Query 009206
Match_columns 540
No_of_seqs 489 out of 3365
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 21:13:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009206.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009206hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 3.7E-46 1.3E-50 425.9 28.7 372 35-468 19-506 (780)
2 3apq_A DNAJ homolog subfamily 100.0 8.7E-39 3E-43 307.9 10.8 197 37-253 2-201 (210)
3 3us3_A Calsequestrin-1; calciu 100.0 3.8E-35 1.3E-39 306.4 24.4 282 124-464 5-296 (367)
4 1sji_A Calsequestrin 2, calseq 100.0 2.5E-34 8.4E-39 298.2 25.5 297 124-494 3-315 (350)
5 3f8u_A Protein disulfide-isome 100.0 2.5E-31 8.4E-36 286.9 26.3 277 137-470 2-293 (481)
6 2r2j_A Thioredoxin domain-cont 100.0 6.4E-32 2.2E-36 283.4 20.8 278 135-470 4-290 (382)
7 2b5e_A Protein disulfide-isome 100.0 4.1E-31 1.4E-35 287.0 17.4 283 136-494 14-301 (504)
8 3ed3_A Protein disulfide-isome 100.0 6.9E-28 2.4E-32 244.3 15.9 230 135-378 16-282 (298)
9 3apo_A DNAJ homolog subfamily 99.9 2E-24 6.9E-29 246.3 25.9 287 137-492 441-736 (780)
10 3idv_A Protein disulfide-isome 99.9 9.8E-25 3.3E-29 212.8 18.4 209 136-366 15-238 (241)
11 3q6o_A Sulfhydryl oxidase 1; p 99.9 7.9E-22 2.7E-26 193.7 20.8 209 137-362 13-237 (244)
12 3t58_A Sulfhydryl oxidase 1; o 99.8 5.8E-20 2E-24 199.2 21.1 210 137-362 13-237 (519)
13 2ywm_A Glutaredoxin-like prote 99.8 2.5E-19 8.5E-24 173.7 13.9 195 146-363 11-218 (229)
14 3h79_A Thioredoxin-like protei 99.8 8.6E-20 2.9E-24 160.5 8.5 106 136-252 15-126 (127)
15 3uem_A Protein disulfide-isome 99.8 3.3E-19 1.1E-23 184.8 13.8 208 137-364 118-356 (361)
16 1a8l_A Protein disulfide oxido 99.8 4.2E-19 1.4E-23 171.5 13.0 193 152-363 21-224 (226)
17 2och_A Hypothetical protein DN 99.8 2.3E-19 7.8E-24 142.7 7.0 67 36-102 7-73 (73)
18 1hdj_A Human HSP40, HDJ-1; mol 99.8 6.4E-19 2.2E-23 141.7 7.1 70 36-105 2-73 (77)
19 2o37_A Protein SIS1; HSP40, J- 99.7 9.3E-19 3.2E-23 145.6 6.4 70 36-105 7-76 (92)
20 2ctp_A DNAJ homolog subfamily 99.7 1E-18 3.5E-23 140.8 5.8 71 34-104 4-76 (78)
21 2dn9_A DNAJ homolog subfamily 99.7 1.9E-18 6.5E-23 139.6 6.5 69 35-103 5-76 (79)
22 2ej7_A HCG3 gene; HCG3 protein 99.7 2.2E-18 7.5E-23 140.2 6.8 72 33-104 5-80 (82)
23 2cug_A Mkiaa0962 protein; DNAJ 99.7 3.2E-18 1.1E-22 141.2 6.1 69 35-103 15-85 (88)
24 3zzx_A Thioredoxin; oxidoreduc 99.7 2.1E-18 7.2E-23 147.1 5.2 99 139-252 3-104 (105)
25 2dml_A Protein disulfide-isome 99.7 1.4E-17 4.8E-22 146.4 10.5 110 136-257 17-127 (130)
26 2ctr_A DNAJ homolog subfamily 99.7 4.4E-18 1.5E-22 140.3 5.7 71 35-105 5-77 (88)
27 3gnj_A Thioredoxin domain prot 99.7 6.9E-18 2.3E-22 143.7 5.4 104 136-252 4-108 (111)
28 2lgw_A DNAJ homolog subfamily 99.7 8.8E-18 3E-22 141.4 5.4 69 37-105 2-74 (99)
29 2ctw_A DNAJ homolog subfamily 99.7 1.9E-17 6.5E-22 142.0 7.5 72 34-105 14-88 (109)
30 3ga4_A Dolichyl-diphosphooligo 99.7 2.3E-17 7.7E-22 153.4 8.6 108 137-253 19-152 (178)
31 2ctq_A DNAJ homolog subfamily 99.7 9.4E-18 3.2E-22 144.7 5.2 72 34-105 17-91 (112)
32 2dmx_A DNAJ homolog subfamily 99.7 1E-17 3.6E-22 139.3 5.1 71 35-105 7-81 (92)
33 1x5d_A Protein disulfide-isome 99.7 1.7E-17 5.7E-22 146.2 6.4 106 136-254 7-117 (133)
34 2voc_A Thioredoxin; electron t 99.7 2.9E-17 1E-21 140.9 7.6 101 138-252 3-103 (112)
35 2dj1_A Protein disulfide-isome 99.7 3.9E-17 1.3E-21 145.4 8.2 103 137-253 18-123 (140)
36 3uvt_A Thioredoxin domain-cont 99.7 1.2E-17 4.1E-22 142.1 4.4 104 135-252 4-110 (111)
37 1bq0_A DNAJ, HSP40; chaperone, 99.7 1.5E-17 5E-22 141.3 4.6 70 36-105 2-74 (103)
38 3die_A Thioredoxin, TRX; elect 99.7 2.6E-17 8.8E-22 138.8 6.1 102 137-252 4-105 (106)
39 3tco_A Thioredoxin (TRXA-1); d 99.7 2.1E-17 7.2E-22 139.9 5.4 103 137-252 5-107 (109)
40 2trx_A Thioredoxin; electron t 99.7 4.1E-17 1.4E-21 138.3 7.0 103 137-252 3-106 (108)
41 2djj_A PDI, protein disulfide- 99.7 9.4E-17 3.2E-21 139.1 8.9 103 136-252 7-115 (121)
42 3p2a_A Thioredoxin 2, putative 99.7 6.9E-17 2.3E-21 145.7 7.8 106 137-255 39-144 (148)
43 2yua_A Williams-beuren syndrom 99.7 6.1E-17 2.1E-21 136.4 6.9 66 36-101 16-84 (99)
44 1nsw_A Thioredoxin, TRX; therm 99.7 3.2E-17 1.1E-21 138.2 5.1 102 138-252 2-103 (105)
45 1mek_A Protein disulfide isome 99.7 5.7E-17 2E-21 139.5 6.7 105 137-252 8-115 (120)
46 2i4a_A Thioredoxin; acidophIle 99.7 7.8E-17 2.7E-21 136.1 7.0 103 137-252 3-106 (107)
47 2qgv_A Hydrogenase-1 operon pr 99.7 1.9E-17 6.3E-22 147.5 3.2 103 138-253 19-124 (140)
48 3hz4_A Thioredoxin; NYSGXRC, P 99.7 4.7E-17 1.6E-21 145.6 5.9 105 136-253 6-111 (140)
49 1wjz_A 1700030A21RIK protein; 99.7 3.6E-17 1.2E-21 136.6 4.5 67 36-102 15-90 (94)
50 1t00_A Thioredoxin, TRX; redox 99.7 8.1E-17 2.8E-21 137.5 6.7 103 137-252 6-109 (112)
51 2qsi_A Putative hydrogenase ex 99.7 5.2E-17 1.8E-21 144.1 5.6 104 137-253 16-122 (137)
52 2e0q_A Thioredoxin; electron t 99.7 5.9E-17 2E-21 135.6 5.5 101 138-252 1-101 (104)
53 2dj3_A Protein disulfide-isome 99.7 8.4E-17 2.9E-21 141.9 6.8 106 136-252 7-116 (133)
54 2o8v_B Thioredoxin 1; disulfid 99.7 6.9E-17 2.4E-21 142.5 6.2 104 136-252 22-126 (128)
55 3qou_A Protein YBBN; thioredox 99.7 2E-16 6.8E-21 158.5 10.2 103 137-252 8-112 (287)
