BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009204
(540 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54NS3|Y5095_DICDI TPR repeat-containing protein DDB_G0285095 OS=Dictyostelium
discoideum GN=DDB_G0285095 PE=4 SV=1
Length = 263
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 430 VAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDL 489
+A + ++ LLL+YA F+ + + D+AE+ +KR + S +E+L +Y FL V+KD+
Sbjct: 155 IALDEDDSSLLLSYAIFIQ-KSGEIDKAEKLYKRIVTSGARSSESLGRYGLFLLEVKKDV 213
Query: 490 WAAEETYQQAMAAEPNSSSYASKYASFL 517
+ A +P S + ++Y+++L
Sbjct: 214 EKGGIYLKDAADIDPPSPEWCTRYSNYL 241
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 429 GVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD 488
G+ E+P + LL Y L + K+ + AEE ++A++ D ++ A Y +FL
Sbjct: 79 GLQEQPQDSDLLAQYGVLLSMEGKNKE-AEESLRKAVEVDTDNSRAWQAYGEFLERTNNP 137
Query: 489 LWAAE---ETYQQA---MAAEPNSSSYASKYASFLWNTG 521
A E E Y+ A +A + + SS YA F+ +G
Sbjct: 138 KKAKEVYGEAYKHAAPKIALDEDDSSLLLSYAIFIQKSG 176
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 421 RTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYAD 480
+ + LY+ V + L Y FL V KD ++ K A DPP E ++Y++
Sbjct: 180 KAEKLYKRIVTSGARSSESLGRYGLFLLEVKKDVEKGGIYLKDAADIDPPSPEWCTRYSN 239
Query: 481 FLWLVRKDLWAAEETYQQAMA 501
+L +KD + A + YQ+ ++
Sbjct: 240 YLKTYKKDEFEATK-YQKRVS 259
>sp|B4P0E1|FICD_DROYA Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila yakuba GN=GE13868 PE=3 SV=1
Length = 495
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 435 NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494
N L+ L AQ ++L KD D+A F+ A+ P E L +Y +FL ++++ A++
Sbjct: 119 NEALVSLRMAQDMYLAGKD-DKASRLFEHALALAPRHPEVLLRYGEFLEHSQRNIVLADQ 177
Query: 495 TYQQAMAAEPNSS 507
Y QA+ P++S
Sbjct: 178 YYFQALTISPSNS 190
>sp|B3N5J3|FICD_DROER Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila erecta GN=GG10411 PE=3 SV=1
Length = 495
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 435 NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494
N L+ L AQ ++L KD D+A F+ A+ P E L +Y +FL ++++ A++
Sbjct: 119 NEALVSLRMAQDMYLTGKD-DKAARLFEHALALAPRHPEVLLRYGEFLEHNQRNIVLADQ 177
Query: 495 TYQQAMAAEPNSS 507
Y QA+ P++S
Sbjct: 178 YYFQALTISPSNS 190
>sp|Q29JP8|FICD_DROPS Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila pseudoobscura pseudoobscura GN=GA21854
PE=3 SV=2
Length = 508
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 431 AEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD 488
AE+ N L L AQ +HL KD D+A F+ A+ P E L +Y +FL +++
Sbjct: 124 AEQTNIKEALGALRLAQDMHLSGKD-DKASRLFEHALALAPKHPEVLLRYGEFLEHNQRN 182
Query: 489 LWAAEETYQQAMAAEPNSS 507
+ A++ Y QA+ P++S
Sbjct: 183 IVLADQYYFQALTLCPSNS 201
>sp|B4GJC1|FICD_DROPE Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila persimilis GN=GL25530 PE=3 SV=1
Length = 508
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 431 AEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD 488
AE+ N L L AQ +HL KD D+A F+ A+ P E L +Y +FL +++
Sbjct: 124 AEQTNIKEALGALRLAQDMHLSGKD-DKASRLFEHALALAPKHPEVLLRYGEFLEHNQRN 182
Query: 489 LWAAEETYQQAMAAEPNSS 507
+ A++ Y QA+ P++S
Sbjct: 183 IVLADQYYFQALTLCPSNS 201
>sp|B0W429|FICD_CULQU Adenosine monophosphate-protein transferase FICD homolog OS=Culex
quinquefasciatus GN=CPIJ001789 PE=3 SV=1
Length = 500
Score = 38.9 bits (89), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 441 LNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500
L A + L+ KD D+A F+ A+ P E L++Y +FL ++D+ A+ Y QA+
Sbjct: 126 LKVAVEMKLMGKD-DKALRLFQHAMALSPRHPEILTKYGEFLEHSQQDIVTADHYYYQAL 184
Query: 501 AAEPNSS 507
P+ S
Sbjct: 185 TVNPSHS 191
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALS 476
L+Q +A P +P +L Y +FL +D A+ + +A+ +P +EAL+
Sbjct: 144 LFQHAMALSPRHPEILTKYGEFLEHSQQDIVTADHYYYQALTVNPSHSEALA 195
