Query 009204
Match_columns 540
No_of_seqs 215 out of 1354
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 21:11:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.7 3E-17 1E-21 140.9 14.4 120 393-517 6-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.7 2.4E-16 8.3E-21 138.2 9.5 123 395-522 26-149 (150)
3 2pl2_A Hypothetical conserved 99.6 2.6E-15 8.9E-20 138.2 13.4 143 378-526 13-170 (217)
4 4gyw_A UDP-N-acetylglucosamine 99.6 3E-15 1E-19 165.8 15.7 144 377-525 16-163 (723)
5 4ga2_A E3 SUMO-protein ligase 99.6 6.5E-15 2.2E-19 129.1 14.7 109 415-525 9-117 (150)
6 4gyw_A UDP-N-acetylglucosamine 99.6 2.2E-15 7.5E-20 166.9 14.0 123 398-525 7-129 (723)
7 2pl2_A Hypothetical conserved 99.6 7.7E-15 2.6E-19 135.1 13.6 109 417-528 98-206 (217)
8 3gyz_A Chaperone protein IPGC; 99.6 1.3E-15 4.3E-20 137.0 7.7 110 393-507 29-138 (151)
9 2vyi_A SGTA protein; chaperone 99.6 4.8E-14 1.6E-18 113.1 16.1 107 416-524 25-131 (131)
10 3urz_A Uncharacterized protein 99.6 7.7E-15 2.6E-19 134.2 12.8 106 416-523 17-138 (208)
11 3upv_A Heat shock protein STI1 99.6 5.3E-14 1.8E-18 116.8 14.6 103 415-519 16-124 (126)
12 3gyz_A Chaperone protein IPGC; 99.6 4.1E-14 1.4E-18 127.1 14.8 104 420-525 19-122 (151)
13 2lni_A Stress-induced-phosphop 99.6 3.9E-14 1.3E-18 115.1 13.2 105 416-522 29-133 (133)
14 2vgx_A Chaperone SYCD; alterna 99.6 5.2E-15 1.8E-19 130.0 7.9 113 394-511 15-127 (148)
15 3sz7_A HSC70 cochaperone (SGT) 99.5 5.1E-14 1.7E-18 122.6 13.5 101 416-518 24-124 (164)
16 3vtx_A MAMA; tetratricopeptide 99.5 2E-13 6.9E-18 119.3 16.7 109 415-525 51-159 (184)
17 2h6f_A Protein farnesyltransfe 99.5 2.9E-14 9.9E-19 146.0 12.7 154 368-526 92-254 (382)
18 4gco_A Protein STI-1; structur 99.5 2.9E-14 9.9E-19 122.3 10.3 96 428-525 4-99 (126)
19 3vtx_A MAMA; tetratricopeptide 99.5 1.9E-13 6.6E-18 119.4 15.2 108 416-525 18-125 (184)
20 1na0_A Designed protein CTPR3; 99.5 4.5E-13 1.5E-17 106.6 15.8 104 416-521 22-125 (125)
21 2e2e_A Formate-dependent nitri 99.5 3.6E-14 1.2E-18 124.1 10.3 110 415-525 22-133 (177)
22 2vgx_A Chaperone SYCD; alterna 99.5 9.1E-14 3.1E-18 122.0 12.6 102 422-525 6-107 (148)
23 4i17_A Hypothetical protein; T 99.5 1.6E-13 5.6E-18 124.2 14.6 109 415-525 19-135 (228)
24 3k9i_A BH0479 protein; putativ 99.5 3.6E-14 1.2E-18 117.9 9.3 108 416-525 3-113 (117)
25 2xcb_A PCRH, regulatory protei 99.5 8.9E-14 3.1E-18 119.3 12.0 118 394-516 12-129 (142)
26 2xcb_A PCRH, regulatory protei 99.5 2.4E-14 8.3E-19 122.8 8.4 100 424-525 5-104 (142)
27 1a17_A Serine/threonine protei 99.5 2E-13 6.9E-18 115.3 13.4 108 416-525 26-135 (166)
28 1elw_A TPR1-domain of HOP; HOP 99.5 5E-13 1.7E-17 105.7 14.8 100 416-517 17-116 (118)
29 2fo7_A Synthetic consensus TPR 99.5 4.9E-13 1.7E-17 106.8 14.2 109 416-526 14-122 (136)
30 2h6f_A Protein farnesyltransfe 99.5 1.5E-13 5E-18 140.8 13.6 104 417-521 180-288 (382)
31 3as5_A MAMA; tetratricopeptide 99.5 8.1E-13 2.8E-17 111.7 15.2 110 415-526 54-163 (186)
32 1hxi_A PEX5, peroxisome target 99.5 1.6E-13 5.4E-18 116.7 10.7 91 416-508 30-120 (121)
33 3rkv_A Putative peptidylprolyl 99.5 1.8E-13 6.3E-18 118.9 11.1 106 416-523 24-148 (162)
34 2dba_A Smooth muscle cell asso 99.5 7.7E-13 2.6E-17 109.6 14.1 102 416-519 41-145 (148)
35 1p5q_A FKBP52, FK506-binding p 99.5 2.9E-13 9.8E-18 134.1 13.3 108 416-525 160-282 (336)
36 2fbn_A 70 kDa peptidylprolyl i 99.5 4.6E-13 1.6E-17 120.0 13.3 108 416-525 51-174 (198)
37 4eqf_A PEX5-related protein; a 99.5 5.2E-13 1.8E-17 128.2 13.9 109 415-525 189-299 (365)
38 1zu2_A Mitochondrial import re 99.5 2.7E-13 9.1E-18 126.1 11.5 101 415-516 14-134 (158)
39 4i17_A Hypothetical protein; T 99.4 3.5E-13 1.2E-17 122.0 11.2 107 415-523 54-169 (228)
40 4gcn_A Protein STI-1; structur 99.4 1.3E-12 4.3E-17 111.7 13.2 97 415-514 20-123 (127)
41 3q49_B STIP1 homology and U bo 99.4 1.4E-12 4.9E-17 108.0 13.0 102 416-519 22-128 (137)
42 3as5_A MAMA; tetratricopeptide 99.4 1.1E-12 3.7E-17 111.0 12.2 109 416-526 21-129 (186)
43 2q7f_A YRRB protein; TPR, prot 99.4 2.5E-12 8.6E-17 114.7 15.2 110 415-526 103-212 (243)
44 1w3b_A UDP-N-acetylglucosamine 99.4 1.8E-12 6.3E-17 125.8 15.2 110 415-526 215-324 (388)
45 1wao_1 Serine/threonine protei 99.4 1.1E-12 3.8E-17 137.0 14.5 114 414-529 17-132 (477)
46 2q7f_A YRRB protein; TPR, prot 99.4 3.1E-12 1.1E-16 114.2 15.3 109 416-526 70-178 (243)
47 1w3b_A UDP-N-acetylglucosamine 99.4 2.1E-12 7.3E-17 125.3 15.5 110 415-526 249-358 (388)
48 2xev_A YBGF; tetratricopeptide 99.4 5.3E-12 1.8E-16 103.5 15.3 105 416-522 15-125 (129)
49 3uq3_A Heat shock protein STI1 99.4 1.7E-12 5.7E-17 116.2 13.3 108 417-526 119-226 (258)
50 1fch_A Peroxisomal targeting s 99.4 2E-12 6.8E-17 122.9 14.3 109 416-526 230-349 (368)
51 1xnf_A Lipoprotein NLPI; TPR, 99.4 6.4E-13 2.2E-17 120.8 10.4 107 416-525 56-162 (275)
52 4abn_A Tetratricopeptide repea 99.4 8.9E-13 3E-17 136.4 12.1 109 417-527 193-312 (474)
53 2vq2_A PILW, putative fimbrial 99.4 5.5E-12 1.9E-16 110.6 15.2 108 416-525 55-165 (225)
54 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.1E-12 7.2E-17 114.7 12.4 105 416-525 19-139 (213)
55 2vsy_A XCC0866; transferase, g 99.4 1.1E-12 3.6E-17 136.7 12.2 128 395-527 18-148 (568)
56 1elr_A TPR2A-domain of HOP; HO 99.4 3.3E-12 1.1E-16 102.7 12.3 105 416-523 17-128 (131)
57 3upv_A Heat shock protein STI1 99.4 2E-12 6.7E-17 107.3 11.2 91 434-526 1-91 (126)
58 2vsy_A XCC0866; transferase, g 99.4 2.7E-12 9.2E-17 133.7 14.9 132 378-514 31-169 (568)
59 4eqf_A PEX5-related protein; a 99.4 4.1E-12 1.4E-16 121.9 15.1 108 416-525 112-265 (365)
60 2r5s_A Uncharacterized protein 99.4 3E-13 1E-17 119.7 6.6 125 396-525 36-162 (176)
61 2pzi_A Probable serine/threoni 99.4 6.2E-13 2.1E-17 144.3 9.9 107 416-525 446-552 (681)
62 1fch_A Peroxisomal targeting s 99.4 2.9E-12 1E-16 121.7 13.3 109 416-526 194-304 (368)
63 2vq2_A PILW, putative fimbrial 99.4 4.8E-12 1.6E-16 110.9 13.5 109 416-526 21-132 (225)
64 3qou_A Protein YBBN; thioredox 99.4 3.1E-12 1.1E-16 123.3 13.2 108 416-525 130-273 (287)
65 3hym_B Cell division cycle pro 99.4 5.9E-12 2E-16 116.7 14.6 108 416-525 103-211 (330)
66 2ho1_A Type 4 fimbrial biogene 99.4 5.4E-12 1.9E-16 114.2 13.8 108 416-525 84-193 (252)
67 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 1.3E-12 4.6E-17 135.0 10.8 107 416-524 281-402 (457)
68 3cv0_A Peroxisome targeting si 99.4 6.1E-12 2.1E-16 116.5 13.9 109 416-526 185-305 (327)
69 3hym_B Cell division cycle pro 99.4 5.6E-12 1.9E-16 116.9 13.6 108 416-525 69-177 (330)
70 3cv0_A Peroxisome targeting si 99.4 6.5E-12 2.2E-16 116.3 13.7 110 415-526 150-259 (327)
71 3q49_B STIP1 homology and U bo 99.4 7.5E-12 2.6E-16 103.7 12.7 94 431-526 3-96 (137)
72 2ho1_A Type 4 fimbrial biogene 99.4 4.1E-12 1.4E-16 115.0 11.9 109 416-526 50-160 (252)
73 2kat_A Uncharacterized protein 99.4 6E-12 2E-16 103.3 11.8 101 421-523 3-105 (115)
74 3u4t_A TPR repeat-containing p 99.4 3.2E-12 1.1E-16 116.7 11.1 106 416-524 16-125 (272)
75 3urz_A Uncharacterized protein 99.4 1.1E-11 3.8E-16 113.2 14.8 69 415-484 66-134 (208)
76 4abn_A Tetratricopeptide repea 99.4 1.5E-12 5E-17 134.8 9.9 104 394-499 207-318 (474)
77 2pzi_A Probable serine/threoni 99.3 4.5E-12 1.5E-16 137.6 13.9 109 415-525 403-519 (681)
78 3sz7_A HSC70 cochaperone (SGT) 99.3 4.6E-12 1.6E-16 110.2 11.3 91 433-525 7-97 (164)
79 3u4t_A TPR repeat-containing p 99.3 7.8E-12 2.7E-16 114.1 13.2 105 416-522 87-191 (272)
80 1xnf_A Lipoprotein NLPI; TPR, 99.3 1.2E-11 3.9E-16 112.5 14.0 107 416-524 18-128 (275)
81 2kck_A TPR repeat; tetratricop 99.3 3.8E-12 1.3E-16 100.0 9.4 90 415-506 18-110 (112)
82 2kck_A TPR repeat; tetratricop 99.3 7.9E-12 2.7E-16 98.2 11.0 92 432-525 1-95 (112)
83 1ihg_A Cyclophilin 40; ppiase 99.3 2.8E-12 9.6E-17 130.0 10.6 108 416-525 236-359 (370)
84 3uq3_A Heat shock protein STI1 99.3 5.5E-12 1.9E-16 112.8 11.1 110 415-526 50-192 (258)
85 3mkr_A Coatomer subunit epsilo 99.3 1.8E-11 6E-16 119.0 14.8 106 417-524 144-251 (291)
86 2ond_A Cleavage stimulation fa 99.3 7.3E-12 2.5E-16 120.5 11.9 108 416-524 112-220 (308)
87 2hr2_A Hypothetical protein; a 99.3 4.3E-12 1.5E-16 118.0 9.9 96 416-513 24-142 (159)
88 3qky_A Outer membrane assembly 99.3 1E-11 3.6E-16 115.2 12.4 110 415-525 27-166 (261)
89 3ieg_A DNAJ homolog subfamily 99.3 1.2E-11 4.3E-16 115.2 13.0 108 416-525 16-138 (359)
90 2r5s_A Uncharacterized protein 99.3 5.3E-12 1.8E-16 111.6 9.8 108 416-525 19-126 (176)
91 1na3_A Designed protein CTPR2; 99.3 2.2E-11 7.6E-16 94.0 11.8 85 435-521 7-91 (91)
92 3ieg_A DNAJ homolog subfamily 99.3 3.1E-11 1E-15 112.6 14.7 107 417-525 85-206 (359)
93 2l6j_A TPR repeat-containing p 99.3 2.1E-11 7.3E-16 97.1 11.3 89 436-526 3-97 (111)
94 4gcn_A Protein STI-1; structur 99.3 1.3E-11 4.4E-16 105.4 10.0 89 436-526 7-102 (127)
95 2e2e_A Formate-dependent nitri 99.3 1.4E-11 4.6E-16 107.6 9.5 98 416-515 57-157 (177)
96 2ond_A Cleavage stimulation fa 99.3 1.5E-11 5.1E-16 118.3 10.7 104 420-525 81-187 (308)
97 3fp2_A TPR repeat-containing p 99.3 3.5E-11 1.2E-15 120.3 13.7 109 415-525 288-396 (537)
98 1p5q_A FKBP52, FK506-binding p 99.3 1.8E-12 6E-17 128.5 3.8 107 417-525 127-248 (336)
99 3edt_B KLC 2, kinesin light ch 99.3 1.3E-11 4.6E-16 111.1 9.1 146 370-525 18-187 (283)
100 1hxi_A PEX5, peroxisome target 99.3 2.1E-11 7.3E-16 103.5 9.9 85 439-525 19-103 (121)
101 2y4t_A DNAJ homolog subfamily 99.3 1.3E-10 4.6E-15 113.7 16.8 109 416-526 73-196 (450)
102 1hh8_A P67PHOX, NCF-2, neutrop 99.2 1E-10 3.6E-15 103.7 14.5 106 415-522 49-170 (213)
103 2xpi_A Anaphase-promoting comp 99.2 7.9E-11 2.7E-15 119.9 15.4 109 416-526 454-569 (597)
104 2if4_A ATFKBP42; FKBP-like, al 99.2 9.3E-12 3.2E-16 123.6 8.1 105 415-521 191-312 (338)
105 2xpi_A Anaphase-promoting comp 99.2 1.1E-10 3.6E-15 119.0 15.8 110 415-526 385-494 (597)
106 2lni_A Stress-induced-phosphop 99.2 3.8E-11 1.3E-15 97.3 10.0 91 433-525 12-102 (133)
107 3mkr_A Coatomer subunit epsilo 99.2 1E-10 3.5E-15 113.6 14.2 94 416-511 179-273 (291)
108 2y4t_A DNAJ homolog subfamily 99.2 9.1E-11 3.1E-15 114.9 13.6 109 416-526 39-162 (450)
109 2vyi_A SGTA protein; chaperone 99.2 5.6E-11 1.9E-15 95.1 9.9 93 431-525 6-98 (131)
110 2c2l_A CHIP, carboxy terminus 99.2 2.2E-11 7.5E-16 117.2 8.7 91 415-507 16-106 (281)
111 1elw_A TPR1-domain of HOP; HOP 99.2 1.6E-10 5.3E-15 91.2 11.6 88 436-525 3-90 (118)
112 1na0_A Designed protein CTPR3; 99.2 2.1E-10 7.2E-15 91.0 12.4 92 432-525 3-95 (125)
113 3edt_B KLC 2, kinesin light ch 99.2 6.9E-11 2.3E-15 106.5 10.7 125 397-526 82-271 (283)
114 2dba_A Smooth muscle cell asso 99.2 1.5E-10 5.2E-15 95.7 11.4 93 431-525 22-117 (148)
115 2yhc_A BAMD, UPF0169 lipoprote 99.2 1.1E-10 3.9E-15 107.3 11.6 109 416-525 54-202 (225)
116 3qky_A Outer membrane assembly 99.2 7.9E-11 2.7E-15 109.3 10.3 105 415-521 64-199 (261)
117 1qqe_A Vesicular transport pro 99.2 6.3E-11 2.1E-15 113.7 9.8 108 415-524 89-216 (292)
118 3fp2_A TPR repeat-containing p 99.2 1.2E-10 4.1E-15 116.4 12.2 108 416-526 256-363 (537)
119 2yhc_A BAMD, UPF0169 lipoprote 99.2 8.6E-11 3E-15 108.0 10.3 109 416-525 17-165 (225)
120 2fo7_A Synthetic consensus TPR 99.2 4.1E-10 1.4E-14 89.7 12.9 89 416-506 48-136 (136)
121 2fbn_A 70 kDa peptidylprolyl i 99.2 2.1E-11 7.2E-16 109.2 5.1 108 416-525 17-140 (198)
122 4g1t_A Interferon-induced prot 99.1 6.3E-10 2.2E-14 110.2 16.1 104 416-520 64-185 (472)
123 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 9.7E-12 3.3E-16 128.6 3.2 107 417-525 248-369 (457)
124 3ma5_A Tetratricopeptide repea 99.1 2.3E-10 8E-15 93.5 10.5 89 432-522 2-92 (100)
125 2gw1_A Mitochondrial precursor 99.1 1.3E-10 4.6E-15 114.7 10.8 110 415-526 350-468 (514)
126 1elr_A TPR2A-domain of HOP; HO 99.1 1.6E-10 5.5E-15 92.8 8.8 90 434-525 1-97 (131)
127 1qqe_A Vesicular transport pro 99.1 8.5E-11 2.9E-15 112.7 8.4 109 416-526 50-177 (292)
128 4g1t_A Interferon-induced prot 99.1 1.4E-10 4.7E-15 115.0 10.1 105 416-521 188-295 (472)
129 3rkv_A Putative peptidylprolyl 99.1 2.1E-10 7.1E-15 99.5 9.8 87 437-525 11-115 (162)
130 1a17_A Serine/threonine protei 99.1 5.9E-10 2E-14 93.9 12.2 88 436-525 12-99 (166)
131 2c2l_A CHIP, carboxy terminus 99.1 3.1E-10 1.1E-14 109.2 11.5 90 434-525 1-90 (281)
132 2gw1_A Mitochondrial precursor 99.1 9.3E-11 3.2E-15 115.9 7.9 109 415-525 282-390 (514)
133 2hr2_A Hypothetical protein; a 99.1 2.8E-10 9.6E-15 105.8 10.5 87 437-525 11-120 (159)
134 2xev_A YBGF; tetratricopeptide 99.1 4.2E-10 1.5E-14 92.1 9.8 86 438-525 3-94 (129)
135 2qfc_A PLCR protein; TPR, HTH, 99.1 1.5E-09 5E-14 103.5 13.5 110 415-526 127-255 (293)
136 2ooe_A Cleavage stimulation fa 99.0 7.2E-10 2.5E-14 114.2 11.7 109 415-524 333-442 (530)
137 2kc7_A BFR218_protein; tetratr 99.0 1.9E-10 6.5E-15 91.4 5.7 80 417-506 14-94 (99)
138 1ouv_A Conserved hypothetical 99.0 3.4E-09 1.2E-13 98.3 14.7 104 416-526 55-169 (273)
139 3nf1_A KLC 1, kinesin light ch 99.0 3.4E-10 1.2E-14 104.0 7.5 110 415-526 123-297 (311)
140 3nf1_A KLC 1, kinesin light ch 99.0 3.1E-10 1.1E-14 104.3 7.2 110 415-526 81-214 (311)
141 3ro3_A PINS homolog, G-protein 99.0 5.2E-10 1.8E-14 91.9 7.2 109 416-526 22-148 (164)
142 3u3w_A Transcriptional activat 99.0 8.1E-10 2.8E-14 105.3 9.1 109 415-525 127-255 (293)
143 3k9i_A BH0479 protein; putativ 99.0 1.6E-10 5.5E-15 95.8 3.6 75 451-526 3-80 (117)
144 4a1s_A PINS, partner of inscut 99.0 5.6E-10 1.9E-14 108.2 7.7 105 416-522 61-181 (411)
145 2l6j_A TPR repeat-containing p 99.0 3.5E-10 1.2E-14 90.0 4.2 82 415-498 16-103 (111)
146 3gw4_A Uncharacterized protein 99.0 7.8E-10 2.7E-14 96.5 6.7 109 416-526 39-166 (203)
147 3qou_A Protein YBBN; thioredox 99.0 3.5E-09 1.2E-13 101.9 11.9 92 433-526 113-238 (287)
148 3ulq_A Response regulator aspa 99.0 1.1E-09 3.8E-14 107.2 8.4 108 416-525 156-282 (383)
149 1ouv_A Conserved hypothetical 99.0 1.1E-08 3.8E-13 94.9 14.8 105 416-527 91-206 (273)
150 2kc7_A BFR218_protein; tetratr 98.9 8.1E-09 2.8E-13 81.9 11.4 84 441-526 4-90 (99)
151 3ro2_A PINS homolog, G-protein 98.9 1.2E-09 3.9E-14 100.0 7.2 106 415-522 17-138 (338)
152 3sf4_A G-protein-signaling mod 98.9 1.6E-09 5.6E-14 103.3 8.4 109 416-526 200-326 (406)
153 2ooe_A Cleavage stimulation fa 98.9 2.9E-09 1E-13 109.7 10.5 103 421-525 304-409 (530)
154 2qfc_A PLCR protein; TPR, HTH, 98.9 1.8E-08 6E-13 96.0 15.1 109 416-526 88-215 (293)
155 2ifu_A Gamma-SNAP; membrane fu 98.9 1.5E-09 5.1E-14 104.8 7.4 106 416-524 89-212 (307)
156 3ulq_A Response regulator aspa 98.9 1.2E-09 4E-14 107.0 6.7 110 415-526 115-243 (383)
157 3gw4_A Uncharacterized protein 98.9 3.4E-09 1.2E-13 92.4 8.8 109 416-526 5-126 (203)
158 3rjv_A Putative SEL1 repeat pr 98.9 1.1E-08 3.8E-13 94.0 11.9 100 417-520 67-175 (212)
159 3sf4_A G-protein-signaling mod 98.9 2.6E-09 9E-14 101.9 7.8 105 416-522 22-142 (406)
160 1na3_A Designed protein CTPR2; 98.9 1.7E-08 5.7E-13 77.7 10.8 68 416-484 22-89 (91)
161 4a1s_A PINS, partner of inscut 98.9 2E-09 7E-14 104.3 6.7 110 415-526 235-362 (411)
162 2ifu_A Gamma-SNAP; membrane fu 98.9 2.5E-09 8.5E-14 103.3 6.8 109 415-526 48-174 (307)
163 2if4_A ATFKBP42; FKBP-like, al 98.8 2.4E-09 8E-14 106.3 5.8 93 415-508 242-334 (338)
164 3ro2_A PINS homolog, G-protein 98.8 2.5E-09 8.7E-14 97.8 5.5 109 416-526 196-322 (338)
165 3rjv_A Putative SEL1 repeat pr 98.8 7.1E-09 2.4E-13 95.3 8.4 98 416-519 31-137 (212)
166 3u3w_A Transcriptional activat 98.8 9.6E-09 3.3E-13 97.8 9.4 109 416-526 88-215 (293)
167 2kat_A Uncharacterized protein 98.8 1.4E-08 4.9E-13 83.1 8.6 70 456-526 3-72 (115)
168 3q15_A PSP28, response regulat 98.8 7.5E-09 2.6E-13 101.6 7.9 109 415-525 153-279 (378)
169 1dce_A Protein (RAB geranylger 98.8 9E-08 3.1E-12 103.1 16.4 103 419-523 89-194 (567)
170 1ihg_A Cyclophilin 40; ppiase 98.8 1.2E-08 4E-13 103.5 9.0 87 437-525 223-325 (370)
171 1wao_1 Serine/threonine protei 98.8 1.8E-09 6.2E-14 112.7 3.0 89 436-526 5-93 (477)
172 1dce_A Protein (RAB geranylger 98.8 5.1E-08 1.7E-12 105.0 13.4 105 418-524 44-161 (567)
173 3dra_A Protein farnesyltransfe 98.7 1E-07 3.5E-12 95.9 14.5 103 418-522 84-195 (306)
174 3bee_A Putative YFRE protein; 98.7 4.5E-08 1.5E-12 81.9 9.6 73 433-507 2-77 (93)
175 3n71_A Histone lysine methyltr 98.7 1.4E-08 4.9E-13 108.1 7.1 108 415-524 321-452 (490)
176 1zu2_A Mitochondrial import re 98.7 8.2E-09 2.8E-13 95.9 4.5 70 451-521 15-94 (158)
177 1hz4_A MALT regulatory protein 98.7 3.3E-08 1.1E-12 95.6 8.9 108 416-525 27-153 (373)
178 1hz4_A MALT regulatory protein 98.7 3.2E-08 1.1E-12 95.7 8.8 109 416-526 66-193 (373)
179 3u64_A Protein TP_0956; tetrat 98.7 4.3E-08 1.5E-12 99.7 9.2 90 417-506 177-273 (301)
180 3q15_A PSP28, response regulat 98.7 1.1E-07 3.6E-12 93.4 11.3 123 371-504 159-292 (378)
181 3dra_A Protein farnesyltransfe 98.7 2.2E-07 7.5E-12 93.4 13.8 106 417-524 124-237 (306)
182 4f3v_A ESX-1 secretion system 98.6 2.3E-08 8E-13 100.3 5.3 139 369-514 100-248 (282)
183 1klx_A Cysteine rich protein B 98.6 3.1E-07 1.1E-11 80.0 11.7 81 418-502 40-126 (138)
184 3qww_A SET and MYND domain-con 98.6 1.5E-07 5.3E-12 98.7 11.2 96 414-511 309-425 (433)
185 3q7a_A Farnesyltransferase alp 98.6 2.6E-07 8.8E-12 95.3 12.5 107 417-524 68-176 (349)
186 3ro3_A PINS homolog, G-protein 98.6 1.4E-07 4.8E-12 77.3 8.3 89 415-505 61-161 (164)
187 1klx_A Cysteine rich protein B 98.6 9.3E-07 3.2E-11 76.9 13.2 100 417-525 9-115 (138)
188 3e4b_A ALGK; tetratricopeptide 98.5 3.1E-07 1.1E-11 94.5 11.0 93 417-519 231-330 (452)
189 3dss_A Geranylgeranyl transfer 98.5 1.1E-06 3.8E-11 89.8 14.8 102 419-522 90-194 (331)
190 3e4b_A ALGK; tetratricopeptide 98.5 3.3E-07 1.1E-11 94.2 11.0 97 414-519 262-366 (452)
191 1pc2_A Mitochondria fission pr 98.5 7.6E-07 2.6E-11 82.5 12.1 98 417-516 12-114 (152)
192 2v5f_A Prolyl 4-hydroxylase su 98.5 1.1E-06 3.9E-11 73.1 11.8 80 437-518 5-91 (104)
193 3q7a_A Farnesyltransferase alp 98.5 1.3E-06 4.4E-11 90.1 14.2 103 418-522 104-216 (349)
194 2xm6_A Protein corresponding t 98.5 1.3E-06 4.6E-11 89.0 13.6 103 417-526 310-422 (490)
195 3qwp_A SET and MYND domain-con 98.5 2.6E-07 8.9E-12 96.5 8.3 104 415-520 299-426 (429)
196 3dss_A Geranylgeranyl transfer 98.5 1.6E-06 5.4E-11 88.7 13.8 102 420-523 47-160 (331)
197 2xm6_A Protein corresponding t 98.4 2.3E-06 7.8E-11 87.3 14.7 98 416-519 92-195 (490)
198 3ma5_A Tetratricopeptide repea 98.4 4.7E-07 1.6E-11 73.8 6.7 59 467-526 2-60 (100)
199 3ly7_A Transcriptional activat 98.4 2.5E-06 8.5E-11 89.0 13.1 120 416-537 212-347 (372)
200 4f3v_A ESX-1 secretion system 98.3 2.3E-06 7.9E-11 85.9 10.3 108 416-526 115-227 (282)
201 3u64_A Protein TP_0956; tetrat 98.1 6E-06 2E-10 84.1 9.3 93 432-524 147-257 (301)
202 2v5f_A Prolyl 4-hydroxylase su 98.1 9E-06 3.1E-10 67.7 8.8 65 415-480 17-88 (104)
203 3n71_A Histone lysine methyltr 98.1 3.5E-06 1.2E-10 89.8 7.8 103 396-503 347-465 (490)
204 4b4t_Q 26S proteasome regulato 97.9 1.3E-05 4.3E-10 78.5 6.7 109 416-526 17-154 (434)
205 3bee_A Putative YFRE protein; 97.9 1.2E-05 4.2E-10 67.0 5.5 55 417-472 23-77 (93)
206 3qww_A SET and MYND domain-con 97.8 1.2E-05 4.1E-10 84.4 5.7 78 450-528 310-403 (433)
207 4e6h_A MRNA 3'-END-processing 97.8 6E-05 2E-09 83.5 10.4 104 419-524 325-451 (679)
208 4b4t_Q 26S proteasome regulato 97.8 7.1E-05 2.4E-09 73.2 9.0 111 414-526 106-235 (434)
209 3ly7_A Transcriptional activat 97.7 0.0001 3.6E-09 76.9 9.9 101 426-526 183-296 (372)
210 3mv2_B Coatomer subunit epsilo 97.7 0.00011 3.7E-09 74.8 9.2 107 416-526 113-230 (310)
211 1pc2_A Mitochondria fission pr 97.6 0.00021 7.1E-09 66.2 9.9 101 368-478 9-111 (152)
212 4e6h_A MRNA 3'-END-processing 97.6 0.00011 3.9E-09 81.3 9.4 109 415-524 390-521 (679)
213 3qwp_A SET and MYND domain-con 97.6 7.3E-05 2.5E-09 78.0 7.1 77 450-527 299-391 (429)
214 3mv2_B Coatomer subunit epsilo 97.6 0.00023 8E-09 72.3 9.7 143 372-522 102-270 (310)
215 1nzn_A CGI-135 protein, fissio 97.5 0.00054 1.9E-08 61.7 10.6 92 418-511 16-112 (126)
216 1xi4_A Clathrin heavy chain; a 97.4 0.00042 1.4E-08 83.0 10.4 85 433-525 1101-1185(1630)
217 1xi4_A Clathrin heavy chain; a 97.3 0.0013 4.3E-08 79.0 13.5 95 415-524 1117-1238(1630)
218 2uy1_A Cleavage stimulation fa 97.3 0.0015 5.3E-08 68.8 12.3 107 416-525 226-372 (493)
219 4h7y_A Dual specificity protei 97.2 0.0032 1.1E-07 59.0 11.8 101 420-524 36-144 (161)
220 2uy1_A Cleavage stimulation fa 97.1 0.003 1E-07 66.6 12.0 100 419-522 195-334 (493)
221 4h7y_A Dual specificity protei 97.0 0.0015 5.2E-08 61.2 7.3 92 431-525 7-112 (161)
222 1b89_A Protein (clathrin heavy 96.8 0.0024 8.3E-08 68.1 8.4 94 416-520 161-254 (449)
223 1b89_A Protein (clathrin heavy 96.7 0.00022 7.5E-09 76.1 -0.1 96 416-525 45-140 (449)
224 1zbp_A Hypothetical protein VP 96.2 0.042 1.4E-06 55.4 12.2 63 415-478 9-71 (273)
225 1ya0_A SMG-7 transcript varian 96.0 0.024 8.1E-07 61.0 10.1 64 417-481 166-229 (497)
226 1y8m_A FIS1; mitochondria, unk 95.6 0.045 1.5E-06 50.5 9.0 92 418-511 21-115 (144)
227 3ffl_A Anaphase-promoting comp 95.5 0.035 1.2E-06 52.3 8.1 99 416-517 33-165 (167)
228 1nzn_A CGI-135 protein, fissio 95.5 0.052 1.8E-06 48.8 8.8 65 413-478 48-114 (126)
229 3o48_A Mitochondria fission 1 95.5 0.058 2E-06 49.2 9.0 94 418-513 22-118 (134)
230 4g26_A Pentatricopeptide repea 95.2 0.38 1.3E-05 50.9 15.7 107 416-527 83-195 (501)
231 3ffl_A Anaphase-promoting comp 93.9 0.13 4.3E-06 48.5 7.3 81 444-526 27-141 (167)
232 1ya0_A SMG-7 transcript varian 93.7 0.15 5E-06 54.9 8.5 80 439-520 154-233 (497)
233 4gns_B Protein CSD3, chitin bi 93.7 0.22 7.5E-06 56.3 10.2 105 419-525 265-389 (754)
234 1y8m_A FIS1; mitochondria, unk 93.6 0.19 6.4E-06 46.4 7.8 101 366-477 15-116 (144)
235 3o48_A Mitochondria fission 1 93.6 0.11 3.6E-06 47.5 6.0 102 366-478 16-118 (134)
236 3mkq_A Coatomer beta'-subunit; 93.3 0.77 2.6E-05 48.7 13.1 103 417-525 666-801 (814)
237 2ff4_A Probable regulatory pro 91.4 1.4 4.9E-05 45.0 11.8 61 439-501 173-233 (388)
238 1zbp_A Hypothetical protein VP 91.3 0.77 2.6E-05 46.3 9.5 66 450-516 9-74 (273)
239 4g26_A Pentatricopeptide repea 91.1 3.2 0.00011 43.8 14.5 108 415-526 38-159 (501)
240 4fhn_B Nucleoporin NUP120; pro 86.9 2.8 9.6E-05 48.7 11.3 98 429-528 834-959 (1139)
241 3mkq_B Coatomer subunit alpha; 85.7 7.5 0.00026 36.6 11.5 42 417-464 19-60 (177)
242 4gns_B Protein CSD3, chitin bi 85.6 1.9 6.6E-05 48.7 8.7 55 443-499 343-397 (754)
243 3mkq_A Coatomer beta'-subunit; 82.3 4.7 0.00016 42.7 9.6 69 450-524 664-740 (814)
244 3kae_A CDC27, possible protein 80.1 9.6 0.00033 37.0 9.9 67 443-509 67-150 (242)
245 2ff4_A Probable regulatory pro 75.3 6.1 0.00021 40.3 7.6 50 416-466 184-233 (388)
246 2o8p_A 14-3-3 domain containin 75.1 12 0.00042 36.7 9.3 50 417-466 139-196 (227)
247 2br9_A 14-3-3E, 14-3-3 protein 72.0 8.6 0.0003 37.7 7.4 47 420-466 147-201 (234)
248 2o8p_A 14-3-3 domain containin 70.7 13 0.00045 36.5 8.3 52 451-502 138-197 (227)
249 3iqu_A 14-3-3 protein sigma; s 70.3 9.7 0.00033 37.5 7.3 48 419-466 149-204 (236)
250 2npm_A 14-3-3 domain containin 70.2 9.7 0.00033 38.0 7.4 48 419-466 172-226 (260)
251 1o9d_A 14-3-3-like protein C; 69.1 11 0.00036 37.7 7.4 48 419-466 151-206 (260)
252 3uzd_A 14-3-3 protein gamma; s 68.1 11 0.00038 37.3 7.3 48 419-466 147-202 (248)
253 3mkq_B Coatomer subunit alpha; 68.0 18 0.0006 34.1 8.3 56 435-500 6-61 (177)
254 3ubw_A 14-3-3E, 14-3-3 protein 66.6 12 0.00042 37.4 7.3 47 420-466 173-227 (261)
255 4b4t_R RPN7, 26S proteasome re 65.7 15 0.0005 38.0 8.0 86 416-502 144-237 (429)
256 3spa_A Mtrpol, DNA-directed RN 63.8 1.6E+02 0.0053 35.2 16.6 106 416-525 140-260 (1134)
257 2br9_A 14-3-3E, 14-3-3 protein 63.0 17 0.00057 35.7 7.4 47 455-501 147-201 (234)
258 3txn_A 26S proteasome regulato 62.8 16 0.00053 38.2 7.5 87 415-502 111-210 (394)
259 3efz_A 14-3-3 protein; 14-3-3, 62.0 12 0.0004 37.7 6.1 28 439-466 198-225 (268)
260 3iqu_A 14-3-3 protein sigma; s 61.1 19 0.00064 35.5 7.3 48 454-501 149-204 (236)
261 2npm_A 14-3-3 domain containin 60.8 19 0.00065 35.9 7.4 47 455-501 173-226 (260)
262 3uzd_A 14-3-3 protein gamma; s 59.5 21 0.00071 35.4 7.4 47 455-501 148-202 (248)
263 4b4t_R RPN7, 26S proteasome re 59.3 7 0.00024 40.4 4.2 106 418-525 109-226 (429)
264 1o9d_A 14-3-3-like protein C; 59.2 21 0.00071 35.6 7.4 47 455-501 152-206 (260)
265 4b4t_P 26S proteasome regulato 56.7 89 0.003 32.4 12.0 85 417-502 151-247 (445)
266 3ubw_A 14-3-3E, 14-3-3 protein 55.6 26 0.00089 35.0 7.4 47 455-501 173-227 (261)
267 1wy6_A Hypothetical protein ST 50.0 71 0.0024 30.0 8.7 87 410-502 68-154 (172)
268 3efz_A 14-3-3 protein; 14-3-3, 49.8 23 0.00078 35.6 5.9 49 454-502 168-226 (268)
269 2v6y_A AAA family ATPase, P60 49.7 24 0.00082 29.0 5.1 17 450-466 23-39 (83)
270 2w2u_A Hypothetical P60 katani 49.1 25 0.00084 29.1 5.1 17 450-466 31-47 (83)
271 3esl_A Checkpoint serine/threo 49.0 71 0.0024 30.7 9.0 84 433-519 76-162 (202)
272 4gq2_M Nucleoporin NUP120; bet 45.0 1.4E+02 0.0048 34.2 12.1 81 427-508 830-933 (950)
273 1qsa_A Protein (soluble lytic 41.7 1E+02 0.0036 33.8 10.1 80 419-501 268-347 (618)
274 3txn_A 26S proteasome regulato 41.5 67 0.0023 33.5 8.1 108 417-526 73-200 (394)
275 4a5x_A MITD1, MIT domain-conta 38.5 39 0.0013 28.0 4.8 18 450-467 28-45 (86)
276 2ijq_A Hypothetical protein; s 37.7 1.3E+02 0.0044 27.9 8.6 58 443-501 38-103 (161)
277 1wfd_A Hypothetical protein 15 37.1 47 0.0016 27.7 5.1 18 450-467 27-44 (93)
278 2cpt_A SKD1 protein, vacuolar 35.8 49 0.0017 28.9 5.2 18 450-467 30-47 (117)
279 2v6y_A AAA family ATPase, P60 34.5 52 0.0018 26.9 4.8 15 456-470 36-50 (83)
280 2w2u_A Hypothetical P60 katani 33.7 54 0.0019 27.0 4.8 16 456-471 44-59 (83)
281 2v6x_A Vacuolar protein sortin 33.6 67 0.0023 26.0 5.4 18 450-467 25-42 (85)
282 4b4t_S RPN3, 26S proteasome re 32.9 48 0.0016 36.1 5.6 56 450-506 243-303 (523)
283 1wy6_A Hypothetical protein ST 32.4 93 0.0032 29.2 6.6 57 417-476 105-161 (172)
284 4b4t_P 26S proteasome regulato 29.6 2.8E+02 0.0095 28.7 10.5 84 440-525 140-236 (445)
285 3re2_A Predicted protein; meni 28.1 1.3E+02 0.0044 32.1 7.5 14 486-499 309-322 (472)
286 4a5x_A MITD1, MIT domain-conta 26.4 75 0.0026 26.2 4.5 16 456-471 41-56 (86)
287 4b4t_S RPN3, 26S proteasome re 26.2 1E+02 0.0035 33.6 6.7 54 416-472 244-304 (523)
288 2wvi_A Mitotic checkpoint seri 25.0 3.4E+02 0.012 25.0 9.2 89 423-519 43-142 (164)
289 3spa_A Mtrpol, DNA-directed RN 24.7 4.9E+02 0.017 31.1 12.2 81 439-523 129-216 (1134)
290 3ax2_A Mitochondrial import re 24.5 2.5E+02 0.0085 22.8 7.2 32 478-510 23-54 (73)
291 1wfd_A Hypothetical protein 15 24.2 90 0.0031 26.0 4.6 48 416-472 9-56 (93)
292 2cwy_A Hypothetical protein TT 23.8 1.7E+02 0.0058 24.5 6.3 56 443-501 7-67 (94)
293 4gq4_A Menin; tumor suppressor 23.6 1.7E+02 0.0058 31.6 7.5 43 457-500 283-330 (489)
294 3r84_A Mediator of RNA polymer 23.2 1.1E+02 0.0038 25.8 4.9 48 187-236 13-68 (86)
295 2cpt_A SKD1 protein, vacuolar 22.8 3.1E+02 0.011 23.7 8.0 48 419-475 15-62 (117)
296 2cfu_A SDSA1; SDS-hydrolase, l 22.8 94 0.0032 34.2 5.7 37 444-481 456-492 (658)
297 2dl1_A Spartin; SPG20, MIT, st 22.6 52 0.0018 29.3 2.9 32 454-501 19-50 (116)
298 1m3w_A H10H24; four-helix bund 21.8 43 0.0015 23.1 1.7 13 76-88 10-22 (32)
299 3kae_A CDC27, possible protein 21.7 2.6E+02 0.009 27.1 7.7 58 417-475 76-151 (242)
300 3esl_A Checkpoint serine/threo 21.1 2.3E+02 0.008 27.1 7.4 69 396-469 76-146 (202)
301 3u84_A Menin; MLL, JUND, ledgf 20.6 2.1E+02 0.0071 31.1 7.4 66 434-501 274-346 (550)
302 4aez_C MAD3, mitotic spindle c 20.4 1.3E+02 0.0045 29.3 5.5 75 423-503 97-180 (223)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.74 E-value=3e-17 Score=140.92 Aligned_cols=120 Identities=19% Similarity=0.207 Sum_probs=109.8
Q ss_pred ccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH
Q 009204 393 RILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA 472 (540)
Q Consensus 393 eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA 472 (540)
..+||+....+...+.... ..|+|++|+.+|++||+++|+++.++.++|.++. ..|++++|+..|++||+++|+++
T Consensus 6 a~inP~~a~~~~~~G~~~~---~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 6 AYINPELAQEEKNKGNEYF---KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLT-KLMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp -CCCHHHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHCHHHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHH-hhccHHHHHHHHHHHHHhhhhhh
Confidence 4789999998887766643 4599999999999999999999999999999988 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 009204 473 EALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFL 517 (540)
Q Consensus 473 eAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L 517 (540)
.+|.++|.++.. .|++++|+++|++|++++|++++++.+++.++
T Consensus 82 ~a~~~lg~~~~~-~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 82 KGYIRKAACLVA-MREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999998764 79999999999999999999999999998875
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.65 E-value=2.4e-16 Score=138.17 Aligned_cols=123 Identities=12% Similarity=0.110 Sum_probs=86.2
Q ss_pred CCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHH
Q 009204 395 LDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEA 474 (540)
Q Consensus 395 LD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeA 474 (540)
.+|+....+...+... ...|++++|+.+|+++|+++|+++.+|.++|.++. ..|++++|+.+|++|++++|+++++
T Consensus 26 ~~p~~~~~~~~la~~y---~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~ 101 (150)
T 4ga2_A 26 SPRQKSIKGFYFAKLY---YEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVECYRRSVELNPTQKDL 101 (150)
T ss_dssp SHHHHHTTHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cCcccHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHHHHHHHHHhCCCCHHH
Confidence 3455444443333332 23477888888888888888888888888887777 4888888888888888888888888
Q ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 475 LSQYADFLWLVRKDLWAAEE-TYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 475 l~NLA~~L~~~rGD~EEAee-~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
+.++|.++.. .|++++|.+ ++++|++++|+++.++..++.++...|+
T Consensus 102 ~~~la~~~~~-~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 102 VLKIAELLCK-NDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHH-HCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHH-cCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 8888876654 466655544 4577888888888887777777777665
No 3
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.62 E-value=2.6e-15 Score=138.20 Aligned_cols=143 Identities=14% Similarity=-0.035 Sum_probs=115.1
Q ss_pred HHHHHHhhchhhhhh----ccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc--
Q 009204 378 SVLDEALRIQEESEY----RILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVT-- 451 (540)
Q Consensus 378 ~~L~eap~~q~~~~~----eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~-- 451 (540)
.++.+..+..++... ..++|+....+...+.+. ...|++++|+.+|+++++++|+++.++.++|.++.. .
