Query 009201
Match_columns 540
No_of_seqs 356 out of 2509
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 21:06:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pm9_A Putative oxidoreductase 100.0 7.3E-84 2.5E-88 694.8 46.6 454 77-533 12-476 (476)
2 4bby_A Alkyldihydroxyacetoneph 100.0 4.9E-70 1.7E-74 609.7 45.8 447 77-533 159-658 (658)
3 2uuu_A Alkyldihydroxyacetoneph 100.0 2.7E-69 9.3E-74 593.9 37.6 445 77-533 89-584 (584)
4 1f0x_A DLDH, D-lactate dehydro 100.0 6.9E-68 2.4E-72 579.2 24.2 437 80-538 10-565 (571)
5 1e8g_A Vanillyl-alcohol oxidas 100.0 6.1E-64 2.1E-68 551.2 35.2 441 81-535 23-549 (560)
6 1wvf_A 4-cresol dehydrogenase 100.0 7E-62 2.4E-66 531.1 37.6 442 81-536 19-516 (520)
7 2exr_A Cytokinin dehydrogenase 100.0 2.6E-58 8.8E-63 502.4 11.9 420 78-533 26-519 (524)
8 1w1o_A Cytokinin dehydrogenase 100.0 6.2E-55 2.1E-59 477.7 24.6 439 78-534 30-534 (534)
9 2vfr_A Xylitol oxidase, aldito 100.0 9.4E-41 3.2E-45 355.5 11.4 378 106-529 10-413 (422)
10 3tsh_A Pollen allergen PHL P 4 100.0 1.7E-36 5.9E-41 329.2 27.3 229 79-314 8-250 (500)
11 4feh_A Oxidoreductase DPRE1; a 100.0 6.5E-36 2.2E-40 321.9 24.9 402 105-528 32-471 (481)
12 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.4E-34 4.7E-39 311.1 28.1 208 98-314 20-234 (459)
13 2ipi_A Aclacinomycin oxidoredu 100.0 1.6E-32 5.4E-37 298.9 33.3 195 94-291 32-245 (521)
14 1zr6_A Glucooligosaccharide ox 100.0 1.6E-32 5.5E-37 297.8 31.1 222 83-313 6-236 (503)
15 3vte_A Tetrahydrocannabinolic 100.0 6.4E-33 2.2E-37 300.2 27.3 204 106-316 43-252 (518)
16 3pop_A GILR oxidase; FAD bindi 100.0 5E-32 1.7E-36 292.9 29.8 193 89-286 7-208 (501)
17 2y3s_A TAML; oxidoreductase; H 100.0 1.9E-31 6.6E-36 290.6 33.8 185 97-286 39-232 (530)
18 3rja_A Carbohydrate oxidase; p 100.0 4.1E-32 1.4E-36 292.3 20.9 214 94-314 14-234 (473)
19 3fw9_A Reticuline oxidase; BI- 100.0 1.3E-31 4.4E-36 289.2 19.0 200 106-314 35-242 (495)
20 2wdx_A Putative hexose oxidase 100.0 1E-30 3.5E-35 284.7 19.3 201 98-301 38-258 (523)
21 2i0k_A Oxidoreductase; MIX alp 100.0 1.6E-29 5.4E-34 277.5 28.3 195 104-309 23-240 (561)
22 1hsk_A UDP-N-acetylenolpyruvoy 100.0 6.6E-33 2.3E-37 284.6 0.2 191 78-292 14-213 (326)
23 3tx1_A UDP-N-acetylenolpyruvoy 100.0 1.8E-29 6.1E-34 257.8 9.1 195 78-291 20-217 (322)
24 3js8_A Cholesterol oxidase; ch 100.0 3.9E-28 1.3E-32 261.8 16.5 191 106-308 19-235 (540)
25 3i99_A UDP-N-acetylenolpyruvoy 99.9 2.6E-24 8.8E-29 221.9 15.3 175 100-291 17-199 (357)
26 1uxy_A MURB, uridine diphospho 99.9 8E-24 2.7E-28 217.6 17.2 168 112-290 10-182 (340)
27 2yvs_A Glycolate oxidase subun 99.9 1.8E-23 6.1E-28 202.1 10.2 127 172-303 2-128 (219)
28 2gqt_A UDP-N-acetylenolpyruvyl 99.9 1.4E-23 4.7E-28 208.7 7.8 162 101-290 10-173 (268)
29 1ffv_C CUTM, flavoprotein of c 98.5 9.3E-08 3.2E-12 95.9 6.7 155 117-289 5-177 (287)
30 2w3s_A Xanthine dehydrogenase; 97.7 9.5E-06 3.2E-10 86.4 2.7 154 115-288 175-345 (462)
31 1n62_C Carbon monoxide dehydro 97.7 3.8E-05 1.3E-09 76.9 5.6 120 117-248 5-144 (288)
32 3nvz_B Xanthine dehydrogenase/ 97.5 0.00014 4.7E-09 73.3 6.8 129 113-248 6-157 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.9 0.00045 1.5E-08 69.0 3.7 122 117-248 5-143 (288)
34 3hrd_C Nicotinate dehydrogenas 96.3 0.00068 2.3E-08 68.0 0.2 103 118-221 4-118 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 94.3 0.016 5.6E-07 58.5 2.5 98 118-220 7-118 (324)
36 3unc_A Xanthine dehydrogenase/ 89.0 0.16 5.6E-06 60.5 2.8 108 114-222 230-356 (1332)
37 2wdx_A Putative hexose oxidase 87.7 0.32 1.1E-05 52.3 3.9 26 509-534 497-522 (523)
38 3zyv_A AOH1; oxidoreductase, m 70.9 1 3.6E-05 53.8 0.7 105 115-221 238-362 (1335)
39 3rja_A Carbohydrate oxidase; p 70.8 1.5 5.2E-05 46.4 1.9 26 509-534 445-470 (473)
40 3fw9_A Reticuline oxidase; BI- 67.8 2 6.7E-05 45.8 2.0 27 509-535 467-493 (495)
41 3js8_A Cholesterol oxidase; ch 52.2 1E+02 0.0034 32.9 11.9 56 473-528 455-531 (540)
42 3s8s_A Histone-lysine N-methyl 24.6 1.2E+02 0.004 24.5 5.5 46 264-313 22-68 (110)
43 3ulh_A THO complex subunit 4; 20.6 1.4E+02 0.0049 23.2 5.2 46 264-313 45-90 (107)
44 2dnh_A Bruno-like 5, RNA bindi 20.4 1.6E+02 0.0054 22.9 5.4 46 264-313 31-76 (105)
No 1
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.3e-84 Score=694.81 Aligned_cols=454 Identities=39% Similarity=0.648 Sum_probs=413.5
Q ss_pred CCCHHHHHHHHHhhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCc
Q 009201 77 TLNSEDVSYFKELLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGS 153 (540)
Q Consensus 77 ~~~~~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~ 153 (540)
.++++++++|++++|+++|+++++.+..|++||+..+.+.|.+|++|+|++ +++++|+++++||+|+|||||+.|++
T Consensus 12 ~~~~~~~~~L~~~lg~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~ 91 (476)
T 3pm9_A 12 TLSPELIARFTAIVGDKHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQ 91 (476)
T ss_dssp CCCHHHHHHHHHHHCGGGEECSHHHHHHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTT
T ss_pred cCCHHHHHHHHHhcCCCcEecCHHHHHHHhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCc
Confidence 477889999999999999999999999999999888899999999999999 99999999999999999999999999
Q ss_pred ccCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccc
Q 009201 154 VPVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSL 233 (540)
Q Consensus 154 ~~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~ 233 (540)
++..+||+|||++||+|+++|+++.+++||||++|.+|+++|.++|+.+|++|++..++||||++++|+||+++.+||.+
T Consensus 92 ~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~ 171 (476)
T 3pm9_A 92 TPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLA 171 (476)
T ss_dssp CCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCH
T ss_pred cCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcH
Confidence 88777999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHHHHHHHH
Q 009201 234 HGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQKLLREA 313 (540)
Q Consensus 234 ~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+|+|+++++|++||++++++.+..|+++||||+++++||+|+|||||+++||++|.|+.....++.|++++++.+++.++
T Consensus 172 ~d~V~~levV~~dG~v~~~~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~ 251 (476)
T 3pm9_A 172 RDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIA 251 (476)
T ss_dssp HHHEEEEEEECTTSCEEECCCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHH
T ss_pred HHheeEEEEEccCCeEEEcCCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHH
Confidence 99999999999999999998888889999999999999999999999999999999998888899999999999999998
Q ss_pred HHHhcCccceeeeeChHHHHHHHHhhcCCCCCCCCCCcceEEEEEecCCChhHHHHHHHHHHHHHhhCCCcceeEEecCH
Q 009201 314 KRKLGEILSAFEFLDNQSMDLVLTYLEGVRNPFSSSMHNFYVLIETTGSEESYDREKLEAFLLSSMEGGLISDGVIAQDI 393 (540)
Q Consensus 314 ~~~~~~~~~a~e~~d~~~~~~~~~~~~~~~~p~~~~~~~~~llie~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 393 (540)
++..+..|+++|+||+.+++++..+ .+...|++.. .++++++|+.|.+ +..+++++.+++.+.+.+...+..++.++
T Consensus 252 ~~~~g~~p~a~El~d~~~~~~~~~~-~~~~~~~~~~-~~~~llve~~g~~-~~~~~~~~~~~~~~~~~g~~~~~~~a~~~ 328 (476)
T 3pm9_A 252 QGEAAGNLTSFELIAETPLDFSVRH-ANNRDPLEAR-YPWYVLIELSSPR-DDARAALESILERGFEDGIVVDAAIANSV 328 (476)
T ss_dssp HHHHGGGEEEEEEEEHHHHHHHHHH-TTCCCCSSSC-CSEEEEEEEEESS-SCHHHHHHHHHHHHHHTTCCCEEEECCSH
T ss_pred HHhcCCCceEEEecCHHHHHHHHhc-cCCCCCCCcc-CCeEEEEEEccCc-HHHHHHHHHHHHHHHhcCCCcceEEeCCH
Confidence 7766788999999999999988776 3445555432 4689999999877 44667778888888777766677888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceeeEEeecchhHHHHHHHHHHHHhhc--C-cEEEEeecCCCceeEeeccCCC-ChH-
Q 009201 394 NQASSFWRIREGIAEALMKAGAVYKYDLSLPVEKMYDLVEKMRQRLGET--A-KVIGYGHLGDGNLHLNISAPRY-DDM- 468 (540)
Q Consensus 394 ~~~~~lw~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~v~~~~~~l~~~--~-~~~~~gH~gdGnlh~~i~~~~~-~~~- 468 (540)
++.+++|+.|+.+.++....+..+.+|++||+++++++++++++.+.++ + ....|||+||||+|+++..+.. +++
T Consensus 329 ~~~~~lW~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~~~~~~~~~~~~~~~~~~~~~gH~gdGnlH~~i~~~~~~~~~~ 408 (476)
T 3pm9_A 329 QQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALIPGARPVPFGHLGDGNIHYNVSQPVGADKAE 408 (476)
T ss_dssp HHHHHHHHHHHTHHHHTGGGCCEECCEEECCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTEEEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCceeEEEEeeHHHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCCceEEEEecCCcCChHH
Confidence 9999999999999888777777788999999999999999999999988 5 5778999999999999987542 232
Q ss_pred ---HHHHHHHHHHHHHHhcCCeEEeecCCchhhhhhhhccCCHHHHHHHHHHhHhcCCCCCCCCCccc
Q 009201 469 ---IFAQIEPYVYEWTSEHRGSISAEHGLGLMKANKIFYSKSPKTVQLMSSIKKLLDPNGILNPYKVL 533 (540)
Q Consensus 469 ---~~~~~~~~v~~~~~~~gGsis~eHGiG~~k~~~l~~~~~~~~~~~m~~IK~~~DP~giLNPGk~~ 533 (540)
..+++.+.+++.+.++||++|+|||+|+.|++|+..+++++.+++|++||++|||+|||||||+|
T Consensus 409 ~~~~~~~~~~~~~~~~~~~gGsis~EHGiG~~k~~~l~~~~~~~~~~~m~~iK~~~DP~~ilNPGki~ 476 (476)
T 3pm9_A 409 FLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELAEVKDKTAIELMRSIKALLDPHGIMNPGKVV 476 (476)
T ss_dssp HHTTHHHHHHHHHHHHHHTTCBSCSSSCCTTTTHHHHHHHSCHHHHHHHHHHHHHHCTTSCBSTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCEEEEcccCchhHHHHHHHhcCHHHHHHHHHHHHHhCcccCCCCCCcC
Confidence 23456778899999999999999999999999999999999999999999999999999999986
No 2
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=4.9e-70 Score=609.71 Aligned_cols=447 Identities=19% Similarity=0.243 Sum_probs=356.0
Q ss_pred CCCHHHHHHHHHhhCCCceecCHHHHHHhhh-----h----hhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEc
Q 009201 77 TLNSEDVSYFKELLGEKSVIQDEDVLLAANE-----D----WMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQG 144 (540)
Q Consensus 77 ~~~~~~~~~l~~~~g~~~v~~~~~~l~~~~~-----d----~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~G 144 (540)
.++++++++|+++++. +.++.++...+++ | |...|+..|++||+|+|++ ++|++|+++++||+|+|
T Consensus 159 ~~~~~~~~~l~~~~~~--~~~~~~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprG 236 (658)
T 4bby_A 159 IVNEDFLHELKKTNIS--YSQEADDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIG 236 (658)
T ss_dssp CCCHHHHHHHHHHTCE--EECCHHHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCHHHHHHHHHhccc--ccCchHHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEEC
Confidence 4778899999999885 5667766555543 3 4456788899999999999 99999999999999999
Q ss_pred CCCCCCCCcccC----CCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccC
Q 009201 145 GNTGLVGGSVPV----FDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVST 220 (540)
Q Consensus 145 gGt~~~g~~~~~----~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~ 220 (540)
||||+.|++++. .++|+|||++||+|+++|+++++++||||+++.+|+++|+++|++||++|++...|||||+|++
T Consensus 237 gGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAt 316 (658)
T 4bby_A 237 GGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWIST 316 (658)
T ss_dssp SCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhc
Confidence 999999887652 3469999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccccccccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeec
Q 009201 221 NAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLAC 300 (540)
Q Consensus 221 na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~ 300 (540)
|++|.++.+||.++|+|+++|||++||++++.+ +..|+++||||+++|+||+|||||||+++|||+|.|+...+.++.|
T Consensus 317 na~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~-~~~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f 395 (658)
T 4bby_A 317 RASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSC-QGPRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAF 395 (658)
T ss_dssp TCCCTTHHHHCCHHHHEEEEEEEETTEEEECSC-CCSSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEE
T ss_pred CCCCCCccCcCCHHHheeeEEEEeCCCcccccc-cccccCCCcCHHHHhccCCCcCcceeeeeeeeccCCcccccccccc
Confidence 999999999999999999999999999988754 4568899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCccceeeeeChHHHHHHHHhhcCCCCCCC---CC--------------CcceEEEEEecCCC
Q 009201 301 KDYFSCQKLLREAKRKLGEILSAFEFLDNQSMDLVLTYLEGVRNPFS---SS--------------MHNFYVLIETTGSE 363 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~e~~d~~~~~~~~~~~~~~~~p~~---~~--------------~~~~~llie~~g~~ 363 (540)
++++++.+++.++.+ .+..|+++|+||+..++....+.+.....+. +. .....+.+.+.+..
T Consensus 396 ~d~~~a~~av~~i~~-~~~~psa~El~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~eg~~ 474 (658)
T 4bby_A 396 PNFEQGVACLREIAK-QRCAPASIRLMDNQQFQFGHALKPQVSSIFTSFLDGLKKFYITKFKGFDPNQLSVATLLFEGDR 474 (658)
T ss_dssp SSHHHHHHHHHHHHH-TTCCCSEEEEECHHHHHHHHHTSSCCCCTTCC--------------CCCTTTCEEEEEEEEECH
T ss_pred CCchhhhhhHHHHHH-cCCCccccccccHHHHHHHHhhcccccccccccccchhhhhhhhhccCChHHHHHHHHHhcccH
Confidence 999999999988865 3667899999999988877665432211110 00 01122233333332
Q ss_pred hhHHHHHHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHHHHHHHH--HH-hcC-CceeeEEeecchhHHHHHHHHHHHH
Q 009201 364 ESYDREKLEAFLLSSMEGGLISDGVIAQDINQASSFWRIREGIAEA--LM-KAG-AVYKYDLSLPVEKMYDLVEKMRQRL 439 (540)
Q Consensus 364 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~--~~-~~g-~~~~~Dv~vP~~~l~~~v~~~~~~l 439 (540)
+...+..+.+.+.+...+. +....+..+..|.+|...... .. ..+ ....+|+++|+++++++++.+.+.+
T Consensus 475 -~~v~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~avP~~~l~~~~~~v~~~l 548 (658)
T 4bby_A 475 -EKVLQHEKQVYDIAAKFGG-----LAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGESFETSAPWDRVVDLCRNVKERI 548 (658)
T ss_dssp -HHHHHHHHHHHHHHHTTTC-----EECCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEGGGHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhhCc-----chhhhhHHHHHHHHhhHHHHHHhhccccCCccceEEEEeeHHHHHHHHHHHHHHH
Confidence 2333444445444444332 333455556666665544332 11 122 2356899999999999999888776
Q ss_pred hhc----C------cEEEEeecCCCcee--EeeccCCC---Ch-HHHHHHHHHHHHHHHhcCCeEEeecCCchhhhhhhh
Q 009201 440 GET----A------KVIGYGHLGDGNLH--LNISAPRY---DD-MIFAQIEPYVYEWTSEHRGSISAEHGLGLMKANKIF 503 (540)
Q Consensus 440 ~~~----~------~~~~~gH~gdGnlh--~~i~~~~~---~~-~~~~~~~~~v~~~~~~~gGsis~eHGiG~~k~~~l~ 503 (540)
.+. + ....++|++|||.| +++..+.. ++ +.+++++..+++.+.++||+||+|||||+.|++|+.
