++.|.+|+|||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 46789999999999999999999999999999998653
No 364
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.59 E-value=0.23 Score=47.20 Aligned_cols=35 Identities=23% Similarity=0.284 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
.++|.|||+|..|...|..|++.|++|++++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998643
No 365
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.56 E-value=0.2 Score=47.47 Aligned_cols=33 Identities=36% Similarity=0.536 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
++|+|||+|..|...|+.|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 899999753
No 366
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.56 E-value=0.19 Score=50.73 Aligned_cols=37 Identities=24% Similarity=0.345 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||+|.+|+..|..|++.|.+|+++++.+.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l 206 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 5689999999999999999999999999999987543
No 367
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.53 E-value=0.11 Score=46.41 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEE-EecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLL-LEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v-~E~~~ 90 (540)
.++|.|||+|..|.+.|..|++.|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 46899999999999999999999999998 77654
No 368
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.51 E-value=0.2 Score=49.12 Aligned_cols=35 Identities=26% Similarity=0.449 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....|+|||+|.+|+.+|..|...|.+|+++|++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 369
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.48 E-value=0.2 Score=47.46 Aligned_cols=33 Identities=33% Similarity=0.436 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~ 89 (540)
..+|.|||+|..|.+.|+.|++.|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4589999999999999999999999 99999986
No 370
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.48 E-value=0.42 Score=44.51 Aligned_cols=62 Identities=15% Similarity=0.179 Sum_probs=49.1
Q ss_pred ceeeecCCCCccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 272 KMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 272 ~~~~~~gg~~~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
...+...+ +..+...+.+.+.+.|++|+. ++|++|.. ++ .|++.+|+++.+|.||+|+|...
T Consensus 165 ~v~~v~~~-~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 165 ETTFFTNG-IVEPDADQHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp EEEEECTT-TCCCCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEEC
T ss_pred cEEEEECC-CCCCCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCccc
Confidence 45555544 457888899999999999985 89999974 22 57888998999999999998753
No 371
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.45 E-value=0.22 Score=47.35 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
..+|+|||+|..|.+.|+.|+..|+ +|+++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999998 999999864
No 372
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.43 E-value=0.2 Score=50.92 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=33.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
..+++|||+|.+|+..|..|++.|.+|+++++.+.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l 227 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL 227 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc
Confidence 4589999999999999999999999999999987543
No 373
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.41 E-value=0.15 Score=51.61 Aligned_cols=34 Identities=26% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~ 90 (540)
.++|.|||+|..|+..|..|++. |++|++++++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999999753
No 374
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.38 E-value=0.16 Score=48.30 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~ 89 (540)
..++|.|||.|..|...|..|++.|+ +|++++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999985
No 375
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.37 E-value=0.22 Score=48.43 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
+.|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998654
No 376
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=91.35 E-value=0.13 Score=52.43 Aligned_cols=58 Identities=22% Similarity=0.243 Sum_probs=41.6
Q ss_pred CeEEEECCChHHHHHHHHHHHC--------------CCceEEEecCCCCCcceeeeccCCCCeeeccceeeccCcccHHH
Q 009198 58 LKVVIAGAGLAGLSTAKYLADA--------------GHKPLLLEARDVLGGKIAAWKDGDGDWYETGLHIFFGAYPNIQN 123 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~--------------g~~v~v~E~~~~~gG~~~~~~~~~g~~~d~G~~~~~~~~~~~~~ 123 (540)
..++|||||++|+.+|..|++. ..+|+|+|+.+.+-..... .....+.+
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~-----------------~~~~~~~~ 280 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEK-----------------KLSSYAQS 280 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCH-----------------HHHHHHHH
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCH-----------------HHHHHHHH
Confidence 4799999999999999988753 3589999998875543211 11224567
Q ss_pred HHHhcCCCc
Q 009198 124 LFGELGIND 132 (540)
Q Consensus 124 l~~~lgl~~ 132 (540)
.+++.|++.