T Consensus 13 ~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~---~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~-~~~ 88 (217)
T 2pl2_A 13 VQLYALGRYDAALTLFERALKENPQDPEALYWLARTQ---LKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVA-LYR 88 (217)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hhh
Confidence 344444445544333 245666666665554443 245899999999999999999999999999998884 8
Q ss_pred ---------CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 452 ---------KDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 452 ---------GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
|++++|+.+|++|++++|+++.++.++|.++. ..|++++|+++|++|++++ +++.++.++|.++..+|+
T Consensus 89 ~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~ 166 (217)
T 2pl2_A 89 QAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYA-LLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGR 166 (217)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTC
T ss_pred hhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999998775 4789999999999999999 999999999999999999
Q ss_pred Cccc
Q 009204 523 EETC 526 (540)
Q Consensus 523 ~Et~ 526 (540)
+++|
T Consensus 167 ~~~A 170 (217)
T 2pl2_A 167 LDEA 170 (217)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 4
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.62 E-value=3e-15 Score=165.83 Aligned_cols=144 Identities=19% Similarity=0.150 Sum_probs=119.7
Q ss_pred HHHHHHHhhchhhhhh--c--cCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC
Q 009204 377 NSVLDEALRIQEESEY--R--ILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK 452 (540)
Q Consensus 377 ~~~L~eap~~q~~~~~--e--aLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G 452 (540)
..++.+..+..++..+ . .++|+....+.+.+.+. ...|++++|+.+|++||+++|+++.+|+++|.++.. +|
T Consensus 16 G~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l---~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~-~g 91 (723)
T 4gyw_A 16 ANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVL---QQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKE-MQ 91 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cC
Confidence 3444444444444333 1 33555555555554443 245999999999999999999999999999999984 99
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 453 DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 453 D~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++++|+++|++||+++|++++++.++|.++. ..|++++|+++|++|++++|+++.++.++|.+|..+|++++
T Consensus 92 ~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~-~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 92 DVQGALQCYTRAIQINPAFADAHSNLASIHK-DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTT
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHH
Confidence 9999999999999999999999999999876 47999999999999999999999999999999999999875
No 5
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.62 E-value=6.5e-15 Score=129.05 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=103.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|+..|++++..+|+++..++++|.+++. .|++++|+++|++||+++|+++.+|.++|.++. ..|++++|+.
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~-~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~~~~~~A~~ 86 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYE-AKEYDLAKKYICTYINVQERDPKAHRFLGLLYE-LEENTDKAVE 86 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCchHHHHH
Confidence 34889999999999999999999999999999994 999999999999999999999999999999876 5799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|++|++++|+++.++.++|.++..+|++++
T Consensus 87 ~~~~al~~~p~~~~~~~~la~~~~~~~~~~~ 117 (150)
T 4ga2_A 87 CYRRSVELNPTQKDLVLKIAELLCKNDVTDG 117 (150)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHCSSSS
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCChHH
Confidence 9999999999999999999999999999864
No 6
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.61 E-value=2.2e-15 Score=166.87 Aligned_cols=123 Identities=20% Similarity=0.193 Sum_probs=110.2
Q ss_pred HHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 009204 398 ETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQ 477 (540)
Q Consensus 398 e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~N 477 (540)
+-...+.+.+.+. .+.|++++|+.+|++||+++|+++.+++|+|.+|. .+|++++|+++|++||+++|+++++|.+
T Consensus 7 ~~a~al~nLG~~~---~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~-~~g~~~eA~~~~~~Al~l~P~~~~a~~n 82 (723)
T 4gyw_A 7 THADSLNNLANIK---REQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQ-QQGKLQEALMHYKEAIRISPTFADAYSN 82 (723)
T ss_dssp HHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3344444444443 24599999999999999999999999999999999 4999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 478 YADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 478 LA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|.++. ..|++++|+++|++|++++|+++.++.++|.+|..+|++++
T Consensus 83 Lg~~l~-~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~e 129 (723)
T 4gyw_A 83 MGNTLK-EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPE 129 (723)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 999876 47999999999999999999999999999999999999875
No 7
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.60 E-value=7.7e-15 Score=135.05 Aligned_cols=109 Identities=20% Similarity=0.179 Sum_probs=96.2
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETY 496 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~f 496 (540)
|++++|+..|+++++++|+++.++.++|.++. ..|++++|+.+|++|++++ +++.++.++|.++.. .|++++|+.+|
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~-~g~~~~A~~~~ 174 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYA-LLGERDKAEASLKQALALE-DTPEIRSALAELYLS-MGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HTCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHH-cCCHHHHHHHH
Confidence 89999999999999999999999999999988 4999999999999999999 999999999998764 79999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccccc
Q 009204 497 QQAMAAEPNSSSYASKYASFLWNTGGEETCFP 528 (540)
Q Consensus 497 eKALeLDPdnpeal~NLA~~L~~~GR~Et~~p 528 (540)
+++++++|+++.++.++|.++..+|+++++..
T Consensus 175 ~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~ 206 (217)
T 2pl2_A 175 AKALEQAPKDLDLRVRYASALLLKGKAEEAAR 206 (217)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHTC---------
T ss_pred HHHHHhCCCChHHHHHHHHHHHHccCHHHHHH
Confidence 99999999999999999999999999987643
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.59 E-value=1.3e-15 Score=137.04 Aligned_cols=110 Identities=8% Similarity=0.097 Sum_probs=98.8
Q ss_pred ccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH
Q 009204 393 RILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA 472 (540)
Q Consensus 393 eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA 472 (540)
..++|+....+...+.+. ...|++++|+.+|+++++++|+++.+|.++|.++. ..|++++|+++|++|++++|+++
T Consensus 29 l~l~p~~~~~~~~lg~~~---~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 29 NAIPDDMMDDIYSYAYDF---YNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp CCSCHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSSSCC
T ss_pred hCCCHHHHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCCCCc
Confidence 467999888887765553 35699999999999999999999999999999988 49999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 009204 473 EALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS 507 (540)
Q Consensus 473 eAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnp 507 (540)
.++.++|.++. ..|++++|+.+|++|++++|+.+
T Consensus 105 ~~~~~lg~~~~-~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 105 TPVFHTGQCQL-RLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999876 47999999999999999999876
No 9
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.59 E-value=4.8e-14 Score=113.11 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=101.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.+++++|..+|++++..+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+.+
T Consensus 25 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~ 102 (131)
T 2vyi_A 25 VENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALS-SLNKHVEAVAY 102 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHH-HhCCHHHHHHH
Confidence 489999999999999999999999999999988 4999999999999999999999999999999876 47999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
|+++++++|+++.++..++.++..+|+++
T Consensus 103 ~~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 103 YKKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999874
No 10
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.59 E-value=7.7e-15 Score=134.21 Aligned_cols=106 Identities=14% Similarity=0.167 Sum_probs=99.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHH----------------HHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLN----------------YAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYA 479 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allN----------------LA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA 479 (540)
.|++++|+.+|+++++.+|+++.+++. +|.++. ..|++++|+.+|++||+++|+++.++.++|
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 95 (208)
T 3urz_A 17 AGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYK-KNRNYDKAYLFYKELLQKAPNNVDCLEACA 95 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 489999999999999999999999999 999988 599999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009204 480 DFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGE 523 (540)
Q Consensus 480 ~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~ 523 (540)
.++.. .|++++|+++|+++++++|+++.++.++|.+++..|+.
T Consensus 96 ~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 96 EMQVC-RGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 98765 79999999999999999999999999999999877653
No 11
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.57 E-value=5.3e-14 Score=116.79 Aligned_cols=103 Identities=18% Similarity=0.101 Sum_probs=96.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~A~~ 93 (126)
T 3upv_A 16 TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIA-VKEYASALE 93 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-HhCHHHHHH
Confidence 3489999999999999999999999999999988 59999999999999999999999999999998764 799999999
Q ss_pred HHHHHHHhC------CCCHHHHHHHHHHHHH
Q 009204 495 TYQQAMAAE------PNSSSYASKYASFLWN 519 (540)
Q Consensus 495 ~feKALeLD------Pdnpeal~NLA~~L~~ 519 (540)
+|+++++++ |+++.++..++.+...
T Consensus 94 ~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 94 TLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 999999999 9999999998887654
No 12
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.56 E-value=4.1e-14 Score=127.15 Aligned_cols=104 Identities=13% Similarity=0.007 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 009204 420 FRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQA 499 (540)
Q Consensus 420 eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKA 499 (540)
..+...|+++++++|+++.+++++|..++. .|++++|+.+|++|++++|+++.+|.++|.++. ..|++++|+++|++|
T Consensus 19 ~~~~~~l~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~-~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 19 INSGATLKDINAIPDDMMDDIYSYAYDFYN-KGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQ-IKEQFQQAADLYAVA 96 (151)
T ss_dssp HHTSCCTGGGCCSCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHH
T ss_pred HHCCCCHHHHhCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HHccHHHHHHHHHHH
Confidence 334457889999999999999999999994 999999999999999999999999999999876 479999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 500 MAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 500 LeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++++|+++.+++++|.+|..+|++++
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~~~e 122 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKAPLK 122 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTCHHH
T ss_pred HhhCCCCcHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999875
No 13
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.56 E-value=3.9e-14 Score=115.08 Aligned_cols=105 Identities=20% Similarity=0.205 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.+++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+++
T Consensus 29 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~ 106 (133)
T 2lni_A 29 KGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTRKAAALE-AMKDYTKAMDV 106 (133)
T ss_dssp TTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHH-HHhhHHHHHHH
Confidence 388999999999999999999999999999888 5999999999999999999999999999999876 47999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
|+++++++|++..++..++.++..+|+
T Consensus 107 ~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 107 YQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999988774
No 14
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.56 E-value=5.2e-15 Score=130.00 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=97.7
Q ss_pred cCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH
Q 009204 394 ILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE 473 (540)
Q Consensus 394 aLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAe 473 (540)
.++|+....+...+... ...|++++|+.+|+++++.+|+++.+|.++|.++. ..|++++|+.+|++|++++|+++.
T Consensus 15 ~~~p~~~~~~~~~g~~~---~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~ 90 (148)
T 2vgx_A 15 EISSDTLEQLYSLAFNQ---YQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAVMDIXEPR 90 (148)
T ss_dssp TCCHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTH
T ss_pred cCCHhhHHHHHHHHHHH---HHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCch
Confidence 56787777776654443 24599999999999999999999999999999888 499999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 009204 474 ALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYAS 511 (540)
Q Consensus 474 Al~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~ 511 (540)
++.++|.++. ..|++++|+++|++|++++|+++....
T Consensus 91 ~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~ 127 (148)
T 2vgx_A 91 FPFHAAECLL-QXGELAEAESGLFLAQELIANXPEFXE 127 (148)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTCGGGHH
T ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCCCcchH
Confidence 9999998876 479999999999999999998876543
No 15
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.55 E-value=5.1e-14 Score=122.63 Aligned_cols=101 Identities=26% Similarity=0.233 Sum_probs=93.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+++
T Consensus 24 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~ 101 (164)
T 3sz7_A 24 RKEYSKAIDLYTQALSIAPANPIYLSNRAAAYS-ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFD-MADYKGAKEA 101 (164)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-ccCHHHHHHH
Confidence 489999999999999999999999999999988 49999999999999999999999999999998764 7999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHH
Q 009204 496 YQQAMAAEPNSSSYASKYASFLW 518 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~ 518 (540)
|+++++++|+++.++.+.+....
T Consensus 102 ~~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 102 YEKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999987666665543
No 16
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.54 E-value=2e-13 Score=119.31 Aligned_cols=109 Identities=12% Similarity=-0.025 Sum_probs=101.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|...+++++..+|+++.++.++|.++. ..+++++|.+++++|++++|++..++..+|.++. ..|++++|++
T Consensus 51 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~ 128 (184)
T 3vtx_A 51 DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF-MIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD-SMGEHDKAIE 128 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HhCCchhHHH
Confidence 3489999999999999999999999999999888 4999999999999999999999999999999876 4799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|+++++++|+++.++.++|.++..+|++++
T Consensus 129 ~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~ 159 (184)
T 3vtx_A 129 AYEKTISIKPGFIRAYQSIGLAYEGKGLRDE 159 (184)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhcchhhhHHHHHHHHHHHCCCHHH
Confidence 9999999999999999999999999999874
No 17
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.54 E-value=2.9e-14 Score=145.99 Aligned_cols=154 Identities=12% Similarity=0.045 Sum_probs=117.9
Q ss_pred CChHHHHHHH---HHHHHHhhchhhhhh----ccCCHHHHHhcccccccccCCCCCCC-HHHHHHHHHHHHHcCCCCHHH
Q 009204 368 MNKEELDLWN---SVLDEALRIQEESEY----RILDHETMQHFVTPVTVKLEPDDYMD-YFRTDLLYQMGVAEEPNNPLL 439 (540)
Q Consensus 368 ~~~ee~~LW~---~~L~eap~~q~~~~~----eaLD~e~~~~lvapv~a~Le~d~~Gd-~eeAe~lYqkALalDP~Np~a 439 (540)
.+.+-..+|. .++....+..++... ..++|+....+...+.+.. ..|+ +++|+.+|++||+++|+++.+
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~---~~g~d~~eAl~~~~~al~l~P~~~~a 168 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLK---SLQKDLHEEMNYITAIIEEQPKNYQV 168 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH---HTTCCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHH---HcccCHHHHHHHHHHHHHHCCCCHHH
Confidence 3444444444 333333334444433 1446666666655544432 3475 999999999999999999999
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009204 440 LLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWN 519 (540)
Q Consensus 440 llNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~ 519 (540)
|+++|.++. ..|++++|+.+|++||+++|+++.+|.++|.++.. .|++++|+.+|++|++++|+++.+|.++|.+|..
T Consensus 169 ~~~~g~~~~-~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~-~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 169 WHHRRVLVE-WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQE-FKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHH-cCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999888 49999999999999999999999999999987764 6889999999999999999999999999999999
Q ss_pred -cCCCccc
Q 009204 520 -TGGEETC 526 (540)
Q Consensus 520 -~GR~Et~ 526 (540)
.|+.+++
T Consensus 247 l~~~~~eA 254 (382)
T 2h6f_A 247 TTGYNDRA 254 (382)
T ss_dssp TTCSCSHH
T ss_pred hcCcchHH
Confidence 4443554
No 18
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.53 E-value=2.9e-14 Score=122.32 Aligned_cols=96 Identities=16% Similarity=0.042 Sum_probs=88.4
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 009204 428 MGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS 507 (540)
Q Consensus 428 kALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnp 507 (540)
++..+||+.+.++.+.|..++ ..|++++|+++|++||+++|+++.++.++|.++.. .|++++|+..|++|++++|+++
T Consensus 4 r~a~inP~~a~~~~~~G~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYF-KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTK-LMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHCHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHh-hccHHHHHHHHHHHHHhhhhhh
Confidence 345589999999999999999 49999999999999999999999999999998764 7999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcc
Q 009204 508 SYASKYASFLWNTGGEET 525 (540)
Q Consensus 508 eal~NLA~~L~~~GR~Et 525 (540)
.++.++|.++..+|++++
T Consensus 82 ~a~~~lg~~~~~~~~~~~ 99 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSK 99 (126)
T ss_dssp HHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHCCCHHH
Confidence 999999999999999874
No 19
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.52 E-value=1.9e-13 Score=119.44 Aligned_cols=108 Identities=19% Similarity=0.115 Sum_probs=103.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|+.+|++||+++|+++.++.++|.++. ..|++++|+..+++++..+|+++.++..+|..+. ..+++++|.+.
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~ 95 (184)
T 3vtx_A 18 KGDFDGAIRAYKKVLKADPNNVETLLKLGKTYM-DIGLPNDAIESLKKFVVLDTTSAEAYYILGSANF-MIDEKQAAIDA 95 (184)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHH-HcCCHHHHHHH
Confidence 499999999999999999999999999999988 4999999999999999999999999999998765 47899999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+++++.++|+++.++..+|.++..+|++++
T Consensus 96 ~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~ 125 (184)
T 3vtx_A 96 LQRAIALNTVYADAYYKLGLVYDSMGEHDK 125 (184)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhCccchHHHHHHHHHHHHhCCchh
Confidence 999999999999999999999999999875
No 20
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.52 E-value=4.5e-13 Score=106.61 Aligned_cols=104 Identities=27% Similarity=0.347 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+
T Consensus 22 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~ 99 (125)
T 1na0_A 22 QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEY 99 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHH
Confidence 489999999999999999999999999999988 49999999999999999999999999999998764 7899999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTG 521 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~G 521 (540)
|+++++.+|+++.++.+++.++..+|
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 100 YQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 99999999999999999999988765
No 21
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.52 E-value=3.6e-14 Score=124.06 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=97.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCH--HHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDL--WAA 492 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~--EEA 492 (540)
..|++++|...|+++++.+|+++.++..+|.++. ..|++++|+.+|+++++++|+++.++.++|.+++...|++ ++|
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A 100 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQNSEQWALLGEYYL-WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQT 100 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHH
T ss_pred hccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHH
Confidence 4588999999999999999999999999999988 4999999999999999999999999999998844457888 999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 493 EETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+.+|+++++++|+++.++.++|.++...|++++
T Consensus 101 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~ 133 (177)
T 2e2e_A 101 RAMIDKALALDSNEITALMLLASDAFMQANYAQ 133 (177)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHH
Confidence 999999999999999999999999999999764
No 22
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.52 E-value=9.1e-14 Score=122.03 Aligned_cols=102 Identities=13% Similarity=0.001 Sum_probs=95.8
Q ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 422 TDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 422 Ae~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
+...|+++++++|++..+++++|..++. .|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+++|++|++
T Consensus 6 ~~~~~~~al~~~p~~~~~~~~~g~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSDTLEQLYSLAFNQYQ-SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQ-AMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHhhHHHHHHHHHHHHH-cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh
Confidence 3457999999999999999999999994 999999999999999999999999999999876 57999999999999999
Q ss_pred hCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 502 AEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 502 LDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++|+++.+++++|.++..+|++++
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~ 107 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAE 107 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHH
Confidence 999999999999999999999874
No 23
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.52 E-value=1.6e-13 Score=124.21 Aligned_cols=109 Identities=17% Similarity=0.101 Sum_probs=102.0
Q ss_pred CCCCHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEP-NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP-~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAe 493 (540)
..|++++|..+|+++++.+| .+..+++++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+
T Consensus 19 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~ 96 (228)
T 4i17_A 19 NAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCAD-NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRD-MKNNQEYI 96 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH-HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHH-cccHHHHH
Confidence 34899999999999999999 99999999999988 59999999999999999999999999999998764 79999999
Q ss_pred HHHHHHHHhCCCCH-------HHHHHHHHHHHHcCCCcc
Q 009204 494 ETYQQAMAAEPNSS-------SYASKYASFLWNTGGEET 525 (540)
Q Consensus 494 e~feKALeLDPdnp-------eal~NLA~~L~~~GR~Et 525 (540)
.+|+++++++|+++ .++.++|.++..+|++++
T Consensus 97 ~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 135 (228)
T 4i17_A 97 ATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEK 135 (228)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHH
Confidence 99999999999999 669999999999999874
No 24
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.51 E-value=3.6e-14 Score=117.95 Aligned_cols=108 Identities=13% Similarity=0.112 Sum_probs=94.6
Q ss_pred CCCHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHH
Q 009204 416 YMDYFRTDLLYQMGVAE---EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALal---DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEA 492 (540)
.|++++|+.+|++|++. +|+++.++.++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFR-TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYN-LGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH-cCCHHHH
Confidence 47899999999999999 6999999999999998 49999999999999999999999999999998765 7999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 493 EETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+++|+++++.+|+++.+......+....+..++
T Consensus 81 ~~~~~~al~~~p~~~~~~~~~~ai~~~~~~l~~ 113 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQSYKQAILFYADKLDE 113 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHHTHHHHHHHTTCTTC
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987766666666666654
No 25
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.51 E-value=8.9e-14 Score=119.28 Aligned_cols=118 Identities=13% Similarity=0.040 Sum_probs=98.1
Q ss_pred cCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH
Q 009204 394 ILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE 473 (540)
Q Consensus 394 aLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAe 473 (540)
.++|+....+...+... ...|++++|+.+|++++..+|+++.+|.++|.++. ..|++++|+.+|++|++++|+++.
T Consensus 12 ~~~p~~~~~~~~~a~~~---~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 12 GLSEDTLEQLYALGFNQ---YQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp TCCHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred cCCHHHHHHHHHHHHHH---HHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCcH
Confidence 34555555544433222 24589999999999999999999999999999988 499999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 009204 474 ALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASF 516 (540)
Q Consensus 474 Al~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~ 516 (540)
++.++|.++. ..|++++|+++|+++++++|+++........+
T Consensus 88 ~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 129 (142)
T 2xcb_A 88 FPFHAAECHL-QLGDLDGAESGFYSARALAAAQPAHEALAARA 129 (142)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHH
T ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCcchHHHHHHH
Confidence 9999999876 47999999999999999999888765544443
No 26
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.51 E-value=2.4e-14 Score=122.81 Aligned_cols=100 Identities=13% Similarity=-0.009 Sum_probs=91.6
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 009204 424 LLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAE 503 (540)
Q Consensus 424 ~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLD 503 (540)
..|+++++.+|++...++++|..++. .|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|++|++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQ-AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQ-SLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHH-HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcC
Confidence 57889999999999999999999984 999999999999999999999999999999876 5799999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCcc
Q 009204 504 PNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 504 Pdnpeal~NLA~~L~~~GR~Et 525 (540)
|+++.+++++|.++..+|++++
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~ 104 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDG 104 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHH
Confidence 9999999999999999999874
No 27
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.51 E-value=2e-13 Score=115.29 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+++
T Consensus 26 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~ 103 (166)
T 1a17_A 26 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNM-ALGKFRAALRD 103 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HhccHHHHHHH
Confidence 489999999999999999999999999999988 4999999999999999999999999999999776 47999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHH--HHHcCCCcc
Q 009204 496 YQQAMAAEPNSSSYASKYASF--LWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~--L~~~GR~Et 525 (540)
|+++++++|+++.++..++.+ +...|++++
T Consensus 104 ~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 135 (166)
T 1a17_A 104 YETVVKVKPHDKDAKMKYQECNKIVKQKAFER 135 (166)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988555555 777777664
No 28
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.51 E-value=5e-13 Score=105.65 Aligned_cols=100 Identities=18% Similarity=0.166 Sum_probs=94.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|++++..+|+++.++.++|.++. ..|++++|..+|+++++++|+++.++.++|.++. ..|++++|+++
T Consensus 17 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~ 94 (118)
T 1elw_A 17 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYA-KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE-FLNRFEEAKRT 94 (118)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH-HHhhHHHHHHH
Confidence 489999999999999999999999999999988 4999999999999999999999999999999876 47999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHH
Q 009204 496 YQQAMAAEPNSSSYASKYASFL 517 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L 517 (540)
|+++++++|+++.++..++.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 95 YEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999988765
No 29
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.50 E-value=4.9e-13 Score=106.75 Aligned_cols=109 Identities=24% Similarity=0.312 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++.. .|++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+
T Consensus 14 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~ 91 (136)
T 2fo7_A 14 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEY 91 (136)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHH-hcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHH
Confidence 3889999999999999999999999999998884 999999999999999999999999999998765 57999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+++++..+|+++.++..+|.++...|+++++
T Consensus 92 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 92 YQKALELDPRSAEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHccHHHH
Confidence 9999999999999999999999999998754
No 30
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.49 E-value=1.5e-13 Score=140.82 Aligned_cols=104 Identities=11% Similarity=-0.025 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHH----
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAA---- 492 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEA---- 492 (540)
|++++|+.+|++||+++|+|..+|+++|.++. ..|++++|+.+|++||+++|+++.+|+++|.++....|.+++|
T Consensus 180 g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~-~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~~~ 258 (382)
T 2h6f_A 180 RDPSQELEFIADILNQDAKNYHAWQHRQWVIQ-EFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLER 258 (382)
T ss_dssp TCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCccCHHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHHHH
Confidence 56666666666666666666666666666666 3666666666666666666666666666666554434443555
Q ss_pred -HHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009204 493 -EETYQQAMAAEPNSSSYASKYASFLWNTG 521 (540)
Q Consensus 493 -ee~feKALeLDPdnpeal~NLA~~L~~~G 521 (540)
+++|++|++++|+++.+|.+++.+|...|
T Consensus 259 el~~~~~Al~l~P~~~~a~~~l~~ll~~~g 288 (382)
T 2h6f_A 259 EVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 (382)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHccC
Confidence 46666666666666666666666665544
No 31
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.48 E-value=8.1e-13 Score=111.74 Aligned_cols=110 Identities=15% Similarity=0.098 Sum_probs=103.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++..+|.++. ..|++++|++
T Consensus 54 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~ 131 (186)
T 3as5_A 54 KTGAVDRGTELLERSLADAPDNVKVATVLGLTYV-QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALD-NLGRFDEAID 131 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHH-HcCcHHHHHH
Confidence 3589999999999999999999999999999988 4999999999999999999999999999999876 4799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++.+|+++.++..+|.++...|++++|
T Consensus 132 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 163 (186)
T 3as5_A 132 SFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA 163 (186)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999998753
No 32
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.48 E-value=1.6e-13 Score=116.69 Aligned_cols=91 Identities=13% Similarity=0.053 Sum_probs=80.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|...|+++++.+|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+
T Consensus 30 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~-~g~~~~A~~~ 107 (121)
T 1hxi_A 30 LANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN-EHNANAALAS 107 (121)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHHHH
Confidence 489999999999999999999999999999988 49999999999999999999999999999998764 7899999999
Q ss_pred HHHHHHhCCCCHH
Q 009204 496 YQQAMAAEPNSSS 508 (540)
Q Consensus 496 feKALeLDPdnpe 508 (540)
|+++++++|+++.
T Consensus 108 ~~~al~~~P~~~~ 120 (121)
T 1hxi_A 108 LRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHC-------
T ss_pred HHHHHHhCcCCCC
Confidence 9999999998764
No 33
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.48 E-value=1.8e-13 Score=118.86 Aligned_cols=106 Identities=19% Similarity=0.139 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHc------------------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAE------------------EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQ 477 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALal------------------DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~N 477 (540)
.|+|++|..+|++||.. +|.+..++.|+|.++. ..|++++|+.++++||+++|+++.++.+
T Consensus 24 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~~~~~~A~~~~~~al~~~p~~~~a~~~ 102 (162)
T 3rkv_A 24 QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL-NIGDLHEAEETSSEVLKREETNEKALFR 102 (162)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHhcCCcchHHHHH
Confidence 48999999999999999 7788899999999988 5999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCC
Q 009204 478 YADFLWLVRKDLWAAEETYQQAMAAEPNSS-SYASKYASFLWNTGGE 523 (540)
Q Consensus 478 LA~~L~~~rGD~EEAee~feKALeLDPdnp-eal~NLA~~L~~~GR~ 523 (540)
+|.++.. .|++++|+.+|++|++++|+++ .+...++.+....++.
T Consensus 103 ~g~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 103 RAKARIA-AWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9998764 7999999999999999999999 6677777776655443
No 34
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=7.7e-13 Score=109.65 Aligned_cols=102 Identities=23% Similarity=0.185 Sum_probs=94.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNN---PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~N---p~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEA 492 (540)
.|++++|..+|+++++.+|++ ..++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|
T Consensus 41 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A 118 (148)
T 2dba_A 41 CGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEK-LGRLDQA 118 (148)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH-HTCHHHH
T ss_pred hCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHH-cCCHHHH
Confidence 489999999999999999998 899999999988 49999999999999999999999999999998765 7899999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009204 493 EETYQQAMAAEPNSSSYASKYASFLWN 519 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~~L~~ 519 (540)
+.+|+++++++|+++.++..++.+...
T Consensus 119 ~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 119 VLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 999999999999999999988887543
No 35
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.47 E-value=2.9e-13 Score=134.13 Aligned_cols=108 Identities=18% Similarity=0.125 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNN---------------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYAD 480 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~N---------------p~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~ 480 (540)
.|++++|..+|++|++++|++ ..++.++|.++. ..|++++|+.+|++||+++|+++.++.++|.
T Consensus 160 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 238 (336)
T 1p5q_A 160 EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHL-KLQAFSAAIESCNKALELDSNNEKGLSRRGE 238 (336)
T ss_dssp HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 489999999999999999999 699999999988 5999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 481 FLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 481 ~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++.. .|++++|+.+|++|++++|+++.++.+++.++..+|++++
T Consensus 239 ~~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~ 282 (336)
T 1p5q_A 239 AHLA-VNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLA 282 (336)
T ss_dssp HHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 8764 7999999999999999999999999999999999998764
No 36
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.47 E-value=4.6e-13 Score=119.96 Aligned_cols=108 Identities=17% Similarity=0.103 Sum_probs=101.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH----------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP----------------LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYA 479 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np----------------~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA 479 (540)
.|++++|..+|++++++.|+++ .++.++|.++. ..|++++|+.+|++|++++|+++.++.++|
T Consensus 51 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 129 (198)
T 2fbn_A 51 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYN-KNKDYPKAIDHASKVLKIDKNNVKALYKLG 129 (198)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 4899999999999999999998 89999999988 599999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 480 DFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 480 ~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
.++.. .|++++|+++|++|++++|+++.++..++.++..+++.++
T Consensus 130 ~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 174 (198)
T 2fbn_A 130 VANMY-FGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARK 174 (198)
T ss_dssp HHHHH-HTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHH
Confidence 98764 7899999999999999999999999999999998887653
No 37
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.46 E-value=5.2e-13 Score=128.18 Aligned_cols=109 Identities=18% Similarity=0.209 Sum_probs=103.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~--Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEA 492 (540)
..|++++|..+|+++++.+|+ ++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++.. .|++++|
T Consensus 189 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A 266 (365)
T 4eqf_A 189 DSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFH-LSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLAN-GDRSEEA 266 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred hhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHH
Confidence 458999999999999999999 9999999999988 49999999999999999999999999999998764 7999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 493 EETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+++|+++++++|+++.++.++|.++..+|++++
T Consensus 267 ~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 299 (365)
T 4eqf_A 267 VEAYTRALEIQPGFIRSRYNLGISCINLGAYRE 299 (365)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHH
Confidence 999999999999999999999999999999874
No 38
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.46 E-value=2.7e-13 Score=126.08 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=89.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDY----------DRAEECFKRAIQSDPPDAEALSQYADFLWL 484 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~----------deAEe~feRALeLDPndAeAl~NLA~~L~~ 484 (540)
+.+.|++|...|++|++++|+++++|.++|.++.. .+++ ++|+..|++||+++|+++++|+++|.+|..
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 34779999999999999999999999999998874 7664 699999999999999999999999998875
Q ss_pred Hc----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 009204 485 VR----------KDLWAAEETYQQAMAAEPNSSSYASKYASF 516 (540)
Q Consensus 485 ~r----------GD~EEAee~feKALeLDPdnpeal~NLA~~ 516 (540)
.. |++++|+++|++|++++|++..++.++..+
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 42 589999999999999999999887766543
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.45 E-value=3.5e-13 Score=121.98 Aligned_cols=107 Identities=12% Similarity=0.163 Sum_probs=100.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH-------HHHHHHHHHHHHHcC
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA-------EALSQYADFLWLVRK 487 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA-------eAl~NLA~~L~~~rG 487 (540)
..|++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++ .++.++|.++. ..|
T Consensus 54 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~-~~~ 131 (228)
T 4i17_A 54 NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYR-DMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQ-QAG 131 (228)
T ss_dssp HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHH-HTT
T ss_pred HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHH-Hhc
Confidence 3489999999999999999999999999999998 49999999999999999999999 66999998776 479
Q ss_pred CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCC
Q 009204 488 DLWAAEETYQQAMAAEPN--SSSYASKYASFLWNTGGE 523 (540)
Q Consensus 488 D~EEAee~feKALeLDPd--npeal~NLA~~L~~~GR~ 523 (540)
++++|+++|++|++++|+ ++.++.++|.++...|+.
T Consensus 132 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 132 NIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp CHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 999999999999999886
No 40
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.43 E-value=1.3e-12 Score=111.74 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH-------HHHHHHHHHHHHHcC
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA-------EALSQYADFLWLVRK 487 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA-------eAl~NLA~~L~~~rG 487 (540)
..|+|++|+.+|++||+++|+++.++.|+|.++. .+|++++|+++|++||+++|++. .++.++|.++. ..|
T Consensus 20 ~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~-~~~ 97 (127)
T 4gcn_A 20 KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYF-EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQ-KQN 97 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHH-HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHH-HcC
Confidence 4589999999999999999999999999999998 49999999999999999998874 57888888765 579
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 009204 488 DLWAAEETYQQAMAAEPNSSSYASKYA 514 (540)
Q Consensus 488 D~EEAee~feKALeLDPdnpeal~NLA 514 (540)
++++|+++|++|+..+|+ ++....+.
T Consensus 98 ~~~~A~~~~~kal~~~~~-~~~~~~l~ 123 (127)
T 4gcn_A 98 DLSLAVQWFHRSLSEFRD-PELVKKVK 123 (127)
T ss_dssp CHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCcC-HHHHHHHH
Confidence 999999999999999986 55554443
No 41
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.43 E-value=1.4e-12 Score=108.03 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=92.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~~~~~~A~~~ 99 (137)
T 3q49_B 22 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLE-MESYDEAIAN 99 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-HhhHHHHHHH
Confidence 489999999999999999999999999999988 49999999999999999999999999999998764 7999999999
Q ss_pred HHHHHHhCCC-----CHHHHHHHHHHHHH
Q 009204 496 YQQAMAAEPN-----SSSYASKYASFLWN 519 (540)
Q Consensus 496 feKALeLDPd-----npeal~NLA~~L~~ 519 (540)
|+++++++|+ +..+...+..+...
T Consensus 100 ~~~a~~~~p~~~~~~~~~~~~~l~~~~~~ 128 (137)
T 3q49_B 100 LQRAYSLAKEQRLNFGDDIPSALRIAKKK 128 (137)
T ss_dssp HHHHHHHHHHTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHChhHHHHHHHHHHHHHHHHHHH
Confidence 9999999998 77777777665544
No 42
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.43 E-value=1.1e-12 Score=110.97 Aligned_cols=109 Identities=14% Similarity=0.060 Sum_probs=102.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++..+|.++. ..|++++|+++|+++++++|+++.++.++|.++.. .|++++|+++
T Consensus 21 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~ 98 (186)
T 3as5_A 21 AGRYSQAVMLLEQVYDADAFDVDVALHLGIAYV-KTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQ-VQKYDLAVPL 98 (186)
T ss_dssp HTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCccChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHH
Confidence 389999999999999999999999999999988 49999999999999999999999999999998764 7899999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
|+++++.+|+++.++..+|.++...|++++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A 129 (186)
T 3as5_A 99 LIKVAEANPINFNVRFRLGVALDNLGRFDEA 129 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCcHhHHHHHHHHHHHHHcCcHHHH
Confidence 9999999999999999999999999998753
No 43
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.43 E-value=2.5e-12 Score=114.74 Aligned_cols=110 Identities=15% Similarity=0.061 Sum_probs=101.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.
T Consensus 103 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~ 180 (243)
T 2q7f_A 103 VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPYLQRAVELNENDTEARFQFGMCLAN-EGMLDEALS 180 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCCHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-cCCHHHHHH
Confidence 3489999999999999999999999999999888 49999999999999999999999999999988764 789999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++.+|+++.++..+|.++...|++++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 212 (243)
T 2q7f_A 181 QFAAVTEQDPGHADAFYNAGVTYAYKENREKA 212 (243)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHccCHHHH
Confidence 99999999999999999999999999998753
No 44
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.42 E-value=1.8e-12 Score=125.77 Aligned_cols=110 Identities=21% Similarity=0.221 Sum_probs=98.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|...|++++..+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++.. .|++++|++
T Consensus 215 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~ 292 (388)
T 1w3b_A 215 EARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY-EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE-KGSVAEAED 292 (388)
T ss_dssp TTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHH-HSCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHH
Confidence 4588899999999999999999999999999888 49999999999999999999999999999987654 788999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++++|+++.++.++|.++...|+++++
T Consensus 293 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 324 (388)
T 1w3b_A 293 CYNTALRLCPTHADSLNNLANIKREQGNIEEA 324 (388)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHhhCcccHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999998764
No 45
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.42 E-value=1.1e-12 Score=136.96 Aligned_cols=114 Identities=18% Similarity=0.127 Sum_probs=103.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 009204 414 DDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 414 d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAe 493 (540)
...|++++|+.+|++|++++|+++.++.++|.++. .+|++++|+++|++|++++|+++.++.++|.++.. .|++++|+
T Consensus 17 ~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~-~g~~~eA~ 94 (477)
T 1wao_1 17 FKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAASNMA-LGKFRAAL 94 (477)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH-HTCHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 35699999999999999999999999999999988 49999999999999999999999999999998765 78999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHH--HHHcCCCcccccC
Q 009204 494 ETYQQAMAAEPNSSSYASKYASF--LWNTGGEETCFPL 529 (540)
Q Consensus 494 e~feKALeLDPdnpeal~NLA~~--L~~~GR~Et~~pl 529 (540)
++|++|++++|+++.++.+++.+ +..+|++++|-..