56 1thx_A Thioredoxin, thioredoxi 99.7 1.4E-16 4.8E-21 136.3 7.7 103 137-252 8-111 (115)
57 3aps_A DNAJ homolog subfamily 99.7 4.5E-17 1.5E-21 141.5 4.6 108 137-257 4-116 (122)
58 4euy_A Uncharacterized protein 99.7 5.4E-17 1.8E-21 137.5 5.0 98 141-252 6-103 (105)
59 2qsa_A DNAJ homolog DNJ-2; J-d 99.6 4.7E-17 1.6E-21 139.7 4.1 68 36-103 14-88 (109)
60 1x5e_A Thioredoxin domain cont 99.6 1.3E-16 4.6E-21 139.5 6.9 101 136-252 7-108 (126)
61 2yzu_A Thioredoxin; redox prot 99.6 7.3E-17 2.5E-21 136.4 4.9 103 137-252 2-104 (109)
62 2l5l_A Thioredoxin; structural 99.6 1.8E-16 6.3E-21 140.9 7.8 105 136-254 9-126 (136)
63 3hxs_A Thioredoxin, TRXP; elec 99.6 1.8E-16 6.1E-21 141.4 7.2 104 136-252 22-137 (141)
64 1fb6_A Thioredoxin M; electron 99.6 1.7E-16 5.8E-21 133.5 6.6 102 138-252 2-104 (105)
65 2ppt_A Thioredoxin-2; thiredox 99.6 1.1E-16 3.9E-21 146.0 5.9 103 137-252 48-150 (155)
66 1dby_A Chloroplast thioredoxin 99.6 1.3E-16 4.4E-21 135.0 5.6 103 137-252 2-105 (107)
67 3qfa_C Thioredoxin; protein-pr 99.6 5.6E-17 1.9E-21 140.3 3.3 100 138-252 14-115 (116)
68 1w4v_A Thioredoxin, mitochondr 99.6 1.5E-16 5E-21 138.1 5.8 104 136-252 13-117 (119)
69 2i1u_A Thioredoxin, TRX, MPT46 99.6 9E-17 3.1E-21 139.1 4.5 104 136-252 12-116 (121)
70 1oaz_A Thioredoxin 1; immune s 99.6 2E-16 6.8E-21 138.6 5.6 103 137-252 4-121 (123)
71 2c0g_A ERP29 homolog, windbeut 99.6 6.4E-16 2.2E-20 151.6 9.0 105 136-253 16-131 (248)
72 2hls_A Protein disulfide oxido 99.6 3.6E-15 1.2E-19 146.3 14.3 192 146-364 17-225 (243)
73 2es7_A Q8ZP25_salty, putative 99.6 8.6E-16 3E-20 138.2 8.3 102 138-253 19-124 (142)
74 2pu9_C TRX-F, thioredoxin F-ty 99.6 7.7E-16 2.6E-20 131.4 7.6 102 136-252 5-109 (111)
75 3ul3_B Thioredoxin, thioredoxi 99.6 4.9E-16 1.7E-20 136.6 6.2 98 141-251 30-127 (128)
76 3idv_A Protein disulfide-isome 99.6 9.2E-16 3.1E-20 149.0 8.7 103 137-253 131-236 (241)
77 1r26_A Thioredoxin; redox-acti 99.6 4.5E-16 1.5E-20 136.7 5.6 100 138-252 21-121 (125)
78 3dxb_A Thioredoxin N-terminall 99.6 5.7E-16 1.9E-20 149.7 6.7 105 136-253 12-117 (222)
79 2dj0_A Thioredoxin-related tra 99.6 2.2E-16 7.5E-21 140.5 3.3 103 137-252 8-119 (137)
80 1gh2_A Thioredoxin-like protei 99.6 7.9E-16 2.7E-20 130.4 6.5 100 138-252 3-105 (107)
81 1gh6_A Large T antigen; tumor 99.6 7.6E-17 2.6E-21 138.7 -0.1 66 36-102 7-74 (114)
82 2av4_A Thioredoxin-like protei 99.6 4.4E-16 1.5E-20 140.5 4.8 102 138-252 23-137 (160)
83 1faf_A Large T antigen; J doma 99.6 3.2E-16 1.1E-20 126.1 3.5 65 36-102 10-76 (79)
84 1xwb_A Thioredoxin; dimerizati 99.6 5.8E-16 2E-20 130.4 5.1 101 138-252 2-105 (106)
85 3d6i_A Monothiol glutaredoxin- 99.6 8.8E-16 3E-20 131.2 6.2 101 138-252 2-107 (112)
86 3f3q_A Thioredoxin-1; His TAG, 99.6 7E-16 2.4E-20 131.7 5.3 99 139-252 10-108 (109)
87 1v98_A Thioredoxin; oxidoreduc 99.6 1.1E-15 3.8E-20 136.4 6.7 105 136-253 33-137 (140)
88 2l6l_A DNAJ homolog subfamily 99.6 9.2E-16 3.1E-20 140.1 5.9 69 34-102 7-84 (155)
89 2ys8_A RAB-related GTP-binding 99.6 5.6E-16 1.9E-20 128.1 4.0 60 36-95 26-87 (90)
90 2pf4_E Small T antigen; PP2A, 99.6 1.6E-16 5.4E-21 146.0 0.7 65 36-101 10-76 (174)
91 1ep7_A Thioredoxin CH1, H-type 99.6 5.3E-16 1.8E-20 132.3 3.9 102 137-252 3-109 (112)
92 2qc7_A ERP31, ERP28, endoplasm 99.6 1.9E-15 6.4E-20 147.7 7.7 102 137-253 6-118 (240)
93 4f9z_D Endoplasmic reticulum r 99.6 3.5E-14 1.2E-18 137.6 16.2 201 138-363 11-223 (227)
94 3m9j_A Thioredoxin; oxidoreduc 99.6 8.2E-16 2.8E-20 129.4 4.0 96 142-252 7-104 (105)
95 1syr_A Thioredoxin; SGPP, stru 99.6 7.4E-16 2.5E-20 132.0 3.3 101 137-252 10-110 (112)
96 2vlu_A Thioredoxin, thioredoxi 99.6 1.2E-15 4.2E-20 132.3 4.7 101 137-252 14-118 (122)
97 2xc2_A Thioredoxinn; oxidoredu 99.6 1.4E-15 4.6E-20 131.3 4.7 100 137-252 14-116 (117)
98 2l57_A Uncharacterized protein 99.6 4.1E-15 1.4E-19 129.9 7.8 103 138-253 6-116 (126)
99 2l6c_A Thioredoxin; oxidoreduc 99.6 1.8E-15 6.2E-20 129.4 5.2 99 139-252 6-104 (110)
100 1zma_A Bacterocin transport ac 99.6 4.7E-16 1.6E-20 134.5 1.3 101 138-250 14-117 (118)
101 1faa_A Thioredoxin F; electron 99.6 2.7E-15 9.1E-20 130.7 6.0 102 136-252 18-122 (124)
102 2yj7_A LPBCA thioredoxin; oxid 99.3 3.1E-16 1.1E-20 131.7 0.0 102 138-252 3-105 (106)
103 3uem_A Protein disulfide-isome 99.5 7.7E-13 2.6E-17 136.7 25.2 282 137-493 18-329 (361)
104 3gix_A Thioredoxin-like protei 99.5 1.2E-15 4.1E-20 138.3 3.5 99 141-252 9-119 (149)
105 2vim_A Thioredoxin, TRX; thior 99.5 2.9E-15 9.9E-20 125.6 5.0 99 139-252 2-103 (104)
106 2j23_A Thioredoxin; immune pro 99.5 3.2E-15 1.1E-19 130.0 4.8 102 137-252 16-119 (121)
107 3emx_A Thioredoxin; structural 99.5 1.6E-15 5.3E-20 134.9 2.8 99 137-252 17-124 (135)
108 2oe3_A Thioredoxin-3; electron 99.5 2E-15 6.9E-20 130.2 3.0 99 138-251 14-113 (114)
109 3hho_A CO-chaperone protein HS 99.5 3.9E-15 1.3E-19 138.1 4.7 65 35-99 2-76 (174)
110 3lz8_A Putative chaperone DNAJ 99.5 9.6E-16 3.3E-20 156.1 0.0 67 36-102 27-95 (329)
111 3evi_A Phosducin-like protein 99.5 5.4E-15 1.8E-19 128.7 4.3 99 137-252 4-112 (118)
112 2wz9_A Glutaredoxin-3; protein 99.5 5.5E-15 1.9E-19 134.2 4.5 103 136-253 12-117 (153)
113 3d22_A TRXH4, thioredoxin H-ty 99.5 8.5E-15 2.9E-19 130.2 4.8 105 138-257 26-135 (139)