T Consensus 281 ~L~~~GV~v 289 (502)
T 4g6h_A 281 HLENTSIKV 289 (502)
T ss_dssp HHHHTTCEE
T ss_pred HHHhcceee
Confidence 778888764
No 377
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.32 E-value=0.17 Score=47.01 Aligned_cols=33 Identities=30% Similarity=0.424 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 369999999999999999999999999998753
No 378
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.32 E-value=0.2 Score=48.07 Aligned_cols=35 Identities=29% Similarity=0.250 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|.|||.|..|.+.|..|.+.|++|+++++++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 44579999999999999999999999999999864
No 379
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.31 E-value=0.22 Score=47.30 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=31.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
..++|.|||.|..|.+.|..|++.|+ +|+++++++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 34689999999999999999999999 899998764
No 380
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.31 E-value=0.16 Score=48.34 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
++|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 479999999999999999999998 999999863
No 381
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.21 E-value=0.32 Score=46.19 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
...+|.|||+|..|.++|+.|+..|. +|+++|...
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45789999999999999999999987 899999753
No 382
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.16 E-value=0.19 Score=50.62 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHH--------------------HCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLA--------------------DAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~--------------------~~g~-~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++++.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 3568999999999999999999 5677 7999998754
No 383
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.16 E-value=0.23 Score=48.24 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..|+|+|+|.+|+.++..|+..|.+|++++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 384
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.05 E-value=0.23 Score=46.73 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.1
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG-~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|.||| +|..|.+.|..|++.|++|++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 45799999 99999999999999999999999764
No 385
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.01 E-value=0.19 Score=46.34 Aligned_cols=32 Identities=19% Similarity=0.243 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-CceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAG-HKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g-~~v~v~E~~ 89 (540)
++|.|||+|..|...|..|++.| ++|++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 36999999999999999999999 999999875
No 386
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.00 E-value=0.25 Score=43.81 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=29.5
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
++|+|+|| |..|...+..|+++|++|+++.++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 46999996 999999999999999999999876
No 387
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.99 E-value=0.17 Score=47.48 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
++|+|||+|..|.+.|+.|++.|+ +|+++|..+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999988 899999864
No 388
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=90.97 E-value=0.22 Score=47.34 Aligned_cols=35 Identities=31% Similarity=0.354 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
..++|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999987 899999753
No 389
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.94 E-value=0.21 Score=53.27 Aligned_cols=34 Identities=32% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 390
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.93 E-value=0.22 Score=48.54 Aligned_cols=34 Identities=32% Similarity=0.509 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...|+|+|+|..|+.+|..|+..|.+|++++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999764
No 391
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=90.91 E-value=0.19 Score=46.68 Aligned_cols=35 Identities=26% Similarity=0.141 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....++|+|+|-+|.++|+.|++.|.+|+|+.++.
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999998863
No 392
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.79 E-value=0.28 Score=45.69 Aligned_cols=34 Identities=35% Similarity=0.443 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+.|+|.|+|..|...+..|.++|++|+++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3579999999999999999999999999998764
No 393
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.78 E-value=0.16 Score=49.50 Aligned_cols=32 Identities=22% Similarity=0.302 Sum_probs=30.0
Q ss_pred eEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 59 dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
+|.|||+|..|...|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998763
No 394
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=90.78 E-value=0.22 Score=46.79 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 368999999999999999999999999998764
No 395
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.76 E-value=0.19 Score=47.58 Aligned_cols=33 Identities=27% Similarity=0.409 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCC--CceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAG--HKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g--~~v~v~E~~~ 90 (540)
++|+|||+|..|.+.|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 7899999863
No 396
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.72 E-value=0.2 Score=46.64 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+.|+|.|||..|...+..|.++|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4689999999999999999999999999998764
No 397
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=90.70 E-value=0.24 Score=49.92 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=32.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..++|.|||.|..|...|..|++.|++|++++++..