T Consensus 549 ~~~~~~~g~~~~~~~~~~~~h~~dg~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~GGsiS~EHGIG~~k~~~l~ 628 (658)
T 4bby_A 549 RRECKEKGVQFPPLSTCRVTQTYDAGACIYFYFAFNYRGISDPLAVFEQTEAAAREEILANGGSLSHHHGVGKLRKQWLK 628 (658)
T ss_dssp HHHHHHTTCSSCCEEEEEEEEECSSEEEEEEEEEEECTTCSCHHHHHHHHHHHHHHHHHHTTCCSCSSSCCTTTSGGGHH
T ss_pred HHHHHhcCccccccceEEEEEEeccCceEEEEecCCcCCchhHHHHHHHHHHHHHHHHHHcCCeEEEcccchHHHHHHHH
Confidence 554 1 24568999999754 44443221 11 345677788999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhHhcCCCCCCCCCccc
Q 009201 504 YSKSPKTVQLMSSIKKLLDPNGILNPYKVL 533 (540)
Q Consensus 504 ~~~~~~~~~~m~~IK~~~DP~giLNPGk~~ 533 (540)
+++++..+++|++||++|||+|||||||++
T Consensus 629 ~~~g~~~l~lmr~IK~a~DP~gILNPGKll 658 (658)
T 4bby_A 629 ESISDVGFGMLKSVKDYVDPTNIFGNRNLL 658 (658)
T ss_dssp HHHCHHHHHHHHHHHHHHSTTCSSCSCCCC
T ss_pred HhcCHHHHHHHHHHHHHhCcccCCCCCCCC
Confidence 999999999999999999999999999986
No 3
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=100.00 E-value=2.7e-69 Score=593.91 Aligned_cols=445 Identities=17% Similarity=0.248 Sum_probs=344.2
Q ss_pred CCCHHHHHHHHHhh-CCCceecCHHHHHHhhh-----hhhh----ccCCCccEEEecCCHH---HHHHHhcCCCceEEEE
Q 009201 77 TLNSEDVSYFKELL-GEKSVIQDEDVLLAANE-----DWMR----KYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQ 143 (540)
Q Consensus 77 ~~~~~~~~~l~~~~-g~~~v~~~~~~l~~~~~-----d~~~----~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~ 143 (540)
.++++++++|++++ | ++|+++++.+..|.+ ||+. .+...|.+|++|+|++ ++|++|+++++||+|+
T Consensus 89 ~~~~~~~~~L~~~l~g-~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~ 167 (584)
T 2uuu_A 89 KQYPEFVRELKAFFLP-DQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPM 167 (584)
T ss_dssp CCCHHHHHHHHTTSCG-GGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCHHHHHHHHhhcCC-CeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 46778899999999 8 889999998887775 3332 2457899999999999 9999999999999999
Q ss_pred cCCCCCCCCcccC---CCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccC
Q 009201 144 GGNTGLVGGSVPV---FDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVST 220 (540)
Q Consensus 144 GgGt~~~g~~~~~---~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~ 220 (540)
|||||+.|++++. +++|+|||++||+|+++|+++.+++||||+++.+|+++|.++|+.+|++|++...+||||++++
T Consensus 168 GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~ 247 (584)
T 2uuu_A 168 GGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLAT 247 (584)
T ss_dssp SSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHH
T ss_pred eCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccC
Confidence 9999999988774 4679999999999999999999999999999999999999999999999988888999999999
Q ss_pred CCCCCCccccccccccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeec
Q 009201 221 NAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLAC 300 (540)
Q Consensus 221 na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~ 300 (540)
|++|..+.+||.++|+|++++||++||++++. ...++++||||+++++||+|+|||||+++||++|.|+......+.|
T Consensus 248 na~G~~~~~yG~~~d~V~~levVl~dG~i~~~--~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f 325 (584)
T 2uuu_A 248 CSSGHQSDKYGDIEDMAVSFRTVTPTGTLELR--NGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLF 325 (584)
T ss_dssp TCCCTTHHHHCCHHHHEEEEEEEETTEEECCC---------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEE
T ss_pred CCCcccccCcCcHHHheeeEEEEeCCCCEEEC--CccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEc
Confidence 99999999999999999999999999997642 2346789999999999999999999999999999999888888999
Q ss_pred CCHHHHHHHHHHHHHHhcCccceeeeeChHHHHHHHHhhcCC--C---------------CCCCCCCcceEEEEEecCCC
Q 009201 301 KDYFSCQKLLREAKRKLGEILSAFEFLDNQSMDLVLTYLEGV--R---------------NPFSSSMHNFYVLIETTGSE 363 (540)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~e~~d~~~~~~~~~~~~~~--~---------------~p~~~~~~~~~llie~~g~~ 363 (540)
++++++.+++.++.+ .+..|+++|+||+.++.+........ . .+++.. ..+++++|+.|..
T Consensus 326 ~~~~~a~~~~~~~~~-~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~llve~~g~~ 403 (584)
T 2uuu_A 326 PTFAHAVSALQQIRS-SEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYIRSFDFK-NVCLSIIGFEGPK 403 (584)
T ss_dssp SSHHHHHHHHHHHHH-HTCCCSEEEEECHHHHHHHHHTCCSCCCTTCCHHHHHHHHHHHTTTSCTT-TCEEEEEEEEECH
T ss_pred CCHHHHHHHHHHHHh-cCCCceEEEEechhHHHHHhhccCcccccchhhhhhHHHhhhhccCCCCC-ccEEEEEEEecCh
Confidence 999999999988865 46779999999998776543321100 0 122222 4578999999975
Q ss_pred hhHHHHHHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHHHHHHHHHHhc----CC-ceeeEEeecchhHHHHHHHHHHH
Q 009201 364 ESYDREKLEAFLLSSMEGGLISDGVIAQDINQASSFWRIREGIAEALMKA----GA-VYKYDLSLPVEKMYDLVEKMRQR 438 (540)
Q Consensus 364 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~~~~~----g~-~~~~Dv~vP~~~l~~~v~~~~~~ 438 (540)
+.++++++.+.+.+.+.+... .. ++...+|..|+...+++... +. ...+|++||+++++++++++++.
T Consensus 404 -~~v~~~~~~~~~~~~~~g~~~---~~---~~~~~lW~~r~~~~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~~~~ 476 (584)
T 2uuu_A 404 -KVVDFHRTSVFDILSKNAAFG---LG---SAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAKQT 476 (584)
T ss_dssp -HHHHHHHHHHHHHHHTTTCEE---EE---EESTTHHHHGGGGHHHHHHHHHTTTEEEEEEEEEEEHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHCCCcc---ch---HHHHHHHHHhhhchHHHHhhhcccCCccccceEEeeHHHHHHHHHHHHHH
Confidence 455677777777777666432 11 24567999888766654432 32 35689999999999999998887
Q ss_pred ----HhhcC-cEEEEe---ecCCC--ceeEeeccC---CCChHHHHHHHHHHHHHHHhcCCeEEeecCCchhhhhhhhcc
Q 009201 439 ----LGETA-KVIGYG---HLGDG--NLHLNISAP---RYDDMIFAQIEPYVYEWTSEHRGSISAEHGLGLMKANKIFYS 505 (540)
Q Consensus 439 ----l~~~~-~~~~~g---H~gdG--nlh~~i~~~---~~~~~~~~~~~~~v~~~~~~~gGsis~eHGiG~~k~~~l~~~ 505 (540)
+.+++ ....|| |+||+ ++|+++..+ ..+.+.++++.+.+++.+.++||++|+|||+|+.|++|+..+
T Consensus 477 l~~~~~~~g~~~~~~~h~gH~gd~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~gGsiS~EHGiG~~k~~~l~~~ 556 (584)
T 2uuu_A 477 FVKHFKDQGIPAWICAHISHTYTNGVCLYFIFASKQNENKDMAQYIEAKKLMTDIIFKYGGSLSHHHGVGYEHVPWMTRY 556 (584)
T ss_dssp HHHHHHTTTCCEEEEEEEEEEETTEEEEEEEEEEECCTTCCTHHHHHHHHHHHHHHHHTTCCCC----------------
T ss_pred HHhHHHhcCCeeEEEEEEEeecCCCcEEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCcEEecccCCcccHHHHHHh
Confidence 55555 444545 55665 345555432 222355677888999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhHhcCCCCCCCCCccc
Q 009201 506 KSPKTVQLMSSIKKLLDPNGILNPYKVL 533 (540)
Q Consensus 506 ~~~~~~~~m~~IK~~~DP~giLNPGk~~ 533 (540)
+++..+++|++||++|||+|||||||+|
T Consensus 557 ~g~~~~~lmr~iK~a~DP~gIlNPGki~ 584 (584)
T 2uuu_A 557 ATRGWINVYRSLKETIDPKDICNPRKLI 584 (584)
T ss_dssp --CTHHHHHHHHHHHHCTTCCBSCCCC-
T ss_pred cCHHHHHHHHHHHHHcCCCcCCCCCCCC
Confidence 9999999999999999999999999986
No 4
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=100.00 E-value=6.9e-68 Score=579.20 Aligned_cols=437 Identities=18% Similarity=0.229 Sum_probs=360.4
Q ss_pred HHHHHHHHHhhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccC
Q 009201 80 SEDVSYFKELLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPV 156 (540)
Q Consensus 80 ~~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~ 156 (540)
++++++|++++|+.+|.+++..+..|++||+ .+.+.|.+|++|+|++ ++|++|+++++||+|+||||++.|++++.
T Consensus 10 ~~~~~~L~~~~g~~~v~~~~~~~~~y~~d~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~ 88 (571)
T 1f0x_A 10 KAFLNELARLVGSSHLLTDPAKTARYRKGFR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPN 88 (571)
T ss_dssp HHHHHHHHHHHCGGGEECCHHHHHHHHBCSS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCC
T ss_pred HHHHHHHHHhcCCCeEEcCHHHHHHHhcccc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCC
Confidence 4578999999998899999999999999997 6789999999999999 99999999999999999999999998885
Q ss_pred CC-----cEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCC-CcceecccccCCCCCCCcccc
Q 009201 157 FD-----EVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAK-GSCQIGGNVSTNAGGLRLVRY 230 (540)
Q Consensus 157 ~~-----gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~-~~~tvGG~ia~na~G~~~~~y 230 (540)
.+ +|+|||++||+|+++|+ +++|+||||+++.+|+++|.++|+.+|++|++. ..+||||+|++|+||..+.+|
T Consensus 89 ~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~y 167 (571)
T 1f0x_A 89 GNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRG 167 (571)
T ss_dssp BSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSC
T ss_pred CcCCcCceEEEECcccCCceeECC-CCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCC
Confidence 53 89999999999999995 578999999999999999999999988888653 567999999999999999999
Q ss_pred ccccc----------------cEeEeEEEecCCcEEEccCCcc------------cCCCCC-----------------ch
Q 009201 231 GSLHG----------------NVLGLEAVLANGDVIDMLGTLR------------KDNTGY-----------------DL 265 (540)
Q Consensus 231 G~~~d----------------~V~~~~vV~~~G~v~~~~~~~~------------k~~~g~-----------------dL 265 (540)
|.++| +|+++++|++||++++++.... |+++|| ||
T Consensus 168 G~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl 247 (571)
T 1f0x_A 168 PAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADP 247 (571)
T ss_dssp SSCCSCEEEEEECTTSCEEEEECSSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCG
T ss_pred CchhhhhhhheeccCCceEEEEeeeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccH
Confidence 99999 9999999999999998775432 688999 99
Q ss_pred hhhh--hccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHHHHHHHHHHHhcCccceeeeeChHHHHHHHHh-----
Q 009201 266 KHLF--IGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQKLLREAKRKLGEILSAFEFLDNQSMDLVLTY----- 338 (540)
Q Consensus 266 ~~~~--~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~e~~d~~~~~~~~~~----- 338 (540)
+++| +||+|+||| |+++||++|.|+.....++.|++++++.+++.++++..+..|+++|+||+.+++++..+
T Consensus 248 ~~l~~a~GseGtlGV-t~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~a~E~~d~~~~~~~~~~~~~~~ 326 (571)
T 1f0x_A 248 DRLFESSGCAGKLAV-FAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTF 326 (571)
T ss_dssp GGCCSSTTCTTSSEE-EEEEEECEECCSSCEEEEEEESCHHHHHHHHHHHHHHCSSCCSEEEEEEHHHHHHHC-------
T ss_pred HHHHHhcCCCCceeE-EEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHhccccc
Confidence 9999 999999999 99999999999888888899999999999999887656778999999999988877554
Q ss_pred -----hcCCCC-----------------CC-C--------------------------CCCcceEEEEEecCCChhHHHH
Q 009201 339 -----LEGVRN-----------------PF-S--------------------------SSMHNFYVLIETTGSEESYDRE 369 (540)
Q Consensus 339 -----~~~~~~-----------------p~-~--------------------------~~~~~~~llie~~g~~~~~~~~ 369 (540)
...... |+ + ....++++++|+.|.+++...+
T Consensus 327 ~~i~~~~~~~~p~~~~~k~~~~~~~~~~p~l~~~~~~~~~~~~~~~~p~~~p~~~~~~~~~~~~~llve~~g~~~~~~~~ 406 (571)
T 1f0x_A 327 LMIDKLGTDKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHLLLKMAGDGVGEAKS 406 (571)
T ss_dssp --------------------------------------------------CCHHHHHHHHHCSEEEEEEECTTHHHHHHH
T ss_pred ccccccCcccccchhcccchhhhhhcccccccccchhhhhhhhhhccccccchhhhcccccCceEEEEEEecCcHHHHHH
Confidence 111111 11 0 0014578999999987766666
Q ss_pred HHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHHHHHHHHHHh--------cCCceeeEEeecchhHHHHHHHHHHHHhh
Q 009201 370 KLEAFLLSSMEGGLISDGVIAQDINQASSFWRIREGIAEALMK--------AGAVYKYDLSLPVEKMYDLVEKMRQRLGE 441 (540)
Q Consensus 370 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~~~~--------~g~~~~~Dv~vP~~~l~~~v~~~~~~l~~ 441 (540)
+++.+++.+ .+. ....+.++.+..|..|+....++.. .+..+.+|++||+++++++ +++.+.+.+
T Consensus 407 ~l~~~~~~~--~g~----~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~~~~~g~~~~~Dvavp~~~l~~~-~~~~~~l~~ 479 (571)
T 1f0x_A 407 WLVDYFKQA--EGD----FFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWY-EHLPPEIDS 479 (571)
T ss_dssp HHHHHHHHS--SCE----EEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEEEEEEEEEECCTTCSCCS-CCCCHHHHT
T ss_pred HHHHHHHHc--CCC----eeecCccHHHHHHHHhhhhhhHHHHhhhcchhhcCCceEEEEEecHHHhHHH-HHHHHHHHh
Confidence 666666554 121 2333667777778877766533221 1235789999999999999 999888887
Q ss_pred cC-cEEEEeecCCCceeEeeccCCCChHHHHHHHHHHHHHHHhcCCeEEeecCCchhhhhhhhccCCHHHHHHHHHHhHh
Q 009201 442 TA-KVIGYGHLGDGNLHLNISAPRYDDMIFAQIEPYVYEWTSEHRGSISAEHGLGLMKANKIFYSKSPKTVQLMSSIKKL 520 (540)
Q Consensus 442 ~~-~~~~~gH~gdGnlh~~i~~~~~~~~~~~~~~~~v~~~~~~~gGsis~eHGiG~~k~~~l~~~~~~~~~~~m~~IK~~ 520 (540)
++ ....|||+||||+|+++..+... + .+++++.+++++.++||++|+|||+|.. |. .+.. |++||++
T Consensus 480 ~~~~~~~~GH~g~g~~H~~~~~~~~~-~-~~~i~~~~~~~v~~~GGsisaEHGvG~~---~~----~~~~---m~~iK~~ 547 (571)
T 1f0x_A 480 QLVHKLYYGHFMCYVFHQDYIVKKGV-D-VHALKEQMLELLQQRGAQYPAEHNVGHL---YK----APET---LQKFYRE 547 (571)
T ss_dssp TEEEEEEEEETTTTEEEEEEEEETTC-C-HHHHHHHHHHHHHHTTCBSCSSSCCTTT---SC----CCHH---HHHHHHH
T ss_pred hCccceeEEEEcCCceEEeeecCCch-h-HHHHHHHHHHHHHHcCCeEEeeccCCcc---cC----CHHH---HHHHHHH
Confidence 65 45789999999999998874321 2 4567888999999999999999999986 21 1222 9999999
Q ss_pred cCCCCCCCCCcccCCCCC
Q 009201 521 LDPNGILNPYKVLPHSLS 538 (540)
Q Consensus 521 ~DP~giLNPGk~~~~~~~ 538 (540)
|||+|||||||++++..-
T Consensus 548 ~DP~~ilNPGk~~t~~~~ 565 (571)
T 1f0x_A 548 NDPTNSMNPGIGKTSKRK 565 (571)
T ss_dssp HCTTCCBSTTTTTCCCSS
T ss_pred hCCCCCCCCCcCcCCccc
Confidence 999999999999987643
No 5
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=100.00 E-value=6.1e-64 Score=551.16 Aligned_cols=441 Identities=18% Similarity=0.191 Sum_probs=349.4
Q ss_pred HHHHHHHHhhCCCceecCHHHHHH----hhhh------hhh--ccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcC
Q 009201 81 EDVSYFKELLGEKSVIQDEDVLLA----ANED------WMR--KYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGG 145 (540)
Q Consensus 81 ~~~~~l~~~~g~~~v~~~~~~l~~----~~~d------~~~--~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~Gg 145 (540)
.++++|++++|+++|++++..+.. |.+| |+. .+.+.|.+|++|+|++ ++|++|+++++||+|+|+
T Consensus 23 ~~~~~L~~~~g~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~ 102 (560)
T 1e8g_A 23 EFIQDIIRIVGSENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISI 102 (560)
T ss_dssp HHHHHHHHHHCGGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHHhhCcccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 467899999999999999999998 8877 554 4678899999999999 999999999999999999
Q ss_pred CCCCC-CCccc-CCCcEEEEe-CCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCc--ccccCCCCCcceecccccC
Q 009201 146 NTGLV-GGSVP-VFDEVIINM-GSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFI--MPLDLGAKGSCQIGGNVST 220 (540)
Q Consensus 146 Gt~~~-g~~~~-~~~gvvIdl-~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~--lp~~~~s~~~~tvGG~ia~ 220 (540)
|||+. |++.| ..+||+||| ++||+|+++|+++.+++||||+++.+|+++|.++|+. +|++|++.+.+||||++++
T Consensus 103 Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~ 182 (560)
T 1e8g_A 103 GRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVE 182 (560)
T ss_dssp CCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHT
T ss_pred CCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccC
Confidence 99997 77766 468999999 9999999999999999999999999999999999999 9988887778999999999
Q ss_pred CCCCCCccccccccccEeEeEEEecCCcEEEccCCcccC-------------------------CCCCchhhhhhccCCC
Q 009201 221 NAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKD-------------------------NTGYDLKHLFIGSEGS 275 (540)
Q Consensus 221 na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~-------------------------~~g~dL~~~~~Gs~G~ 275 (540)
|++|++ +||.++|+|++++||++||++++++....++ ..||||.++|. +|+
T Consensus 183 ~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~--~Gt 258 (560)
T 1e8g_A 183 RGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFS--QSN 258 (560)
T ss_dssp TCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGS--SSS
T ss_pred CCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccc--cCc
Confidence 999875 9999999999999999999999988654444 35889999986 579
Q ss_pred eeEEEEEEEEeccCCcceeEEEeecCCHHHHHHHHHHHHHH--hcCccceeeeeChHHHHHHH-----HhhcCCCCCCCC
Q 009201 276 LGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQKLLREAKRK--LGEILSAFEFLDNQSMDLVL-----TYLEGVRNPFSS 348 (540)
Q Consensus 276 lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~a~e~~d~~~~~~~~-----~~~~~~~~p~~~ 348 (540)
|||||+++||++|.|+.....++.|++++++.+++..+++. .+..|+++|+||... +++. .+. ....+++.
