Query 009200
Match_columns 540
No_of_seqs 240 out of 844
Neff 6.4
Searched_HMMs 46136
Date Thu Mar 28 21:38:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009200.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009200hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2515 Mannosyltransferase [C 100.0 1E-128 3E-133 999.0 31.3 475 37-513 6-495 (568)
2 PLN02816 mannosyltransferase 100.0 7.9E-80 1.7E-84 673.6 42.8 407 46-475 39-473 (546)
3 PF03901 Glyco_transf_22: Alg9 100.0 1.1E-74 2.3E-79 619.9 33.2 390 48-451 2-418 (418)
4 KOG1771 GPI-alpha-mannosyltran 100.0 1.8E-67 3.9E-72 536.1 18.5 369 48-475 6-393 (464)
5 KOG2516 Protein involved in do 100.0 2E-43 4.4E-48 361.3 22.4 301 59-369 12-325 (517)
6 KOG4123 Putative alpha 1,2 man 100.0 9.9E-33 2.1E-37 284.6 22.9 304 45-363 7-344 (550)
7 TIGR03663 conserved hypothetic 99.2 9.5E-08 2.1E-12 103.8 35.0 304 48-370 7-346 (439)
8 PRK13279 arnT 4-amino-4-deoxy- 99.1 1.1E-07 2.3E-12 105.8 31.6 293 58-368 20-337 (552)
9 COG1807 ArnT 4-amino-4-deoxy-L 98.0 0.027 5.8E-07 62.8 33.7 149 65-221 30-186 (535)
10 PF09852 DUF2079: Predicted me 97.6 0.049 1.1E-06 59.7 26.8 102 129-231 62-165 (449)
11 PF13231 PMT_2: Dolichyl-phosp 97.4 0.013 2.9E-07 53.4 17.0 115 112-231 11-132 (159)
12 TIGR03766 conserved hypothetic 97.3 0.13 2.7E-06 57.1 26.9 169 47-230 70-252 (483)
13 PF09913 DUF2142: Predicted me 97.0 0.13 2.7E-06 55.0 21.9 77 114-196 109-185 (389)
14 PF04188 Mannosyl_trans2: Mann 96.3 0.19 4.1E-06 55.1 17.3 162 137-303 123-308 (443)
15 COG5542 Predicted integral mem 95.9 0.42 9E-06 51.4 16.8 170 127-299 117-302 (420)
16 PF04922 DIE2_ALG10: DIE2/ALG1 92.0 3.7 8E-05 44.3 14.4 142 68-220 9-155 (379)
17 COG1287 Uncharacterized membra 90.8 13 0.00029 43.7 18.8 102 65-169 48-154 (773)
18 PLN02841 GPI mannosyltransfera 89.4 16 0.00036 40.0 16.6 163 47-228 10-184 (440)
19 PF09594 DUF2029: Protein of u 89.3 22 0.00048 34.5 23.1 124 101-237 1-130 (241)
20 PF02366 PMT: Dolichyl-phospha 88.3 28 0.00062 34.5 20.2 71 126-196 82-153 (245)
21 PF09586 YfhO: Bacterial membr 84.0 97 0.0021 36.6 28.0 26 345-370 338-363 (843)
22 PF10131 PTPS_related: 6-pyruv 82.9 97 0.0021 35.7 26.9 23 345-367 257-279 (616)
23 COG4745 Predicted membrane-bou 78.5 23 0.00049 39.1 11.4 129 51-196 24-153 (556)
24 PF11028 DUF2723: Protein of u 77.3 72 0.0016 30.8 14.0 47 106-154 22-68 (178)
25 PF14897 EpsG: EpsG family 76.6 47 0.001 33.8 13.1 43 180-224 115-157 (330)
26 TIGR03459 crt_membr carotene b 75.5 1.4E+02 0.003 33.2 17.9 110 115-228 155-265 (470)
27 KOG3893 Mannosyltransferase [C 73.5 59 0.0013 34.4 12.4 150 43-210 19-180 (405)
28 KOG2575 Glucosyltransferase - 66.8 2E+02 0.0044 31.5 27.4 138 86-230 90-243 (510)
29 COG1928 PMT1 Dolichyl-phosphat 66.6 2.6E+02 0.0057 32.7 17.2 141 47-196 29-180 (699)
30 KOG2647 Predicted Dolichyl-pho 64.0 1.6E+02 0.0035 32.2 13.8 75 136-211 135-210 (444)
31 KOG2292 Oligosaccharyltransfer 63.1 69 0.0015 36.1 10.9 112 53-169 34-159 (751)
32 PF06728 PIG-U: GPI transamida 55.5 3E+02 0.0064 29.7 24.6 73 156-229 122-194 (382)
33 PF02516 STT3: Oligosaccharyl 55.5 76 0.0017 34.6 10.1 103 65-169 29-137 (483)
34 KOG2762 Mannosyltransferase [C 45.3 4.2E+02 0.009 28.7 12.8 75 155-231 132-207 (429)
35 PF05208 ALG3: ALG3 protein; 41.4 4.9E+02 0.011 28.1 15.7 81 155-237 104-187 (368)
36 PF11847 DUF3367: Domain of un 39.2 6.9E+02 0.015 29.3 16.6 88 104-195 55-144 (680)
37 COG5650 Predicted integral mem 39.0 90 0.002 35.1 7.2 126 159-290 199-334 (536)
38 KOG2552 Major facilitator supe 36.8 3.7E+02 0.008 29.0 11.0 73 155-228 144-216 (388)
39 KOG3359 Dolichyl-phosphate-man 35.6 8E+02 0.017 28.9 18.7 71 125-196 118-190 (723)
40 PF05007 Mannosyl_trans: Manno 32.5 2.7E+02 0.0059 28.5 9.1 54 174-228 2-55 (259)
41 COG5305 Predicted membrane pro 31.5 8.4E+02 0.018 27.9 19.4 71 126-196 116-186 (552)
42 PF10190 Tmemb_170: Putative t 29.4 72 0.0016 28.2 3.7 20 335-355 29-48 (105)
43 PRK13375 pimE mannosyltransfer 22.1 1.1E+03 0.023 26.0 20.2 57 180-245 156-213 (409)
44 PHA02887 EGF-like protein; Pro 20.4 28 0.0006 31.3 -0.5 20 500-519 96-115 (126)
45 KOG1771 GPI-alpha-mannosyltran 20.1 31 0.00067 37.4 -0.4 38 65-104 174-211 (464)
No 1
>KOG2515 consensus Mannosyltransferase [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-128 Score=998.96 Aligned_cols=475 Identities=45% Similarity=0.756 Sum_probs=422.0
Q ss_pred CcccccCChHHHHHHHHHHHHHHhhhcCCCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHH
Q 009200 37 REEEKSLGWFVPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASW 116 (540)
Q Consensus 37 ~~~~~~~~~~~~~~~ll~~Rl~~al~~~i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~ 116 (540)
+++....++.++|++++..|+.+|.++.|+||||+||||||+|++++|+|+|||||||+|+||||+|+++|++++++..+
T Consensus 6 ~gn~~~~s~~~~Fk~lls~Rl~sA~~~iI~DCDEvfNYWEPLHyllyG~GfQTWEYSP~yaiRSy~Yillh~~pg~~~a~ 85 (568)
T KOG2515|consen 6 PGNCWAVSFSTAFKLLLSLRLCSATFSIISDCDEVFNYWEPLHYLLYGEGFQTWEYSPEYAIRSYAYILLHYVPGYFVAK 85 (568)
T ss_pred CCCccceeeHHHHHHHHHHHHHHHHHHhhhcchhhhhcchhhhhHhhcccccceeeCchhHHHHHHHHHHHHcchHHHHH
Confidence 34566688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh
Q 009200 117 LFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL 196 (540)
Q Consensus 117 ~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~ 196 (540)
++|++|.++||++|+.+|++|+++|.+++++++|.+|.++|+.+++++++|.|||++||++|||||+|+++.+|++.|+.
T Consensus 86 ~fg~~ki~vFy~vR~~Lg~fsai~E~~l~~ai~~kf~~~ia~~~i~f~~fssGmF~aStafLPSSF~M~~~~~al~a~l~ 165 (568)
T KOG2515|consen 86 LFGLSKILVFYFVRLCLGFFSAIMETYLYKAICRKFGLAIARIWIIFLLFSSGMFHASTAFLPSSFAMYLTVLALGAWLT 165 (568)
T ss_pred hcCCCceEeehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceeeechhcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH--HHHH-HHHHHHHHHHHHHHHHHHHHhhhcCcccchhhhhhhhh
Q 009200 197 EKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR--RFKQ-AFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYN 273 (540)
Q Consensus 197 ~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~--~~~~-~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~~lN~l~yN 273 (540)
+|+..+++..++|+++||||++++++|+++.++.. +++. ++.+...+++..++.++++||+||||++++|||++.||
T Consensus 166 ~n~~~av~~~a~gailGWPFsa~l~lPi~~~lll~k~r~k~~F~~~~l~~~~~~~v~~i~~Ds~yygkl~~a~lNIv~YN 245 (568)
T KOG2515|consen 166 ENYTKAVAYVAIGAILGWPFSALLGLPILLELLLLKHRFKSTFITWFLCILILLLVPVIVTDSYYYGKLTFAPLNIVLYN 245 (568)
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHhccceEEEeehhhccceeeeeeeEEEe
Confidence 99999999999999999999999999988777653 6776 45556666666667789999999999999999999999
Q ss_pred hcCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHh----hhhccCc-chhHHHHHHHHHHHHHhcCCCcccch
Q 009200 274 VVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPI----ARKKYAP-GLVVVVSPVYIWLLFMSMQPHKEERF 348 (540)
Q Consensus 274 v~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~~~~~~----~~~~~~~-~~~~~l~~~~~wl~i~S~~pHKE~RF 348 (540)
|++++||++||||||+||+.|+++|||+++.+|++..+...+ .+.+.+. ..-.++.|+++|+++++.||||||||
T Consensus 246 V~~~~gP~iyGtEP~~yYi~NlflNfNi~~~lA~~~~p~~li~~l~~w~~~dsl~~p~~isp~yiWl~iF~~QPHKEERF 325 (568)
T KOG2515|consen 246 VLTGHGPNIYGTEPWYYYIINLFLNFNIVFLLAMLLGPFLLIYFLRVWPKWDSLALPVVISPMYIWLAIFFIQPHKEERF 325 (568)
T ss_pred eccCCCCCccccCchHHHHHhhhccccHHHHHHHHhchHHHHHHHhhhhhhhccCCceehhHHHHHHHHHhcCccchhhh
Confidence 999999999999999999999999999998887763322111 1222222 11224569999999999999999999
Q ss_pred hhchhhHHHHHHHHHhhhcccccccCCCCCcchhHhhhhhhhhHHHHHHHHHHHHHHHHHHHhccccchhhHHhccccCC
Q 009200 349 LYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDD 428 (540)
Q Consensus 349 L~Pi~Pll~l~aAi~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ls~~r~~~l~~~Y~apl~v~~~L~~~~~ 428 (540)
|||+||++|++||++++..++++.++.+... +......+.+++.+++.++++|+||++|+++||+||++||++++++++
T Consensus 326 LyPIYPlI~l~aaiald~~~~lf~~k~s~~~-~~~~~~~~~i~l~v~~~~~~ls~SR~~Al~nnY~aPl~vY~~l~~~~t 404 (568)
T KOG2515|consen 326 LYPIYPLICLSAAIALDAVLRLFLRKLSSRE-SHYVTLSKFIALLVLLIIACLSMSRIVALVNNYHAPLEVYPELSSLNT 404 (568)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHhhc
Confidence 9999999999999999999987765433211 122223456677888899999999999999999999999999988754
Q ss_pred CC---CCccceecccceecCCCcccC-CCCceeEeecCCCCCCCCcCCCCC---CCCCcCCCCCcccccccCCCccCCCC
Q 009200 429 AG---PGSVVCVGSEWHRYPSSFFIP-NYVGEVRWLDDGFRGLLPLPFNST---LGGTSAAPSYFNNENKASDQQFVILP 501 (540)
Q Consensus 429 ~~---~~~~vC~g~ewyrfPssffLp-~~~~~l~Fl~s~f~G~LP~~f~~~---~~~t~~~p~~~Nd~N~ee~~~yv~~~ 501 (540)
.+ +++|||+||||||||||||+| +| .||||+||||||+||++|+|+ .++|+.+|++|||+|+||++||+|++
T Consensus 405 ~~~~~~~~nVCvGkEWhRfPSSFflP~dn-~rlrFikSeFrGlLP~pF~es~s~~~~tr~iP~~mNn~Nqee~~rY~di~ 483 (568)
T KOG2515|consen 405 DGTKAPPVNVCVGKEWHRFPSSFFLPHDN-SRLRFIKSEFRGLLPGPFPESGSIFEGTRTIPPYMNNKNQEEESRYWDIE 483 (568)
T ss_pred CCCCCCceeeeeCcccccCCccccccccc-ceEEeeccccCccCCCCcccccccccceeeCCcccccccccCcceeeccc
Confidence 33 346999999999999999999 55 999999999999999999999 68999999999999999999999999
Q ss_pred CCcEEEeccCCc
Q 009200 502 LPAGLIEIYTAL 513 (540)
Q Consensus 502 ~Cdy~vd~~~~~ 513 (540)
+|||+||++.+.
T Consensus 484 ~CdyliD~~~~~ 495 (568)
T KOG2515|consen 484 RCDYLIDIVLDI 495 (568)
T ss_pred cccEEEEecccc
Confidence 999999965543
No 2
>PLN02816 mannosyltransferase
Probab=100.00 E-value=7.9e-80 Score=673.58 Aligned_cols=407 Identities=18% Similarity=0.222 Sum_probs=327.7
Q ss_pred HHHHHHHHHHHHHHhhhcC-CCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCC-ch
Q 009200 46 FVPVFALGMLRYMSATTNI-IHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAED-KV 123 (540)
Q Consensus 46 ~~~~~~ll~~Rl~~al~~~-i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~-~~ 123 (540)
..++.+++++|+++|++.+ ++||||+||+|||||+++||+|.|||||+| ++||++||++++++++++.. ++.+ +.
T Consensus 39 ~~~~~~~~~~R~~~al~~~t~f~pDE~fQslE~ah~~vfG~G~lTWEw~~--~lRS~~~Pll~a~~~~~~~~-l~~~~~~ 115 (546)
T PLN02816 39 RRIFLFCLAFRVVNALLIQTYFNPDEHWQSLEVAHRTIFGYGYMTWEWKR--GIRSYLHPMLFAFLYKLLQV-TGLDTPY 115 (546)
T ss_pred HHHHHHHHHHHHHHHHHccccCCCCchhhhHHHHHHHHhCCcccceecCC--CccchhHHHHHHHHHHHHHH-hcCCcHH
Confidence 4678888999999999888 999999999999999999999999999987 99999999999999776654 4655 44
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh-------
Q 009200 124 RVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL------- 196 (540)
Q Consensus 124 ~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~------- 196 (540)
.++++||++||++++++|+++|+++++.+|.+++.|+++++++||+++|+++||+|||+|+.++++|+++|+.