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998753
No 398
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.62 E-value=0.33 Score=45.34 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=31.2
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|.|||+ |..|...|..|++.|++|++++++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 468999999 9999999999999999999999764
No 399
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.61 E-value=0.25 Score=46.45 Aligned_cols=35 Identities=11% Similarity=0.075 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
....++|||+|-+|.++|..|++.|. +|+|+.+..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34689999999999999999999998 899998863
No 400
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.56 E-value=0.18 Score=50.83 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~~ 90 (540)
.++|.|||+|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 89999999864
No 401
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.48 E-value=0.29 Score=43.61 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=29.6
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCceEEEecC
Q 009198 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
++|+|.|| |..|...+..|+++|++|+++.++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 46999998 999999999999999999999875
No 402
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.38 E-value=0.21 Score=47.00 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998763
No 403
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.36 E-value=0.32 Score=46.21 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
..+|+|||+|..|.+.|+.|+..|. +|+++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3589999999999999999999988 999999864
No 404
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.28 E-value=0.25 Score=46.57 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
...+|+|||+|..|...|+.|+..|+ +|+|+|...
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 34689999999999999999999998 899999865
No 405
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.27 E-value=0.27 Score=46.91 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=30.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCC----CceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g----~~v~v~E~~~ 90 (540)
..++|.|||+|..|.+.|..|++.| ++|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3468999999999999999999999 7999998764
No 406
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.26 E-value=0.23 Score=46.80 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998753
No 407
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.26 E-value=0.25 Score=49.63 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
....|+|||+|-+|...|..|.+.|.+|+|++.+
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3568999999999999999999999999999975
No 408
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.26 E-value=0.33 Score=45.51 Aligned_cols=33 Identities=24% Similarity=0.579 Sum_probs=30.3
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
|+|+|.|| |..|...+..|.++|++|+++-|++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~ 34 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKP 34 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 57999998 9999999999999999999997754
No 409
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.21 E-value=0.28 Score=46.62 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
...+|+|||+|..|.+.|+.|+..|. +|+++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 35689999999999999999999987 89999975
No 410
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.19 E-value=0.25 Score=46.73 Aligned_cols=33 Identities=27% Similarity=0.519 Sum_probs=29.9
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
++|+|||+|..|.+.|+.|++.|. +|+++|...
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999887 899999864
No 411
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.16 E-value=0.21 Score=50.52 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+++|.|||+|..|...|..|++.|++|++++++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999999864
No 412
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.14 E-value=0.21 Score=49.49 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
.+.-|||.|..|+..|..|++.|++|+++|.++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4788999999999999999999999999998754
No 413
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=90.07 E-value=0.27 Score=49.97 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHH----CCCceEEEecCCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLAD----AGHKPLLLEARDVL 92 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~----~g~~v~v~E~~~~~ 92 (540)
..+|+|||||.+|+-+|..|++ .|.+|+++++.+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~ 219 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGN 219 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccc
Confidence 4689999999999999999987 47899999987543
No 414
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=90.05 E-value=0.68 Score=45.14 Aligned_cols=47 Identities=21% Similarity=0.171 Sum_probs=38.5
Q ss_pred ccchhHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHHH
Q 009198 282 ERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDIL 341 (540)
Q Consensus 282 ~~l~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~~ 341 (540)
..+.+.|.+.+.+.|++|+++++|++|+. . +++.||.||.|.|.+..
T Consensus 98 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 98 RGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCch
Confidence 46788888899888999999999999853 1 12579999999999765
No 415
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.03 E-value=0.31 Score=49.39 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 416
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.98 E-value=0.33 Score=47.37 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....|+|||+|..|+.+|..|+..|.+|++++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35689999999999999999999999999999764
No 417
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.98 E-value=0.2 Score=48.98 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g-------~~v~v~E~~~~ 91 (540)
++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998654
No 418
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.92 E-value=0.31 Score=44.40 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC----ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH----KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~----~v~v~E~~~ 90 (540)
++|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 999999864
No 419
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.88 E-value=0.24 Score=47.64 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=29.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+|+|||+|.+|+-+|..|++.| +|++++++
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 3568999999999999999999998 69999876
No 420
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.85 E-value=0.26 Score=45.32 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHHCC----CceEEEecCCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAG----HKPLLLEARDV 91 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g----~~v~v~E~~~~ 91 (540)
.++|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998654
No 421
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=89.84 E-value=0.26 Score=52.81 Aligned_cols=35 Identities=29% Similarity=0.274 Sum_probs=32.0
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG--~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|+||| ||.+|+-+|..|++.|.+|+|+++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 356899999 99999999999999999999999865
No 422
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.78 E-value=0.33 Score=45.19 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
++|.|||+|..|.+.|..|++.|+ +|++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89999875
No 423
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.77 E-value=0.28 Score=45.42 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
....++|||+|-+|.++|+.|++.|. +|+|+.|...