T Consensus 95 ~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~ 132 (477)
T 1wao_1 95 RDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAG 132 (477)
T ss_dssp HHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC---
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999998 8888888765443
No 46
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.42 E-value=3.1e-12 Score=114.16 Aligned_cols=109 Identities=14% Similarity=0.152 Sum_probs=103.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++..+|.++. ..|++++|+.+
T Consensus 70 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~ 147 (243)
T 2q7f_A 70 VNELERALAFYDKALELDSSAATAYYGAGNVYV-VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV-KLEQPKLALPY 147 (243)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH-HTSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhccHHHHHHH
Confidence 489999999999999999999999999999988 4999999999999999999999999999999776 47999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
|+++++.+|+++.++..+|.++...|++++|
T Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 178 (243)
T 2q7f_A 148 LQRAVELNENDTEARFQFGMCLANEGMLDEA 178 (243)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHhCCccHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999998753
No 47
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.42 E-value=2.1e-12 Score=125.29 Aligned_cols=110 Identities=21% Similarity=0.243 Sum_probs=104.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|++
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~ 326 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALK-EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKR-EQGNIEEAVR 326 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH-HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HcCCHHHHHH
Confidence 3589999999999999999999999999999988 4999999999999999999999999999998765 5799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++++|+++.++.++|.++...|+++++
T Consensus 327 ~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 358 (388)
T 1w3b_A 327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEA 358 (388)
T ss_dssp HHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999874
No 48
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.42 E-value=5.3e-12 Score=103.51 Aligned_cols=105 Identities=18% Similarity=0.112 Sum_probs=93.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHcCCH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP---LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD---AEALSQYADFLWLVRKDL 489 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np---~allNLA~~L~~~~GD~deAEe~feRALeLDPnd---AeAl~NLA~~L~~~rGD~ 489 (540)
.|++++|...|+++++.+|+++ .+++++|.++. ..|++++|+.+|+++++.+|++ +.++.++|.++. ..|++
T Consensus 15 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~-~~g~~ 92 (129)
T 2xev_A 15 NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQY-GEGKN 92 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCH
T ss_pred hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-HcCCH
Confidence 4899999999999999999999 79999999988 4999999999999999999999 999999999876 47999
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 490 WAAEETYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 490 EEAee~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
++|+.+|+++++..|+++.+......+-.-.++
T Consensus 93 ~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 93 TEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 999999999999999999887777666554444
No 49
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.7e-12 Score=116.22 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=95.0
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETY 496 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~f 496 (540)
|++++|...|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|
T Consensus 119 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~ 196 (258)
T 3uq3_A 119 RNAEKELKKAEAEAYVNPEKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALA-KLMSFPEAIADC 196 (258)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCcchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HhCCHHHHHHHH
Confidence 44555555555555588999999999999988 4999999999999999999999999999999876 479999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 497 QQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 497 eKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+++++++|+++.++..+|.++..+|++++|
T Consensus 197 ~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 197 NKAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999999999999999999998753
No 50
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.41 E-value=2e-12 Score=122.89 Aligned_cols=109 Identities=16% Similarity=0.110 Sum_probs=103.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+++
T Consensus 230 ~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~ 307 (368)
T 1fch_A 230 SGEYDKAVDCFTAALSVRPNDYLLWNKLGATLA-NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCIN-LGAHREAVEH 307 (368)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-CCCHHHHHHH
Confidence 489999999999999999999999999999988 49999999999999999999999999999998765 7999999999
Q ss_pred HHHHHHhCCCC-----------HHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMAAEPNS-----------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPdn-----------peal~NLA~~L~~~GR~Et~ 526 (540)
|+++++++|++ +.+|.++|.++..+|+++++
T Consensus 308 ~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 349 (368)
T 1fch_A 308 FLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAY 349 (368)
T ss_dssp HHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGH
T ss_pred HHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhH
Confidence 99999999998 89999999999999999864
No 51
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.41 E-value=6.4e-13 Score=120.79 Aligned_cols=107 Identities=15% Similarity=0.071 Sum_probs=72.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+.+
T Consensus 56 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~g~~~~A~~~ 133 (275)
T 1xnf_A 56 LGLRALARNDFSQALAIRPDMPEVFNYLGIYLT-QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYY-GGRDKLAQDD 133 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHH-hccHHHHHHH
Confidence 467777777777777777777777777777666 37777777777777777777777777777766543 5677777777
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
|+++++++|+++.....++.. ...|++++
T Consensus 134 ~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~ 162 (275)
T 1xnf_A 134 LLAFYQDDPNDPFRSLWLYLA-EQKLDEKQ 162 (275)
T ss_dssp HHHHHHHCTTCHHHHHHHHHH-HHHHCHHH
T ss_pred HHHHHHhCCCChHHHHHHHHH-HHhcCHHH
Confidence 777777777776555544433 34455543
No 52
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.40 E-value=8.9e-13 Score=136.44 Aligned_cols=109 Identities=12% Similarity=0.007 Sum_probs=99.3
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc--------CCHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVT--------KDYDRAEECFKRAIQSDP---PDAEALSQYADFLWLV 485 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~--------GD~deAEe~feRALeLDP---ndAeAl~NLA~~L~~~ 485 (540)
|++++|+.+|++|++++|+++.+++++|.++.. . |++++|+++|++|++++| +++.++.++|.++..
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~- 270 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLS-LYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKY- 270 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHH-
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-HHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH-
Confidence 889999999999999999999999999998884 7 899999999999999999 999999999987764
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcccc
Q 009204 486 RKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETCF 527 (540)
Q Consensus 486 rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~~ 527 (540)
.|++++|+++|++|++++|+++.++.+++.++..+|+++++.
T Consensus 271 ~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi 312 (474)
T 4abn_A 271 EESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLL 312 (474)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999887654
No 53
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.40 E-value=5.5e-12 Score=110.56 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=83.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc-CCHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHHcCCHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVT-KDYDRAEECFKRAIQ--SDPPDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~-GD~deAEe~feRALe--LDPndAeAl~NLA~~L~~~rGD~EEA 492 (540)
.|++++|..+|+++++.+|+++.++.++|.++. .. |++++|+.+|+++++ .+|++..++.++|.++. ..|++++|
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A 132 (225)
T 2vq2_A 55 LKVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSA-KQGQFGLA 132 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHH-HTTCHHHH
T ss_pred cCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHH-HcCCHHHH
Confidence 377788888888888888888888888887777 47 888888888888887 56666777777777655 36778888
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 493 EETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+.+|+++++.+|+++.++..+|.++...|++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 165 (225)
T 2vq2_A 133 EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGD 165 (225)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHH
Confidence 888888888888888888888888888887664
No 54
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.40 E-value=2.1e-12 Score=114.73 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=97.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|++++ +| ++.++.++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+++
T Consensus 19 ~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~-~~~~~~A~~~ 93 (213)
T 1hh8_A 19 KKDWKGALDAFSAVQ--DP-HSRICFNIGCMYT-ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQ-TEKYDLAIKD 93 (213)
T ss_dssp TTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred hCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cccHHHHHHH
Confidence 489999999999996 45 7899999999988 49999999999999999999999999999998764 7999999999
Q ss_pred HHHHHHhCCCCH----------------HHHHHHHHHHHHcCCCcc
Q 009204 496 YQQAMAAEPNSS----------------SYASKYASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnp----------------eal~NLA~~L~~~GR~Et 525 (540)
|++++++.|++. .++.++|.++..+|++++
T Consensus 94 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 139 (213)
T 1hh8_A 94 LKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK 139 (213)
T ss_dssp HHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH
Confidence 999999998877 999999999999999763
No 55
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.39 E-value=1.1e-12 Score=136.74 Aligned_cols=128 Identities=12% Similarity=0.075 Sum_probs=109.4
Q ss_pred CCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHH
Q 009204 395 LDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEA 474 (540)
Q Consensus 395 LD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeA 474 (540)
++|+....+...+.+. ...|++++|..+|+++++++|+++.++.++|.++. ..|++++|+++|++|++++|+++.+
T Consensus 18 ~~p~~~~~~~~lg~~~---~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~ 93 (568)
T 2vsy_A 18 HRPQDFVAWLMLADAE---LGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRW-TQQRHAEAAVLLQQASDAAPEHPGI 93 (568)
T ss_dssp ---CCHHHHHHHHHHH---HHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hCCCCHHHHHHHHHHH---HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCCHHH
Confidence 3444444444433332 24589999999999999999999999999999988 4999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc---CCCcccc
Q 009204 475 LSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNT---GGEETCF 527 (540)
Q Consensus 475 l~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~---GR~Et~~ 527 (540)
+.++|.++. ..|++++|+++|++|++++|+++.++.++|.++..+ |+++++.
T Consensus 94 ~~~la~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~ 148 (568)
T 2vsy_A 94 ALWLGHALE-DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLS 148 (568)
T ss_dssp HHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHH
T ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHH
Confidence 999999876 479999999999999999999999999999999999 8877643
No 56
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.39 E-value=3.3e-12 Score=102.72 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=95.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHHcCC
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD-------AEALSQYADFLWLVRKD 488 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd-------AeAl~NLA~~L~~~rGD 488 (540)
.|++++|..+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|++ +.++.++|.++.. .|+
T Consensus 17 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~ 94 (131)
T 1elr_A 17 KKDFDTALKHYDKAKELDPTNMTYITNQAAVYF-EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFK-EEK 94 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH-TTC
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH-hcc
Confidence 489999999999999999999999999999988 4999999999999999999888 9999999998764 799
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009204 489 LWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGE 523 (540)
Q Consensus 489 ~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~ 523 (540)
+++|+++|+++++++| ++..+..++.++...++.
T Consensus 95 ~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 95 YKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 9999999999999999 688999998887766543
No 57
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=2e-12 Score=107.26 Aligned_cols=91 Identities=15% Similarity=0.065 Sum_probs=84.4
Q ss_pred CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009204 434 PNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKY 513 (540)
Q Consensus 434 P~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NL 513 (540)
|.++..+.++|..++ ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|++|++++|+++.+++++
T Consensus 1 p~~a~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (126)
T 3upv_A 1 SMKAEEARLEGKEYF-TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAK-LMSFPEAIADCNKAIEKDPNFVRAYIRK 78 (126)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 456788999999999 49999999999999999999999999999998764 7999999999999999999999999999
Q ss_pred HHHHHHcCCCccc
Q 009204 514 ASFLWNTGGEETC 526 (540)
Q Consensus 514 A~~L~~~GR~Et~ 526 (540)
|.++..+|++++|
T Consensus 79 g~~~~~~~~~~~A 91 (126)
T 3upv_A 79 ATAQIAVKEYASA 91 (126)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHHHhCHHHH
Confidence 9999999998753
No 58
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.39 E-value=2.7e-12 Score=133.70 Aligned_cols=132 Identities=13% Similarity=0.014 Sum_probs=99.8
Q ss_pred HHHHHHhhchhhhhh----ccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC
Q 009204 378 SVLDEALRIQEESEY----RILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKD 453 (540)
Q Consensus 378 ~~L~eap~~q~~~~~----eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD 453 (540)
.+..+..+..++..+ ..++|+....+...+.+. ...|++++|..+|+++++.+|+++.++.++|.++. ..|+
T Consensus 31 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~---~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~g~ 106 (568)
T 2vsy_A 31 DAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVR---WTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALE-DAGQ 106 (568)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH---HHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HcCC
Confidence 344444444444333 144555555554444333 24588999999999999999999999999999888 4999
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 009204 454 YDRAEECFKRAIQSDPPDAEALSQYADFLWLVR---KDLWAAEETYQQAMAAEPNSSSYASKYA 514 (540)
Q Consensus 454 ~deAEe~feRALeLDPndAeAl~NLA~~L~~~r---GD~EEAee~feKALeLDPdnpeal~NLA 514 (540)
+++|+++|++|++++|+++.++.++|.++. .. |++++|+++|+++++.+|++...+..++
T Consensus 107 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 107 AEAAAAAYTRAHQLLPEEPYITAQLLNWRR-RLCDWRALDVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCCTTHHHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhhccccHHHHHHHHHHHHhcCCcccChHHHhC
Confidence 999999999999999999999999998765 46 8899999999999999998877766655
No 59
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.39 E-value=4.1e-12 Score=121.92 Aligned_cols=108 Identities=19% Similarity=0.167 Sum_probs=87.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC---------------------------
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSD--------------------------- 468 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLD--------------------------- 468 (540)
.|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+++|+++++++
T Consensus 112 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~ 190 (365)
T 4eqf_A 112 NENEQAAIVALQRCLELQPNNLKALMALAVSYT-NTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDS 190 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCHHHHCC-------------------CC
T ss_pred CCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-ccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhh
Confidence 377888888888888888888888888877776 3777777766666666554
Q ss_pred -----------------CC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 469 -----------------PP--DAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 469 -----------------Pn--dAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
|+ ++.++.++|.++.. .|++++|+++|+++++++|+++.++.++|.++...|++++
T Consensus 191 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 265 (365)
T 4eqf_A 191 SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL-SGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEE 265 (365)
T ss_dssp HHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 44 78889999987664 6899999999999999999999999999999999999874
No 60
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.39 E-value=3e-13 Score=119.66 Aligned_cols=125 Identities=9% Similarity=-0.046 Sum_probs=84.3
Q ss_pred CHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHH
Q 009204 396 DHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEAL 475 (540)
Q Consensus 396 D~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl 475 (540)
+|+....+...+.+.+ ..|++++|+.+|+++++.+| ++..+..++.+.....++..+|+.+|+++++++|+++.++
T Consensus 36 ~P~~~~a~~~la~~~~---~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~ 111 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLL---ETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELA 111 (176)
T ss_dssp HHTSHHHHHHHHHHHH---HTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHH
T ss_pred CCCcHHHHHHHHHHHH---HCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHH
Confidence 5544444444333322 34777777777777777777 7766655554433223334457778888888888888888
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCCcc
Q 009204 476 SQYADFLWLVRKDLWAAEETYQQAMAAEPNS--SSYASKYASFLWNTGGEET 525 (540)
Q Consensus 476 ~NLA~~L~~~rGD~EEAee~feKALeLDPdn--peal~NLA~~L~~~GR~Et 525 (540)
.++|.++. ..|++++|+.+|+++++++|++ +.++.++|.++..+|+.++
T Consensus 112 ~~la~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 162 (176)
T 2r5s_A 112 CELAVQYN-QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNA 162 (176)
T ss_dssp HHHHHHHH-HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCH
T ss_pred HHHHHHHH-HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCc
Confidence 88887665 4677888888888888888765 5578888888888887765
No 61
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.38 E-value=6.2e-13 Score=144.29 Aligned_cols=107 Identities=17% Similarity=0.016 Sum_probs=100.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|+..|+++++.+|+++.+++++|.++. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++ +++
T Consensus 446 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~-~g~~~~-~~~ 522 (681)
T 2pzi_A 446 LGDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LTGDYDSATKHFTEVLDTFPGELAPKLALAATAEL-AGNTDE-HKF 522 (681)
T ss_dssp HTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHH-HTCCCT-TCH
T ss_pred cCCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHH-cCChHH-HHH
Confidence 489999999999999999999999999999988 49999999999999999999999999999998764 789999 999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
|++|++++|+++.+++++|.++..+|++++
T Consensus 523 ~~~al~~~P~~~~a~~~lg~~~~~~g~~~~ 552 (681)
T 2pzi_A 523 YQTVWSTNDGVISAAFGLARARSAEGDRVG 552 (681)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999874
No 62
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.38 E-value=2.9e-12 Score=121.72 Aligned_cols=109 Identities=17% Similarity=0.270 Sum_probs=102.8
Q ss_pred CCCHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPN--NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~--Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAe 493 (540)
.|++++|..+|+++++.+|+ ++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+
T Consensus 194 ~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~g~~~~A~ 271 (368)
T 1fch_A 194 DSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFN-LSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLAN-GNQSEEAV 271 (368)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-cCCHHHHH
Confidence 37899999999999999999 8999999999988 49999999999999999999999999999998764 79999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 494 ETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 494 e~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.+|+++++++|+++.++.++|.++..+|++++|
T Consensus 272 ~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 304 (368)
T 1fch_A 272 AAYRRALELQPGYIRSRYNLGISCINLGAHREA 304 (368)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 999999999999999999999999999998753
No 63
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.38 E-value=4.8e-12 Score=110.90 Aligned_cols=109 Identities=22% Similarity=0.233 Sum_probs=101.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHc-CCHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVR-KDLWAAEE 494 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~r-GD~EEAee 494 (540)
.|++++|..+|+++++.+|+++.++..+|.++. ..|++++|.++|+++++++|+++.++.++|.++. .. |++++|+.
T Consensus 21 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~~A~~ 98 (225)
T 2vq2_A 21 GQDYRQATASIEDALKSDPKNELAWLVRAEIYQ-YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC-GRLNRPAESMA 98 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCCHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhcCcHHHHHH
Confidence 489999999999999999999999999999988 4999999999999999999999999999999775 57 89999999
Q ss_pred HHHHHHH--hCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMA--AEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALe--LDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++ .+|.++.++.++|.++...|++++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 132 (225)
T 2vq2_A 99 YFDKALADPTYPTPYIANLNKGICSAKQGQFGLA 132 (225)
T ss_dssp HHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHH
Confidence 9999999 7778889999999999999998753
No 64
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.38 E-value=3.1e-12 Score=123.28 Aligned_cols=108 Identities=17% Similarity=0.083 Sum_probs=82.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHH----------------------------------H
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEEC----------------------------------F 461 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~----------------------------------f 461 (540)
.|++++|+..|+++++.+|+++.+++++|.++.. .|++++|+.+ |
T Consensus 130 ~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l 208 (287)
T 3qou_A 130 ESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQL 208 (287)
T ss_dssp TTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHH
Confidence 4788888888888888888888888888887774 8887776554 5
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHHHHHHHHcCCCcc
Q 009204 462 KRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNS--SSYASKYASFLWNTGGEET 525 (540)
Q Consensus 462 eRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdn--peal~NLA~~L~~~GR~Et 525 (540)
+++++++|++++++.++|.++. ..|++++|++.|+++++.+|++ +.++.+++.++..+|+.++
T Consensus 209 ~~al~~~P~~~~~~~~la~~l~-~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~ 273 (287)
T 3qou_A 209 QQQVAENPEDAALATQLALQLH-QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDA 273 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhcCCccHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCc
Confidence 5556677777888877877655 4677888888888888888877 7777788888877777654
No 65
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.38 E-value=5.9e-12 Score=116.72 Aligned_cols=108 Identities=13% Similarity=0.039 Sum_probs=99.3
Q ss_pred CC-CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 416 YM-DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 416 ~G-d~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
.| ++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|++..++..+|.++. ..|++++|++
T Consensus 103 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~ 180 (330)
T 3hym_B 103 VGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFA-VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYG-LTNNSKLAER 180 (330)
T ss_dssp SCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHH-HTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHH-HHhhHHHHHH
Confidence 36 8999999999999999999999999999888 4999999999999999999999999999998776 4789999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|+++++.+|+++.++.++|.++...|++++
T Consensus 181 ~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~ 211 (330)
T 3hym_B 181 FFSQALSIAPEDPFVMHEVGVVAFQNGEWKT 211 (330)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHcccHHH
Confidence 9999999999999999999999999999764
No 66
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.37 E-value=5.4e-12 Score=114.23 Aligned_cols=108 Identities=22% Similarity=0.234 Sum_probs=90.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ--SDPPDAEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALe--LDPndAeAl~NLA~~L~~~rGD~EEAe 493 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++ .+|.++.++.++|.++. ..|++++|+
T Consensus 84 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~ 161 (252)
T 2ho1_A 84 EMEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSL-QMKKPAQAK 161 (252)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH-HTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH-HcCCHHHHH
Confidence 478888888888888888888888888888877 48888888888888888 78888888888888765 468888888
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 494 ETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 494 e~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++|+++++.+|+++.++..+|.++...|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 193 (252)
T 2ho1_A 162 EYFEKSLRLNRNQPSVALEMADLLYKEREYVP 193 (252)
T ss_dssp HHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhcCcccHHHHHHHHHHHHHcCCHHH
Confidence 88888888888888888888888888888764
No 67
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.37 E-value=1.3e-12 Score=134.96 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=97.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNN---------------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYAD 480 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~N---------------p~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~ 480 (540)
.++|++|..+|++|++++|++ ..+|+|+|.++. ..|++++|+.+|++||+++|+++.+|+++|.
T Consensus 281 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~ 359 (457)
T 1kt0_A 281 GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYL-KLREYTKAVECCDKALGLDSANEKGLYRRGE 359 (457)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence 489999999999999999999 799999999988 5999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 481 FLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 481 ~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
++.. .|++++|+.+|++|++++|+++.++.+++.++..+|+++
T Consensus 360 a~~~-~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 360 AQLL-MNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHN 402 (457)
T ss_dssp HHHH-TTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred HHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 8765 799999999999999999999999999999999888754
No 68
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.36 E-value=6.1e-12 Score=116.50 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=102.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++.. .|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+++
T Consensus 185 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~ 262 (327)
T 3cv0_A 185 SNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALDAYNRALDINPGYVRVMYNMAVSYS-NMSQYDLAAKQ 262 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhccHHHHHHH
Confidence 4899999999999999999999999999999984 999999999999999999999999999999876 47999999999
Q ss_pred HHHHHHhCCC------------CHHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMAAEPN------------SSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPd------------npeal~NLA~~L~~~GR~Et~ 526 (540)
|+++++++|+ ++.++.++|.++..+|+++++
T Consensus 263 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 305 (327)
T 3cv0_A 263 LVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLV 305 (327)
T ss_dssp HHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHH
Confidence 9999999999 899999999999999998753
No 69
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.36 E-value=5.6e-12 Score=116.89 Aligned_cols=108 Identities=12% Similarity=0.003 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK-DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G-D~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
.|++++|..+|+++++.+|+++.++..+|.++.. .| ++++|+++|+++++++|+++.++..+|.++.. .|++++|+.
T Consensus 69 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~ 146 (330)
T 3hym_B 69 LNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLM-VGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAV-ESEHDQAMA 146 (330)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHH-SCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHH-HTCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-ccCHHHHHH
Confidence 3899999999999999999999999999999884 88 99999999999999999999999999998764 789999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|+++++++|++...+..+|.++...|++++
T Consensus 147 ~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (330)
T 3hym_B 147 AYFTAAQLMKGCHLPMLYIGLEYGLTNNSKL 177 (330)
T ss_dssp HHHHHHHHTTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999999999999999874
No 70
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.36 E-value=6.5e-12 Score=116.29 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=103.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|+++.++..+|.++. ..|++++|+++|+++++++|+++.++.++|.++.. .|++++|+.
T Consensus 150 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~ 227 (327)
T 3cv0_A 150 APNEYRECRTLLHAALEMNPNDAQLHASLGVLYN-LSNNYDSAAANLRRAVELRPDDAQLWNKLGATLAN-GNRPQEALD 227 (327)
T ss_dssp SHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHH
T ss_pred HcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHH
Confidence 4488999999999999999999999999999988 49999999999999999999999999999998764 799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++.+|+++.++.++|.++...|++++|
T Consensus 228 ~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A 259 (327)
T 3cv0_A 228 AYNRALDINPGYVRVMYNMAVSYSNMSQYDLA 259 (327)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999999999999998753
No 71
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.36 E-value=7.5e-12 Score=103.66 Aligned_cols=94 Identities=16% Similarity=0.108 Sum_probs=86.0
Q ss_pred HcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009204 431 AEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYA 510 (540)
Q Consensus 431 alDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal 510 (540)
..+|.++..+.++|..++ ..|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++
T Consensus 3 ~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp ---CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 457889999999999999 4999999999999999999999999999999876 47999999999999999999999999
Q ss_pred HHHHHHHHHcCCCccc
Q 009204 511 SKYASFLWNTGGEETC 526 (540)
Q Consensus 511 ~NLA~~L~~~GR~Et~ 526 (540)
.++|.++..+|++++|
T Consensus 81 ~~l~~~~~~~~~~~~A 96 (137)
T 3q49_B 81 FFLGQCQLEMESYDEA 96 (137)
T ss_dssp HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhhHHHH
Confidence 9999999999998753
No 72
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.36 E-value=4.1e-12 Score=115.01 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++..+|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+++
T Consensus 50 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~ 127 (252)
T 2ho1_A 50 RGNTEQAKVPLRKALEIDPSSADAHAALAVVFQ-TEMEPKLADEEYRKALASDSRNARVLNNYGGFLY-EQKRYEEAYQR 127 (252)
T ss_dssp TTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred cCChHHHHHHHHHHHhcCCChHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH-HHhHHHHHHHH
Confidence 378999999999999999999999999999988 4999999999999999999999999999999876 47999999999
Q ss_pred HHHHHH--hCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMA--AEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALe--LDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
|++++. .+|.++.++.++|.++...|++++|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 160 (252)
T 2ho1_A 128 LLEASQDTLYPERSRVFENLGLVSLQMKKPAQA 160 (252)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCccCcccHHHHHHHHHHHHHcCCHHHH
Confidence 999999 8999999999999999999998753
No 73
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.36 E-value=6e-12 Score=103.35 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 009204 421 RTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500 (540)
Q Consensus 421 eAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKAL 500 (540)
+|...|+++++.+|+++.+++++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+|++++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A~~~~~~al 80 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQG-QGDRAGARQAWESGL 80 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Confidence 5788999999999999999999999988 49999999999999999999999999999998764 799999999999999
Q ss_pred HhCC--CCHHHHHHHHHHHHHcCCC
Q 009204 501 AAEP--NSSSYASKYASFLWNTGGE 523 (540)
Q Consensus 501 eLDP--dnpeal~NLA~~L~~~GR~ 523 (540)
+++| .+......+...+..+++.
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 81 AAAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HhccccccHHHHHHHHHHHHHhccc
Confidence 9998 4667777777777776654
No 74
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.35 E-value=3.2e-12 Score=116.72 Aligned_cols=106 Identities=16% Similarity=0.184 Sum_probs=74.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHHcCCHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA----EALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA----eAl~NLA~~L~~~rGD~EE 491 (540)
.|++++|...|+++++.+|+++.++.++|.++. ..|++++|+++|+++++ .|+++ .++.++|.++. ..|++++
T Consensus 16 ~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~-~~~~~~~ 92 (272)
T 3u4t_A 16 NNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYY-ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILM-KKGQDSL 92 (272)
T ss_dssp TTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHH-HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHH-HTTCHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHH-HcccHHH
Confidence 367777777777777777777777777777666 37777777777777777 34333 33667776654 3567777
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 492 AEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 492 Aee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
|+++|+++++++|+++.++.++|.++...|+++
T Consensus 93 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~ 125 (272)
T 3u4t_A 93 AIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFP 125 (272)
T ss_dssp HHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHccCHH
Confidence 777777777777777777777777777777765
No 75
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.35 E-value=1.1e-11 Score=113.19 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=64.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWL 484 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~ 484 (540)
..|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.+++.
T Consensus 66 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~ 134 (208)
T 3urz_A 66 KNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQV-CRGQEKDALRMYEKILQLEADNLAANIFLGNYYYL 134 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 4599999999999999999999999999999998 59999999999999999999999999999987643
No 76
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.35 E-value=1.5e-12 Score=134.82 Aligned_cols=104 Identities=19% Similarity=0.115 Sum_probs=84.6
Q ss_pred cCCHHHHHhcccccccccCC-----CCCCCHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q 009204 394 ILDHETMQHFVTPVTVKLEP-----DDYMDYFRTDLLYQMGVAEEP---NNPLLLLNYAQFLHLVTKDYDRAEECFKRAI 465 (540)
Q Consensus 394 aLD~e~~~~lvapv~a~Le~-----d~~Gd~eeAe~lYqkALalDP---~Np~allNLA~~L~~~~GD~deAEe~feRAL 465 (540)
.++|+....+...+.+.+.. .+.|++++|..+|++|++++| +++.+++++|.++. ..|++++|+++|++|+
T Consensus 207 ~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al 285 (474)
T 4abn_A 207 QMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHK-YEESYGEALEGFSQAA 285 (474)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHH
Confidence 34555555555544443321 112789999999999999999 99999999999998 4999999999999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 009204 466 QSDPPDAEALSQYADFLWLVRKDLWAAEETYQQA 499 (540)
Q Consensus 466 eLDPndAeAl~NLA~~L~~~rGD~EEAee~feKA 499 (540)
+++|+++.++.+++.++.. .|++++|++.+.+.
T Consensus 286 ~l~p~~~~a~~~l~~~~~~-lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 286 ALDPAWPEPQQREQQLLEF-LSRLTSLLESKGKT 318 (474)
T ss_dssp HHCTTCHHHHHHHHHHHHH-HHHHHHHHHHTTTC
T ss_pred HhCCCCHHHHHHHHHHHHH-HHHHHHHHHHhccc
Confidence 9999999999999987754 67899999887665
No 77
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.35 E-value=4.5e-12 Score=137.56 Aligned_cols=109 Identities=12% Similarity=-0.065 Sum_probs=102.8
Q ss_pred CCCCHHHHHHHHHHHH--------HcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHc
Q 009204 415 DYMDYFRTDLLYQMGV--------AEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVR 486 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkAL--------alDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~r 486 (540)
..+++++|+..|++++ +.+|+++.+++++|.++.. .|++++|++.|++|++++|+++.+++++|.++.. .
T Consensus 403 ~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~-~ 480 (681)
T 2pzi_A 403 VLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLD-LGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL-T 480 (681)
T ss_dssp TTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-H
T ss_pred cccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHh-cCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH-c
Confidence 4589999999999999 9999999999999999984 9999999999999999999999999999998764 7
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 487 KDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 487 GD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
|++++|+++|++|++++|+++.++.++|.++..+|++++
T Consensus 481 g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 481 GDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred CCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH
Confidence 999999999999999999999999999999999999876
No 78
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.35 E-value=4.6e-12 Score=110.20 Aligned_cols=91 Identities=16% Similarity=0.114 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 009204 433 EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASK 512 (540)
Q Consensus 433 DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~N 512 (540)
++.++..+.++|..++ ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+.+|++|++++|+++.++++
T Consensus 7 ~~~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAM-ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSA-SGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp CCHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 5667889999999999 49999999999999999999999999999998764 799999999999999999999999999
Q ss_pred HHHHHHHcCCCcc
Q 009204 513 YASFLWNTGGEET 525 (540)
Q Consensus 513 LA~~L~~~GR~Et 525 (540)
+|.++..+|++++
T Consensus 85 lg~~~~~~g~~~~ 97 (164)
T 3sz7_A 85 LGLARFDMADYKG 97 (164)
T ss_dssp HHHHHHHTTCHHH
T ss_pred HHHHHHHccCHHH
Confidence 9999999999874
No 79
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.35 E-value=7.8e-12 Score=114.11 Aligned_cols=105 Identities=10% Similarity=0.075 Sum_probs=98.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|..++. .+++++|+++
T Consensus 87 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~ 164 (272)
T 3u4t_A 87 KGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFY-NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-NKEYVKADSS 164 (272)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 489999999999999999999999999999998 49999999999999999999999999999933443 5699999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
|+++++++|+++.++..+|.++...|+
T Consensus 165 ~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 165 FVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 999999999999999999999999998
No 80
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.34 E-value=1.2e-11 Score=112.49 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=67.0
Q ss_pred CCCHHHHHHHHHHHHHc----CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHH
Q 009204 416 YMDYFRTDLLYQMGVAE----EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALal----DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EE 491 (540)
.+++++|+..|+++++. +|.++.++.++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~-~~~~~~ 95 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYD-SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ-AGNFDA 95 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH-HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-ccCHHH
Confidence 35666666666666665 2345556666666655 36666666666666666666666666666665443 566666
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 492 AEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 492 Aee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
|+++|+++++++|+++.++.++|.++...|+++
T Consensus 96 A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~ 128 (275)
T 1xnf_A 96 AYEAFDSVLELDPTYNYAHLNRGIALYYGGRDK 128 (275)
T ss_dssp HHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhcCccccHHHHHHHHHHHHhccHH
Confidence 666666666666666666666666666666654
No 81
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.34 E-value=3.8e-12 Score=99.96 Aligned_cols=90 Identities=18% Similarity=0.190 Sum_probs=73.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHc-CCHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPP--DAEALSQYADFLWLVR-KDLWA 491 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPn--dAeAl~NLA~~L~~~r-GD~EE 491 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+ +..++.++|.++. .. |++++
T Consensus 18 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~ 95 (112)
T 2kck_A 18 DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALY-NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALR-YIEGKEVE 95 (112)
T ss_dssp SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHT-TCSSCSHH
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHH-HHhCCHHH
Confidence 4578888888888888888888888888888777 488888888888888888888 8888888887654 57 78888
Q ss_pred HHHHHHHHHHhCCCC
Q 009204 492 AEETYQQAMAAEPNS 506 (540)
Q Consensus 492 Aee~feKALeLDPdn 506 (540)
|++++++++..+|++
T Consensus 96 A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 96 AEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhhcccCC
Confidence 888888888888865
No 82
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.34 E-value=7.9e-12 Score=98.16 Aligned_cols=92 Identities=17% Similarity=0.144 Sum_probs=86.4
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHHH
Q 009204 432 EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPN--SSSY 509 (540)
Q Consensus 432 lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPd--npea 509 (540)
++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+++|+++++++|+ ++.+
T Consensus 1 l~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQY-DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYN-LERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp CCCSSTTGGGGHHHHHH-SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred CCCCcHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH-ccCHHHHHHHHHHHHHhCcccchHHH
Confidence 47999999999999988 59999999999999999999999999999998764 78999999999999999999 9999
Q ss_pred HHHHHHHHHHc-CCCcc
Q 009204 510 ASKYASFLWNT-GGEET 525 (540)
Q Consensus 510 l~NLA~~L~~~-GR~Et 525 (540)
+.++|.++..+ |++++
T Consensus 79 ~~~l~~~~~~~~~~~~~ 95 (112)
T 2kck_A 79 WAAKADALRYIEGKEVE 95 (112)
T ss_dssp HHHHHHHHTTCSSCSHH
T ss_pred HHHHHHHHHHHhCCHHH
Confidence 99999999999 99874
No 83
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.34 E-value=2.8e-12 Score=129.99 Aligned_cols=108 Identities=15% Similarity=0.097 Sum_probs=101.1
Q ss_pred CCCHHHHHHHHHHHHH----------------cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVA----------------EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYA 479 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALa----------------lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA 479 (540)
.+++++|+.+|++|++ .+|.++.++.++|.++. ..|++++|+++|++||+++|+++.++.++|
T Consensus 236 ~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 314 (370)
T 1ihg_A 236 SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEALEIDPSNTKALYRRA 314 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 4899999999999999 88999999999999988 599999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 480 DFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 480 ~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
.++.. .|++++|+++|++|++++|+++.++..++.++..++++++
T Consensus 315 ~~~~~-~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~ 359 (370)
T 1ihg_A 315 QGWQG-LKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKD 359 (370)
T ss_dssp HHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 98764 7999999999999999999999999999999998887653
No 84
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.33 E-value=5.5e-12 Score=112.85 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=101.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH---------------------
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN-------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQ--------------------- 466 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N-------p~allNLA~~L~~~~GD~deAEe~feRALe--------------------- 466 (540)
..|++++|..+|+++++.+|++ +.++.++|.++. ..|++++|+++|+++++
T Consensus 50 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~ 128 (258)
T 3uq3_A 50 EKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYH-KLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKA 128 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHH-HcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHH
Confidence 3489999999999999999987 799999999988 59999999999999999
Q ss_pred -----cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 467 -----SDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 467 -----LDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.+|+++.++.++|.++.. .|++++|+.+|++++..+|+++.++.++|.++...|++++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 192 (258)
T 3uq3_A 129 EAEAYVNPEKAEEARLEGKEYFT-KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEA 192 (258)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcCcchHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHH
Confidence 778888999999998764 79999999999999999999999999999999999998753
No 85
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.32 E-value=1.8e-11 Score=118.97 Aligned_cols=106 Identities=13% Similarity=0.022 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHH--HHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYA--QFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA--~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
|++++|+..|+++++.+|++.......+ .++. ..|++++|+.+|+++++.+|+++.+++++|.++. ..|++++|++
T Consensus 144 g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~-~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~ 221 (291)
T 3mkr_A 144 DRLDLARKELKKMQDQDEDATLTQLATAWVSLAA-GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEG 221 (291)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHH
Confidence 6666666666666666666553332222 2222 2466666666666666666666666666666544 3566666666
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
+|++|++++|++++++.++|.++..+|+.+
T Consensus 222 ~l~~al~~~p~~~~~l~~l~~~~~~~g~~~ 251 (291)
T 3mkr_A 222 VLQEALDKDSGHPETLINLVVLSQHLGKPP 251 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCH
Confidence 666666666666666666666666666653
No 86
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.32 E-value=7.3e-12 Score=120.48 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=76.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL-LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~-allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
.|++++|...|+++++++|+++. +|.++|.++.. .|++++|..+|++|++++|.+..++..++.+.+...|++++|.+
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~ 190 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFK 190 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 36777777777777777777765 77777776663 77777777777777777777776666555443333567777777
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
+|++|++++|+++.+|.+++.++..+|+++
T Consensus 191 ~~~~al~~~p~~~~~~~~~~~~~~~~g~~~ 220 (308)
T 2ond_A 191 IFELGLKKYGDIPEYVLAYIDYLSHLNEDN 220 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCCHH
Confidence 777777777777777777777777777765
No 87
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.32 E-value=4.3e-12 Score=118.01 Aligned_cols=96 Identities=9% Similarity=-0.024 Sum_probs=86.5
Q ss_pred CCCHHHHHHHHHHHHHcCCC-------CHH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHHc-------CCCCHHHH-
Q 009204 416 YMDYFRTDLLYQMGVAEEPN-------NPL-----LLLNYAQFLHLVTKDYDRAEECFKRAIQS-------DPPDAEAL- 475 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~-------Np~-----allNLA~~L~~~~GD~deAEe~feRALeL-------DPndAeAl- 475 (540)
.|+|++|+..|++||+++|+ +.. +|+|+|.++. ..|++++|+.+|++||++ +|+++.+|
T Consensus 24 ~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~-~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~ 102 (159)
T 2hr2_A 24 AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALA-GLRSFDEALHSADKALHYFNRRGELNQDEGKLWI 102 (159)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHH
Confidence 48999999999999999999 444 9999999988 599999999999999999 99999999
Q ss_pred ---HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009204 476 ---SQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKY 513 (540)
Q Consensus 476 ---~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NL 513 (540)
++.|.++. ..|++++|+.+|++|++++|++..+.-.+
T Consensus 103 ~~~~~rG~aL~-~lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 103 SAVYSRALALD-GLGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred HHHHhHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999876 47999999999999999999887554333
No 88
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.32 E-value=1e-11 Score=115.20 Aligned_cols=110 Identities=18% Similarity=0.079 Sum_probs=98.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHH---
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN---PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD---AEALSQYADFLWLV--- 485 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N---p~allNLA~~L~~~~GD~deAEe~feRALeLDPnd---AeAl~NLA~~L~~~--- 485 (540)
..|++++|+..|+++++.+|++ +.+++++|.+++ ..|++++|+.+|+++++++|++ +.++.++|.+++..
T Consensus 27 ~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~ 105 (261)
T 3qky_A 27 NQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYY-QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPP 105 (261)
T ss_dssp HTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCC
T ss_pred HhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccc
Confidence 3489999999999999999999 899999999999 4999999999999999998855 67899999876531
Q ss_pred ----cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCCcc
Q 009204 486 ----RKDLWAAEETYQQAMAAEPNSSSYA-----------------SKYASFLWNTGGEET 525 (540)
Q Consensus 486 ----rGD~EEAee~feKALeLDPdnpeal-----------------~NLA~~L~~~GR~Et 525 (540)
.|++++|+.+|+++++.+|+++.+. +++|.++..+|++++
T Consensus 106 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 166 (261)
T 3qky_A 106 YELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEA 166 (261)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 6899999999999999999987776 888999999999874
No 89
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.32 E-value=1.2e-11 Score=115.20 Aligned_cols=108 Identities=14% Similarity=0.110 Sum_probs=101.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++.. .|++++|+.+
T Consensus 16 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~ 93 (359)
T 3ieg_A 16 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLK-QGKLDEAEDD 93 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHH-cCChHHHHHH
Confidence 489999999999999999999999999999998 49999999999999999999999999999998765 7999999999
Q ss_pred HHHHHHhCC---CCHHHHHHH------------HHHHHHcCCCcc
Q 009204 496 YQQAMAAEP---NSSSYASKY------------ASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDP---dnpeal~NL------------A~~L~~~GR~Et 525 (540)
|+++++++| +++.++..+ |.++...|++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 138 (359)
T 3ieg_A 94 FKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTA 138 (359)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 999999999 999998888 788999999764
No 90
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.31 E-value=5.3e-12 Score=111.61 Aligned_cols=108 Identities=19% Similarity=0.069 Sum_probs=95.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|+..|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++| ++..+..++.+.....++..+|+.+
T Consensus 19 ~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~-~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~ 96 (176)
T 2r5s_A 19 QGEHAQALNVIQTLSDELQSRGDVKLAKADCLL-ETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKR 96 (176)
T ss_dssp TTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHH-HTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH-HCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHH
Confidence 489999999999999999999999999999988 49999999999999999999 8887766665433333334568999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
|+++++++|+++.+++++|.++...|++++
T Consensus 97 ~~~al~~~P~~~~~~~~la~~~~~~g~~~~ 126 (176)
T 2r5s_A 97 LEQELAANPDNFELACELAVQYNQVGRDEE 126 (176)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcccHHH
Confidence 999999999999999999999999999875
No 91
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.31 E-value=2.2e-11 Score=93.97 Aligned_cols=85 Identities=26% Similarity=0.349 Sum_probs=78.7
Q ss_pred CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 009204 435 NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYA 514 (540)
Q Consensus 435 ~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA 514 (540)
.++.++.++|..+. ..|++++|+.+|++|++++|+++.++.++|.++.. .|++++|+.+|+++++++|+++.++.++|
T Consensus 7 ~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~~a~~~~p~~~~~~~~l~ 84 (91)
T 1na3_A 7 NSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAKQNLG 84 (91)
T ss_dssp HHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-HhhHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 46788999999888 49999999999999999999999999999998764 79999999999999999999999999999
Q ss_pred HHHHHcC
Q 009204 515 SFLWNTG 521 (540)
Q Consensus 515 ~~L~~~G 521 (540)
.++..+|
T Consensus 85 ~~~~~~g 91 (91)
T 1na3_A 85 NAKQKQG 91 (91)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9998765
No 92
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.30 E-value=3.1e-11 Score=112.57 Aligned_cols=107 Identities=13% Similarity=0.056 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHHcCC---CCHHHHHHH------------HHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEP---NNPLLLLNY------------AQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADF 481 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP---~Np~allNL------------A~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~ 481 (540)
|++++|...|+++++.+| +++.++..+ |..+. ..|++++|+++|+++++.+|+++.++.++|.+
T Consensus 85 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 163 (359)
T 3ieg_A 85 GKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAF-DGADYTAAITFLDKILEVCVWDAELRELRAEC 163 (359)
T ss_dssp TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 444455555555555444 444444444 23333 24455555555555555555555555555444
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+.. .|++++|+.+|+++++.+|+++.++.++|.++...|++++
T Consensus 164 ~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 206 (359)
T 3ieg_A 164 FIK-EGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHEL 206 (359)
T ss_dssp HHH-TTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHH
T ss_pred HHH-CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 332 4445555555555555555555555555555555554443
No 93
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.29 E-value=2.1e-11 Score=97.09 Aligned_cols=89 Identities=16% Similarity=0.082 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHH
Q 009204 436 NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNS------SSY 509 (540)
Q Consensus 436 Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdn------pea 509 (540)
++.++.++|..++ ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+++|+++++++|++ ..+
T Consensus 3 ~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~~~ 80 (111)
T 2l6j_A 3 QFEKQKEQGNSLF-KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIK-LGEYTQAIQMCQQGLRYTSTAEHVAIRSKL 80 (111)
T ss_dssp HHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTSCSSTTSHHHHHHH
T ss_pred hHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCccHHHHHHHH
Confidence 4678899999988 59999999999999999999999999999998764 799999999999999999999 999
Q ss_pred HHHHHHHHHHcCCCccc
Q 009204 510 ASKYASFLWNTGGEETC 526 (540)
Q Consensus 510 l~NLA~~L~~~GR~Et~ 526 (540)
+..+|.++..+|+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~a 97 (111)
T 2l6j_A 81 QYRLELAQGAVGSVQIP 97 (111)
T ss_dssp HHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHHHhHhhh
Confidence 99999999999988763
No 94
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.28 E-value=1.3e-11 Score=105.41 Aligned_cols=89 Identities=12% Similarity=0.164 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-------H
Q 009204 436 NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS-------S 508 (540)
Q Consensus 436 Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnp-------e 508 (540)
.+.++.++|..++ ..|++++|+++|++||+++|+++.++.++|.++.. .|++++|+++|++|++++|++. .