T Consensus 116 ~~~~~pRl~~al~sal~D~~l~kl~~~~~g~~~A~~~L~~sl~swf~~y~~sRTfSNslEt~Lt~lAL~~w~~~~~~~~~ 195 (546)
T PLN02816 116 IMIKAPRLMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTFSNCLETVLTIMGLYYWPCIRDSSID 195 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhCccchhHHHHHHHHHHHHHhhcccccccc
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred --hchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccchhhhhhh
Q 009200 197 --EKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR---RFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVV 271 (540)
Q Consensus 197 --~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~---~~~~~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~~lN~l~ 271 (540)
.+...+++++++++++ |||++++|+|+++..+++ +++.++..++.+|++++++++.+||+|||||++|++|+++
T Consensus 196 ~~~~~~~~L~la~la~~i-RPt~ailwl~l~l~~l~~~~~~~~~l~~~~l~~g~~~l~~s~~IDs~fyg~~~~p~~nfl~ 274 (546)
T PLN02816 196 YPVNRKWGLVIAALACAI-RPTSAVIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRLMYGSWVIVPLNFLK 274 (546)
T ss_pred ccchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHhhCCcccchhhhee
Confidence 1234567788888877 899999999999988874 3444455677778888888999999999999999999999
Q ss_pred hhhcCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHhhhhccCcchhHHHHHHHHH-HHHHhcCCCcccchhh
Q 009200 272 YNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIW-LLFMSMQPHKEERFLY 350 (540)
Q Consensus 272 yNv~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~~~~~~~~~~~~~~~~~~l~~~~~w-l~i~S~~pHKE~RFL~ 350 (540)
|||++|+ |++||+||||||++|++|+++.. .+.+.+.++...+..+ +.+..+| +++||++||||+|||+
T Consensus 275 FNv~~~~-ss~YGt~PWh~Yf~~glP~~l~~----~lpf~l~gl~~~~~~~-----l~~~~l~~i~i~S~l~HKE~RFI~ 344 (546)
T PLN02816 275 FNFLSSG-GDYYGTHPWHWYFTQGFLVMLFT----FTPFSIAGIIKSKNQK-----LSALILWVLAIYSILGHKEFRFVL 344 (546)
T ss_pred EeeccCc-ccccccCCcHHHHHHHHHHHHHH----HHHHHHHHHHHhcchh-----HHHHHHHHHHHHHcCCcchHHhHH
Confidence 9999998 88999999999999999997552 2222334443332221 2345566 9999999999999999
Q ss_pred chhhHHHHHHHHHhhhcccccccCCC-------CCcchhHhhhhhhhhH-HHHHHHHHHHHHHHHHHHhccccchhhHHh
Q 009200 351 PIYPLICVAASAVIESFPDIFRDKYD-------PNANFVMVTTAKVLRP-FVLGLILCASHSRTFSLVNGYAAPIEVYKI 422 (540)
Q Consensus 351 Pi~Pll~l~aAi~l~~l~~~~~~~~~-------~~~~~~~~~~~~~l~~-~~l~~~~~ls~~r~~~l~~~Y~apl~v~~~ 422 (540)
|++|++++.||++++.+........+ .+.++..+ ....++. +++++.+++.++-+++++|| +||++||+.
T Consensus 345 P~lPll~i~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~ll~~ni~~a~y~s~~Hq-~G~i~vm~~ 422 (546)
T PLN02816 345 PVLPIALIFSGYAFAQMEVSGSSSSSSVTKKKQVPRQNHTK-WSPKLRLSVYFLLATNIPMALYMSLFHQ-RGTEDAMNY 422 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccccccch-hhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 99999999999999987532111100 00000000 1111222 22345567788899999999 999999999
Q ss_pred ccccCCCCCC-----ccceecccceecCCCcccCCCCceeEeecCCCCCCCCcCCCCC
Q 009200 423 LQHHDDAGPG-----SVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNST 475 (540)
Q Consensus 423 L~~~~~~~~~-----~~vC~g~ewyrfPssffLp~~~~~l~Fl~s~f~G~LP~~f~~~ 475 (540)
|+++.+.++. ...||++|||+ |||+| ++|+|++||-+.. +++.||+
T Consensus 423 l~~~~~~~~~~sv~fLmpCHsTP~yS-----hlH~~-i~~~fL~C~P~~~-~~~~DEa 473 (546)
T PLN02816 423 LSDEAYKGRVKSILFLMPCHSTPYYS-----TLHRN-IPMQFLDCTPSAE-KGELDES 473 (546)
T ss_pred HHhhhhccCcceEEEEecccCCCCee-----eeccC-CCccccccCCCCC-CCCCChH
Confidence 9987533222 35699999999 99998 9999999998742 5566775
No 3
>PF03901 Glyco_transf_22: Alg9-like mannosyltransferase family; InterPro: IPR005599 Members of this family are glycosylphosphatidylinositol mannosyltransferase enzymes 2.4.1.- from EC [, ]. At least some members are localised in endoplasmic reticulum and involved in GPI anchor biosynthesis [, ]. In yeast the SMP3 (YOR149C) has been implemented in plasmid stability [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0006506 GPI anchor biosynthetic process, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=100.00 E-value=1.1e-74 Score=619.94 Aligned_cols=390 Identities=29% Similarity=0.474 Sum_probs=319.0
Q ss_pred HHHHHHHHHHHHhhhcCCC-CCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCchHHH
Q 009200 48 PVFALGMLRYMSATTNIIH-DCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVF 126 (540)
Q Consensus 48 ~~~~ll~~Rl~~al~~~i~-~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~~~~ 126 (540)
++.+++++|+.+|++++.. ||||+||++||+|++++|+|.+||||+|++++||+++|++++++++.+..+.+.++...+
T Consensus 2 ~~~~ll~~R~~~a~~~~~~f~pDE~fq~~E~ah~~~~g~g~~tWE~~~~~~iRS~~~p~i~~~~~~~~~~~~~~~~~~~~ 81 (418)
T PF03901_consen 2 LFLLLLAFRLLNALFPQTSFHPDEYFQSLEPAHRLVFGYGYLTWEWSPFPGIRSWLFPLIFAIPYKLLARLGLDSPWAVF 81 (418)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCcccccHHhhhhhhcCccchhhhhccCCCCCChHHHHHHHHHHHHHHHHhhccchhHH
Confidence 5678899999999999944 999999999999999999999999999999999999999999998888876666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh----------
Q 009200 127 YAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL---------- 196 (540)
Q Consensus 127 ~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~---------- 196 (540)
+++|+++|++|+.+|+++++.+++.+|.+++.++++++++||+++++++||+|||+||.+++++++++++
T Consensus 82 ~~~Rl~~~~~s~~~d~~~~~~~~~~~~~~~a~~~l~l~~~s~~~~~~~~Rtlsns~e~~l~~~al~~~~~~~~~~~~~~~ 161 (418)
T PF03901_consen 82 YAPRLVLALLSALSDYYLYRLVKRLFGSSVALWALLLSLFSWFMFYYSSRTLSNSFETILVLLALYLWLRSLSRSNSSSS 161 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhhHHHhhhHHHHhhcccCccHHHHHHHHHHHHHHHHhhccCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred -hchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH---H-HH----HHHHHHHHHHHHHHHHHHHHHhhhcCcccchhh
Q 009200 197 -EKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR---R-FK----QAFLAGAATSVTLLALSVFVDYQYYRRWTSSVL 267 (540)
Q Consensus 197 -~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~---~-~~----~~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~~l 267 (540)
+++.....+.+..+++.||+++++++|+++.++.+ + .. ..+..++.++++++++++.+||+||||+++||+
T Consensus 162 ~~~~~~~~~~l~~~~~~~Rpt~~~~~~pl~l~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~iDs~~yg~~~~~~~ 241 (418)
T PF03901_consen 162 SKRYLLAIGLLAGLAVFFRPTSALFWLPLGLYLLWRLIGRRWKSFLFLLILIGLLSALLVLAISILIDSYFYGKWVFPPW 241 (418)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchh
Confidence 23344444444444567999999999999988854 1 12 223345566667778899999999999999999
Q ss_pred hhhhhhhcCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHhhhhccCcchhHHHHHHHHHHHHHhcCCCcccc
Q 009200 268 NLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKYAPGLVVVVSPVYIWLLFMSMQPHKEER 347 (540)
Q Consensus 268 N~l~yNv~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~~~~~~~~~~~~~~~~~~l~~~~~wl~i~S~~pHKE~R 347 (540)
|+++||+++|+ |++||+||||||+++++|+++.+..+.++ .+.....+++...+...+..+.+.|++++|++||||+|
T Consensus 242 n~~~~Nv~~~~-s~~yG~~p~~~Y~~~~lp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~l~~~S~~~HKE~R 319 (418)
T PF03901_consen 242 NFFKFNVLEGN-SSFYGTHPWHWYFTQGLPNLLGPFLPFLL-FGLFILRSRKYKRRLSILLLPILFWLAVYSLLPHKEFR 319 (418)
T ss_pred hheeeeecCCc-hhhhhhcceEEEEeecchhHhHHHHHHHH-HHHHHHhhhhhhhHHHHHHHHHHHHHHHhcccCCccce
Confidence 99999999998 89999999999999999998765433221 12222211222223445677888899999999999999
Q ss_pred hhhchhhHHHHHHHHHhhhcccccccCCCCCcchhHhhhhhhhhHHHHHHHHHHHHHHHHHHHhccccch--hhHHhccc
Q 009200 348 FLYPIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPI--EVYKILQH 425 (540)
Q Consensus 348 FL~Pi~Pll~l~aAi~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ls~~r~~~l~~~Y~apl--~v~~~L~~ 425 (540)
||+|++|++++.||.+++.+.+ ++++. + +......+.+..++.++++++++|||++|. ++|+++++
T Consensus 320 Fi~P~~Pl~~l~aa~~~~~~~~---~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~h~~g~~~~~~~~~~l~~ 387 (418)
T PF03901_consen 320 FIYPLLPLLLLFAAIGLSRLRR---NSWKR------R---RRIVLLVLLIVFNLILSLYFGLIHQYGAPPALEVMNQLRN 387 (418)
T ss_pred ehHHHHHHHHHHHHHHHHHHhh---hhhHH------H---HHHHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHh
Confidence 9999999999999999998851 11110 0 111224456778889999999999966653 66888876
Q ss_pred cCC-----CCCCccceecccceecCCCcccC
Q 009200 426 HDD-----AGPGSVVCVGSEWHRYPSSFFIP 451 (540)
Q Consensus 426 ~~~-----~~~~~~vC~g~ewyrfPssffLp 451 (540)
..+ .+++.++|+++||||+|+++|||
T Consensus 388 ~~~~~~~~~~~~~~v~~~~~ch~~P~~~~lh 418 (418)
T PF03901_consen 388 EPQQNRDSFNSPSSVCFLMPCHSTPSYSFLH 418 (418)
T ss_pred ccccccccCCCCcEEEEeCCCCCCCCcccCC
Confidence 642 24567899999999999999998
No 4
>KOG1771 consensus GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.8e-67 Score=536.11 Aligned_cols=369 Identities=22% Similarity=0.319 Sum_probs=300.9
Q ss_pred HHHHHHHHHHHHhhhcC-CCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCchHHH
Q 009200 48 PVFALGMLRYMSATTNI-IHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVF 126 (540)
Q Consensus 48 ~~~~ll~~Rl~~al~~~-i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~~~~ 126 (540)
.+..++++|+.||++.+ +++|||+||++||||..+||||+.||||. .+||||+||++++.+++.+ .++|+|++..+
T Consensus 6 ~~lf~LafR~~na~lvqT~f~pDE~wQsLEvaH~~~F~YGylTWEW~--~giRSyl~Plifa~lYkll-~ll~lds~~~~ 82 (464)
T KOG1771|consen 6 FWLFILAFRVLNALLVQTFFQPDEFWQSLEVAHHFIFGYGYLTWEWT--SGIRSYLHPLIFAALYKLL-QLLGLDSYYLL 82 (464)
T ss_pred ehHHHHHHHHHHHHhhhhhcCchHHHHHHHHHHHhhhccceEEEehH--hhHHHHHHHHHHHHHHHHH-HHhccCceeEE
Confidence 34556899999999999 99999999999999999999999999995 5999999999999996655 56899987655
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh-h-------
Q 009200 127 -YAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL-E------- 197 (540)
Q Consensus 127 -~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~-~------- 197 (540)
++||. + ++|++++++.||.+.++.+||+.||+||.++.+|++||.+ +
T Consensus 83 i~aPr~--------------~----------~~w~lf~~l~s~fn~y~~trtl~nt~etvLT~ialyY~p~~g~~si~~~ 138 (464)
T KOG1771|consen 83 INAPRY--------------R----------AKWALFCSLVSWFNAYVGTRTLSNTLETVLTSIALYYFPWYGKYSISSS 138 (464)
T ss_pred EEcchh--------------h----------hHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhheeccccccccccch
Confidence 88991 1 7899999999999999999999999999999999999976 1
Q ss_pred chhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH--H-HHHH-HHHHHHHHHHHHHHHHHHHhhhcCcccchhhhhhhhh
Q 009200 198 KYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR--R-FKQA-FLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYN 273 (540)
Q Consensus 198 ~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~--~-~~~~-l~~~i~~~l~~l~~~v~iDs~fYg~~~~~~lN~l~yN 273 (540)
+..+....+++++++ ||+|+++|+|..+.++.+ + ..++ ....+..+.++++..+++|+++||++++++.|+++||
T Consensus 139 ~~~~~l~vaalac~i-RPta~lIW~~~l~~~l~~s~~~vldlI~~s~v~~gflvlg~g~liDr~~yg~~~f~~~~FlkFN 217 (464)
T KOG1771|consen 139 SSTKYLSVAALACFI-RPTAALIWLPPLLLHLVASPQPVLDLILFSFVLIGFLVLGLGILIDRIFYGQWVFPPFNFLKFN 217 (464)
T ss_pred hhHHHHHHHHHHHHh-cccceeEehhHHHHHHhcCCccchhHHhhHHHHHHHHHHhHHHHHHHHHhcceeecchhhEEEe
Confidence 234566778888866 899999999998887775 2 2333 3356777888999999999999999999999999999
Q ss_pred hcCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHH-HHHHhhhhc-cCcchhHHHHHHHHH-HHHHhcCCCcccchhh
Q 009200 274 VVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFV-GILPIARKK-YAPGLVVVVSPVYIW-LLFMSMQPHKEERFLY 350 (540)
Q Consensus 274 v~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~-~~~~~~~~~-~~~~~~~~l~~~~~w-l~i~S~~pHKE~RFL~ 350 (540)
|.+|. |++||+||||||++||+|- +++...| .+.|+...+ .++.+..++ ..+.| +++||++||||.||++