T Consensus 259 lGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~p~~~el~d~~~-~~~~l~~~~~~~-~~~~~~p~ 336 (560)
T 1e8g_A 259 MGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLRLGMALQNVPTIRHILL-DAAVLGDKRSYS-SRTEPLSD 336 (560)
T ss_dssp SEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHHHTTSSCSCCEEEEHHH-HHHHHCCGGGTC-CCSSCCCH
T ss_pred EEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHHHcCCCcceeEEechHH-Hhhhhhhhhhhc-cCCCCCCH
Confidence 99999999999999998888889999999987776554322 255789999999874 3221 111 10012221
Q ss_pred C----------CcceEEEEEecCCChhHHHHHHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHHHHHH---HHHHhc--
Q 009201 349 S----------MHNFYVLIETTGSEESYDREKLEAFLLSSMEGGLISDGVIAQDINQASSFWRIREGIA---EALMKA-- 413 (540)
Q Consensus 349 ~----------~~~~~llie~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~---~~~~~~-- 413 (540)
. ...+++++|+.|.. +.++++++.+.+.+.+.+. .....+.+.++.+.+|. |+.+. +++...
T Consensus 337 ~~~~~l~~~~~~~~~~l~~e~~g~~-~~v~~~~~~i~~i~~~~~~-~~~~~~~~~~e~~~~w~-R~~~~~~~p~~~~~~~ 413 (560)
T 1e8g_A 337 EELDKIAKQLNLGRWNFYGALYGPE-PIRRVLWETIKDAFSAIPG-VKFYFPEDTPENSVLRV-RDKTMQGIPTYDELKW 413 (560)
T ss_dssp HHHHHHHHHHTCCSEEEEEEEESCH-HHHHHHHHHHHHHHTTSTT-CEEECGGGSCTTCHHHH-HHHHTTTCCCCGGGGG
T ss_pred HHHHHHHhhcCCCceEEEEEEeCCH-HHHHHHHHHHHHHHHhCCC-ceeeccccchhhhhHHH-HHhhcccCchhhhhcc
Confidence 1 12468999999954 4556666666666655553 23334445555667886 87764 221211
Q ss_pred ------CCceeeEEeecc--hhHHHHHHHHHHHHhhcC-cEEEEeecCCCceeEeec--cCCCChHHHHHHHHHHHHHHH
Q 009201 414 ------GAVYKYDLSLPV--EKMYDLVEKMRQRLGETA-KVIGYGHLGDGNLHLNIS--APRYDDMIFAQIEPYVYEWTS 482 (540)
Q Consensus 414 ------g~~~~~Dv~vP~--~~l~~~v~~~~~~l~~~~-~~~~~gH~gdGnlh~~i~--~~~~~~~~~~~~~~~v~~~~~ 482 (540)
+..+.+|+++|+ ++++++++.+++.+.+++ ....+||+||||+|+++. .+..++++.++++..+.+++.
T Consensus 414 ~~~~~~~~~~~~d~~vP~~~~~l~~~~~~~~~~~~~~g~~~~~~gH~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~l~~ 493 (560)
T 1e8g_A 414 IDWLPNGAHLFFSPIAKVSGEDAMMQYAVTKKRCQEAGLDFIGTFTVGMREMHHIVCIVFNKKDLIQKRKVQWLMRTLID 493 (560)
T ss_dssp GGGSTTEEEEEECBEECSSHHHHHHHHHHHHHHHHHHTCCCCEEEEECSSCEEEEEEEEEETTCHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEeeecCCCHHHHHHHHHHHHHHHHHcCCceEEEEEecCCeEEEEecccCCCCCHHHHHHHHHHHHHHHH
Confidence 234568999999 999999999999998887 567899999999999983 544555666666666666655
Q ss_pred hcCCeEEeecCCchhhhh--hh---hccC---CHHHHHHHHHHhHhcCCCCCCCCCcccCC
Q 009201 483 EHRGSISAEHGLGLMKAN--KI---FYSK---SPKTVQLMSSIKKLLDPNGILNPYKVLPH 535 (540)
Q Consensus 483 ~~gGsis~eHGiG~~k~~--~l---~~~~---~~~~~~~m~~IK~~~DP~giLNPGk~~~~ 535 (540)
.. +|||+|..|++ |+ ..++ +++.+++|++||++|||+|||||||+++.
T Consensus 494 ~~-----~eHGiG~~k~~~~~l~~~~~~~~~~g~~~~~lm~~iK~~~DP~gILNPGk~~~~ 549 (560)
T 1e8g_A 494 DC-----AANGWGEYRTHLAFMDQIMETYNWNNSSFLRFNEVLKNAVDPNGIIAPGKSGVW 549 (560)
T ss_dssp HH-----HHTTCCBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHHHHCTTCCBCTTGGGCC
T ss_pred HH-----HHcCCcccccchhHHHHHHHHhccCCHHHHHHHHHHHHHcCccCCCCCCccccC
Confidence 43 59999999998 99 8888 88899999999999999999999999964
No 6
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=100.00 E-value=7e-62 Score=531.09 Aligned_cols=442 Identities=18% Similarity=0.185 Sum_probs=346.7
Q ss_pred HHHHHHHHhhCCCceecCHHHHHHhhhhhhhc--cCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCC-CCcc
Q 009201 81 EDVSYFKELLGEKSVIQDEDVLLAANEDWMRK--YRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLV-GGSV 154 (540)
Q Consensus 81 ~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~--~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~-g~~~ 154 (540)
.++++|++++|.+.|++++..+..|.+||+.. +.+.|.+|++|+|++ ++|++|+++++||+|+|+|||+. |++.
T Consensus 19 ~~~~~L~~~l~~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~ 98 (520)
T 1wvf_A 19 KAVQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAA 98 (520)
T ss_dssp HHHHHHHHHHCGGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTS
T ss_pred HHHHHHHHhcCCCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCC
Confidence 46789999999889999999999999998764 678899999999999 99999999999999999999997 7666
Q ss_pred c-CCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCccccc--CCCCCcceecccccCCCCCCCccccc
Q 009201 155 P-VFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLD--LGAKGSCQIGGNVSTNAGGLRLVRYG 231 (540)
Q Consensus 155 ~-~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~--~~s~~~~tvGG~ia~na~G~~~~~yG 231 (540)
+ ..+||+|||++||+|+++|+++.+++||||+++.+|+++|.++|+.+|++ |++ ..+||||++++|++|.. +||
T Consensus 99 ~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~-~~~~igG~~~~~g~g~~--~yG 175 (520)
T 1wvf_A 99 PVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPS-AIAGPVGNTMDRGVGYT--PYG 175 (520)
T ss_dssp CSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSC-TTCCHHHHHHTTCBCSS--TTC
T ss_pred CCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCC-CeeeeeecccCCCcCCc--ccc
Confidence 5 46799999999999999999999999999999999999999999999887 444 48999999999999875 999
Q ss_pred cccccEeEeEEEecCCcEEEccCCccc---------CCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCC
Q 009201 232 SLHGNVLGLEAVLANGDVIDMLGTLRK---------DNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKD 302 (540)
Q Consensus 232 ~~~d~V~~~~vV~~~G~v~~~~~~~~k---------~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~ 302 (540)
.++|+|++++||++||++++++....+ ...||||.++|.|+ +|||||+++||++|.|+.....++.|++
T Consensus 176 ~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~--~lGiVt~~~l~l~p~p~~~~~~~~~f~~ 253 (520)
T 1wvf_A 176 EHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQA--NYGICTKMGFWLMPKPPVFKPFEVIFED 253 (520)
T ss_dssp BGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTS--SSCEEEEEEEECEECCSEEEEEEEEECC
T ss_pred chhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCC--ceEEEEEEEEEEEecCCeEEEEEEEeCC
Confidence 999999999999999999998743222 24699999999754 9999999999999999887778888999
Q ss_pred HHHHHHHH---HHHHHHhcCccceeeeeChHHHHHHHHhh-c---CCCCCCCCC----------CcceEEEEEecCCChh
Q 009201 303 YFSCQKLL---REAKRKLGEILSAFEFLDNQSMDLVLTYL-E---GVRNPFSSS----------MHNFYVLIETTGSEES 365 (540)
Q Consensus 303 ~~~~~~~~---~~~~~~~~~~~~a~e~~d~~~~~~~~~~~-~---~~~~p~~~~----------~~~~~llie~~g~~~~ 365 (540)
++++.+++ .++.+ .+..|+++|+||+..+..+.... . .....++.. ...+.+++++.|.. +
T Consensus 254 ~~~~~~~~~~~~~~~~-~~~~p~a~El~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~-~ 331 (520)
T 1wvf_A 254 EADIVEIVDALRPLRM-SNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQ-E 331 (520)
T ss_dssp GGGHHHHHHHHHHHHH-TTSSCSCEEEEEHHHHHHHTTCCGGGTCCCSSSCCHHHHHHHHHHHCCCSEEEEEEEEESH-H
T ss_pred HHHHHHHHHHHHHHHH-cCCCccceEeccHHHHHHHhcccchhhccCCCCCCHHHHHHHHHhcCCCceEEEEEEeCCH-H
Confidence 88766644 44433 35568999999988665442200 0 000111110 02467888898865 4
Q ss_pred HHHHHHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHHHHHH---HHHHh--------cCCceeeEEeecc--hhHHHHH
Q 009201 366 YDREKLEAFLLSSMEGGLISDGVIAQDINQASSFWRIREGIA---EALMK--------AGAVYKYDLSLPV--EKMYDLV 432 (540)
Q Consensus 366 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~---~~~~~--------~g~~~~~Dv~vP~--~~l~~~v 432 (540)
..+++++.+.+.+.+.+.. ....+.+. +.+.+|..|+.+. ..... .+..+.+|+++|. +++++++
T Consensus 332 ~v~~~~~~i~~~~~~~~~~-~~~~~~~~-~~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vp~~~~~l~~~~ 409 (520)
T 1wvf_A 332 QVDVNWKIVTDVFKKLGKG-RIVTQEEA-GDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQA 409 (520)
T ss_dssp HHHHHHHHHHHHHHHHTCC-EEEEHHHH-TTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCe-EEEecccc-hhhhHHHHHHHhhccCchhhhhccccccCCCceEEeccccCCCHHHHHHHH
Confidence 4555566556555544432 22222222 4568999998765 21111 1234568999998 9999999
Q ss_pred HHHHHHHhhcC-cEEEEeecCCCceeEee--ccCCCChHHHHHHHHHHHHHHHhcCCeEEeecCCchhhh--hhh---hc
Q 009201 433 EKMRQRLGETA-KVIGYGHLGDGNLHLNI--SAPRYDDMIFAQIEPYVYEWTSEHRGSISAEHGLGLMKA--NKI---FY 504 (540)
Q Consensus 433 ~~~~~~l~~~~-~~~~~gH~gdGnlh~~i--~~~~~~~~~~~~~~~~v~~~~~~~gGsis~eHGiG~~k~--~~l---~~ 504 (540)
+.+++.+.+++ ....+||+||||+|+++ .++..+++..++++..+.+++.. +.|||+|..|. +|+ ..
T Consensus 410 ~~~~~~~~~~~~~~~~~gh~gdGnlH~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ehG~G~~k~~~~~~~~~~~ 484 (520)
T 1wvf_A 410 AMAKRVLHKYGLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDE-----FEKEGYAVYRVNTRFQDRVAQ 484 (520)
T ss_dssp HHHHHHHHHTTCCCCEEEEECSSEEEEEEEEEEETTCHHHHHHHHHHHHHHHHH-----HHHTTCCBSCCCGGGHHHHHH
T ss_pred HHHHHHHHHcCCCeeEeecccCcceeeeeccccCCCCHHHHHHHHHHHHHHHHH-----HHHcCCCccccChhHhhhhhh
Confidence 99999998887 56789999999999987 44434445555666666665554 36899999874 577 88
Q ss_pred cCCHHHHHHHHHHhHhcCCCCCCCCCcccCCC
Q 009201 505 SKSPKTVQLMSSIKKLLDPNGILNPYKVLPHS 536 (540)
Q Consensus 505 ~~~~~~~~~m~~IK~~~DP~giLNPGk~~~~~ 536 (540)
+++++.+++|++||++|||+|||||||+++++
T Consensus 485 ~~g~~~~~lmr~IK~a~DP~~IlNPGki~~~~ 516 (520)
T 1wvf_A 485 SYGPVKRKLEHAIKRAVDPNNILAPGRSGIDL 516 (520)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCCBCTTGGGCCT
T ss_pred hcCHHHHHHHHHHHHHcCCCCCCCCCcCCCCc
Confidence 99999999999999999999999999999765
No 7
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=2.6e-58 Score=502.42 Aligned_cols=420 Identities=14% Similarity=0.156 Sum_probs=309.0
Q ss_pred CCHHHHHHHHHhhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcC-CCceEEEEcCCCCCCCCc
Q 009201 78 LNSEDVSYFKELLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNS-RLLAVVPQGGNTGLVGGS 153 (540)
Q Consensus 78 ~~~~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~-~~~~v~~~GgGt~~~g~~ 153 (540)
+.+.++++|+ + +.+|++|+..+..|++||+..+.+.|.+|++|+|++ ++|++|++ +++||+|+|||||+.|++
T Consensus 26 ~~~~~~~~l~--~-~~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~ 102 (524)
T 2exr_A 26 STDGVSESLN--I-QGEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQA 102 (524)
T ss_dssp --------CC--C-SSEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTT
T ss_pred cHHHHHHhcC--C-CCeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcc
Confidence 3345666776 3 578999999999999999888899999999999999 99999994 999999999999999988
Q ss_pred ccCCCcEEEEeCCCCCeEEeeC-----CC--cEEEEcCCccHHHH-HHHHHhcCCcccccCCCCCcceecccccCCCCCC
Q 009201 154 VPVFDEVIINMGSMNNIITFDK-----GS--GVLVCEAGCILENL-VSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGL 225 (540)
Q Consensus 154 ~~~~~gvvIdl~~ln~i~~id~-----~~--~~v~v~aGv~~~~l-~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~ 225 (540)
.+. +||+|||++||+| ++|+ ++ .+++||||+++.++ ++.++++|+. |.++++...+||||++++|++|.
T Consensus 103 ~~~-~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G~ 179 (524)
T 2exr_A 103 MAE-GGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVSG 179 (524)
T ss_dssp CCT-TSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCCT
T ss_pred cCC-CEEEEECcCCCCc-EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCcc
Confidence 764 7999999999999 7776 55 79999999999997 5556699999 77888888899999999999899
Q ss_pred CccccccccccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHH
Q 009201 226 RLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFS 305 (540)
Q Consensus 226 ~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~ 305 (540)
.+.+||.++|+|+++++|++||++++++.. .++||+++++||+|+|||||+++||++|.|+......+.|+++++
T Consensus 180 ~~~~yG~~~d~V~~l~vV~~dG~v~~~~~~-----~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~ 254 (524)
T 2exr_A 180 QAFRYGPQTSNVTELDVVTGNGDVVTCSEI-----ENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDE 254 (524)
T ss_dssp THHHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHH
T ss_pred cccccCcHhhhEEEEEEEecCCeEEEECCC-----CChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHH
Confidence 999999999999999999999999998753 568999999999999999999999999999988888889999999
Q ss_pred HHHHHHHHHHHhcCccceeeeeChHHHHHHHHh---hcCC---------CCCCCCCCcceEEEEEe-----cCCChhHHH
Q 009201 306 CQKLLREAKRKLGEILSAFEFLDNQSMDLVLTY---LEGV---------RNPFSSSMHNFYVLIET-----TGSEESYDR 368 (540)
Q Consensus 306 ~~~~~~~~~~~~~~~~~a~e~~d~~~~~~~~~~---~~~~---------~~p~~~~~~~~~llie~-----~g~~~~~~~ 368 (540)
+.+++..+.+. +.. +++|+||...+...... .... ...++.....+++++|+ .|.+.+.++
T Consensus 255 ~~~~~~~l~~~-~~~-~~~e~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~llve~~~~~~~g~~~~~v~ 332 (524)
T 2exr_A 255 FTQDAEWLVSQ-KNE-SSFDYVEGFVFVNGADPVNGWPTVPLHPDHEFDPTRLPQSCGSVLYCLELGLHYRDSDSNSTID 332 (524)
T ss_dssp HHHHHHHHHTS-CTT-SSCSEEEEEEEESSCCTTTSGGGSCSSTTSCCCGGGSCTTCCSEEEEEEEEEEECTTSCHHHHH
T ss_pred HHHHHHHHHHc-CCc-chhHhhchhhhhcchhhhhhhhhcccccccccchhcCCcccccEEEEEEEEeecCCCCCHHHHH
Confidence 98888777542 333 57888886432211000 0000 01122101347789999 787777777
Q ss_pred HHHHHHHHHHhhCCCcceeE------EecCHHHHHHHHHHHHHHHHHHHhcCCceeeEEeecchhHHHHHHHHHHHHhhc
Q 009201 369 EKLEAFLLSSMEGGLISDGV------IAQDINQASSFWRIREGIAEALMKAGAVYKYDLSLPVEKMYDLVEKMRQRLGET 442 (540)
Q Consensus 369 ~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~lw~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~v~~~~~~l~~~ 442 (540)
++++.+.+.+.+.+...... ++.+..+ ..|+.|+....+... . ..|++||+++++++++.+.+
T Consensus 333 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~W~~R~~~~~a~~~---~-~~Dv~VP~s~l~~~~~~v~~----- 401 (524)
T 2exr_A 333 KRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKR--SEEIAKENGTWETPH---P-WLNLFVSKRDIGDFNRTVFK----- 401 (524)
T ss_dssp HHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHH--HHHHHHHTTCSSSCC---C-CEEEEEEHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHhCCCeEeecccchhhhhhhhhh--HHHHhhhhcccccCC---C-eeEEEECHHHHHHHHHHHHH-----
Confidence 77888777665554321110 1222222 239998865432221 1 35999999999999987744
Q ss_pred CcEEEEeecCCCceeEeeccCCCCh--------------------------------HHHHH---HHHHHHHHHHhcC--
Q 009201 443 AKVIGYGHLGDGNLHLNISAPRYDD--------------------------------MIFAQ---IEPYVYEWTSEHR-- 485 (540)
Q Consensus 443 ~~~~~~gH~gdGnlh~~i~~~~~~~--------------------------------~~~~~---~~~~v~~~~~~~g-- 485 (540)
+|+||||+|++++.+..++ ..+++ ....+.+.+...|
T Consensus 402 ------~~~gdgn~h~~i~~~~~~~~~~~r~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~ 475 (524)
T 2exr_A 402 ------ELVKNGVNGPMLVYPLLRSRWDDRTSVVIPEEGEIFYIVALLRFVPPCAKVSSVEKMVAQNQEIVHWCVKNGID 475 (524)
T ss_dssp ------CCTTTCCSSCEEEEEEEGGGSCTTSSCCCCSSCSEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ------HHhCCCCcceEEEEeCCchHHHhHHHhhCCCCccEEEEEEEeccCCCcccchHHHHHHHHHHHHHHHHHHcCCc
Confidence 7899999998877521110 11111 1123344444444
Q ss_pred --CeEEeecCCchhhhhhhhccCCHHHHHHHHHHhHhcCCCCCCCCCccc
Q 009201 486 --GSISAEHGLGLMKANKIFYSKSPKTVQLMSSIKKLLDPNGILNPYKVL 533 (540)
Q Consensus 486 --Gsis~eHGiG~~k~~~l~~~~~~~~~~~m~~IK~~~DP~giLNPGk~~ 533 (540)
++++++|+ +.+| ..++|+ .+++|++||++|||+|||||||++
T Consensus 476 ~~~yl~~~~~----~~~w-~~~~G~-~~~~m~~iK~~~DP~~iLnPG~~i 519 (524)
T 2exr_A 476 YKLYLPHYKS----QEEW-IRHFGN-RWSRFVDRKAMFDPMAILSPGQKI 519 (524)
T ss_dssp EEESSCCCCS----HHHH-HHHHGG-GHHHHHHHHHHHCTTCCBCGGGCS
T ss_pred cEEeecCCCC----HHHH-HHHhhh-HHHHHHHHHhhcCchhhcCCCCcc
Confidence 33555554 2333 234443 688999999999999999999944
No 8
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=6.2e-55 Score=477.72 Aligned_cols=439 Identities=12% Similarity=0.122 Sum_probs=320.7
Q ss_pred CCHHHHHHHHHhhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcC--C-CceEEEEcCCCCCCC
Q 009201 78 LNSEDVSYFKELLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNS--R-LLAVVPQGGNTGLVG 151 (540)
Q Consensus 78 ~~~~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~--~-~~~v~~~GgGt~~~g 151 (540)
.+..++++|+++..+.+|++++..+..|.+||+..+.+.|.+|++|+|++ ++|++|++ + ++||+|+|||||+.|
T Consensus 30 ~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g 109 (534)
T 1w1o_A 30 RGRPWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMG 109 (534)
T ss_dssp ----------CTTTTTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSS
T ss_pred chHHHHHHHHhcCCCceEecCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCC
Confidence 34466788999666788999999999999999888899999999999999 99999986 6 999999999999998
Q ss_pred CcccCCCcEEEEeCCCCCe-----EEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCC
Q 009201 152 GSVPVFDEVIINMGSMNNI-----ITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLR 226 (540)
Q Consensus 152 ~~~~~~~gvvIdl~~ln~i-----~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~ 226 (540)
++.+ .+|++|||++||+| +++|+++.+++||||++|.+|++++.++|++ |.++++...+||||++++|++|..