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 45689999999999999999999998 8999988753
No 424
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.77 E-value=0.35 Score=46.00 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
...+|+|||+|-.|..+|..|+..|. +++|+|....
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 46799999999999999999999997 7999998654
No 425
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.76 E-value=0.44 Score=50.73 Aligned_cols=39 Identities=21% Similarity=0.171 Sum_probs=34.7
Q ss_pred CCCeEEEEC--CChHHHHHHHHHHHCCCceEEEecCCCCCc
Q 009198 56 KPLKVVIAG--AGLAGLSTAKYLADAGHKPLLLEARDVLGG 94 (540)
Q Consensus 56 ~~~dv~IiG--~G~~Gl~~A~~L~~~g~~v~v~E~~~~~gG 94 (540)
...+|+||| +|.+|+.+|..|++.|.+|+++++.+.+..
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~ 562 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS 562 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc
Confidence 455899999 999999999999999999999999877654
No 426
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.75 E-value=0.31 Score=49.36 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 427
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=89.73 E-value=0.26 Score=52.54 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999864
No 428
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.69 E-value=0.17 Score=48.96 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCC-------CceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAG-------HKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g-------~~v~v~E~~~~ 91 (540)
++|.|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 58999999999999999999999 89999998654
No 429
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.69 E-value=0.15 Score=46.15 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+++|+|+|..|...|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 45689999999999999999999999 999998753
No 430
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.64 E-value=0.27 Score=45.97 Aligned_cols=32 Identities=28% Similarity=0.261 Sum_probs=29.1
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 469999999999999999999 99999998753
No 431
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.57 E-value=0.31 Score=47.24 Aligned_cols=40 Identities=28% Similarity=0.432 Sum_probs=34.6
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCC---ceEEEecCC-CCCcc
Q 009198 56 KPLKVVIAGA-GLAGLSTAKYLADAGH---KPLLLEARD-VLGGK 95 (540)
Q Consensus 56 ~~~dv~IiG~-G~~Gl~~A~~L~~~g~---~v~v~E~~~-~~gG~ 95 (540)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4679999999 9999999999999997 999999876 44543
No 432
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.53 E-value=0.26 Score=45.90 Aligned_cols=36 Identities=36% Similarity=0.506 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45699999999999999999999997 8999998654
No 433
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=89.41 E-value=0.35 Score=44.18 Aligned_cols=36 Identities=39% Similarity=0.481 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 35699999999999999999999997 7999998654
No 434
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.39 E-value=0.29 Score=54.65 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
.+|+|||||.+|+-+|..|++.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 389999999999999999999996 899999876
No 435
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.38 E-value=0.3 Score=49.31 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999863
No 436
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=89.33 E-value=0.3 Score=45.29 Aligned_cols=35 Identities=26% Similarity=0.316 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....++|||+|.+|.+.|..|.+.|.+|++++++.
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34689999999999999999999999999999863
No 437
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=89.31 E-value=0.41 Score=41.76 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.6
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
+.|+|+|| |..|...+..|.++|++|+++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999998864
No 438
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=89.29 E-value=0.33 Score=45.74 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=30.5
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G-~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+++|||+| +.|..+|..|...|.+|+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 56799999999 67999999999999999999765
No 439
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.28 E-value=0.42 Score=45.12 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=31.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~ 89 (540)
....++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 45689999999999999999999998 89999886
No 440
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.28 E-value=0.38 Score=44.62 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
....++|||+|-+|.++|+.|.+.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45689999999999999999999998 899998764
No 441
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.27 E-value=0.46 Score=45.18 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=31.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
....+|+|||+|..|.++|+.|+..|. +++++|..