>sp|A7SVT1|FICD_NEMVE Adenosine monophosphate-protein transferase FICD homolog
OS=Nematostella vectensis GN=v1g194069 PE=3 SV=1
Length = 427
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALS 476
L+Q V+ P++P +LL Y +FL D +AE + RA+ ++P D+ AL+
Sbjct: 99 LFQQAVSLAPHHPEILLQYGEFLE--QHDVVQAEHLYNRALTANPLDSRALA 148
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 454 YDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS 507
+ +A + F++A+ P E L QY +FL + D+ AE Y +A+ A P S
Sbjct: 93 HSKAVKLFQQAVSLAPHHPEILLQYGEFLE--QHDVVQAEHLYNRALTANPLDS 144
>sp|B4Q4M7|FICD_DROSI Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila simulans GN=GD23409 PE=3 SV=1
Length = 492
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 441 LNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500
L AQ L+L KD D+A F+ A+ P E L +Y +FL ++++ A++ Y QA+
Sbjct: 122 LRMAQDLYLAGKD-DKAARLFEHALALAPRHPEVLLRYGEFLEHNQRNIVLADQYYFQAL 180
Query: 501 AAEPNSS 507
P++S
Sbjct: 181 TISPSNS 187
>sp|B4I1V5|FICD_DROSE Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila sechellia GN=GM18629 PE=3 SV=1
Length = 492
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 441 LNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500
L AQ L+L KD D+A F+ A+ P E L +Y +FL ++++ A++ Y QA+
Sbjct: 122 LRMAQDLYLAGKD-DKAARLFEHALALAPRHPEVLLRYGEFLEHNQRNIVLADQYYFQAL 180
Query: 501 AAEPNSS 507
P++S
Sbjct: 181 TISPSNS 187
>sp|Q8SWV6|FICD_DROME Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila melanogaster GN=CG9523 PE=1 SV=1
Length = 492
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 441 LNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500
L AQ L+L KD D+A F+ A+ P E L +Y +FL ++++ A++ Y QA+
Sbjct: 122 LRMAQDLYLAGKD-DKAARLFEHALALAPRHPEVLLRYGEFLEHNQRNIVLADQYYFQAL 180
Query: 501 AAEPNSS 507
P++S
Sbjct: 181 TISPSNS 187
>sp|B4JBN5|FICD_DROGR Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila grimshawi GN=GH10751 PE=3 SV=1
Length = 483
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 447 LHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEP-N 505
+H+ KD D+A F+ A+ P E L +Y +FL ++++ A++ Y QA++ P N
Sbjct: 117 MHISGKD-DKAARLFEHALALAPKHPEVLLRYGEFLEHNQRNIVLADQYYFQALSISPSN 175
Query: 506 SSSYASK 512
S ++A++
Sbjct: 176 SEAFANR 182
>sp|B4KFW6|FICD_DROMO Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila mojavensis GN=GI11595 PE=3 SV=1
Length = 502
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 431 AEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD 488
AEE N + L AQ +++ KD D+A F+ A+ P E L +Y +FL +++
Sbjct: 114 AEETNIKEAMGALRLAQEMYMTGKD-DKAARLFEHALALAPKHPEVLLRYGEFLEHNQRN 172
Query: 489 LWAAEETYQQAMAAEPNSS 507
+ A++ Y QA++ P+++
Sbjct: 173 IVLADQYYFQALSINPSNT 191
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALS---QYADF 481
L++ +A P +P +LL Y +FL ++ A++ + +A+ +P + EAL+ + AD
Sbjct: 144 LFEHALALAPKHPEVLLRYGEFLEHNQRNIVLADQYYFQALSINPSNTEALANRQRTADV 203
Query: 482 LWLVRKDLWAAEETYQQAMAA--EPNSSSYASK---YASFLWNTGGEE 524
+ L+ + ++ + + A++A E NS+ +K Y ++++ G E
Sbjct: 204 VQLLDERRLSSLDEKRDALSAIHEANSALRRAKKEAYFQHIYHSVGIE 251
>sp|B4LQT7|FICD_DROVI Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila virilis GN=GJ12914 PE=3 SV=1
Length = 485
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 441 LNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500
L AQ +++ KD D+A F+ A+ P E L +Y +FL ++++ A++ Y QA+
Sbjct: 111 LRLAQEMYMAGKD-DKAARLFEHALALAPKHPEVLLRYGEFLEHNQRNIVLADQYYFQAL 169
Query: 501 AAEPNSS 507
P++S
Sbjct: 170 CISPSNS 176
>sp|Q17A75|FICD_AEDAE Adenosine monophosphate-protein transferase FICD homolog OS=Aedes
aegypti GN=AAEL005383 PE=3 SV=1
Length = 499
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 455 DRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS 507