T Consensus 110 ~~~~-~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~-~~~~~~~~~~tvGG~v~~~g~g~~ 187 (534)
T 1w1o_A 110 QAFA-PGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVA-PRSWTDYLYLTVGGTLSNAGISGQ 187 (534)
T ss_dssp TTCC-TTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEE-ESCCCSSCCSBHHHHHTTCCCSTT
T ss_pred CcCC-CCeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCc-ccCCCCCCCEEeceeccCCCcccc
Confidence 8876 47999999999998 7999988999999999999999999999996 777888788999999999999999
Q ss_pred ccccccccccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHH
Q 009201 227 LVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSC 306 (540)
Q Consensus 227 ~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~ 306 (540)
+.+||.++|+|+++|||++||++++++.. .++||+|+++||+|+|||||+++||++|.|+......+.|++++++
T Consensus 188 ~~~yG~~~d~v~~~evV~~dG~v~~~~~~-----~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~ 262 (534)
T 1w1o_A 188 AFRHGPQISNVLEMDVITGHGEMVTCSKQ-----LNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAF 262 (534)
T ss_dssp HHHHCCGGGSEEEEEEEETTSCEEEEESS-----SSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHH
T ss_pred ccccccHhhhEEEEEEEeCCccEEEECCC-----CChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHH
Confidence 99999999999999999999999998754 5689999999999999999999999999998877777889999888
Q ss_pred HHHHHHHHHHhcC-----ccceeeeeChHHHH---HHHHhhcCC-CC---------CCCCCC-cceEEEEEec----CCC
Q 009201 307 QKLLREAKRKLGE-----ILSAFEFLDNQSMD---LVLTYLEGV-RN---------PFSSSM-HNFYVLIETT----GSE 363 (540)
Q Consensus 307 ~~~~~~~~~~~~~-----~~~a~e~~d~~~~~---~~~~~~~~~-~~---------p~~~~~-~~~~llie~~----g~~ 363 (540)
.+++..+... +. .++++|+||...+. .+..+ ... .. +++... .++++++|+. +.+
T Consensus 263 ~~~~~~~~~~-~~~~~~~~~~~~e~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ie~~~~~~g~~ 340 (534)
T 1w1o_A 263 SADQERLTAP-RPGGGGASFGPMSYVEGSVFVNQSLATDL-ANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNAT 340 (534)
T ss_dssp HHHHHHHHCB-C------CBCSCSEEEEEEEEGGGHHHHH-HTTSSSCHHHHHHHHHHHHHTTCSEEEEEEEEEEC----
T ss_pred HHHHHHHHhc-ccccccccccchhHhhhhhhccccccccc-ccccccCccccccccccccccccceEEEEEEEEecCCCc
Confidence 8877666432 33 46789999865432 12222 122 11 011000 2467888875 654
Q ss_pred h--hHHHHHHHHHHHHHhhCCCcceeEEe---c-CHHHHHHHHHHHHHHHHHHHhcCCceeeEEeecchhHHHHHHHHHH
Q 009201 364 E--SYDREKLEAFLLSSMEGGLISDGVIA---Q-DINQASSFWRIREGIAEALMKAGAVYKYDLSLPVEKMYDLVEKMRQ 437 (540)
Q Consensus 364 ~--~~~~~~l~~~~~~~~~~~~~~~~~~~---~-~~~~~~~lw~~R~~~~~~~~~~g~~~~~Dv~vP~~~l~~~v~~~~~ 437 (540)
. +..++.++.+++.+.+.+........ . ........|..|+...... +..+. |++||+++++++++++.+
T Consensus 341 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~~~~~~~~~~~w~~r~~~~~~~---~~~~~-d~~vP~s~l~~~~~~~~~ 416 (534)
T 1w1o_A 341 AAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRV---PHPWL-NMFVPRSRIADFDRGVFK 416 (534)
T ss_dssp ---CHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTHHHHHHHHHHHTTCSSS---CCCCE-EEEEEGGGHHHHHHHHTT
T ss_pred cchhhhHHHHHHHHHhhcccCCcceeccchHHHHhhhhhhhHHHHhhcccccc---CCccc-cEEecHHHHHhHHHHHHH
Confidence 4 45566677777665444431111011 0 0111235688776532211 11244 999999999999988876
Q ss_pred HHhhcC----cEE---EEee---------cCCCceeEeeccCCC--ChHH---HHHHHHHHHHHHHhc----CCeEEeec
Q 009201 438 RLGETA----KVI---GYGH---------LGDGNLHLNISAPRY--DDMI---FAQIEPYVYEWTSEH----RGSISAEH 492 (540)
Q Consensus 438 ~l~~~~----~~~---~~gH---------~gdGnlh~~i~~~~~--~~~~---~~~~~~~v~~~~~~~----gGsis~eH 492 (540)
.+.+.. ... .+|| .+|||+|+++..... +++. .++....+.+.+.+. ++.+..+|
T Consensus 417 ~l~~~~~~~~~~~~~~~~gh~~~~~~s~v~~dgn~h~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~yl~~~~ 496 (534)
T 1w1o_A 417 GILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHT 496 (534)
T ss_dssp TTTTTSCCCSCEEEEEEEGGGSCTTSSCCCCSSSEEEEEEECCCC---CHHHHHHHHHHHHHHHHHHTTCCCEESSCCCS
T ss_pred HHhhccCCcccEEEeecccccccccccccCCCccEEEEEEEecCCCCcchHHHHHHHHHHHHHHHHHhCCCcEEECCCCC
Confidence 444432 121 2377 689999998876432 2221 233444555555554 34556666
Q ss_pred CCchhhhhhhhccCCHHHHHHHHHHhHhcCCCCCCCCCc-ccC
Q 009201 493 GLGLMKANKIFYSKSPKTVQLMSSIKKLLDPNGILNPYK-VLP 534 (540)
Q Consensus 493 GiG~~k~~~l~~~~~~~~~~~m~~IK~~~DP~giLNPGk-~~~ 534 (540)
. +.+|. .+||++.|+.|++||++|||+||||||| +|+
T Consensus 497 ~----~~~w~-~~~G~~~~~~l~~iK~~~DP~~ilnpgk~I~~ 534 (534)
T 1w1o_A 497 D----RSDWV-RHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN 534 (534)
T ss_dssp S----HHHHH-HHHCHHHHHHHHHHHHHHCTTCCBCGGGCSCC
T ss_pred C----hHHHH-HHhCHHHHHHHHHHHHhcCchhhcCCCCcCCC
Confidence 2 56774 5789878999999999999999999999 653
No 9
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=9.4e-41 Score=355.50 Aligned_cols=378 Identities=14% Similarity=0.142 Sum_probs=269.1
Q ss_pred hhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEeeCCCcEEEE
Q 009201 106 NEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITFDKGSGVLVC 182 (540)
Q Consensus 106 ~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~id~~~~~v~v 182 (540)
.++|+..+...|.+|++|+|++ ++|++| +|++++||||++.+.+.+..+|++|||++||+|+++|+++++|+|
T Consensus 10 ~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v 85 (422)
T 2vfr_A 10 VTNWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRV 85 (422)
T ss_dssp CBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEE
T ss_pred eecCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEE
Confidence 3578888999999999999999 778887 799999999999888765457999999999999899999999999
Q ss_pred cCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCcEEEccCCcccCCCC
Q 009201 183 EAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNTG 262 (540)
Q Consensus 183 ~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g 262 (540)
|||+++.+|+++|.++|+.+| ++++.+.+||||++++|++|.+ .+||.++|+|+++++|++||++++++++ ++
T Consensus 86 ~aG~~l~~l~~~l~~~Gl~l~-~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~---~~-- 158 (422)
T 2vfr_A 86 GGGVRYAELARVVHARGLALP-NMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARG---DE-- 158 (422)
T ss_dssp ETTCBHHHHHHHHHHTTEECS-CCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETT---ST--
T ss_pred cCCCCHHHHHHHHHHcCCccc-CCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCC---CC--
Confidence 999999999999999999986 6777778899999999999986 6999999999999999999999998864 22
Q ss_pred CchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHH-HHHHHHHHHhcCccceeeeeChHHHHHHHH-hhc
Q 009201 263 YDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQ-KLLREAKRKLGEILSAFEFLDNQSMDLVLT-YLE 340 (540)
Q Consensus 263 ~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~e~~d~~~~~~~~~-~~~ 340 (540)
. +++++||+|++||||+++||+.|.|+.....+. +.+++++. +++.++. ..+.++|+++ ..++.... ...
T Consensus 159 -~-f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~e~~~-~~~~~~~~~~~~ 230 (422)
T 2vfr_A 159 -R-FGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFT-ELPLAGLDPATFETVM----AAAYSVSLFT-DWRAPGFRQVWL 230 (422)
T ss_dssp -T-GGGTSSCTTTTCEEEEEEEECEECCEEEEEEEE-EECSTTCCHHHHHHHH----TSSSEEEEEE-CSSSSSEEEEEE
T ss_pred -C-cceEEecCCCCEEEEEEEEEEEecCceEEEEEe-cCCHHHHHHHHHHHHH----hcCCcEEEEe-cCCCceeEEEEe
Confidence 2 699999999999999999999999986655543 66888887 7776664 3457888887 54332100 000
Q ss_pred CCCCCCCCCCc-ceEEEEEecCCChhHHHHHHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHHHHHHHHHHhc------
Q 009201 341 GVRNPFSSSMH-NFYVLIETTGSEESYDREKLEAFLLSSMEGGLISDGVIAQDINQASSFWRIREGIAEALMKA------ 413 (540)
Q Consensus 341 ~~~~p~~~~~~-~~~llie~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R~~~~~~~~~~------ 413 (540)
....+.+.. . .+ .+..... ...........+.. ....-..|..+.. . ...
T Consensus 231 ~~~~~~~~~-~~~~---~~~~~~~--------------~~~~p~~~~~~~~~-~~~~~~~~~~~~~---~-~~~~~~p~~ 287 (422)
T 2vfr_A 231 KRRTDRPLD-GFPY---AAPAAEK--------------MHPVPGMPAVNCTE-QFGVPGPWHERLP---H-FRAEFTPSS 287 (422)
T ss_dssp EEETTSCCC-CCTT---SEECSSC--------------CCSSTTSCGGGBCC-CTTCCEEGGGTSS---S-BCTTCCCSC
T ss_pred cCcCCCCCC-CchH---HHHHHhh--------------cccCcccChhhhcc-cCCccccHHHhcc---c-ccccccCCc
Confidence 000000000 0 11 0100000 00000000000000 0000011211100 0 001
Q ss_pred CCceeeEEeecchhHHHHHHHHHHHHhh-cCc----EEEEeecCCCceeE-------eeccCC-CChHHHHHHHHHHHHH
Q 009201 414 GAVYKYDLSLPVEKMYDLVEKMRQRLGE-TAK----VIGYGHLGDGNLHL-------NISAPR-YDDMIFAQIEPYVYEW 480 (540)
Q Consensus 414 g~~~~~Dv~vP~~~l~~~v~~~~~~l~~-~~~----~~~~gH~gdGnlh~-------~i~~~~-~~~~~~~~~~~~v~~~ 480 (540)
...+.+|++||+++++++++++++.+++ ... ...|+|.++|.+|+ .+.... .+.+..+.+.+.+.++
T Consensus 288 ~~~~~~e~avP~e~~~~~l~~l~~~~~~~~~~~~~v~~r~~~~~~~~Ls~~~~r~~~~l~~~~~~~~~~~~~~~~~~~~l 367 (422)
T 2vfr_A 288 GAELQSEYLMPREHALAALHAMDAIRETLAPVLQTCEIRTVAADAQWLSPAYGRDTVAAHFTWVEDTAAVLPVVRRLEEA 367 (422)
T ss_dssp CSCEEEEEEEEGGGHHHHHHHHHHTHHHHGGGEEEEEEEEECCBCSTTCTTBTSCEEEEEEEECSCHHHHHHHHHHHHHH
T ss_pred ccEEEEEEEEEHHHHHHHHHHHHHHHHhCCCceeeEEEEeecCCccccCCCCCCCeEEEEEecCCCchhHHHHHHHHHHH
Confidence 2345679999999999999999998876 221 25599999997776 222211 1123334566677888
Q ss_pred HHhcCCeEE-eecCCchhhhhhhhccCCHHHHHHHHHHhHhcCCCCCCCC
Q 009201 481 TSEHRGSIS-AEHGLGLMKANKIFYSKSPKTVQLMSSIKKLLDPNGILNP 529 (540)
Q Consensus 481 ~~~~gGsis-~eHGiG~~k~~~l~~~~~~~~~~~m~~IK~~~DP~giLNP 529 (540)
+.++||+++ ++++ ....+++...|+ .++.|+++|+.|||+|+||.
T Consensus 368 v~~~gG~~~wgk~~--~~~~~~~~~~Yp--~~~~f~~vk~~~DP~g~f~n 413 (422)
T 2vfr_A 368 LVPFAARPHWGKVF--TVPAGELRALYP--RLADFGALAGALDPAGKFTN 413 (422)
T ss_dssp HGGGTCEECTTSCC--CCCHHHHHTTCT--THHHHHHHHHHHCTTCTTCC
T ss_pred HHHcCCcccccccC--CCCHHHHHHHCc--CHHHHHHHHHHhCCCCccCC
Confidence 999999997 7654 456788888886 69999999999999999985
No 10
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=1.7e-36 Score=329.24 Aligned_cols=229 Identities=16% Similarity=0.199 Sum_probs=190.8
Q ss_pred CHHHHHHHHHhhCCCceecCHH-----HHHHhh--hhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCC
Q 009201 79 NSEDVSYFKELLGEKSVIQDED-----VLLAAN--EDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTG 148 (540)
Q Consensus 79 ~~~~~~~l~~~~g~~~v~~~~~-----~l~~~~--~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~ 148 (540)
.+++++.|.+.++++.|.+..+ .+..|. ..|+......|.+||+|+|++ ++|++|+++++||++|||||+
T Consensus 8 ~~~f~~~L~~~~~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh~ 87 (500)
T 3tsh_A 8 KEDFLGCLVKEIPPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHD 87 (500)
T ss_dssp -CHHHHHHHHHSCGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCC
T ss_pred HHHHHHHHHhhCCCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcC
Confidence 4567899999998877776532 233332 348777788999999999999 999999999999999999999
Q ss_pred CCCCc---ccCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCC
Q 009201 149 LVGGS---VPVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGL 225 (540)
Q Consensus 149 ~~g~~---~~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~ 225 (540)
+.|.+ .+.+++++|||++||+| ++|+++++++||||++|.+|+++|.++|+.+++.+|++..+++||+++++++|.
T Consensus 88 ~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~ 166 (500)
T 3tsh_A 88 YEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGM 166 (500)
T ss_dssp TTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCT
T ss_pred CCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCc
Confidence 87654 23467899999999998 899999999999999999999999999988887789999999999999999999
Q ss_pred CccccccccccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhh-ccCCCeeEEEEEEEEeccCCcceeEEEeecCCHH
Q 009201 226 RLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFI-GSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYF 304 (540)
Q Consensus 226 ~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~-Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~ 304 (540)
.+.+||.++|+|+++|||++||+++... ..+.||+|+++ |++|+|||||+++||++|.|+......+.+...+
T Consensus 167 ~~~~~G~~~d~v~~~~vV~a~G~i~~~~------~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 167 LLRKYGIAAENVIDVKLVDANGKLHDKK------SMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp THHHHCCGGGGEEEEEEECTTSCEECHH------HHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred cccccCChhhheeeEEEECCCceEEECC------CCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 9999999999999999999999987543 23459999999 5567999999999999999986655555544445
Q ss_pred HHHHHHHHHH
Q 009201 305 SCQKLLREAK 314 (540)
Q Consensus 305 ~~~~~~~~~~ 314 (540)
.+.+++..++
T Consensus 241 ~~~~~~~~~~ 250 (500)
T 3tsh_A 241 GAVDIINKWQ 250 (500)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 11
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=6.5e-36 Score=321.88 Aligned_cols=402 Identities=14% Similarity=0.167 Sum_probs=259.3
Q ss_pred hhhhhhhccCCCccEEEecCCHH---HHHHHhcCC--CceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEeeCCCcE
Q 009201 105 ANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSR--LLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITFDKGSGV 179 (540)
Q Consensus 105 ~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~--~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~id~~~~~ 179 (540)
+.++|. ++.+.|.+|++|+|++ ++|++|+++ ++||+++|+|||+.+.+.+ .+|++|||++||+|+++|+++++
T Consensus 32 ~~~~W~-~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 32 RLTGWG-RTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GGGLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp EECCTT-CCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TTSEEEECTTCCCEEEEETTTTE
T ss_pred eeeccc-CCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cCeEEEECccCCCceEEcCCCCE
Confidence 567885 5789999999999999 899999998 7999999999999776543 57999999999999999999999
Q ss_pred EEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCcEEEccCCcccC
Q 009201 180 LVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKD 259 (540)
Q Consensus 180 v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~ 259 (540)
|+||||+++.+|.++|.++|+++|..|+. ..+||||+|++|+||.++.+||.++|+|+++++|++||++++++.+
T Consensus 110 v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~---- 184 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPT---- 184 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSS----
T ss_pred EEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCC----
Confidence 99999999999999999999999987876 4679999999999999989999999999999999999999998753
Q ss_pred CCCCchhhhhhccCCCeeEEEEEEEEeccCCc-ceeEEEeecCCHHHHHHHHHHHHHHhcCccceeeeeChHHHH-----
Q 009201 260 NTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLS-SVNLAFLACKDYFSCQKLLREAKRKLGEILSAFEFLDNQSMD----- 333 (540)
Q Consensus 260 ~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~e~~d~~~~~----- 333 (540)
..++||+++++||.|++||||+++||+.|.|+ ......+.+.+++++++.+.+... ......+.++|..+-.