114 1iur_A KIAA0730 protein; DNAJ 99.5 3.4E-15 1.2E-19 122.4 1.5 59 36-94 15-77 (88)
115 1a8l_A Protein disulfide oxido 99.5 1.3E-14 4.4E-19 139.8 5.7 101 139-252 119-224 (226)
116 3uo3_A J-type CO-chaperone JAC 99.5 1.1E-14 3.7E-19 135.7 4.3 69 31-99 5-80 (181)
117 1xfl_A Thioredoxin H1; AT3G510 99.5 9.7E-15 3.3E-19 127.8 3.8 101 137-252 17-122 (124)
118 1fpo_A HSC20, chaperone protei 99.5 1.1E-14 3.9E-19 134.6 4.1 63 38-100 2-74 (171)
119 1qgv_A Spliceosomal protein U5 99.5 9.5E-15 3.3E-19 131.2 3.3 98 142-252 10-119 (142)
120 3qcp_A QSOX from trypanosoma b 99.5 3.5E-15 1.2E-19 158.2 0.3 103 136-250 23-135 (470)
121 2qwo_B Putative tyrosine-prote 99.5 1.9E-14 6.4E-19 118.4 4.2 53 37-89 33-91 (92)
122 2vm1_A Thioredoxin, thioredoxi 99.5 1.7E-14 5.7E-19 123.9 4.1 102 137-253 7-113 (118)
123 2b5e_A Protein disulfide-isome 99.5 3.3E-14 1.1E-18 153.9 7.4 104 136-252 358-465 (504)
124 2dbc_A PDCL2, unnamed protein 99.5 2.4E-14 8.2E-19 127.3 4.9 101 135-252 9-119 (135)
125 3bvo_A CO-chaperone protein HS 99.5 2.9E-14 9.8E-19 135.6 5.3 64 35-98 41-114 (207)
126 3cxg_A Putative thioredoxin; m 99.5 2.5E-14 8.5E-19 126.8 4.4 103 136-252 20-127 (133)
127 1n4c_A Auxilin; four helix bun 99.5 2.4E-14 8.1E-19 132.3 4.3 60 37-96 117-182 (182)
128 2h8l_A Protein disulfide-isome 99.5 2.7E-12 9.3E-17 126.3 19.3 172 255-469 4-188 (252)
129 3f8u_A Protein disulfide-isome 99.5 3.8E-14 1.3E-18 152.4 6.5 106 136-253 352-460 (481)
130 2guz_A Mitochondrial import in 99.5 1.5E-14 5.2E-19 113.9 2.4 57 36-93 13-70 (71)
131 2f51_A Thioredoxin; electron t 99.4 2.1E-14 7.2E-19 124.4 2.6 100 138-252 5-111 (118)
132 1ti3_A Thioredoxin H, PTTRXH1; 99.4 1.4E-14 4.7E-19 123.5 1.3 101 137-252 5-110 (113)
133 2kuc_A Putative disulphide-iso 99.4 6.6E-14 2.2E-18 122.7 5.2 103 139-252 9-119 (130)
134 1wmj_A Thioredoxin H-type; str 99.4 2.5E-14 8.7E-19 125.1 1.1 102 137-253 15-121 (130)
135 3ag7_A Putative uncharacterize 99.4 6.4E-14 2.2E-18 118.9 3.3 55 36-91 40-104 (106)
136 2trc_P Phosducin, MEKA, PP33; 99.4 3.8E-14 1.3E-18 136.6 0.4 101 137-252 100-211 (217)
137 3ec3_A Protein disulfide-isome 99.4 9.4E-12 3.2E-16 122.3 17.2 171 255-470 4-189 (250)
138 4f9z_D Endoplasmic reticulum r 99.4 1.9E-11 6.4E-16 118.3 18.4 174 262-494 14-198 (227)
139 1fo5_A Thioredoxin; disulfide 99.4 5.8E-13 2E-17 107.4 6.4 82 154-252 3-84 (85)
140 2fwh_A Thiol:disulfide interch 99.4 2.1E-13 7.2E-18 120.8 3.9 100 142-252 18-126 (134)
141 1nho_A Probable thioredoxin; b 99.4 8.7E-13 3E-17 106.3 7.3 81 155-252 3-83 (85)
142 2djk_A PDI, protein disulfide- 99.4 3.8E-13 1.3E-17 119.2 5.0 101 138-253 8-114 (133)
143 1a0r_P Phosducin, MEKA, PP33; 99.4 1.5E-13 5.2E-18 134.5 2.5 101 137-252 113-224 (245)
144 3fk8_A Disulphide isomerase; A 99.4 6.9E-13 2.4E-17 116.8 6.6 89 151-252 27-131 (133)
145 2ywm_A Glutaredoxin-like prote 99.3 3.9E-13 1.3E-17 129.9 4.8 99 138-253 120-219 (229)
146 3kp8_A Vkorc1/thioredoxin doma 99.3 1.3E-13 4.4E-18 117.5 0.8 77 153-250 12-91 (106)
147 1wou_A Thioredoxin -related pr 99.3 3.2E-13 1.1E-17 117.8 2.7 100 137-250 6-121 (123)
148 2hls_A Protein disulfide oxido 99.3 4E-12 1.4E-16 124.5 8.0 85 152-253 137-225 (243)
149 3us3_A Calsequestrin-1; calciu 99.3 4.1E-11 1.4E-15 124.4 15.9 207 137-366 126-349 (367)
150 2lst_A Thioredoxin; structural 98.9 3.4E-13 1.1E-17 118.2 0.0 100 145-253 11-115 (130)
151 1sji_A Calsequestrin 2, calseq 99.3 5.7E-11 2E-15 122.4 15.7 203 137-364 124-345 (350)
152 3f9u_A Putative exported cytoc 99.2 3.3E-12 1.1E-16 117.8 4.4 104 139-252 29-164 (172)
153 2h8l_A Protein disulfide-isome 99.2 1.7E-10 5.9E-15 113.3 16.6 212 137-374 7-240 (252)
154 3dml_A Putative uncharacterize 99.2 2.4E-12 8.2E-17 111.0 1.9 89 152-254 17-110 (116)
155 1sen_A Thioredoxin-like protei 99.2 4.3E-12 1.5E-16 116.6 1.4 99 146-254 39-148 (164)
156 3iv4_A Putative oxidoreductase 99.2 5.8E-12 2E-16 107.4 1.8 100 138-248 8-110 (112)
157 1ilo_A Conserved hypothetical 99.2 2.3E-11 7.9E-16 96.2 4.9 74 156-249 2-76 (77)
158 2ju5_A Thioredoxin disulfide i 99.1 6.4E-11 2.2E-15 107.4 7.2 98 144-252 34-150 (154)
159 1lu4_A Soluble secreted antige 99.1 1.3E-10 4.3E-15 101.7 8.0 89 152-252 23-134 (136)
160 2b5x_A YKUV protein, TRXY; thi 99.1 1.4E-10 4.9E-15 102.7 7.8 104 140-253 16-144 (148)
161 1zzo_A RV1677; thioredoxin fol 99.1 1.8E-10 6.3E-15 100.4 7.7 101 140-252 12-133 (136)
162 3ec3_A Protein disulfide-isome 99.0 4.4E-09 1.5E-13 103.2 16.7 203 137-366 7-229 (250)
163 2h30_A Thioredoxin, peptide me 99.0 1.5E-10 5E-15 105.1 5.6 102 138-252 23-154 (164)
164 3erw_A Sporulation thiol-disul 99.0 3E-10 1E-14 100.3 7.2 88 152-249 33-144 (145)
165 3raz_A Thioredoxin-related pro 99.0 4.4E-10 1.5E-14 100.8 7.2 97 152-252 23-138 (151)
166 3ph9_A Anterior gradient prote 99.0 9.9E-11 3.4E-15 106.1 2.9 96 145-252 32-143 (151)
167 3or5_A Thiol:disulfide interch 99.0 5.8E-10 2E-14 101.0 7.1 98 152-253 33-150 (165)
168 3kp9_A Vkorc1/thioredoxin doma 99.0 7.8E-11 2.7E-15 117.7 0.8 75 156-251 200-277 (291)
169 2f9s_A Thiol-disulfide oxidore 98.9 1.2E-09 4E-14 97.8 7.2 91 152-252 25-136 (151)
170 4evm_A Thioredoxin family prot 98.9 1.9E-09 6.3E-14 93.7 6.7 90 152-251 21-136 (138)