D+A F+ A+ P E L++Y +FL ++D+ A+ Y QA+ P+ S
Sbjct: 143 DKAARLFQHALALSPKHPEILTKYGEFLEHNQQDVVRADHYYYQALTVNPSHS 195
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALS 476
L+Q +A P +P +L Y +FL +D RA+ + +A+ +P +EAL+
Sbjct: 148 LFQHALALSPKHPEILTKYGEFLEHNQQDVVRADHYYYQALTVNPSHSEALA 199
>sp|B4MUQ2|FICD_DROWI Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila willistoni GN=GK14760 PE=3 SV=1
Length = 498
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 431 AEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD 488
AEE N L L AQ +++ KD D+A F+ A+ P E L +Y +FL +++
Sbjct: 118 AEETNIKEALSSLRLAQDMYMAGKD-DKAARLFEHALALAPRHPEVLLRYGEFLEHNQRN 176
Query: 489 LWAAEETYQQAMAAEPNSS 507
+ A++ Y QA+ P+ S
Sbjct: 177 IVLADQYYFQALTINPSHS 195
>sp|B3MK83|FICD_DROAN Adenosine monophosphate-protein transferase FICD homolog
OS=Drosophila ananassae GN=GF14521 PE=3 SV=1
Length = 497
Score = 37.0 bits (84), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 431 AEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD 488
AEE N L L AQ ++L KD D+A F+ ++ P L +Y +FL +++
Sbjct: 115 AEETNIKEALGALRLAQDMYLAGKD-DKAARLFQHSLALAPRHPTVLLRYGEFLEHSQRN 173
Query: 489 LWAAEETYQQAMAAEPNSS 507
+ A++ Y QA++ P++S
Sbjct: 174 IVLADQYYFQALSISPSNS 192
Score = 34.3 bits (77), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALS 476
L+Q +A P +P +LL Y +FL ++ A++ + +A+ P ++EAL+
Sbjct: 145 LFQHSLALAPRHPTVLLRYGEFLEHSQRNIVLADQYYFQALSISPSNSEALA 196
>sp|Q6YZI0|SPY_ORYSJ Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Oryza sativa
subsp. japonica GN=SPY PE=3 SV=1
Length = 927
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 456 RAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYAS 515
+A ECF A++ DP +A AL+ Y ++ L A E YQ+A A+P+ A A
Sbjct: 86 QAIECFNEAVRIDPGNACALT-YCGMIYKDEGHLVEAAEAYQKARNADPSYKPAAEFLAI 144
Query: 516 FLWNTG 521
L + G
Sbjct: 145 VLTDLG 150
>sp|Q6PGP7|TTC37_HUMAN Tetratricopeptide repeat protein 37 OS=Homo sapiens GN=TTC37 PE=1
SV=1
Length = 1564
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 446 FLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV----RKD 488
+H KDY +AE+CF+RA++ D AE Q W + RKD
Sbjct: 428 LIHFTKKDYLQAEKCFQRALEKDTEVAEYHYQLGLTYWFMGEETRKD 474
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 421 RTDLLYQMGVAEEPNNP---------LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD 471
R +Y+ +A+ P++ L L YA F + T+DYDR E +K AI P
Sbjct: 361 RVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALVPHR 420
Query: 472 ----AEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYAS 511
A+ QYA F + R +L AA + A+ P ++S
Sbjct: 421 RFTFAKLWVQYARFE-VRRLELTAARKILGAAIGMAPKLKLFSS 463
>sp|O82422|SPY_HORVU Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Hordeum
vulgare GN=SPY PE=2 SV=1
Length = 944
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 456 RAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYAS 515
+A +CF A++ DP +A AL+ + ++ L A E YQ+A +A+P+ + + A
Sbjct: 86 QALDCFTEAVKVDPKNACALT-HCGMIYKDEGHLVEAAEAYQKARSADPSYKAASEFLAI 144
Query: 516 FLWNTGGEETCFPLSSSQDD 535
L + G T L+ + +D
Sbjct: 145 VLTDLG---TSLKLAGNTED 161
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEEC---FKRAIQSDPPDAEALSQYADF 481
L++ GV P+N + NYA FL KD R +E ++ A++ P A AL+
Sbjct: 531 LFRSGVQTLPHNAKVHYNYANFL----KDQGRNKEAIYHYRTALKLYPRHASALNN---- 582
Query: 482 LWLVRKDLWAAEETYQQAMAAEP 504
L + KD+ A+ YQ+A+ P
Sbjct: 583 LGTLTKDMAEAKMYYQKALQLHP 605
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEEC---FKRAIQSDPPDAEA 474
D + YQ + P + L N L K ++ EE K +I+ P A+A
Sbjct: 589 DMAEAKMYYQKALQLHPQHNRALFNLGNLL----KSQEKTEEAIMLLKESIKYGPDFADA 644
Query: 475 LSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524
S A L ++ AE+ YQ + P+SS + YA FL ++G E
Sbjct: 645 YSSLASLL-AEQERFKEAEDIYQAGIKNCPDSSDLHNNYAVFLVDSGFPE 693