T Consensus 185 ~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~w~d~~~~~~~~~r 262 (481)
T 4feh_A 185 GEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSE--ARYTYSSAWFDAISAPPKLGR 262 (481)
T ss_dssp STTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGG--GGCSEEEEEECCSSCTTSTTC
T ss_pred CCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHh--cCCcEEEEEEeccCCCCCCCe
Confidence 15679999999999999999999999999884 445557788999998888764321 1122344455421000
Q ss_pred H---HHHh-----hc--CCCCCCCCCCcceEEEEEecCCChhHHHHHHHHHHHHHhhCCCcceeEEecCHHHHHHHHHHH
Q 009201 334 L---VLTY-----LE--GVRNPFSSSMHNFYVLIETTGSEESYDREKLEAFLLSSMEGGLISDGVIAQDINQASSFWRIR 403 (540)
Q Consensus 334 ~---~~~~-----~~--~~~~p~~~~~~~~~llie~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~R 403 (540)
. ...+ .+ ....|+... ....+.+...-.........+..+.+............+. ....++...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vp~~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~ 337 (481)
T 4feh_A 263 AAVSRGRLATVEQLPAKLRSEPLKFD-APQLLTLPDVFPNGLANKYTFGPIGELWYRKSGTYRGKVQ----NLTQFYHPL 337 (481)
T ss_dssp EEEEEEEECCGGGSCGGGGGSTTCCC------------------------------CCSCCEEEEEE----EHHHHHC--
T ss_pred EEEEeCCcCcccccccccccCccccc-cccccCCCccCcHHHHhHHHHHHHHHHHHhhCcccccccc----cceeeechh
Confidence 0 0000 00 000111000 0000111100000000000011111111110000001111 112222222
Q ss_pred HHHHHHHHhcCC--ceeeEEeecchhHHHHHHHHHHHHhhcC-----cE-EEEeecCCCc---------eeEeeccCCCC
Q 009201 404 EGIAEALMKAGA--VYKYDLSLPVEKMYDLVEKMRQRLGETA-----KV-IGYGHLGDGN---------LHLNISAPRYD 466 (540)
Q Consensus 404 ~~~~~~~~~~g~--~~~~Dv~vP~~~l~~~v~~~~~~l~~~~-----~~-~~~gH~gdGn---------lh~~i~~~~~~ 466 (540)
+.+.......|. ...++.+||.+ .++.++++.+.+.+.+ .+ .-|+-..++. +.+.+.. .
T Consensus 338 d~v~~~nr~yg~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~~~~~~~v~~R~~~~d~~~LS~~~~~~tlal~~~~--~- 413 (481)
T 4feh_A 338 DMFGEWNRAYGPAGFLQYQFVIPTE-AVDEFKKIIGVIQASGHYSFLNVFKLFGPRNQAPLSFPIPGWNICVDFPI--K- 413 (481)
T ss_dssp -----CHHHHTTTSEEEEEEEEETT-CHHHHHHHHHHHHHTTCCCSCCEEEEECCCCSCTTCCCCSEEEEEEEEEC--C-
T ss_pred hhccccccccCCCCcEEEEEEeccc-HHHHHHHHHHHHHhcCCCceEEEEEEEeCCCCccCCCCCCceEEEEEccC--C-
Confidence 222221122232 56789999999 9999999988887765 11 2233222221 1111111 1
Q ss_pred hHHHHHHHHHHHHHHHhcCCeEEeecCCchhhhhhhhccCCHHHHHHHHHHhHhcCCCCCCC
Q 009201 467 DMIFAQIEPYVYEWTSEHRGSISAEHGLGLMKANKIFYSKSPKTVQLMSSIKKLLDPNGILN 528 (540)
Q Consensus 467 ~~~~~~~~~~v~~~~~~~gGsis~eHGiG~~k~~~l~~~~~~~~~~~m~~IK~~~DP~giLN 528 (540)
+ ...++...+.+.+.++||.+.-..--. +.++.+...| +.++.++++|+.+||+|+|.
T Consensus 414 ~-~~~~~~~~le~i~~~~gGRphw~K~~~-~~~~~~~~~Y--P~~~~F~~lr~~~DP~g~F~ 471 (481)
T 4feh_A 414 D-GLGKFVSELDRRVLEFGGRLYTAKDSR-TTAETFHAMY--PRVDEWISVRRKVDPLRVFA 471 (481)
T ss_dssp T-THHHHHHHHHHHHHHTTCEECGGGCSS-CCHHHHHHHC--TTHHHHHHHHHHHCTTCCBC
T ss_pred c-cHHHHHHHHHHHHHHcCCEecchhccC-CCHHHHHHhC--cCHHHHHHHHHhhCCccccC
Confidence 1 234556677888899999987333222 2355666666 46899999999999999874
No 12
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.4e-34 Score=311.08 Aligned_cols=208 Identities=19% Similarity=0.222 Sum_probs=178.5
Q ss_pred CHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEee
Q 009201 98 DEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITFD 174 (540)
Q Consensus 98 ~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~id 174 (540)
++..+....+.|+..+.+.|.+|++|+|++ ++|++|+++++||+++||||++.|.+. ..+|++|||++||+| ++|
T Consensus 20 ~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d 97 (459)
T 2bvf_A 20 DDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HID 97 (459)
T ss_dssp TSTTHHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEE
T ss_pred CCccHHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EEC
Confidence 333455556778888899999999999999 999999999999999999999988663 357999999999999 899
Q ss_pred CCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCcEEEccC
Q 009201 175 KGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLG 254 (540)
Q Consensus 175 ~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~ 254 (540)
+++.+|+||||++|.+|+++|.++|+.+|. |.+..++|||++.++++|+.+.+||.++|+|+++|||++||+++++++
T Consensus 98 ~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~--g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~~~vV~~~G~i~~~~~ 175 (459)
T 2bvf_A 98 TAGSRARIGGGVISGDLVKEAAKFGLAAVT--GMHPKVGFCGLALNGGVGFLTPKYGLASDNILGATLVTATGDVIYCSD 175 (459)
T ss_dssp TTTTEEEEETTCBHHHHHHHHHTTTEEECC--CSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEES
T ss_pred CCCCEEEECCCCCHHHHHHHHHHcCCEecC--CCCCCcccceeecCCCCccccccccCHhHhEEEEEEEcCCCeEEEeCC
Confidence 999999999999999999999999999875 566778999999999999999999999999999999999999999875
Q ss_pred CcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCC--HH--HHHHHHHHHH
Q 009201 255 TLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKD--YF--SCQKLLREAK 314 (540)
Q Consensus 255 ~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~--~~--~~~~~~~~~~ 314 (540)
. .++||+|+++|++|+|||||+++||++|.|.......+.|+. .+ ++++++.++.
T Consensus 176 ~-----~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (459)
T 2bvf_A 176 D-----ERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDAL 234 (459)
T ss_dssp S-----SSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred C-----CChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHH
Confidence 4 357999999999999999999999999997555444444543 44 4555555543
No 13
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=1.6e-32 Score=298.93 Aligned_cols=195 Identities=21% Similarity=0.304 Sum_probs=167.7
Q ss_pred ceecCHHHHHHhh-hhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCC
Q 009201 94 SVIQDEDVLLAAN-EDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNN 169 (540)
Q Consensus 94 ~v~~~~~~l~~~~-~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~ 169 (540)
-+..++..+.... +.|+.++.+.|.+|++|+|++ ++|++|+++++||+++||||++.|.+.+..+||+|||++||+
T Consensus 32 v~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l~~ 111 (521)
T 2ipi_A 32 KVDRVDRRYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQMRQ 111 (521)
T ss_dssp EEESSSTTHHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTTCCEEEECTTCCC
T ss_pred EECCCCcchHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCeEEEecccCCC
Confidence 3444545555555 778888889999999999999 999999999999999999999988765556799999999999
Q ss_pred eEEeeCCCcEEEEcCCccHHHHHHHHH-hcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecC--
Q 009201 170 IITFDKGSGVLVCEAGCILENLVSFLD-DHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLAN-- 246 (540)
Q Consensus 170 i~~id~~~~~v~v~aGv~~~~l~~~l~-~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~-- 246 (540)
| ++|+++.+|+||||++|.+|+++|. ++|+.+|. |.+..++|||++.++++|+.+.+||.++|+|+++|||++|
T Consensus 112 i-~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~ 188 (521)
T 2ipi_A 112 V-FYDSGKRAFAVEPGATLGETYRALYLDWGVTIPA--GVCPQVGVGGHVLGGGYGPLSRRDGVVADHLYAVEVVVVDAS 188 (521)
T ss_dssp E-EEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCC--CSCTTCBHHHHTTTTCCCTTHHHHCCGGGGEEEEEEEEECTT
T ss_pred e-EEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCC--CCCCCcccCCcccCCCCCccccccccHhhcEEEEEEEEecCC
Confidence 9 8999999999999999999999997 79999875 5666789999999999999999999999999999999977
Q ss_pred CcEEEccCCcccCCCCCchhhhhhcc-CCCeeEEEEEEEEe-----------ccCCc
Q 009201 247 GDVIDMLGTLRKDNTGYDLKHLFIGS-EGSLGIVTKVSIHT-----------PPKLS 291 (540)
Q Consensus 247 G~v~~~~~~~~k~~~g~dL~~~~~Gs-~G~lGIIt~~~l~l-----------~p~p~ 291 (540)
|+++.+.....+++.++||+|+++|+ +|+|||||+++||+ +|.|+
T Consensus 189 G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~ 245 (521)
T 2ipi_A 189 GRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAP 245 (521)
T ss_dssp SCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCC
T ss_pred ccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCC
Confidence 99755432212345556799999985 79999999999999 88875
No 14
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=1.6e-32 Score=297.83 Aligned_cols=222 Identities=15% Similarity=0.167 Sum_probs=180.9
Q ss_pred HHHHHHhhCCCc--eec-CHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCccc-
Q 009201 83 VSYFKELLGEKS--VIQ-DEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVP- 155 (540)
Q Consensus 83 ~~~l~~~~g~~~--v~~-~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~- 155 (540)
+++|+++++... +.. +...+......|+..+.+.|.+|++|+|++ ++|++|+++++||+++||||++.+.+.+
T Consensus 6 ~~~l~~~l~~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~ 85 (503)
T 1zr6_A 6 FNSINACLAAADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFGG 85 (503)
T ss_dssp TCHHHHHHHHTTCEECCTTSHHHHHHTSCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTTS
T ss_pred HHHHHHhhCcCCceecCCCccchHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccC
Confidence 356777776433 222 333344445678878899999999999999 9999999999999999999999886554
Q ss_pred CCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhc-CCcccccCCCCCcceecccccCCCCCCCcccccccc
Q 009201 156 VFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDH-GFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLH 234 (540)
Q Consensus 156 ~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~-Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~ 234 (540)
.++|++|||++||+| ++| ++++|+||||+++.+|+++|.++ |+.+|. |.+..++|||.+.++++|+.+.+||.++
T Consensus 86 ~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~ 161 (503)
T 1zr6_A 86 EDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALSH--GTCPAVGVGGHVLGGGYGFATHTHGLTL 161 (503)
T ss_dssp SSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCC--CSCTTSBHHHHHHHCCCSTTHHHHCCGG
T ss_pred CCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCC--CCCCcCchhhhhcCCCCCcccccccChh
Confidence 456899999999999 899 88899999999999999999666 588774 5666788999999999999999999999
Q ss_pred ccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecC-CHHHHHHHHHHH
Q 009201 235 GNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACK-DYFSCQKLLREA 313 (540)
Q Consensus 235 d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~-~~~~~~~~~~~~ 313 (540)
|+|++++||++||++++++.. .++||+|+++|++|+|||||+++||++|.|+......+.+. +.+++.+++..+
T Consensus 162 D~v~~~~vV~a~G~i~~~~~~-----~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (503)
T 1zr6_A 162 DWLIGATVVLADASIVHVSET-----ENADLFWALRGGGGGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHVAGLKAL 236 (503)
T ss_dssp GGEEEEEEECTTSCEEEEBTT-----BSHHHHHHHTTCCSSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHHHHHHHH
T ss_pred heEEEEEEEecCCCEEEeCCC-----CCccHHHHHhccCCCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHHHHHHHH
Confidence 999999999999999998754 46799999999999999999999999999975544444332 234444444433
No 15
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=6.4e-33 Score=300.17 Aligned_cols=204 Identities=18% Similarity=0.249 Sum_probs=173.4
Q ss_pred hhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcc-cCCCcEEEEeCCCCCeEEeeCCCcEEE
Q 009201 106 NEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSV-PVFDEVIINMGSMNNIITFDKGSGVLV 181 (540)
Q Consensus 106 ~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~-~~~~gvvIdl~~ln~i~~id~~~~~v~ 181 (540)
+..|+......|.+|++|+|++ ++|++|+++++||+++||||++.|.+. +..+||+|||++||+| ++|+++.+++
T Consensus 43 n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~ 121 (518)
T 3vte_A 43 NLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAW 121 (518)
T ss_dssp BGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEE
T ss_pred ccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEE
Confidence 3458777788999999999999 999999999999999999999988764 3357999999999998 8999999999
Q ss_pred EcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCcEEEccCCcccCCC
Q 009201 182 CEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKDNT 261 (540)
Q Consensus 182 v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~ 261 (540)
||||+++.+|+++|.++|+.+...+|.++.++|||.++++++|..+.+||.++|+|++++||++||++++.. ..
T Consensus 122 V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~------~~ 195 (518)
T 3vte_A 122 VEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRK------SM 195 (518)
T ss_dssp EETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHH------HH
T ss_pred EeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccCCCCchhheEEEEEEEccCCeEEEee------cc
Confidence 999999999999999986544333577788899999999999999999999999999999999999999531 23
Q ss_pred CCchhhhhhcc-CCCeeEEEEEEEEeccCCcceeEEEeecC-CHHHHHHHHHHHHHH
Q 009201 262 GYDLKHLFIGS-EGSLGIVTKVSIHTPPKLSSVNLAFLACK-DYFSCQKLLREAKRK 316 (540)
Q Consensus 262 g~dL~~~~~Gs-~G~lGIIt~~~l~l~p~p~~~~~~~~~~~-~~~~~~~~~~~~~~~ 316 (540)
++||+|+++|+ +|+|||||+++||++|.|+......+.+. +.+++.+++..+++.