171 2lja_A Putative thiol-disulfid 98.9 3.6E-09 1.2E-13 94.5 8.7 91 152-252 29-141 (152)
172 2l5o_A Putative thioredoxin; s 98.9 3.6E-09 1.2E-13 94.6 8.5 93 152-254 27-141 (153)
173 3hcz_A Possible thiol-disulfid 98.9 3.2E-09 1.1E-13 94.0 8.1 91 152-252 30-144 (148)
174 2r2j_A Thioredoxin domain-cont 98.9 3.9E-08 1.3E-12 102.4 17.4 201 138-368 120-332 (382)
175 2fgx_A Putative thioredoxin; N 98.9 1.2E-09 4.2E-14 92.7 4.2 78 154-249 29-106 (107)
176 3fkf_A Thiol-disulfide oxidore 98.9 6.1E-09 2.1E-13 92.2 8.8 88 152-252 32-144 (148)
177 3gl3_A Putative thiol:disulfid 98.8 4.4E-09 1.5E-13 93.9 7.7 91 152-252 27-140 (152)
178 3ira_A Conserved protein; meth 98.8 9.7E-10 3.3E-14 101.7 3.0 76 143-227 29-116 (173)
179 3ia1_A THIO-disulfide isomeras 98.8 4.9E-09 1.7E-13 93.9 7.3 87 154-252 31-142 (154)
180 2b1k_A Thiol:disulfide interch 98.8 4.6E-09 1.6E-13 95.7 5.8 89 151-252 49-158 (168)
181 3lwa_A Secreted thiol-disulfid 98.8 1E-08 3.5E-13 95.0 8.0 98 152-253 58-180 (183)
182 1kng_A Thiol:disulfide interch 98.8 4.5E-09 1.5E-13 94.2 4.8 90 152-253 41-151 (156)
183 3eyt_A Uncharacterized protein 98.7 1.1E-08 3.6E-13 92.1 6.9 92 152-253 27-151 (158)
184 1ttz_A Conserved hypothetical 98.7 2.2E-09 7.5E-14 87.8 1.6 73 157-252 3-75 (87)
185 2lrn_A Thiol:disulfide interch 98.7 1.3E-08 4.6E-13 91.1 6.9 88 152-252 28-139 (152)
186 3lor_A Thiol-disulfide isomera 98.7 1E-08 3.5E-13 92.3 6.1 92 152-253 29-154 (160)
187 1z6n_A Hypothetical protein PA 98.7 4.1E-09 1.4E-13 97.1 3.3 69 152-227 53-121 (167)
188 3ha9_A Uncharacterized thiored 98.7 2.5E-08 8.6E-13 90.5 8.1 88 152-252 36-162 (165)
189 1i5g_A Tryparedoxin II; electr 98.7 1.4E-08 4.7E-13 90.1 6.0 70 152-227 27-121 (144)
190 3eur_A Uncharacterized protein 98.7 1.9E-08 6.5E-13 89.0 5.6 93 152-250 30-141 (142)
191 1o8x_A Tryparedoxin, TRYX, TXN 98.7 1.9E-08 6.4E-13 89.5 5.4 70 152-227 27-121 (146)
192 3ewl_A Uncharacterized conserv 98.6 2.2E-08 7.4E-13 88.3 5.5 94 152-252 26-139 (142)
193 3hdc_A Thioredoxin family prot 98.6 2.8E-08 9.5E-13 89.7 6.0 91 152-252 40-150 (158)
194 3kcm_A Thioredoxin family prot 98.6 2.9E-08 1E-12 88.7 5.9 91 152-252 27-141 (154)
195 1o73_A Tryparedoxin; electron 98.6 2.3E-08 7.8E-13 88.4 4.7 70 152-227 27-121 (144)
196 2guz_B Mitochondrial import in 98.6 2.9E-08 1E-12 75.9 4.6 51 38-89 5-58 (65)
197 2hyx_A Protein DIPZ; thioredox 98.6 6.9E-08 2.4E-12 99.3 7.9 92 152-253 81-198 (352)
198 2lrt_A Uncharacterized protein 98.6 5.5E-08 1.9E-12 87.4 5.9 87 152-248 34-142 (152)
199 1jfu_A Thiol:disulfide interch 98.5 9.9E-08 3.4E-12 88.4 7.1 98 152-253 59-179 (186)
200 3s9f_A Tryparedoxin; thioredox 98.5 5.5E-08 1.9E-12 88.8 5.2 68 152-225 47-137 (165)
201 2ywi_A Hypothetical conserved 98.5 1.1E-07 3.8E-12 88.7 6.9 93 152-254 44-174 (196)
202 3kh7_A Thiol:disulfide interch 98.5 8.7E-08 3E-12 88.4 5.7 89 152-253 57-166 (176)
203 2cvb_A Probable thiol-disulfid 98.5 1.8E-07 6.1E-12 86.9 7.6 91 152-254 32-159 (188)
204 2y4t_A DNAJ homolog subfamily 98.5 6.4E-08 2.2E-12 100.8 4.9 62 37-98 382-449 (450)
205 3fw2_A Thiol-disulfide oxidore 98.5 4.3E-07 1.5E-11 80.9 9.1 88 152-252 32-146 (150)
206 2e7p_A Glutaredoxin; thioredox 98.5 1E-08 3.4E-13 87.7 -1.8 88 147-252 14-106 (116)
207 2dlx_A UBX domain-containing p 98.5 2.7E-07 9.3E-12 83.5 7.4 99 144-253 29-135 (153)
208 2k8s_A Thioredoxin; dimer, str 98.4 4.5E-08 1.5E-12 78.1 1.5 60 157-227 4-64 (80)
209 2lus_A Thioredoxion; CR-Trp16, 97.8 2.6E-08 8.8E-13 87.8 0.0 69 153-227 25-120 (143)
210 2k6v_A Putative cytochrome C o 98.4 1.5E-07 5.1E-12 85.6 4.3 97 152-252 34-171 (172)
211 2ggt_A SCO1 protein homolog, m 98.4 9.8E-07 3.3E-11 79.5 9.3 92 152-253 22-160 (164)
212 2vup_A Glutathione peroxidase- 98.4 7.5E-07 2.6E-11 83.1 8.6 98 152-253 47-184 (190)
213 3ed3_A Protein disulfide-isome 98.3 3.4E-06 1.2E-10 84.7 13.3 158 262-459 22-199 (298)
214 1hyu_A AHPF, alkyl hydroperoxi 98.3 2.1E-07 7.3E-12 100.9 4.7 94 140-251 103-197 (521)
215 2l4c_A Endoplasmic reticulum r 98.3 3E-06 1E-10 73.7 10.3 100 255-364 17-123 (124)
216 2rli_A SCO2 protein homolog, m 98.3 1.8E-06 6.1E-11 78.4 9.3 92 152-253 25-163 (171)
217 3cmi_A Peroxiredoxin HYR1; thi 98.3 8.1E-07 2.8E-11 81.2 6.9 96 152-252 31-166 (171)
218 2p31_A CL683, glutathione pero 98.3 1E-06 3.5E-11 81.5 7.5 97 152-252 48-179 (181)
219 2ls5_A Uncharacterized protein 97.6 8.9E-08 3E-12 86.2 0.0 95 152-251 32-145 (159)
220 2p5q_A Glutathione peroxidase 98.3 1E-06 3.5E-11 79.8 7.0 97 152-252 31-166 (170)
221 3dwv_A Glutathione peroxidase- 98.3 2.1E-06 7.2E-11 79.8 9.1 98 152-253 45-182 (187)
222 4fo5_A Thioredoxin-like protei 98.3 7.2E-07 2.4E-11 78.8 5.5 69 152-226 31-124 (143)
223 1ego_A Glutaredoxin; electron 98.3 8.3E-07 2.8E-11 71.0 5.4 79 157-252 3-82 (85)
224 3u5r_E Uncharacterized protein 98.3 1.4E-06 4.8E-11 83.3 7.7 89 153-253 58-186 (218)
225 1wjk_A C330018D20RIK protein; 98.2 3.8E-07 1.3E-11 76.3 2.6 79 152-252 14-94 (100)
226 2v1m_A Glutathione peroxidase; 98.2 1.9E-06 6.6E-11 77.9 6.7 97 152-252 30-165 (169)
227 1eej_A Thiol:disulfide interch 98.2 1.3E-06 4.3E-11 83.6 5.4 84 152-252 85-209 (216)
228 2obi_A PHGPX, GPX-4, phospholi 98.1 1.9E-06 6.4E-11 79.7 5.6 95 152-250 46-180 (183)