T Consensus 218 v~~~l-ssfYG~hPWHwYfsqglPv-----VLg~~~pffI~Gl~~~~~~rp~~l~ll-~tIl~~L~VySlL~HKEfRFv~ 290 (464)
T KOG1771|consen 218 VTQGL-SSFYGVHPWHWYFSQGLPV-----VLGTFLPFFIFGLLLPNKKRPSLLQLL-ATILLTLLVYSLLPHKEFRFVL 290 (464)
T ss_pred eecCc-ccccCCCceeeeeccccHH-----HHhccchHHHHHhhccccCCcchhhhH-HHHHHHHHHHHhcCccceeeee
Confidence 99997 7899999999999999864 4565444 355554322 223233333 34566 8999999999999999
Q ss_pred chhhHHHHHHHHHhhhcccccccCCCCCcchhHhhhhhhhhHHHHHHHHHHHHHHHHHHHhccccchhhHHhccccCCCC
Q 009200 351 PIYPLICVAASAVIESFPDIFRDKYDPNANFVMVTTAKVLRPFVLGLILCASHSRTFSLVNGYAAPIEVYKILQHHDDAG 430 (540)
Q Consensus 351 Pi~Pll~l~aAi~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ls~~r~~~l~~~Y~apl~v~~~L~~~~~~~ 430 (540)
|++|++++.|+.+++++. +|+++. +...+.+.+++.++-+++.+|| +|++|+|+.++++...+
T Consensus 291 PilPl~li~ag~afs~l~-----~Wk~~~-----------ral~~l~~~ni~iAlyls~fHQ-~Gs~evM~~lh~ea~~~ 353 (464)
T KOG1771|consen 291 PILPLLLIFAGYAFSSLK-----KWKRSA-----------RALALLIAINIFIALYLSRFHQ-RGTIEVMPLLHEEAEIE 353 (464)
T ss_pred chHHHHHHHHhHHHHhhh-----hhcchh-----------hhhHHHHHhhHHHHHHHHHHhh-cCccchhhhcchhhccc
Confidence 999999999999999774 355431 2244556678889999999999 99999999999887333
Q ss_pred CC--ccceecccceecCCCcccCCCCceeEeecCCCCCCCCcCCCCC
Q 009200 431 PG--SVVCVGSEWHRYPSSFFIPNYVGEVRWLDDGFRGLLPLPFNST 475 (540)
Q Consensus 431 ~~--~~vC~g~ewyrfPssffLp~~~~~l~Fl~s~f~G~LP~~f~~~ 475 (540)
+. .-+||+||||+ |+|+| ..|||++|+-+ .-+++=||+
T Consensus 354 silflmPCHsTPyyS-----hiH~~-~~m~fltC~P~-~~k~e~des 393 (464)
T KOG1771|consen 354 SILFLMPCHSTPYYS-----HIHRP-FPMRFLTCEPF-LEKKELDES 393 (464)
T ss_pred CeEEEEEccCCcccc-----hhcCc-chhhhccCCCc-cCccccchh
Confidence 32 34699999999 99999 99999999864 234454443
No 5
>KOG2516 consensus Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family) [Cell wall/membrane/envelope biogenesis; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-43 Score=361.31 Aligned_cols=301 Identities=22% Similarity=0.331 Sum_probs=250.8
Q ss_pred HhhhcCCCCCccccccHHHHHHHHhc-cCccccccc--CCCCCchhHHHHHHHHHHHHHHHh---hCCCchHHHHHHHHH
Q 009200 59 SATTNIIHDCDEVFNYWEPLHYLLYK-SGFQTWEYS--SEFALRSYLYILFHELVGRPASWL---FAEDKVRVFYAVRLF 132 (540)
Q Consensus 59 ~al~~~i~~~DE~fq~~Epah~lv~G-~G~~TWE~s--p~~~iRS~~~p~l~a~~~~~~~~~---lg~~~~~~~~~~Rl~ 132 (540)
.-...++++.+|.||.+..++.+.|- ....-+|+. |+...|++++|...|++..|...+ +..+|.++++++|.+
T Consensus 12 hli~~PfTKVEESFnlQA~HDil~~~~~~~sqYDHleFPGVVpRTFigplviAvlSsP~~yi~s~~~~~k~~~qlvvR~~ 91 (517)
T KOG2516|consen 12 HLIKAPFTKVEESFNLQAIHDILTYRWDDLSQYDHLEFPGVVPRTFIGPLVIAVLSSPYVYIFSLLVIPKFWVQLVVRGT 91 (517)
T ss_pred eeeecCcchHhhhhhHHHHHHHHHhccchhhhcccccCCCcCccccccceeeeeccccHHHHHHHHhccHHHHHHHHHHH
Confidence 33456799999999999877777666 455566666 999999999999999887665543 567899999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHH
Q 009200 133 LGLLSVTTDAV-LVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVI 211 (540)
Q Consensus 133 lallsa~~d~~-~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i 211 (540)
+|++++.+-.+ +-+.+.|.+|..++.|+.++++.|+|..+++||+|||.|+..+++.|+++|+++++..++.+.+++++
T Consensus 92 lGl~~~~s~~~~l~~~v~k~fg~~~~~~f~l~~~~qFHlmFYmtRpLpNifaLplv~~al~~~L~~~y~~~I~~s~~a~i 171 (517)
T KOG2516|consen 92 LGLLNAISFLYKLQCSVSKIFGTEVGTWFILFTCTQFHLMFYMTRPLPNIFALPLVNHALALLLRGRYYGAISLSAFAAI 171 (517)
T ss_pred HHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhHheeeeecCCCchHHHHHHHHHHHHHHHhccchhhhHHHHHHHH
Confidence 99999988777 99999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred -hhhhhHHHhHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccchhhhhhhhhhcCCCCCcccccc
Q 009200 212 -LGWPFSILAFLPVVFY-SLAR---RFKQAFLAGAATSVTLLALSVFVDYQYYRRWTSSVLNLVVYNVVGGGESHLYGIE 286 (540)
Q Consensus 212 -~~~P~a~~l~~Pl~l~-~l~~---~~~~~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~~lN~l~yNv~~~~gs~~yGt~ 286 (540)
+|.+.+++++ ++.+. .+.| ...+++..|+.++++++++++.|||+|||+|.||+.+.+.||++.|+ |+.|||+
T Consensus 172 vfR~El~lllg-~i~L~~~l~~RkVsl~~al~vgi~~~~~~la~si~VDSYFW~~~~wPEgev~~fNvV~nk-Ss~wGts 249 (517)
T KOG2516|consen 172 VFRSELALLLG-CILLPLLLQRRKVSLDGALKVGIPAGLLCLAASILVDSYFWGRWCWPEGEVFLFNVVENK-SSNWGTS 249 (517)
T ss_pred HHHHHHHHHHH-HHHHHHHHhcceeehHhHHHhccchhhhhheeeeeehhhhhccccCcCcceEEEEeeccc-ccccCCC
Confidence 4667776665 23333 3333 24467778999999999999999999999999999999999999999 8899999
Q ss_pred chhHHHHHhhhhhhHHHHHHHHHHHHHHhh-hhccCcchhHHHHHHHHHHHHHhcCCCcccchhhchhhHHHHHHHHHhh
Q 009200 287 GPLYYLRNAFNNFNFGFVLALLFVGILPIA-RKKYAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPIYPLICVAASAVIE 365 (540)
Q Consensus 287 Pw~~Y~~~~l~n~~i~~~lall~~~~~~~~-~~~~~~~~~~~l~~~~~wl~i~S~~pHKE~RFL~Pi~Pll~l~aAi~l~ 365 (540)
|..|||...+|... ...++ +..+++. .++.. .+..+.++++++||++||||.|||+.+.|.+++.||.|++
T Consensus 250 PflwYFysaLpr~~---~ttlL-lvpig~~~~~~~~----~~vl~sL~fi~lySflpHKElRFIIY~~P~~nl~aA~gca 321 (517)
T KOG2516|consen 250 PFLWYFYSALPRLF---LTTLL-LVPIGLVLIPRLR----PLVLVSLFFIFLYSFLPHKELRFIIYAFPWFNLAAAIGCA 321 (517)
T ss_pred ccHHHHHHHHHHHH---HHHHH-HHhhhhhcccCcc----ceeHHHHHHHHHHHhCCcceeEEEEeehHHHHHHHHHHHH
Confidence 99999999998742 22332 2233332 22222 3445667889999999999999999999999999999999
Q ss_pred hccc
Q 009200 366 SFPD 369 (540)
Q Consensus 366 ~l~~ 369 (540)
++.+
T Consensus 322 ~l~~ 325 (517)
T KOG2516|consen 322 RLWN 325 (517)
T ss_pred HHHH
Confidence 9864
No 6
>KOG4123 consensus Putative alpha 1,2 mannosyltransferase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-33 Score=284.58 Aligned_cols=304 Identities=18% Similarity=0.179 Sum_probs=219.8
Q ss_pred hHHHHHHHHHHHHHHhhhcC--CCCCccccccHHHHHHHHhc-cCcccccccCCCCCchhHHHHHHHHHHHHHHHh---h
Q 009200 45 WFVPVFALGMLRYMSATTNI--IHDCDEVFNYWEPLHYLLYK-SGFQTWEYSSEFALRSYLYILFHELVGRPASWL---F 118 (540)
Q Consensus 45 ~~~~~~~ll~~Rl~~al~~~--i~~~DE~fq~~Epah~lv~G-~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~---l 118 (540)
.+.++..++++|+.-.+..+ |.||||+||+.|++....+| .|..|||+.+..++||+...++..++....... .
T Consensus 7 ~r~~y~~ll~lrill~f~pg~sYiHPDEhfQs~Eima~d~fgvk~trpWEF~~k~p~Rsv~Plll~~~P~F~llr~~ce~ 86 (550)
T KOG4123|consen 7 MRIIYTFLLILRILLMFCPGPSYIHPDEHFQSFEIMAMDFFGVKGTRPWEFKSKFPARSVGPLLLMLGPIFLLLRCFCEI 86 (550)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccChhhhhhhHHHHHHHHhccceecceeecCCCccceehhHHHHhccHHHHHHHHHHh
Confidence 34577788999988777776 99999999999999999999 589999999999999887555555543222221 2
Q ss_pred C-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHH-HHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh
Q 009200 119 A-EDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASY-TLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL 196 (540)
Q Consensus 119 g-~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~-~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~ 196 (540)
+ .+.+.....+|+...++|...|..+++.++ ..| .++| .+++...||..+.+.|||++||+||.+..+.+-..-+
T Consensus 87 ~~~g~yallvfprl~ytlisl~~d~~i~~i~r-l~g--a~rw~allllssSyvtltfqThTFSNSIEtl~f~wtL~lvs~ 163 (550)
T KOG4123|consen 87 NDCGAYALLVFPRLNYTLISLCIDFLIPKIIR-LEG--AARWMALLLLSSSYVTLTFQTHTFSNSIETLAFFWTLLLVSD 163 (550)
T ss_pred ccCCceeeeehhHHHHHHHHHHHhhhhhhhcC-hhh--HHHHHHHHHHhcCceeEEEeeeecccHHHHHHHHHHHHHHHH
Confidence 4 234555678999999999999999999986 444 4555 4566678999999999999999999988876654422
Q ss_pred ---------hchhHHH--HHHHHHHHhhhhhHHHhHHHHHHHHHHH-------HHHHHHH---HHHHHHHHHHHHHHHHH
Q 009200 197 ---------EKYAMAV--AVSAAGVILGWPFSILAFLPVVFYSLAR-------RFKQAFL---AGAATSVTLLALSVFVD 255 (540)
Q Consensus 197 ---------~~~~~ai--~~~ala~i~~~P~a~~l~~Pl~l~~l~~-------~~~~~l~---~~i~~~l~~l~~~v~iD 255 (540)
.++.++. ..+.+++++.|||-++++++.++.+..| ++|++.+ ....++..++++.++.|
T Consensus 164 ~v~~~~~~~s~r~rswlLg~I~vaGvFnRpTFlaF~~~p~~~w~~Rg~~~~~~~~Kdf~l~ll~f~~~a~~t~~lfil~D 243 (550)
T KOG4123|consen 164 LVNEKLIKKSNRKRSWLLGIIFVAGVFNRPTFLAFIFAPCIIWFVRGFKKHVNNPKDFFLHLLIFSSVAFATSCLFILED 243 (550)
T ss_pred HhcccccCcchHHHHHHhhhheeeeecccchHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHhhhHHHHhhHhheec
Confidence 1122222 2233455688999988887777766665 2665432 23345566788899999
Q ss_pred hhhcC--c-ccchhhhhhhhhhcCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHHH-HHHhhhhccCcchhHHHHHH
Q 009200 256 YQYYR--R-WTSSVLNLVVYNVVGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVG-ILPIARKKYAPGLVVVVSPV 331 (540)
Q Consensus 256 s~fYg--~-~~~~~lN~l~yNv~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~~-~~~~~~~~~~~~~~~~l~~~ 331 (540)
|.||| + +|++|||++|||....+ -+.+|+||.+-++ +.|++.. .+..+.+ +-.... .+ .++..+
T Consensus 244 s~yy~~~~nfViTpwNnLkyNln~qn-la~HGlHprytHl---~vNmplL--fgp~l~a~~q~~~~--~r----kl~t~a 311 (550)
T KOG4123|consen 244 SKYYGNGKNFVITPWNNLKYNLNIQN-LAQHGLHPRYTHL---FVNMPLL--FGPLLFAAIQKGWD--LR----KLATWA 311 (550)
T ss_pred hhhhcCCCcEEEeehhhhhhcCCHHH-HHhcCcchhHHHH---HhcchHH--hhHHHHHHHHHHhh--hh----hhhhHH
Confidence 99999 5 99999999999998877 7899999998764 5555543 3322221 111111 01 111222
Q ss_pred -HHHHHHHhcCCCcccchhhchhhHHHHHHHHH
Q 009200 332 -YIWLLFMSMQPHKEERFLYPIYPLICVAASAV 363 (540)
Q Consensus 332 -~~wl~i~S~~pHKE~RFL~Pi~Pll~l~aAi~ 363 (540)
+.-+++.|+.+|||.||+.|+.|++++..+-.
T Consensus 312 if~plffLSlf~HQEpRFLlPl~~pliln~~p~ 344 (550)
T KOG4123|consen 312 IFLPLFFLSLFPHQEPRFLLPLAPPLILNLGPT 344 (550)
T ss_pred HHHHHHHHHhccccCcchhhcchhHHHhhcCCc
Confidence 22378999999999999999999999888753
No 7
>TIGR03663 conserved hypothetical protein TIGR03663. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with Pfam family pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.
Probab=99.19 E-value=9.5e-08 Score=103.81 Aligned_cols=304 Identities=14% Similarity=0.115 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCchHHHH
Q 009200 48 PVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFY 127 (540)
Q Consensus 48 ~~~~ll~~Rl~~al~~~i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~~~~~ 127 (540)
+....++.|+.+-= .+..|.||...-+-..+.+..| .|.|.|.+. .|+++...+ ....++|.+. .
T Consensus 7 i~l~al~lRl~~Lg-~~~~~~DEa~ya~~a~~ml~~g----~~~~~p~~h-----~Pll~wl~A-~~~~lFG~se----~ 71 (439)
T TIGR03663 7 IVLFALLLRLFELG-LRVFHHDEAIHASFILKLLETG----VYSYDPAYH-----GPFLYHITA-AVFHLFGISD----A 71 (439)
T ss_pred HHHHHHHHHHHhcC-CCCCCCCchhHHHHHHHHHhcC----CCCcCCCCC-----CCHHHHHHH-HHHHHhCCCH----H
Confidence 34455667887743 3457999988554444444444 344544322 255544432 2334567653 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh---h-ch---h
Q 009200 128 AVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL---E-KY---A 200 (540)
Q Consensus 128 ~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~---~-~~---~ 200 (540)
..|+..++++.. -..++...++.+|++.+....++.++++.+.+.+--..++...+.+.++++..+++ + +. .
T Consensus 72 a~RL~~aL~g~~-v~l~~~~~r~~~~~~~al~AAllla~sp~~~~~sr~~~~D~~l~~f~~lal~~l~r~~~~~~~~~~~ 150 (439)
T TIGR03663 72 TARLLPAVFGVL-LPLTAWLYRKRLGDNEVLWAAVLLAFSPVMVYYSRFMRNDIFVAFFTLLAVGAAFRYLDTGKRRYLF 150 (439)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHcCcHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 699999998854 45677777888999999888888899998877776667787777777777776654 2 21 2
Q ss_pred HHHHHHHHHHHhhhhhHHHhHHH---HHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHhhhcCcc
Q 009200 201 MAVAVSAAGVILGWPFSILAFLP---VVFYSLARR---------------FKQAFLAGAATSVTLLALSVFVDYQYYRRW 262 (540)
Q Consensus 201 ~ai~~~ala~i~~~P~a~~l~~P---l~l~~l~~~---------------~~~~l~~~i~~~l~~l~~~v~iDs~fYg~~ 262 (540)
.+...+++++..-.+...+..++ +++...+++ +.+.....+.++++.+++....=..++...