T Consensus 196 ~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~l~~~~~~ 252 (518)
T 3vte_A 196 GEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIHGLVKLFNKWQNI 252 (518)
T ss_dssp CHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHHHHHHHHHHHHHH
T ss_pred ccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHHHHHHHHHHHHHH
Confidence 57999999998 88999999999999999976544444432 456666777666543
No 16
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=5e-32 Score=292.95 Aligned_cols=193 Identities=13% Similarity=0.156 Sum_probs=166.0
Q ss_pred hhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeC
Q 009201 89 LLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMG 165 (540)
Q Consensus 89 ~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~ 165 (540)
-+...-+..++..+....+.|+.++.+.|.+|++|+|++ ++|++|+++++||+++||||++.|.+.+.++|++|||+
T Consensus 7 s~~~~~~~p~~~~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~gvvIdl~ 86 (501)
T 3pop_A 7 SVPPFTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVLDLH 86 (501)
T ss_dssp --CCEEEETTSTTHHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSCCSEEEECT
T ss_pred cCCCceECCCCcchHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCCCEEEEEec
Confidence 333333445555566667788888899999999999999 99999999999999999999999887665679999999
Q ss_pred CCCCeEEeeCCCcEEEEcCCccHHHHHHHHH-hcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEe
Q 009201 166 SMNNIITFDKGSGVLVCEAGCILENLVSFLD-DHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVL 244 (540)
Q Consensus 166 ~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~-~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~ 244 (540)
+||+| ++|+++.+++||||+++.+|+++|. ++|+.+|. |.+..++|||.++++++|..+.+||.++|+|+++|||+
T Consensus 87 ~l~~i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~--G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v~~~evV~ 163 (501)
T 3pop_A 87 NLHAI-GPAADGAGVRVGSGATVDQVQKALFRRWNAALPL--GACSAVGMGGLVAGGGYGPLSRQLGLVVDHLHAVEVAV 163 (501)
T ss_dssp TCCCE-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCC--CSBTTCBHHHHHHHCCCCTTHHHHCCGGGGEEEEEEEE
T ss_pred ccCCe-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCC--CCCCCceEeeccccCCCcccccccccHHHhEEEEEEEE
Confidence 99998 8999999999999999999999996 57998874 66777889999999999999999999999999999999
Q ss_pred --cCCc--EEEccCCcccCCCCCchhhhhhcc-CCCeeEEEEEEEEe
Q 009201 245 --ANGD--VIDMLGTLRKDNTGYDLKHLFIGS-EGSLGIVTKVSIHT 286 (540)
Q Consensus 245 --~~G~--v~~~~~~~~k~~~g~dL~~~~~Gs-~G~lGIIt~~~l~l 286 (540)
+||+ ++.++++ ....++||+|+++|+ +|+|||||+++||+
T Consensus 164 ~da~G~~~~v~~~~~--~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 164 VDESRTVRLVTARAD--DTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp ECTTSCEEEEEEETT--CCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred ecCCCCEEEEEeccC--CCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 8999 5554321 123567999999998 79999999999998
No 17
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.9e-31 Score=290.61 Aligned_cols=185 Identities=19% Similarity=0.228 Sum_probs=160.1
Q ss_pred cCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEe
Q 009201 97 QDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITF 173 (540)
Q Consensus 97 ~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~i 173 (540)
.++..+....+.|+.++.+.|.+|++|+|++ ++|++|+++++||+++||||++.|.+.+..+|++|||++||+| ++
T Consensus 39 p~~~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~i-~~ 117 (530)
T 2y3s_A 39 PGDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAV-GF 117 (530)
T ss_dssp TTSTTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCCE-EE
T ss_pred CCCccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCCCeEEEEcccCCCE-EE
Confidence 3444466666778878889999999999999 9999999999999999999999887655467999999999999 89
Q ss_pred eCCCcEEEEcCCccHHHHHHHHHh-cCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEe--cCCcEE
Q 009201 174 DKGSGVLVCEAGCILENLVSFLDD-HGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVL--ANGDVI 250 (540)
Q Consensus 174 d~~~~~v~v~aGv~~~~l~~~l~~-~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~--~~G~v~ 250 (540)
|+++.+|+||||++|.+|+++|.+ +|+.+|. |.++.++|||+++++++|+.+.+||.++|+|+++|||+ ++|+++
T Consensus 118 d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~ 195 (530)
T 2y3s_A 118 DEERGAFAVEAGATLGAVYKTLFRVWGVTLPG--GACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDAR 195 (530)
T ss_dssp ETTTTEEEEETTCBHHHHHHHHHHHHSCCCCC--CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEE
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeC--CCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEE
Confidence 999999999999999999999985 9998875 77778899999999999999999999999999999999 559985
Q ss_pred Ec--cCCcccCCCCCchhhhhhcc-CCCeeEEEEEEEEe
Q 009201 251 DM--LGTLRKDNTGYDLKHLFIGS-EGSLGIVTKVSIHT 286 (540)
Q Consensus 251 ~~--~~~~~k~~~g~dL~~~~~Gs-~G~lGIIt~~~l~l 286 (540)
.+ +++ +.+..+||+|+++|+ +|+|||||+++||+
T Consensus 196 ~v~~~~~--~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l 232 (530)
T 2y3s_A 196 TVIATRE--PSDPNHDLWWAHTGGGGGNFGVVVRYWLRT 232 (530)
T ss_dssp EEEEESC--TTCTTHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred EEecccc--ccCCChHHHHHHhcCCCCCcEEEEEEEEEe
Confidence 44 321 122333599999986 68999999999999
No 18
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=4.1e-32 Score=292.25 Aligned_cols=214 Identities=19% Similarity=0.218 Sum_probs=182.4
Q ss_pred ceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcc-cCCCcEEEEeCCCCC
Q 009201 94 SVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSV-PVFDEVIINMGSMNN 169 (540)
Q Consensus 94 ~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~-~~~~gvvIdl~~ln~ 169 (540)
.+..++..+....+.|+.++.+.|.+|++|+|++ ++|++|+++++||+++|||||+.|.+. +.+++|+|||++||+
T Consensus 14 v~~p~~~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~ 93 (473)
T 3rja_A 14 IDIPGTADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMID 93 (473)
T ss_dssp BCCTTSHHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCC
T ss_pred EECCCCCchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCc
Confidence 4445555667777889888999999999999999 999999999999999999999986443 235689999999999
Q ss_pred eEEeeCCCcEEEEcCCccHHHHHHHHHhcC-CcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCc
Q 009201 170 IITFDKGSGVLVCEAGCILENLVSFLDDHG-FIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGD 248 (540)
Q Consensus 170 i~~id~~~~~v~v~aGv~~~~l~~~l~~~G-l~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~ 248 (540)
|.++|+++.+++||||+++.+|+++|.++| +.+|. |++..++|||.+++|++|..+.+||.++|+|++++||++||+
T Consensus 94 i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~--G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v~~~~vV~a~G~ 171 (473)
T 3rja_A 94 VISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISH--GTCPGVGISGHFAHGGFGFSSHMHGLAVDSVVGVTVVLADGR 171 (473)
T ss_dssp EEEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCC--CSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTSC
T ss_pred eEEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEecc--CCCCCcEeeeeccCCCCCcccccccchHhheeeEEEEecCCe
Confidence 977999999999999999999999999999 77764 777788999999999999999999999999999999999999
Q ss_pred EEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEee--cCCHHHHHHHHHHHH
Q 009201 249 VIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLA--CKDYFSCQKLLREAK 314 (540)
Q Consensus 249 v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~--~~~~~~~~~~~~~~~ 314 (540)
+++++.+ .++||+|+++|++|+|||||+++||++|.|+......+. +++.+++.+++..++
T Consensus 172 v~~~~~~-----~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (473)
T 3rja_A 172 IVEASAT-----ENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALKGIEAVE 234 (473)
T ss_dssp EEEEETT-----BSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHHHHHHHH
T ss_pred EEEeCCC-----CCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHHHHHHHH
Confidence 9998754 467999999999999999999999999999765544433 332444555555443
No 19
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.97 E-value=1.3e-31 Score=289.20 Aligned_cols=200 Identities=18% Similarity=0.229 Sum_probs=174.6
Q ss_pred hhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccC-CCcEEEEeCCCCCeEEeeCCCcEEE
Q 009201 106 NEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPV-FDEVIINMGSMNNIITFDKGSGVLV 181 (540)
Q Consensus 106 ~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~-~~gvvIdl~~ln~i~~id~~~~~v~ 181 (540)
+..|.......|.+|++|+|++ ++|++|+++++||+++||||++.|.+.+. .+|++|||++||+| ++|+++.+++
T Consensus 35 n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~ 113 (495)
T 3fw9_A 35 NPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAW 113 (495)
T ss_dssp CGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEE
T ss_pred hcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEE
Confidence 4578777788999999999999 99999999999999999999998887643 36899999999999 9999999999
Q ss_pred EcCCccHHHHHHHHHhc--CCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCcEEEccCCcccC
Q 009201 182 CEAGCILENLVSFLDDH--GFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGDVIDMLGTLRKD 259 (540)
Q Consensus 182 v~aGv~~~~l~~~l~~~--Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~~~~~~~k~ 259 (540)
||||+++.+|+++|.++ |+.+| +|++..++|||.++++++|..+.+||.++|+|++++||++||++++ . .
T Consensus 114 V~aG~~l~~l~~~l~~~g~gl~~~--~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~-~-----~ 185 (495)
T 3fw9_A 114 VESGSTLGELYYAITESSSKLGFT--AGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILD-R-----Q 185 (495)
T ss_dssp EETTCBHHHHHHHHHHHCSSEECC--CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEEC-H-----H
T ss_pred EcCCCCHHHHHHHHHHhcCCceec--cCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEE-c-----C
Confidence 99999999999999999 66766 4788889999999999999999999999999999999999999986 1 3
Q ss_pred CCCCchhhhhhc-cCCCeeEEEEEEEEeccCCcceeEEEeecC-CHHHHHHHHHHHH
Q 009201 260 NTGYDLKHLFIG-SEGSLGIVTKVSIHTPPKLSSVNLAFLACK-DYFSCQKLLREAK 314 (540)
Q Consensus 260 ~~g~dL~~~~~G-s~G~lGIIt~~~l~l~p~p~~~~~~~~~~~-~~~~~~~~~~~~~ 314 (540)
..++||+|+++| ++|+|||||+++||++|.|+......+.++ +.+++.+++..++
T Consensus 186 ~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~~~~ 242 (495)
T 3fw9_A 186 AMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQ 242 (495)
T ss_dssp HHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHHHHH
T ss_pred CCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHHHHH
Confidence 357899999998 889999999999999999987665555553 3456666666554
No 20
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.97 E-value=1e-30 Score=284.69 Aligned_cols=201 Identities=20% Similarity=0.277 Sum_probs=169.4
Q ss_pred CHHHHHHhh-hhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEe
Q 009201 98 DEDVLLAAN-EDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITF 173 (540)
Q Consensus 98 ~~~~l~~~~-~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~i 173 (540)
++..+.... +.|+.++.+.|.+|++|+|++ ++|++|+++++||+++||||++.|.+.+..+|++|||++||+| ++
T Consensus 38 ~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~ 116 (523)
T 2wdx_A 38 DDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AY 116 (523)
T ss_dssp TSTTHHHHHTCSSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EE
T ss_pred CCcchHHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EE
Confidence 333455454 667777889999999999998 9999999999999999999999987765567999999999999 89
Q ss_pred eCCCcEEEEcCCccHHHHHHHHH-hcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecC--CcEE
Q 009201 174 DKGSGVLVCEAGCILENLVSFLD-DHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLAN--GDVI 250 (540)
Q Consensus 174 d~~~~~v~v~aGv~~~~l~~~l~-~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~--G~v~ 250 (540)
|+++.+|+||||++|.+|+++|. ++|+.+|. |+++.++|||+++++++|+.+.+||.++|+|+++|||++| |+++
T Consensus 117 d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~--G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~ 194 (523)
T 2wdx_A 117 DPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPG--GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKAR 194 (523)
T ss_dssp ETTTTEEEECTTCBHHHHHHHHHHHHSCCCCC--CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEE
T ss_pred cCCCCEEEEcCCCCHHHHHHHHHHhcCeEEcc--CCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEE
Confidence 99999999999999999999998 59999875 7777889999999999999999999999999999999955 9986
Q ss_pred EccCCcccCCCCCchhhhhhc-cCCCeeEEEEEEEEe-----------ccCCcc-eeEEEeecC
Q 009201 251 DMLGTLRKDNTGYDLKHLFIG-SEGSLGIVTKVSIHT-----------PPKLSS-VNLAFLACK 301 (540)
Q Consensus 251 ~~~~~~~k~~~g~dL~~~~~G-s~G~lGIIt~~~l~l-----------~p~p~~-~~~~~~~~~ 301 (540)
.+.....+++.++||+|+++| ++|+|||||+++||+ +|.|+. .....+.|+
T Consensus 195 ~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~~~~~~~~ 258 (523)
T 2wdx_A 195 VIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLLTSTVTFD 258 (523)
T ss_dssp EEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEEEEEEECC
T ss_pred EEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEEEEEEEec
Confidence 553221235566779999996 569999999999999 998753 333444443
No 21
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.97 E-value=1.6e-29 Score=277.48 Aligned_cols=195 Identities=21% Similarity=0.305 Sum_probs=164.3
Q ss_pred HhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCccc----CCCcEEEEe-CCCCCeEEeeC
Q 009201 104 AANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVP----VFDEVIINM-GSMNNIITFDK 175 (540)
Q Consensus 104 ~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~----~~~gvvIdl-~~ln~i~~id~ 175 (540)
.+.++|+..+.+.|.+|++|+|++ ++|++|+++++||+++|+|||+.+.++. ..+|++||| ++||+| ++|+
T Consensus 23 ~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~ 101 (561)
T 2i0k_A 23 QAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNT 101 (561)
T ss_dssp EEEECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEEC
T ss_pred HHHhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecC
Confidence 345789888999999999999999 9999999999999999999998543221 135799999 899998 9998
Q ss_pred --CCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCC----------ccccccccccEeEeEEE
Q 009201 176 --GSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLR----------LVRYGSLHGNVLGLEAV 243 (540)
Q Consensus 176 --~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~----------~~~yG~~~d~V~~~~vV 243 (540)
++++|+||||+++.+|.++|.++|+.+|..|+. +.+||||++++|+||.. +.+||.++|+|+++++|
T Consensus 102 ~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~~~s~~~~G~~~d~V~~~evV 180 (561)
T 2i0k_A 102 GGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTTLPGHTYGSLSNLVTELTAV 180 (561)
T ss_dssp CSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCCCTTCCSSCGGGGEEEEEEE
T ss_pred cCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCcccccccccccHhheEEEEEEE
Confidence 789999999999999999999999999987765 56899999999999986 77899999999999999
Q ss_pred ecCCc---EEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHHHH
Q 009201 244 LANGD---VIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQKL 309 (540)
Q Consensus 244 ~~~G~---v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~ 309 (540)
++||+ ++++++ ++ +||+++++|. |. ||||+++||+.|.|......+..++ ++++++.
T Consensus 181 ~~dG~~~~~~~~~~----~~--~dl~~a~~g~-G~-giIt~~tl~l~p~~~~~~~~~~~~~-~~~~l~~ 240 (561)
T 2i0k_A 181 VWNGTTYALETYQR----ND--PRITPLLTNL-GR-CFLTSVTMQAGPNFRQRCQSYTDIP-WRELFAP 240 (561)
T ss_dssp EECSSSEEEEEEET----TS--GGGHHHHSCT-TS-SCEEEEEEECEECCEEEEEEECCSC-HHHHTCC
T ss_pred eCCCCEEEeeeccC----CC--ccHHHHHhcC-CC-EEEEEEEEEEEECCceEEEEEEccC-HHHHHHH
Confidence 99999 666543 22 4898888844 55 8999999999999976665555444 5555544
No 22
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.97 E-value=6.6e-33 Score=284.62 Aligned_cols=191 Identities=17% Similarity=0.289 Sum_probs=166.2
Q ss_pred CCHHHHHHHHHhhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcc
Q 009201 78 LNSEDVSYFKELLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSV 154 (540)
Q Consensus 78 ~~~~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~ 154 (540)
++.+++++|++++|+++|.+ ++.+..|+++ .+.+.|.+|++|+|++ +++++|+++++|++++|||||+.++..
T Consensus 14 ~~~~~~~~l~~~l~~~~v~~-~~~l~~~~t~---~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~ 89 (326)
T 1hsk_A 14 INKDIYQALQQLIPNEKIKV-DEPLKRYTYT---KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREG 89 (326)
T ss_dssp -CHHHHHHHHHHSCGGGEEE-EEEGGGTCTT---SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTT
T ss_pred chHHHHHHHHHhcCccceec-CcchHHhccC---CcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCC
Confidence 77889999999999878888 6678888753 4788899999999998 999999999999999999999987765
Q ss_pred cCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCC----cccccCCCCCcceecccccCCCCCCCcccc
Q 009201 155 PVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGF----IMPLDLGAKGSCQIGGNVSTNAGGLRLVRY 230 (540)
Q Consensus 155 ~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl----~lp~~~~s~~~~tvGG~ia~na~G~~~~~y 230 (540)
+. +|++|||++||+| ++|+ .+++||||++|.+|+++|.++|+ +++.+|+ ||||++++|+|| |
T Consensus 90 ~~-~gvvI~l~~m~~i-~id~--~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg-----tvGG~i~~nagg-----y 155 (326)
T 1hsk_A 90 GI-RGIVISLLSLDHI-EVSD--DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG-----SIGGAVYMNAGA-----Y 155 (326)
T ss_dssp CE-EEEEEECTTCCCE-EEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS-----BHHHHHHHTCEE-----T
T ss_pred CC-CeEEEEeCCCCce-EEcC--CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc-----hhhHHHhccccc-----C
Confidence 43 6899999999999 8874 68999999999999999999999 7777664 799999999988 6
Q ss_pred c-cccccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccC-Ccc
Q 009201 231 G-SLHGNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPK-LSS 292 (540)
Q Consensus 231 G-~~~d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~-p~~ 292 (540)
| .++|+|+++++|++||++++++.+ +...||++..++ ++| ||||+++||++|. |+.
T Consensus 156 G~~~~d~v~~v~vv~~~G~i~~~~~~--~~~~gyr~~~l~--s~g--gIIt~~~l~l~p~~p~~ 213 (326)
T 1hsk_A 156 GGEVKDCIDYALCVNEQGSLIKLTTK--ELELDYRNSIIQ--KEH--LVVLEAAFTLAPGKMTE 213 (326)
T ss_dssp TEEHHHHEEEEEEECTTSCEEEEETT--TTTCBTTBCHHH--HTT--CEEEEEEEECEECCHHH
T ss_pred chhhhhhEEEEEEEeCCCCEEEEChH--HcCCCccccccC--CCC--EEEEEEEEEEEcCCHHH
Confidence 7 999999999999999999998765 566788876554 566 9999999999998 543
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.96 E-value=1.8e-29 Score=257.78 Aligned_cols=195 Identities=15% Similarity=0.256 Sum_probs=161.6
Q ss_pred CCHHHHHHHHHhhCCCceecCHHHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcc
Q 009201 78 LNSEDVSYFKELLGEKSVIQDEDVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSV 154 (540)
Q Consensus 78 ~~~~~~~~l~~~~g~~~v~~~~~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~ 154 (540)
++++++++|+++++++++.++ +.+..|++ | ++.+.|+++++|+|++ +++++|+++++|++++|+|||+.++..
T Consensus 20 ~~~~~~~~L~~~lg~~~v~~~-~~l~~~tt-~--~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~ 95 (322)
T 3tx1_A 20 FQSNAMNNLQTKFPHIAIKLN-EPLSKYTY-T--KTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDG 95 (322)
T ss_dssp -----CCCHHHHCTTSEEEEE-EEGGGGST-T--SCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTT
T ss_pred cCHHHHHHHHHhcCCcceEcC-cchHHhcc-C--CcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCC
Confidence 556778899999999889888 67888885 2 6788999999999988 899999999999999999999976543
Q ss_pred cCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCcccccccc
Q 009201 155 PVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLH 234 (540)
Q Consensus 155 ~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~ 234 (540)
+ .+|++|||++||+| .+|. .+++|+||++|.+|.++|.++|+. ++++.+..++||||++++|+||++ |.++
T Consensus 96 ~-~~gvvI~l~~~~~I-~~d~--~~v~v~aG~~~~~l~~~l~~~Gl~-Gle~~~giPgTVGGav~~NaGgyG----g~~~ 166 (322)
T 3tx1_A 96 G-IRGVILHLDLLQTI-ERNN--TQIVAMSGAKLIDTAKFALNESLS-GLEFACGIPGSIGGALHMNAGAYG----GEIS 166 (322)
T ss_dssp C-EEEEEEECTTCCCE-EEET--TEEEEETTSBHHHHHHHHHHTTEE-SCGGGTTCCSBHHHHHHHTCEETT----EEHH
T ss_pred C-CCeEEEECCCCCcE-EECC--CEEEEecCcCHHHHHHHHHHcCCc-ccccCCCCcchhHHHHHhCccCcc----cchH
Confidence 2 35899999999998 4763 599999999999999999999996 555555567899999999999965 8999
Q ss_pred ccEeEeEEEecCCcEEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCc
Q 009201 235 GNVLGLEAVLANGDVIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLS 291 (540)
Q Consensus 235 d~V~~~~vV~~~G~v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~ 291 (540)
|+|+++++|++||+++++++ +..+|+++.++.|+++ ||||+++||+.|.|.