229 1we0_A Alkyl hydroperoxide red 98.1 3.7E-06 1.3E-10 77.9 7.7 91 152-252 30-155 (187)
230 1zof_A Alkyl hydroperoxide-red 98.1 4.1E-06 1.4E-10 78.5 7.8 91 152-252 32-159 (198)
231 3gyk_A 27KDA outer membrane pr 98.1 2.9E-06 1E-10 77.7 5.6 33 152-184 21-53 (175)
232 3drn_A Peroxiredoxin, bacterio 98.1 3.4E-06 1.2E-10 76.2 5.4 90 152-251 27-146 (161)
233 2bmx_A Alkyl hydroperoxidase C 98.0 6.2E-06 2.1E-10 77.1 7.2 91 152-252 44-168 (195)
234 1xvw_A Hypothetical protein RV 98.0 4.7E-06 1.6E-10 74.8 5.6 88 154-251 37-157 (160)
235 3kij_A Probable glutathione pe 98.0 7.1E-06 2.4E-10 75.6 6.9 97 152-252 37-168 (180)
236 1t3b_A Thiol:disulfide interch 98.0 3.8E-06 1.3E-10 80.0 5.1 83 152-251 85-208 (211)
237 2gs3_A PHGPX, GPX-4, phospholi 98.0 6E-06 2.1E-10 76.5 6.1 57 152-208 48-113 (185)
238 2f8a_A Glutathione peroxidase 98.0 9.9E-06 3.4E-10 76.9 7.3 43 152-194 46-89 (208)
239 2l4c_A Endoplasmic reticulum r 98.0 6.9E-06 2.4E-10 71.5 5.2 95 138-252 23-122 (124)
240 1qmv_A Human thioredoxin perox 97.9 1.4E-05 4.8E-10 74.8 7.1 91 152-252 33-161 (197)
241 1un2_A DSBA, thiol-disulfide i 97.9 1.5E-06 5E-11 82.0 -0.3 54 143-196 101-159 (197)
242 2qc7_A ERP31, ERP28, endoplasm 97.9 5.4E-05 1.8E-09 73.5 10.6 98 262-364 10-118 (240)
243 1xzo_A BSSCO, hypothetical pro 97.9 6.4E-05 2.2E-09 68.1 10.2 97 152-252 32-170 (174)
244 1h75_A Glutaredoxin-like prote 97.8 4.1E-06 1.4E-10 66.4 1.6 71 157-249 3-73 (81)
245 3zzx_A Thioredoxin; oxidoreduc 97.8 4.9E-05 1.7E-09 63.8 8.1 96 263-364 6-105 (105)
246 2h01_A 2-Cys peroxiredoxin; th 97.8 3.6E-05 1.2E-09 71.5 8.0 91 152-252 30-157 (192)
247 1zye_A Thioredoxin-dependent p 97.8 4.2E-05 1.5E-09 73.1 8.3 91 152-252 55-183 (220)
248 2qgv_A Hydrogenase-1 operon pr 97.8 5.3E-05 1.8E-09 67.0 7.8 96 262-364 22-124 (140)
249 1r7h_A NRDH-redoxin; thioredox 97.8 2.2E-05 7.6E-10 60.8 4.7 71 157-249 3-73 (75)
250 3ga4_A Dolichyl-diphosphooligo 97.8 9.7E-05 3.3E-09 68.2 9.7 113 262-378 23-166 (178)
251 3h79_A Thioredoxin-like protei 97.8 7.7E-05 2.6E-09 64.2 8.5 97 262-363 20-126 (127)
252 2b7k_A SCO1 protein; metalloch 97.7 6.8E-05 2.3E-09 70.4 8.3 96 152-257 40-182 (200)
253 2dml_A Protein disulfide-isome 97.7 0.00021 7E-09 61.5 10.6 84 278-363 35-122 (130)
254 1uul_A Tryparedoxin peroxidase 97.7 4.3E-05 1.5E-09 71.7 6.5 97 152-252 35-163 (202)
255 2es7_A Q8ZP25_salty, putative 97.7 7.1E-05 2.4E-09 66.5 7.5 96 262-365 22-125 (142)
256 2c0g_A ERP29 homolog, windbeut 97.7 0.00021 7.1E-09 69.6 11.3 98 262-364 21-131 (248)
257 2qsi_A Putative hydrogenase ex 97.7 0.00016 5.5E-09 63.7 9.5 97 262-364 20-122 (137)
258 2djk_A PDI, protein disulfide- 97.7 7.4E-05 2.5E-09 65.3 6.9 106 256-368 5-118 (133)
259 3hd5_A Thiol:disulfide interch 97.7 3.4E-05 1.2E-09 71.9 5.0 43 151-193 23-65 (195)
260 3h93_A Thiol:disulfide interch 97.7 3.2E-05 1.1E-09 71.9 4.8 35 152-186 24-58 (192)
261 2voc_A Thioredoxin; electron t 97.6 0.00023 7.7E-09 59.8 9.6 86 278-366 17-106 (112)
262 3ztl_A Thioredoxin peroxidase; 97.5 5.9E-05 2E-09 72.1 4.9 96 152-251 68-195 (222)
263 1kte_A Thioltransferase; redox 97.5 1.5E-05 5E-10 66.6 0.5 67 147-226 6-76 (105)
264 1v58_A Thiol:disulfide interch 97.5 7E-05 2.4E-09 72.6 5.3 88 152-252 96-231 (241)
265 1nm3_A Protein HI0572; hybrid, 97.5 0.00081 2.8E-08 64.7 12.5 56 152-207 32-91 (241)
266 1x5d_A Protein disulfide-isome 97.5 0.00037 1.3E-08 59.9 8.9 83 278-363 25-115 (133)
267 3tco_A Thioredoxin (TRXA-1); d 97.5 0.00026 8.9E-09 58.4 7.5 95 262-363 9-107 (109)
268 1mek_A Protein disulfide isome 97.5 0.00077 2.6E-08 56.4 10.6 97 262-364 12-116 (120)
269 2i81_A 2-Cys peroxiredoxin; st 97.5 0.00018 6.2E-09 68.3 7.0 91 152-252 51-178 (213)
270 2znm_A Thiol:disulfide interch 97.5 0.00045 1.5E-08 64.1 9.6 33 152-184 21-53 (195)
271 2dj1_A Protein disulfide-isome 97.4 0.00037 1.3E-08 60.6 8.5 92 268-366 27-125 (140)
272 2a4v_A Peroxiredoxin DOT5; yea 97.4 8.6E-05 2.9E-09 66.6 4.3 94 154-252 36-152 (159)
273 3hxs_A Thioredoxin, TRXP; elec 97.4 0.0005 1.7E-08 60.0 8.9 83 278-363 51-137 (141)
274 3gkn_A Bacterioferritin comigr 97.4 0.00012 4.1E-09 65.7 4.9 96 152-251 34-159 (163)
275 2i4a_A Thioredoxin; acidophIle 97.4 0.00036 1.2E-08 57.4 7.3 83 278-363 20-106 (107)
276 3gnj_A Thioredoxin domain prot 97.4 0.00032 1.1E-08 58.2 6.8 82 279-363 23-108 (111)
277 3uvt_A Thioredoxin domain-cont 97.3 0.00053 1.8E-08 56.8 7.9 94 262-363 10-110 (111)
278 1x5e_A Thioredoxin domain cont 97.3 0.00044 1.5E-08 59.1 7.5 85 280-368 25-113 (126)
279 1oaz_A Thioredoxin 1; immune s 97.3 0.00037 1.3E-08 59.9 6.9 73 288-363 49-121 (123)
280 3ul3_B Thioredoxin, thioredoxi 97.3 0.00029 9.9E-09 60.7 6.2 83 278-363 42-128 (128)
281 2i3y_A Epididymal secretory gl 97.3 0.0012 4E-08 62.8 11.0 42 152-194 55-97 (215)
282 2jsy_A Probable thiol peroxida 97.3 0.00015 5E-09 65.5 4.5 62 152-220 43-105 (167)
283 1thx_A Thioredoxin, thioredoxi 97.3 0.00067 2.3E-08 56.5 8.3 83 278-363 25-111 (115)
284 3apq_A DNAJ homolog subfamily 97.3 0.00035 1.2E-08 65.8 7.3 90 280-372 116-209 (210)
285 3die_A Thioredoxin, TRX; elect 97.3 0.00041 1.4E-08 56.9 6.8 83 278-363 19-105 (106)
286 2c0d_A Thioredoxin peroxidase 97.3 0.00038 1.3E-08 66.5 7.5 97 152-252 55-182 (221)