T Consensus 7 ~A~a~~~lG~~~~-~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 7 AAIAEKDLGNAAY-KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFE-EKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHH-hhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 4567889999999 59999999999999999999999999999998765 7999999999999999998763 5
Q ss_pred HHHHHHHHHHHcCCCccc
Q 009204 509 YASKYASFLWNTGGEETC 526 (540)
Q Consensus 509 al~NLA~~L~~~GR~Et~ 526 (540)
++.++|.++..+|++++|
T Consensus 85 ~~~~lg~~~~~~~~~~~A 102 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLA 102 (127)
T ss_dssp HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHH
Confidence 788999999999998753
No 95
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.26 E-value=1.4e-11 Score=107.63 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=88.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH-HHHhcCCH--HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQF-LHLVTKDY--DRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~-L~~~~GD~--deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEA 492 (540)
.|++++|..+|+++++.+|+++.++.++|.+ +. ..|++ ++|+.+|+++++++|+++.++.++|.++.. .|++++|
T Consensus 57 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~-~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~-~g~~~~A 134 (177)
T 2e2e_A 57 QNDYSNSLLAYRQALQLRGENAELYAALATVLYY-QASQHMTAQTRAMIDKALALDSNEITALMLLASDAFM-QANYAQA 134 (177)
T ss_dssp TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH-HTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-hcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cccHHHH
Confidence 4899999999999999999999999999998 55 58998 999999999999999999999999998764 7999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHH
Q 009204 493 EETYQQAMAAEPNSSSYASKYAS 515 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~ 515 (540)
+.+|+++++++|+++....-+..
T Consensus 135 ~~~~~~al~~~p~~~~~~~~~~~ 157 (177)
T 2e2e_A 135 IELWQKVMDLNSPRINRTQLVES 157 (177)
T ss_dssp HHHHHHHHHTCCTTSCHHHHHHH
T ss_pred HHHHHHHHhhCCCCccHHHHHHH
Confidence 99999999999998765544433
No 96
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.26 E-value=1.5e-11 Score=118.30 Aligned_cols=104 Identities=13% Similarity=0.220 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHH
Q 009204 420 FRTDLLYQMGVA-EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE-ALSQYADFLWLVRKDLWAAEETYQ 497 (540)
Q Consensus 420 eeAe~lYqkALa-lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAe-Al~NLA~~L~~~rGD~EEAee~fe 497 (540)
++|...|++|++ ++|++..+|.+||.++. ..|++++|.+.|++||+++|+++. +|.++|.++.. .|++++|+..|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHH-HHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHH-hcCHHHHHHHHH
Confidence 566666666666 46666666666666555 366666666666666666666654 56666655433 455666666666
Q ss_pred HHHHhCCCCHHHHHHHHHHHHH-cCCCcc
Q 009204 498 QAMAAEPNSSSYASKYASFLWN-TGGEET 525 (540)
Q Consensus 498 KALeLDPdnpeal~NLA~~L~~-~GR~Et 525 (540)
+|++.+|.+..++..++.+... .|++++
T Consensus 159 ~a~~~~p~~~~~~~~~a~~~~~~~~~~~~ 187 (308)
T 2ond_A 159 KAREDARTRHHVYVTAALMEYYCSKDKSV 187 (308)
T ss_dssp HHHTSTTCCTHHHHHHHHHHHHTSCCHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHcCCHHH
Confidence 6666666655555544444322 455443
No 97
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.26 E-value=3.5e-11 Score=120.26 Aligned_cols=109 Identities=20% Similarity=0.276 Sum_probs=102.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+.
T Consensus 288 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~-~~g~~~~A~~ 365 (537)
T 3fp2_A 288 DKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLY-KQGKFTESEA 365 (537)
T ss_dssp CSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHH-HTTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHH
Confidence 4589999999999999999999999999999988 4999999999999999999999999999999876 4799999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|+++++.+|+++.++.++|.++...|++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 396 (537)
T 3fp2_A 366 FFNETKLKFPTLPEVPTFFAEILTDRGDFDT 396 (537)
T ss_dssp HHHHHHHHCTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHhCCHHH
Confidence 9999999999999999999999999999874
No 98
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.26 E-value=1.8e-12 Score=128.46 Aligned_cols=107 Identities=12% Similarity=0.074 Sum_probs=100.4
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD---------------AEALSQYADF 481 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd---------------AeAl~NLA~~ 481 (540)
.++++|..+|++++..+|+++.++.++|.+++ ..|++++|+.+|++|++++|++ +.++.++|.+
T Consensus 127 ~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 205 (336)
T 1p5q_A 127 KSFEKAKESWEMNSEEKLEQSTIVKERGTVYF-KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMC 205 (336)
T ss_dssp EEEECCCCGGGCCHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred eecccccchhcCCHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 56778888999999999999999999999999 4999999999999999999999 6999999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+. ..|++++|+.+|++|++++|+++.+++++|.++..+|++++
T Consensus 206 ~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~ 248 (336)
T 1p5q_A 206 HL-KLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFEL 248 (336)
T ss_dssp HH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 76 47999999999999999999999999999999999999875
No 99
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.25 E-value=1.3e-11 Score=111.11 Aligned_cols=146 Identities=20% Similarity=0.187 Sum_probs=116.5
Q ss_pred hHHHHHHHHHHHHHhhchhhhhhccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHc--------CCCCHHHHH
Q 009204 370 KEELDLWNSVLDEALRIQEESEYRILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAE--------EPNNPLLLL 441 (540)
Q Consensus 370 ~ee~~LW~~~L~eap~~q~~~~~eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALal--------DP~Np~all 441 (540)
++++.+++.+++...+... .-++.....+...+... ...|++++|..+|+++++. +|..+.++.
T Consensus 18 ~~A~~~~~~al~~~~~~~~-----~~~~~~~~~~~~l~~~~---~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 18 GSAVPLCKQALEDLEKTSG-----HDHPDVATMLNILALVY---RDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHC-----SSSHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC-----CCCHHHHHHHHHHHHHH---HHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 4778888888877665321 01233333333333332 2348999999999999988 466778999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Q 009204 442 NYAQFLHLVTKDYDRAEECFKRAIQS--------DPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAA--------EPN 505 (540)
Q Consensus 442 NLA~~L~~~~GD~deAEe~feRALeL--------DPndAeAl~NLA~~L~~~rGD~EEAee~feKALeL--------DPd 505 (540)
++|.++. ..|++++|+++|++|+++ +|....++.++|.++. ..|++++|+++|++++++ +|.
T Consensus 90 ~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 167 (283)
T 3edt_B 90 NLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIYATRLGPDDPN 167 (283)
T ss_dssp HHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHH-HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 9999988 599999999999999998 5778889999999776 579999999999999999 788
Q ss_pred CHHHHHHHHHHHHHcCCCcc
Q 009204 506 SSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 506 npeal~NLA~~L~~~GR~Et 525 (540)
...++.++|.++..+|++++
T Consensus 168 ~~~~~~~la~~~~~~g~~~~ 187 (283)
T 3edt_B 168 VAKTKNNLASCYLKQGKYQD 187 (283)
T ss_dssp HHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHH
Confidence 88899999999999999874
No 100
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.25 E-value=2.1e-11 Score=103.49 Aligned_cols=85 Identities=13% Similarity=0.006 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 009204 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLW 518 (540)
Q Consensus 439 allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~ 518 (540)
.++.+|..+.. .|++++|+.+|++|++++|+++.++.++|.++. ..|++++|+.+|++|++++|+++.++.++|.++.
T Consensus 19 ~~~~~g~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 19 NPMEEGLSMLK-LANLAEAALAFEAVCQKEPEREEAWRSLGLTQA-ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp CHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHH-cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 35678888884 999999999999999999999999999999876 4799999999999999999999999999999999
Q ss_pred HcCCCcc
Q 009204 519 NTGGEET 525 (540)
Q Consensus 519 ~~GR~Et 525 (540)
..|++++
T Consensus 97 ~~g~~~~ 103 (121)
T 1hxi_A 97 NEHNANA 103 (121)
T ss_dssp HHHHHHH
T ss_pred HcCCHHH
Confidence 9999875
No 101
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.25 E-value=1.3e-10 Score=113.70 Aligned_cols=109 Identities=17% Similarity=0.080 Sum_probs=88.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH---HHHHHH------------HH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA---EALSQY------------AD 480 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA---eAl~NL------------A~ 480 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|++. .++..+ |.
T Consensus 73 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~ 151 (450)
T 2y4t_A 73 MGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL-KQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQAL 151 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 478888888888888888888888888888877 48888888888888888888888 776655 43
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 481 FLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 481 ~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.+. ..|++++|+.+|+++++.+|+++.++.++|.++...|++++|
T Consensus 152 ~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 196 (450)
T 2y4t_A 152 NAF-GSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRKA 196 (450)
T ss_dssp HHH-HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGGG
T ss_pred HHH-HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHHH
Confidence 344 467888888888888888888888888888888888887754
No 102
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.25 E-value=1e-10 Score=103.74 Aligned_cols=106 Identities=13% Similarity=0.048 Sum_probs=93.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH----------------HHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA----------------EALSQY 478 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA----------------eAl~NL 478 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|++++++.|++. .++.++
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 127 (213)
T 1hh8_A 49 ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY-QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNI 127 (213)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH-HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHH
Confidence 4589999999999999999999999999999988 49999999999999999888877 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 479 ADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 479 A~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
|.++.. .|++++|+++|++|++++|++.......+........
T Consensus 128 ~~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~ 170 (213)
T 1hh8_A 128 AFMYAK-KEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQK 170 (213)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHHHTTC
T ss_pred HHHHHH-ccCHHHHHHHHHHHHHcCcccccchHHHHHHHHHhcc
Confidence 998764 7999999999999999999876666666655554333
No 103
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.25 E-value=7.9e-11 Score=119.92 Aligned_cols=109 Identities=16% Similarity=0.073 Sum_probs=98.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCC-HHHHHHHHHHHHHHcCC
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS------DPPD-AEALSQYADFLWLVRKD 488 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeL------DPnd-AeAl~NLA~~L~~~rGD 488 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|++++++ +|++ ..++.++|.++.. .|+
T Consensus 454 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~-~g~ 531 (597)
T 2xpi_A 454 LGNILLANEYLQSSYALFQYDPLLLNELGVVAF-NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRK-LKM 531 (597)
T ss_dssp HTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHH-TTC
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH-hcC
Confidence 489999999999999999999999999999888 499999999999999998 6765 7899999988764 789
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 489 LWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 489 ~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+++|+++|+++++++|+++.++..+|.++...|++++|
T Consensus 532 ~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A 569 (597)
T 2xpi_A 532 YDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLA 569 (597)
T ss_dssp HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999997743
No 104
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.24 E-value=9.3e-12 Score=123.60 Aligned_cols=105 Identities=15% Similarity=0.107 Sum_probs=79.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCH-----------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNP-----------------LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQ 477 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np-----------------~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~N 477 (540)
..++|++|..+|++|++.+|++. .+++|+|.++. ..|++++|+.+|++||+++|+++.++++
T Consensus 191 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~ 269 (338)
T 2if4_A 191 KEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLI-KLKRYDEAIGHCNIVLTEEEKNPKALFR 269 (338)
T ss_dssp SSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHH-TTTCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 45899999999999999999987 38999999888 5999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009204 478 YADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTG 521 (540)
Q Consensus 478 LA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~G 521 (540)
+|.++. ..|++++|+.+|++|++++|+++.++.+++.+.....
T Consensus 270 lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~ 312 (338)
T 2if4_A 270 RGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEK 312 (338)
T ss_dssp HHHHHH-TTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 999876 5899999999999999999999999999998855443
No 105
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.24 E-value=1.1e-10 Score=119.01 Aligned_cols=110 Identities=10% Similarity=0.025 Sum_probs=103.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|+++++.+|++..++.++|.++. ..|++++|+++|+++++++|++..++..+|.++.. .|++++|++
T Consensus 385 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~ 462 (597)
T 2xpi_A 385 CVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFA-IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQ-LGNILLANE 462 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHH-HTCHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHH-cCCHHHHHH
Confidence 3489999999999999999999999999999988 49999999999999999999999999999998764 789999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++++++|+++.++..+|.++...|++++|
T Consensus 463 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 494 (597)
T 2xpi_A 463 YLQSSYALFQYDPLLLNELGVVAFNKSDMQTA 494 (597)
T ss_dssp HHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999998753
No 106
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.23 E-value=3.8e-11 Score=97.34 Aligned_cols=91 Identities=20% Similarity=0.189 Sum_probs=85.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 009204 433 EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASK 512 (540)
Q Consensus 433 DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~N 512 (540)
.|.++.++.++|..+. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+++|+++++++|+++.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 89 (133)
T 2lni_A 12 NPDLALMVKNKGNECF-QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYT-KLLEFQLALKDCEECIQLEPTFIKGYTR 89 (133)
T ss_dssp SSCHHHHHHHHHHHHH-HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHT-TTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CcccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCCchHHHHH
Confidence 5778899999999988 4999999999999999999999999999999765 5799999999999999999999999999
Q ss_pred HHHHHHHcCCCcc
Q 009204 513 YASFLWNTGGEET 525 (540)
Q Consensus 513 LA~~L~~~GR~Et 525 (540)
+|.++...|++++
T Consensus 90 la~~~~~~~~~~~ 102 (133)
T 2lni_A 90 KAAALEAMKDYTK 102 (133)
T ss_dssp HHHHHHHTTCHHH
T ss_pred HHHHHHHHhhHHH
Confidence 9999999999875
No 107
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.22 E-value=1e-10 Score=113.58 Aligned_cols=94 Identities=14% Similarity=0.036 Sum_probs=86.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHH-HHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLW-AAEE 494 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~E-EAee 494 (540)
.|++++|..+|+++++.+|+++.+++++|.++. ..|++++|+++|++||+++|++++++.++|.++.. .|+.+ +|.+
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~-~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~-~g~~~eaa~~ 256 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHM-AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQH-LGKPPEVTNR 256 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 388999999999999999999999999999888 49999999999999999999999999999988765 56665 4789
Q ss_pred HHHHHHHhCCCCHHHHH
Q 009204 495 TYQQAMAAEPNSSSYAS 511 (540)
Q Consensus 495 ~feKALeLDPdnpeal~ 511 (540)
+++++++++|+++.+..
T Consensus 257 ~~~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 257 YLSQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhCCCChHHHH
Confidence 99999999999998754
No 108
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.22 E-value=9.1e-11 Score=114.86 Aligned_cols=109 Identities=16% Similarity=0.148 Sum_probs=99.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++..+|.++. ..|++++|+++
T Consensus 39 ~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~-~~g~~~~A~~~ 116 (450)
T 2y4t_A 39 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFL-AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL-KQGKLDEAEDD 116 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH-HcCCHHHHHHH
Confidence 489999999999999999999999999999988 4999999999999999999999999999999876 47999999999
Q ss_pred HHHHHHhCCCCH---HHHHHH------------HHHHHHcCCCccc
Q 009204 496 YQQAMAAEPNSS---SYASKY------------ASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPdnp---eal~NL------------A~~L~~~GR~Et~ 526 (540)
|+++++++|+++ .++..+ |..+...|++++|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A 162 (450)
T 2y4t_A 117 FKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAA 162 (450)
T ss_dssp HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 999999999998 776666 6668888987643
No 109
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.21 E-value=5.6e-11 Score=95.15 Aligned_cols=93 Identities=14% Similarity=0.121 Sum_probs=85.6
Q ss_pred HcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009204 431 AEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYA 510 (540)
Q Consensus 431 alDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal 510 (540)
..+|.++.++..+|..+. ..|++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+++|+++++++|+++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~ 83 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQM-KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYS-KLGNYAGAVQDCERAICIDPAYSKAY 83 (131)
T ss_dssp -CHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hcchhhhHHHHHHHHHHH-HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HhhchHHHHHHHHHHHhcCccCHHHH
Confidence 456778889999999988 4999999999999999999999999999999876 47999999999999999999999999
Q ss_pred HHHHHHHHHcCCCcc
Q 009204 511 SKYASFLWNTGGEET 525 (540)
Q Consensus 511 ~NLA~~L~~~GR~Et 525 (540)
..+|.++...|++++
T Consensus 84 ~~~~~~~~~~~~~~~ 98 (131)
T 2vyi_A 84 GRMGLALSSLNKHVE 98 (131)
T ss_dssp HHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhCCHHH
Confidence 999999999999874
No 110
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.21 E-value=2.2e-11 Score=117.23 Aligned_cols=91 Identities=14% Similarity=0.056 Sum_probs=85.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|+.+|++|++.+|+++.++.++|.++. ..|++++|+.+|++|++++|+++.++.++|.++. ..|++++|+.
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~ 93 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFLGQCQL-EMESYDEAIA 93 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHH
Confidence 3489999999999999999999999999999988 5999999999999999999999999999999876 4799999999
Q ss_pred HHHHHHHhCCCCH
Q 009204 495 TYQQAMAAEPNSS 507 (540)
Q Consensus 495 ~feKALeLDPdnp 507 (540)
+|++|++++|+++
T Consensus 94 ~~~~al~l~p~~~ 106 (281)
T 2c2l_A 94 NLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHhCccch
Confidence 9999999999763
No 111
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.20 E-value=1.6e-10 Score=91.20 Aligned_cols=88 Identities=19% Similarity=0.088 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009204 436 NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYAS 515 (540)
Q Consensus 436 Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~ 515 (540)
.+..+..+|..+. ..|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+.+++++++.+|+++.++.++|.
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 80 (118)
T 1elw_A 3 QVNELKEKGNKAL-SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAK-KGDYQKAYEDGCKTVDLKPDWGKGYSRKAA 80 (118)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4678889999888 49999999999999999999999999999998764 789999999999999999999999999999
Q ss_pred HHHHcCCCcc
Q 009204 516 FLWNTGGEET 525 (540)
Q Consensus 516 ~L~~~GR~Et 525 (540)
++...|++++
T Consensus 81 ~~~~~~~~~~ 90 (118)
T 1elw_A 81 ALEFLNRFEE 90 (118)
T ss_dssp HHHHTTCHHH
T ss_pred HHHHHhhHHH
Confidence 9999999864
No 112
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.20 E-value=2.1e-10 Score=91.05 Aligned_cols=92 Identities=25% Similarity=0.364 Sum_probs=82.2
Q ss_pred cCCCC-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009204 432 EEPNN-PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYA 510 (540)
Q Consensus 432 lDP~N-p~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal 510 (540)
.+|.+ ..++.++|..+. ..|++++|+++|+++++.+|++..++.++|.++.. .|++++|+.+|+++++.+|+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~ 80 (125)
T 1na0_A 3 MDPGNSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYK-QGDYDEAIEYYQKALELDPNNAEAW 80 (125)
T ss_dssp ----CHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCccccHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHhCCccHHHH
Confidence 45666 788999999888 49999999999999999999999999999987764 7899999999999999999999999
Q ss_pred HHHHHHHHHcCCCcc
Q 009204 511 SKYASFLWNTGGEET 525 (540)
Q Consensus 511 ~NLA~~L~~~GR~Et 525 (540)
.++|.++...|++++
T Consensus 81 ~~la~~~~~~~~~~~ 95 (125)
T 1na0_A 81 YNLGNAYYKQGDYDE 95 (125)
T ss_dssp HHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhcCHHH
Confidence 999999999999864
No 113
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.20 E-value=6.9e-11 Score=106.48 Aligned_cols=125 Identities=15% Similarity=0.192 Sum_probs=103.4
Q ss_pred HHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc-
Q 009204 397 HETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAE--------EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS- 467 (540)
Q Consensus 397 ~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALal--------DP~Np~allNLA~~L~~~~GD~deAEe~feRALeL- 467 (540)
+.....+...+.+. ...|++++|..+|++++.. +|....++.++|.++. ..|++++|+++|++++++
T Consensus 82 ~~~~~~~~~l~~~~---~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~ 157 (283)
T 3edt_B 82 PAVAATLNNLAVLY---GKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ-NQGKAEEVEYYYRRALEIY 157 (283)
T ss_dssp HHHHHHHHHHHHHH---HTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH---HHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHH
Confidence 34444444433332 2458999999999999998 5777889999999988 599999999999999999
Q ss_pred -------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------------------------------------
Q 009204 468 -------DPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAA-------------------------------------- 502 (540)
Q Consensus 468 -------DPndAeAl~NLA~~L~~~rGD~EEAee~feKALeL-------------------------------------- 502 (540)
+|....++.++|.++.. .|++++|+.+|++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T 3edt_B 158 ATRLGPDDPNVAKTKNNLASCYLK-QGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGE 236 (283)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHH
Confidence 88888999999998765 79999999999999986
Q ss_pred -----------CCCCHHHHHHHHHHHHHcCCCccc
Q 009204 503 -----------EPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 503 -----------DPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.|..+.++.++|.++..+|++++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 271 (283)
T 3edt_B 237 YGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAA 271 (283)
T ss_dssp ------CCCCCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 255667889999999999998764
No 114
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=1.5e-10 Score=95.74 Aligned_cols=93 Identities=16% Similarity=0.072 Sum_probs=86.3
Q ss_pred HcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 009204 431 AEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD---AEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS 507 (540)
Q Consensus 431 alDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd---AeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnp 507 (540)
..+|.+...+..+|..+. ..|++++|+++|+++++++|++ ..++.++|.++. ..|++++|+.+|+++++++|+++
T Consensus 22 ~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~~~~~ 99 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELF-KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHL-KLEDYDKAETEASKAIEKDGGDV 99 (148)
T ss_dssp CTTCCCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHTSCCH
T ss_pred ccchHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHHhhCccCH
Confidence 457889999999999988 5999999999999999999998 899999998776 47999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcc
Q 009204 508 SYASKYASFLWNTGGEET 525 (540)
Q Consensus 508 eal~NLA~~L~~~GR~Et 525 (540)
.+++++|.++...|++++
T Consensus 100 ~~~~~~a~~~~~~~~~~~ 117 (148)
T 2dba_A 100 KALYRRSQALEKLGRLDQ 117 (148)
T ss_dssp HHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHcCCHHH
Confidence 999999999999999874
No 115
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.18 E-value=1.1e-10 Score=107.26 Aligned_cols=109 Identities=9% Similarity=0.013 Sum_probs=94.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH---HHHHHHHHHHH-----------------hcCCHHHHHHHHHHHHHcCCCCHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL---LLLNYAQFLHL-----------------VTKDYDRAEECFKRAIQSDPPDAEAL 475 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~---allNLA~~L~~-----------------~~GD~deAEe~feRALeLDPndAeAl 475 (540)
.|++++|+..|+++++.+|+++. +++.+|.+++. ..|++++|+..|+++++.+|+++.+.
T Consensus 54 ~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 54 NADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 48999999999999999999875 78888887763 15789999999999999999998654
Q ss_pred -----------------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCCcc
Q 009204 476 -----------------SQYADFLWLVRKDLWAAEETYQQAMAAEPNSS---SYASKYASFLWNTGGEET 525 (540)
Q Consensus 476 -----------------~NLA~~L~~~rGD~EEAee~feKALeLDPdnp---eal~NLA~~L~~~GR~Et 525 (540)
..+|.+++ .+|++++|+..|+++++..|+++ .++..+|.++..+|+.++
T Consensus 134 ~a~~~l~~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~ 202 (225)
T 2yhc_A 134 DATKRLVFLKDRLAKYEYSVAEYYT-ERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQ 202 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHH
Confidence 45676665 47899999999999999999987 679999999999999874
No 116
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.17 E-value=7.9e-11 Score=109.26 Aligned_cols=105 Identities=17% Similarity=0.074 Sum_probs=93.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHHcCCCCHHHH--------
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN---PLLLLNYAQFLHLV--------TKDYDRAEECFKRAIQSDPPDAEAL-------- 475 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N---p~allNLA~~L~~~--------~GD~deAEe~feRALeLDPndAeAl-------- 475 (540)
..|++++|...|+++++.+|++ +.+++++|.++. . .|++++|+.+|+++++.+|++..+.
T Consensus 64 ~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~-~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~ 142 (261)
T 3qky_A 64 QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY-KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRE 142 (261)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH-HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH-HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHH
Confidence 3489999999999999998855 578999999877 6 8999999999999999999997766
Q ss_pred ---------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCC---CHHHHHHHHHHHHHcC
Q 009204 476 ---------SQYADFLWLVRKDLWAAEETYQQAMAAEPN---SSSYASKYASFLWNTG 521 (540)
Q Consensus 476 ---------~NLA~~L~~~rGD~EEAee~feKALeLDPd---npeal~NLA~~L~~~G 521 (540)
.++|.++. ..|++++|+.+|+++++..|+ .+.+++.+|.++..+|
T Consensus 143 ~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 143 LRAKLARKQYEAARLYE-RRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 77898776 479999999999999999998 5679999999999873
No 117
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.17 E-value=6.3e-11 Score=113.66 Aligned_cols=108 Identities=13% Similarity=0.121 Sum_probs=94.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhc-CCHHHHHHHHHHHHHcCCCC------HHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN------PLLLLNYAQFLHLVT-KDYDRAEECFKRAIQSDPPD------AEALSQYADF 481 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N------p~allNLA~~L~~~~-GD~deAEe~feRALeLDPnd------AeAl~NLA~~ 481 (540)
..|++++|+.+|++|+++.|.. ..++.++|.++. .. |++++|+++|++|+++.|++ +.++.++|.+
T Consensus 89 ~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~ 167 (292)
T 1qqe_A 89 SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE-NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADL 167 (292)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 4589999999999999998764 468899999888 46 99999999999999998865 5689999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHcCCCc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPNSSS-------YASKYASFLWNTGGEE 524 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPdnpe-------al~NLA~~L~~~GR~E 524 (540)
+.. .|++++|+.+|+++++++|++.. ++.++|.++..+|+++
T Consensus 168 ~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 216 (292)
T 1qqe_A 168 KAL-DGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAV 216 (292)
T ss_dssp HHH-TTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHH-hCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHH
Confidence 764 79999999999999999998754 6789999999999976
No 118
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.17 E-value=1.2e-10 Score=116.37 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=101.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|+++++.+|+ +.++..+|.++. ..|++++|+++|+++++++|+++.++.++|.++. ..|++++|+++
T Consensus 256 ~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~ 332 (537)
T 3fp2_A 256 KNNLLDAQVLLQESINLHPT-PNSYIFLALTLA-DKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYF-ILQDYKNAKED 332 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTC-CSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCC-chHHHHHHHHHH-HhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-hcCCHHHHHHH
Confidence 48999999999999999999 999999999888 5999999999999999999999999999999876 47999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
|+++++++|+++.++.++|.++...|++++|
T Consensus 333 ~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 363 (537)
T 3fp2_A 333 FQKAQSLNPENVYPYIQLACLLYKQGKFTES 363 (537)
T ss_dssp HHHHHHHCTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999998753
No 119
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.17 E-value=8.6e-11 Score=108.04 Aligned_cols=109 Identities=14% Similarity=0.078 Sum_probs=95.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH---HHHHHHHHHHHH----
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP---LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE---ALSQYADFLWLV---- 485 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np---~allNLA~~L~~~~GD~deAEe~feRALeLDPndAe---Al~NLA~~L~~~---- 485 (540)
.|++++|+..|+++++.+|+++ .+++++|.+++ ..|++++|+..|+++++.+|+++. ++..+|.++...
T Consensus 17 ~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~-~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~ 95 (225)
T 2yhc_A 17 DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY-KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA 95 (225)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence 4899999999999999999874 78999999998 599999999999999999999975 788888876542
Q ss_pred -------------cCCHHHHHHHHHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCCcc
Q 009204 486 -------------RKDLWAAEETYQQAMAAEPNSSSYA-----------------SKYASFLWNTGGEET 525 (540)
Q Consensus 486 -------------rGD~EEAee~feKALeLDPdnpeal-----------------~NLA~~L~~~GR~Et 525 (540)
.|++++|+..|+++++.+|+++.++ ..+|.++...|++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~ 165 (225)
T 2yhc_A 96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVA 165 (225)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred hhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 4689999999999999999998654 578889999999864
No 120
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.17 E-value=4.1e-10 Score=89.69 Aligned_cols=89 Identities=28% Similarity=0.362 Sum_probs=83.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|..+|++++..+|+++.++.++|.++. ..|++++|+++|+++++.+|++..++..+|.++. ..|++++|+.+
T Consensus 48 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~ 125 (136)
T 2fo7_A 48 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY-KQGDYDEAIEY 125 (136)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HHccHHHHHHH
Confidence 389999999999999999999999999999988 5999999999999999999999999999999776 57999999999
Q ss_pred HHHHHHhCCCC
Q 009204 496 YQQAMAAEPNS 506 (540)
Q Consensus 496 feKALeLDPdn 506 (540)
|++++..+|++
T Consensus 126 ~~~~~~~~~~~ 136 (136)
T 2fo7_A 126 YQKALELDPRS 136 (136)
T ss_dssp HHHHHHHSTTC
T ss_pred HHHHHccCCCC
Confidence 99999999974
No 121
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.15 E-value=2.1e-11 Score=109.17 Aligned_cols=108 Identities=12% Similarity=-0.024 Sum_probs=94.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH----------------HHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA----------------EALSQYA 479 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA----------------eAl~NLA 479 (540)
.+++++|...++......+..+..+.++|..++ ..|++++|+.+|++|+++.|+++ .++.++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 95 (198)
T 2fbn_A 17 LYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFF-KKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLA 95 (198)
T ss_dssp -----CCCSGGGCCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccccCchhhCCHHHHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHH
Confidence 477888888888877777888889999999988 49999999999999999999998 8999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 480 DFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 480 ~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
.++. ..|++++|+.++++|++++|+++.+++++|.++..+|++++
T Consensus 96 ~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~ 140 (198)
T 2fbn_A 96 TCYN-KNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEE 140 (198)
T ss_dssp HHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHH-HhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHH
Confidence 9876 47999999999999999999999999999999999999874
No 122
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=6.3e-10 Score=110.21 Aligned_cols=104 Identities=10% Similarity=-0.043 Sum_probs=82.0
Q ss_pred CCCHHHHHHHHHHHHHc---------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--------CCCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAE---------EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS--------DPPDAEALSQY 478 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALal---------DP~Np~allNLA~~L~~~~GD~deAEe~feRALeL--------DPndAeAl~NL 478 (540)
.|++++|+.+|++|+++ +|....++.|+|.+++ .+|++++|+.+|++++++ ++..+.++.+.
T Consensus 64 ~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~-~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~ 142 (472)
T 4g1t_A 64 KGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYY-HMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEE 142 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHH
Confidence 48888888888888876 6777788888888888 488888888888888886 44667888888
Q ss_pred HHHHHHH-cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 009204 479 ADFLWLV-RKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNT 520 (540)
Q Consensus 479 A~~L~~~-rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~ 520 (540)
|..+... ++++++|+++|++|++++|++++++.+++.++...
T Consensus 143 g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l 185 (472)
T 4g1t_A 143 GWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRL 185 (472)
T ss_dssp HHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 7655432 35688888888888888888888888888775543
No 123
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.15 E-value=9.7e-12 Score=128.58 Aligned_cols=107 Identities=9% Similarity=0.040 Sum_probs=100.3
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD---------------AEALSQYADF 481 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd---------------AeAl~NLA~~ 481 (540)
+++++|...|++++..+|+++.++.++|..++ ..|++++|+.+|++||+++|++ ..+|.++|.+
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~-~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~ 326 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYF-KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMC 326 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999999 4999999999999999999999 7999999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++. .|++++|+.+|++|++++|+++.+++++|.+|..+|++++
T Consensus 327 ~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~ 369 (457)
T 1kt0_A 327 YLK-LREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFES 369 (457)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHH-hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHH
Confidence 764 7999999999999999999999999999999999999874
No 124
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.14 E-value=2.3e-10 Score=93.52 Aligned_cols=89 Identities=18% Similarity=0.200 Sum_probs=75.8
Q ss_pred cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CCHHH
Q 009204 432 EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEP--NSSSY 509 (540)
Q Consensus 432 lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDP--dnpea 509 (540)
.+|+++.+++++|.++. ..|++++|+++|++|++++|+++.++.++|.++. ..|++++|+++|++|++++| .+...
T Consensus 2 ~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~g~~~~A~~~~~~al~l~~~~~~~~~ 79 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHL-KHDNASRALALFEELVETDPDYVGTYYHLGKLYE-RLDRTDDAIDTYAQGIEVAREEGTQKD 79 (100)
T ss_dssp ---CCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred CCccCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhhhcCCchhH
Confidence 48999999999999998 4999999999999999999999999999999876 57999999999999999987 45666
Q ss_pred HHHHHHHHHHcCC
Q 009204 510 ASKYASFLWNTGG 522 (540)
Q Consensus 510 l~NLA~~L~~~GR 522 (540)
...+..++...+.
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 7777777665443
No 125
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.3e-10 Score=114.72 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=100.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHH---
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE------ALSQYADFLWLV--- 485 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAe------Al~NLA~~L~~~--- 485 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++. ++.++|.++. .
T Consensus 350 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 427 (514)
T 2gw1_A 350 RENKFDDCETLFSEAKRKFPEAPEVPNFFAEILT-DKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLT-RNPT 427 (514)
T ss_dssp TTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHH-TSCC
T ss_pred HcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHh-hhhh
Confidence 4589999999999999999999999999999888 499999999999999999999865 8999998765 5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 486 RKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 486 rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.|++++|+++|+++++++|+++.++..+|.++...|++++|
T Consensus 428 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 468 (514)
T 2gw1_A 428 VENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEA 468 (514)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHH
Confidence 68999999999999999999999999999999999998753
No 126
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.13 E-value=1.6e-10 Score=92.78 Aligned_cols=90 Identities=13% Similarity=0.171 Sum_probs=82.1
Q ss_pred CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------
Q 009204 434 PNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNS------- 506 (540)
Q Consensus 434 P~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdn------- 506 (540)
|..+..+.++|..+. ..|++++|+.+|+++++.+|+++.++.++|.++.. .|++++|+.+|++++.++|++
T Consensus 1 ~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~-~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (131)
T 1elr_A 1 GKQALKEKELGNDAY-KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFE-KGDYNKCRELCEKAIEVGRENREDYRQI 78 (131)
T ss_dssp CHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHSTTCHHHH
T ss_pred ChHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH-hccHHHHHHHHHHHHhhccccchhHHHH
Confidence 345678899999888 49999999999999999999999999999998764 789999999999999999987
Q ss_pred HHHHHHHHHHHHHcCCCcc
Q 009204 507 SSYASKYASFLWNTGGEET 525 (540)
Q Consensus 507 peal~NLA~~L~~~GR~Et 525 (540)
+.++.++|.++...|++++
T Consensus 79 ~~~~~~la~~~~~~~~~~~ 97 (131)
T 1elr_A 79 AKAYARIGNSYFKEEKYKD 97 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhccHHH
Confidence 9999999999999999874
No 127
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.13 E-value=8.5e-11 Score=112.74 Aligned_cols=109 Identities=12% Similarity=-0.031 Sum_probs=94.2
Q ss_pred CCCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPN------NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~------Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.|++++|..+|++|+++.+. .+.++.++|.++. ..|++++|+.+|++|+++.|.. +.++.++|.++.
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~ 128 (292)
T 1qqe_A 50 RKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFK-SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE 128 (292)
T ss_dssp TTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 48999999999999998532 2578999999888 5999999999999999998754 568999998765
Q ss_pred HHc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009204 484 LVR-KDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 484 ~~r-GD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~Et~ 526 (540)
.. |++++|+++|++|+++.|.+ ..++.++|.++..+|++++|
T Consensus 129 -~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 177 (292)
T 1qqe_A 129 -NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEA 177 (292)
T ss_dssp -HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred -HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHH
Confidence 44 99999999999999998865 56799999999999998753
No 128
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=114.98 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHL---VTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~---~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEA 492 (540)
.+++++|...|++|++++|+++.++.++|..+.. ..+++++|+++|++|+.++|+++.++.++|.++. ..|++++|
T Consensus 188 ~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~-~~~~~~~A 266 (472)
T 4g1t_A 188 WPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYR-RKDEPDKA 266 (472)
T ss_dssp SCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHH-HTTCHHHH
T ss_pred chHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHH-HcCchHHH
Confidence 3455556666666666666666666555544321 1345556666666666666666666666665543 35666666
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Q 009204 493 EETYQQAMAAEPNSSSYASKYASFLWNTG 521 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~NLA~~L~~~G 521 (540)
+++|++|++.+|+++.++.++|.++...+
T Consensus 267 ~~~~~~al~~~p~~~~~~~~lg~~y~~~~ 295 (472)
T 4g1t_A 267 IELLKKALEYIPNNAYLHCQIGCCYRAKV 295 (472)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHH
Confidence 66666666666666666666666655443
No 129
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.12 E-value=2.1e-10 Score=99.55 Aligned_cols=87 Identities=20% Similarity=0.164 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------------------CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 009204 437 PLLLLNYAQFLHLVTKDYDRAEECFKRAIQS------------------DPPDAEALSQYADFLWLVRKDLWAAEETYQQ 498 (540)
Q Consensus 437 p~allNLA~~L~~~~GD~deAEe~feRALeL------------------DPndAeAl~NLA~~L~~~rGD~EEAee~feK 498 (540)
+..+.+.|..++ ..|++++|+.+|++||++ +|.++.++.++|.++.. .|++++|+.++++
T Consensus 11 a~~~~~~G~~~~-~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 11 VEALRQKGNELF-VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLN-IGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cCcHHHHHHHHHH
Confidence 467888999999 599999999999999999 77888999999998765 7899999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 499 AMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 499 ALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
|++++|+++.+++++|.++..+|++++
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~ 115 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDE 115 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHH
Confidence 999999999999999999999999874
No 130
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.12 E-value=5.9e-10 Score=93.92 Aligned_cols=88 Identities=16% Similarity=0.037 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009204 436 NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYAS 515 (540)
Q Consensus 436 Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~ 515 (540)
.+..+.++|..++ ..|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.
T Consensus 12 ~~~~~~~~a~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~ 89 (166)
T 1a17_A 12 RAEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYL-RTECYGYALGDATRAIELDKKYIKGYYRRAA 89 (166)
T ss_dssp HHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3567888999888 4999999999999999999999999999999876 4799999999999999999999999999999
Q ss_pred HHHHcCCCcc
Q 009204 516 FLWNTGGEET 525 (540)
Q Consensus 516 ~L~~~GR~Et 525 (540)
++..+|++++
T Consensus 90 ~~~~~~~~~~ 99 (166)
T 1a17_A 90 SNMALGKFRA 99 (166)
T ss_dssp HHHHTTCHHH
T ss_pred HHHHhccHHH
Confidence 9999999874
No 131
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.11 E-value=3.1e-10 Score=109.23 Aligned_cols=90 Identities=17% Similarity=0.117 Sum_probs=85.0
Q ss_pred CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 009204 434 PNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKY 513 (540)
Q Consensus 434 P~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NL 513 (540)
|.++..+.++|..++ ..|++++|+.+|++|++++|+++.++.++|.++. ..|++++|+.+|++|++++|+++.+++++
T Consensus 1 p~~a~~~~~~g~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~l 78 (281)
T 2c2l_A 1 SPSAQELKEQGNRLF-VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYL-KMQQPEQALADCRRALELDGQSVKAHFFL 78 (281)
T ss_dssp CCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred ChhHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 678899999999999 4999999999999999999999999999999876 47999999999999999999999999999
Q ss_pred HHHHHHcCCCcc
Q 009204 514 ASFLWNTGGEET 525 (540)
Q Consensus 514 A~~L~~~GR~Et 525 (540)
|.++..+|++++
T Consensus 79 g~~~~~~g~~~~ 90 (281)
T 2c2l_A 79 GQCQLEMESYDE 90 (281)
T ss_dssp HHHHHHTTCHHH
T ss_pred HHHHHHcCCHHH
Confidence 999999999874
No 132
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.11 E-value=9.3e-11 Score=115.85 Aligned_cols=109 Identities=17% Similarity=0.226 Sum_probs=95.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..|++++|..+|++++..+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++. ..|++++|+.