T Consensus 167 d~v~~vevV~~~G~i~~~~~----~~~~~~yR~s~~g~~~--~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 167 DVLEAATVLTQTGELKKLKR----SELKAAYRFSTIAEKN--YIVLDATFSLALEEK 217 (322)
T ss_dssp HHEEEEEEECTTSCEEEEEG----GGCC--CC-CTTTGGG--CEEEEEEEECEECCH
T ss_pred hhEEEEEEEcCCCCEEEech----HHcCcchhhcccCCCC--EEEEEEEEEEEeCCH
Confidence 99999999999999998764 4567788777777665 799999999999874
No 24
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.95 E-value=3.9e-28 Score=261.77 Aligned_cols=191 Identities=16% Similarity=0.282 Sum_probs=161.2
Q ss_pred hhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCC-----CCcccCCCcEEEEeC-CCCCeEEeeCC
Q 009201 106 NEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLV-----GGSVPVFDEVIINMG-SMNNIITFDKG 176 (540)
Q Consensus 106 ~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~-----g~~~~~~~gvvIdl~-~ln~i~~id~~ 176 (540)
.++|+..+.+.|.+|++|+|++ ++|++|+++++||+++|+|||+. ++. +..+||+|||+ +||+| ++|++
T Consensus 19 ~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~vD~~ 96 (540)
T 3js8_A 19 FKNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-SIDAS 96 (540)
T ss_dssp EECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-EEECS
T ss_pred eeccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-EECCC
Confidence 4679888899999999999999 99999999999999999999996 544 55678999995 69999 99985
Q ss_pred --CcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCC----------ccccccccccEeEeEEEe
Q 009201 177 --SGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLR----------LVRYGSLHGNVLGLEAVL 244 (540)
Q Consensus 177 --~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~----------~~~yG~~~d~V~~~~vV~ 244 (540)
..+|+||||+++.+|+++|.++|+.++..++. +.+||||+|++|+||.+ +.+||.++|+|+++++|+
T Consensus 97 ~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi-~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~ 175 (540)
T 3js8_A 97 GPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAP-GDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVV 175 (540)
T ss_dssp SSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSC-SCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEE
T ss_pred CCccEEEEccCCCHHHHHHHHHHcCCEEEecCCC-CCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEc
Confidence 58999999999999999999999999877765 55899999999999986 479999999999999999
Q ss_pred cCCc-----EEEccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHHH
Q 009201 245 ANGD-----VIDMLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQK 308 (540)
Q Consensus 245 ~~G~-----v~~~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~ 308 (540)
+||+ ++++++ .++||+.++.|+ |+ ||||+++||++|.+......+. .-+++++++
T Consensus 176 adG~~~~~~i~~~s~------~~~DL~a~r~G~-G~-gIVTevtlrl~P~~~l~~~~~~-~~~~~e~l~ 235 (540)
T 3js8_A 176 YDKASGAYALRKFAR------NDPQIAPLLAHV-GR-SLIVEATLQAAPNQRLRCQSWF-NIPYGEMFA 235 (540)
T ss_dssp EETTTTEEEEEEEET------TSGGGHHHHTCT-TS-SCEEEEEEEEEECCEEEEEEEC-CSCHHHHTC
T ss_pred CCCCCceeeEEEeCC------CChhHHHHHhcC-CC-eEEEEEEEEEEECCceEEEEEe-cCCHHHHHh
Confidence 9998 666552 357996665554 77 5999999999999876544332 236666654
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.91 E-value=2.6e-24 Score=221.91 Aligned_cols=175 Identities=15% Similarity=0.101 Sum_probs=145.2
Q ss_pred HHHHHhhhhhhhccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEee--
Q 009201 100 DVLLAANEDWMRKYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITFD-- 174 (540)
Q Consensus 100 ~~l~~~~~d~~~~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~id-- 174 (540)
..|..|++ .++++.|+++++|+|++ +++++|+++++|++++|+|||+.++.. .+|++|+++ |++| +++
T Consensus 17 ~~L~~~tt---~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~-~~~i-~v~~~ 89 (357)
T 3i99_A 17 ANLKPYHT---FGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR-LNGI-EHQQD 89 (357)
T ss_dssp EESGGGST---TCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC-CCCE-EEEEC
T ss_pred Ccchhhcc---CCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC-CCce-EEecc
Confidence 34666763 37889999999999999 899999999999999999999976653 368999998 9998 565
Q ss_pred CCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCcccccc-ccccEeEeEEEec-CCcEEEc
Q 009201 175 KGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGS-LHGNVLGLEAVLA-NGDVIDM 252 (540)
Q Consensus 175 ~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~-~~d~V~~~~vV~~-~G~v~~~ 252 (540)
+++.+++|+||++|.+|.+++.++|+. ++++.+..++||||++++|+|. ||. ++|+|+++++|++ +|++++.
T Consensus 90 ~~~~~v~v~AG~~~~~l~~~a~~~Gl~-GlE~l~gIPGtVGGav~~NaGa-----YG~e~~d~v~~vevv~~~~G~i~~~ 163 (357)
T 3i99_A 90 DDYHRLHVAGGEDWPSLVSWCVEQGIG-GLENLALIPGCAGSAPIQNIGA-----YGVEFKDVCDYVEYLCLETGTVKRL 163 (357)
T ss_dssp SSEEEEEEETTSBHHHHHHHHHHTTCT-TCGGGTTCCSBGGGTTTTTCEE-----TTEEGGGTEEEEEEEETTTTEEEEE
T ss_pred CCceEEEEeCCCcHHHHHHHHHHcCCc-CccccCCCCchhHHHHHhchhh-----hhhhHHhhEeEEEEEECCCCcEEEE
Confidence 346689999999999999999999996 6677777788999999999985 575 9999999999998 9999988
Q ss_pred cCCcccCCCCCchhhhh-hccCCCeeEEEEEEEEeccCCc
Q 009201 253 LGTLRKDNTGYDLKHLF-IGSEGSLGIVTKVSIHTPPKLS 291 (540)
Q Consensus 253 ~~~~~k~~~g~dL~~~~-~Gs~G~lGIIt~~~l~l~p~p~ 291 (540)
+.+ ..+|++.... .+++|++||||+++|||.|.+.
T Consensus 164 ~~~----dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 164 TME----ECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp ETG----GGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred eHH----HcCcccccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 753 2334444332 3345789999999999999863
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=8e-24 Score=217.56 Aligned_cols=168 Identities=15% Similarity=0.138 Sum_probs=140.3
Q ss_pred ccCCCccEEEecCCHH---HHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEeeCCC-cEEEEcCCcc
Q 009201 112 KYRGSSKLLLQPRTTN---EILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITFDKGS-GVLVCEAGCI 187 (540)
Q Consensus 112 ~~~~~p~~vv~P~s~~---~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~id~~~-~~v~v~aGv~ 187 (540)
++.+.|+++++|+|++ +++++|+++++|++++|||||+.+... .+|++|+++ |++|..++.++ .+++|+||++
T Consensus 10 ~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~ 86 (340)
T 1uxy_A 10 GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGAGEN 86 (340)
T ss_dssp CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEETTSB
T ss_pred CCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEecCCC
Confidence 6788999999999998 899999999999999999999977652 368999996 99997777776 6899999999
Q ss_pred HHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEec-CCcEEEccCCcccCCCCCchh
Q 009201 188 LENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLA-NGDVIDMLGTLRKDNTGYDLK 266 (540)
Q Consensus 188 ~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~-~G~v~~~~~~~~k~~~g~dL~ 266 (540)
|.+|.+++.++|+. ++++.+..++||||++.+|+|+++ +.++|+|.++++|++ +|++++++.. ....||...
T Consensus 87 ~~~l~~~~~~~Gl~-Gle~~~gIPGtVGGa~~~NaGayG----~ei~d~v~~v~vv~~~~G~v~~~~~~--d~~~gYR~s 159 (340)
T 1uxy_A 87 WHRLVKYTLQEGMP-GLENLALIPGCVGSSPIQNIGAYG----VELQRVCAYVDSVELATGKQVRLTAK--ECRFGYRDS 159 (340)
T ss_dssp HHHHHHHHHHTTCC-SCGGGTTCCSBGGGTTTTTCEETT----EEGGGTEEEEEEEETTTTEEEEEETG--GGTCBTTBC
T ss_pred HHHHHHHHHHCCCC-ccccccCCccchhHHHHhccccch----hhHHhheeEEEEEECCCCcEEEEeHH--HhccccCcC
Confidence 99999999999996 667777778899999999998843 369999999999997 9999988754 122333321
Q ss_pred hhhhccCCCeeEEEEEEEEeccCC
Q 009201 267 HLFIGSEGSLGIVTKVSIHTPPKL 290 (540)
Q Consensus 267 ~~~~Gs~G~lGIIt~~~l~l~p~p 290 (540)
.+.++++++||||+++||+.|.|
T Consensus 160 -~~~~~~~~~gIVt~v~~~L~~~~ 182 (340)
T 1uxy_A 160 -IFKHEYQDRFAIVAVGLRLPKEW 182 (340)
T ss_dssp -GGGTTTTTTEEEEEEEEEEESSC
T ss_pred -ccCCcCCCCEEEEEEEEEEEcCC
Confidence 22334568999999999999986
No 27
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.89 E-value=1.8e-23 Score=202.10 Aligned_cols=127 Identities=24% Similarity=0.282 Sum_probs=116.3
Q ss_pred EeeCCCcEEEEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccccccccEeEeEEEecCCcEEE
Q 009201 172 TFDKGSGVLVCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVLGLEAVLANGDVID 251 (540)
Q Consensus 172 ~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~~~vV~~~G~v~~ 251 (540)
++|+++.+|+||||+++.+|+++|.++|+++|.+|++... ||||+|++|++| .+||.. |+|+++++|++||++++
T Consensus 2 ~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~~ 76 (219)
T 2yvs_A 2 EVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRVR 76 (219)
T ss_dssp EEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEEE
T ss_pred eEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEEE
Confidence 7899999999999999999999999999999998886655 999999999998 789999 99999999999999999
Q ss_pred ccCCcccCCCCCchhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCH
Q 009201 252 MLGTLRKDNTGYDLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDY 303 (540)
Q Consensus 252 ~~~~~~k~~~g~dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~ 303 (540)
++.+..|+..||||+++++|++|+|||||+++||++|.|+......+.+.++
T Consensus 77 ~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~~~~~~~ 128 (219)
T 2yvs_A 77 AGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGSF 128 (219)
T ss_dssp EECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEEECCSSC
T ss_pred ECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEEEecCCH
Confidence 9887678889999999999999999999999999999998776666655543
No 28
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.88 E-value=1.4e-23 Score=208.66 Aligned_cols=162 Identities=21% Similarity=0.177 Sum_probs=132.5
Q ss_pred HHHHhhhhhhhccCCCccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCCcccCCCcEEEEeCCCCCeEEeeCCCcEE
Q 009201 101 VLLAANEDWMRKYRGSSKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGGSVPVFDEVIINMGSMNNIITFDKGSGVL 180 (540)
Q Consensus 101 ~l~~~~~d~~~~~~~~p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~~~~~~~gvvIdl~~ln~i~~id~~~~~v 180 (540)
++..|++ | ++.+.|+ +++|+|++++.+.. ++|++++|+|||+.++..+.++|++|++++|++| ++|.
T Consensus 10 ~l~~~tt-~--~igg~a~-vv~p~s~edv~~~v---~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I-~vd~----- 76 (268)
T 2gqt_A 10 LLKDYTT-L--GVGGPAE-LWTVETREELKRAT---EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY-DLKG----- 76 (268)
T ss_dssp EGGGGSS-S--CCCCEEE-EEEECSHHHHHHHT---TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCB-CTTS-----
T ss_pred ChHHhcc-c--ccCcceE-EEEeCCHHHHHHHh---CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCc-EEcC-----
Confidence 3556654 3 6778889 99999999666655 8999999999999877766556999999999998 5652
Q ss_pred EEcCCccHHHHHHHHHhcCCcccccCCCCCcceecccccCCCCCCCccccc-cccccEeEeEEEecCCcEEEccCCcccC
Q 009201 181 VCEAGCILENLVSFLDDHGFIMPLDLGAKGSCQIGGNVSTNAGGLRLVRYG-SLHGNVLGLEAVLANGDVIDMLGTLRKD 259 (540)
Q Consensus 181 ~v~aGv~~~~l~~~l~~~Gl~lp~~~~s~~~~tvGG~ia~na~G~~~~~yG-~~~d~V~~~~vV~~~G~v~~~~~~~~k~ 259 (540)
+|+||++|.+|.+++.++|+. ++++.+..++||||++++|+|+ || .++|+|+++++| +||++++++.+
T Consensus 77 ~v~aG~~~~~l~~~~~~~Gl~-Gle~~~giPGtvGGav~~NaGa-----yG~e~~d~v~~v~vv-~~G~v~~~~~~---- 145 (268)
T 2gqt_A 77 WVGAGTLLPLLVQEAARAGLS-GLEGLLGIPAQVGGAVKMNAGT-----RFGEMADALEAVEVF-HDGAFHVYCPE---- 145 (268)
T ss_dssp EEETTSBHHHHHHHHHHTTEE-SCGGGTTCCCBHHHHHHTTCEE-----TTEEGGGGEEEEEEE-ETTEEEEECGG----
T ss_pred EEECCCCHHHHHHHHHHcCCc-CCccccCccchhHHHHHhcccc-----CchhHHhheeEEEEE-CCCcEEEEchH----
Confidence 999999999999999999996 7788888889999999999986 57 799999999999 99999988753
Q ss_pred CCCCchhhhhhccCCC-eeEEEEEEEEeccCC
Q 009201 260 NTGYDLKHLFIGSEGS-LGIVTKVSIHTPPKL 290 (540)
Q Consensus 260 ~~g~dL~~~~~Gs~G~-lGIIt~~~l~l~p~p 290 (540)
|+++.+++|.-. -||||+++||+.|.+
T Consensus 146 ----~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 146 ----ELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp ----GSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred ----HcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 344444444210 139999999999974
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.52 E-value=9.3e-08 Score=95.89 Aligned_cols=155 Identities=12% Similarity=0.076 Sum_probs=94.6
Q ss_pred ccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCC--cccCCCcEEEEeCC---CCCeEEeeCCCcEEEEcCCccHHHH
Q 009201 117 SKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGG--SVPVFDEVIINMGS---MNNIITFDKGSGVLVCEAGCILENL 191 (540)
Q Consensus 117 p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~--~~~~~~gvvIdl~~---ln~i~~id~~~~~v~v~aGv~~~~l 191 (540)
+--+++|+|.+++++...+++.+..+.||||++.-. .-....+++||+++ |+.| +.+ +..++++||+++.+|
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i-~~~--~~~l~iGA~~tl~~l 81 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGI-REE--GSTVVIGAMTVENDL 81 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCE-EEE--TTEEEEETTCBHHHH
T ss_pred cceEECCCCHHHHHHHHHhcCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcce-Eec--CCEEEEccCCcHHHH
Confidence 345889999996666554555678899999997321 00013479999985 6676 443 446999999999999
Q ss_pred HHH-HHhcCCcc-------cccCCCCCcceecccccCCCCCCCccccccccccEe----EeEEEecCCcEEEccCCcccC
Q 009201 192 VSF-LDDHGFIM-------PLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVL----GLEAVLANGDVIDMLGTLRKD 259 (540)
Q Consensus 192 ~~~-l~~~Gl~l-------p~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~----~~~vV~~~G~v~~~~~~~~k~ 259 (540)
.+. +.+.++.. -..+.-.+.+||||+|++|++. +.+...++ .+++..++| ..+...+
T Consensus 82 ~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~------~D~~~~l~Al~A~v~~~~~~G-~r~i~~~---- 150 (287)
T 1ffv_C 82 ISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG------NDHPALSIAVEAHFVLEGPNG-RRTVPAD---- 150 (287)
T ss_dssp HHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT------CSHHHHHHHTTCEEEEEETTE-EEEEEST----
T ss_pred hhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCCc------HHHHHHHHHcCcEEEEEcCCc-eEEEEHH----
Confidence 963 33333321 1112222358999999999752 23332222 578888998 3443322
Q ss_pred CCCCchhhhhhcc-CCCeeEEEEEEEEeccC
Q 009201 260 NTGYDLKHLFIGS-EGSLGIVTKVSIHTPPK 289 (540)
Q Consensus 260 ~~g~dL~~~~~Gs-~G~lGIIt~~~l~l~p~ 289 (540)
|++...+-+ ...-.||++++|.+.+.
T Consensus 151 ----df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 151 ----GFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp ----TTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred ----HHhcCcccccCCCCCEEEEEEecCCCC
Confidence 332222110 00114899999987653
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.73 E-value=9.5e-06 Score=86.35 Aligned_cols=154 Identities=13% Similarity=0.093 Sum_probs=91.7
Q ss_pred CCccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCC--cccCCCcEEEEeCC---CCCeEEeeCCCcEEEEcCCccHH
Q 009201 115 GSSKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGG--SVPVFDEVIINMGS---MNNIITFDKGSGVLVCEAGCILE 189 (540)
Q Consensus 115 ~~p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~--~~~~~~gvvIdl~~---ln~i~~id~~~~~v~v~aGv~~~ 189 (540)
|....+++|+|.++++++..++. +..+.||||++.-. .-....+++||+++ |+.| +.+ +..++++||+++.