T Consensus 151 lag~~~gLa~ltKg~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~w~~~~~~~~~~~~~i~~~~y~~~~~~p 230 (439)
T TIGR03663 151 LAASALALAFTSKENAYLIILIFGGLLAIYLDWKKERAGARETLTRKRSLFWRWLRDLIGSVAVFAAIIMFFYTSLFRHP 230 (439)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 34445566655533323222121 233333311 111111111112222222111101111111
Q ss_pred cchhhhhhhh---hh---cCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHhhhhcc----Ccch-hHHHHHH
Q 009200 263 TSSVLNLVVY---NV---VGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFVGILPIARKKY----APGL-VVVVSPV 331 (540)
Q Consensus 263 ~~~~lN~l~y---Nv---~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~~~~~~~~~~~----~~~~-~~~l~~~ 331 (540)
. .-.++..- +- ....+....+.+||+||+...+.-.. + .+.+...++....++++ ..+. ...+.-.
T Consensus 231 ~-~~~~i~~~~~~~~~~~w~~~~~~~~~~~P~~yy~~~ll~~~~-P-~~~~~~~~l~~~~~~r~~~~~~~~~~~f~~~W~ 307 (439)
T TIGR03663 231 E-RLFSIVEAGTIKAVEHWASMHRIARIYGPFYYYLPILLLYEL-P-ALIFAAAGVLGFLANRYATDKRRSFFLFACYWT 307 (439)
T ss_pred H-HHHHHHHhhhhhHHHHHhhccccCCCCCChHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 1 11111100 00 00111223345699999876653221 1 11111123333333221 1111 1122233
Q ss_pred HHHHHHHhcCCCcccchhhchhhHHHHHHHHHhhhcccc
Q 009200 332 YIWLLFMSMQPHKEERFLYPIYPLICVAASAVIESFPDI 370 (540)
Q Consensus 332 ~~wl~i~S~~pHKE~RFL~Pi~Pll~l~aAi~l~~l~~~ 370 (540)
++-+++||..+.|=...+.|++|.+.+.+|.++..+.+.
T Consensus 308 ~~~~v~ys~~~~K~Pwy~l~~~~PlAll~g~~l~~~~~~ 346 (439)
T TIGR03663 308 LASLLFYSYIQEKVPWLVVHILVPLAILAAVGLSAVVLT 346 (439)
T ss_pred HHHHHHHhhcccCCcchhHHHHHhHHHHHHHHHHHHHHh
Confidence 444788999999999999999999999999999987654
No 8
>PRK13279 arnT 4-amino-4-deoxy-L-arabinose transferase; Provisional
Probab=99.11 E-value=1.1e-07 Score=105.80 Aligned_cols=293 Identities=14% Similarity=0.173 Sum_probs=149.9
Q ss_pred HHhhhcC-CCCCccccccHHHHHHHHhccCcccccccCC-CCCchhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 009200 58 MSATTNI-IHDCDEVFNYWEPLHYLLYKSGFQTWEYSSE-FALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGL 135 (540)
Q Consensus 58 ~~al~~~-i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~-~~iRS~~~p~l~a~~~~~~~~~lg~~~~~~~~~~Rl~lal 135 (540)
+..+..+ ..++||. +|.|++..++.+.. | ..|. .+.+-+-.|-+++++.....+++|.+. ...|+..++
T Consensus 20 ll~L~~r~lw~~DE~-ryA~iareMl~sGd---W-lvP~~~g~~y~eKPPL~yWl~Als~~LFG~~~----~a~RLpsaL 90 (552)
T PRK13279 20 LLPLNTRLLWQPDET-RYAEISREMLASGD---W-IVPHFLGLRYFEKPIAGYWINSIGQWLFGDNN----FGVRFGSVF 90 (552)
T ss_pred HHHhcCCCCCCCchH-HHHHHHHHHHHhCC---c-CccccCCCcCCCCCcHHHHHHHHHHHHcCCCc----HHHHHHHHH
Confidence 3335555 7899997 58898877664321 1 0111 122222233344455455556778543 468999999
Q ss_pred HHHHHHHHHHHHHHHhhC-chhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHH-HH--Hhhh---c-h----hHHH
Q 009200 136 LSVTTDAVLVVALSRKYG-RRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLAS-GF--FLLE---K-Y----AMAV 203 (540)
Q Consensus 136 lsa~~d~~~~~~~~~~~g-~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al-~~--~l~~---~-~----~~ai 203 (540)
.+.++-..+|..+++.++ .+.+.+..++.+++.+....+.-...+..-+.+.++++ ++ ..++ + . ...+
T Consensus 91 ~~~lt~llvy~larrl~~~r~~AllAaLIlls~~~v~~~g~~a~~D~~l~~fi~lal~~f~~~~~~~~~~~~~~~~lllG 170 (552)
T PRK13279 91 STLLSALLVYWLALRLWRDRRTALLAALIYLSLFLVYGIGTYAVLDPMITLWLTAAMCSFWLALQAQTRRGKIGGYLLLG 170 (552)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHH
Confidence 888888999999998875 46777777777776655443332222333223333332 22 2221 1 1 1222
Q ss_pred HHHHHHHHhhhhhHHHh-HHHHHHHHHHH-HHHHHHHH---HHHHHHHHHHH-HHHHHhh---hcCcccchhhhhhhhhh
Q 009200 204 AVSAAGVILGWPFSILA-FLPVVFYSLAR-RFKQAFLA---GAATSVTLLAL-SVFVDYQ---YYRRWTSSVLNLVVYNV 274 (540)
Q Consensus 204 ~~~ala~i~~~P~a~~l-~~Pl~l~~l~~-~~~~~l~~---~i~~~l~~l~~-~v~iDs~---fYg~~~~~~lN~l~yNv 274 (540)
+.+++|++.--|.+.++ ++.++.+.+.+ ++++.... ++.+++++.++ .+++... |+..+.+ .-|+-+|
T Consensus 171 la~Glg~LTKG~ial~lP~l~il~~ll~~rr~~~ll~~~~l~llvalli~lPW~lai~~~~pdf~~~ff~-~e~i~Rf-- 247 (552)
T PRK13279 171 LACGMGFMTKGFLALAVPVISVLPWVIWQKRWKELLIYGPLAVLSAVLVSLPWALAIAQREPDFWHYFFW-VEHIQRF-- 247 (552)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH-HHHHHHH--
Confidence 34455665533433322 12122233333 45443322 22222222111 2222111 0111111 1133332
Q ss_pred cCCCCCccccccchhHHHHHhhhhhhHHHHHHHHHH-HHHHhhhhc-cCcchhHHHHHHHHHHHHHhcCCCcccchhhch
Q 009200 275 VGGGESHLYGIEGPLYYLRNAFNNFNFGFVLALLFV-GILPIARKK-YAPGLVVVVSPVYIWLLFMSMQPHKEERFLYPI 352 (540)
Q Consensus 275 ~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~~lall~~-~~~~~~~~~-~~~~~~~~l~~~~~wl~i~S~~pHKE~RFL~Pi 352 (540)
.+ ++....+|++||+.+.+..+--+ . .++| ++...++++ .++....++.-+.+.++++|+.+.|.++++.|+
T Consensus 248 -~~--~~~~h~~p~~yYl~~ll~~~lPW--~-~llp~al~~~w~~r~~~~~~~fll~W~~~~llfFSis~~Kl~~YiLP~ 321 (552)
T PRK13279 248 -AE--DDAQHKAPFWYYLPVLIAGSLPW--L-GLLPGALKQGWRERKKHPGTFYLLLWVVMPLLFFSIAKGKLPTYILPC 321 (552)
T ss_pred -hc--ccccCCCCceehHHHHHHHHHHH--H-HHHHHHHHHHHHhhccCcHHHHHHHHHHHHHheeeeeCCCcchhHHHH
Confidence 12 22334579999988765432111 1 1222 233333332 233222223334445788999999999999999
Q ss_pred hhHHHHHHHHHhhhcc
Q 009200 353 YPLICVAASAVIESFP 368 (540)
Q Consensus 353 ~Pll~l~aAi~l~~l~ 368 (540)
+|.+.+.+|..+.+..
T Consensus 322 ~pplAlL~A~~l~~~~ 337 (552)
T PRK13279 322 FAPLAILMAHYAVDCA 337 (552)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999998887664
No 9
>COG1807 ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]
Probab=97.97 E-value=0.027 Score=62.82 Aligned_cols=149 Identities=19% Similarity=0.120 Sum_probs=95.4
Q ss_pred CCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHH
Q 009200 65 IHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVL 144 (540)
Q Consensus 65 i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~ 144 (540)
..|.||.......-....-|.....+.+ +...+=.|=+.+++......++|.+. ...|+..++.+..+-..+
T Consensus 30 ~~~~de~~~~~~~~~m~~s~~w~~~~~~----g~~~~~kPPl~~Wl~a~~~~lfG~~~----~~~rl~~~l~~~~~~~l~ 101 (535)
T COG1807 30 LWDPDEARYAEIAREMLESGDWFTPQLL----GLPYFEKPPLVYWLQALSYLLFGVNE----WSARLPSALAGALTALLV 101 (535)
T ss_pred CCCCCchhHHHHHHHHHHcCCCcceeeC----CccccCCCcHHHHHHHHHHHHcCcch----HHHHHHHHHHHHHHHHHH
Confidence 5679999854433334334443333333 22222222234444455556677332 458888888888888889
Q ss_pred HHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh---h--ch---hHHHHHHHHHHHhhhhh
Q 009200 145 VVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL---E--KY---AMAVAVSAAGVILGWPF 216 (540)
Q Consensus 145 ~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~---~--~~---~~ai~~~ala~i~~~P~ 216 (540)
|..+++.+|.+.+....++.++.+.....+.+-.+++.-+.++++++..+.+ + +. .......++|....-|.
T Consensus 102 y~l~k~l~~~~~a~~aali~~~~p~~~~~~~~~~~D~~l~~f~~la~~~~~~~~~~~~~~~~~l~~gl~lGL~~ltKg~~ 181 (535)
T COG1807 102 YWLAKRLFGRLAALLAALILLLTPLFFLIGRLALLDAALAFFLTLALALLYLALRARGKLKWLLLLGLALGLGFLTKGPG 181 (535)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHhchH
Confidence 9999988888788888888888888888888888888877777777765543 2 22 22334456666665565
Q ss_pred HHHhH
Q 009200 217 SILAF 221 (540)
Q Consensus 217 a~~l~ 221 (540)
+.++.
T Consensus 182 ~~~l~ 186 (535)
T COG1807 182 ALLLP 186 (535)
T ss_pred HHHHH
Confidence 55555
No 10
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=97.55 E-value=0.049 Score=59.67 Aligned_cols=102 Identities=19% Similarity=0.122 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-CchhHHHHHHHHHhhhhhhhh-ccccCcchHHHHHHHHHHHHHhhhchhHHHHHH
Q 009200 129 VRLFLGLLSVTTDAVLVVALSRKY-GRRLASYTLAMLCLTSGCFFA-STSFLPSSFSMYAISLASGFFLLEKYAMAVAVS 206 (540)
Q Consensus 129 ~Rl~lallsa~~d~~~~~~~~~~~-g~~~a~~~l~l~~~s~~~~~~-strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ 206 (540)
.=++|+++-+.+-.-+|+.+++.. +.+.+....+..+.+|+.... .--+.++++++.+..+++.++.++|....+.++
T Consensus 62 Lli~Qal~la~~~~pl~~lar~~~~~~~~a~~~~~~ylL~p~~~~~~~~dFH~~~~avPll~~~~~~~~~~r~~~~~~~~ 141 (449)
T PF09852_consen 62 LLIVQALLLALGAIPLYRLARRRLLSRRLALLIALAYLLSPGLQGANLFDFHPVAFAVPLLLWALYALERRRWRLFILWA 141 (449)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhHHHHhhhhCCCcHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 346788888888999999999887 667777777788888887764 346799999998888888877777777777766
Q ss_pred HHHHHhhhhhHHHhHHHHHHHHHHH
Q 009200 207 AAGVILGWPFSILAFLPVVFYSLAR 231 (540)
Q Consensus 207 ala~i~~~P~a~~l~~Pl~l~~l~~ 231 (540)
++...+ ++..++.++-++++.+++
T Consensus 142 ll~llv-KEd~~l~v~~~gl~~~~~ 165 (449)
T PF09852_consen 142 LLLLLV-KEDLGLTVAGIGLYLLLR 165 (449)
T ss_pred HHHHHH-HhhHHHHHHHHHHHHHHh
Confidence 666554 666666666688888776
No 11
>PF13231 PMT_2: Dolichyl-phosphate-mannose-protein mannosyltransferase
Probab=97.39 E-value=0.013 Score=53.42 Aligned_cols=115 Identities=24% Similarity=0.255 Sum_probs=81.4
Q ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHH
Q 009200 112 RPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLAS 191 (540)
Q Consensus 112 ~~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al 191 (540)
.....++|.+ ....|+...+.+..+-..+|+..++.+|++.+....++..+++.....+....+++..+.+..+++
T Consensus 11 ~~~~~l~G~~----~~~~~~~~~l~~~~~~~~~y~i~r~~~~~~~a~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 86 (159)
T PF13231_consen 11 ALFFKLFGDS----VWALRLFNILFSLLTLLLIYLIARRLFGRRAALIAALLLALSPMFIFYSASARPDMLLLFFFLLAL 86 (159)
T ss_pred HHHHHHhCcC----HHHHHHHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 3344455642 246799999999999999999999999988888888888888877777777888999888888888
Q ss_pred HHHhh---hch----hHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH
Q 009200 192 GFFLL---EKY----AMAVAVSAAGVILGWPFSILAFLPVVFYSLAR 231 (540)
Q Consensus 192 ~~~l~---~~~----~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~ 231 (540)
+...+ ++. .....+.+++... ++..+.+..++.++.+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~-k~~~~~~~~~~~~~l~~~ 132 (159)
T PF13231_consen 87 YAFYRYIKSKKWRWWILAGLLLGLAFLT-KYTFLLLIPALLLYLLLS 132 (159)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 77764 222 2233444555544 566666665566554444
No 12
>TIGR03766 conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.
Probab=97.34 E-value=0.13 Score=57.09 Aligned_cols=169 Identities=15% Similarity=0.055 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHhhhcC---CCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCch
Q 009200 47 VPVFALGMLRYMSATTNI---IHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKV 123 (540)
Q Consensus 47 ~~~~~ll~~Rl~~al~~~---i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~ 123 (540)
.++.+.++.|+.-.+..+ ..|+--++|.-. . |. .++++ +|--|-. +=..+....+.+.+++|.+..