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEEC---FKRAIQSDPPDAEA 474
D + YQ + P + L N L K ++ EE K +I+ P A+A
Sbjct: 529 DTAEAKMYYQRALQLHPQHNRALFNLGNLL----KSQEKKEEAITLLKDSIKYGPEFADA 584
Query: 475 LSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524
S A L ++ AEE YQ + P+SS + Y FL +TG E
Sbjct: 585 YSSLASLL-AEQERFKEAEEIYQTGIKNCPDSSDLHNNYGVFLVDTGLPE 633
Score = 32.3 bits (72), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 425 LYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEEC---FKRAIQSDPPDAEALSQYADF 481
L++ GV P+N + NYA FL KD R +E ++ A++ P A AL+
Sbjct: 471 LFRSGVQTLPHNAKVHYNYANFL----KDQGRNKEAIYHYRTALKLYPRHASALNN---- 522
Query: 482 LWLVRKDLWAAEETYQQAMAAEP 504
L + +D A+ YQ+A+ P
Sbjct: 523 LGTLTRDTAEAKMYYQRALQLHP 545
>sp|P41889|CUT9_SCHPO Anaphase-promoting complex subunit cut9 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cut9 PE=1 SV=2
Length = 671
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 453 DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASK 512
++DRA+EC+K A+ D EA Q LV L A+E + + + N S+Y+ +
Sbjct: 215 NFDRAKECYKEALMVDAKCYEAFDQ------LVSNHLLTADEEWD--LVLKLNYSTYSKE 266
Query: 513 YASFL 517
A+FL
Sbjct: 267 DAAFL 271
>sp|A6W972|PAFA_KINRD Pup--protein ligase OS=Kineococcus radiotolerans (strain ATCC
BAA-149 / DSM 14245 / SRS30216) GN=pafA PE=3 SV=1
Length = 453
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 308 TMKNLLLSISDIGNDGDGKKVSRISSGNADKRFSRSSPSIQYPSFIPYEMSEVSSGKQFP 367
TM+N + +I +I +D G+K R+++G S+ IQ + S G Q P
Sbjct: 244 TMENPIRAIREISHDMTGRKPVRLANGR-----EASALEIQEEYLEKAKEFVESRGLQTP 298
Query: 368 MNKEELDLWNSVLDEALRIQEESEYRILDHET 399
K LDLW + ALR ++ ++D E
Sbjct: 299 TIKRVLDLW----ERALRAVATQDFSLVDREV 326
>sp|Q9P7X2|ELL1_SCHPO RNA polymerase II elongation factor ell1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ell1 PE=1 SV=1
Length = 533
Score = 33.9 bits (76), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 271 NNVGFAASLSPGSSETITETISLTGEKDQETSEIDSSTMKNLLLSISDIGNDGDGKKVSR 330
N ++ LSP S + +S TG E+S + S NL ISDI + G S
Sbjct: 349 NASNYSPLLSPSSHRKTSGNLSRTGS---ESSAVSLSDTTNLNTPISDIPSPGSSTTCSN 405
Query: 331 ISSGNADKRFSRSSP 345
+SS + KR SRS P
Sbjct: 406 LSSPHI-KRKSRSPP 419
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQSDP 469
L L YA F + TKDYDRA + +K A++ P
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVP 413
>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus
GN=Tmtc3 PE=2 SV=2
Length = 920
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 408 TVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLL--LLNY-----------AQFLHLVTKDY 454
+KL+PD F LLY E P+L LL Y L KD
Sbjct: 699 AIKLQPDFRSALFNLALLYSQTAKELKALPILEELLKYYPDHTKGLILKGDILMNQKKDI 758
Query: 455 DRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPN 505
A++CF++ ++ DP + + ++ K+L AE + +A P+
Sbjct: 759 PGAKKCFEKILEMDPSNVQGKHNLC-VVYFEEKELLKAERCLVETLALAPH 808
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQSDP 469
L L YA F + TKDYDRA + +K A++ P
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVP 413
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQSDP 469
L L YA F + TKDYDRA + +K A++ P
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVP 413
>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens
GN=TMTC3 PE=1 SV=2
Length = 915
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 409 VKLEPDDYMDYFRTDLLYQMGVAEEPNNPLL--LLNY-----------AQFLHLVTKDYD 455
+KL+ D F LLY E P+L LL Y L KD
Sbjct: 696 IKLQADFRSALFNLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDILMNQKKDIL 755
Query: 456 RAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPN 505
A++CF+R ++ DP + + ++ KDL AE + +A P+
Sbjct: 756 GAKKCFERILEMDPSNVQGKHNLC-VVYFEEKDLLKAERCLLETLALAPH 804
>sp|P58938|BCSC_XANAC Cellulose synthase operon protein C OS=Xanthomonas axonopodis pv.