T Consensus 282 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~ 359 (514)
T 2gw1_A 282 DRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNF-ILQNYDQAGKDFDKAKELDPENIFPYIQLACLAY-RENKFDDCET 359 (514)
T ss_dssp TSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHH-HTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTT-TTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHH-HcCCHHHHHH
Confidence 3478888999999999999999999999998888 4899999999999999999999999988888765 4788999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|+++++.+|+++.++.++|.++...|++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 390 (514)
T 2gw1_A 360 LFSEAKRKFPEAPEVPNFFAEILTDKNDFDK 390 (514)
T ss_dssp HHHHHHHHSTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHCCCHHH
Confidence 9999999999999999999999999998764
No 133
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.10 E-value=2.8e-10 Score=105.83 Aligned_cols=87 Identities=21% Similarity=0.131 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC-------CHH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--
Q 009204 437 PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPP-------DAE-----ALSQYADFLWLVRKDLWAAEETYQQAMAA-- 502 (540)
Q Consensus 437 p~allNLA~~L~~~~GD~deAEe~feRALeLDPn-------dAe-----Al~NLA~~L~~~rGD~EEAee~feKALeL-- 502 (540)
...+.+.|..++ ..|++++|+.+|++||+++|+ +.. +|.|+|.++.. .|++++|+.+|++||++
T Consensus 11 a~~~~~~G~~l~-~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~-Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQL-VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAG-LRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHhhh
Confidence 466788999999 599999999999999999999 444 99999998765 79999999999999999
Q ss_pred -----CCCCHHHH----HHHHHHHHHcCCCcc
Q 009204 503 -----EPNSSSYA----SKYASFLWNTGGEET 525 (540)
Q Consensus 503 -----DPdnpeal----~NLA~~L~~~GR~Et 525 (540)
+|+++.+| ++.|.+|..+|++++
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eE 120 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAE 120 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHH
Confidence 99999999 999999999999985
No 134
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.09 E-value=4.2e-10 Score=92.12 Aligned_cols=86 Identities=16% Similarity=0.167 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHH
Q 009204 438 LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA---EALSQYADFLWLVRKDLWAAEETYQQAMAAEPNS---SSYAS 511 (540)
Q Consensus 438 ~allNLA~~L~~~~GD~deAEe~feRALeLDPndA---eAl~NLA~~L~~~rGD~EEAee~feKALeLDPdn---peal~ 511 (540)
.+++++|..+. ..|++++|+.+|+++++.+|+++ .++.++|.+++. .|++++|+.+|+++++.+|++ +.+++
T Consensus 3 ~~~~~~a~~~~-~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 3 RTAYNVAFDAL-KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYA-TRNFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp CCHHHHHHHHH-HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHHHHHH-HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-hccHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 35678898888 49999999999999999999999 899999998764 799999999999999999999 89999
Q ss_pred HHHHHHHHcCCCcc
Q 009204 512 KYASFLWNTGGEET 525 (540)
Q Consensus 512 NLA~~L~~~GR~Et 525 (540)
++|.++..+|++++
T Consensus 81 ~la~~~~~~g~~~~ 94 (129)
T 2xev_A 81 KLGLSQYGEGKNTE 94 (129)
T ss_dssp HHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCHHH
Confidence 99999999999874
No 135
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.06 E-value=1.5e-09 Score=103.46 Aligned_cols=110 Identities=10% Similarity=0.013 Sum_probs=94.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhcCCHHHHHHHHHHHH---HcCCCCH----HHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN------PLLLLNYAQFLHLVTKDYDRAEECFKRAI---QSDPPDA----EALSQYADF 481 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N------p~allNLA~~L~~~~GD~deAEe~feRAL---eLDPndA----eAl~NLA~~ 481 (540)
..|++++|..+|++|+...+.. ..++.++|.++. ..|++++|+.+|++|+ +..|++. .++.++|.+
T Consensus 127 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~ 205 (293)
T 2qfc_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKA 205 (293)
T ss_dssp TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHH
Confidence 4579999999999999876554 568999999988 4999999999999999 5567654 689999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCCccc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPN------SSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPd------npeal~NLA~~L~~~GR~Et~ 526 (540)
+. ..|++++|+++|++|+++.++ -+.++.++|.++..+|++++|
T Consensus 206 y~-~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 206 LY-LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HH-HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HH-HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 76 479999999999999998653 277899999999999999865
No 136
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.05 E-value=7.2e-10 Score=114.24 Aligned_cols=109 Identities=17% Similarity=0.264 Sum_probs=98.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNP-LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np-~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAe 493 (540)
..|++++|...|+++++.+|.++ .+|.+++.++. ..|++++|.++|++|++..|.+...+...+.+.+...|++++|.
T Consensus 333 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~ 411 (530)
T 2ooe_A 333 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR-RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAF 411 (530)
T ss_dssp HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHH
T ss_pred hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHH-HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHH
Confidence 35899999999999999999996 69999999888 49999999999999999999988888777766555579999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 494 ETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 494 e~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
.+|++|++.+|+++.+|.+|+.++...|+.+
T Consensus 412 ~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~ 442 (530)
T 2ooe_A 412 KIFELGLKKYGDIPEYVLAYIDYLSHLNEDN 442 (530)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHhCCCHh
Confidence 9999999999999999999999999999875
No 137
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.04 E-value=1.9e-10 Score=91.41 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=45.1
Q ss_pred CCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPL-LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~-allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
|++++|..+|+++++.+|+++. ++.++|.++. ..|++++|+++|+++++++|+++.++.+ +.+.+|+.+
T Consensus 14 ~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~---------~~~~~a~~~ 83 (99)
T 2kc7_A 14 GDIENALQALEEFLQTEPVGKDEAYYLMGNAYR-KLGDWQKALNNYQSAIELNPDSPALQAR---------KMVMDILNF 83 (99)
T ss_dssp TCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCTTSTHHHHH---------HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhcCCCcHHHHHH---------HHHHHHHHH
Confidence 5556666666666666666655 5666665555 3566666666666666666665555422 224555555
Q ss_pred HHHHHHhCCCC
Q 009204 496 YQQAMAAEPNS 506 (540)
Q Consensus 496 feKALeLDPdn 506 (540)
|++++..+|++
T Consensus 84 ~~~~~~~~p~~ 94 (99)
T 2kc7_A 84 YNKDMYNQLEH 94 (99)
T ss_dssp HCCTTHHHHCC
T ss_pred HHHHhccCccc
Confidence 55555555544
No 138
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.03 E-value=3.4e-09 Score=98.33 Aligned_cols=104 Identities=10% Similarity=0.036 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---cCC
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLV----TKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV---RKD 488 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~----~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~---rGD 488 (540)
.+++++|..+|++|++.+ ++.++.++|.++. . .+++++|+++|++|++. +++.++.++|.++... .++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYY-SGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHh-CCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccC
Confidence 578888888888888875 7888888888777 6 88888888888888887 4888888888866431 678
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCccc
Q 009204 489 LWAAEETYQQAMAAEPNSSSYASKYASFLWN----TGGEETC 526 (540)
Q Consensus 489 ~EEAee~feKALeLDPdnpeal~NLA~~L~~----~GR~Et~ 526 (540)
+++|+++|++|++++ ++.++.++|.++.. .++++++
T Consensus 130 ~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A 169 (273)
T 1ouv_A 130 FKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKA 169 (273)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred HHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 888888888888876 67788888888887 7776654
No 139
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.03 E-value=3.4e-10 Score=103.98 Aligned_cols=110 Identities=18% Similarity=0.263 Sum_probs=97.4
Q ss_pred CCCCHHHHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--------CCCCHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEE--------PNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS--------DPPDAEALSQY 478 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalD--------P~Np~allNLA~~L~~~~GD~deAEe~feRALeL--------DPndAeAl~NL 478 (540)
..|++++|..+|+++++.. |....++.++|.++. ..|++++|+++|++++++ +|..+.++.++
T Consensus 123 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 201 (311)
T 3nf1_A 123 KRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNL 201 (311)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4589999999999999984 666778999999988 599999999999999999 78888899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-------------------------------------------------CCCCHHH
Q 009204 479 ADFLWLVRKDLWAAEETYQQAMAA-------------------------------------------------EPNSSSY 509 (540)
Q Consensus 479 A~~L~~~rGD~EEAee~feKALeL-------------------------------------------------DPdnpea 509 (540)
|.++.. .|++++|+++|++++++ +|..+.+
T Consensus 202 a~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 280 (311)
T 3nf1_A 202 ASCYLK-QGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTT 280 (311)
T ss_dssp HHHHHH-HTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHH
T ss_pred HHHHHH-cCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHH
Confidence 998764 78999999999999984 4677788
Q ss_pred HHHHHHHHHHcCCCccc
Q 009204 510 ASKYASFLWNTGGEETC 526 (540)
Q Consensus 510 l~NLA~~L~~~GR~Et~ 526 (540)
+.++|.++..+|++++|
T Consensus 281 ~~~la~~~~~~g~~~~A 297 (311)
T 3nf1_A 281 LKNLGALYRRQGKFEAA 297 (311)
T ss_dssp HHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHCCCHHHH
Confidence 99999999999998764
No 140
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.02 E-value=3.1e-10 Score=104.25 Aligned_cols=110 Identities=25% Similarity=0.239 Sum_probs=97.4
Q ss_pred CCCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC--------CCCHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAE--------EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSD--------PPDAEALSQY 478 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal--------DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLD--------PndAeAl~NL 478 (540)
..|++++|..+|++++.. +|....++.++|.++. ..|++++|+++|++++++. |....++.++
T Consensus 81 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 159 (311)
T 3nf1_A 81 DQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYG-KRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNL 159 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH-HcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 348999999999999988 4666789999999988 5999999999999999984 6667789999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCccc
Q 009204 479 ADFLWLVRKDLWAAEETYQQAMAA--------EPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 479 A~~L~~~rGD~EEAee~feKALeL--------DPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
|.++. ..|++++|+++|++++++ +|....++.++|.++..+|++++|
T Consensus 160 a~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 214 (311)
T 3nf1_A 160 ALLCQ-NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 214 (311)
T ss_dssp HHHHH-TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHH-HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 98775 579999999999999998 788888999999999999998753
No 141
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.01 E-value=5.2e-10 Score=91.91 Aligned_cols=109 Identities=8% Similarity=0.040 Sum_probs=91.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP------LLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np------~allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.|++++|..+|+++++..+... .++.++|.++. ..|++++|+++|++|+++.+.. +.++.++|.++.
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 100 (164)
T 3ro3_A 22 LGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 100 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 4899999999999999865432 47889999888 4999999999999999986554 668889998776
Q ss_pred HHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCCccc
Q 009204 484 LVRKDLWAAEETYQQAMAAEPN------SSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 484 ~~rGD~EEAee~feKALeLDPd------npeal~NLA~~L~~~GR~Et~ 526 (540)
..|++++|++++++++++.+. .+.++.++|.++..+|++++|
T Consensus 101 -~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 148 (164)
T 3ro3_A 101 -LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 148 (164)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred -HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHH
Confidence 479999999999999987432 246789999999999998754
No 142
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.00 E-value=8.1e-10 Score=105.25 Aligned_cols=109 Identities=11% Similarity=0.033 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc-------CCCCHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQS-------DPPDAEALSQYADF 481 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N------p~allNLA~~L~~~~GD~deAEe~feRALeL-------DPndAeAl~NLA~~ 481 (540)
..+++++|..+|++|+...+.. ..++.++|.++. ..|++++|+.+|++|+++ .+..+.++.++|.+
T Consensus 127 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~ 205 (293)
T 3u3w_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA-ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKA 205 (293)
T ss_dssp TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 3479999999999999975443 337899999988 499999999999999952 23345689999998
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCC-cc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGE-ET 525 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~-Et 525 (540)
+.. .|++++|++++++|+++.+.. +.++.++|.++..+|+. ++
T Consensus 206 y~~-~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~ 255 (293)
T 3u3w_A 206 LYL-DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHH-HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 765 799999999999999987654 78999999999999964 53
No 143
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.99 E-value=1.6e-10 Score=95.83 Aligned_cols=75 Identities=21% Similarity=0.172 Sum_probs=66.8
Q ss_pred cCCHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 451 TKDYDRAEECFKRAIQS---DPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 451 ~GD~deAEe~feRALeL---DPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.|++++|+.+|++|+++ +|+++.++.++|.++.. .|++++|+++|++|++++|+++.++.++|.++..+|++++|
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRT-LGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 78999999999999999 69999999999998764 79999999999999999999999999999999999998753
No 144
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.99 E-value=5.6e-10 Score=108.23 Aligned_cols=105 Identities=10% Similarity=0.082 Sum_probs=96.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP----LLLLNYAQFLHLVTKDYDRAEECFKRAIQS------DPPDAEALSQYADFLWLV 485 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np----~allNLA~~L~~~~GD~deAEe~feRALeL------DPndAeAl~NLA~~L~~~ 485 (540)
.|++++|..+|+++++.+|+++ .++.++|.++. ..|++++|+++|++|+++ +|..+.++.++|.++. .
T Consensus 61 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~ 138 (411)
T 4a1s_A 61 AGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYF-YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLK-V 138 (411)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-H
T ss_pred hCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHH-H
Confidence 4899999999999999999998 57889999988 499999999999999998 6888899999999776 5
Q ss_pred cCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCC
Q 009204 486 RKDLWAAEETYQQAMAA------EPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 486 rGD~EEAee~feKALeL------DPdnpeal~NLA~~L~~~GR 522 (540)
.|++++|+++|++|+++ .|....++.++|.++..+|+
T Consensus 139 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 139 MGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 79999999999999999 67778899999999999999
No 145
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.96 E-value=3.5e-10 Score=90.00 Aligned_cols=82 Identities=12% Similarity=0.044 Sum_probs=71.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHHcCC
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLWLVRKD 488 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~~~rGD 488 (540)
..|++++|..+|+++++.+|+++.++.++|.++. ..|++++|+++|++|++++|++ ..++.++|.++.. .|+
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 93 (111)
T 2l6j_A 16 KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALI-KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGA-VGS 93 (111)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHH-HHC
T ss_pred HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHH-HHh
Confidence 4589999999999999999999999999999988 5999999999999999999999 8888888887654 566
Q ss_pred HHHHHHHHHH
Q 009204 489 LWAAEETYQQ 498 (540)
Q Consensus 489 ~EEAee~feK 498 (540)
+++|++.+++
T Consensus 94 ~~~a~~~~~~ 103 (111)
T 2l6j_A 94 VQIPVVEVDE 103 (111)
T ss_dssp CCCCSSSSSS
T ss_pred HhhhHhHHHH
Confidence 6666655543
No 146
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.96 E-value=7.8e-10 Score=96.49 Aligned_cols=109 Identities=12% Similarity=0.114 Sum_probs=90.9
Q ss_pred CCCHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc---CCCC----HHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVA------EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS---DPPD----AEALSQYADFL 482 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALa------lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeL---DPnd----AeAl~NLA~~L 482 (540)
.|++++|..+|+++++ ..|....++.++|.++. ..|++++|+++|++|+++ .+++ +.++.++|.++
T Consensus 39 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 117 (203)
T 3gw4_A 39 MDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVA 117 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHH
Confidence 4899999999999999 55667788999999988 499999999999999998 4433 56788999877
Q ss_pred HHHcCCHHHHHHHHHHHHHhCC--CCH----HHHHHHHHHHHHcCCCccc
Q 009204 483 WLVRKDLWAAEETYQQAMAAEP--NSS----SYASKYASFLWNTGGEETC 526 (540)
Q Consensus 483 ~~~rGD~EEAee~feKALeLDP--dnp----eal~NLA~~L~~~GR~Et~ 526 (540)
.. .|++++|++++++++++.+ +++ .++.++|.++..+|+++++
T Consensus 118 ~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 166 (203)
T 3gw4_A 118 LH-FGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEA 166 (203)
T ss_dssp HH-HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HH-hCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHH
Confidence 64 7999999999999998643 233 2468999999999998754
No 147
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.96 E-value=3.5e-09 Score=101.94 Aligned_cols=92 Identities=24% Similarity=0.191 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHH-------------------
Q 009204 433 EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAE------------------- 493 (540)
Q Consensus 433 DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAe------------------- 493 (540)
-|++...+..+|..+.. .|++++|+.+|+++++++|+++.++.++|.++.. .|++++|+
T Consensus 113 lp~~~~~~~~~a~~~~~-~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~-~g~~~~A~~~l~~~~~~~p~~~~~~~~ 190 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQ-ESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIA-LNRSEDAEAVLXTIPLQDQDTRYQGLV 190 (287)
T ss_dssp SCCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH-TTCHHHHHHHHTTSCGGGCSHHHHHHH
T ss_pred cCCchhhHHHHHHHHHh-CCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHH-CCCHHHHHHHHHhCchhhcchHHHHHH
Confidence 49999999999999884 9999999999999999999999999999997754 67777765
Q ss_pred ---------------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 494 ---------------ETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 494 ---------------e~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+.|+++++++|+++.+++++|.+|...|++++|
T Consensus 191 ~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A 238 (287)
T 3qou_A 191 AQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEA 238 (287)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHH
Confidence 456666888999999999999999999998753
No 148
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.95 E-value=1.1e-09 Score=107.16 Aligned_cols=108 Identities=11% Similarity=0.026 Sum_probs=79.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH------HHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNN-------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA------EALSQYADFL 482 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~N-------p~allNLA~~L~~~~GD~deAEe~feRALeLDPndA------eAl~NLA~~L 482 (540)
.|++++|..+|++|+++.+.. ..++.++|.++. ..|++++|+++|++|+++.+... .++.++|.++
T Consensus 156 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 234 (383)
T 3ulq_A 156 MKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL-DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCK 234 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 477888888888888774332 347777887777 48888888888888887754332 4777788766
Q ss_pred HHHcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHcCCCcc
Q 009204 483 WLVRKDLWAAEETYQQAMA-----AE-PNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 483 ~~~rGD~EEAee~feKALe-----LD-Pdnpeal~NLA~~L~~~GR~Et 525 (540)
. ..|++++|+++|++|++ .+ |..+.++.++|.++..+|++++
T Consensus 235 ~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 282 (383)
T 3ulq_A 235 N-SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDK 282 (383)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHH
T ss_pred H-HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHH
Confidence 5 46788888888888888 46 7777778888888888888764
No 149
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.95 E-value=1.1e-08 Score=94.87 Aligned_cols=105 Identities=16% Similarity=0.141 Sum_probs=92.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---cCC
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLV----TKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV---RKD 488 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~----~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~---rGD 488 (540)
.+++++|..+|++|++.+ ++.++.++|.++. . .+++++|+++|++|++.+ ++.++.++|.++... .++
T Consensus 91 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~-~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~ 165 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLK--YAEGCASLGGIYH-DGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKD 165 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCC
T ss_pred ccCHHHHHHHHHHHHHcC--CccHHHHHHHHHH-cCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCC
Confidence 689999999999999974 8999999999887 6 899999999999999986 788999999876531 689
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCcccc
Q 009204 489 LWAAEETYQQAMAAEPNSSSYASKYASFLWN----TGGEETCF 527 (540)
Q Consensus 489 ~EEAee~feKALeLDPdnpeal~NLA~~L~~----~GR~Et~~ 527 (540)
+++|+++|++|++. +++.++.++|.++.. .+++++|.
T Consensus 166 ~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A~ 206 (273)
T 1ouv_A 166 LKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEAL 206 (273)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 99999999999988 468899999999999 88877643
No 150
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.94 E-value=8.1e-09 Score=81.89 Aligned_cols=84 Identities=18% Similarity=0.156 Sum_probs=72.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH--HHHHHHH
Q 009204 441 LNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE-ALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYA--SKYASFL 517 (540)
Q Consensus 441 lNLA~~L~~~~GD~deAEe~feRALeLDPndAe-Al~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal--~NLA~~L 517 (540)
++.|..+. ..|++++|+++|+++++++|+++. ++.++|.++.. .|++++|+++|+++++++|+++.++ ..++.++
T Consensus 4 ~~~a~~~~-~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~ 81 (99)
T 2kc7_A 4 LKTIKELI-NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRK-LGDWQKALNNYQSAIELNPDSPALQARKMVMDIL 81 (99)
T ss_dssp HHHHHHHH-HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHH
T ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 46788788 499999999999999999999999 99999998765 7899999999999999999999988 6667766
Q ss_pred HHcCCCccc
Q 009204 518 WNTGGEETC 526 (540)
Q Consensus 518 ~~~GR~Et~ 526 (540)
....+....
T Consensus 82 ~~~~~~~~~ 90 (99)
T 2kc7_A 82 NFYNKDMYN 90 (99)
T ss_dssp HHHCCTTHH
T ss_pred HHHHHHhcc
Confidence 665554443
No 151
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.93 E-value=1.2e-09 Score=100.05 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=93.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNP----LLLLNYAQFLHLVTKDYDRAEECFKRAIQS------DPPDAEALSQYADFLWL 484 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np----~allNLA~~L~~~~GD~deAEe~feRALeL------DPndAeAl~NLA~~L~~ 484 (540)
..|++++|..+|+++++.+|+++ .++.++|.++. ..|++++|+++|++|+++ .|..+.++.++|.++.
T Consensus 17 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~- 94 (338)
T 3ro2_A 17 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK- 94 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-
T ss_pred HhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHH-
Confidence 34899999999999999999995 67889999888 499999999999999998 5666789999998776
Q ss_pred HcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q 009204 485 VRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGG 522 (540)
Q Consensus 485 ~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR 522 (540)
..|++++|+++|++++++.|.. ..++.++|.++...|+
T Consensus 95 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 95 VLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 5799999999999999987644 3488999999999998
No 152
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.93 E-value=1.6e-09 Score=103.28 Aligned_cols=109 Identities=8% Similarity=0.012 Sum_probs=90.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL------LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~------allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.|++++|..+|+++++..|.... ++.++|.++. ..|++++|+.+|++++++.|.. +.++.++|.++.
T Consensus 200 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 278 (406)
T 3sf4_A 200 LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 278 (406)
T ss_dssp HTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHH
Confidence 48899999999999988665544 8888898888 4999999999999999887766 778888888765
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009204 484 LVRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 484 ~~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~Et~ 526 (540)
..|++++|+++|++|+++.+.. +.++.++|.++..+|++++|
T Consensus 279 -~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 279 -LLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred -HhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4788999999999999886644 66888999999999987753
No 153
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.92 E-value=2.9e-09 Score=109.70 Aligned_cols=103 Identities=14% Similarity=0.226 Sum_probs=61.6
Q ss_pred HHHHHHHHHHH-cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 009204 421 RTDLLYQMGVA-EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA-EALSQYADFLWLVRKDLWAAEETYQQ 498 (540)
Q Consensus 421 eAe~lYqkALa-lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA-eAl~NLA~~L~~~rGD~EEAee~feK 498 (540)
+|...|++|++ .+|++..+|.++|.++. ..|++++|...|++|++++|+++ .+|.+++.++.. .|++++|.++|++
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~-~~~~~~A~~~~~~ 381 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEE-SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARR-AEGIKSGRMIFKK 381 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHH-hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHH-hcCHHHHHHHHHH
Confidence 66666666665 56666666666666555 36666666666666666666664 466666665433 4556666666666
Q ss_pred HHHhCCCCHHHHHHHHHHH-HHcCCCcc
Q 009204 499 AMAAEPNSSSYASKYASFL-WNTGGEET 525 (540)
Q Consensus 499 ALeLDPdnpeal~NLA~~L-~~~GR~Et 525 (540)
|++..|.+...+...+.+. ...|++++
T Consensus 382 Al~~~~~~~~~~~~~a~~~~~~~~~~~~ 409 (530)
T 2ooe_A 382 AREDARTRHHVYVTAALMEYYCSKDKSV 409 (530)
T ss_dssp HHTCTTCCTHHHHHHHHHHHHHTCCHHH
T ss_pred HHhccCCchHHHHHHHHHHHHHcCChhH
Confidence 6666666555555444432 23555544
No 154
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.92 E-value=1.8e-08 Score=96.00 Aligned_cols=109 Identities=13% Similarity=0.038 Sum_probs=91.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL------LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~------allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.|++++|...|+++++..|.... .+..+|.++. ..|++++|+.+|++|+++.+.. +.++.++|.++.
T Consensus 88 ~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 2qfc_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp TTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH-TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 48999999999999999887663 3556777666 5899999999999999876554 668999999876
Q ss_pred HHcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHcCCCccc
Q 009204 484 LVRKDLWAAEETYQQAM---AAEPNSS----SYASKYASFLWNTGGEETC 526 (540)
Q Consensus 484 ~~rGD~EEAee~feKAL---eLDPdnp----eal~NLA~~L~~~GR~Et~ 526 (540)
. .|++++|+.+|++|+ +..|++. .++.++|.++..+|++++|
T Consensus 167 ~-~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A 215 (293)
T 2qfc_A 167 E-NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEES 215 (293)
T ss_dssp H-TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred H-cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHH
Confidence 4 799999999999999 5577654 5899999999999998854
No 155
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.91 E-value=1.5e-09 Score=104.82 Aligned_cols=106 Identities=8% Similarity=0.002 Sum_probs=78.5
Q ss_pred CCCHHHHHHHHHHHHHcCCC--C----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPN--N----PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~--N----p~allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.|++++|..+|++|+++.+. + ..++.++|.++. . |++++|+++|++|+++.|.. +.++.++|.++.
T Consensus 89 ~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~ 166 (307)
T 2ifu_A 89 LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLV 166 (307)
T ss_dssp TTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Confidence 47888888888888887432 2 356777887765 4 88888888888888887654 567788887765
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCc
Q 009204 484 LVRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGEE 524 (540)
Q Consensus 484 ~~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~E 524 (540)
..|++++|+++|++|+++.|++ ..++.++|.++..+|+++
T Consensus 167 -~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 212 (307)
T 2ifu_A 167 -RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYV 212 (307)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred -HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHH
Confidence 4688888888888888876644 246777788888888865
No 156
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.91 E-value=1.2e-09 Score=107.01 Aligned_cols=110 Identities=10% Similarity=0.029 Sum_probs=92.9
Q ss_pred CCCCHHHHHHHHHHHHHc---CC---CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCC-------CCHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAE---EP---NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDP-------PDAEALSQYADF 481 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal---DP---~Np~allNLA~~L~~~~GD~deAEe~feRALeLDP-------ndAeAl~NLA~~ 481 (540)
..|++++|..+|++|+++ .+ ..+.++.++|.++.. .|++++|+.+|++|+++.+ ..+.++.++|.+
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~ 193 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYY-MKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATN 193 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHH
Confidence 348999999999999997 23 356789999999884 9999999999999999843 335689999987
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCCccc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPNSS------SYASKYASFLWNTGGEETC 526 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPdnp------eal~NLA~~L~~~GR~Et~ 526 (540)
+. ..|++++|+++|++|+++.|... .++.++|.++..+|++++|
T Consensus 194 ~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 243 (383)
T 3ulq_A 194 FL-DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDA 243 (383)
T ss_dssp HH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HH-HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHH
Confidence 76 47999999999999999866433 4899999999999998753
No 157
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.90 E-value=3.4e-09 Score=92.41 Aligned_cols=109 Identities=17% Similarity=0.113 Sum_probs=89.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHHHHcCCH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ------SDPPDAEALSQYADFLWLVRKDL 489 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALe------LDPndAeAl~NLA~~L~~~rGD~ 489 (540)
.|++++|+..++......+..+.++.++|.++. ..|++++|+.+|++|++ ..|..+.++.++|.++. ..|++
T Consensus 5 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~ 82 (203)
T 3gw4_A 5 AHDYALAERQAQALLAHPATASGARFMLGYVYA-FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER-MAGNW 82 (203)
T ss_dssp --CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-HTTCH
T ss_pred cccHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH-HcCCH
Confidence 589999999666555433367889999999888 49999999999999999 56667789999998776 47999
Q ss_pred HHHHHHHHHHHHh---CCCC----HHHHHHHHHHHHHcCCCccc
Q 009204 490 WAAEETYQQAMAA---EPNS----SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 490 EEAee~feKALeL---DPdn----peal~NLA~~L~~~GR~Et~ 526 (540)
++|+++|++|+++ .+++ ..++.++|.++..+|+++++
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 126 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGA 126 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999998 4433 45789999999999998753
No 158
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.88 E-value=1.1e-08 Score=94.03 Aligned_cols=100 Identities=13% Similarity=0.026 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHH---cC
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLV----TKDYDRAEECFKRAIQSDP--PDAEALSQYADFLWLV---RK 487 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~----~GD~deAEe~feRALeLDP--ndAeAl~NLA~~L~~~---rG 487 (540)
.++++|..+|++|+. +.++.+++++|.++. . .+|+++|+++|++|++..| +++.++.++|.++... .+
T Consensus 67 ~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~-~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~ 143 (212)
T 3rjv_A 67 ADYPQARQLAEKAVE--AGSKSGEIVLARVLV-NRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPE 143 (212)
T ss_dssp CCHHHHHHHHHHHHH--TTCHHHHHHHHHHHT-CGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSC
T ss_pred CCHHHHHHHHHHHHH--CCCHHHHHHHHHHHH-cCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCC
Confidence 389999999999965 679999999999876 4 7899999999999999988 4599999999977642 56
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 009204 488 DLWAAEETYQQAMAAEPNSSSYASKYASFLWNT 520 (540)
Q Consensus 488 D~EEAee~feKALeLDPdnpeal~NLA~~L~~~ 520 (540)
|+++|+.+|++|+++ |+++.+++++|.+|...
T Consensus 144 d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 144 DDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp CHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHcC
Confidence 899999999999998 78888999999998764
No 159
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.88 E-value=2.6e-09 Score=101.86 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=93.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP----LLLLNYAQFLHLVTKDYDRAEECFKRAIQS------DPPDAEALSQYADFLWLV 485 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np----~allNLA~~L~~~~GD~deAEe~feRALeL------DPndAeAl~NLA~~L~~~ 485 (540)
.|++++|..+|+++++.+|+++ .++.++|.++. ..|++++|+.+|++|+++ .|..+.++.++|.++. .
T Consensus 22 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~ 99 (406)
T 3sf4_A 22 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYF-YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLK-V 99 (406)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-H
T ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH-H
Confidence 4899999999999999999995 57889999888 499999999999999998 5666789999998776 4
Q ss_pred cCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCC
Q 009204 486 RKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGG 522 (540)
Q Consensus 486 rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR 522 (540)
.|++++|+.+|++|+++.|.. +.++.++|.++...|+
T Consensus 100 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 100 LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 799999999999999997754 4589999999999998
No 160
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.87 E-value=1.7e-08 Score=77.70 Aligned_cols=68 Identities=28% Similarity=0.324 Sum_probs=63.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWL 484 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~ 484 (540)
.+++++|+.+|+++++.+|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++..
T Consensus 22 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~ 89 (91)
T 1na3_A 22 QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY-KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 89 (91)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH-HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 489999999999999999999999999999988 49999999999999999999999999999987643
No 161
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.87 E-value=2e-09 Score=104.31 Aligned_cols=110 Identities=13% Similarity=0.001 Sum_probs=95.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPL------LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFL 482 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~------allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L 482 (540)
..|++++|..+|++++++.|.+.. ++.++|.++. ..|++++|+++|++++++.|.. +.++.++|.++
T Consensus 235 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 313 (411)
T 4a1s_A 235 LLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHI-FLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTY 313 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-TTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH-HCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 348999999999999998776444 8899999888 5999999999999999998855 77899999877
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009204 483 WLVRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 483 ~~~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~Et~ 526 (540)
. ..|++++|+++|++++++.+.. ..++.++|.++..+|++++|
T Consensus 314 ~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 362 (411)
T 4a1s_A 314 T-LLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERA 362 (411)
T ss_dssp H-HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred H-HcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHH
Confidence 5 5799999999999999986543 45899999999999998754
No 162
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.86 E-value=2.5e-09 Score=103.27 Aligned_cols=109 Identities=18% Similarity=0.098 Sum_probs=91.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC--C----HHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPP--D----AEALSQYADFL 482 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N------p~allNLA~~L~~~~GD~deAEe~feRALeLDPn--d----AeAl~NLA~~L 482 (540)
..|++++|..+|++|+.+.+.. ..++.++|.++. ..|++++|+.+|++|+++.+. + +.++.++|.++
T Consensus 48 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~ 126 (307)
T 2ifu_A 48 NAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLK-DLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLM 126 (307)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3489999999999999986543 457889998887 599999999999999998432 2 46788999876
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009204 483 WLVRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 483 ~~~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~Et~ 526 (540)
. . |++++|+++|++|+++.|.. ..++.++|.++..+|++++|
T Consensus 127 ~-~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A 174 (307)
T 2ifu_A 127 E-P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEA 174 (307)
T ss_dssp T-T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred H-c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHH
Confidence 4 4 99999999999999998754 57899999999999998753
No 163
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.83 E-value=2.4e-09 Score=106.35 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=48.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee 494 (540)
..++|++|+.+|++||+++|+++.+++++|.++. ..|++++|+.+|++|++++|+++.++.+++.+....+++.++|..
T Consensus 242 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~-~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~ 320 (338)
T 2if4_A 242 KLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKA-ELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKE 320 (338)
T ss_dssp TTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHTTC----------------------------
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4589999999999999999999999999999998 599999999999999999999999999999876666778899999
Q ss_pred HHHHHHHhCCCCHH
Q 009204 495 TYQQAMAAEPNSSS 508 (540)
Q Consensus 495 ~feKALeLDPdnpe 508 (540)
.|++++..+|+++.
T Consensus 321 ~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 321 MYKGIFKGKDEGGA 334 (338)
T ss_dssp --------------
T ss_pred HHHHhhCCCCCCCC
Confidence 99999999998764
No 164
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.83 E-value=2.5e-09 Score=97.78 Aligned_cols=109 Identities=8% Similarity=0.012 Sum_probs=93.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL------LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~------allNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.|++++|..+|+++++..|.... ++.++|.++. ..|++++|+++|++++++.+.. +.++.++|.++.
T Consensus 196 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 274 (338)
T 3ro2_A 196 LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYI-FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 274 (338)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 48999999999999988654332 8889999888 4999999999999999997776 778899998776
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCCccc
Q 009204 484 LVRKDLWAAEETYQQAMAAEPNS------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 484 ~~rGD~EEAee~feKALeLDPdn------peal~NLA~~L~~~GR~Et~ 526 (540)
..|++++|+.+|++|+++.+.. ..++..+|.++..+|++++|
T Consensus 275 -~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 322 (338)
T 3ro2_A 275 -LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 322 (338)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred -HhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHH
Confidence 4799999999999999986643 45889999999999998754
No 165
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=7.1e-09 Score=95.30 Aligned_cols=98 Identities=17% Similarity=0.076 Sum_probs=86.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---HcCC
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK----DYDRAEECFKRAIQSDPPDAEALSQYADFLWL---VRKD 488 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G----D~deAEe~feRALeLDPndAeAl~NLA~~L~~---~rGD 488 (540)
.+++++|..+|++|++. .++.+++++|.++. . + |+++|+++|++|++ ++++.++.++|.++.. ..+|
T Consensus 31 ~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~-~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d 104 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAAAQ--GDGDALALLAQLKI-R-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATD 104 (212)
T ss_dssp HTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTT-S-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCC
T ss_pred CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHH-c-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccC
Confidence 38999999999999875 68999999999877 3 6 99999999999954 7899999999987643 1579
Q ss_pred HHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHH
Q 009204 489 LWAAEETYQQAMAAEP--NSSSYASKYASFLWN 519 (540)
Q Consensus 489 ~EEAee~feKALeLDP--dnpeal~NLA~~L~~ 519 (540)
+++|+++|++|++..| +++.+++++|.+|..
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 9999999999999998 469999999999988
No 166
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.82 E-value=9.6e-09 Score=97.83 Aligned_cols=109 Identities=13% Similarity=0.040 Sum_probs=88.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLL------LLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQYADFLW 483 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~a------llNLA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~NLA~~L~ 483 (540)
.+++++|..+|++++...+.++.. +.++|.++. ..+++++|+.+|++|+++.+.. ..++.++|.++.
T Consensus 88 ~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 3u3w_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVL-KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp TTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHT-TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHH-cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 489999999999999998887762 334677666 5889999999999999975443 347899998776
Q ss_pred HHcCCHHHHHHHHHHHHHh-------CCCCHHHHHHHHHHHHHcCCCccc
Q 009204 484 LVRKDLWAAEETYQQAMAA-------EPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 484 ~~rGD~EEAee~feKALeL-------DPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
..|++++|+.+|++|++. .+....++.++|.++..+|++++|
T Consensus 167 -~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A 215 (293)
T 3u3w_A 167 -ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEES 215 (293)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred -HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHH
Confidence 479999999999999953 223445789999999999998864
No 167
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.80 E-value=1.4e-08 Score=83.06 Aligned_cols=70 Identities=11% Similarity=0.012 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 456 RAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 456 eAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
+|+++|+++++++|+++.++.++|.++. ..|++++|+.+|+++++++|+++.++.++|.++..+|++++|
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 72 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYA-EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGA 72 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHH-HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 6899999999999999999999999876 479999999999999999999999999999999999998753
No 168
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.79 E-value=7.5e-09 Score=101.57 Aligned_cols=109 Identities=17% Similarity=-0.008 Sum_probs=89.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCC------CCHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPN-------NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDP------PDAEALSQYADF 481 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~-------Np~allNLA~~L~~~~GD~deAEe~feRALeLDP------ndAeAl~NLA~~ 481 (540)
..|++++|..+|++|+...+. .+.++.++|.++. ..|++++|+++|++|+++.+ ..+.++.++|.+
T Consensus 153 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 231 (378)
T 3q15_A 153 HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD-DFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANS 231 (378)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 348899999999999987443 2457788999888 49999999999999999743 224578889987
Q ss_pred HHHHcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 482 LWLVRKDLWAAEETYQQAMA-----AEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALe-----LDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+.. .|++++|+++|++|++ .+|..+.++.++|.++..+|++++
T Consensus 232 y~~-~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 279 (378)
T 3q15_A 232 YDR-SGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQK 279 (378)
T ss_dssp HHH-HTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHH
T ss_pred HHH-CCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHH
Confidence 664 7899999999999999 788888899999999999999764
No 169
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.78 E-value=9e-08 Score=103.06 Aligned_cols=103 Identities=8% Similarity=-0.101 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC-CHHHHHHH
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK--DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRK-DLWAAEET 495 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G--D~deAEe~feRALeLDPndAeAl~NLA~~L~~~rG-D~EEAee~ 495 (540)
++++...|+++++.+|++..+|++.+.++. ..+ ++++|.++++++|++||.+..+|.+.+.++.. .| .+++|+++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~-~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~-l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHH-cCCChHHHHHH
Confidence 899999999999999999999999999988 599 77999999999999999999999999988765 56 89999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGE 523 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~ 523 (540)
+.++|+.+|.|..+|.+.+.++..+++.
T Consensus 167 ~~~~I~~~p~n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp HHTTTTTTCCCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHCCCCccHHHHHHHHHHhhccc
Confidence 9999999999999999999999987554
No 170
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.78 E-value=1.2e-08 Score=103.46 Aligned_cols=87 Identities=10% Similarity=0.103 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH----------------cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 009204 437 PLLLLNYAQFLHLVTKDYDRAEECFKRAIQ----------------SDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500 (540)
Q Consensus 437 p~allNLA~~L~~~~GD~deAEe~feRALe----------------LDPndAeAl~NLA~~L~~~rGD~EEAee~feKAL 500 (540)
+..+.++|..++ ..|++++|+++|++||+ ++|.++.++.++|.+++ ..|++++|+++|++|+
T Consensus 223 a~~~~~~g~~~~-~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 223 SEDLKNIGNTFF-KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKL-KMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHH
Confidence 456888999988 49999999999999999 88999999999999876 4799999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 501 AAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 501 eLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+++|+++.+++++|.+|..+|++++
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~e 325 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQ 325 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHH
Confidence 9999999999999999999999874
No 171
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.77 E-value=1.8e-09 Score=112.75 Aligned_cols=89 Identities=16% Similarity=0.038 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 009204 436 NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYAS 515 (540)
Q Consensus 436 Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~ 515 (540)
++.++.++|..+. ..|++++|+++|++|++++|+++.++.++|.++.. .|++++|+++|++|++++|+++.++.++|.