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 356799999999999999999999987 89999975
No 442
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.26 E-value=0.43 Score=44.36 Aligned_cols=34 Identities=12% Similarity=0.074 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC---ceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH---KPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~---~v~v~E~~~ 90 (540)
.++|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3579999999999999999999998 899999864
No 443
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.24 E-value=0.42 Score=45.01 Aligned_cols=35 Identities=20% Similarity=0.291 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....|.|||+|..|..+|..|...|.+|++++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45689999999999999999999999999999864
No 444
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=89.22 E-value=0.42 Score=43.61 Aligned_cols=32 Identities=25% Similarity=0.231 Sum_probs=30.1
Q ss_pred eEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 59 KVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 59 dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
.++|||+|-+|.++++.|.+.|. +|+|++|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899999864
No 445
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=89.14 E-value=0.31 Score=44.67 Aligned_cols=34 Identities=21% Similarity=0.248 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 3689999999999999999999999999998753
No 446
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.07 E-value=0.18 Score=49.78 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=28.1
Q ss_pred CeEEEECCChHHHHHHHHHHH-CCCceEEEe
Q 009198 58 LKVVIAGAGLAGLSTAKYLAD-AGHKPLLLE 87 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~-~g~~v~v~E 87 (540)
++|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 499999998
No 447
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=89.02 E-value=0.32 Score=44.72 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=28.4
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEec
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEA 88 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~ 88 (540)
++|.|||+|..|...|..|++.|++|+++++
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 3689999999999999999999999999765
No 448
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.01 E-value=0.45 Score=43.95 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
....++|+|+|-+|.++|+.|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45689999999999999999999996 899998753
No 449
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.00 E-value=0.45 Score=44.24 Aligned_cols=35 Identities=31% Similarity=0.241 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
....++|+|+|-+|.++|+.|++.|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 45689999999999999999999998 699998764
No 450
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=88.98 E-value=0.44 Score=50.66 Aligned_cols=36 Identities=22% Similarity=0.201 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
.-..|.|||||..|...|+.+++.|++|+++|.++.
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 345899999999999999999999999999997653
No 451
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.95 E-value=0.46 Score=44.54 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....|.|||+|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45689999999999999999999999999999864
No 452
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.91 E-value=0.45 Score=45.15 Aligned_cols=52 Identities=12% Similarity=0.093 Sum_probs=39.3
Q ss_pred hHHHHHHHHcCcEEEeCcceeEEEEccCCcEEEEEEcC-----CcEEEcCEEEEccCHH
Q 009198 286 LPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVD 339 (540)
Q Consensus 286 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~-----G~~i~a~~VI~A~~~~ 339 (540)
....+.+.+.|+++++++.|++|..+ ++ ...|++.+ ++++.+|.||+|+|..
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGE-DK-IEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECS-SS-CCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecC-Cc-eEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 34556688899999999999999863 33 34566655 3579999999998854
No 453
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.89 E-value=0.41 Score=45.98 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=30.7
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 55 ~~~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 35568999998 99999999999999999999988753
No 454
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=88.83 E-value=0.32 Score=45.72 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=28.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
.+|.+||-|..|...|..|++.|++|+++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998643
No 455
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.80 E-value=0.41 Score=45.48 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
...+|+|||+|..|.++|+.|+..|. +++++|..
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45689999999999999999999887 89999975
No 456
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.74 E-value=0.4 Score=47.93 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....++|+|+|..|..+|..|+..|.+|++.|.++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45689999999999999999999999999999764
No 457
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=88.69 E-value=0.27 Score=46.13 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=29.6
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 589999999999999999999999999998 54
No 458
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.68 E-value=0.45 Score=45.62 Aligned_cols=34 Identities=29% Similarity=0.236 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+.|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 3479999999999999999999999999998864
No 459
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.62 E-value=0.47 Score=44.07 Aligned_cols=35 Identities=23% Similarity=0.155 Sum_probs=31.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
....++|+|+|-+|.++|+.|++.|. +|+|+.+..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 45689999999999999999999996 899998863
No 460
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.61 E-value=0.34 Score=44.68 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCc-eEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHK-PLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~-v~v~E~~~ 90 (540)
.++|.|||+|..|...|..|++.|++ |++++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999998 89998764
No 461
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.60 E-value=0.23 Score=55.01 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=32.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCCCCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDVLG 93 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~~g 93 (540)
.+|+|||+|.+|+.+|..|++.|.+|+|+|+.+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~ 320 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS 320 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc
Confidence 579999999999999999999999999999887643
No 462
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.44 E-value=0.4 Score=48.14 Aligned_cols=36 Identities=22% Similarity=0.398 Sum_probs=30.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHHC--------------------C-CceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADA--------------------G-HKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~--------------------g-~~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-+|..|++. | .+|+|++++..