287 2trx_A Thioredoxin; electron t 97.3 0.00043 1.5E-08 57.2 6.9 83 278-363 20-106 (108)
288 1w4v_A Thioredoxin, mitochondr 97.3 0.00039 1.3E-08 59.0 6.7 83 278-363 31-117 (119)
289 3qfa_C Thioredoxin; protein-pr 97.3 0.00058 2E-08 57.8 7.8 90 268-363 22-115 (116)
290 2yzu_A Thioredoxin; redox prot 97.3 0.00058 2E-08 56.1 7.4 82 279-363 19-104 (109)
291 4euy_A Uncharacterized protein 97.3 0.00029 9.8E-09 58.3 5.4 82 278-363 18-103 (105)
292 3p2a_A Thioredoxin 2, putative 97.2 0.00073 2.5E-08 59.6 7.9 90 268-363 48-141 (148)
293 3qou_A Protein YBBN; thioredox 97.2 0.0017 5.7E-08 64.0 11.3 98 262-364 12-113 (287)
294 3m9j_A Thioredoxin; oxidoreduc 97.2 0.0007 2.4E-08 55.5 7.0 90 268-363 11-104 (105)
295 2l57_A Uncharacterized protein 97.2 0.00074 2.5E-08 57.7 7.4 87 278-364 26-116 (126)
296 2e0q_A Thioredoxin; electron t 97.2 0.0008 2.7E-08 54.7 7.0 89 268-363 9-101 (104)
297 2l5l_A Thioredoxin; structural 97.2 0.00085 2.9E-08 58.4 7.5 86 278-366 38-127 (136)
298 2o8v_B Thioredoxin 1; disulfid 97.2 0.0005 1.7E-08 59.4 5.9 83 278-363 40-126 (128)
299 3hz4_A Thioredoxin; NYSGXRC, P 97.2 0.00042 1.5E-08 60.7 5.5 83 278-363 24-110 (140)
300 3aps_A DNAJ homolog subfamily 97.2 0.00036 1.2E-08 59.2 4.9 83 278-363 21-111 (122)
301 2ppt_A Thioredoxin-2; thiredox 97.1 0.00078 2.7E-08 60.4 7.2 83 278-363 64-150 (155)
302 2i1u_A Thioredoxin, TRX, MPT46 97.1 0.00062 2.1E-08 57.5 6.1 83 278-363 30-116 (121)
303 2klx_A Glutaredoxin; thioredox 97.1 0.00028 9.6E-09 56.8 3.5 56 156-226 7-63 (89)
304 2pn8_A Peroxiredoxin-4; thiore 97.1 0.00066 2.3E-08 64.2 6.7 97 152-252 47-175 (211)
305 1nsw_A Thioredoxin, TRX; therm 97.1 0.0006 2.1E-08 55.9 5.6 81 279-362 18-102 (105)
306 1t00_A Thioredoxin, TRX; redox 97.1 0.00077 2.6E-08 56.1 6.3 83 278-363 23-109 (112)
307 1dby_A Chloroplast thioredoxin 97.1 0.0011 3.7E-08 54.6 7.0 82 278-362 19-104 (107)
308 2oe3_A Thioredoxin-3; electron 97.1 0.0012 4E-08 55.7 7.2 93 262-362 17-113 (114)
309 1xwb_A Thioredoxin; dimerizati 97.1 0.0012 4E-08 54.1 7.0 91 268-363 11-105 (106)
310 4g2e_A Peroxiredoxin; redox pr 97.1 0.00056 1.9E-08 61.4 5.4 56 152-207 29-86 (157)
311 4gqc_A Thiol peroxidase, perox 97.1 0.00047 1.6E-08 62.5 4.9 99 151-252 31-158 (164)
312 1xvq_A Thiol peroxidase; thior 97.0 0.0014 4.7E-08 59.8 8.0 41 152-194 43-84 (175)
313 1n8j_A AHPC, alkyl hydroperoxi 97.0 0.0011 3.6E-08 61.3 7.1 97 152-252 29-154 (186)
314 2hze_A Glutaredoxin-1; thiored 97.0 0.00014 4.8E-09 61.8 0.9 60 156-226 20-83 (114)
315 1fb6_A Thioredoxin M; electron 97.0 0.0013 4.5E-08 53.7 6.9 82 278-362 18-103 (105)
316 2r37_A Glutathione peroxidase 97.0 0.0034 1.2E-07 59.2 10.6 42 152-194 37-79 (207)
317 2j23_A Thioredoxin; immune pro 97.0 0.0013 4.6E-08 55.8 7.1 95 262-363 20-119 (121)
318 3f3q_A Thioredoxin-1; His TAG, 97.0 0.0014 4.6E-08 54.7 7.0 81 278-363 24-108 (109)
319 2cq9_A GLRX2 protein, glutared 97.0 0.00035 1.2E-08 60.9 3.1 65 146-226 20-88 (130)
320 2l6c_A Thioredoxin; oxidoreduc 97.0 0.0019 6.3E-08 53.9 7.5 82 278-363 19-104 (110)
321 2vim_A Thioredoxin, TRX; thior 96.9 0.0023 7.7E-08 52.1 7.7 90 268-363 10-103 (104)
322 1syr_A Thioredoxin; SGPP, stru 96.9 0.002 6.8E-08 53.7 7.4 88 268-363 19-110 (112)
323 1ep7_A Thioredoxin CH1, H-type 96.9 0.0013 4.4E-08 54.6 6.1 81 279-363 25-109 (112)
324 1gh2_A Thioredoxin-like protei 96.9 0.0022 7.6E-08 52.8 7.5 90 268-363 12-105 (107)
325 1z6m_A Conserved hypothetical 96.9 0.0013 4.5E-08 59.8 6.6 35 152-186 26-62 (175)
326 2vlu_A Thioredoxin, thioredoxi 96.9 0.0014 4.6E-08 55.5 6.2 81 278-363 34-118 (122)
327 3t58_A Sulfhydryl oxidase 1; o 96.9 0.012 4E-07 63.5 14.9 85 279-363 31-125 (519)
328 2yan_A Glutaredoxin-3; oxidore 96.8 0.00039 1.3E-08 58.0 2.3 65 146-226 10-80 (105)
329 2ht9_A Glutaredoxin-2; thiored 96.8 0.00041 1.4E-08 61.9 2.4 65 146-226 42-110 (146)
330 2av4_A Thioredoxin-like protei 96.8 0.0011 3.7E-08 59.6 5.0 84 278-363 41-137 (160)
331 3ixr_A Bacterioferritin comigr 96.8 0.00097 3.3E-08 61.2 4.9 56 152-207 50-107 (179)
332 2djj_A PDI, protein disulfide- 96.8 0.0014 4.7E-08 55.3 5.6 81 278-363 25-115 (121)
333 3d6i_A Monothiol glutaredoxin- 96.8 0.0039 1.3E-07 51.7 8.3 92 268-363 11-107 (112)
334 1tp9_A Peroxiredoxin, PRX D (t 96.8 0.0013 4.4E-08 59.2 5.5 56 152-207 34-93 (162)
335 1r26_A Thioredoxin; redox-acti 96.8 0.0026 9E-08 54.6 7.2 94 262-363 24-121 (125)
336 2dj3_A Protein disulfide-isome 96.8 0.0011 3.6E-08 57.1 4.6 85 278-364 25-117 (133)
337 3c1r_A Glutaredoxin-1; oxidize 96.8 0.00027 9.4E-09 60.5 0.7 68 146-226 18-90 (118)
338 3bj5_A Protein disulfide-isome 96.8 0.0038 1.3E-07 55.6 8.2 103 137-253 15-126 (147)
339 1q98_A Thiol peroxidase, TPX; 96.8 0.001 3.5E-08 60.0 4.5 55 152-207 42-97 (165)
340 1fo5_A Thioredoxin; disulfide 96.7 0.0033 1.1E-07 49.1 6.9 77 280-363 4-84 (85)
341 1v98_A Thioredoxin; oxidoreduc 96.7 0.0019 6.5E-08 56.3 5.9 69 292-363 68-136 (140)
342 1zma_A Bacterocin transport ac 96.7 0.0021 7.1E-08 54.2 5.9 80 279-361 30-117 (118)
343 3qpm_A Peroxiredoxin; oxidored 96.7 0.0027 9.3E-08 61.3 7.4 97 152-252 76-204 (240)
344 2rem_A Disulfide oxidoreductas 96.7 0.0017 5.8E-08 59.9 5.7 35 152-186 24-58 (193)