T Consensus 5 ~a~~~~~lg~~~~-~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 5 RAEELKTQANDYF-KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLR-TECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHTTSSSSSSSTT-TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3455667787777 59999999999999999999999999999998764 799999999999999999999999999999
Q ss_pred HHHHcCCCccc
Q 009204 516 FLWNTGGEETC 526 (540)
Q Consensus 516 ~L~~~GR~Et~ 526 (540)
++..+|++++|
T Consensus 83 ~~~~~g~~~eA 93 (477)
T 1wao_1 83 SNMALGKFRAA 93 (477)
T ss_dssp HHHHHTCHHHH
T ss_pred HHHHcCCHHHH
Confidence 99999998753
No 172
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.75 E-value=5.1e-08 Score=104.98 Aligned_cols=105 Identities=8% Similarity=-0.072 Sum_probs=96.3
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKD----------YDRAEECFKRAIQSDPPDAEALSQYADFLWLVRK 487 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD----------~deAEe~feRALeLDPndAeAl~NLA~~L~~~rG 487 (540)
..++|..+|.++|+.+|++..+|+..+.++.. .|+ +++|.++++++|+.+|++..+|++.++++. ..+
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~-l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~-~l~ 121 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLS-RLP 121 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-TCS
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHHh-cccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-Hcc
Confidence 34788999999999999999999999998884 777 999999999999999999999999999875 467
Q ss_pred --CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CCc
Q 009204 488 --DLWAAEETYQQAMAAEPNSSSYASKYASFLWNTG-GEE 524 (540)
Q Consensus 488 --D~EEAee~feKALeLDPdnpeal~NLA~~L~~~G-R~E 524 (540)
++++|++++.+++++||.|..+|.+.+.++...| +++
T Consensus 122 ~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~ 161 (567)
T 1dce_A 122 EPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPA 161 (567)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHH
T ss_pred cccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChH
Confidence 6799999999999999999999999999999999 443
No 173
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.74 E-value=1e-07 Score=95.86 Aligned_cols=103 Identities=11% Similarity=-0.006 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHH----HHhc---CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHH
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFL----HLVT---KDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLW 490 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L----~~~~---GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~E 490 (540)
+++++..++.++|..+|++..+|+..+.++ .. . ++++++++++.++|+++|.+..+|++.+.++. ..++++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~-l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~-~l~~~~ 161 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMEL-NNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVD-TFDLHN 161 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHH-TTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCTT
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHh-ccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhcccC
Confidence 677777777777777777777777777666 42 4 56777777777777777777777777776554 355666
Q ss_pred --HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 491 --AAEETYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 491 --EAee~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
++++++.++++.||.|..+|.+.+.++...|+
T Consensus 162 ~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 162 DAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 77777777777777777777777777766554
No 174
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.73 E-value=4.5e-08 Score=81.88 Aligned_cols=73 Identities=18% Similarity=0.144 Sum_probs=66.5
Q ss_pred CCCCHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 009204 433 EPNNPLLLLNYAQFLHLVTKD---YDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSS 507 (540)
Q Consensus 433 DP~Np~allNLA~~L~~~~GD---~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnp 507 (540)
+|+|+.++..||.+++. .++ .++|..++++||++||+++.++..+|..++. .|+|++|+.+|+++++.+|.++
T Consensus 2 ~p~~~~~~~~~a~al~~-~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 2 NAVTATQLAAKATTLYY-LHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCCHHHHHHHHHHHHH-TTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCCHHHHHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCc
Confidence 79999999999999874 555 7999999999999999999999999998775 8999999999999999999843
No 175
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.70 E-value=1.4e-08 Score=108.07 Aligned_cols=108 Identities=14% Similarity=0.065 Sum_probs=88.6
Q ss_pred CCCCHHHHHHHHHHHHHc-----CCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHc-----CCCCH---HHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAE-----EPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQS-----DPPDA---EALSQY 478 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal-----DP~Np~---allNLA~~L~~~~GD~deAEe~feRALeL-----DPndA---eAl~NL 478 (540)
.+|+|++|+.+|+++|+. -|+++. .+.|+|.+|. .+|++++|+.+|++||++ -|+++ ..++|+
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 399 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLS-YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRA 399 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 569999999999999986 567764 6788999888 599999999999999986 45554 478999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHcCCCc
Q 009204 479 ADFLWLVRKDLWAAEETYQQAMAA-----EPNSSSY---ASKYASFLWNTGGEE 524 (540)
Q Consensus 479 A~~L~~~rGD~EEAee~feKALeL-----DPdnpea---l~NLA~~L~~~GR~E 524 (540)
|.+++. +|++++|+.+|++|+++ -|++|.+ ..+++.++..+|+++
T Consensus 400 a~~~~~-~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~ 452 (490)
T 3n71_A 400 GLTNWH-AGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR 452 (490)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-CCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 998764 79999999999999984 6777765 567777777777654
No 176
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.70 E-value=8.2e-09 Score=95.95 Aligned_cols=70 Identities=13% Similarity=0.197 Sum_probs=64.0
Q ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q 009204 451 TKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD----------LWAAEETYQQAMAAEPNSSSYASKYASFLWNT 520 (540)
Q Consensus 451 ~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD----------~EEAee~feKALeLDPdnpeal~NLA~~L~~~ 520 (540)
.+.+++|++.|++|++++|+++++|.++|.++.. .++ +++|+..|++||+++|+++++++++|.+|..+
T Consensus 15 ~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~-l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~l 93 (158)
T 1zu2_A 15 ILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLE-LSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSF 93 (158)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-hcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHh
Confidence 6678999999999999999999999999998765 333 56999999999999999999999999999988
Q ss_pred C
Q 009204 521 G 521 (540)
Q Consensus 521 G 521 (540)
|
T Consensus 94 g 94 (158)
T 1zu2_A 94 A 94 (158)
T ss_dssp H
T ss_pred c
Confidence 6
No 177
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.70 E-value=3.3e-08 Score=95.61 Aligned_cols=108 Identities=18% Similarity=0.147 Sum_probs=89.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL-----LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA------EALSQYADFLWL 484 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~-----allNLA~~L~~~~GD~deAEe~feRALeLDPndA------eAl~NLA~~L~~ 484 (540)
.|++++|..++++++...|.+.. ++.++|.++. ..|++++|+++|++|+++.|... .++.++|.++.
T Consensus 27 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~- 104 (373)
T 1hz4_A 27 DGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLH-CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF- 104 (373)
T ss_dssp TTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-
T ss_pred CCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-
Confidence 48999999999999999876532 6778888888 59999999999999999866543 23678888765
Q ss_pred HcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCCcc
Q 009204 485 VRKDLWAAEETYQQAMAAE--------PNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 485 ~rGD~EEAee~feKALeLD--------Pdnpeal~NLA~~L~~~GR~Et 525 (540)
..|++++|+++|++++++. |....++.++|.+++.+|++++
T Consensus 105 ~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 153 (373)
T 1hz4_A 105 AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDE 153 (373)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHH
Confidence 5899999999999999975 4455678899999999999874
No 178
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.70 E-value=3.2e-08 Score=95.65 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=90.1
Q ss_pred CCCHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC--------CCCHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNP------LLLLNYAQFLHLVTKDYDRAEECFKRAIQSD--------PPDAEALSQYADF 481 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np------~allNLA~~L~~~~GD~deAEe~feRALeLD--------PndAeAl~NLA~~ 481 (540)
.|++++|..+|++++++.|... .++.++|.++. ..|++++|+++|++++++. |....++.++|.+
T Consensus 66 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~-~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 144 (373)
T 1hz4_A 66 KGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILF-AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQL 144 (373)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHH
Confidence 4899999999999999865433 23678898888 4999999999999999975 4456678889987
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHcCCCccc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEPN-----SSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDPd-----npeal~NLA~~L~~~GR~Et~ 526 (540)
++. .|++++|+.++++++++.|. ...++.++|.++...|+++++
T Consensus 145 ~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 193 (373)
T 1hz4_A 145 LWA-WARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNA 193 (373)
T ss_dssp HHH-TTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHH
T ss_pred HHH-hcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 764 79999999999999999875 346788999999999998753
No 179
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.67 E-value=4.3e-08 Score=99.67 Aligned_cols=90 Identities=14% Similarity=0.187 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHh----cCCHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHcCCH
Q 009204 417 MDYFRTDLLYQMGVAEEPN--NPLLLLNYAQFLHLV----TKDYDRAEECFKRAIQSDPPD-AEALSQYADFLWLVRKDL 489 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~--Np~allNLA~~L~~~----~GD~deAEe~feRALeLDPnd-AeAl~NLA~~L~~~rGD~ 489 (540)
+...+|...+++||++||+ ++.+|.-+|.+|+.. -|+.++|+++|+|||+++|+. ..++..||.++....||+
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 4578999999999999999 777999999987731 399999999999999999985 999999999887656999
Q ss_pred HHHHHHHHHHHHhCCCC
Q 009204 490 WAAEETYQQAMAAEPNS 506 (540)
Q Consensus 490 EEAee~feKALeLDPdn 506 (540)
++|.+++++|++++|..
T Consensus 257 ~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 257 AGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 99999999999998873
No 180
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.66 E-value=1.1e-07 Score=93.41 Aligned_cols=123 Identities=15% Similarity=0.034 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHhhchhhhhhccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCC------CCHHHHHHHH
Q 009204 371 EELDLWNSVLDEALRIQEESEYRILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEP------NNPLLLLNYA 444 (540)
Q Consensus 371 ee~~LW~~~L~eap~~q~~~~~eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP------~Np~allNLA 444 (540)
.+...++.+++..++.. ...+.....+...+.+. ...|++++|..+|++|+++.+ ....++.++|
T Consensus 159 ~A~~~~~~al~~~~~~~------~~~~~~~~~~~~lg~~y---~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg 229 (378)
T 3q15_A 159 VSMYHILQALDIYQNHP------LYSIRTIQSLFVIAGNY---DDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIA 229 (378)
T ss_dssp HHHHHHHHHHHHHHTST------TCHHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCC------CchhhHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45555666666555432 11223344444433332 245999999999999999733 1245788999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 009204 445 QFLHLVTKDYDRAEECFKRAIQ-----SDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEP 504 (540)
Q Consensus 445 ~~L~~~~GD~deAEe~feRALe-----LDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDP 504 (540)
.++. ..|++++|+++|++|++ .+|..+.++.++|.++.. .|++++|++++++|+++.+
T Consensus 230 ~~y~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 230 NSYD-RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCK-AGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHH-HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCC
T ss_pred HHHH-HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHH
Confidence 9988 49999999999999999 889999999999998764 7999999999999999844
No 181
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.65 E-value=2.2e-07 Score=93.43 Aligned_cols=106 Identities=11% Similarity=0.071 Sum_probs=98.0
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC------
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYD--RAEECFKRAIQSDPPDAEALSQYADFLWLVRKD------ 488 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~d--eAEe~feRALeLDPndAeAl~NLA~~L~~~rGD------ 488 (540)
++++++..++.++++.+|.|..+|...+.++. ..|+++ +++++++++|++||.|..+|++.+.++.. .++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~-~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~-l~~~~~~~~ 201 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVD-TFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS-KKHLATDNT 201 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS-SGGGCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh-ccccchhhh
Confidence 67899999999999999999999999999888 499988 99999999999999999999999987654 455
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 489 LWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 489 ~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
+++++++++++|..+|+|..+|..++.++...|+..
T Consensus 202 ~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~ 237 (306)
T 3dra_A 202 IDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSI 237 (306)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCCh
Confidence 999999999999999999999999999999999854
No 182
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.61 E-value=2.3e-08 Score=100.35 Aligned_cols=139 Identities=8% Similarity=-0.090 Sum_probs=95.5
Q ss_pred ChHHHHH-HHHHHHHHhhchhhhhh-c---cCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcC-CCC-HHHHH
Q 009204 369 NKEELDL-WNSVLDEALRIQEESEY-R---ILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEE-PNN-PLLLL 441 (540)
Q Consensus 369 ~~ee~~L-W~~~L~eap~~q~~~~~-e---aLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalD-P~N-p~all 441 (540)
+.+++.| +-.++.++.+..++... . ..+|+-...++- +. ..-..++|++|+.+|++++... |.. ..+++
T Consensus 100 ~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~-a~---l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~ 175 (282)
T 4f3v_A 100 SPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMK-AV---VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGV 175 (282)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHH-HH---HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHH
T ss_pred CHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHH-HH---HHHHcCCHHHHHHHHHHhhccCCcccHHHHHH
Confidence 3456664 66777777776655443 2 224444333322 11 1334588999999998887753 221 34788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcC--CC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 009204 442 NYAQFLHLVTKDYDRAEECFKRAIQSD--PP-DAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYA 514 (540)
Q Consensus 442 NLA~~L~~~~GD~deAEe~feRALeLD--Pn-dAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA 514 (540)
++|.++.. .|++++|+.+|++++.-. |. .+++++++|.++.. .|+.++|..+|+++++.+|+ +.++..+.
T Consensus 176 ~LG~al~~-LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~-lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 176 AHGVAAAN-LALFTEAERRLTEANDSPAGEACARAIAWYLAMARRS-QGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHHHHHHH-TTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHH-CCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 88888884 999999999999998654 55 66788888887654 68899999999999999998 77665543
No 183
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.61 E-value=3.1e-07 Score=79.97 Aligned_cols=81 Identities=15% Similarity=0.045 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH---hcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---cCCHHH
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHL---VTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV---RKDLWA 491 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L~~---~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~---rGD~EE 491 (540)
..++|..+|++|.+. .++.+++++|.++.. ..+|+++|.++|++|.+. +++.++.++|.++... .+|+++
T Consensus 40 ~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 115 (138)
T 1klx_A 40 NKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQ 115 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHH
Confidence 344455555555543 344555555544431 034555555555555443 4455555555443321 344555
Q ss_pred HHHHHHHHHHh
Q 009204 492 AEETYQQAMAA 502 (540)
Q Consensus 492 Aee~feKALeL 502 (540)
|+++|++|.+.
T Consensus 116 A~~~~~~Aa~~ 126 (138)
T 1klx_A 116 AVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 55555555544
No 184
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.60 E-value=1.5e-07 Score=98.73 Aligned_cols=96 Identities=10% Similarity=0.080 Sum_probs=80.7
Q ss_pred CCCCCHHHHHHHHHHHHHc-----CCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHc-----CCCCH---HHHHH
Q 009204 414 DDYMDYFRTDLLYQMGVAE-----EPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQS-----DPPDA---EALSQ 477 (540)
Q Consensus 414 d~~Gd~eeAe~lYqkALal-----DP~Np~---allNLA~~L~~~~GD~deAEe~feRALeL-----DPndA---eAl~N 477 (540)
..+|+|++|+.+|+++|+. .|+++. .+.|+|.+|. .+|++++|+.+|++||++ -|+++ ..++|
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~-~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 387 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCL-YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLK 387 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHH-hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 3568999999999999985 677775 5778999888 599999999999999986 45554 57999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHH
Q 009204 478 YADFLWLVRKDLWAAEETYQQAMAA-----EPNSSSYAS 511 (540)
Q Consensus 478 LA~~L~~~rGD~EEAee~feKALeL-----DPdnpeal~ 511 (540)
+|.+++. +|++++|+.+|++|+++ -|++|.+..
T Consensus 388 La~~~~~-qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 388 LGRLYMG-LENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHHh-ccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 9998764 79999999999999985 688887654
No 185
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.59 E-value=2.6e-07 Score=95.25 Aligned_cols=107 Identities=8% Similarity=-0.053 Sum_probs=98.1
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC-CHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK-DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRK-DLWAAEE 494 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G-D~deAEe~feRALeLDPndAeAl~NLA~~L~~~rG-D~EEAee 494 (540)
+..++|..++.++|.++|++..+|+..+.++.. .| ++++++++++++|..+|++..+|++.+.++....+ +++++++
T Consensus 68 e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~-l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~ 146 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTVWQYRFSLLTS-LNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIE 146 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHH
Confidence 345789999999999999999999999998884 77 69999999999999999999999999998766436 8999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 495 TYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
++.++++.+|.|..+|.+.+.++...|+++
T Consensus 147 ~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 147 YIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999888766
No 186
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.58 E-value=1.4e-07 Score=77.28 Aligned_cols=89 Identities=7% Similarity=0.007 Sum_probs=74.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC------CHHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNN------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPP------DAEALSQYADFL 482 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~N------p~allNLA~~L~~~~GD~deAEe~feRALeLDPn------dAeAl~NLA~~L 482 (540)
..|++++|..+|+++++..+.. ..++.++|.++. ..|++++|+++|++++++.+. .+.++.++|.++
T Consensus 61 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~ 139 (164)
T 3ro3_A 61 FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT-LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAY 139 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHH
Confidence 3489999999999999986543 568889999888 499999999999999987432 256788899877
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCC
Q 009204 483 WLVRKDLWAAEETYQQAMAAEPN 505 (540)
Q Consensus 483 ~~~rGD~EEAee~feKALeLDPd 505 (540)
.. .|++++|++++++++++...
T Consensus 140 ~~-~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 140 TA-LGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HH-HTCHHHHHHHHHHHHHHHTT
T ss_pred HH-ccCHHHHHHHHHHHHHHHHH
Confidence 64 78999999999999987654
No 187
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.56 E-value=9.3e-07 Score=76.93 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=85.0
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---cCCHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV---RKDLWAAE 493 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~---rGD~EEAe 493 (540)
.++++|..+|++|.+.....+. +|.++. ..+..++|.++|++|.+. +++.+++++|.++... .+|+++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~~~a~----lg~~y~-~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNEMFGC----LSLVSN-SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHH----HHHHTC-TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCCHhhh----HHHHHH-cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 5789999999999998754444 888777 478899999999999997 7999999999977541 57999999
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCcc
Q 009204 494 ETYQQAMAAEPNSSSYASKYASFLWN----TGGEET 525 (540)
Q Consensus 494 e~feKALeLDPdnpeal~NLA~~L~~----~GR~Et 525 (540)
++|++|.+. .++.+.+++|.+|.. .+++++
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 115 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQ 115 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHH
Confidence 999999987 789999999999988 555543
No 188
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.53 E-value=3.1e-07 Score=94.48 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=73.6
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH--HhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC-----CH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLH--LVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRK-----DL 489 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~--~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rG-----D~ 489 (540)
+++++|..+|+++. |.++.+++++|.+++ ...+|+++|+++|++|++. +++.++.++|.++. .| |+
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~--~G~g~~~d~ 303 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY--EGKWVPADA 303 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH--HCSSSCCCH
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH--cCCCCCCCH
Confidence 67888888888887 788888888888744 3578888888888888754 58888888887664 34 88
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009204 490 WAAEETYQQAMAAEPNSSSYASKYASFLWN 519 (540)
Q Consensus 490 EEAee~feKALeLDPdnpeal~NLA~~L~~ 519 (540)
++|+++|++|. |+++.+++++|.+|..
T Consensus 304 ~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 304 KAAEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 88888888888 8888888888877765
No 189
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.52 E-value=1.1e-06 Score=89.75 Aligned_cols=102 Identities=8% Similarity=-0.116 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC-HHHHHHH
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK--DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKD-LWAAEET 495 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G--D~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD-~EEAee~ 495 (540)
++++..++.++|..+|.+..+|...+.++.. .+ +++++++++.+++++||.|..+|.+.+.++.. .|+ +++++++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~-l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~-l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQ-AAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc-cCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hCcCHHHHHHH
Confidence 7889999999999999999999999998884 77 59999999999999999999999999987654 566 6999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
+.++++.+|.|..+|.+.+.++...+.
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~ 194 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHP 194 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999988743
No 190
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.52 E-value=3.3e-07 Score=94.22 Aligned_cols=97 Identities=15% Similarity=0.051 Sum_probs=82.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---
Q 009204 414 DDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK-----DYDRAEECFKRAIQSDPPDAEALSQYADFLWLV--- 485 (540)
Q Consensus 414 d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G-----D~deAEe~feRALeLDPndAeAl~NLA~~L~~~--- 485 (540)
...+++++|..+|++|++. .++.+++++|.++. .| |+++|+++|++|+ |+++.++.++|.++...
T Consensus 262 ~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~--~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~ 334 (452)
T 3e4b_A 262 PELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY--EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLG 334 (452)
T ss_dssp GGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH--HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTS
T ss_pred CCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH--cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCC
Confidence 3468999999999999864 58999999998776 55 9999999999999 99999999999876531
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009204 486 RKDLWAAEETYQQAMAAEPNSSSYASKYASFLWN 519 (540)
Q Consensus 486 rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~ 519 (540)
..|+++|+.+|++|.+ ++++.+.+++|.+|..
T Consensus 335 ~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 335 KVYPQKALDHLLTAAR--NGQNSADFAIAQLFSQ 366 (452)
T ss_dssp SCCHHHHHHHHHHHHT--TTCTTHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHh--hChHHHHHHHHHHHHh
Confidence 2389999999999976 5677889999998864
No 191
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.51 E-value=7.6e-07 Score=82.47 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHcC-C-CCHHHHHHHHHHHHHHcCCHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK---DYDRAEECFKRAIQSD-P-PDAEALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G---D~deAEe~feRALeLD-P-ndAeAl~NLA~~L~~~rGD~EE 491 (540)
+....+++.|.++++.+|.+.++.++||++|.. .+ +.++++.+++..++.+ | ++.+.++++|..++. .|+|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~-S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~k-l~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR-SKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH-TSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHH-ccCHHH
Confidence 457788999999999999999999999999884 66 7789999999999999 7 678999999998865 789999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHH
Q 009204 492 AEETYQQAMAAEPNSSSYASKYASF 516 (540)
Q Consensus 492 Aee~feKALeLDPdnpeal~NLA~~ 516 (540)
|.++++++++.+|+|..+..-.-.+
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999999999886544433
No 192
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.50 E-value=1.1e-06 Score=73.15 Aligned_cols=80 Identities=13% Similarity=0.113 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 009204 437 PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSD-------PPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSY 509 (540)
Q Consensus 437 p~allNLA~~L~~~~GD~deAEe~feRALeLD-------PndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpea 509 (540)
+.-.+.+|..++. .|+|++|+..|++|++.. +..++++.+||..++. .|++++|+.++++|++++|+++.+
T Consensus 5 a~dc~~lG~~~~~-~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~-~g~~~~A~~~~~~al~l~P~~~~~ 82 (104)
T 2v5f_A 5 AEDCFELGKVAYT-EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQ-QGDLDKALLLTKKLLELDPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHHHH-ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHH-ccCHHHHHHHHHHHHhcCCCCHHH
Confidence 4455678998885 999999999999999963 3567889999988765 789999999999999999999999
Q ss_pred HHHHHHHHH
Q 009204 510 ASKYASFLW 518 (540)
Q Consensus 510 l~NLA~~L~ 518 (540)
+.|++.+-.
T Consensus 83 ~~n~~~~~~ 91 (104)
T 2v5f_A 83 NGNLKYFEY 91 (104)
T ss_dssp HHHHHHHHH
T ss_pred HhhHHHHHH
Confidence 888885443
No 193
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.48 E-value=1.3e-06 Score=90.08 Aligned_cols=103 Identities=9% Similarity=-0.068 Sum_probs=94.8
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc-C-CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHH-----
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVT-K-DYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLW----- 490 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L~~~~-G-D~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~E----- 490 (540)
.++++..++.++|..+|++..+|+..+.++.. . + ++++++++++++|+++|.|..+|.+.+.++.. .+.++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~-l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~-l~~~~~~~~~ 181 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDR-ISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSH-FSTLGRISEA 181 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-HCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHH-HHHTTCCCHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-hcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-hccccccchh
Confidence 58999999999999999999999999998885 5 7 89999999999999999999999999987654 45566
Q ss_pred ---HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 491 ---AAEETYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 491 ---EAee~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
+++++++++++.+|.|..+|.+.+.++...++
T Consensus 182 ~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 182 QWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999887
No 194
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.46 E-value=1.3e-06 Score=89.01 Aligned_cols=103 Identities=13% Similarity=0.069 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---cCCHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTK---DYDRAEECFKRAIQSDPPDAEALSQYADFLWLV---RKDLW 490 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~G---D~deAEe~feRALeLDPndAeAl~NLA~~L~~~---rGD~E 490 (540)
+++++|..+|++|++. .++.+++++|.++.. .| ++++|+++|++|++. +++.++.++|.++... .+|++
T Consensus 310 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~ 384 (490)
T 2xm6_A 310 KNREQAISWYTKSAEQ--GDATAQANLGAIYFR-LGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQ 384 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH-SCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHh-CCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 6788888888888875 457788888887764 45 788888888888876 6788888888766531 46888
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCCccc
Q 009204 491 AAEETYQQAMAAEPNSSSYASKYASFLWN----TGGEETC 526 (540)
Q Consensus 491 EAee~feKALeLDPdnpeal~NLA~~L~~----~GR~Et~ 526 (540)
+|+++|++|++. +++.++.++|.++.. .+++++|
T Consensus 385 ~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A 422 (490)
T 2xm6_A 385 QAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQA 422 (490)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHH
T ss_pred HHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHH
Confidence 888888888875 467888888888877 5555543
No 195
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.45 E-value=2.6e-07 Score=96.48 Aligned_cols=104 Identities=9% Similarity=-0.109 Sum_probs=83.9
Q ss_pred CCCCHHHHHHHHHHHHHc-----CCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHc-----CCCCHH---HHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAE-----EPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQS-----DPPDAE---ALSQY 478 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal-----DP~Np~---allNLA~~L~~~~GD~deAEe~feRALeL-----DPndAe---Al~NL 478 (540)
.+|+|++|+.+|+++|+. .|+++. .+.|+|.+|. .+|++++|+.+++++|++ -|+++. .++|+
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~-~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACI-NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 358999999999999985 577764 6788898888 599999999999999985 455554 68899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHc
Q 009204 479 ADFLWLVRKDLWAAEETYQQAMAA-----EPNSSSY---ASKYASFLWNT 520 (540)
Q Consensus 479 A~~L~~~rGD~EEAee~feKALeL-----DPdnpea---l~NLA~~L~~~ 520 (540)
|.+++. +|++++|+.+|++|+++ -|++|.+ +.+++.+...+
T Consensus 378 a~~~~~-~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 378 GKLQLH-QGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 998765 79999999999999985 6777765 45566665543
No 196
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.45 E-value=1.6e-06 Score=88.65 Aligned_cols=102 Identities=8% Similarity=-0.064 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcC--
Q 009204 420 FRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKD----------YDRAEECFKRAIQSDPPDAEALSQYADFLWLVRK-- 487 (540)
Q Consensus 420 eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD----------~deAEe~feRALeLDPndAeAl~NLA~~L~~~rG-- 487 (540)
++|..++.++|..+|++..+|+..+.++.. .++ +++++.++.++|..+|.+..+|++.+.++.. .+
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~-l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~-l~~~ 124 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQH-LETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR-LPEP 124 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-CSSC
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHH-hcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc-cCcc
Confidence 589999999999999999999999988763 554 7899999999999999999999999998754 55
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Q 009204 488 DLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGE 523 (540)
Q Consensus 488 D~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~ 523 (540)
+++++++++.++++.||.|..+|.+.+.++...|+.
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~ 160 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 160 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcC
Confidence 589999999999999999999999999999999984
No 197
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.44 E-value=2.3e-06 Score=87.31 Aligned_cols=98 Identities=15% Similarity=0.142 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh---cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH---cCCH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLV---TKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV---RKDL 489 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~---~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~---rGD~ 489 (540)
.+++++|..+|++|++. .++.+++++|.++... .+++++|+++|++|++. +++.++.++|.++... .+|+
T Consensus 92 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~ 167 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDY 167 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 46777777777777764 4677777777766521 56777788888777664 5777777777765431 4577
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009204 490 WAAEETYQQAMAAEPNSSSYASKYASFLWN 519 (540)
Q Consensus 490 EEAee~feKALeLDPdnpeal~NLA~~L~~ 519 (540)
++|+++|++|++. +++.++.++|.++..
T Consensus 168 ~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 195 (490)
T 2xm6_A 168 VMAREWYSKAAEQ--GNVWSCNQLGYMYSR 195 (490)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHhc
Confidence 7888888877765 567777777777776
No 198
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.40 E-value=4.7e-07 Score=73.77 Aligned_cols=59 Identities=10% Similarity=0.083 Sum_probs=52.4
Q ss_pred cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 467 SDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 467 LDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.+|+++.++.++|.+++. .|++++|+++|++|++++|+++.++.++|.++..+|++++|
T Consensus 2 ~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 60 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLK-HDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDA 60 (100)
T ss_dssp ---CCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred CCccCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 489999999999998764 79999999999999999999999999999999999998753
No 199
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.37 E-value=2.5e-06 Score=89.01 Aligned_cols=120 Identities=11% Similarity=-0.057 Sum_probs=82.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH--hcC--C---HHHHHHHHH--HHHHcCCCCHHHHHHHHHHHHHHc
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHL--VTK--D---YDRAEECFK--RAIQSDPPDAEALSQYADFLWLVR 486 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~--~~G--D---~deAEe~fe--RALeLDPndAeAl~NLA~~L~~~r 486 (540)
...+.+|..+|++|++++|+++.++..++.++.. ..+ . .......++ .++..+|.++.++..++..++ ..
T Consensus 212 ~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l-~~ 290 (372)
T 3ly7_A 212 DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSAL-VK 290 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHH-hC
Confidence 3567899999999999999999988877665421 111 1 111111222 233567888888888776554 35
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc-------ccccCCCCccccC
Q 009204 487 KDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE-------TCFPLSSSQDDYN 537 (540)
Q Consensus 487 GD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~E-------t~~pl~~~~~~~~ 537 (540)
|++++|+.++++|++++|+ ..++.-+|.++...|+.+ +|+-++|..++|.
T Consensus 291 gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~ 347 (372)
T 3ly7_A 291 GKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLY 347 (372)
T ss_dssp TCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHH
Confidence 8888888888888888864 667777888888888854 5677777766653
No 200
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.29 E-value=2.3e-06 Score=85.90 Aligned_cols=108 Identities=11% Similarity=-0.079 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC--HHHHHHHHHHHHHHcCCHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD--AEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd--AeAl~NLA~~L~~~rGD~EEAe 493 (540)
.|+|++|.++|+.++..+|++. +++.+|.+++. .+++++|+.+|+++++..++. ..+++++|.++. ..|++++|+
T Consensus 115 ~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~-~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~-~LG~~~eAl 191 (282)
T 4f3v_A 115 QGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGA-AERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAA-NLALFTEAE 191 (282)
T ss_dssp HTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHH-TTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHH-HTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHH-cCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHH-HCCCHHHHH
Confidence 4999999999999999999998 99999998884 999999999999998864222 458999998765 589999999
Q ss_pred HHHHHHHHhC--CC-CHHHHHHHHHHHHHcCCCccc
Q 009204 494 ETYQQAMAAE--PN-SSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 494 e~feKALeLD--Pd-npeal~NLA~~L~~~GR~Et~ 526 (540)
.+|++++... |. .+++++++|.+|..+|+.++|
T Consensus 192 ~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA 227 (282)
T 4f3v_A 192 RRLTEANDSPAGEACARAIAWYLAMARRSQGNESAA 227 (282)
T ss_dssp HHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHH
Confidence 9999999654 66 778999999999999998753
No 201
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.13 E-value=6e-06 Score=84.10 Aligned_cols=93 Identities=11% Similarity=-0.011 Sum_probs=75.4
Q ss_pred cCCCCHHHHHHHHHHHHHh----cC------CHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHH----cCCHHHHHHH
Q 009204 432 EEPNNPLLLLNYAQFLHLV----TK------DYDRAEECFKRAIQSDPP--DAEALSQYADFLWLV----RKDLWAAEET 495 (540)
Q Consensus 432 lDP~Np~allNLA~~L~~~----~G------D~deAEe~feRALeLDPn--dAeAl~NLA~~L~~~----rGD~EEAee~ 495 (540)
.+|+++++++-.|...... .| ...+|+..++|||++||+ +..+|..+|.+|... .|+.++|+++
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 3677888777766654311 23 367899999999999999 677999999876542 4999999999
Q ss_pred HHHHHHhCCCC-HHHHHHHHHHHHHc-CCCc
Q 009204 496 YQQAMAAEPNS-SSYASKYASFLWNT-GGEE 524 (540)
Q Consensus 496 feKALeLDPdn-peal~NLA~~L~~~-GR~E 524 (540)
|+||++++|+. ...++.||.+|... |+++
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 99999999975 99999999999885 7765
No 202
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.12 E-value=9e-06 Score=67.67 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEE-------PNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYAD 480 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalD-------P~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~ 480 (540)
+.++|.+|..+|++|++.. +..+.++.++|.+++ ..|++++|..++++|++++|++..++.|++.
T Consensus 17 ~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~-~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 17 TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVY-QQGDLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHH-HccCHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 3489999999999999963 356789999999999 5999999999999999999999999999884
No 203
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.12 E-value=3.5e-06 Score=89.82 Aligned_cols=103 Identities=10% Similarity=-0.018 Sum_probs=81.4
Q ss_pred CHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHc-----CCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHHc
Q 009204 396 DHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAE-----EPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQS 467 (540)
Q Consensus 396 D~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALal-----DP~Np~---allNLA~~L~~~~GD~deAEe~feRALeL 467 (540)
.|+++..+.+.+.+. ..+|+|++|+.+|+++|+. -|++|. .++|+|.+|. .+|++++|+.+|++|+++
T Consensus 347 Hp~~a~~~~nLa~~y---~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~-~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 347 NLYVLRLLSIASEVL---SYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNW-HAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp SHHHHHHHHHHHHHH---HHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH
Confidence 567777776665553 3569999999999999986 566665 6889999988 499999999999999985
Q ss_pred -----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 009204 468 -----DPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMAAE 503 (540)
Q Consensus 468 -----DPndAe---Al~NLA~~L~~~rGD~EEAee~feKALeLD 503 (540)
-|+++. .+.+++..+.+ .+.+++|+..|++|.+..
T Consensus 423 ~~~~lG~~Hp~~~~~~~~l~~~~~e-~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 423 LLVTHGPSHPITKDLEAMRMQTEME-LRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHTCTTSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 577765 45566666544 567999999999998755
No 204
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.91 E-value=1.3e-05 Score=78.50 Aligned_cols=109 Identities=12% Similarity=0.079 Sum_probs=84.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH-----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHH-----
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL-----------------LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAE----- 473 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~-----------------allNLA~~L~~~~GD~deAEe~feRALeLDPndAe----- 473 (540)
.|+|++|+..|+++++.+|.... ++.++|.+|. ..|++++|.++|++++.+.+....
T Consensus 17 ~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~-~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 95 (434)
T 4b4t_Q 17 EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYV-TMGAKDKLREFIPHSTEYMMQFAKSKTVK 95 (434)
T ss_dssp HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHTHHHHHTSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHccchHHHH
Confidence 38899999999999999887643 5788999888 499999999999999987665433
Q ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCCccc
Q 009204 474 -ALSQYADFLWLVRKDLWAAEETYQQAMAAEP------NSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 474 -Al~NLA~~L~~~rGD~EEAee~feKALeLDP------dnpeal~NLA~~L~~~GR~Et~ 526 (540)
++.+++.++ ...|++++|+.++++++...+ ..+.++.++|.++...|++++|
T Consensus 96 ~~~~~l~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 154 (434)
T 4b4t_Q 96 VLKTLIEKFE-QVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDS 154 (434)
T ss_dssp HHHHHHHHHC-SCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHH
Confidence 344455543 346889999999999988633 3356788999999999997653
No 205
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.90 E-value=1.2e-05 Score=67.04 Aligned_cols=55 Identities=18% Similarity=0.170 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA 472 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA 472 (540)
...++|..++++||++||+++.++..+|..++. .|+|++|+.+|+++++.+|.++
T Consensus 23 ~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~-~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 23 AMTDEVSLLLEQALQLEPYNEAALSLIANDHFI-SFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH-TTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCc
Confidence 447999999999999999999999999999995 9999999999999999999954
No 206
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.85 E-value=1.2e-05 Score=84.45 Aligned_cols=78 Identities=10% Similarity=-0.057 Sum_probs=65.0
Q ss_pred hcCCHHHHHHHHHHHHHc-----CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHH
Q 009204 450 VTKDYDRAEECFKRAIQS-----DPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMAA-----EPNSSS---YASKY 513 (540)
Q Consensus 450 ~~GD~deAEe~feRALeL-----DPndAe---Al~NLA~~L~~~rGD~EEAee~feKALeL-----DPdnpe---al~NL 513 (540)
..|+|++|+.+|+++|++ .|+++. .++|+|.+|.. +|+|++|+.++++++++ -|++|+ .+.|+
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~-~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLY-MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 478999999999999994 566654 68899988764 79999999999999985 456665 58999
Q ss_pred HHHHHHcCCCccccc
Q 009204 514 ASFLWNTGGEETCFP 528 (540)
Q Consensus 514 A~~L~~~GR~Et~~p 528 (540)
|.+|+.+|++++|-+
T Consensus 389 a~~~~~qg~~~eA~~ 403 (433)
T 3qww_A 389 GRLYMGLENKAAGEK 403 (433)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHhccCHHHHHH
Confidence 999999999987543
No 207
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.80 E-value=6e-05 Score=83.51 Aligned_cols=104 Identities=13% Similarity=0.092 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHH-HHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAE-ECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQ 497 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAE-e~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~fe 497 (540)
.++....|++||...|.++.+|..||.++.. .|+.++|. +.|++|+...|.+...+..|+.+.. ..|++++|...|+
T Consensus 325 ~~Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~-~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee-~~~~~e~aR~iye 402 (679)
T 4e6h_A 325 KARMTYVYMQAAQHVCFAPEIWFNMANYQGE-KNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYE-LNTKIPEIETTIL 402 (679)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH-HSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH-HTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HhCCHHHHHHHHH
Confidence 3566789999999999999999999999884 89999996 9999999999999999999998764 5789999999999
Q ss_pred HHHHh-----------CCC-----------CHHHHHHHHHHHHHcCCCc
Q 009204 498 QAMAA-----------EPN-----------SSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 498 KALeL-----------DPd-----------npeal~NLA~~L~~~GR~E 524 (540)
+++.. .|. .+.+|..|+.+..+.|+.+
T Consensus 403 k~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~ 451 (679)
T 4e6h_A 403 SCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLA 451 (679)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHH
Confidence 99985 253 4568999999998888765
No 208
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.75 E-value=7.1e-05 Score=73.19 Aligned_cols=111 Identities=8% Similarity=-0.008 Sum_probs=88.8
Q ss_pred CCCCCHHHHHHHHHHHHHcC------CCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc------CCCCHHHHHHHHHH
Q 009204 414 DDYMDYFRTDLLYQMGVAEE------PNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS------DPPDAEALSQYADF 481 (540)
Q Consensus 414 d~~Gd~eeAe~lYqkALalD------P~Np~allNLA~~L~~~~GD~deAEe~feRALeL------DPndAeAl~NLA~~ 481 (540)
...|++++|..+|++++... +....++.++|.++.. .|++++|..++++++.. .+...+++.+.+.+
T Consensus 106 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (434)
T 4b4t_Q 106 QVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQ-KKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKV 184 (434)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH-ccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 34589999999999998863 3346788999999885 99999999999999986 45557789999987
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCC---CC----HHHHHHHHHHHHHcCCCccc
Q 009204 482 LWLVRKDLWAAEETYQQAMAAEP---NS----SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 482 L~~~rGD~EEAee~feKALeLDP---dn----peal~NLA~~L~~~GR~Et~ 526 (540)
+. ..|++++|..+|++|+...+ +. ..++..+|.++...|+++++
T Consensus 185 ~~-~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A 235 (434)
T 4b4t_Q 185 YH-KLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTA 235 (434)
T ss_dssp HH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHH
T ss_pred HH-HhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHH
Confidence 76 47999999999999998743 33 24567777777788887653
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.71 E-value=0.0001 Score=76.88 Aligned_cols=101 Identities=21% Similarity=0.094 Sum_probs=66.2
Q ss_pred HHHHHHcCCCCHHHHHHH--HHHHHH--hcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH--cC-----CHHHHHH
Q 009204 426 YQMGVAEEPNNPLLLLNY--AQFLHL--VTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLV--RK-----DLWAAEE 494 (540)
Q Consensus 426 YqkALalDP~Np~allNL--A~~L~~--~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~--rG-----D~EEAee 494 (540)
.+++...-|.++.+|-.| |..+.. ...++.+|..+|++||++||+++.++..++..+... .+ ..+....
T Consensus 183 ~~r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~ 262 (372)
T 3ly7_A 183 QETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNT 262 (372)
T ss_dssp HHHHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHH
Confidence 344556677777665443 222221 134568999999999999999999999877765321 11 1111111
Q ss_pred HHH--HHHHhCCCCHHHHHHHHHHHHHcCCCccc
Q 009204 495 TYQ--QAMAAEPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 495 ~fe--KALeLDPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
.++ .++.++|.++.++..+|..++..|+++++
T Consensus 263 a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A 296 (372)
T 3ly7_A 263 EIDNIVTLPELNNLSIIYQIKAVSALVKGKTDES 296 (372)
T ss_dssp HHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhcccCCcCHHHHHHHHHHHHhCCCHHHH
Confidence 222 23356899999999999999988998753
No 210
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.67 E-value=0.00011 Score=74.82 Aligned_cols=107 Identities=11% Similarity=0.054 Sum_probs=84.8
Q ss_pred CCCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCC----CHHHHHHHH--HHHHHH-c
Q 009204 416 YMDYFRTDLLYQMGVAEEP--NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPP----DAEALSQYA--DFLWLV-R 486 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP--~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPn----dAeAl~NLA--~~L~~~-r 486 (540)
.|++++|.+.+.++|..+| ++.+++.-.++++. .+|+.++|.+.+++..+++|+ +-.++.+++ ++.... .
T Consensus 113 ~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L-~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~ 191 (310)
T 3mv2_B 113 LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL-LNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNK 191 (310)
T ss_dssp HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH-HCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCC
Confidence 4999999999999999997 88899988899888 599999999999999999994 233344454 333322 2
Q ss_pred CCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCCccc
Q 009204 487 KDLWAAEETYQQAMAAEPN--SSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 487 GD~EEAee~feKALeLDPd--npeal~NLA~~L~~~GR~Et~ 526 (540)
+++.+|..+|+++....|+ .+..+++ ++.++|++++|
T Consensus 192 ~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eA 230 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEA 230 (310)
T ss_dssp STTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHH
Confidence 3899999999999888887 4556666 78889998753
No 211
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.64 E-value=0.00021 Score=66.20 Aligned_cols=101 Identities=12% Similarity=0.093 Sum_probs=74.7
Q ss_pred CChHHHHHHHHHHHHHhhchhhhhhccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcC-C-CCHHHHHHHHH
Q 009204 368 MNKEELDLWNSVLDEALRIQEESEYRILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEE-P-NNPLLLLNYAQ 445 (540)
Q Consensus 368 ~~~ee~~LW~~~L~eap~~q~~~~~eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalD-P-~Np~allNLA~ 445 (540)
.++++..-.++...+.-+.. ..+.++.-++. .+-+...+..+.++++.+++..++.+ | ++.++++++|.
T Consensus 9 l~~~~l~~~~~~y~~e~~~~------~~~~~~~F~ya---~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv 79 (152)
T 1pc2_A 9 VSVEDLLKFEKKFQSEKAAG------SVSKSTQFEYA---WCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAV 79 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHTT------CCCHHHHHHHH---HHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHccC------CCcHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHH
Confidence 45566666665555543211 24556655552 22233444567889999999999999 8 67899999999
Q ss_pred HHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 009204 446 FLHLVTKDYDRAEECFKRAIQSDPPDAEALSQY 478 (540)
Q Consensus 446 ~L~~~~GD~deAEe~feRALeLDPndAeAl~NL 478 (540)
.++ +.|+|++|.++++++|+++|+|..+..-.
T Consensus 80 ~~~-kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk 111 (152)
T 1pc2_A 80 GNY-RLKEYEKALKYVRGLLQTEPQNNQAKELE 111 (152)
T ss_dssp HHH-HTSCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHH-HccCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 998 59999999999999999999999887643
No 212
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.63 E-value=0.00011 Score=81.32 Aligned_cols=109 Identities=12% Similarity=0.125 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHHHHc-----------CCC-----------CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc-CCCC
Q 009204 415 DYMDYFRTDLLYQMGVAE-----------EPN-----------NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS-DPPD 471 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal-----------DP~-----------Np~allNLA~~L~~~~GD~deAEe~feRALeL-DPnd 471 (540)
..|++++|...|++++.. .|. .+.+|..|+.+..+ .|+.++|...|.+|++. .+..