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 356899999999999999999974 5 48999998754
No 463
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=88.40 E-value=0.35 Score=45.19 Aligned_cols=32 Identities=28% Similarity=0.266 Sum_probs=29.4
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...++|+|+|-+|.++|..|++.| +|+|+.++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 458999999999999999999999 99999875
No 464
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.27 E-value=0.55 Score=44.92 Aligned_cols=33 Identities=27% Similarity=0.260 Sum_probs=29.6
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 57 PLKVVIAGA-GLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~-G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
..+|+|||+ |..|.++|+.|+..|. +|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 468999997 9999999999999985 89999974
No 465
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=88.23 E-value=0.56 Score=44.21 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=31.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~ 89 (540)
....++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45689999999999999999999998 79999886
No 466
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.03 E-value=0.47 Score=45.00 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=30.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
...+|+|||+|..|.+.|+.|+..|. +|+++|.+.
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 34689999999999999999998875 799999763
No 467
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=87.88 E-value=0.5 Score=46.66 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=29.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC---ceEEEe
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH---KPLLLE 87 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~---~v~v~E 87 (540)
...+|+|+|+|-+|.++|..|.+.|. +|+|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45689999999999999999999997 899999
No 468
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=87.81 E-value=0.45 Score=45.06 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=29.7
Q ss_pred CeEEEECC-ChHHHHHHHHHHHCC--CceEEEecCC
Q 009198 58 LKVVIAGA-GLAGLSTAKYLADAG--HKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~-G~~Gl~~A~~L~~~g--~~v~v~E~~~ 90 (540)
++|+|||| |..|...|+.|++.| .+|+++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999888 6899999875
No 469
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=87.74 E-value=0.46 Score=42.35 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=30.9
Q ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.+.|+|.|| |..|...+..|+++|++|+++.++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 468999995 9999999999999999999999864
No 470
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.72 E-value=0.62 Score=43.98 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+.|+|.|| |..|...+..|+++|++|+++.+...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999988654
No 471
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=87.65 E-value=0.44 Score=44.48 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=29.0
Q ss_pred CeEEEECCChHHHHHHHHHHHCCC--ceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGH--KPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~~ 90 (540)
++|.|||+|-.|.++|+.|..++. +++|+|...
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~ 35 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 579999999999999999998875 799999753
No 472
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.64 E-value=0.52 Score=44.83 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.6
Q ss_pred CCCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 55 SKPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 55 ~~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
...++|+|||+|..|.+.|+.|+..+. +++++|..
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 455799999999999999999998876 79999874
No 473
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.63 E-value=0.43 Score=49.19 Aligned_cols=36 Identities=14% Similarity=0.291 Sum_probs=32.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 457899999999999999999999999999998653
No 474
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.61 E-value=0.55 Score=43.15 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 59 KVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 59 dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
.++|||+|-+|.+.|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998763
No 475
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=87.58 E-value=0.56 Score=43.27 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC-ceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~ 89 (540)
...++|||+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999997 89999875
No 476
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.37 E-value=0.53 Score=44.67 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.5
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
.++|+|||+|..|.+.|+.|+..|. +|+++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 4689999999999999999998885 79999865
No 477
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.24 E-value=0.52 Score=47.54 Aligned_cols=33 Identities=12% Similarity=0.166 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
++|.|||+|..|...|..|++.|++|++++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999864
No 478
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=87.22 E-value=0.91 Score=43.23 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.3
Q ss_pred CCCCeEEEECC-ChHHHHHHHHHHHCCCceEEEecC
Q 009198 55 SKPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 55 ~~~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+.|+|.|| |..|...+..|+++|++|+++.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34568999998 999999999999999999999875
No 479
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=87.20 E-value=0.53 Score=45.37 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 35689999999999999999999998 7999998644
No 480
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.13 E-value=0.51 Score=41.82 Aligned_cols=33 Identities=24% Similarity=0.270 Sum_probs=30.1
Q ss_pred CeEEEEC-CChHHHHHHHHHHHCCCceEEEecCC
Q 009198 58 LKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 58 ~dv~IiG-~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
+.|+|.| +|..|...+..|+++|++|+++.++.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 3699999 79999999999999999999999874
No 481
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.97 E-value=0.7 Score=44.00 Aligned_cols=35 Identities=20% Similarity=0.413 Sum_probs=31.3
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+.|+|.|| |..|...+..|++.|++|+++.+..