citri (strain 306) GN=bcsC PE=3 SV=1
Length = 1508
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDP--PDAE 473
Y++ R+ Y+ A +P P L L Y Q L ++RA + +R SDP P +
Sbjct: 135 YVEAARS---YEAAFAGKPPPPNLALEYYQSLAGTPTGWERARDGLRRLQSSDPDNPSVQ 191
Query: 474 -ALSQYADFLWLVRKDLWAAEETY-QQAMAAEPNSSSYASKYASFLWNTGG 522
AL+Q + R+D A T Q+A P SS+ + LW G
Sbjct: 192 LALAQVLSYREPTRRDGIAQLRTLAQRADVGGPARSSWRQ---ALLWLNAG 239
>sp|Q5BDL3|ERB1_EMENI Ribosome biogenesis protein erb1 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=erb1 PE=3 SV=2
Length = 793
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 282 GSSETITETISLTGEKDQETSEIDSSTMKNLLLSISD----IGNDGDGKKVSRISSGNAD 337
G+ + + I+ D + +S+T+ N+ LS D IG D +GKK+ R + G A
Sbjct: 127 GNDRYVYDEINPDDNSDYSDVDENSNTIGNIPLSFYDQYPHIGYDINGKKILRPAKGEA- 185
Query: 338 KRFSRSSPSIQYPSFIPYEMSEVSSGKQFPMNKEELDLWNSVLDEALRIQEESEYRILDH 397
SI+ P +++ S+GK ++++EL+L V + +E + Y L
Sbjct: 186 --LDALLDSIEIPKGW-TGLTDPSTGKPLELSQDELELLRKVQMNEIPDEEYNPYEPLTE 242
Query: 398 E-TMQHFVTPVTVKLEP 413
T + + P++ EP
Sbjct: 243 WFTTEKEIMPLSAAPEP 259
>sp|Q54MD1|PEX5_DICDI Peroxisomal targeting signal 1 receptor OS=Dictyostelium discoideum
GN=pex5 PE=3 SV=1
Length = 641
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 411 LEPDDYMDY-----FRTDLLYQMGVAEEPNNPLLLLNYA-QFLHLVTKDYDRAEECFKRA 464
++P+ ++D F T+L + + P+NP + A L+ ++ DYD+A +CFK A
Sbjct: 471 VDPNSFLDTWSRHEFTTNLFIEAARSR-PSNPDPEVQTALGLLYNMSYDYDKAVDCFKAA 529
Query: 465 IQSDPPD 471
+Q+ P D
Sbjct: 530 LQNSPTD 536
>sp|A8X181|FICD_CAEBR Adenosine monophosphate-protein transferase FICD homolog
OS=Caenorhabditis briggsae GN=CBG05963 PE=3 SV=1
Length = 507
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 421 RTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEAL 475
R + + +A PNNP +L+ Q + + A++C+ +A+ DP ++EAL
Sbjct: 164 RAVTIMEHAMALAPNNPQILIEMGQIREM-HNELVEADQCYVKALAYDPGNSEAL 217
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 198,650,169
Number of Sequences: 539616
Number of extensions: 8171471
Number of successful extensions: 22062
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 21989
Number of HSP's gapped (non-prelim): 101
length of query: 540
length of database: 191,569,459
effective HSP length: 122
effective length of query: 418
effective length of database: 125,736,307
effective search space: 52557776326
effective search space used: 52557776326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)