T Consensus 390 ~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR-~~~l~~AR~vf~~A~~~~~~~~ 468 (679)
T 4e6h_A 390 LNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKR-IQGLAASRKIFGKCRRLKKLVT 468 (679)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHTGGGSC
T ss_pred HhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhcCCCC
Confidence 348899999999999975 253 45688999988774 88999999999999998 5555
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 472 AEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 472 AeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
..+|...|.+.+...++++.|...|+++++..|+++..|..|+.++...|+.+
T Consensus 469 ~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~ 521 (679)
T 4e6h_A 469 PDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEES 521 (679)
T ss_dssp THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHH
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHH
Confidence 67777777665544466899999999999999999999999999999888864
No 213
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.61 E-value=7.3e-05 Score=78.05 Aligned_cols=77 Identities=12% Similarity=-0.043 Sum_probs=64.6
Q ss_pred hcCCHHHHHHHHHHHHHc-----CCCCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH---HHHHH
Q 009204 450 VTKDYDRAEECFKRAIQS-----DPPDA---EALSQYADFLWLVRKDLWAAEETYQQAMAA-----EPNSSS---YASKY 513 (540)
Q Consensus 450 ~~GD~deAEe~feRALeL-----DPndA---eAl~NLA~~L~~~rGD~EEAee~feKALeL-----DPdnpe---al~NL 513 (540)
.+|++++|+++|+++|++ .|+++ ..+.++|.++.. +|++++|+.++++++++ -|++|. .+.|+
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~-~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nL 377 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACIN-LGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKV 377 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHH
Confidence 489999999999999985 56665 578889988764 79999999999999985 456665 58999
Q ss_pred HHHHHHcCCCcccc
Q 009204 514 ASFLWNTGGEETCF 527 (540)
Q Consensus 514 A~~L~~~GR~Et~~ 527 (540)
|.+|+.+|++++|-
T Consensus 378 a~~~~~~g~~~eA~ 391 (429)
T 3qwp_A 378 GKLQLHQGMFPQAM 391 (429)
T ss_dssp HHHHHHTTCHHHHH
T ss_pred HHHHHhcCCHHHHH
Confidence 99999999998654
No 214
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.55 E-value=0.00023 Score=72.34 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHhhchhhhhh-c-cC--CH--HHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCC----CHHHHH
Q 009204 372 ELDLWNSVLDEALRIQEESEY-R-IL--DH--ETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPN----NPLLLL 441 (540)
Q Consensus 372 e~~LW~~~L~eap~~q~~~~~-e-aL--D~--e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~----Np~all 441 (540)
..-+-..++....+..+++.. . .+ ++ +.+..+...+...+ ..|+.+.|.+.+++..+.+|+ +-.++.
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L---~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~ 178 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVAL---LNNNVSTASTIFDNYTNAIEDTVSGDNEMIL 178 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHH---HTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHH---HCCCHHHHHHHHHHHHhcCccccccchHHHH
Confidence 333444555555555555444 1 22 21 33343333333333 348999999999999999993 223344
Q ss_pred HHHHH--HHHhcC--CHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCC
Q 009204 442 NYAQF--LHLVTK--DYDRAEECFKRAIQSDPP--DAEALSQYADFLWLVRKDLWAAEETYQQAMAA----------EPN 505 (540)
Q Consensus 442 NLA~~--L~~~~G--D~deAEe~feRALeLDPn--dAeAl~NLA~~L~~~rGD~EEAee~feKALeL----------DPd 505 (540)
+++.. .. ..| ++++|..+|+++.+..|+ ....+.+ + +..+|++++|++.+++++++ +|+
T Consensus 179 ~Laea~v~l-~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~-~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~ 253 (310)
T 3mv2_B 179 NLAESYIKF-ATNKETATSNFYYYEELSQTFPTWKTQLGLLN---L-HLQQRNIAEAQGIVELLLSDYYSVEQKENAVLY 253 (310)
T ss_dssp HHHHHHHHH-HHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---H-HHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSS
T ss_pred HHHHHHHHH-HhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---H-HHHcCCHHHHHHHHHHHHHhcccccccccCCCC
Confidence 45433 33 245 999999999999888786 3455555 3 34579999999999988877 599
Q ss_pred CHHHHHHHHHHHHHcCC
Q 009204 506 SSSYASKYASFLWNTGG 522 (540)
Q Consensus 506 npeal~NLA~~L~~~GR 522 (540)
+++++.|+..+...+|+
T Consensus 254 ~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 254 KPTFLANQITLALMQGL 270 (310)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCh
Confidence 99999999999999997
No 215
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.52 E-value=0.00054 Score=61.71 Aligned_cols=92 Identities=13% Similarity=0.068 Sum_probs=77.6
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCH---HHHHHHHHHHHHcC-C-CCHHHHHHHHHHHHHHcCCHHHH
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDY---DRAEECFKRAIQSD-P-PDAEALSQYADFLWLVRKDLWAA 492 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~---deAEe~feRALeLD-P-ndAeAl~NLA~~L~~~rGD~EEA 492 (540)
....++..|.+++..++....+.++||+.|.. .++. .+++.+++..+..+ | ..-+.++.+|..++. .|+|++|
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~-S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yk-lg~Y~~A 93 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVR-TRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYR-LKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTT-SSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH-hhhHHHH
Confidence 45677889999999898999999999998873 5544 45999999999987 5 566788889988775 7899999
Q ss_pred HHHHHHHHHhCCCCHHHHH
Q 009204 493 EETYQQAMAAEPNSSSYAS 511 (540)
Q Consensus 493 ee~feKALeLDPdnpeal~ 511 (540)
.++.+..++.+|+|..+..
T Consensus 94 ~~~~~~lL~~eP~n~QA~~ 112 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNNQAKE 112 (126)
T ss_dssp HHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHH
Confidence 9999999999999988754
No 216
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.39 E-value=0.00042 Score=82.98 Aligned_cols=85 Identities=13% Similarity=0.001 Sum_probs=67.2
Q ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 009204 433 EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASK 512 (540)
Q Consensus 433 DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~N 512 (540)
..+++.+|++||.++. ..|++++|+.+|.+| +|+.+|.+.+.++. ..|++++|+++|+.|++.+++. .+-..
T Consensus 1101 rvn~p~vWsqLAKAql-~~G~~kEAIdsYiKA-----dD~say~eVa~~~~-~lGkyEEAIeyL~mArk~~~e~-~Idt~ 1172 (1630)
T 1xi4_A 1101 RCNEPAVWSQLAKAQL-QKGMVKEAIDSYIKA-----DDPSSYMEVVQAAN-TSGNWEELVKYLQMARKKARES-YVETE 1172 (1630)
T ss_pred hcCCHHHHHHHHHHHH-hCCCHHHHHHHHHhc-----CChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhcccc-cccHH
Confidence 3678899999999888 599999999999887 88999999998764 5799999999999999888542 22234
Q ss_pred HHHHHHHcCCCcc
Q 009204 513 YASFLWNTGGEET 525 (540)
Q Consensus 513 LA~~L~~~GR~Et 525 (540)
+|..|.+++++++
T Consensus 1173 LafaYAKl~rlee 1185 (1630)
T 1xi4_A 1173 LIFALAKTNRLAE 1185 (1630)
T ss_pred HHHHHHhhcCHHH
Confidence 6666666666653
No 217
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.34 E-value=0.0013 Score=78.96 Aligned_cols=95 Identities=16% Similarity=0.095 Sum_probs=70.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-----------------------
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPD----------------------- 471 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPnd----------------------- 471 (540)
+.|++++|...|.+| +|+..|.+.|.++. ..|++++|.++|+.|++.+++.
T Consensus 1117 ~~G~~kEAIdsYiKA-----dD~say~eVa~~~~-~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI 1190 (1630)
T 1xi4_A 1117 QKGMVKEAIDSYIKA-----DDPSSYMEVVQAAN-TSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFI 1190 (1630)
T ss_pred hCCCHHHHHHHHHhc-----CChHHHHHHHHHHH-HcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHH
Confidence 458999999999887 88999999999888 4999999999999988776442
Q ss_pred ----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 472 ----AEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 472 ----AeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
...+.+.|..+. ..|+|++|..+|.+| ..|..+|..|.++|+++
T Consensus 1191 ~~~n~ad~~~iGd~le-~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q 1238 (1630)
T 1xi4_A 1191 NGPNNAHIQQVGDRCY-DEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQ 1238 (1630)
T ss_pred hCCCHHHHHHHHHHHH-hcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHH
Confidence 122334554443 356777777777775 35667777777777765
No 218
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.28 E-value=0.0015 Score=68.77 Aligned_cols=107 Identities=12% Similarity=0.168 Sum_probs=83.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH----------------------------------------HHHhcCCHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQF----------------------------------------LHLVTKDYD 455 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~----------------------------------------L~~~~GD~d 455 (540)
.|+.++|...|++|+.. |.+..++..|+.+ +.+ .++.+
T Consensus 226 ~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r-~~~~~ 303 (493)
T 2uy1_A 226 IGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLK-KRGLE 303 (493)
T ss_dssp TTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHH-HHCHH
T ss_pred cCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHH-cCCHH
Confidence 36778888888888888 8776655555443 332 66789
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 456 RAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 456 eAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+|...|++| ...+....++..+|.+.+...++.+.|...|+++++.-|+++..+..|+.++...|+.+.
T Consensus 304 ~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~ 372 (493)
T 2uy1_A 304 LFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEEN 372 (493)
T ss_dssp HHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHH
Confidence 999999999 543446677877787766656689999999999999999999999999998888887653
No 219
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.18 E-value=0.0032 Score=58.98 Aligned_cols=101 Identities=14% Similarity=0.096 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHcCCC--------CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHH
Q 009204 420 FRTDLLYQMGVAEEPN--------NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 420 eeAe~lYqkALalDP~--------Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EE 491 (540)
++-...|++|++.-|- ...+|..||.+ . ..+|.++|.+.|+.++.++..++.+|..+|.|-.. +|+..+
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~-ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiR-qgnl~k 112 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-K-AIQEPDDARDYFQMARANCKKFAFVHISFAQFELS-QGNVKK 112 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-H-HHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-H-HhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cccHHH
Confidence 6778899999998664 44578889976 4 37999999999999999999999999999998765 789999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCc
Q 009204 492 AEETYQQAMAAEPNSSSYASKYASFLWNTGGEE 524 (540)
Q Consensus 492 Aee~feKALeLDPdnpeal~NLA~~L~~~GR~E 524 (540)
|...+.+|+.+.|...+.+ ..|.--.+.|...
T Consensus 113 ARkILg~AiG~~~k~~~~l-e~a~~nl~~~~~~ 144 (161)
T 4h7y_A 113 SKQLLQKAVERGAVPLEML-EIALRNLNLQKKQ 144 (161)
T ss_dssp HHHHHHHHHHTTCBCHHHH-HHHHHHHHTTCSC
T ss_pred HHHHHHHHhccCCCcHHHH-HHHHHhhhcCCCe
Confidence 9999999999999987754 3455455666654
No 220
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.08 E-value=0.003 Score=66.60 Aligned_cols=100 Identities=11% Similarity=0.059 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH-----------------
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADF----------------- 481 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~----------------- 481 (540)
.+++...|+++|...|..+.+|..|+.++. ..|+.++|...|++|+.. |.+...+..|+.+
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~-~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~ 272 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLI-GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMG 272 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhh
Confidence 456788999999999999999999999988 499999999999999999 9987666655543
Q ss_pred -----------------------HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC
Q 009204 482 -----------------------LWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGG 522 (540)
Q Consensus 482 -----------------------L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR 522 (540)
+.. .++.++|...|++| ...+.....|...|.+-+..++
T Consensus 273 ~~~~~~~~~~~~~~~lw~~y~~~~~r-~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~ 334 (493)
T 2uy1_A 273 EAESAEKVFSKELDLLRINHLNYVLK-KRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATG 334 (493)
T ss_dssp --------CHHHHHHHHHHHHHHHHH-HHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHC
T ss_pred ccchhhhhcccccHHHHHHHHHHHHH-cCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCC
Confidence 111 34588888899999 4333456677777777666664
No 221
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.95 E-value=0.0015 Score=61.19 Aligned_cols=92 Identities=21% Similarity=0.197 Sum_probs=77.9
Q ss_pred HcCCCCHHHHHHHHHHHHHhcCCH------HHHHHHHHHHHHcCCCC--------HHHHHHHHHHHHHHcCCHHHHHHHH
Q 009204 431 AEEPNNPLLLLNYAQFLHLVTKDY------DRAEECFKRAIQSDPPD--------AEALSQYADFLWLVRKDLWAAEETY 496 (540)
Q Consensus 431 alDP~Np~allNLA~~L~~~~GD~------deAEe~feRALeLDPnd--------AeAl~NLA~~L~~~rGD~EEAee~f 496 (540)
-..|+|++.|.+|...+. ..|+. ++-.+.|+||+..-|.. ...|.+||.+. . .+|.++|.+.|
T Consensus 7 ~~~p~~yd~W~~yl~llE-~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~~-e-i~D~d~aR~vy 83 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLE-KNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAELK-A-IQEPDDARDYF 83 (161)
T ss_dssp ---CCSHHHHHHHHHHHH-HHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHHH-H-HHCGGGCHHHH
T ss_pred eeCCCCHHHHHHHHHHHH-HcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHHH-H-hcCHHHHHHHH
Confidence 458999999999999888 47998 99999999999987763 55788888653 3 47999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 497 QQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 497 eKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+.|+.+....+.+|..+|.|-.++|+.+.
T Consensus 84 ~~a~~~hKkFAKiwi~~AqFEiRqgnl~k 112 (161)
T 4h7y_A 84 QMARANCKKFAFVHISFAQFELSQGNVKK 112 (161)
T ss_dssp HHHHHHCTTBHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHcccHHH
Confidence 99999999999999999999999998764
No 222
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.81 E-value=0.0024 Score=68.13 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=71.0
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|+|++|.+.|++| +++.+|.....+|.. .|+++.|..+... |..+|++.. .+.. ++...|++++|+.+
T Consensus 161 Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~-~~ef~lA~~~~l~-L~~~ad~l~---~lv~-~Yek~G~~eEai~l 229 (449)
T 1b89_A 161 LGEYQAAVDGARKA-----NSTRTWKEVCFACVD-GKEFRLAQMCGLH-IVVHADELE---ELIN-YYQDRGYFEELITM 229 (449)
T ss_dssp TTCHHHHHHHHHHH-----TCHHHHHHHHHHHHH-TTCHHHHHHTTTT-TTTCHHHHH---HHHH-HHHHTTCHHHHHHH
T ss_pred hccHHHHHHHHHHc-----CCchhHHHHHHHHHH-cCcHHHHHHHHHH-HHhCHhhHH---HHHH-HHHHCCCHHHHHHH
Confidence 37788888888887 467777777777774 8888888777775 445555433 3444 34668999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNT 520 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~ 520 (540)
+++++.+++.+...+..+|.++..-
T Consensus 230 Le~aL~le~ah~~~ftel~il~~ky 254 (449)
T 1b89_A 230 LEAALGLERAHMGMFTELAILYSKF 254 (449)
T ss_dssp HHHHTTSTTCCHHHHHHHHHHHHTT
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999887643
No 223
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.74 E-value=0.00022 Score=76.07 Aligned_cols=96 Identities=10% Similarity=0.024 Sum_probs=9.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEET 495 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~ 495 (540)
.|++++|+..|.++ .|+..+...+..+. ..|++++|+.+++.+++..++ +.+...++..+. ..|++++++++
T Consensus 45 ~g~~~eAIdsfika-----~D~~~y~~V~~~ae-~~g~~EeAi~yl~~ark~~~~-~~i~~~Li~~Y~-Klg~l~e~e~f 116 (449)
T 1b89_A 45 KGMVKEAIDSYIKA-----DDPSSYMEVVQAAN-TSGNWEELVKYLQMARKKARE-SYVETELIFALA-KTNRLAELEEF 116 (449)
T ss_dssp ------------------------------------------------------------------------CHHHHTTT
T ss_pred cCCHHHHHHHHHcC-----CCHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHhCcc-chhHHHHHHHHH-HhCCHHHHHHH
Confidence 36667777777553 34556666666655 367777777777777664333 555555555433 35667776666
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 496 YQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 496 feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
++ .|+. .+|.++|..+...|++++
T Consensus 117 ~~-----~pn~-~a~~~IGd~~~~~g~yee 140 (449)
T 1b89_A 117 IN-----GPNN-AHIQQVGDRCYDEKMYDA 140 (449)
T ss_dssp TT-----CC-----------------CTTT
T ss_pred Hc-----CCcH-HHHHHHHHHHHHcCCHHH
Confidence 64 2433 466777777777777665
No 224
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.16 E-value=0.042 Score=55.36 Aligned_cols=63 Identities=19% Similarity=0.245 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQY 478 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NL 478 (540)
+.|..++|+...+..|+.+|.|+.....|.++|+ ..|++++|.+.++.+.+++|+....-..|
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~y 71 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQL 71 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHH
Confidence 3489999999999999999999999999999999 59999999999999999999997654444
No 225
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.97 E-value=0.024 Score=61.03 Aligned_cols=64 Identities=14% Similarity=0.040 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADF 481 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~ 481 (540)
..++.|..+|++|+.++|+++..|+.+|.+.. ..|+.-+|.-+|-|+|.....++.+..|+..+
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~-~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILAS-SKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHH-HTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHh-cccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 34555555555555555555555555555444 25555555555555555555555555555543
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.63 E-value=0.045 Score=50.49 Aligned_cols=92 Identities=11% Similarity=-0.064 Sum_probs=69.5
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLV--TKDYDRAEECFKRAIQSDPP-DAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L~~~--~GD~deAEe~feRALeLDPn-dAeAl~NLA~~L~~~rGD~EEAee 494 (540)
+....++.|.+-+. +.-.+.+.++||+.|... ..+..+++.+++..+..+|. .-+-++.+|..++. .|+|++|.+
T Consensus 21 eL~~lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~yk-l~~Y~~Ar~ 98 (144)
T 1y8m_A 21 QLEILRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKR 98 (144)
T ss_dssp HHHHHHHHHHHTTS-TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHT-TTCHHHHHH
T ss_pred HHHHHHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHH-hhhHHHHHH
Confidence 34555556655422 345789999999988742 23456899999999999885 45567777877764 789999999
Q ss_pred HHHHHHHhCCCCHHHHH
Q 009204 495 TYQQAMAAEPNSSSYAS 511 (540)
Q Consensus 495 ~feKALeLDPdnpeal~ 511 (540)
+.+..++.+|+|..+..
T Consensus 99 y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 99 YVDTLFEHERNNKQVGA 115 (144)
T ss_dssp HHHHHHHTCCCCHHHHH
T ss_pred HHHHHHhcCCCcHHHHH
Confidence 99999999999988754
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.53 E-value=0.035 Score=52.32 Aligned_cols=99 Identities=20% Similarity=0.144 Sum_probs=68.5
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHH---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHcC---C--------------
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPL---------LLLNYAQFLHLVTKDYDRAEECFKRAIQSD---P-------------- 469 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~---------allNLA~~L~~~~GD~deAEe~feRALeLD---P-------------- 469 (540)
.+.|+.|+..+..++....++++ ++..+|..++. +|+|.+|+.+|++||++. +
T Consensus 33 ~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss 111 (167)
T 3ffl_A 33 AGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSAS 111 (167)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC---------------
T ss_pred hhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCC
Confidence 47899999999987776544443 77889999994 999999999999998741 1
Q ss_pred --------CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 009204 470 --------PDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFL 517 (540)
Q Consensus 470 --------ndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L 517 (540)
.+.+..+..|..+. ..+++++|+..++. |...-..+.+-..+|.+|
T Consensus 112 ~p~s~~~~~e~Elkykia~C~~-~l~~~~~Ai~~Le~-Ip~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 112 TPQSQCLPSEIEVKYKLAECYT-VLKQDKDAIAILDG-IPSRQRTPKINMLLANLY 165 (167)
T ss_dssp -----CCCCHHHHHHHHHHHHH-HTTCHHHHHHHHHT-SCGGGCCHHHHHHHHHHC
T ss_pred CcccccccchHHHHHHHHHHHH-HHCCHHHHHHHHhc-CCchhcCHHHHHHHHHHh
Confidence 11256677776554 46778888887653 222334455555555543
No 228
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=95.49 E-value=0.052 Score=48.80 Aligned_cols=65 Identities=14% Similarity=0.091 Sum_probs=55.2
Q ss_pred CCCCCCHHHHHHHHHHHHHcC-C-CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 009204 413 PDDYMDYFRTDLLYQMGVAEE-P-NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQY 478 (540)
Q Consensus 413 ~d~~Gd~eeAe~lYqkALalD-P-~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NL 478 (540)
.....+..+++.+++..++.+ | ++-+.++.+|..++ +.|+|++|.++.+..|+++|+|..+..-.
T Consensus 48 S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~y-klg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 48 TRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNY-RLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp SSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 444566778999999999987 6 56688999999999 59999999999999999999999987533
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.47 E-value=0.058 Score=49.23 Aligned_cols=94 Identities=12% Similarity=-0.067 Sum_probs=69.9
Q ss_pred CHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHcCCHHHHHH
Q 009204 418 DYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVT--KDYDRAEECFKRAIQSDPP-DAEALSQYADFLWLVRKDLWAAEE 494 (540)
Q Consensus 418 d~eeAe~lYqkALalDP~Np~allNLA~~L~~~~--GD~deAEe~feRALeLDPn-dAeAl~NLA~~L~~~rGD~EEAee 494 (540)
+....++.|++=+.-.| .+.+.++||+.|.... .+..+++.+++..++.+|. .-+-++.+|..++. .|+|++|.+
T Consensus 22 eL~~l~~qy~~E~~~~v-s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yk-lgdY~~Ar~ 99 (134)
T 3o48_A 22 QLEILRQQVVSEGGPTA-TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYK-LGEYSMAKR 99 (134)
T ss_dssp HHHHHHHHHHHTTGGGS-CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH-HTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCC-ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHH-hhhHHHHHH
Confidence 44555666665443234 5789999999886422 2456799999999998884 46677888887775 689999999
Q ss_pred HHHHHHHhCCCCHHHHHHH
Q 009204 495 TYQQAMAAEPNSSSYASKY 513 (540)
Q Consensus 495 ~feKALeLDPdnpeal~NL 513 (540)
+.++.++.+|+|..+..=.
T Consensus 100 y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 100 YVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp HHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHhhCCCCHHHHHHH
Confidence 9999999999998875433
No 230
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=95.19 E-value=0.38 Score=50.92 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=83.9
Q ss_pred CCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHcCCHHH
Q 009204 416 YMDYFRTDLLYQMGVAE--EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS--DPPDAEALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALal--DP~Np~allNLA~~L~~~~GD~deAEe~feRALeL--DPndAeAl~NLA~~L~~~rGD~EE 491 (540)
.++.++|..+|++..+. .| |...|..+-..|. ..|+.++|+++|++..+. .| +...|+.+-..+. ..|+.++
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~P-d~~tyn~lI~~~~-~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~-~~g~~~~ 158 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVP-NEATFTNGARLAV-AKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFC-RKGDADK 158 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH-HTTCHHH
T ss_pred cchHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHH-HCCCHHH
Confidence 45689999999988775 45 6778888888888 599999999999998875 45 5556666655554 4799999
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCCcccc
Q 009204 492 AEETYQQAMAA--EPNSSSYASKYASFLWNTGGEETCF 527 (540)
Q Consensus 492 Aee~feKALeL--DPdnpeal~NLA~~L~~~GR~Et~~ 527 (540)
|.+.|++..+. .| +...+..+-.++.+.|+.++++
T Consensus 159 A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~~d~A~ 195 (501)
T 4g26_A 159 AYEVDAHMVESEVVP-EEPELAALLKVSMDTKNADKVY 195 (501)
T ss_dssp HHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhcCCCC-CHHHHHHHHHHHhhCCCHHHHH
Confidence 99999999885 34 4567788888999999987654
No 231
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=93.86 E-value=0.13 Score=48.52 Aligned_cols=81 Identities=14% Similarity=0.047 Sum_probs=62.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHcCCCCHH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCC-----
Q 009204 444 AQFLHLVTKDYDRAEECFKRAIQSDPPDAE---------ALSQYADFLWLVRKDLWAAEETYQQAMAAE---PNS----- 506 (540)
Q Consensus 444 A~~L~~~~GD~deAEe~feRALeLDPndAe---------Al~NLA~~L~~~rGD~EEAee~feKALeLD---Pdn----- 506 (540)
...++. .|.|+-|+-....++.+..++++ ++..+|..++. .++|.+|+.+|++|+++. +.+
T Consensus 27 ik~L~d-~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~-~~eyrrA~~~y~qALq~~k~l~k~~s~~~ 104 (167)
T 3ffl_A 27 VRDMAA-AGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFH-DKEYRNAVSKYTMALQQKKALSKTSKVRP 104 (167)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHH-hhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 344664 89999999999998887654444 77889998886 688999999999997741 211
Q ss_pred -----------------HHHHHHHHHHHHHcCCCccc
Q 009204 507 -----------------SSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 507 -----------------peal~NLA~~L~~~GR~Et~ 526 (540)
.+..+..|.++..+|+.++|
T Consensus 105 ~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 105 STGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 26889999999999998753
No 232
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.74 E-value=0.15 Score=54.94 Aligned_cols=80 Identities=15% Similarity=0.166 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 009204 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLW 518 (540)
Q Consensus 439 allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~ 518 (540)
.+..+|.+.. +...++.|..+|++|+.++|++...++.+|.+. ...|+.-+|+-+|-|++......+.+..|+..++-
T Consensus 154 ~l~~LGDL~R-Y~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla-~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIAR-YRNQTSQAESYYRHAAQLVPSNGQPYNQLAILA-SSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHH-HHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHH-HHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHH-hcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 6678899766 589999999999999999999999999999865 45789999999999999998889999999999886
Q ss_pred Hc
Q 009204 519 NT 520 (540)
Q Consensus 519 ~~ 520 (540)
..
T Consensus 232 ~~ 233 (497)
T 1ya0_A 232 KA 233 (497)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 233
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=93.71 E-value=0.22 Score=56.30 Aligned_cols=105 Identities=15% Similarity=0.029 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHH--HHHhcCCHHHHHHHHHHHHH--------cCCCCH----------HHHHHH
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQF--LHLVTKDYDRAEECFKRAIQ--------SDPPDA----------EALSQY 478 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~--L~~~~GD~deAEe~feRALe--------LDPndA----------eAl~NL 478 (540)
++.|..++++..+.+|.+...+.. +.+ +.....+--+|.....++|+ +.+.+. ..+.--
T Consensus 265 ~~~a~~~le~L~~~~p~~~~~~~~-~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Q 343 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDIYYKT-AMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQ 343 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhHHHHH-HHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHH
Confidence 578999999999999977543322 221 11112234467777877774 234443 234444
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCcc
Q 009204 479 ADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASFLWNTGGEET 525 (540)
Q Consensus 479 A~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~L~~~GR~Et 525 (540)
+.||.. +|+++-|+++-++|+...|..-..|+.||.+|..+|++|.
T Consensus 344 a~FLl~-K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ 389 (754)
T 4gns_B 344 TNFLLN-RGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEK 389 (754)
T ss_dssp HHHHHH-TTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhc-cCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHH
Confidence 666654 8999999999999999999999999999999999999883
No 234
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=93.58 E-value=0.19 Score=46.36 Aligned_cols=101 Identities=8% Similarity=-0.022 Sum_probs=73.4
Q ss_pred CCCChHHHHHHHHHHHHHhhchhhhhhccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCC-CHHHHHHHH
Q 009204 366 FPMNKEELDLWNSVLDEALRIQEESEYRILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPN-NPLLLLNYA 444 (540)
Q Consensus 366 ~~~~~ee~~LW~~~L~eap~~q~~~~~eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~-Np~allNLA 444 (540)
..++.++....++-..+-.. ....+++.-++. .+-+......+..+++.+++..+..+|. .-+.++.+|
T Consensus 15 ~~l~~eeL~~lr~qY~~E~~-------~~vs~~t~F~YA---w~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLA 84 (144)
T 1y8m_A 15 EPLYPQQLEILRQQVVSEGG-------PTATIQSRFNYA---WGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLT 84 (144)
T ss_dssp CCCCHHHHHHHHHHHHHTTS-------TTSCHHHHHHHH---HHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcc-------CCCcHHHHHHHH---HHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHH
Confidence 44677888877766554211 134445544441 2222344456778999999999999995 457888899
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHH
Q 009204 445 QFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQ 477 (540)
Q Consensus 445 ~~L~~~~GD~deAEe~feRALeLDPndAeAl~N 477 (540)
..++ +.|+|++|.++.+..|+++|+|..+..-
T Consensus 85 vg~y-kl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 85 IGCY-KLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp HHHH-TTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHH-HhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 9889 6999999999999999999999988653
No 235
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=93.57 E-value=0.11 Score=47.49 Aligned_cols=102 Identities=8% Similarity=-0.038 Sum_probs=73.8
Q ss_pred CCCChHHHHHHHHHHHHHhhchhhhhhccCCHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHcCCC-CHHHHHHHH
Q 009204 366 FPMNKEELDLWNSVLDEALRIQEESEYRILDHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAEEPN-NPLLLLNYA 444 (540)
Q Consensus 366 ~~~~~ee~~LW~~~L~eap~~q~~~~~eaLD~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALalDP~-Np~allNLA 444 (540)
...+.+++...+....+-- ...+.+++.-.+. .+-+...+..+..+++.+++..++.+|. .-+.++.+|
T Consensus 16 ~~~~~eeL~~l~~qy~~E~-------~~~vs~qt~F~yA---w~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLA 85 (134)
T 3o48_A 16 EPLYPQQLEILRQQVVSEG-------GPTATIQSRFNYA---WGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLT 85 (134)
T ss_dssp CCCCHHHHHHHHHHHHHTT-------GGGSCHHHHHHHH---HHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHh-------CCCCChhhHHHHH---HHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHH
Confidence 4567788887776654321 1234445544442 1222244456778999999999999995 467888899
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHH
Q 009204 445 QFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQY 478 (540)
Q Consensus 445 ~~L~~~~GD~deAEe~feRALeLDPndAeAl~NL 478 (540)
..++ +.|+|++|.++.++.|+++|+|..|..-.
T Consensus 86 vg~y-klgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 86 IGCY-KLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp HHHH-HHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHH-HhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 9889 59999999999999999999999987533
No 236
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.33 E-value=0.77 Score=48.68 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH--------HHcCCCCHHHHHHHHH--------
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRA--------IQSDPPDAEALSQYAD-------- 480 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRA--------LeLDPndAeAl~NLA~-------- 480 (540)
|++++|.++. ..-+++..|.++|..+. ..++++.|+++|.++ |....++.+.+..++.
T Consensus 666 ~~~~~A~~~~-----~~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~ 739 (814)
T 3mkq_A 666 GQLTLARDLL-----TDESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKF 739 (814)
T ss_dssp TCHHHHHHHH-----TTCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHH-----HhhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCch
Confidence 5666666553 34567899999999888 599999999999986 2222444444333332
Q ss_pred ----HHHHHcCCHHHHHHHHHH------HHHh----CCCC---HHHHHHHHHHHHHcCCCcc
Q 009204 481 ----FLWLVRKDLWAAEETYQQ------AMAA----EPNS---SSYASKYASFLWNTGGEET 525 (540)
Q Consensus 481 ----~L~~~rGD~EEAee~feK------ALeL----DPdn---peal~NLA~~L~~~GR~Et 525 (540)
.++...|++++|+++|.+ |+.+ .|.. +.+...|+.-|...|+++.
T Consensus 740 ~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~~~~~i~~~~~~~~~~L~~~~~~~~ 801 (814)
T 3mkq_A 740 NLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGDNEVNDIVTKWKENLILNGKNTV 801 (814)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHcCChHHHHHHHHHhCCChHHHHHHHHHHHHHHHhccchhH
Confidence 223335778888877654 3332 3433 4667788888888887543
No 237
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.37 E-value=1.4 Score=44.97 Aligned_cols=61 Identities=8% Similarity=-0.040 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 439 allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
+...++..+. ..|++++|+..+++++..+|-+-.++..+-.+|+ ..|+..+|++.|+++.+
T Consensus 173 a~~~~~~~~l-~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 173 AHTAKAEAEI-ACGRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHH-HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 3445666666 4999999999999999999999999998888776 47999999999998765
No 238
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=91.33 E-value=0.77 Score=46.25 Aligned_cols=66 Identities=24% Similarity=0.295 Sum_probs=57.8
Q ss_pred hcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 009204 450 VTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSSYASKYASF 516 (540)
Q Consensus 450 ~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpeal~NLA~~ 516 (540)
..|++++|++.....|+.+|.|+.....|..+|. ..|++++|.+.++-+.+++|+.......|-.+
T Consensus 9 ~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLc-v~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 9 SEGQLQQALELLIEAIKASPKDASLRSSFIELLC-IDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp TTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 4899999999999999999999999888888765 57999999999999999999987765555444
No 239
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.06 E-value=3.2 Score=43.84 Aligned_cols=108 Identities=15% Similarity=0.082 Sum_probs=80.3
Q ss_pred CCCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHH--------hcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAE--EPNNPLLLLNYAQFLHL--------VTKDYDRAEECFKRAIQS--DPPDAEALSQYADFL 482 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal--DP~Np~allNLA~~L~~--------~~GD~deAEe~feRALeL--DPndAeAl~NLA~~L 482 (540)
+.|++++|..+|++..+. .| |...|+.+-.+|.. ..++.++|.+.|++-.+. .| |...|+.+-..+
T Consensus 38 k~G~~~~A~~lf~~M~~~Gv~p-d~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~P-d~~tyn~lI~~~ 115 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNGVQL-SQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVP-NEATFTNGARLA 115 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcCCCC-CHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCC-CHHHHHHHHHHH
Confidence 459999999999999885 46 56666655544441 123478999999988775 34 556677776666
Q ss_pred HHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCCccc
Q 009204 483 WLVRKDLWAAEETYQQAMAA--EPNSSSYASKYASFLWNTGGEETC 526 (540)
Q Consensus 483 ~~~rGD~EEAee~feKALeL--DPdnpeal~NLA~~L~~~GR~Et~ 526 (540)
. ..|++++|+++|++..+. .| +...+..+-..+.+.|+.++|
T Consensus 116 ~-~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A 159 (501)
T 4g26_A 116 V-AKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKA 159 (501)
T ss_dssp H-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHH
T ss_pred H-hcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHH
Confidence 5 479999999999998875 34 467778888889999997754
No 240
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.95 E-value=2.8 Score=48.69 Aligned_cols=98 Identities=13% Similarity=0.026 Sum_probs=71.7
Q ss_pred HHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH---cC--------------------CCCHHHHHHHHHHHHHH
Q 009204 429 GVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ---SD--------------------PPDAEALSQYADFLWLV 485 (540)
Q Consensus 429 ALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALe---LD--------------------PndAeAl~NLA~~L~~~ 485 (540)
.+..-|.++..-+-+|.++. ..|++++|.++|++|-. .+ ..-+..|.+.. .+++.
T Consensus 834 l~~~~~~~~~~~yl~g~~~L-~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~-~LFe~ 911 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLS-KKLFE 911 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHH-HHHHH
T ss_pred HhhhccCCcHHHHHHHHHHH-hcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHH-HHHHH
Confidence 44556788877788899888 49999999999999732 11 11122333333 35667
Q ss_pred cCCHHHHHHHHHHHHHhCC-CCHH----HHHHHHHHHHHcCCCccccc
Q 009204 486 RKDLWAAEETYQQAMAAEP-NSSS----YASKYASFLWNTGGEETCFP 528 (540)
Q Consensus 486 rGD~EEAee~feKALeLDP-dnpe----al~NLA~~L~~~GR~Et~~p 528 (540)
.+-++.+++.-+.||+..+ ++.. .|.++-..+..+|++++||-
T Consensus 912 ~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~ 959 (1139)
T 4fhn_B 912 ESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHV 959 (1139)
T ss_dssp TSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGH
T ss_pred cCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHH
Confidence 8899999999999999765 4432 67888888999999998773
No 241
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=85.71 E-value=7.5 Score=36.63 Aligned_cols=42 Identities=10% Similarity=-0.133 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRA 464 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRA 464 (540)
|+++.|....++. ++...|..+|.... ..|+++-|+++|.++
T Consensus 19 g~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 19 GNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQ 60 (177)
T ss_dssp TCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHh
Confidence 8899888876654 67889999999888 499999999999885
No 242
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=85.57 E-value=1.9 Score=48.74 Aligned_cols=55 Identities=15% Similarity=0.038 Sum_probs=47.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 009204 443 YAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQA 499 (540)
Q Consensus 443 LA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKA 499 (540)
=+.||. ..|+++-|+++.++|+.+.|.+-..|..|+.+|.. .||++.|+-.+.-.
T Consensus 343 Qa~FLl-~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~-l~d~e~ALLtLNSc 397 (754)
T 4gns_B 343 QTNFLL-NRGDYELALGVSNTSTELALDSFESWYNLARCHIK-KEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH-TTCHHHHHHHHHHS
T ss_pred HHHHHh-ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHH-hccHHHHHHHHhcC
Confidence 366777 59999999999999999999999999999998765 79999998765544
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.33 E-value=4.7 Score=42.68 Aligned_cols=69 Identities=16% Similarity=0.055 Sum_probs=48.5
Q ss_pred hcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHHHHHHHHcC
Q 009204 450 VTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQA--------MAAEPNSSSYASKYASFLWNTG 521 (540)
Q Consensus 450 ~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKA--------LeLDPdnpeal~NLA~~L~~~G 521 (540)
..|++++|.++.+ .-++...|.++|..+. ..++++.|+++|.++ +.....+.+.+..++......|
T Consensus 664 ~~~~~~~A~~~~~-----~~~~~~~W~~la~~al-~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 664 KVGQLTLARDLLT-----DESAEMKWRALGDASL-QRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHTCHHHHHHHHT-----TCCCHHHHHHHHHHHH-HTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHH-----hhCcHhHHHHHHHHHH-HcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3788888888754 3467889999999765 578999999999986 2223555665556655555555
Q ss_pred CCc
Q 009204 522 GEE 524 (540)
Q Consensus 522 R~E 524 (540)
+++
T Consensus 738 ~~~ 740 (814)
T 3mkq_A 738 KFN 740 (814)
T ss_dssp CHH
T ss_pred chH
Confidence 544
No 244
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=80.15 E-value=9.6 Score=36.96 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=51.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH-----------------cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 009204 443 YAQFLHLVTKDYDRAEECFKRAIQ-----------------SDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPN 505 (540)
Q Consensus 443 LA~~L~~~~GD~deAEe~feRALe-----------------LDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPd 505 (540)
|-.+|+.+.+|+.+|..+++..|+ +||.|-+...++-..+..+.|+.+||+.+|......+|-
T Consensus 67 Yk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~l 146 (242)
T 3kae_A 67 YESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFL 146 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccc
Confidence 333455579999999999999993 357787865555444556789999999999999999987
Q ss_pred CHHH
Q 009204 506 SSSY 509 (540)
Q Consensus 506 npea 509 (540)
.+.+
T Consensus 147 f~~v 150 (242)
T 3kae_A 147 FSPV 150 (242)
T ss_dssp HHHH
T ss_pred cchH
Confidence 6654
No 245
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=75.34 E-value=6.1 Score=40.30 Aligned_cols=50 Identities=10% Similarity=-0.041 Sum_probs=45.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
.|++.+|...++++++.+|-+..+|..+-.+|+ ..|+..+|++.|++.-+
T Consensus 184 ~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~-~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 184 CGRASAVIAELEALTFEHPYREPLWTQLITAYY-LSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH-TTTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Confidence 489999999999999999999999999988888 59999999999998755
No 246
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=75.11 E-value=12 Score=36.65 Aligned_cols=50 Identities=8% Similarity=-0.078 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHHc-----CCC---CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAE-----EPN---NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 417 Gd~eeAe~lYqkALal-----DP~---Np~allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
|+.+.|...|++|+.+ .|. ...+.+|++.|+++..++.++|....++|+.
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3477888888888763 344 3467778888888888888888888888866
No 247
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=71.95 E-value=8.6 Score=37.72 Aligned_cols=47 Identities=26% Similarity=0.344 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 420 FRTDLLYQMGVA-----EEPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 420 eeAe~lYqkALa-----lDP~Np~---allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
++|...|++|+. +.|.||- +.+|++.|+++..++.++|....++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456666666654 4566663 4556777777667777777776666654
No 248
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=70.68 E-value=13 Score=36.48 Aligned_cols=52 Identities=8% Similarity=-0.065 Sum_probs=43.3
Q ss_pred cCCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 009204 451 TKDYDRAEECFKRAIQS-----DPPD---AEALSQYADFLWLVRKDLWAAEETYQQAMAA 502 (540)
Q Consensus 451 ~GD~deAEe~feRALeL-----DPnd---AeAl~NLA~~L~~~rGD~EEAee~feKALeL 502 (540)
.|+.++|...|+.|..+ .|.+ -....|++.|++...++.++|...-++|+..
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~ 197 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKI 197 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 56788999999999874 3444 4566789999999999999999999999764
No 249
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=70.35 E-value=9.7 Score=37.53 Aligned_cols=48 Identities=23% Similarity=0.305 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 419 YFRTDLLYQMGVA-----EEPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 419 ~eeAe~lYqkALa-----lDP~Np~---allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
.+.|...|++|+. +.|.||- +.+|++.||++..++.++|.+..++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567778887764 4677773 5667888888778888888777777654
No 250
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=70.16 E-value=9.7 Score=38.02 Aligned_cols=48 Identities=23% Similarity=0.272 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHH----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 419 YFRTDLLYQMGVA----EEPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 419 ~eeAe~lYqkALa----lDP~Np~---allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
.++|...|++|+. +.|.||- +.+|++.|||+..++.++|.+..++|+.
T Consensus 172 ~e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567777777775 4677763 5667788888778888888777777765
No 251
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=69.09 E-value=11 Score=37.73 Aligned_cols=48 Identities=27% Similarity=0.322 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 419 YFRTDLLYQMGVA-----EEPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 419 ~eeAe~lYqkALa-----lDP~Np~---allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
.++|...|++|+. +.|.||- +.+|++.|||+..++.++|....++|+.
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3567778887764 4677773 5678888888888888888888887764
No 252
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=68.12 E-value=11 Score=37.34 Aligned_cols=48 Identities=23% Similarity=0.332 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 419 YFRTDLLYQMGVA-----EEPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 419 ~eeAe~lYqkALa-----lDP~Np~---allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
.+.|...|++|+. +.|.||- +.+|++.|||+..++.++|....++|+.