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4468999998 9999999999999999999999853
No 482
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=86.93 E-value=0.12 Score=45.48 Aligned_cols=35 Identities=23% Similarity=0.150 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..++|.|||+|..|...|..|.+.|++|++++++.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 45679999999999999999999999999998764
No 483
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=86.91 E-value=0.69 Score=44.62 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
..+.|+|+|+|-.|..+|..|.+.|.+|++.|..
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4568999999999999999999999999999864
No 484
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=86.87 E-value=0.35 Score=48.21 Aligned_cols=44 Identities=20% Similarity=0.249 Sum_probs=34.4
Q ss_pred HHHcCcEEEeCcceeEEEEccCCcEEEEEEcCCcEEEcCEEEEccCHHH
Q 009198 292 IQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDI 340 (540)
Q Consensus 292 l~~~G~~i~~~t~V~~I~~~~~~~~~~V~~~~G~~i~a~~VI~A~~~~~ 340 (540)
+.+.|++++.+ +|++|.. ++ + .|++.+|+++.+|++|+|||...
T Consensus 66 ~~~~gv~~i~~-~v~~Id~-~~-~--~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 66 LPKFNIEFINE-KAESIDP-DA-N--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp GGGGTEEEECS-CEEEEET-TT-T--EEEETTCCEEECSEEEECCCCEE
T ss_pred HHHCCcEEEEe-EEEEEEC-CC-C--EEEECCCCEEECCEEEEeCCCCc
Confidence 34568998655 7999985 33 3 27889999999999999999753
No 485
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.83 E-value=0.73 Score=44.05 Aligned_cols=36 Identities=19% Similarity=0.117 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~~ 91 (540)
..+.|.|||.|..|...|..|+..|++|++++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 456899999999999999999999999999998653
No 486
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.78 E-value=0.76 Score=42.86 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=30.7
Q ss_pred CCeEEEEC-CChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAG-AGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG-~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
...++|+| +|-+|.++|..|++.|.+|+++.++.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 46899999 99999999999999999999998763
No 487
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.75 E-value=0.64 Score=45.58 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....|+|||.|..|..+|..|...|.+|++.|.++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45689999999999999999999999999999764
No 488
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.74 E-value=0.78 Score=40.66 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=28.9
Q ss_pred eEEEECC-ChHHHHHHHHHH-HCCCceEEEecCC
Q 009198 59 KVVIAGA-GLAGLSTAKYLA-DAGHKPLLLEARD 90 (540)
Q Consensus 59 dv~IiG~-G~~Gl~~A~~L~-~~g~~v~v~E~~~ 90 (540)
.|+|.|| |..|...|..|+ +.|++|+++.++.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 4999995 999999999999 8999999998863
No 489
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.68 E-value=0.73 Score=47.26 Aligned_cols=41 Identities=27% Similarity=0.272 Sum_probs=34.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCCCCcce
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDVLGGKI 96 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~~gG~~ 96 (540)
...+|+|||+|-.|..+|..|++.|. +++|+|....--...
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL 366 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNP 366 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGG
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCc
Confidence 46799999999999999999999998 899999876544333
No 490
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.51 E-value=0.63 Score=46.84 Aligned_cols=35 Identities=26% Similarity=0.289 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
....|+|||.|..|..+|..|...|.+|+++|..+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999764
No 491
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=86.48 E-value=0.77 Score=42.58 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=30.5
Q ss_pred CCCeEEEECCC-hHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGAG-LAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G-~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+++|||+| +.|.-+|..|.+.|..|+++.+.