T Consensus 70 ~l~~~~~i~ql~~i~~~~~~p~~D~~~v~~~A~---~-----~~-~~~~~-~Y~~~yP-nn~g~~l~~~~l~kifg~~~~ 138 (483)
T TIGR03766 70 VIFILLLILQLILVTALHPLIGWDAGAVHTAAT---K-----SN-ESSIS-NYFSRNP-NNLFLLLFMHFLYKLFGETSW 138 (483)
T ss_pred HHHHHHHHHHHHHHHHcCCCcCcCHHHHHHHHh---c-----CC-CcccC-ceeeECC-chHHHHHHHHHHHHHhCccHH
Confidence 345556677887777654 566655444433 1 11 11121 2222210 011111222334456675433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHh--hh-c--
Q 009200 124 RVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFL--LE-K-- 198 (540)
Q Consensus 124 ~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l--~~-~-- 198 (540)
...+++..+++..+-...|+.+++.+|++.+++++++.+..+....+..=..+++..+.+.++++..+. .+ +
T Consensus 139 ---~~~~llNil~~~~si~liy~i~k~lf~~~~a~~a~~l~~l~~~~~~y~~~~Ysd~~~l~~~~l~l~~~~~~~~~~~~ 215 (483)
T TIGR03766 139 ---LFFDVVNIVLVDLSALILYKAVKKVFNKKKAFVALYLFVLLLALSPYILIPYTDTWVLPFVSLFLFLYTVISKKTDL 215 (483)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhcccH
Confidence 335888888888889999999999999999999888877777655555556677777777776654332 11 1
Q ss_pred ---h---hHHHHHHHHHHHhhhhhHHHhHHHHHHHHHH
Q 009200 199 ---Y---AMAVAVSAAGVILGWPFSILAFLPVVFYSLA 230 (540)
Q Consensus 199 ---~---~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~ 230 (540)
. ..++.++++|..+ ||.++++.+.+.++.+.
T Consensus 216 ~~~~~~~Il~gillal~~~i-Kp~~iI~liA~~i~~~l 252 (483)
T TIGR03766 216 RKKIALSILLGVLLAIAYFI-KPSAIIFVIAIFIVLFL 252 (483)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cccchHHHHHHHHHHHH
Confidence 1 2234455666655 89988877666666554
No 13
>PF09913 DUF2142: Predicted membrane protein (DUF2142); InterPro: IPR018674 This family of conserved hypothetical proteins has no known function.
Probab=96.99 E-value=0.13 Score=54.98 Aligned_cols=77 Identities=18% Similarity=0.176 Sum_probs=59.0
Q ss_pred HHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHH
Q 009200 114 ASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGF 193 (540)
Q Consensus 114 ~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~ 193 (540)
+.++++.+....+++.|+...++.+..-+...|..+ .+++.+++.+..|-..+-++..-+++++..+..+.+++
T Consensus 109 ig~ll~l~~~~~~~l~Rl~nll~~~~l~~~Ai~~~p------~~k~l~~~i~l~Pm~~~~~aS~s~D~~~~~~~~l~~a~ 182 (389)
T PF09913_consen 109 IGRLLGLSVLVMYYLGRLFNLLLYALLVYLAIKLAP------RGKWLLALIALLPMTLFQAASVSYDGLIIALAFLFIAL 182 (389)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc------hhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 455678888888899999999999887777776653 24455666677777677777788899998888888887
Q ss_pred Hhh
Q 009200 194 FLL 196 (540)
Q Consensus 194 ~l~ 196 (540)
+++
T Consensus 183 ~l~ 185 (389)
T PF09913_consen 183 LLR 185 (389)
T ss_pred HHH
Confidence 776
No 14
>PF04188 Mannosyl_trans2: Mannosyltransferase (PIG-V)); InterPro: IPR007315 This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI [], [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=96.26 E-value=0.19 Score=55.12 Aligned_cols=162 Identities=14% Similarity=0.175 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHhhC-chhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhh
Q 009200 137 SVTTDAVLVVALSRKYG-RRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWP 215 (540)
Q Consensus 137 sa~~d~~~~~~~~~~~g-~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P 215 (540)
..++-..+|+..++.++ .+.+..+.++.++++.-.+. +...+||+-+.++..++....+++...+..+.++++.. |.
T Consensus 123 ~~la~~~L~~l~~~~~~~~~~a~~a~ll~~~~PasiF~-sa~YsEslf~~lsf~gl~~~~~~~~~~a~~~~~la~~~-Rs 200 (443)
T PF04188_consen 123 FLLAAVALYRLTRRVFKSRKLALLAALLFIFSPASIFL-SAPYSESLFALLSFAGLYLLERGRWWLAGLLFALATLT-RS 200 (443)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHccHHHHh-hcCccHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-Hh
Confidence 34556788888877664 45777777777777765444 45688999989999898888888888888888888765 67
Q ss_pred hHHHhHHHHHHHHHHH---------HHH---HHHHHHHHHHHHHHHHHHHHHhhhcCcccch-------hhh----hhhh
Q 009200 216 FSILAFLPVVFYSLAR---------RFK---QAFLAGAATSVTLLALSVFVDYQYYRRWTSS-------VLN----LVVY 272 (540)
Q Consensus 216 ~a~~l~~Pl~l~~l~~---------~~~---~~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~-------~lN----~l~y 272 (540)
.+++.+.++....+.. +.+ +.+...++.++++.+..+....+-|.++-.. ||- -..|
T Consensus 201 nGll~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~~i~~pf~~~q~~~y~~fC~~~~~~~~~~WC~~~~P~~Y 280 (443)
T PF04188_consen 201 NGLLLAGFFAYELLGIYYLDLRQLRRQRRLVRALISAILSGLLIFLPFVLFQYYAYYRFCPPRSFGDEPPWCNNTIPSIY 280 (443)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhhcCCCCCCCCCchhhhccCccch
Confidence 7777666554433221 011 1122334445556666777777777553222 221 1246
Q ss_pred hhcCCCCCccccccchhHHHHHhhhhhhHHH
Q 009200 273 NVVGGGESHLYGIEGPLYYLRNAFNNFNFGF 303 (540)
Q Consensus 273 Nv~~~~gs~~yGt~Pw~~Y~~~~l~n~~i~~ 303 (540)
+-+|+ +.|++--.-||=.+-+|||.+..
T Consensus 281 s~vQ~---~YWnvGfl~Yw~~~niPnFlla~ 308 (443)
T PF04188_consen 281 SFVQS---HYWNVGFLRYWTLKNIPNFLLAL 308 (443)
T ss_pred HHHHH---HHHccchHHhccccccchHHHHH
Confidence 66664 48888888888666778876543
No 15
>COG5542 Predicted integral membrane protein [Function unknown]
Probab=95.85 E-value=0.42 Score=51.36 Aligned_cols=170 Identities=18% Similarity=0.231 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCc-hhHHHHHHHHHhhhhhhhhcccc-CcchHHHHHHHHHHHHHhhhchhHHHH
Q 009200 127 YAVRLFLGLLSVTTDAVLVVALSRKYGR-RLASYTLAMLCLTSGCFFASTSF-LPSSFSMYAISLASGFFLLEKYAMAVA 204 (540)
Q Consensus 127 ~~~Rl~lallsa~~d~~~~~~~~~~~g~-~~a~~~l~l~~~s~~~~~~strt-lpnSf~m~~~~~al~~~l~~~~~~ai~ 204 (540)
....+..-+..+.+-+.+|+..++++|. +.++++..+..+++...+.++=. -.+|+=|.+.+.+++.+-.++...+.+
T Consensus 117 l~~~l~s~~~~~~~ay~lY~~tk~~y~~~~~a~fa~i~~~~~P~~i~~s~iw~~teSlf~ll~~l~iyf~~~k~~~~a~~ 196 (420)
T COG5542 117 LAIKLFSNIADFVAAYFLYKITKLRYGLGSMARFATILVILSPSVIYNSAIWGQTESLFTLLSILAIYFFSIKKQIPALF 196 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhhheEEEEEeccHHHhhhhHHhccchHHHHHHHHHHHHHHccchhHHHH
Confidence 4455666677788889999999999997 78888876666666544443321 258888888888888887788999999
Q ss_pred HHHHHHHhhhhhHHHhHHHHHHHHHHH--HHHHHHHHHHHHH-HHHHHH-----------HHHHHhhhcCcccchhhhhh
Q 009200 205 VSAAGVILGWPFSILAFLPVVFYSLAR--RFKQAFLAGAATS-VTLLAL-----------SVFVDYQYYRRWTSSVLNLV 270 (540)
Q Consensus 205 ~~ala~i~~~P~a~~l~~Pl~l~~l~~--~~~~~l~~~i~~~-l~~l~~-----------~v~iDs~fYg~~~~~~lN~l 270 (540)
+.++|+.. ||.+++ +.|+.+..+++ +.+... ..+..+ +....+ ....|-+.=+...+.+.+..
T Consensus 197 ~faLa~l~-Rsngi~-~~p~fl~~~ik~~~ik~i~-~~l~~~~l~~~~ll~~~~~~~~~~~~~~~~y~~~~~~f~~~~~~ 273 (420)
T COG5542 197 FFALATLF-RSNGIF-LSPLFLIPLIKNRKIKIIW-YLLPSGSLTYLSLLMPAWILGRNAFEIFLGYWRQSNGFKEQGKN 273 (420)
T ss_pred HHHHHHHh-ccchhH-HHHHHHHHHHhhhhHHHhh-hhhhhHHHHHHHHHHHHHHhCccchhhhhhhhcccccchHHHhc
Confidence 99999976 676544 66677777776 222221 112211 111111 11223222234567778888
Q ss_pred hhhhcCCCCCccccccchhHHHHHhhhhh
Q 009200 271 VYNVVGGGESHLYGIEGPLYYLRNAFNNF 299 (540)
Q Consensus 271 ~yNv~~~~gs~~yGt~Pw~~Y~~~~l~n~ 299 (540)
+.|+-+..+++.|++.=.-+-+.+-.+|+
T Consensus 274 ~~~iy~~I~~~~w~vg~~~~~~~~~~~~~ 302 (420)
T COG5542 274 APNIYSWIPNNYWNVGLPKYWISNNIPNF 302 (420)
T ss_pred chHHHHhhccceeeeeeeEEeeccCCccH
Confidence 88888877777888763233344444554
No 16
>PF04922 DIE2_ALG10: DIE2/ALG10 family; InterPro: IPR007006 Members of this entry are glycosyltransferases, belonging to the ALG10 family. The majority of the members are annotated as alpha-1,2 glucosyltransferas. The ALG10 protein from Saccharomyces cerevisiae (Baker's yeast) encodes the alpha-1,2 glucosyltransferase of the endoplasmic reticulum. This protein has been characterised in Rat as potassium channel regulator 1 [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane
Probab=91.96 E-value=3.7 Score=44.25 Aligned_cols=142 Identities=15% Similarity=0.129 Sum_probs=74.1
Q ss_pred CccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHH-HHHHHHhhCCCchHHHHHHHHHHHHHHH-HHHHHHH
Q 009200 68 CDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELV-GRPASWLFAEDKVRVFYAVRLFLGLLSV-TTDAVLV 145 (540)
Q Consensus 68 ~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~-~~~~~~~lg~~~~~~~~~~Rl~lallsa-~~d~~~~ 145 (540)
-||.|---.--+|--..+. ||+| .|=+.=++.+.+.. ..+.....+.+.. ...|.+.++.+. ..-+.++
T Consensus 9 mDEiFHipQaq~YC~g~f~----~WDp--KITTpPGLYlls~~~l~~~~~~~~~~~~---~~LR~~N~l~~~~~~~~l~~ 79 (379)
T PF04922_consen 9 MDEIFHIPQAQAYCRGRFT----EWDP--KITTPPGLYLLSVAALFPGSWFFGCSSL---SVLRSTNLLFALVVLPWLIY 79 (379)
T ss_pred ccchhhhHHHHHHHhchhh----hhCC--ccCCCchHHHHHHHHHhhHHHhhcccch---HHHHHHHHHHHHHHHHHHHH
Confidence 3998876655455443222 5655 55554333332322 1222222333322 228888877766 4555555
Q ss_pred HHHHHhh---CchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHh
Q 009200 146 VALSRKY---GRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILA 220 (540)
Q Consensus 146 ~~~~~~~---g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l 220 (540)
+.++..- +.....++ +-.++-+-.|+.+-=+..+..++..++.+....+++++..+..+..+|+++ |+|+++-
T Consensus 80 ~~~~~~~~~~~~~~~~~a-~~ialfPllfFFsfLYYTDv~St~~VL~~yl~~~~~~~~~sal~g~~sv~f-RQTNIvW 155 (379)
T PF04922_consen 80 RILRFLNPRRSRKAILSA-LNIALFPLLFFFSFLYYTDVWSTTFVLLMYLASLKRRHWLSALFGLLSVLF-RQTNIVW 155 (379)
T ss_pred HHHHHHhhhhHHHHHHHH-HHHHHhhHHHHhhHHHHhcHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH-hcchHHH
Confidence 5554221 11111122 222334445555544555777777777666556667776666666666655 8999873
No 17
>COG1287 Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only]
Probab=90.82 E-value=13 Score=43.69 Aligned_cols=102 Identities=19% Similarity=0.246 Sum_probs=70.1
Q ss_pred CCCCccccccHHHHHHHHhcc---Ccccccc-cCCCCCc-hhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Q 009200 65 IHDCDEVFNYWEPLHYLLYKS---GFQTWEY-SSEFALR-SYLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVT 139 (540)
Q Consensus 65 i~~~DE~fq~~Epah~lv~G~---G~~TWE~-sp~~~iR-S~~~p~l~a~~~~~~~~~lg~~~~~~~~~~Rl~lallsa~ 139 (540)
+.+.|.+||+-+....+..|. ....|+. -++..+. .-+++++.+..+.++....+ .....+.-.+=+++..+
T Consensus 48 ~~e~Dpyy~~r~~~~~l~~g~~~~~~~~~~~YP~G~~i~~~pl~~~l~~~~~~~~~~~~~---~~~~~~~~~~PailG~L 124 (773)
T COG1287 48 FGEFDPYYHYRLIENLLKNGPPRDFFDPYDNYPPGSPIDFPPLFLYLTAALGLILGSIFP---VSLETAALLFPAILGVL 124 (773)
T ss_pred cCCCCcHHHHHHHHHHHHhCCCccCCChhhcCCCCCCCCCCchHHHHHHHHHHHHHccCc---hHHHHHHHHhhHHHhhH
Confidence 568999999988888777773 3455555 4544455 55555555555554444333 22333444445666677
Q ss_pred HHHHHHHHHHHhhCchhHHHHHHHHHhhhh
Q 009200 140 TDAVLVVALSRKYGRRLASYTLAMLCLTSG 169 (540)
Q Consensus 140 ~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~ 169 (540)
+-...|..+++..|.+.+.+..++...+++
T Consensus 125 ~vI~vYl~~r~i~~~~~g~~aa~ll~~~p~ 154 (773)
T COG1287 125 TVIPVYLLGRRILGDKTGLLAALLLALAPG 154 (773)
T ss_pred HHHHHHHHHHHHhcchhhHHHHHHHHHhhH
Confidence 778889999999999999999999988887
No 18
>PLN02841 GPI mannosyltransferase
Probab=89.41 E-value=16 Score=40.03 Aligned_cols=163 Identities=11% Similarity=0.071 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHhhhcCCC-------CCccc-cccHHHHHHHHhc---cCcccccccCCCCCchhHHHHHHHHHHHHHH
Q 009200 47 VPVFALGMLRYMSATTNIIH-------DCDEV-FNYWEPLHYLLYK---SGFQTWEYSSEFALRSYLYILFHELVGRPAS 115 (540)
Q Consensus 47 ~~~~~ll~~Rl~~al~~~i~-------~~DE~-fq~~Epah~lv~G---~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~ 115 (540)
.++..-+++|+.-..+..+. -+|-- .-..|-+.+...| |..-|..|+| + + +.+..|
T Consensus 10 ~vll~a~~lRl~L~~yg~~~D~~~eVsytdidY~vftDga~lv~~G~SPY~r~TYrytP---------L-L-a~LllP-- 76 (440)
T PLN02841 10 SLLLASALLRVALIVYGEWQDAHMEVRYTDVDYLVFSDAAALVASGKSPFARDTYRYSP---------L-L-ALLLVP-- 76 (440)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccccccccchHHHHHHHHHHHcCCCCCCCCCCCcCh---------H-H-HHHHcc--
Confidence 45555667787666554322 23433 3346777777777 4566777766 2 2 221111
Q ss_pred HhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHH
Q 009200 116 WLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRK-YGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFF 194 (540)
Q Consensus 116 ~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~-~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~ 194 (540)
+.....-..+++-++.=.++-+.+++..++. ...+.+.+...+-++||...-.++|--.+++...+++.+++..