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3556667776654 4566663 5567777777777777777766666654
No 253
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=68.02 E-value=18 Score=34.09 Aligned_cols=56 Identities=18% Similarity=0.150 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 009204 435 NNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500 (540)
Q Consensus 435 ~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKAL 500 (540)
.|++.-+.+|. ..|+++.|.+..++. ++..-|..+|.... ..|+++-|+++|+++-
T Consensus 6 ~D~~~rF~LAL----~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL-~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 6 QDPHIRFDLAL----EYGNLDAALDEAKKL-----NDSITWERLIQEAL-AQGNASLAEMIYQTQH 61 (177)
T ss_dssp SCHHHHHHHHH----HTTCHHHHHHHHHHH-----CCHHHHHHHHHHHH-HTTCHHHHHHHHHHTT
T ss_pred CChHHHHHHHH----hcCCHHHHHHHHHHh-----CCHHHHHHHHHHHH-HcCChHHHHHHHHHhC
Confidence 46777777765 499999999997765 67889999999765 4789999999998763
No 254
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=66.64 E-value=12 Score=37.36 Aligned_cols=47 Identities=26% Similarity=0.344 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 420 FRTDLLYQMGVA-----EEPNNPL---LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 420 eeAe~lYqkALa-----lDP~Np~---allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
+.|...|++|+. +.|.+|- +.+|++.|+++..++.++|....++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 456666666654 3566663 4556777777667777777666666554
No 255
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=65.74 E-value=15 Score=37.99 Aligned_cols=86 Identities=13% Similarity=0.070 Sum_probs=60.9
Q ss_pred CCCHHHHHHHHHHHHHc--CCC-CHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCHHHHHH---HHHHHHHHcC
Q 009204 416 YMDYFRTDLLYQMGVAE--EPN-NPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS--DPPDAEALSQ---YADFLWLVRK 487 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALal--DP~-Np~allNLA~~L~~~~GD~deAEe~feRALeL--DPndAeAl~N---LA~~L~~~rG 487 (540)
.|+++.|.++|.++... .+. -.+.+.....++. ..+|+..|..++++|-.+ ...+.+.... +...+....+
T Consensus 144 ~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r 222 (429)
T 4b4t_R 144 IGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR 222 (429)
T ss_dssp HCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTS
T ss_pred cCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 38999999999998775 233 3356667777777 499999999999999765 3334443322 2222333468
Q ss_pred CHHHHHHHHHHHHHh
Q 009204 488 DLWAAEETYQQAMAA 502 (540)
Q Consensus 488 D~EEAee~feKALeL 502 (540)
+|.+|..+|..++.-
T Consensus 223 ~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 223 NFKEAAKLLVDSLAT 237 (429)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcc
Confidence 999999999998764
No 256
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=63.84 E-value=1.6e+02 Score=35.19 Aligned_cols=106 Identities=7% Similarity=-0.109 Sum_probs=73.6
Q ss_pred CCCHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHcCC
Q 009204 416 YMDYFRTDLLYQMGVA-----EEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS--DPPDAEALSQYADFLWLVRKD 488 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALa-----lDP~Np~allNLA~~L~~~~GD~deAEe~feRALeL--DPndAeAl~NLA~~L~~~rGD 488 (540)
.|+.++|..+|++.-. ..| |...|+.+-..|+ +.|+.++|.+.|++-.+. .| |...|+.+-..+.. .|+
T Consensus 140 ~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~glcK-~G~ 215 (1134)
T 3spa_A 140 TDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCMGR-QDQ 215 (1134)
T ss_dssp HTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHH-HTC
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHHHh-CCC
Confidence 4899999999976443 356 6788888888888 599999999999999874 46 45556555554544 354
Q ss_pred -HHHHHHHHHHHHHh--CCCCHHH-----HHHHHHHHHHcCCCcc
Q 009204 489 -LWAAEETYQQAMAA--EPNSSSY-----ASKYASFLWNTGGEET 525 (540)
Q Consensus 489 -~EEAee~feKALeL--DPdnpea-----l~NLA~~L~~~GR~Et 525 (540)
.++|.++|++..+. .|+...+ ......+|....+.+.
T Consensus 216 ~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~~vL~~Vrkv~P 260 (1134)
T 3spa_A 216 DAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRATVLKAVHKVKP 260 (1134)
T ss_dssp CHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHHHHHHHHGGGCC
T ss_pred cHHHHHHHHHHHHHcCCCCChhhcccccChhhHHHHHHHHHHhCc
Confidence 68899999999885 4554332 1224455555555543
No 257
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=62.98 E-value=17 Score=35.67 Aligned_cols=47 Identities=13% Similarity=0.110 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 455 DRAEECFKRAIQ-----SDPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 455 deAEe~feRALe-----LDPndAe---Al~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
++|.+.|++|++ +.|.+|. ...|++.|++...++.++|...-++|+.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568889999885 5788886 4557888999999999999998888776
No 258
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=62.79 E-value=16 Score=38.24 Aligned_cols=87 Identities=15% Similarity=0.092 Sum_probs=61.7
Q ss_pred CCCCHHHHHHHHHHHHHc--CCCCH----HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC---CCCHHH---HHHHHHHH
Q 009204 415 DYMDYFRTDLLYQMGVAE--EPNNP----LLLLNYAQFLHLVTKDYDRAEECFKRAIQSD---PPDAEA---LSQYADFL 482 (540)
Q Consensus 415 ~~Gd~eeAe~lYqkALal--DP~Np----~allNLA~~L~~~~GD~deAEe~feRALeLD---PndAeA---l~NLA~~L 482 (540)
+.|+|.+|..++.+.++. .-++. +++..-.+++. ..+++.++..+|.+|.... +.++.. +.-++..+
T Consensus 111 ~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~-~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~ 189 (394)
T 3txn_A 111 DTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH-ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGIL 189 (394)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHH
Confidence 348999999999988874 11222 34455566777 4999999999999998764 244443 33344455
Q ss_pred HH-HcCCHHHHHHHHHHHHHh
Q 009204 483 WL-VRKDLWAAEETYQQAMAA 502 (540)
Q Consensus 483 ~~-~rGD~EEAee~feKALeL 502 (540)
+. ..++|.+|..+|-+|++.
T Consensus 190 ~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 190 HAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHhc
Confidence 55 588999999999999853
No 259
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=62.02 E-value=12 Score=37.69 Aligned_cols=28 Identities=29% Similarity=0.273 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q 009204 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 439 allNLA~~L~~~~GD~deAEe~feRALe 466 (540)
+.+|++.|||+..++.++|.+..++|+.
T Consensus 198 LaLNfSVFyYEIln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 198 TILNYTILKYDLLGNPEGAMKFANRAIQ 225 (268)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 3445555555555555555555555544
No 260
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=61.07 E-value=19 Score=35.49 Aligned_cols=48 Identities=13% Similarity=0.199 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 454 YDRAEECFKRAIQ-----SDPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 454 ~deAEe~feRALe-----LDPndAe---Al~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
-++|.+.|++|+. +.|.+|- ...|++.|++...++.++|...-++|+.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678889999876 5788886 3557888999999999999988777765
No 261
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=60.78 E-value=19 Score=35.95 Aligned_cols=47 Identities=17% Similarity=0.242 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHH----cCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 455 DRAEECFKRAIQ----SDPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 455 deAEe~feRALe----LDPndAe---Al~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
++|.+.|++|++ +.|.+|. ...|++.|++...++.++|...-++|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568899999986 5777875 4557889999999999999999888886
No 262
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=59.45 E-value=21 Score=35.43 Aligned_cols=47 Identities=15% Similarity=0.228 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 455 DRAEECFKRAIQ-----SDPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 455 deAEe~feRALe-----LDPndAe---Al~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
++|.+.|++|+. +.|.+|- ...|++.|++...++.++|...-++|+.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568889999876 5788886 3557888999999999999888777765
No 263
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=59.28 E-value=7 Score=40.42 Aligned_cols=106 Identities=11% Similarity=0.096 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcC--CCC-HHHHHHHHHHHHHHcCCHHH
Q 009204 418 DYFRTDLLYQMGVAE---EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSD--PPD-AEALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 418 d~eeAe~lYqkALal---DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLD--Pnd-AeAl~NLA~~L~~~rGD~EE 491 (540)
..++-......+.+. +-.-..++..+|.+++ ..||+++|.++|.++...- +.+ .+.+.....+.. ..+|+..
T Consensus 109 ~l~~l~~~~~~~~~~~~~e~e~~~~~~~la~~~~-~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l-~~~d~~~ 186 (429)
T 4b4t_R 109 KIKELNEKIQKLEEDDEGELEQAQAWINLGEYYA-QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGF-FYNDQLY 186 (429)
T ss_dssp CHHHHHHHHHHHHHCCSCCCCCSSCCHHHHHHHH-HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHH-HHTCHHH
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH-HhccHHH
Confidence 344444444444442 2323457888999999 4999999999999998853 222 345555555444 3689999
Q ss_pred HHHHHHHHHHhC--CCCHH----HHHHHHHHHHHcCCCcc
Q 009204 492 AEETYQQAMAAE--PNSSS----YASKYASFLWNTGGEET 525 (540)
Q Consensus 492 Aee~feKALeLD--Pdnpe----al~NLA~~L~~~GR~Et 525 (540)
|..++.+|..+- ..++. .....|.+++..+++.+
T Consensus 187 ~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~ 226 (429)
T 4b4t_R 187 VKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKE 226 (429)
T ss_dssp HHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHH
T ss_pred HHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHH
Confidence 999999997652 22333 33445666667777654
No 264
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=59.25 E-value=21 Score=35.62 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 455 DRAEECFKRAIQ-----SDPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 455 deAEe~feRALe-----LDPndAe---Al~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
++|.+.|++|+. +.|.+|. ...|++.|++...++.++|...-++|+.
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 468889999885 5788886 4567888999999999999988887775
No 265
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.72 E-value=89 Score=32.44 Aligned_cols=85 Identities=9% Similarity=0.062 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHc--CCCC----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH---cCCCCHHH---HHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAE--EPNN----PLLLLNYAQFLHLVTKDYDRAEECFKRAIQ---SDPPDAEA---LSQYADFLWL 484 (540)
Q Consensus 417 Gd~eeAe~lYqkALal--DP~N----p~allNLA~~L~~~~GD~deAEe~feRALe---LDPndAeA---l~NLA~~L~~ 484 (540)
|++.+|...++..... ...+ .+.++--..+|. ..+|+.+|..+++++.. -.+.++.. +..+...++.
T Consensus 151 g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~~ 229 (445)
T 4b4t_P 151 GKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKISL 229 (445)
T ss_dssp TCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHH
Confidence 5555555555554321 0111 133444455566 48888888888888632 24444442 3333333445
Q ss_pred HcCCHHHHHHHHHHHHHh
Q 009204 485 VRKDLWAAEETYQQAMAA 502 (540)
Q Consensus 485 ~rGD~EEAee~feKALeL 502 (540)
..++|.+|-.+|..++..
T Consensus 230 ~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 230 HKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHCCHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhc
Confidence 577888888888888763
No 266
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=55.63 E-value=26 Score=35.04 Aligned_cols=47 Identities=13% Similarity=0.110 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHH-----cCCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 455 DRAEECFKRAIQ-----SDPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 455 deAEe~feRALe-----LDPndAe---Al~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
++|.+.|++|++ +.|.+|- ...|++.|++...++.++|...-++|+.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 568899999876 5788876 3557888999999999999888777765
No 267
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=50.05 E-value=71 Score=29.98 Aligned_cols=87 Identities=16% Similarity=0.050 Sum_probs=65.2
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCH
Q 009204 410 KLEPDDYMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDL 489 (540)
Q Consensus 410 ~Le~d~~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~ 489 (540)
...-+.-|+..+...+|-+.= -.+. |.++|.-+...+|..|+-++.+...+.-++-+|+.+..+|.+|- ..|+.
T Consensus 68 iFDis~C~NlKrVi~C~~~~n---~~se--~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~ 141 (172)
T 1wy6_A 68 YFDLDKCQNLKSVVECGVINN---TLNE--HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDE 141 (172)
T ss_dssp GSCGGGCSCTHHHHHHHHHTT---CCCH--HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCH
T ss_pred hcCcHhhhcHHHHHHHHHHhc---chHH--HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-Hhcch
Confidence 334456689999999987643 3332 44556544335999999999999988878888999999999865 57999
Q ss_pred HHHHHHHHHHHHh
Q 009204 490 WAAEETYQQAMAA 502 (540)
Q Consensus 490 EEAee~feKALeL 502 (540)
.+|.+.+.+|.+.
T Consensus 142 r~a~eLl~~AC~k 154 (172)
T 1wy6_A 142 RDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHh
Confidence 9999999999874
No 268
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=49.79 E-value=23 Score=35.60 Aligned_cols=49 Identities=20% Similarity=0.216 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHH-----c--CCCCHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 009204 454 YDRAEECFKRAIQ-----S--DPPDAE---ALSQYADFLWLVRKDLWAAEETYQQAMAA 502 (540)
Q Consensus 454 ~deAEe~feRALe-----L--DPndAe---Al~NLA~~L~~~rGD~EEAee~feKALeL 502 (540)
-++|.+.|++|++ + .|.+|- ...|+++|++...++.++|...-++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3568889998875 4 688876 34578889999999999999999999875
No 269
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=49.69 E-value=24 Score=28.96 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=9.2
Q ss_pred hcCCHHHHHHHHHHHHH
Q 009204 450 VTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 450 ~~GD~deAEe~feRALe 466 (540)
..|++++|..+|.+||+
T Consensus 23 ~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 23 KEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHH
Confidence 35555555555555554
No 270
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=49.12 E-value=25 Score=29.07 Aligned_cols=17 Identities=24% Similarity=0.337 Sum_probs=10.6
Q ss_pred hcCCHHHHHHHHHHHHH
Q 009204 450 VTKDYDRAEECFKRAIQ 466 (540)
Q Consensus 450 ~~GD~deAEe~feRALe 466 (540)
..|++++|..+|.+||+
T Consensus 31 ~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 31 KEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHH
Confidence 46666666666666655
No 271
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=49.02 E-value=71 Score=30.74 Aligned_cols=84 Identities=8% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-H
Q 009204 433 EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQS--DPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAAEPNSSS-Y 509 (540)
Q Consensus 433 DP~Np~allNLA~~L~~~~GD~deAEe~feRALeL--DPndAeAl~NLA~~L~~~rGD~EEAee~feKALeLDPdnpe-a 509 (540)
||....+|..|+.++. .+....+.+.|...... --..+..|..+|.++ ...|++.+|.+.|+++++..-.-.+ .
T Consensus 76 D~RYLklWl~Ya~~~~--~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~l-E~~g~~~~A~~Vy~~GI~~~A~P~~rL 152 (202)
T 3esl_A 76 DPRFLKIWIWYINLFL--SNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLL-ENAQFFLEAKVLLELGAENNCRPYNRL 152 (202)
T ss_dssp CHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHTTCBSHHHH
T ss_pred CHHHHHHHHHHHHhhc--ccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHcCCccHHHH
Confidence 5556667888887532 44466777877777664 466677888888765 5688999999999999997654333 2
Q ss_pred HHHHHHHHHH
Q 009204 510 ASKYASFLWN 519 (540)
Q Consensus 510 l~NLA~~L~~ 519 (540)
...+..+..+
T Consensus 153 ~~~~~~F~~R 162 (202)
T 3esl_A 153 LRSLSNYEDR 162 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3334444433
No 272
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.02 E-value=1.4e+02 Score=34.19 Aligned_cols=81 Identities=15% Similarity=0.037 Sum_probs=56.6
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-c--------------------CCCCHH-HHHHHHHHHHH
Q 009204 427 QMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ-S--------------------DPPDAE-ALSQYADFLWL 484 (540)
Q Consensus 427 qkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALe-L--------------------DPndAe-Al~NLA~~L~~ 484 (540)
++.+..-|.++..-+-+|.++. ..|++++|..+|++|-. + +++... .|+..-.-+++
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L-~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE 908 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYL-KSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLF 908 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHH-HTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCChHHHHHHHHHHH-HcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHH
Confidence 3455667888877788899888 49999999999998752 1 111111 13223333567
Q ss_pred HcCCHHHHHHHHHHHHHh-CCCCHH
Q 009204 485 VRKDLWAAEETYQQAMAA-EPNSSS 508 (540)
Q Consensus 485 ~rGD~EEAee~feKALeL-DPdnpe 508 (540)
..+-++-+++.-+.||+. +++++.
T Consensus 909 ~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 909 EESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred hcCCHHHHHHHHHHHHhhcccCCcc
Confidence 789999999999999985 456665
No 273
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=41.66 E-value=1e+02 Score=33.78 Aligned_cols=80 Identities=16% Similarity=0.015 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQ 498 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feK 498 (540)
..++...+.++....++ ....--++.... ..||++.|..+|++.-......+...+.+|..+. ..|+.++|..+|++
T Consensus 268 ~~~~~~~~~~~~~~~~~-~~~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~-~~g~~~~a~~~~~~ 344 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQS-TSLIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLL-ERGREAEAKEILHQ 344 (618)
T ss_dssp CHHHHHHHHHHHHTCCC-HHHHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHH-HTTCHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCC-hHHHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHH-HcCCHHHHHHHHHH
Confidence 45677777777665444 333334454445 3799999999998765544566888888898754 57999999999999
Q ss_pred HHH
Q 009204 499 AMA 501 (540)
Q Consensus 499 ALe 501 (540)
+..
T Consensus 345 ~a~ 347 (618)
T 1qsa_A 345 LMQ 347 (618)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 274
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=41.47 E-value=67 Score=33.46 Aligned_cols=108 Identities=9% Similarity=-0.096 Sum_probs=67.9
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCCH----HHHHHHHHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLL------LLNYAQFLHLVTKDYDRAEECFKRAIQS--DPPDA----EALSQYADFLWL 484 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~a------llNLA~~L~~~~GD~deAEe~feRALeL--DPndA----eAl~NLA~~L~~ 484 (540)
+..+.-......+++-.-+.-.. -..+|.+++. .|+|.+|.+.+.+.++- .-++. +++..-..++.
T Consensus 73 ~~~~~~~~~~~~~~~~a~~~~r~flr~~l~~kL~~l~~~-~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~- 150 (394)
T 3txn_A 73 AGTGIEVQLCKDCIEWAKQEKRTFLRQSLEARLIALYFD-TALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYH- 150 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHH-
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH-
Confidence 34455556666666532222122 2268998885 99999999999998883 22222 23333333344
Q ss_pred HcCCHHHHHHHHHHHHHhC---CCCHH----HHHHHHHHHH-HcCCCccc
Q 009204 485 VRKDLWAAEETYQQAMAAE---PNSSS----YASKYASFLW-NTGGEETC 526 (540)
Q Consensus 485 ~rGD~EEAee~feKALeLD---Pdnpe----al~NLA~~L~-~~GR~Et~ 526 (540)
..+++.++..+|.+|.... +.+|. ....-|.++. ..+++++|
T Consensus 151 ~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~~l~~~rdyk~A 200 (394)
T 3txn_A 151 ALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTA 200 (394)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHHHHHhccCHHHH
Confidence 4689999999999997753 23343 4556677777 78888764
No 275
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=38.49 E-value=39 Score=27.97 Aligned_cols=18 Identities=22% Similarity=0.497 Sum_probs=14.3
Q ss_pred hcCCHHHHHHHHHHHHHc
Q 009204 450 VTKDYDRAEECFKRAIQS 467 (540)
Q Consensus 450 ~~GD~deAEe~feRALeL 467 (540)
..|++++|..+|..||+.
T Consensus 28 ~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 28 SESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 588888888888888763
No 276
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=37.71 E-value=1.3e+02 Score=27.88 Aligned_cols=58 Identities=10% Similarity=0.105 Sum_probs=42.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCC------HHHHHH-HHHHHH-HHcCCHHHHHHHHHHHHH
Q 009204 443 YAQFLHLVTKDYDRAEECFKRAIQSDPPD------AEALSQ-YADFLW-LVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 443 LA~~L~~~~GD~deAEe~feRALeLDPnd------AeAl~N-LA~~L~-~~rGD~EEAee~feKALe 501 (540)
.|..++. .|+|=+|.+.++.+-...+.. -..+.+ +|..++ ..+|+...|...+++|+.
T Consensus 38 ~~i~lFn-~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 38 HGVRLYN-SGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHh-CCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3555675 799999999999999887665 234444 444333 347899999999999987
No 277
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=37.13 E-value=47 Score=27.72 Aligned_cols=18 Identities=22% Similarity=0.560 Sum_probs=14.4
Q ss_pred hcCCHHHHHHHHHHHHHc
Q 009204 450 VTKDYDRAEECFKRAIQS 467 (540)
Q Consensus 450 ~~GD~deAEe~feRALeL 467 (540)
..|++++|..+|..|++.
T Consensus 27 ~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 27 AESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHH
Confidence 588888888888888773
No 278
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=35.77 E-value=49 Score=28.94 Aligned_cols=18 Identities=22% Similarity=0.449 Sum_probs=14.7
Q ss_pred hcCCHHHHHHHHHHHHHc
Q 009204 450 VTKDYDRAEECFKRAIQS 467 (540)
Q Consensus 450 ~~GD~deAEe~feRALeL 467 (540)
..|++++|+.+|..|+++
T Consensus 30 ~ag~y~eAl~lY~~Aie~ 47 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQY 47 (117)
T ss_dssp HHTCHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHH
Confidence 588888888888888773
No 279
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=34.52 E-value=52 Score=26.93 Aligned_cols=15 Identities=27% Similarity=0.302 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHcCCC
Q 009204 456 RAEECFKRAIQSDPP 470 (540)
Q Consensus 456 eAEe~feRALeLDPn 470 (540)
+|+++|.+++...|+
T Consensus 36 ~aie~l~~~lk~e~d 50 (83)
T 2v6y_A 36 KAIEVLSQIIVLYPE 50 (83)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCC
Confidence 455555555554443
No 280
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=33.68 E-value=54 Score=26.99 Aligned_cols=16 Identities=13% Similarity=0.102 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHcCCCC
Q 009204 456 RAEECFKRAIQSDPPD 471 (540)
Q Consensus 456 eAEe~feRALeLDPnd 471 (540)
+|+++|.+++...|+.
T Consensus 44 ~aie~l~~alk~e~d~ 59 (83)
T 2w2u_A 44 KAIEVLAQLVSLYRDG 59 (83)
T ss_dssp HHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHCCCH
Confidence 5666666666655443
No 281
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=33.55 E-value=67 Score=25.99 Aligned_cols=18 Identities=11% Similarity=0.338 Sum_probs=14.2
Q ss_pred hcCCHHHHHHHHHHHHHc
Q 009204 450 VTKDYDRAEECFKRAIQS 467 (540)
Q Consensus 450 ~~GD~deAEe~feRALeL 467 (540)
..|++++|..+|..|+++
T Consensus 25 ~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 25 TATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHH
Confidence 578888888888888773
No 282
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.91 E-value=48 Score=36.14 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=37.5
Q ss_pred hcCCHHHHHHHHHHHHHcCC--CCH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 009204 450 VTKDYDRAEECFKRAIQSDP--PDA---EALSQYADFLWLVRKDLWAAEETYQQAMAAEPNS 506 (540)
Q Consensus 450 ~~GD~deAEe~feRALeLDP--ndA---eAl~NLA~~L~~~rGD~EEAee~feKALeLDPdn 506 (540)
..+++++|+.+..++.-... .+. ..++.+|.+.. .+++|.+|.+++..|++..|.+
T Consensus 243 ~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 243 NNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCS
T ss_pred ccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcc
Confidence 47888888888888853211 122 23333466544 5678999999999998887754
No 283
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=32.40 E-value=93 Score=29.21 Aligned_cols=57 Identities=14% Similarity=0.042 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 009204 417 MDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALS 476 (540)
Q Consensus 417 Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~ 476 (540)
|..++-++.+...+..++-+|..++.+|.+|. +.|+..+|.+.+++|-+. .-.+|..
T Consensus 105 ~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~-Klg~~r~a~eLl~~AC~k--G~kEAC~ 161 (172)
T 1wy6_A 105 GKRDKLEEIGREILKNNEVSASILVAIANALR-RVGDERDATTLLIEACKK--GEKEACN 161 (172)
T ss_dssp TCHHHHHHHHHHHC--CCSCHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHT--TCHHHHH
T ss_pred ccHhHHHHHHHHHhccCCCChHHHHHHHHHHH-HhcchhhHHHHHHHHHHh--hhHHHHH
Confidence 67788888888877778778999999999988 699999999999999763 3344443
No 284
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.56 E-value=2.8e+02 Score=28.69 Aligned_cols=84 Identities=8% Similarity=0.054 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCC----HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCHH--
Q 009204 440 LLNYAQFLHLVTKDYDRAEECFKRAIQS--DPPD----AEALSQYADFLWLVRKDLWAAEETYQQAMA---AEPNSSS-- 508 (540)
Q Consensus 440 llNLA~~L~~~~GD~deAEe~feRALeL--DPnd----AeAl~NLA~~L~~~rGD~EEAee~feKALe---LDPdnpe-- 508 (540)
...+|.++.. .|++.+|...+.....- ...+ .+.+..-..++. ..+|+.+|..+++++.. ..+.++.
T Consensus 140 ~~~La~i~e~-~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l-~~~d~~~a~~~~~ki~~~~~~~~~~~~lk 217 (445)
T 4b4t_P 140 TKDLVEIKKE-EGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSI-LKGDYSQATVLSRKILKKTFKNPKYESLK 217 (445)
T ss_dssp HHHHHHHHHH-HTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHH-ccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHhhcccCCcHHHH
Confidence 3457888884 99999999999887531 1122 234444455544 46899999999999743 3555554
Q ss_pred --HHHHHHHHHHHcCCCcc
Q 009204 509 --YASKYASFLWNTGGEET 525 (540)
Q Consensus 509 --al~NLA~~L~~~GR~Et 525 (540)
++...|.++...+++.+
T Consensus 218 ~~~~~~~~~~~~~e~~y~~ 236 (445)
T 4b4t_P 218 LEYYNLLVKISLHKREYLE 236 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHHhhhHHH
Confidence 45666777777777754
No 285
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=28.14 E-value=1.3e+02 Score=32.08 Aligned_cols=14 Identities=21% Similarity=0.420 Sum_probs=6.8
Q ss_pred cCCHHHHHHHHHHH
Q 009204 486 RKDLWAAEETYQQA 499 (540)
Q Consensus 486 rGD~EEAee~feKA 499 (540)
.+++.+|++++-.|
T Consensus 309 ~~~~reAl~~WA~A 322 (472)
T 3re2_A 309 KKKYYEAIASWVDA 322 (472)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHH
Confidence 44455555544444
No 286
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=26.35 E-value=75 Score=26.24 Aligned_cols=16 Identities=0% Similarity=0.137 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHcCCCC
Q 009204 456 RAEECFKRAIQSDPPD 471 (540)
Q Consensus 456 eAEe~feRALeLDPnd 471 (540)
+|+++|..++...|+.
T Consensus 41 ~Aie~ll~alk~e~d~ 56 (86)
T 4a5x_A 41 EGIDLLLQVLKGTKDN 56 (86)
T ss_dssp HHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHhhCCCH
Confidence 5666666666665543
No 287
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.19 E-value=1e+02 Score=33.59 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNN-------PLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA 472 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~N-------p~allNLA~~L~~~~GD~deAEe~feRALeLDPndA 472 (540)
++.+++|+.+..++. .|.+ ...++.+|.++. .+++|.+|.+++..|++..|.+.
T Consensus 244 ~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a-~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 244 NGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINA-IQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp SSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHH-HTTCHHHHHHHHHHHTSSCSCSS
T ss_pred cCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHhCCcch
Confidence 367889999998884 4432 233445687777 59999999999999999887664
No 288
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=25.02 E-value=3.4e+02 Score=24.99 Aligned_cols=89 Identities=11% Similarity=0.118 Sum_probs=0.0
Q ss_pred HHHHHHHHHc---------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH--cCCCCHHHHHHHHHHHHHHcCCHHH
Q 009204 423 DLLYQMGVAE---------EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQ--SDPPDAEALSQYADFLWLVRKDLWA 491 (540)
Q Consensus 423 e~lYqkALal---------DP~Np~allNLA~~L~~~~GD~deAEe~feRALe--LDPndAeAl~NLA~~L~~~rGD~EE 491 (540)
..++++++.. ||....+|..|+.++. .+.+.|..... +--..+..|..+|.++-. .|++.+
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~~-------~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~-~~~~~~ 114 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLCN-------EPLDMYSYLHNQGIGVSLAQFYISWAEEYEA-RENFRK 114 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHCS-------CHHHHHHHHHHTTSSTTBHHHHHHHHHHHHH-TTCHHH
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcC-------CHHHHHHHHHHCCcchhhHHHHHHHHHHHHH-cCCHHH
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 009204 492 AEETYQQAMAAEPNSSSYASKYASFLWN 519 (540)
Q Consensus 492 Aee~feKALeLDPdnpeal~NLA~~L~~ 519 (540)
|.+.|+.+++....-.+-+...-..+..
T Consensus 115 A~~Iy~~Gi~~~A~P~~~L~~~~~~F~~ 142 (164)
T 2wvi_A 115 ADAIFQEGIQQKAEPLERLQSQHRQFQA 142 (164)
T ss_dssp HHHHHHHHHHTTCBSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHH
No 289
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=24.68 E-value=4.9e+02 Score=31.11 Aligned_cols=81 Identities=7% Similarity=-0.115 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHH
Q 009204 439 LLLNYAQFLHLVTKDYDRAEECFKRAIQ-----SDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMAA--EPNSSSYAS 511 (540)
Q Consensus 439 allNLA~~L~~~~GD~deAEe~feRALe-----LDPndAeAl~NLA~~L~~~rGD~EEAee~feKALeL--DPdnpeal~ 511 (540)
.|+.+-..|+ +.|+.++|.+.|++.-+ ..| |...|+.+-..+. ..|+.++|.+.|++-.+. .|+ ...+.
T Consensus 129 TynaLIdglc-K~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glc-k~G~~~eA~~Lf~eM~~~G~~PD-vvTYn 204 (1134)
T 3spa_A 129 RLLAFFKCCL-LTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWA-RQGAFKELVYVLFMVKDAGLTPD-LLSYA 204 (1134)
T ss_dssp HHHHHHHHHH-HHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHH-HHTCHHHHHHHHHHHHHTTCCCC-HHHHH
T ss_pred HHHHHHHHHH-hCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHH-hCCCHHHHHHHHHHHHHcCCCCc-HHHHH
Confidence 4555666677 59999999999976443 345 5556776666555 479999999999999885 464 55666
Q ss_pred HHHHHHHHcCCC
Q 009204 512 KYASFLWNTGGE 523 (540)
Q Consensus 512 NLA~~L~~~GR~ 523 (540)
.+-..+.+.|+.
T Consensus 205 tLI~glcK~G~~ 216 (1134)
T 3spa_A 205 AALQCMGRQDQD 216 (1134)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHhCCCc
Confidence 777788888875
No 290
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=24.54 E-value=2.5e+02 Score=22.84 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=19.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q 009204 478 YADFLWLVRKDLWAAEETYQQAMAAEPNSSSYA 510 (540)
Q Consensus 478 LA~~L~~~rGD~EEAee~feKALeLDPdnpeal 510 (540)
+|--+. ..|++++|..+|-+|+..-|+-.+.+
T Consensus 23 ~GE~L~-~~g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 23 LGEELL-AQGDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHH-HCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 344433 35666777777777777666655543
No 291
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=24.23 E-value=90 Score=26.00 Aligned_cols=48 Identities=6% Similarity=0.012 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCH
Q 009204 416 YMDYFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDA 472 (540)
Q Consensus 416 ~Gd~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndA 472 (540)
..-.++|..+..+|++.|-.- -+.-|..+| .+|+++|.+++...|+..
T Consensus 9 ~~~l~~Ai~lv~~Ave~D~~g---~y~eAl~~Y------~~Aie~l~~alk~e~~~~ 56 (93)
T 1wfd_A 9 DSDSTAAVAVLKRAVELDAES---RYQQALVCY------QEGIDMLLQVLKGTKESS 56 (93)
T ss_dssp CCHHHHHHHHHHHHHHHHHTT---CHHHHHHHH------HHHHHHHHHHHHTCCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CHHHHHHHH------HHHHHHHHHHHHHCCCHH
Confidence 355678888888888874321 111233334 488899999998877654
No 292
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.81 E-value=1.7e+02 Score=24.48 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=39.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCH----HHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 009204 443 YAQFLHLVTKDYDRAEECFKRAIQSDPPDA----EALSQYADFLWL-VRKDLWAAEETYQQAMA 501 (540)
Q Consensus 443 LA~~L~~~~GD~deAEe~feRALeLDPndA----eAl~NLA~~L~~-~rGD~EEAee~feKALe 501 (540)
.|..++. .|+|=+|.+.++.+-...|+.. ..+.+++..++. .+|+. |...+++|+.
T Consensus 7 ~~~~lfn-~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 7 EVLGLWR-AGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHH-TTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHh-CCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3566775 7999999999999999886532 244455554443 46766 8888999877
No 293
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=23.61 E-value=1.7e+02 Score=31.59 Aligned_cols=43 Identities=9% Similarity=0.142 Sum_probs=18.4
Q ss_pred HHHHHHHHHHc-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 009204 457 AEECFKRAIQS-----DPPDAEALSQYADFLWLVRKDLWAAEETYQQAM 500 (540)
Q Consensus 457 AEe~feRALeL-----DPndAeAl~NLA~~L~~~rGD~EEAee~feKAL 500 (540)
++++|++||.. +-.+--.|..+|..++ ..+++.+|.+++-.|-
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~-R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHC-RNRNVREALQAWADTA 330 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHH-HTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHH-HhhhHHHHHHHhhhhh
Confidence 44555555552 2222223333344333 2445555555554443
No 294
>3r84_A Mediator of RNA polymerase II transcription subun; four-helix bundle, nucleus; HET: MSE; 2.05A {Saccharomyces cerevisiae}
Probab=23.25 E-value=1.1e+02 Score=25.84 Aligned_cols=48 Identities=23% Similarity=0.490 Sum_probs=39.9
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHH--------HHHHhhhhhchhhHHHHHHHHHHhhh
Q 009204 187 EDFAYCSVNKAFSSLVFIIRELQA--------CALHIREGLYCEDLKEIISKMQREMN 236 (540)
Q Consensus 187 ~~~~~~s~~~afssmv~~i~~~~~--------~~l~~~~~l~~~dl~~vl~~~~~em~ 236 (540)
=+..-|++=+-+|..+.-+.++.+ |.-++++ |+.+|..|=.+++||+-
T Consensus 13 ID~~i~sLL~~as~~i~tls~~k~~~~~~K~~F~~~t~~--fy~tL~~v~v~LrkEIk 68 (86)
T 3r84_A 13 IETQLCSMLQEASQVTFIFGELKRGNESVKPQFENHVKQ--FYERLDKSTTQLRKEIQ 68 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCcHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 355678999999999999998865 6667766 78999999999999974
No 295
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=22.78 E-value=3.1e+02 Score=23.74 Aligned_cols=48 Identities=15% Similarity=0.042 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHH
Q 009204 419 YFRTDLLYQMGVAEEPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEAL 475 (540)
Q Consensus 419 ~eeAe~lYqkALalDP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl 475 (540)
.++|..+..+|+..|-. --+.-|..+| .+|+++|.++++..+.+....
T Consensus 15 l~kAi~lv~~Ave~D~a---g~y~eAl~lY------~~Aie~l~~alk~e~~~~~~k 62 (117)
T 2cpt_A 15 LQKAIDLASKAAQEDKA---GNYEEALQLY------QHAVQYFLHVVKYEAQGDKAK 62 (117)
T ss_dssp HHHHHHHHHHHHHHHHH---TCHHHHHHHH------HHHHHHHHHHHHTSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHc---cCHHHHHHHH------HHHHHHHHHHHHhccCCHHHH
Confidence 67888888898865321 1111233334 489999999999887776543
No 296
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=22.76 E-value=94 Score=34.17 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=21.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 009204 444 AQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADF 481 (540)
Q Consensus 444 A~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~ 481 (540)
|.-++ ..|+|.-|.+....++..+|+|.++..-++..
T Consensus 456 a~~~~-~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~ 492 (658)
T 2cfu_A 456 ARASY-ARGEYRWVVEVVNRLVFAEPDNRAARELQADA 492 (658)
T ss_dssp HHHHH-HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHH-HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 33344 25666666666666666666666665555544
No 297
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.59 E-value=52 Score=29.27 Aligned_cols=32 Identities=19% Similarity=0.297 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 454 YDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 454 ~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
+++|.++..+||++|-. |+.++|+++|++.|.
T Consensus 19 h~~AF~~Is~AL~~DE~----------------g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDEL----------------GQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHHHHHHH----------------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhc----------------CCHHHHHHHHHHHHH
No 298
>1m3w_A H10H24; four-helix bundle, heme binding, maquette, heme binding protein, electron transport, de novo protein; 2.80A {Synthetic} SCOP: k.8.1.1
Probab=21.78 E-value=43 Score=23.12 Aligned_cols=13 Identities=46% Similarity=0.708 Sum_probs=11.1
Q ss_pred cHHHHHHHHHHHH
Q 009204 76 DDEFAKQAEELAR 88 (540)
Q Consensus 76 ~~~f~~~~~~l~~ 88 (540)
.|||+|+.|||-.
T Consensus 10 heeflkkfeellk 22 (32)
T 1m3w_A 10 HEEFLKKFEELLK 22 (32)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5899999999863
No 299
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=21.69 E-value=2.6e+02 Score=27.15 Aligned_cols=58 Identities=9% Similarity=0.001 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHH-----------------cCCCCHHH-HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHH
Q 009204 417 MDYFRTDLLYQMGVA-----------------EEPNNPLL-LLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEAL 475 (540)
Q Consensus 417 Gd~eeAe~lYqkALa-----------------lDP~Np~a-llNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl 475 (540)
.+|.+|..++++.|. +||.|.+. +..+|.+|.+ .|+.++|+.+|.+....+|-.+.+-
T Consensus 76 KdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq-~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 76 KDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTL-SGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp TCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHH-hcCHHHhhhHhhhhcCCccccchHH
Confidence 778899988888882 25667764 4457887775 9999999999999999999887654
No 300
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=21.12 E-value=2.3e+02 Score=27.15 Aligned_cols=69 Identities=6% Similarity=0.121 Sum_probs=48.5
Q ss_pred CHHHHHhcccccccccCCCCCCCHHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCC
Q 009204 396 DHETMQHFVTPVTVKLEPDDYMDYFRTDLLYQMGVAE--EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDP 469 (540)
Q Consensus 396 D~e~~~~lvapv~a~Le~d~~Gd~eeAe~lYqkALal--DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDP 469 (540)
|+-+++-+.-..... ..++..++...|...... --..+..|-.+|.++. ..|++++|.+.|+++|+...
T Consensus 76 D~RYLklWl~Ya~~~----~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE-~~g~~~~A~~Vy~~GI~~~A 146 (202)
T 3esl_A 76 DPRFLKIWIWYINLF----LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLE-NAQFFLEAKVLLELGAENNC 146 (202)
T ss_dssp CHHHHHHHHHHHHHH----STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHH-HTTCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhh----cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHcCC
Confidence 666666553322110 013355777777776664 4667888889999888 59999999999999999754
No 301
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=20.63 E-value=2.1e+02 Score=31.06 Aligned_cols=66 Identities=12% Similarity=0.158 Sum_probs=39.5
Q ss_pred CCCHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHc-----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 009204 434 PNNPLLLLNYAQFLHLVT--KDYDRAEECFKRAIQS-----DPPDAEALSQYADFLWLVRKDLWAAEETYQQAMA 501 (540)
Q Consensus 434 P~Np~allNLA~~L~~~~--GD~deAEe~feRALeL-----DPndAeAl~NLA~~L~~~rGD~EEAee~feKALe 501 (540)
-..|.++.|||.+-. .. -....++.+|.+||.. +-.+.-.|..+|..++. .+++.+|+.++-.|-.
T Consensus 274 ~rYPmALgnLgDLEe-~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR-~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 274 ERYPMALGNLADLEE-LEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCR-NRNVREALQAWADTAT 346 (550)
T ss_dssp TTCHHHHHHHHHHHH-HSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHH-TTCHHHHHHHHHHHHH
T ss_pred hhCchhhcchhhHhh-cCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhh-cchHHHHHHHHHHHHH
Confidence 346777777777432 11 1122477778887774 33344455556665553 6778888777776654
No 302
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=20.38 E-value=1.3e+02 Score=29.28 Aligned_cols=75 Identities=15% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHc---------CCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCHHHHH
Q 009204 423 DLLYQMGVAE---------EPNNPLLLLNYAQFLHLVTKDYDRAEECFKRAIQSDPPDAEALSQYADFLWLVRKDLWAAE 493 (540)
Q Consensus 423 e~lYqkALal---------DP~Np~allNLA~~L~~~~GD~deAEe~feRALeLDPndAeAl~NLA~~L~~~rGD~EEAe 493 (540)
..++++++.. ||....+|..|+.++.. ....-.|-..-.+--..+..|..+|.++-. .|++.+|.
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~~~~-----p~~if~~L~~~~IG~~~AlfYe~wA~~lE~-~g~~~~A~ 170 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNYIDE-----PVELFSFLAHHHIGQESSIFYEEYANYFES-RGLFQKAD 170 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTTCSC-----HHHHHHHHHHTTCSTTBHHHHHHHHHHHHH-TTCHHHHH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHccCC-----HHHHHHHHHHCCcchhHHHHHHHHHHHHHH-cCCHHHHH
Q ss_pred HHHHHHHHhC
Q 009204 494 ETYQQAMAAE 503 (540)
Q Consensus 494 e~feKALeLD 503 (540)
+.|+++|+..
T Consensus 171 ~Vy~~Gi~~~ 180 (223)
T 4aez_C 171 EVYQKGKRMK 180 (223)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Done!