345 2xc2_A Thioredoxinn; oxidoredu 96.7 0.0034 1.2E-07 52.7 7.0 95 262-363 18-116 (117)
346 3me7_A Putative uncharacterize 96.7 0.0054 1.9E-07 55.5 8.8 97 152-252 27-160 (170)
347 3ic4_A Glutaredoxin (GRX-1); s 96.7 0.00077 2.6E-08 54.4 2.7 72 157-250 14-91 (92)
348 3iv4_A Putative oxidoreductase 96.7 0.0019 6.3E-08 54.7 5.1 93 263-360 12-111 (112)
349 2dj0_A Thioredoxin-related tra 96.7 0.0016 5.6E-08 56.6 5.0 96 262-362 12-118 (137)
350 1fov_A Glutaredoxin 3, GRX3; a 96.7 0.00094 3.2E-08 52.4 3.1 71 157-251 3-74 (82)
351 3dxb_A Thioredoxin N-terminall 96.6 0.0022 7.4E-08 60.9 5.9 84 278-364 30-117 (222)
352 3tjj_A Peroxiredoxin-4; thiore 96.6 0.0037 1.3E-07 60.9 7.7 98 152-252 90-218 (254)
353 3q6o_A Sulfhydryl oxidase 1; p 96.6 0.0037 1.3E-07 60.1 7.2 84 279-363 31-125 (244)
354 2kuc_A Putative disulphide-iso 96.6 0.0031 1.1E-07 53.9 6.0 67 299-365 55-121 (130)
355 1nho_A Probable thioredoxin; b 96.6 0.0051 1.7E-07 48.1 6.8 69 288-363 15-83 (85)
356 2wz9_A Glutaredoxin-3; protein 96.5 0.0052 1.8E-07 54.5 7.6 97 262-364 17-117 (153)
357 3hz8_A Thiol:disulfide interch 96.5 0.00067 2.3E-08 63.2 1.5 43 152-194 23-65 (193)
358 2yzh_A Probable thiol peroxida 96.5 0.0011 3.7E-08 60.1 2.7 62 152-220 46-108 (171)
359 3emx_A Thioredoxin; structural 96.5 0.0038 1.3E-07 54.2 6.1 69 292-363 49-124 (135)
360 2pwj_A Mitochondrial peroxired 96.5 0.0014 4.9E-08 59.7 3.5 61 153-219 44-108 (171)
361 3gv1_A Disulfide interchange p 96.5 0.0017 6E-08 57.8 3.9 87 151-252 12-137 (147)
362 3nzn_A Glutaredoxin; structura 96.4 0.0031 1.1E-07 52.2 5.0 75 154-249 21-101 (103)
363 2khp_A Glutaredoxin; thioredox 96.4 0.0011 3.9E-08 53.4 2.2 57 156-226 7-64 (92)
364 1xfl_A Thioredoxin H1; AT3G510 96.4 0.0067 2.3E-07 51.8 7.2 81 278-363 38-122 (124)
365 3a2v_A Probable peroxiredoxin; 96.4 0.0017 5.9E-08 63.1 3.5 88 155-252 36-160 (249)
366 2fwh_A Thiol:disulfide interch 96.4 0.007 2.4E-07 52.3 7.1 65 297-362 57-125 (134)
367 2wfc_A Peroxiredoxin 5, PRDX5; 96.3 0.0025 8.6E-08 57.9 4.2 56 152-207 30-89 (167)
368 3zrd_A Thiol peroxidase; oxido 96.3 0.0022 7.4E-08 60.1 3.7 60 152-218 77-137 (200)
369 1psq_A Probable thiol peroxida 96.3 0.0011 3.9E-08 59.5 1.7 55 152-207 41-96 (163)
370 1ti3_A Thioredoxin H, PTTRXH1; 96.3 0.0067 2.3E-07 50.1 6.3 91 268-363 15-110 (113)
371 2yj7_A LPBCA thioredoxin; oxid 95.3 0.00066 2.3E-08 55.4 0.0 81 279-362 20-104 (106)
372 3gix_A Thioredoxin-like protei 96.3 0.0076 2.6E-07 53.5 7.0 93 268-363 14-119 (149)
373 3l9v_A Putative thiol-disulfid 96.3 0.00065 2.2E-08 63.1 -0.1 42 153-194 14-58 (189)
374 2pu9_C TRX-F, thioredoxin F-ty 96.2 0.014 4.7E-07 48.3 8.0 96 262-363 10-109 (111)
375 3uma_A Hypothetical peroxiredo 96.2 0.0027 9.1E-08 58.8 3.8 55 153-207 56-114 (184)
376 3fk8_A Disulphide isomerase; A 96.2 0.0048 1.7E-07 53.0 5.1 84 279-362 30-130 (133)
377 2ec4_A FAS-associated factor 1 96.2 0.014 4.8E-07 53.7 8.3 96 151-252 53-166 (178)
378 3cxg_A Putative thioredoxin; m 96.2 0.01 3.4E-07 51.4 7.0 90 268-363 31-127 (133)
379 3bj5_A Protein disulfide-isome 96.1 0.048 1.6E-06 48.3 11.4 117 255-374 12-137 (147)
380 2dbc_A PDCL2, unnamed protein 96.1 0.0081 2.8E-07 52.2 6.2 90 268-364 20-120 (135)
381 3feu_A Putative lipoprotein; a 96.1 0.0018 6.3E-08 59.8 2.0 40 153-194 22-61 (185)
382 3mng_A Peroxiredoxin-5, mitoch 96.1 0.0044 1.5E-07 56.7 4.4 56 152-207 42-101 (173)
383 1faa_A Thioredoxin F; electron 96.0 0.018 6.1E-07 48.6 7.9 96 262-363 23-122 (124)
384 2lqo_A Putative glutaredoxin R 96.0 0.0094 3.2E-07 48.6 5.8 78 156-252 5-82 (92)
385 3evi_A Phosducin-like protein 96.0 0.008 2.7E-07 51.3 5.4 79 279-364 24-113 (118)
386 3rhb_A ATGRXC5, glutaredoxin-C 96.0 0.0026 9E-08 53.5 2.3 62 149-226 15-81 (113)
387 2trc_P Phosducin, MEKA, PP33; 96.0 0.0049 1.7E-07 58.6 4.4 92 268-364 110-212 (217)
388 3d22_A TRXH4, thioredoxin H-ty 95.9 0.0078 2.7E-07 52.1 5.3 81 279-364 47-131 (139)
389 3qmx_A Glutaredoxin A, glutare 95.9 0.0048 1.6E-07 50.9 3.7 61 152-226 13-75 (99)
390 1wou_A Thioredoxin -related pr 95.9 0.013 4.3E-07 49.9 6.3 69 292-362 49-122 (123)
391 3p7x_A Probable thiol peroxida 95.9 0.0028 9.4E-08 57.1 2.1 61 152-220 45-106 (166)
392 1qgv_A Spliceosomal protein U5 95.9 0.0076 2.6E-07 53.0 4.9 84 278-363 23-119 (142)
393 2vm1_A Thioredoxin, thioredoxi 95.8 0.011 3.9E-07 49.1 5.7 80 279-363 29-112 (118)
394 1wik_A Thioredoxin-like protei 95.8 0.005 1.7E-07 51.6 3.2 68 144-227 6-79 (109)
395 1wmj_A Thioredoxin H-type; str 95.7 0.0098 3.3E-07 50.5 5.0 91 268-363 25-120 (130)
396 2lst_A Thioredoxin; structural 94.7 0.0017 5.9E-08 55.6 0.0 85 278-362 19-113 (130)
397 2f51_A Thioredoxin; electron t 95.7 0.012 4.1E-07 49.7 5.3 84 279-366 24-114 (118)
398 1zzo_A RV1677; thioredoxin fol 95.5 0.026 8.8E-07 47.8 6.9 68 293-362 44-132 (136)
399 3erw_A Sporulation thiol-disul 95.5 0.018 6.2E-07 49.4 5.9 42 320-361 104-145 (145)
400 2b5x_A YKUV protein, TRXY; thi 95.5 0.03 1E-06 48.2 7.2 70 293-362 48-142 (148)
401 1lu4_A Soluble secreted antige 95.4 0.03 1E-06 47.5 7.0 68 293-362 43-133 (136)
402 2v2g_A Peroxiredoxin 6; oxidor 95.3 0.025 8.5E-07 54.3 6.6 96 154-252 30-163 (233)
403 1a0r_P Phosducin, MEKA, PP33; 95.3 0.02 6.9E-07 55.4 5.9 92 268-364 123-225 (245)