T Consensus 164 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 56799999999 68999999999999999999743
No 492
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=86.48 E-value=0.5 Score=47.99 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.7
Q ss_pred CCCeEEEECCChHHHH-HHHHHHHCCCceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLS-TAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~-~A~~L~~~g~~v~v~E~~~ 90 (540)
...+|.|||.|-+|++ +|..|.++|++|++.|.+.
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 3468999999999997 6999999999999999764
No 493
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=86.48 E-value=0.59 Score=43.91 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHHCCCceEEEecCC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADAGHKPLLLEARD 90 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~g~~v~v~E~~~ 90 (540)
..+|-+||-|..|...|..|.+.|++|+++++++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3479999999999999999999999999999864
No 494
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=86.36 E-value=0.63 Score=47.66 Aligned_cols=36 Identities=31% Similarity=0.378 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~~ 91 (540)
...+|+|||+|-.|..+|..|++.|. +++|+|....
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 35799999999999999999999998 7999997654
No 495
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.35 E-value=0.64 Score=43.37 Aligned_cols=33 Identities=27% Similarity=0.204 Sum_probs=29.0
Q ss_pred CCeEEEECCChHHHHHHHHHHHC--CCceEEEecC
Q 009198 57 PLKVVIAGAGLAGLSTAKYLADA--GHKPLLLEAR 89 (540)
Q Consensus 57 ~~dv~IiG~G~~Gl~~A~~L~~~--g~~v~v~E~~ 89 (540)
.++|.|||+|..|.+.|..|++. |++|++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 35899999999999999999988 5789998875
No 496
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=86.22 E-value=0.81 Score=42.45 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=30.2
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHHCCCceEEEecC
Q 009198 56 KPLKVVIAGA-GLAGLSTAKYLADAGHKPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~-G~~Gl~~A~~L~~~g~~v~v~E~~ 89 (540)
...+++|||. |+.|..+|..|.+.|..|+++.++
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 5679999995 568999999999999999999873
No 497
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.19 E-value=0.61 Score=44.23 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=30.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC--ceEEEecC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH--KPLLLEAR 89 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~--~v~v~E~~ 89 (540)
..++|+|||+|..|.+.|+.|+..+. +|+++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34799999999999999999998876 79999974
No 498
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=86.07 E-value=0.52 Score=44.85 Aligned_cols=41 Identities=22% Similarity=0.326 Sum_probs=31.0
Q ss_pred CCCCCCeEEecccccCCC-----CCchHHHHHHHHHHHHHHHHHHh
Q 009198 483 RSPVEGFYLAGDYTKQKY-----LASMEGAVLSGKLCAQAIVQDYV 523 (540)
Q Consensus 483 ~~~~~~l~~aG~~~~~~~-----~~~~~ga~~sg~~aA~~v~~~l~ 523 (540)
.+..||||.|||.+...+ ...+-+++.||++||+.|++.|.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 456889999999764211 12556778999999999999885
No 499
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=85.97 E-value=0.55 Score=44.74 Aligned_cols=36 Identities=25% Similarity=0.218 Sum_probs=30.5
Q ss_pred CCCeEEEEC-CChHHHHHHHHHHHCC--CceEEEecCCC
Q 009198 56 KPLKVVIAG-AGLAGLSTAKYLADAG--HKPLLLEARDV 91 (540)
Q Consensus 56 ~~~dv~IiG-~G~~Gl~~A~~L~~~g--~~v~v~E~~~~ 91 (540)
..++|+||| +|..|.+.|..|++.| .+|+++|....
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~ 45 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA 45 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence 346899999 7999999999999988 68999996543
No 500
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=85.89 E-value=0.67 Score=45.65 Aligned_cols=35 Identities=31% Similarity=0.388 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHHCCC-ceEEEecCC
Q 009198 56 KPLKVVIAGAGLAGLSTAKYLADAGH-KPLLLEARD 90 (540)
Q Consensus 56 ~~~dv~IiG~G~~Gl~~A~~L~~~g~-~v~v~E~~~ 90 (540)
....|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45689999999999999999999998 899999864
Done!