T Consensus 175 G~a~~y~~P~sl~ea~~ll~~~~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I-~~~--~~~l~IGA~vtl~ 250 (462)
T 2w3s_A 175 GQTAPAFLPETSDALADWYLAHP-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQI-RET--PDGYGIGAGVTIA 250 (462)
T ss_dssp ----CCBCCSSHHHHHHHHHHCT-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCE-EEE--TTEEEEETTCBHH
T ss_pred CCccEEEecCCHHHHHHHHhhCC-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcE-EEc--CCEEEEccCCcHH
Confidence 44456789999996665544332 45678999998531 00113478999988 6776 444 3469999999999
Q ss_pred HHHHHHHhcCCc-c------cccCCCCCcceecccccCCCCCCCccccccccccEe----EeEEEecCCcEEEccCCccc
Q 009201 190 NLVSFLDDHGFI-M------PLDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVL----GLEAVLANGDVIDMLGTLRK 258 (540)
Q Consensus 190 ~l~~~l~~~Gl~-l------p~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~----~~~vV~~~G~v~~~~~~~~k 258 (540)
+|.+.+.+ .+. | -..+.-.+.+||||+|++++.+ +.+...++ .+++..++|+ .+..-+
T Consensus 251 ~l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp~~--- 319 (462)
T 2w3s_A 251 ALRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMPLE--- 319 (462)
T ss_dssp HHHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCBGG---
T ss_pred HHHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEEHH---
Confidence 99988543 331 0 0011112347999999998743 56666666 6777778873 222111
Q ss_pred CCCCCchhhhhhcc-CCCeeEEEEEEEEecc
Q 009201 259 DNTGYDLKHLFIGS-EGSLGIVTKVSIHTPP 288 (540)
Q Consensus 259 ~~~g~dL~~~~~Gs-~G~lGIIt~~~l~l~p 288 (540)
|++...+-+ ...-.||+++.|...+
T Consensus 320 -----dF~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 320 -----DFFLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp -----GGEEETTEESCCTTCEEEEEEEESCC
T ss_pred -----HhhcccccccCCCCcEEEEEEEecCC
Confidence 222221110 0011489999987654
No 31
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.65 E-value=3.8e-05 Score=76.88 Aligned_cols=120 Identities=17% Similarity=0.127 Sum_probs=76.8
Q ss_pred ccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCC--cccCCCcEEEEeCC---CCCeEEeeCCCcEEEEcCCccHHHH
Q 009201 117 SKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGG--SVPVFDEVIINMGS---MNNIITFDKGSGVLVCEAGCILENL 191 (540)
Q Consensus 117 p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~--~~~~~~gvvIdl~~---ln~i~~id~~~~~v~v~aGv~~~~l 191 (540)
+--+++|+|.++++++..+++-+..+.||||++.-. .-....+++||+++ |+.| +. +++.++++|++++.+|
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I-~~--~~~~l~IGA~~t~~~l 81 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKLGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGI-RE--EGTDVVIGAMTTQHAL 81 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCE-EE--ETTEEEEETTCBHHHH
T ss_pred ceEEECcCCHHHHHHHHHhcCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcce-Ee--cCCEEEEccCCcHHHH
Confidence 345889999997766654444467789999996321 00013479999987 5665 34 3457999999999999
Q ss_pred HH--HHHhcCCccc------ccCCCCCcceecccccCCCCCCCccccccccccEe-------EeEEEecCCc
Q 009201 192 VS--FLDDHGFIMP------LDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVL-------GLEAVLANGD 248 (540)
Q Consensus 192 ~~--~l~~~Gl~lp------~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~-------~~~vV~~~G~ 248 (540)
.+ .+.++--.|. ..|.-.+.+||||+|+++. ..+|.+. .+++..++|+
T Consensus 82 ~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~ 144 (288)
T 1n62_C 82 IGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA 144 (288)
T ss_dssp HHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE
T ss_pred hcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc
Confidence 94 4544210110 0111223579999999873 2455544 5667778884
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.47 E-value=0.00014 Score=73.34 Aligned_cols=129 Identities=18% Similarity=0.169 Sum_probs=79.9
Q ss_pred cCCCccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCCc--ccCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHH
Q 009201 113 YRGSSKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGGS--VPVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILEN 190 (540)
Q Consensus 113 ~~~~p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~~--~~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~ 190 (540)
+.+.+..+++|+|.++++++..++. ...+.+|||++.... -.....++||++++..+-.|..++..++++|++++.+
T Consensus 6 ~~g~~~~y~~P~sl~ea~~ll~~~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 84 (305)
T 3nvz_B 6 FEGERVTWIQASTLKELLDLKAQHP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSS 84 (305)
T ss_dssp EECSSCEEEECCSHHHHHHHHHHCT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHH
T ss_pred ecCCCeEEEccCCHHHHHHHHHhCC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcHHH
Confidence 4567788999999996666644432 245789999974210 0113468999997543322333456799999999999
Q ss_pred HHHHHHhc----C----Cccc---------ccCCCCCcceecccccCCCCCCCccccccccccEe----EeEEEecCCc
Q 009201 191 LVSFLDDH----G----FIMP---------LDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVL----GLEAVLANGD 248 (540)
Q Consensus 191 l~~~l~~~----G----l~lp---------~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~----~~~vV~~~G~ 248 (540)
+.+.+.++ . ..+| ..+.--+.+||||+|+++... +.+.-.++ .+++..++|+
T Consensus 85 l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~------sD~~~~L~AldA~v~l~~~~G~ 157 (305)
T 3nvz_B 85 VEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI------SDLNPVFMASGTKLTIVSRGTR 157 (305)
T ss_dssp HHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT------CSSHHHHHHHTCEEEEEETTEE
T ss_pred HHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc------hHHHHHHHHcCCEEEEEcCCCc
Confidence 99876532 0 0011 112223468999999987642 22222222 4566677884
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.91 E-value=0.00045 Score=69.00 Aligned_cols=122 Identities=11% Similarity=0.142 Sum_probs=74.3
Q ss_pred ccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCCc--ccCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHH-
Q 009201 117 SKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGGS--VPVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVS- 193 (540)
Q Consensus 117 p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~~--~~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~- 193 (540)
+--+++|+|.++++++..++ -...+.+|||++.... -......+||++++..+..+..+++.++++|++++.+|.+
T Consensus 5 ~f~y~~P~sl~ea~~ll~~~-~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~ 83 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLADD-PDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRNKTD 83 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHC-TTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHHHHC
T ss_pred CceEECCCCHHHHHHHHhhC-CCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHHhcC
Confidence 44588999999666654332 2245689999863110 0013468999998543222223456799999999999986
Q ss_pred -HHHhcCCccc------ccCCCCCcceecccccCCCCCCCccccccccccEe-------EeEEEecCCc
Q 009201 194 -FLDDHGFIMP------LDLGAKGSCQIGGNVSTNAGGLRLVRYGSLHGNVL-------GLEAVLANGD 248 (540)
Q Consensus 194 -~l~~~Gl~lp------~~~~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~-------~~~vV~~~G~ 248 (540)
.+.++--.|. ..|.--+.+|+||+|++.. ..+|... .+++..++|+
T Consensus 84 ~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~ 143 (288)
T 1t3q_C 84 PTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGV 143 (288)
T ss_dssp HHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEE
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCce
Confidence 4443211110 1233345679999998552 2455554 5667777774
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=96.30 E-value=0.00068 Score=67.96 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=64.5
Q ss_pred cEEEecCCHHHHHHHhcCCCc-eEEEEcCCCCCCCCc--ccCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHHHHH
Q 009201 118 KLLLQPRTTNEILKYCNSRLL-AVVPQGGNTGLVGGS--VPVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENLVSF 194 (540)
Q Consensus 118 ~~vv~P~s~~~iv~~a~~~~~-~v~~~GgGt~~~g~~--~~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l~~~ 194 (540)
--+++|+|.+++++...+++- ...+.+|||++.... -......+||++++..+-.|..+++.++++|++++.++.+.
T Consensus 4 f~y~~P~sl~ea~~ll~~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~ 83 (296)
T 3hrd_C 4 FEFFAPKTLEEAKGLLHQYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQIENH 83 (296)
T ss_dssp CEEECCSSHHHHHHHHHHTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHHHHHC
T ss_pred eeEeCCCCHHHHHHHHHhCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHHHHhC
Confidence 457899999977776555442 345689999873210 01134789999986433333345668999999999999742
Q ss_pred --HHhc-------CCcccccCCCCCcceecccccCC
Q 009201 195 --LDDH-------GFIMPLDLGAKGSCQIGGNVSTN 221 (540)
Q Consensus 195 --l~~~-------Gl~lp~~~~s~~~~tvGG~ia~n 221 (540)
+.++ =..+. .|.--+.+||||+|++.
T Consensus 84 ~~~~~~~p~L~~a~~~ia-s~qIRN~aTiGGNi~~a 118 (296)
T 3hrd_C 84 PFIRSHVRALYKAASQVG-SPQIRNLGTIGGNLSTS 118 (296)
T ss_dssp HHHHHHCHHHHHHHHTSS-CHHHHHHCBHHHHHHHT
T ss_pred hhhhhHhHHHHHHHHHhC-CHHHhcceehhhhhccC
Confidence 2211 01111 12223467999999864
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=94.30 E-value=0.016 Score=58.50 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=62.4
Q ss_pred cEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCC--cccCCCcEEEEeCCC---CCeEEeeCCCcEEEEcCCccHHHHH
Q 009201 118 KLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGG--SVPVFDEVIINMGSM---NNIITFDKGSGVLVCEAGCILENLV 192 (540)
Q Consensus 118 ~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~--~~~~~~gvvIdl~~l---n~i~~id~~~~~v~v~aGv~~~~l~ 192 (540)
--+++|+|.++++++..+. .-.+.+|||++... .-......+||++++ +.| +.++ ++.++++|++++.+|.
T Consensus 7 f~y~~P~sl~ea~~ll~~~--~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I-~~~~-~~~l~IGA~vt~~~l~ 82 (324)
T 1rm6_B 7 FRTHRPATLADAVNALAAE--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATI-STLA-DGSLRIGAGATLEAIA 82 (324)
T ss_dssp CEEECCSSHHHHHHHTTST--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCE-EECT-TSCEEEETTCBHHHHH
T ss_pred eEEEccCCHHHHHHHHhCC--CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcce-EECC-CCeEEEccCCcHHHHH
Confidence 3588999999777775543 35568999987311 000134789999886 555 3432 3368999999999998
Q ss_pred HH--HHhc-------CCcccccCCCCCcceecccccC
Q 009201 193 SF--LDDH-------GFIMPLDLGAKGSCQIGGNVST 220 (540)
Q Consensus 193 ~~--l~~~-------Gl~lp~~~~s~~~~tvGG~ia~ 220 (540)
+. +.++ =..+ ..|.--+.+||||+|++
T Consensus 83 ~~~~~~~~~p~L~~a~~~i-as~qIRN~aTiGGNl~~ 118 (324)
T 1rm6_B 83 EHDAIRTTWPALAQAAESV-AGPTHRAAATLGGNLCQ 118 (324)
T ss_dssp HCHHHHHHSHHHHHHHHHS-SCHHHHHHCBHHHHHTC
T ss_pred hChHHHHHHHHHHHHHHHh-CCHHHcceeEeeeeccc
Confidence 74 2221 0011 12333456799999974
No 36
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=88.99 E-value=0.16 Score=60.51 Aligned_cols=108 Identities=19% Similarity=0.183 Sum_probs=66.8
Q ss_pred CCCccEEEecCCHHHHHHHhcCCCceEEEEcCCCCCCCCcc--cCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHH
Q 009201 114 RGSSKLLLQPRTTNEILKYCNSRLLAVVPQGGNTGLVGGSV--PVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENL 191 (540)
Q Consensus 114 ~~~p~~vv~P~s~~~iv~~a~~~~~~v~~~GgGt~~~g~~~--~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l 191 (540)
.+.+..+++|.|.++++++..++. .-.+.+|||++.-..- .....++||++++..+-.|..++..++++|++++.+|
T Consensus 230 ~~~~~~~~~P~sl~ea~~ll~~~~-~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~l 308 (1332)
T 3unc_A 230 EGERVTWIQASTLKELLDLKAQHP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSV 308 (1332)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHCT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHHH
T ss_pred cCCceEEEccCCHHHHHHHHhhCC-CCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHHH
Confidence 345567999999997666654432 1346789998631100 1134689999985433233334567999999999999
Q ss_pred HHHHHhcC-------C-ccc---------ccCCCCCcceecccccCCC
Q 009201 192 VSFLDDHG-------F-IMP---------LDLGAKGSCQIGGNVSTNA 222 (540)
Q Consensus 192 ~~~l~~~G-------l-~lp---------~~~~s~~~~tvGG~ia~na 222 (540)
.+.+.+.= . .+| ..+.-.+.+||||+|++..
T Consensus 309 ~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~as 356 (1332)
T 3unc_A 309 EKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITAS 356 (1332)
T ss_dssp HHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCC
T ss_pred HHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccC
Confidence 98765320 0 011 0122234479999998754
No 37
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=87.68 E-value=0.32 Score=52.31 Aligned_cols=26 Identities=12% Similarity=0.155 Sum_probs=22.2
Q ss_pred HHHHHHHHHhHhcCCCCCCCCCcccC
Q 009201 509 KTVQLMSSIKKLLDPNGILNPYKVLP 534 (540)
Q Consensus 509 ~~~~~m~~IK~~~DP~giLNPGk~~~ 534 (540)
+.++.|++||++|||+|+|+-..-||
T Consensus 497 ~n~~RL~~iK~kyDP~~vF~~~qsI~ 522 (523)
T 2wdx_A 497 GNHPRLRKVKAAYDPRNHFHHALSIR 522 (523)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTCCC
T ss_pred HHHHHHHHHHHHhCcHhhcCCCCCCC
Confidence 57999999999999999998655444
No 38
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=70.86 E-value=1 Score=53.76 Aligned_cols=105 Identities=19% Similarity=0.191 Sum_probs=63.8
Q ss_pred CCccEEEecCCHHHHHHHhcCC-CceEEEEcCCCCCCC--CcccCCCcEEEEeCCCCCeEEeeCCCcEEEEcCCccHHHH
Q 009201 115 GSSKLLLQPRTTNEILKYCNSR-LLAVVPQGGNTGLVG--GSVPVFDEVIINMGSMNNIITFDKGSGVLVCEAGCILENL 191 (540)
Q Consensus 115 ~~p~~vv~P~s~~~iv~~a~~~-~~~v~~~GgGt~~~g--~~~~~~~gvvIdl~~ln~i~~id~~~~~v~v~aGv~~~~l 191 (540)
+.-...++|.|.++++++-.++ +.+ ...|||.+.- ..-...-.++||+.+...+..+...+..++++|+|++.++
T Consensus 238 g~~~~w~~P~tl~el~~l~~~~p~a~--lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 238 GERTTWIAPGTLNDLLELKMKHPSAP--LVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp CSSCEEEECSSHHHHHHHHHHCTTSC--BCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred CCCceEecCCCHHHHHHHHHHCCCCe--EEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 3345688999999666654443 233 3567776420 0001123589998875544444555667999999999999
Q ss_pred HHHHHhcCCcccc-----------------cCCCCCcceecccccCC
Q 009201 192 VSFLDDHGFIMPL-----------------DLGAKGSCQIGGNVSTN 221 (540)
Q Consensus 192 ~~~l~~~Gl~lp~-----------------~~~s~~~~tvGG~ia~n 221 (540)
.+.|.+.--.+|. .+.-.+.+||||+|++.
T Consensus 316 ~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~a 362 (1335)
T 3zyv_A 316 KNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISR 362 (1335)
T ss_dssp HHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTC
T ss_pred HHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceecc
Confidence 9988652111110 01113457999999864
No 39
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=70.79 E-value=1.5 Score=46.36 Aligned_cols=26 Identities=12% Similarity=0.221 Sum_probs=21.9
Q ss_pred HHHHHHHHHhHhcCCCCCCCCCcccC
Q 009201 509 KTVQLMSSIKKLLDPNGILNPYKVLP 534 (540)
Q Consensus 509 ~~~~~m~~IK~~~DP~giLNPGk~~~ 534 (540)
++++.|++||++|||+|+|+-..-||
T Consensus 445 ~n~~RL~~vK~kyDP~n~F~~~qsI~ 470 (473)
T 3rja_A 445 ENLARLQKLKAKFDPTDRFYYPQAVR 470 (473)
T ss_dssp GGHHHHHHHHHHHCTTCTTCCTTSCC
T ss_pred HHHHHHHHHhhccCchhhCCCCcCCC
Confidence 57999999999999999998554444
No 40
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=67.75 E-value=2 Score=45.81 Aligned_cols=27 Identities=26% Similarity=0.496 Sum_probs=22.9
Q ss_pred HHHHHHHHHhHhcCCCCCCCCCcccCC
Q 009201 509 KTVQLMSSIKKLLDPNGILNPYKVLPH 535 (540)
Q Consensus 509 ~~~~~m~~IK~~~DP~giLNPGk~~~~ 535 (540)
++++.|++||++|||+|+|+-..-|||
T Consensus 467 ~n~~RL~~vK~~yDP~n~F~~~qsI~p 493 (495)
T 3fw9_A 467 SNYERLIRAKTLIDPNNVFNHPQSIPP 493 (495)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred hHHHHHHHHHHhhCcHhhCCCCCCCCC
Confidence 579999999999999999986555554
No 41
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=52.18 E-value=1e+02 Score=32.93 Aligned_cols=56 Identities=11% Similarity=0.213 Sum_probs=35.6
Q ss_pred HHHHHHHHHHh-cCC---eEEeecCCc--hh------hhhhhhcc----C-----CHHHHHHHHHHhHhcCCCCCCC
Q 009201 473 IEPYVYEWTSE-HRG---SISAEHGLG--LM------KANKIFYS----K-----SPKTVQLMSSIKKLLDPNGILN 528 (540)
Q Consensus 473 ~~~~v~~~~~~-~gG---sis~eHGiG--~~------k~~~l~~~----~-----~~~~~~~m~~IK~~~DP~giLN 528 (540)
...++..++.+ ++| ++-.|-|-+ .. -.+.+... | +.+.++.++++++.+||+++|.
T Consensus 455 ~~~~~E~~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~DP~~~F~ 531 (540)
T 3js8_A 455 FYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDAAKAALAAYDPYRLFS 531 (540)
T ss_dssp HHHHHHHHHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHHHHHHHHhcCCCcccC
Confidence 34455666666 888 445555655 11 12344433 4 2246999999999999999973
No 42
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=24.64 E-value=1.2e+02 Score=24.51 Aligned_cols=46 Identities=20% Similarity=0.227 Sum_probs=34.4
Q ss_pred chhhhhhccCCCeeEEEEEEEEeccC-CcceeEEEeecCCHHHHHHHHHHH
Q 009201 264 DLKHLFIGSEGSLGIVTKVSIHTPPK-LSSVNLAFLACKDYFSCQKLLREA 313 (540)
Q Consensus 264 dL~~~~~Gs~G~lGIIt~~~l~l~p~-p~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+|..+| ..+|-|.++.+-..+. -......++.|.+.+++.+|+..+
T Consensus 22 ~L~~~F----~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~l 68 (110)
T 3s8s_A 22 FLKDMC----RKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNL 68 (110)
T ss_dssp HHHHHH----TTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHH----HhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHHh
Confidence 676766 3567889988876665 345677889999999998887655
No 43
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=20.60 E-value=1.4e+02 Score=23.25 Aligned_cols=46 Identities=20% Similarity=0.286 Sum_probs=33.7
Q ss_pred chhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHHHHHHHH
Q 009201 264 DLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQKLLREA 313 (540)
Q Consensus 264 dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+|..+|. .+|-|.++.+...+........++.|.+.+++.+++..+
T Consensus 45 ~l~~~F~----~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~l 90 (107)
T 3ulh_A 45 DIQELFA----EFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQY 90 (107)
T ss_dssp HHHHHHH----TTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----hcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHHh
Confidence 6666664 356788888876664445667889999999998887654
No 44
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=20.38 E-value=1.6e+02 Score=22.92 Aligned_cols=46 Identities=22% Similarity=0.341 Sum_probs=33.0
Q ss_pred chhhhhhccCCCeeEEEEEEEEeccCCcceeEEEeecCCHHHHHHHHHHH
Q 009201 264 DLKHLFIGSEGSLGIVTKVSIHTPPKLSSVNLAFLACKDYFSCQKLLREA 313 (540)
Q Consensus 264 dL~~~~~Gs~G~lGIIt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~ 313 (540)
+|..+|. .+|-|.++.+...+.-......++.|.+.+++.+++..+
T Consensus 31 ~l~~~F~----~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~l 76 (105)
T 2dnh_A 31 DVLRLFQ----PFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 76 (105)
T ss_dssp HHHHHHT----TTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHHH
T ss_pred HHHHHHH----hcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHHH
Confidence 6666663 456688888766654444667889999999988887654
Done!