T Consensus 77 -----n~~~~~~fgk~LF~l~Dll~a~ll~~il~~~~~~~~~~~~~a~~wL~NPlti~istrGSse~i~~~lvl~~L~~l 151 (440)
T PLN02841 77 -----NSLLHRSWGKFLFSAADLLVGLFIHTILRLRGVPEKVCTWSVMVWLFNPFTFTIGTRGNCEPIVCAVILWILICL 151 (440)
T ss_pred -----hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCccccccHHHHHHHHhCcHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 0000012344444444444455555555432 1123445556677899999999999999999988888888888
Q ss_pred hhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHH
Q 009200 195 LLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYS 228 (540)
Q Consensus 195 l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~ 228 (540)
.+++...+.++.|+++-+ ....++..+|+.++.
T Consensus 152 ~~g~~~~Aa~~lglavhf-kiYPiIy~~Pi~l~l 184 (440)
T PLN02841 152 MNGRLLQAAFWYGLVVHF-RIYPIIYALPIILVL 184 (440)
T ss_pred HcCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHh
Confidence 899999999999988866 466677888887654
No 19
>PF09594 DUF2029: Protein of unknown function (DUF2029); InterPro: IPR018584 This is a putative transmembrane protein from prokaryotes. It is likely to be conserved between Mycobacterium species []. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=89.29 E-value=22 Score=34.50 Aligned_cols=124 Identities=22% Similarity=0.184 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCch--hHHHH---HHHHHhhhhhhhhcc
Q 009200 101 YLYILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRR--LASYT---LAMLCLTSGCFFAST 175 (540)
Q Consensus 101 ~~~p~l~a~~~~~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~--~a~~~---l~l~~~s~~~~~~st 175 (540)
|.||=..+.+..++.. ++ .-..+.+..+++..+.....+...+..+.+ ..... .....+.+. .....
T Consensus 1 ~~YpP~~~~l~~p~~~-l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~ 72 (241)
T PF09594_consen 1 YVYPPLFALLFAPLAL-LP------FPVAFLLWALLSLAALALAVRLLLRRLGRRKPPGRALLLALLLLAFPPV-LSALG 72 (241)
T ss_pred CcCcHHHHHHHHHHHH-cC------HHHHHHHHHHHHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHH-HHHHH
Confidence 3455455555455543 22 223444455555555555555555555542 11111 123333332 33333
Q ss_pred ccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH-HHHHHH
Q 009200 176 SFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR-RFKQAF 237 (540)
Q Consensus 176 rtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~-~~~~~l 237 (540)
.--.|.+.+.+...++..+.++|...+..+.+++..+ .++.+++.+ ..+.+ ++|...
T Consensus 73 ~gq~~~l~~~l~~~a~~~~~r~r~~~agv~lgla~~~-K~~p~~~l~----~ll~~r~~r~~~ 130 (241)
T PF09594_consen 73 LGQFDLLVAALLLLALLALRRGRPWLAGVLLGLAAAI-KLYPALLLP----ALLIRRRWRAAL 130 (241)
T ss_pred hccHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH-HHHHHHHHH----HHHhcchHHHHH
Confidence 3344555656666666666667778888888888766 555444433 23334 566555
No 20
>PF02366 PMT: Dolichyl-phosphate-mannose-protein mannosyltransferase ; InterPro: IPR003342 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Dolichyl-phosphate-mannose-protein mannosyltransferase proteins 2.4.1.109 from EC belong to the glycosyltransferase family 39 (GT39 from CAZY) and are responsible for O-linked glycosylation of proteins. They catalyse the reaction: Dolichyl phosphate D-mannose + protein -> dolichyl phosphate + O-D-mannosyl-protein. The transfer of mannose to seryl and threonyl residues of secretory proteins is catalyzed by a family of protein mannosyltransferases in Saccharomyces cerevisiae coded for by seven genes (PMT1-7). Protein O-glycosylation is essential for cell wall rigidity and cell integrity and this protein modification is vital for S. cerevisiae [].; GO: 0000030 mannosyltransferase activity, 0006493 protein O-linked glycosylation, 0016020 membrane
Probab=88.30 E-value=28 Score=34.48 Aligned_cols=71 Identities=28% Similarity=0.340 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhC-chhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh
Q 009200 126 FYAVRLFLGLLSVTTDAVLVVALSRKYG-RRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL 196 (540)
Q Consensus 126 ~~~~Rl~lallsa~~d~~~~~~~~~~~g-~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~ 196 (540)
....|+..+++++.+-...|...++..+ ...+....++.++++..+..+..-+.++..+.++++++..+.+
T Consensus 82 ~~~~R~~~~l~~~~~~~l~y~~~~~~~~s~~~al~aa~l~~~~~~~~~~sr~~~~D~~l~~f~~la~~~~~~ 153 (245)
T PF02366_consen 82 YWAARLPSALFGALTVPLVYLILRRLFGSRRAALLAALLLALDPSLIVQSRYALLDSILLFFILLAIYCLLR 153 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999988777 4577777788888888888887778888887777777766644
No 21
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=84.05 E-value=97 Score=36.58 Aligned_cols=26 Identities=23% Similarity=0.294 Sum_probs=21.8
Q ss_pred ccchhhchhhHHHHHHHHHhhhcccc
Q 009200 345 EERFLYPIYPLICVAASAVIESFPDI 370 (540)
Q Consensus 345 E~RFL~Pi~Pll~l~aAi~l~~l~~~ 370 (540)
-.||.|...+++++.++.++..+.+.
T Consensus 338 ~~R~~fi~~f~~~~~~~~~l~~~~~~ 363 (843)
T PF09586_consen 338 PYRWSFIFIFLISLLAARGLEELKKI 363 (843)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 48999999999999999999876543
No 22
>PF10131 PTPS_related: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein; InterPro: IPR018776 This entry is found in various bacterial and archaeal hypothetical membrane proteins, as well as in tetratricopeptide TPR_2 repeat protein. Its function has not yet been established, though it shows similarity to 6-pyruvoyl-tetrahydropterin synthase.
Probab=82.86 E-value=97 Score=35.68 Aligned_cols=23 Identities=13% Similarity=0.137 Sum_probs=19.2
Q ss_pred ccchhhchhhHHHHHHHHHhhhc
Q 009200 345 EERFLYPIYPLICVAASAVIESF 367 (540)
Q Consensus 345 E~RFL~Pi~Pll~l~aAi~l~~l 367 (540)
=+||+....+++++.+|+.+...
T Consensus 257 p~RFl~i~~~~~~ll~a~~~~~~ 279 (616)
T PF10131_consen 257 PWRFLSIASVFLALLGALLLWRI 279 (616)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999998887654
No 23
>COG4745 Predicted membrane-bound mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=78.50 E-value=23 Score=39.06 Aligned_cols=129 Identities=16% Similarity=0.141 Sum_probs=71.7
Q ss_pred HHHHHHHHHhhhcCCCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCchHHHHHHH
Q 009200 51 ALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKVRVFYAVR 130 (540)
Q Consensus 51 ~ll~~Rl~~al~~~i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~~~~~~~R 130 (540)
..++.|+.+-=+- -.|-||.=---=.+.++- .-+|||.| .+- .|+++-+- +.+-+++|.+... .|
T Consensus 24 ~Al~~RL~~Lg~r-~~h~DEs~~~~w~Lk~l~----~Gaw~YrP--i~H---GPfL~hvn-~avF~~lGasDat----aR 88 (556)
T COG4745 24 IALLARLYNLGLR-PFHFDESRHATWILKYLE----QGAWSYRP--IYH---GPFLYHVN-YAVFGLLGASDAT----AR 88 (556)
T ss_pred HHHHHHHHhcCCC-ccccchhhHHHHHHHHHh----cCcceecc--ccc---Cchhhhhh-hhhhhhcccchhh----hh
Confidence 3456677654443 556688422111233333 34899988 433 35554444 3333456765543 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchH-HHHHHHHHHHHHhh
Q 009200 131 LFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSF-SMYAISLASGFFLL 196 (540)
Q Consensus 131 l~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf-~m~~~~~al~~~l~ 196 (540)
++-++...+.-.. -.+-++++|..-..+...+.++|+.+.|+| |+.=|-+ -..|+..+.+...|
T Consensus 89 lvvAv~G~llpL~-awL~R~rL~d~evlal~~LLA~sPvlVYYS-RFmR~Dl~la~ftl~aVg~~vR 153 (556)
T COG4745 89 LVVAVTGVLLPLT-AWLYRTRLGDKEVLALATLLAFSPVLVYYS-RFMRNDLLLAAFTLLAVGFAVR 153 (556)
T ss_pred hhHHHhhhHHHHH-HHHHHHhccchHHHHHHHHHhcChhhhhHH-HHHhhhHHHHHHHHHHHHHHHH
Confidence 6655544432222 223456788776777778888999887776 5555544 34555556666654
No 24
>PF11028 DUF2723: Protein of unknown function (DUF2723); InterPro: IPR021280 This family is conserved in bacteria. The function is not known.
Probab=77.29 E-value=72 Score=30.79 Aligned_cols=47 Identities=26% Similarity=0.296 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 009200 106 FHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGR 154 (540)
Q Consensus 106 l~a~~~~~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~ 154 (540)
+|..+++.+.. +. +...+-+-+-++.++.++.+-..+|..+.+..++
T Consensus 22 lf~llg~lf~~-lp-~~~~ia~~vNl~Sal~sA~tv~~l~~~~~~l~~~ 68 (178)
T PF11028_consen 22 LFTLLGRLFSL-LP-DFGNIAWRVNLLSALSSALTVLFLFWSITRLLRK 68 (178)
T ss_pred HHHHHHHHHHH-cC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555565443 34 2222334456788899999999999988877655
No 25
>PF14897 EpsG: EpsG family
Probab=76.57 E-value=47 Score=33.81 Aligned_cols=43 Identities=19% Similarity=0.411 Sum_probs=33.3
Q ss_pred chHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHH
Q 009200 180 SSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPV 224 (540)
Q Consensus 180 nSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl 224 (540)
+++++...++|+.+..++|..+++.+..+|..+ ..++++.+|+
T Consensus 115 q~~A~~~~~~a~~~~~~~k~~~~~~~~lla~~f--H~Saii~l~~ 157 (330)
T PF14897_consen 115 QSLAISFFLLALSYLYKKKWIKFILLVLLAILF--HYSAIIFLPL 157 (330)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 889988888888888888888888887777754 5566666665
No 26
>TIGR03459 crt_membr carotene biosynthesis associated membrane protein. This model represents a family of hydrophobic and presumed membrane proteins. The genes encoding these proteins are syntenically associated with (found proximal to) genes of carotene biosynthesis ususally including phytoene synthase (crtB), phytoene dehydrogenase (crtI) and geranylgeranyl pyrophosphate synthase (ispA).
Probab=75.50 E-value=1.4e+02 Score=33.25 Aligned_cols=110 Identities=13% Similarity=-0.004 Sum_probs=68.2
Q ss_pred HHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhh-hhccccCcchHHHHHHHHHHHH
Q 009200 115 SWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCF-FASTSFLPSSFSMYAISLASGF 193 (540)
Q Consensus 115 ~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~-~~strtlpnSf~m~~~~~al~~ 193 (540)
..+.|.+...-...-|++..+--..+-+..-|+.++ .|.+- ...+.+...|+.+. |...-..-+++-+.+.+.++..
T Consensus 155 ~~l~g~~i~~~v~~~Rl~~l~g~~l~~w~~~rLar~-~g~~~-~~AlWL~~~NPLviihlvgg~HnealM~gl~l~gl~~ 232 (470)
T TIGR03459 155 TTVTGDNVTAGTLAFKLLSLPGLAVMVWAVPKLATH-LGGNP-TVALWLGVLNPLVVIHLIGGMHNEMLMVGLVSAGILL 232 (470)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH-HHHHHHHHcCchhhhhhhcchhHHHHHHHHHHHHHHH
Confidence 334465555555778988777777778888888874 44332 22333344677643 3333444555665666667777
Q ss_pred HhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHH
Q 009200 194 FLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYS 228 (540)
Q Consensus 194 ~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~ 228 (540)
.+++|...++.++++++.+ .+++ ++.+|+..+.
T Consensus 233 ~~r~~~~~g~vli~~a~~V-K~~a-~l~Lpf~~~~ 265 (470)
T TIGR03459 233 ALKRRPVAGIALIAVAVAL-KATA-GIALPFVVWI 265 (470)
T ss_pred HHhcccHHHHHHHHHHHHH-hHHH-HHHHHHHHHH
Confidence 7788888888888888766 4444 3455665544
No 27
>KOG3893 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=73.48 E-value=59 Score=34.40 Aligned_cols=150 Identities=13% Similarity=0.114 Sum_probs=90.7
Q ss_pred CChHHHHHHHHHHHHHHhhhcCCCCCccccccH--------HHHHHHHhc---cCcccccccCCCCCchhHHHHHHHHHH
Q 009200 43 LGWFVPVFALGMLRYMSATTNIIHDCDEVFNYW--------EPLHYLLYK---SGFQTWEYSSEFALRSYLYILFHELVG 111 (540)
Q Consensus 43 ~~~~~~~~~ll~~Rl~~al~~~i~~~DE~fq~~--------Epah~lv~G---~G~~TWE~sp~~~iRS~~~p~l~a~~~ 111 (540)
.+......+.++.|++-..+.+++|-.-.=+|. +-+.+..-| +...|+.|+| +.+++.
T Consensus 19 ~~~~~~llva~l~Ri~Lv~Yg~~hD~~~~v~~TDIDY~VftDaar~Vs~G~sPf~R~TYRYtP-----------~la~ll 87 (405)
T KOG3893|consen 19 TSFFTHLLVAFLARIALVFYGQLHDRQSAVPYTDIDYKVFTDAARQVSAGDSPFARATYRYTP-----------ILAWLL 87 (405)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcchhccCCccccceeEeehhhHHhhcCCChhhhhhhcccH-----------HHHHHh
Confidence 344455566778898888877655433322222 223333333 2456888876 223221
Q ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHH
Q 009200 112 RPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALS-RKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLA 190 (540)
Q Consensus 112 ~~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~-~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~a 190 (540)
-| .+.+.+ -..+++.+..-.+.-+..+|+.. |..+.+-+.....+-+.++....-|||=-.+|+...++++.
T Consensus 88 ~p--ni~~~p-----~~GK~Lf~~~Dll~a~L~~kLl~~~~i~~~~a~~~~~fWLlNPl~aiIStRGNaesi~~~lvi~~ 160 (405)
T KOG3893|consen 88 TP--NIYLFP-----AWGKLLFAIFDLLIATLIYKLLHMRSISRKQALIYASFWLLNPLTAIISTRGNAESIVAFLVILT 160 (405)
T ss_pred cc--ceecCc-----hHHHHHHHHHHHHHHHHHHHHHhhhhcchhhhhHhhhhhhcCchheeeecCCchHHHHHHHHHHH
Confidence 11 011111 12455555555666677788887 66777777777777788998889999999999998888877
Q ss_pred HHHHhhhchhHHHHHHHHHH
Q 009200 191 SGFFLLEKYAMAVAVSAAGV 210 (540)
Q Consensus 191 l~~~l~~~~~~ai~~~ala~ 210 (540)
++...++....+...-|+++
T Consensus 161 lyllqK~~v~~A~l~~GlaI 180 (405)
T KOG3893|consen 161 LYLLQKSEVFLAGLAHGLAI 180 (405)
T ss_pred HHHHHHhHHHHHHHHhhhee
Confidence 76665555555555555443
No 28
>KOG2575 consensus Glucosyltransferase - Alg6p [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=66.85 E-value=2e+02 Score=31.51 Aligned_cols=138 Identities=14% Similarity=0.152 Sum_probs=73.5
Q ss_pred CcccccccCCCCCchhHHHHHHHHHHHHHHH-h--h----CCCchHHHHHHHHHHHHHHHHHHHHHH--------HHHHH
Q 009200 86 GFQTWEYSSEFALRSYLYILFHELVGRPASW-L--F----AEDKVRVFYAVRLFLGLLSVTTDAVLV--------VALSR 150 (540)
Q Consensus 86 G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~-~--l----g~~~~~~~~~~Rl~lallsa~~d~~~~--------~~~~~ 150 (540)
..|-|-- +|+.=+.-+-+++.++++.+.. . + |..+...=...|. ....+|..+| +...|
T Consensus 90 DLqYWGL--DYPPLTAYhSyl~G~i~~f~NP~wvaL~tSRGfES~~hKlfMR~----TViisd~liy~Pa~ify~~~~~r 163 (510)
T KOG2575|consen 90 DLQYWGL--DYPPLTAYHSYLLGIIGNFINPEWVALHTSRGFESIAHKLFMRS----TVIISDLLIYLPALIFYFKWLHR 163 (510)
T ss_pred ccceecC--CCCcHHHHHHHHHHHHHhhcChhHhhhhccCCcccHHHHHHHHH----HHHHHhHHHHhhHHHHHHHHhhh
Confidence 6788877 5666666666667666554431 1 1 2222221133342 2222232222 22223
Q ss_pred hhCchhHHHHHHHHHhhhhhh-hhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHH
Q 009200 151 KYGRRLASYTLAMLCLTSGCF-FASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSL 229 (540)
Q Consensus 151 ~~g~~~a~~~l~l~~~s~~~~-~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l 229 (540)
..+..-....+.+.++.++.. .=-.++-=||...-+++.|++..+++.+..+.++..+|.-. .+.++-.+.|+..+.+
T Consensus 164 ~~~~~~~~a~~~~iLl~P~L~LID~GHFQYNsisLGl~~~ai~~ll~~~~~~as~~F~LAlny-KQMeLY~A~pfF~fLL 242 (510)
T KOG2575|consen 164 TRSKKSKIAYAALILLYPSLLLIDHGHFQYNSISLGLTLYAIAALLKNFYVLASVLFVLALNY-KQMELYHALPFFAFLL 242 (510)
T ss_pred ccCcccHHHHHHHHHhCCceEEEecCcceechhHHHHHHHHHHHHHHhHHHHHHHHHHHHHhH-HHHHHHhchHHHHHHH
Confidence 333322222245555666532 12234444888888889999888888887776665555433 6667666777665555
Q ss_pred H
Q 009200 230 A 230 (540)
Q Consensus 230 ~ 230 (540)
-
T Consensus 243 g 243 (510)
T KOG2575|consen 243 G 243 (510)
T ss_pred H
Confidence 4
No 29
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=66.56 E-value=2.6e+02 Score=32.68 Aligned_cols=141 Identities=20% Similarity=0.188 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHHHHHHHHHHHHHHh-------hC
Q 009200 47 VPVFALGMLRYMSATTNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYILFHELVGRPASWL-------FA 119 (540)
Q Consensus 47 ~~~~~ll~~Rl~~al~~~i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~-------lg 119 (540)
.++.+.+.+|+...-.+..---|| +|+- ++|-++|+..+-+..-..+.-++.+..++....- -|
T Consensus 29 ~lt~ls~~~R~~~i~~~~~VVfdE-------~hfg--kFaS~Yl~~~~~fDvHPPL~kml~al~~~L~g~~g~f~f~~~g 99 (699)
T COG1928 29 LLTVLSFIVRFWKIGNPNTVVFDE-------AHFG--KFASYYLNGTPFFDVHPPLGKMLIALVGGLEGYDPPFDFQLIG 99 (699)
T ss_pred HHHHHHHHHHHHhcCCCCeEEEee-------eeec--cchHHhhcCCcccccCCcHHHHHHHhhhhhhccCCCcccccCC
Confidence 334445667777666665333466 4432 2467777777666665555555556555544211 01
Q ss_pred CCch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhcccc-CcchHHHHHHHHHHHHHh
Q 009200 120 EDKV---RVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSF-LPSSFSMYAISLASGFFL 195 (540)
Q Consensus 120 ~~~~---~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strt-lpnSf~m~~~~~al~~~l 195 (540)
.+.. ......|.+.|++++++-..+|..+++.-..+...+...+.....+.+...+|+ |=+++.+...+.+.+.+.
T Consensus 100 ~~~~~~~~~y~~mR~f~A~lgsl~vpl~y~t~r~~~~s~l~~~l~~llv~~dn~~~t~sR~ILLDs~LlfF~~~~~y~~~ 179 (699)
T COG1928 100 LTEYPFGYNYVGMRFFNALLGSLTVPLVYLIARRIGYSRLVAALAGLLVAFDNSFVTESRFILLDSFLLFFIVAAAYCFL 179 (699)
T ss_pred cccccCCCChHHHHHHHHHHHhHHHHHHHHHHHHhcchHHHHHHHHHHHHhccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 134678999999999999999988875333333444444444556666667774 667777777666666665
Q ss_pred h
Q 009200 196 L 196 (540)
Q Consensus 196 ~ 196 (540)
+
T Consensus 180 r 180 (699)
T COG1928 180 R 180 (699)
T ss_pred H
Confidence 4
No 30
>KOG2647 consensus Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase [General function prediction only]
Probab=63.97 E-value=1.6e+02 Score=32.23 Aligned_cols=75 Identities=9% Similarity=0.097 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHhhCc-hhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHH
Q 009200 136 LSVTTDAVLVVALSRKYGR-RLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVI 211 (540)
Q Consensus 136 lsa~~d~~~~~~~~~~~g~-~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i 211 (540)
+...+-..+|..++..++. +.++.+.++-++|+-.-+.++ -.++|+-+..+..++....+++...+..+.+++..
T Consensus 135 ~f~la~~~Lyql~~~~~~~~k~s~~a~liFcfnPAsIF~ts-~YSEsLfa~~s~~Gi~~~~~~~~~~~~~~~~l~~~ 210 (444)
T KOG2647|consen 135 FFMLAAVALYQLTRIILHDPKISFYAALLFCFNPASIFLTA-GYSESLFALFSFLGILFLEKGRQFTGTLLFSLATL 210 (444)
T ss_pred HHHHHHHHHHHHHHHHhcChhHHhhhhheeEecchHhhhhH-HhhHHHHHHHHHHHHHHHhcCCccceehHHHHHHH
Confidence 3445677888888888876 677777777777776544443 36788888888888887777654333333344333
No 31
>KOG2292 consensus Oligosaccharyltransferase, STT3 subunit [Posttranslational modification, protein turnover, chaperones]
Probab=63.09 E-value=69 Score=36.12 Aligned_cols=112 Identities=18% Similarity=0.141 Sum_probs=61.0
Q ss_pred HHHHHHHhhhc--CCCCCccccccHHHHHHHHhc-cCccccc----ccC-CCCCchhHHHHHH--HHHHHHHHHhhCCC-
Q 009200 53 GMLRYMSATTN--IIHDCDEVFNYWEPLHYLLYK-SGFQTWE----YSS-EFALRSYLYILFH--ELVGRPASWLFAED- 121 (540)
Q Consensus 53 l~~Rl~~al~~--~i~~~DE~fq~~Epah~lv~G-~G~~TWE----~sp-~~~iRS~~~p~l~--a~~~~~~~~~lg~~- 121 (540)
++.|+++.+=- .|+.-|-+|||=.-.|.--.| |.+.-|- |-| +--+-.-+||.+. ++..+...+.++.+
T Consensus 34 fssRLFaVirfESiIHEFDP~FNYR~T~~l~~~GfY~F~NWFDdRaWYPLGRiiGGTvYPGLmiTsg~I~~~L~~L~i~v 113 (751)
T KOG2292|consen 34 FSSRLFAVIRFESIIHEFDPWFNYRATRFLVENGFYKFLNWFDDRAWYPLGRIIGGTVYPGLMITSGLIYWVLHFLNIPV 113 (751)
T ss_pred HHHHHHHHHHHHHHhhccCchhhhHHHHHHHHhhHHHHHhhcccccccccceeecccccchHHHHHHHHHHHHHHcccce
Confidence 44577766544 388999999998765555555 3444442 112 1122334566542 33333333444321
Q ss_pred ---chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhh
Q 009200 122 ---KVRVFYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSG 169 (540)
Q Consensus 122 ---~~~~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~ 169 (540)
..-+|.+| ++|.++-+..|-+.++..+...+..+..+.+..+|
T Consensus 114 ~Ir~VCVflAP-----~FSg~TsiaTY~ltkEl~~~gaGL~AA~fiaivPg 159 (751)
T KOG2292|consen 114 HIRNVCVFLAP-----LFSGLTSIATYLLTKELKSAGAGLLAAAFIAIVPG 159 (751)
T ss_pred eehheeeEech-----hhhchHHHHHHHHHHHHhcccccHHHHHHHhhCcc
Confidence 22233333 45666666777777776666666666666666664
No 32
>PF06728 PIG-U: GPI transamidase subunit PIG-U; InterPro: IPR009600 Many eukaryotic proteins are anchored to the cell surface via glycosylphosphatidylinositol (GPI), which is posttranslationally attached to the C terminus by GPI transamidase. The mammalian GPI transamidase is a complex of at least four subunits, GPI8, GAA1, PIG-S, and PIG-T. PIG-U is thought to represent a fifth subunit in this complex and may be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI [].; GO: 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=55.50 E-value=3e+02 Score=29.68 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=58.3
Q ss_pred hHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHH
Q 009200 156 LASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSL 229 (540)
Q Consensus 156 ~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l 229 (540)
.+.....+-++||.....+..--..+++..+.+.+++...+++...+....|+++-+ .+..+.+..|+.+...
T Consensus 122 ~~~lv~~~YLfNP~tIlscva~ST~~f~nl~i~~sl~~a~~g~~~~s~i~lAlatyl-SlYpi~Ll~Plll~l~ 194 (382)
T PF06728_consen 122 SPWLVAAFYLFNPLTILSCVALSTTVFTNLFILLSLYFAVKGNVFLSAISLALATYL-SLYPILLLPPLLLLLY 194 (382)
T ss_pred chHHHHHHHHHCHHHHHHHHhcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Confidence 455666777899998888888888889999999999888888888888888888764 6777777888775443
No 33
>PF02516 STT3: Oligosaccharyl transferase STT3 subunit; InterPro: IPR003674 N-linked glycosylation is a ubiquitous protein modification, and is essential for viability in eukaryotic cells. A lipid-linked core-oligosaccharide is assembled at the membrane of the endoplasmic reticulum and transferred to selected asparagine residues of nascent polypeptide chains by the oligosaccharyl transferase (OTase) complex []. This family consists of the oligsacharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosccharyl transferase (OTase) complex of proteins and is required for its activity [].; GO: 0004576 oligosaccharyl transferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 3AAG_B 2ZAI_D 2ZAG_A 3RCE_A.
Probab=55.47 E-value=76 Score=34.65 Aligned_cols=103 Identities=13% Similarity=0.071 Sum_probs=44.8
Q ss_pred CCCCccccccHHHHHHHHhc-cC----cccccccCCCCCchhHHHHHHHHHHHHHHHhhCCCch-HHHHHHHHHHHHHHH
Q 009200 65 IHDCDEVFNYWEPLHYLLYK-SG----FQTWEYSSEFALRSYLYILFHELVGRPASWLFAEDKV-RVFYAVRLFLGLLSV 138 (540)
Q Consensus 65 i~~~DE~fq~~Epah~lv~G-~G----~~TWE~sp~~~iRS~~~p~l~a~~~~~~~~~lg~~~~-~~~~~~Rl~lallsa 138 (540)
+.+.|++||+.+.....-+| +. +.++-|-|. +-+.--.|++..+. ..+..+++.... ....+.-.+-.++++
T Consensus 29 ~~~~Dpyy~~r~~~~~~~~G~~~~~~~fd~~~~yP~-G~~i~~~pl~~~l~-~~~~~~~~~~~~~~l~~v~~~~ppvl~~ 106 (483)
T PF02516_consen 29 LNEFDPYYHYRLIEYIVNNGIFPFYNWFDPFTWYPW-GRPIDWPPLFPYLT-AAFYAILGGFGPVSLYEVAFWLPPVLGA 106 (483)
T ss_dssp HSS-GGGEETTEE--S-HHHHHHHHHHHHHHS---T-TS---TT-HHHHHH-HHHHHS-SS-HH----HHHHHHHHHHGG
T ss_pred eeCCCHHHHHHHHHHHHHcCCCcccCcCCccccCCC-CCccCcccHHHHHH-HHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 68999999998654444444 21 222222231 21221123332221 122222222111 111122233344444
Q ss_pred HHHHHHHHHHHHhhCchhHHHHHHHHHhhhh
Q 009200 139 TTDAVLVVALSRKYGRRLASYTLAMLCLTSG 169 (540)
Q Consensus 139 ~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~ 169 (540)
++-.-.|-..++..|+..|....++.+.+++
T Consensus 107 L~vi~~y~~~~~~~~~~~Gl~aA~l~a~~p~ 137 (483)
T PF02516_consen 107 LTVIPVYLLGRRLGGRKAGLLAAFLLAISPG 137 (483)
T ss_dssp GGHHHHHHHHHHTT-HHHHHHHHHHHTTSHH
T ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHhHH
Confidence 4445566666666677788888888889887
No 34
>KOG2762 consensus Mannosyltransferase [Carbohydrate transport and metabolism]
Probab=45.29 E-value=4.2e+02 Score=28.69 Aligned_cols=75 Identities=20% Similarity=0.392 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHhhhhh-hhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH
Q 009200 155 RLASYTLAMLCLTSGC-FFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR 231 (540)
Q Consensus 155 ~~a~~~l~l~~~s~~~-~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~ 231 (540)
++.-|.+.+.++|.=. -.+--|.+-+.|+|.+...++...+.+|......+..+|+ .--.++++..|-.+..+.+
T Consensus 132 ~vPp~vlvL~~lskRiHSIfVLRLFND~fa~lll~~~i~~~l~qkw~~gs~~fSlAv--SVKMNvLLyaPall~~lL~ 207 (429)
T KOG2762|consen 132 RVPPWVLVLLCLSKRIHSIFVLRLFNDPFAMLLLYVAILLFLKQKWLVGSIFFSLAV--SVKMNVLLYAPALLLLLLQ 207 (429)
T ss_pred cCChHHHHHHHHHHHHHHhhhhHHhcchHHHHHHHHHHHHHHHHHHHhHhhhheeeh--hhhhhhHHHHHHHHHHHHH
Confidence 4566777777666321 2234589999999999998888888888766554444443 3345677777765555444
No 35
>PF05208 ALG3: ALG3 protein; InterPro: IPR007873 The formation of N-glycosidic linkages of glycoproteins involves the ordered assembly of the common Glc3Man9GlcNAc2 core-oligosaccharide on the lipid carrier dolichyl pyrophosphate. Whereas early mannosylation steps occur on the cytoplasmic side of the endoplasmic reticulum with GDP-Man as donor, the final reactions from Man5GlcNAc2-PP-Dol to Man9GlcNAc2-PP-Dol on the lumenal side use Dol-P-Man []. The ALG3 gene encodes the Dol-P-Man:Man5GlcNAc2-PP-Dol mannosyltransferase.; GO: 0016758 transferase activity, transferring hexosyl groups, 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=41.44 E-value=4.9e+02 Score=28.14 Aligned_cols=81 Identities=16% Similarity=0.315 Sum_probs=51.8
Q ss_pred hhHHHHHHHHHhhhhh-hhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH--
Q 009200 155 RLASYTLAMLCLTSGC-FFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR-- 231 (540)
Q Consensus 155 ~~a~~~l~l~~~s~~~-~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~-- 231 (540)
++.-|.+.+.+.|-=. -.+.-|.+-+.++|.+.-.++..+.++|...+..+..+| ++--..+++.+|-.+..+.+
T Consensus 104 ~~Pp~~~~ll~lSkRlHSI~vLRlFND~~a~~~~~~ai~~~~~~~w~~g~~~yS~a--vSIKMN~LL~~Pall~~~l~~~ 181 (368)
T PF05208_consen 104 KLPPWLLILLCLSKRLHSIFVLRLFNDCFAMLFLYAAILLFQRRRWLLGSLLYSLA--VSIKMNALLFAPALLVLLLQSL 181 (368)
T ss_pred CCCchHHHHHHHHHHHHHhhhhheecHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHHHHcC
Confidence 3455666666655332 235569999999999988888888877766655544444 34456777777766544444
Q ss_pred HHHHHH
Q 009200 232 RFKQAF 237 (540)
Q Consensus 232 ~~~~~l 237 (540)
+..+.+
T Consensus 182 g~~~~~ 187 (368)
T PF05208_consen 182 GLLKTL 187 (368)
T ss_pred CHHHHH
Confidence 444444
No 36
>PF11847 DUF3367: Domain of unknown function (DUF3367); InterPro: IPR021798 This domain is functionally uncharacterised. This domain is found in bacteria and archaea. This presumed domain is typically between 667 to 694 amino acids in length.
Probab=39.22 E-value=6.9e+02 Score=29.26 Aligned_cols=88 Identities=9% Similarity=-0.066 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCchhHHH-HHHHHHhhhhhhhhccccCcch
Q 009200 104 ILFHELVGRPASWLFAEDKVRVFYAVRLFLGLLSVTTDAVLVVALSRK-YGRRLASY-TLAMLCLTSGCFFASTSFLPSS 181 (540)
Q Consensus 104 p~l~a~~~~~~~~~lg~~~~~~~~~~Rl~lallsa~~d~~~~~~~~~~-~g~~~a~~-~l~l~~~s~~~~~~strtlpnS 181 (540)
.+++ ++.+.+.+.+|.+.+ ..=|+..+++-.++-+.++++.++. .|....+. ..+..+.|+.+.-...++.+++
T Consensus 55 LFP~-G~Ff~l~~~lglP~W---i~QRLWwallL~vaf~G~~rLa~~L~igs~~~r~~Aa~~YaLsPr~Lttlg~iSse~ 130 (680)
T PF11847_consen 55 LFPM-GPFFALGDLLGLPDW---ITQRLWWALLLTVAFWGALRLARALGIGSPASRVLAAVAYALSPRVLTTLGAISSET 130 (680)
T ss_pred eccc-hHHHHHhhhccCCHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 3344 333445555666443 4459999999888999999999865 45555544 4455677886665555555555
Q ss_pred HHHHHHHHHHHHHh
Q 009200 182 FSMYAISLASGFFL 195 (540)
Q Consensus 182 f~m~~~~~al~~~l 195 (540)
.-|.+.=+.+--++
T Consensus 131 lP~al~PWvLlPlv 144 (680)
T PF11847_consen 131 LPMALAPWVLLPLV 144 (680)
T ss_pred HHHHHhhHHHHHHH
Confidence 55554444443333
No 37
>COG5650 Predicted integral membrane protein [Function unknown]
Probab=38.99 E-value=90 Score=35.08 Aligned_cols=126 Identities=7% Similarity=0.072 Sum_probs=63.7
Q ss_pred HHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH--HHHH-
Q 009200 159 YTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR--RFKQ- 235 (540)
Q Consensus 159 ~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~--~~~~- 235 (540)
|-..+...|+ +.-...-+-+++..+.+.+.++-. |+|-..++.+.|+|.-+ .+..+++..|+ ++.++| +.+.
T Consensus 199 ~~valv~as~-~v~f~v~~~~DtI~~ffla~a~v~--r~rP~lAGvl~Gls~a~-K~~P~Ivl~pl-l~~~~keyg~~~a 273 (536)
T COG5650 199 LDVALVAASP-LVGFAVFTVFDTIWAFFLAAALVC--RGRPKLAGVLIGLSSAF-KQIPLIVLPPL-LYLIYKEYGLRPA 273 (536)
T ss_pred eeeeeeeccc-eEEEEEecchhHHHHHHHHHHHHh--cCCchHHHHHHHHHHHh-hcCchhhHHHH-HHHHHHhcCcchH
Confidence 3334444555 444445556677776555544433 88889999999988765 56656655544 445555 3332
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhhhcCcccch-----hhhhhhhhhcCCCCCccccccchhH
Q 009200 236 --AFLAGAATSVTLLALSVFVDYQYYRRWTSS-----VLNLVVYNVVGGGESHLYGIEGPLY 290 (540)
Q Consensus 236 --~l~~~i~~~l~~l~~~v~iDs~fYg~~~~~-----~lN~l~yNv~~~~gs~~yGt~Pw~~ 290 (540)
++...+.+.+++-+..+..|=..|-+.+.. .-+--.+|++.+. .-.|+..|-++
T Consensus 274 ~~f~~~aa~t~lLvN~PfiI~~P~aw~~sil~~~~r~~~~~~~~~sI~s~-aG~~~~~P~~F 334 (536)
T COG5650 274 IKFIATAAITWLLVNLPFIILGPRAWVESILLFARRGLIGVGIGISIPSF-AGFYAVDPLLF 334 (536)
T ss_pred HHHHHHHHHHHHHHcCceEEechHHHHHHHHhHHhcCCcccccceecccc-cccccccceEE
Confidence 222222222222233333333333222111 1122234444444 55899999874
No 38
>KOG2552 consensus Major facilitator superfamily permease - Cdc91p [General function prediction only]
Probab=36.77 E-value=3.7e+02 Score=29.05 Aligned_cols=73 Identities=7% Similarity=0.058 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHH
Q 009200 155 RLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYS 228 (540)
Q Consensus 155 ~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~ 228 (540)
..+.+..++.++|+.+...+....+..++...+...++....++...+.+..++++. .-+..+.+.+|+.+..
T Consensus 144 ~i~~~v~l~Yl~NPlTilSCi~~St~~I~N~~v~~~ly~av~~~~~l~a~~la~~t~-~s~yp~~L~~P~l~~L 216 (388)
T KOG2552|consen 144 PIGDLVALLYLFNPLTILSCIGLSTTVIENFAVAVSLYGAVTGRVPLAAFGLAIATH-LSLYPATLTIPLLFLL 216 (388)
T ss_pred cHHHHHHHHHHhCceeeeeeccccchHHHHHHHHHHHHHHHhcchHHHHHHHHHHHh-cccchHHHHHHHHHHH
Confidence 356677788899999888888888888888888888888888888777777788874 4788888999987643
No 39
>KOG3359 consensus Dolichyl-phosphate-mannose:protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=35.56 E-value=8e+02 Score=28.93 Aligned_cols=71 Identities=24% Similarity=0.315 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCch-hHHHHHHHHHhhhhhhhhccc-cCcchHHHHHHHHHHHHHhh
Q 009200 125 VFYAVRLFLGLLSVTTDAVLVVALSRKYGRR-LASYTLAMLCLTSGCFFASTS-FLPSSFSMYAISLASGFFLL 196 (540)
Q Consensus 125 ~~~~~Rl~lallsa~~d~~~~~~~~~~~g~~-~a~~~l~l~~~s~~~~~~str-tlpnSf~m~~~~~al~~~l~ 196 (540)
.....|.+.|++++++--..|-.++. .|.+ .+.+...+...-.--+...+| .|=+|..+...+.+++.+.+
T Consensus 118 ~y~~mR~f~a~lgsl~vp~~y~t~~~-~~~s~~aa~l~allv~~dns~~T~sr~ILLDs~Llff~~~~~y~~~r 190 (723)
T KOG3359|consen 118 PYVGMRLFSALLGSLTVPLAYLTLKE-LGFSRLAAALAALLVLFDNSLVTLSRFILLDSMLLFFMAAAVYCFVR 190 (723)
T ss_pred chHhHHHHHHHHHhHHHHHHHHHHHH-hcccHHHHHHHHHHHhhcccchhhhhHHHHhHHHHHHHHHHHHHHHH
Confidence 35679999999999999999988764 4433 333333333333333444445 36677777777777776654
No 40
>PF05007 Mannosyl_trans: Mannosyltransferase (PIG-M); InterPro: IPR007704 PIG-M has a DXD motif. The DXD motif is found in many glycosyltransferases that utilise nucleotide sugars. It is thought that the motif is involved in the binding of a manganese ion that is required for association of the enzymes with nucleotide sugar substrates [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=32.51 E-value=2.7e+02 Score=28.54 Aligned_cols=54 Identities=22% Similarity=0.304 Sum_probs=41.7
Q ss_pred ccccCcchHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHH
Q 009200 174 STSFLPSSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYS 228 (540)
Q Consensus 174 strtlpnSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~ 228 (540)
|||=-.+|+-..+++..++...++|...+..+.|+|+=+ +=..++.++|+.++.
T Consensus 2 STRGnaEsl~~~lVl~~l~~l~~~~~~~Aa~~lGlaVHf-KIYPiIY~~~~~l~l 55 (259)
T PF05007_consen 2 STRGNAESLLCFLVLLTLYFLLKGRWFLAAILLGLAVHF-KIYPIIYALPILLYL 55 (259)
T ss_pred CCCcchHHHHHHHHHHHHHHHHcCChhHHHHHhhHHHHh-hhccHHHHHHHHHHH
Confidence 678778888888888888888889999998998988765 334466677777654
No 41
>COG5305 Predicted membrane protein [Function unknown]
Probab=31.47 E-value=8.4e+02 Score=27.90 Aligned_cols=71 Identities=15% Similarity=0.165 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHhhhhhhhhccccCcchHHHHHHHHHHHHHhh
Q 009200 126 FYAVRLFLGLLSVTTDAVLVVALSRKYGRRLASYTLAMLCLTSGCFFASTSFLPSSFSMYAISLASGFFLL 196 (540)
Q Consensus 126 ~~~~Rl~lallsa~~d~~~~~~~~~~~g~~~a~~~l~l~~~s~~~~~~strtlpnSf~m~~~~~al~~~l~ 196 (540)
....|..-+++++++-...|...+..+|.+.+..+..+.+.|+.--+++--.=+.++.+..++++....++
T Consensus 116 ~~~~Rsls~L~~~~ai~~~y~l~r~l~~~~~a~la~~~~AisP~~i~~~qe~R~y~L~~~~~lis~~~Ll~ 186 (552)
T COG5305 116 LLASRSLSALLSALAIPLVYWLGRELFGSTTALLAAALMAISPFHIFYSQEARSYALAVATTLISATLLLR 186 (552)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999988888888887666655444556666666666665553
No 42
>PF10190 Tmemb_170: Putative transmembrane protein 170; InterPro: IPR019334 This entry represents a group of putative transmembrane proteins conserved from nematodes to humans. The protein is only approximately 130 amino acids in length. The function is unknown.
Probab=29.41 E-value=72 Score=28.25 Aligned_cols=20 Identities=40% Similarity=0.713 Sum_probs=14.1
Q ss_pred HHHHhcCCCcccchhhchhhH
Q 009200 335 LLFMSMQPHKEERFLYPIYPL 355 (540)
Q Consensus 335 l~i~S~~pHKE~RFL~Pi~Pl 355 (540)
++...+..||--|| +|+..+
T Consensus 29 iA~~~lRkhk~~~f-~pi~~l 48 (105)
T PF10190_consen 29 IAFFTLRKHKFGRF-IPIVIL 48 (105)
T ss_pred HHHHHHhhccchhh-hHHHHH
Confidence 56777788998888 555433
No 43
>PRK13375 pimE mannosyltransferase; Provisional
Probab=22.11 E-value=1.1e+03 Score=25.97 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=31.3
Q ss_pred chHHHHHHHHHHHHHhhhchhHHHHHHHHHHHhhhhhHHHhHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 009200 180 SSFSMYAISLASGFFLLEKYAMAVAVSAAGVILGWPFSILAFLPVVFYSLAR-RFKQAFLAGAATSV 245 (540)
Q Consensus 180 nSf~m~~~~~al~~~l~~~~~~ai~~~ala~i~~~P~a~~l~~Pl~l~~l~~-~~~~~l~~~i~~~l 245 (540)
|.+-|.++... .+++|...++.+++++.-+ .++.+++ .++.+.+ +++.++ .++.+.+
T Consensus 156 N~lL~~Lv~~d---ll~~r~~~aGvliGLAaaI-KlTPavf----~l~lL~~RrWra~~-~A~~t~~ 213 (409)
T PRK13375 156 NVFLMLAVLYA---VYSSRWWLSGLLVGLAAGV-KLTPAIT----GLYFLGARRWAAAA-FSAVVFL 213 (409)
T ss_pred HHHHHHHHHHH---HhcCCccHHHHHHHHHHHh-hhhhHHH----HHHHHHhCHHHHHH-HHHHHHH
Confidence 66666555533 3355656677777877644 6665553 2344555 566544 3333333
No 44
>PHA02887 EGF-like protein; Provisional
Probab=20.37 E-value=28 Score=31.34 Aligned_cols=20 Identities=15% Similarity=0.330 Sum_probs=17.4
Q ss_pred CCCCcEEEeccCCcchhhhh
Q 009200 500 LPLPAGLIEIYTALCLCILH 519 (540)
Q Consensus 500 ~~~Cdy~vd~~~~~~~~~~~ 519 (540)
..+|-|+.|++.|.|-|---
T Consensus 96 HG~C~yI~dL~epsCrC~~G 115 (126)
T PHA02887 96 NGECMNIIDLDEKFCICNKG 115 (126)
T ss_pred CCEEEccccCCCceeECCCC
Confidence 37999999999999999643
No 45
>KOG1771 consensus GPI-alpha-mannosyltransferase III (GPI10/PIG-B) involved in glycosylphosphatidylinositol anchor biosynthesis [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=20.07 E-value=31 Score=37.37 Aligned_cols=38 Identities=8% Similarity=0.013 Sum_probs=34.2
Q ss_pred CCCCccccccHHHHHHHHhccCcccccccCCCCCchhHHH
Q 009200 65 IHDCDEVFNYWEPLHYLLYKSGFQTWEYSSEFALRSYLYI 104 (540)
Q Consensus 65 i~~~DE~fq~~Epah~lv~G~G~~TWE~sp~~~iRS~~~p 104 (540)
-.++||..++-|+.|.+++|.|..-||| -|+-|++..+
T Consensus 174 ~~vldlI~~s~v~~gflvlg~g~liDr~--~yg~~~f~~~ 211 (464)
T KOG1771|consen 174 QPVLDLILFSFVLIGFLVLGLGILIDRI--FYGQWVFPPF 211 (464)
T ss_pred ccchhHHhhHHHHHHHHHHhHHHHHHHH--Hhcceeecch
Confidence 4589999999999999999999999999 7798988744
Done!