404 3msz_A Glutaredoxin 1; alpha-b 95.1 0.0085 2.9E-07 47.5 2.3 80 156-252 5-85 (89)
405 1ilo_A Conserved hypothetical 95.0 0.047 1.6E-06 41.6 6.3 70 281-360 3-76 (77)
406 1hyu_A AHPF, alkyl hydroperoxi 94.9 0.19 6.7E-06 53.8 12.9 175 153-363 18-198 (521)
407 2lja_A Putative thiol-disulfid 94.8 0.098 3.4E-06 45.3 8.6 86 278-363 30-141 (152)
408 2f9s_A Thiol-disulfide oxidore 94.7 0.059 2E-06 46.9 6.8 85 279-363 27-136 (151)
409 3qcp_A QSOX from trypanosoma b 94.7 0.0095 3.2E-07 63.0 1.7 89 262-354 28-129 (470)
410 1prx_A HORF6; peroxiredoxin, h 94.6 0.033 1.1E-06 53.0 5.3 42 155-196 34-76 (224)
411 2l5o_A Putative thioredoxin; s 94.6 0.12 3.9E-06 45.0 8.5 44 320-363 96-139 (153)
412 3dml_A Putative uncharacterize 94.4 0.039 1.3E-06 46.9 4.6 56 307-363 53-108 (116)
413 3ctg_A Glutaredoxin-2; reduced 94.2 0.0076 2.6E-07 52.3 -0.2 70 144-226 28-102 (129)
414 4evm_A Thioredoxin family prot 94.1 0.12 3.9E-06 43.5 7.1 43 320-362 94-136 (138)
415 3raz_A Thioredoxin-related pro 93.9 0.12 4.2E-06 44.9 7.2 43 320-362 93-137 (151)
416 3l9s_A Thiol:disulfide interch 93.6 0.018 6.2E-07 53.3 1.2 42 153-194 21-65 (191)
417 2ju5_A Thioredoxin disulfide i 93.5 0.16 5.6E-06 44.7 7.3 43 320-363 106-150 (154)
418 3fkf_A Thiol-disulfide oxidore 93.5 0.24 8.4E-06 42.3 8.3 81 279-362 34-143 (148)
419 4hde_A SCO1/SENC family lipopr 93.3 0.39 1.3E-05 43.1 9.6 43 152-194 31-77 (170)
420 3hcz_A Possible thiol-disulfid 93.1 0.38 1.3E-05 41.1 8.9 79 278-358 31-139 (148)
421 3ia1_A THIO-disulfide isomeras 93.1 0.11 3.8E-06 45.2 5.4 45 319-363 98-142 (154)
422 1xcc_A 1-Cys peroxiredoxin; un 93.1 0.1 3.6E-06 49.3 5.5 95 155-252 34-164 (220)
423 3h8q_A Thioredoxin reductase 3 93.0 0.042 1.4E-06 46.3 2.4 65 146-226 10-78 (114)
424 3gl3_A Putative thiol:disulfid 92.7 0.3 1E-05 42.1 7.7 44 321-364 96-141 (152)
425 3lor_A Thiol-disulfide isomera 92.6 0.33 1.1E-05 42.3 7.9 41 322-362 112-152 (160)
426 3or5_A Thiol:disulfide interch 92.6 0.25 8.5E-06 43.3 7.1 37 327-363 113-149 (165)
427 3eyt_A Uncharacterized protein 92.3 0.33 1.1E-05 42.2 7.4 43 321-363 108-150 (158)
428 2h30_A Thioredoxin, peptide me 92.0 0.3 1E-05 42.7 6.9 44 320-363 111-154 (164)
429 4dvc_A Thiol:disulfide interch 91.4 0.069 2.4E-06 48.2 1.9 38 152-189 20-57 (184)
430 3keb_A Probable thiol peroxida 91.2 0.12 4.2E-06 49.1 3.5 52 152-207 47-104 (224)
431 3kp8_A Vkorc1/thioredoxin doma 91.2 0.082 2.8E-06 43.8 2.0 38 319-362 55-92 (106)
432 1kng_A Thiol:disulfide interch 91.1 0.29 1E-05 42.4 5.7 43 320-362 107-149 (156)
433 3hdc_A Thioredoxin family prot 90.8 0.52 1.8E-05 41.2 7.2 87 279-365 42-152 (158)
434 2dlx_A UBX domain-containing p 90.5 1.6 5.5E-05 38.6 10.0 57 305-362 76-133 (153)
435 3l4n_A Monothiol glutaredoxin- 90.5 0.079 2.7E-06 45.7 1.3 68 145-226 6-78 (127)
436 2lrn_A Thiol:disulfide interch 90.5 0.67 2.3E-05 40.1 7.5 41 319-362 98-138 (152)
437 3kcm_A Thioredoxin family prot 90.1 0.56 1.9E-05 40.5 6.6 42 321-362 97-140 (154)
438 4f82_A Thioredoxin reductase; 90.0 0.14 4.7E-06 46.8 2.6 55 153-207 48-105 (176)
439 3lwa_A Secreted thiol-disulfid 89.8 0.73 2.5E-05 41.3 7.3 84 278-362 59-178 (183)
440 3ha9_A Uncharacterized thiored 89.5 0.81 2.8E-05 40.1 7.3 40 321-362 121-161 (165)
441 3f9u_A Putative exported cytoc 89.0 0.23 8E-06 44.3 3.3 40 323-362 123-163 (172)
442 3c7m_A Thiol:disulfide interch 88.9 0.19 6.4E-06 45.8 2.6 41 152-192 16-57 (195)
443 2b1k_A Thiol:disulfide interch 88.3 0.58 2E-05 41.2 5.5 43 320-362 115-157 (168)
444 3fw2_A Thiol-disulfide oxidore 87.9 1.4 4.8E-05 37.9 7.6 39 321-362 107-145 (150)
445 2fgx_A Putative thioredoxin; N 87.9 0.27 9.2E-06 41.0 2.7 61 292-360 46-106 (107)
446 2axo_A Hypothetical protein AT 87.8 0.79 2.7E-05 44.6 6.3 83 155-252 44-141 (270)
447 1nm3_A Protein HI0572; hybrid, 86.7 0.39 1.3E-05 45.6 3.5 57 154-222 169-225 (241)
448 2ct6_A SH3 domain-binding glut 86.3 0.58 2E-05 38.9 3.9 56 156-226 9-80 (111)
449 3kh7_A Thiol:disulfide interch 85.1 1.3 4.5E-05 39.6 6.0 43 320-362 122-164 (176)
450 3s9f_A Tryparedoxin; thioredox 85.0 0.97 3.3E-05 40.0 5.0 63 278-340 48-138 (165)
451 2wci_A Glutaredoxin-4; redox-a 84.9 0.36 1.2E-05 42.0 2.0 58 155-226 36-98 (135)
452 2cvb_A Probable thiol-disulfid 84.7 1.6 5.5E-05 39.2 6.4 42 320-363 106-157 (188)
453 1sen_A Thioredoxin-like protei 84.6 0.27 9.2E-06 43.9 1.1 83 279-362 47-145 (164)
454 2hyx_A Protein DIPZ; thioredox 84.2 1.2 4.3E-05 45.0 6.0 43 320-362 154-196 (352)
455 1o73_A Tryparedoxin; electron 83.9 1.1 3.8E-05 38.0 4.8 63 279-341 29-120 (144)
456 2ywi_A Hypothetical conserved 83.9 1.2 4.3E-05 40.1 5.4 44 320-363 120-172 (196)
457 1o8x_A Tryparedoxin, TRYX, TXN 83.9 1.2 4.1E-05 38.1 5.0 64 278-341 28-120 (146)
458 1aba_A Glutaredoxin; electron 83.4 0.64 2.2E-05 36.5 2.8 57 157-226 2-73 (87)
459 2ggt_A SCO1 protein homolog, m 82.7 1.9 6.4E-05 37.4 5.9 42 321-362 102-158 (164)
460 1i5g_A Tryparedoxin II; electr 82.6 1.3 4.5E-05 37.7 4.7 63 279-341 29-120 (144)
461 1xiy_A Peroxiredoxin, pfaop; a 82.1 1.3 4.3E-05 40.5 4.5 55 153-207 43-102 (182)
462 3zyw_A Glutaredoxin-3; metal b 81.7 0.71 2.4E-05 38.5 2.5 55 158-226 19-79 (111)
463 1jfu_A Thiol:disulfide interch 81.7 3.5 0.00012 36.7 7.5 69 294-362 80-177 (186)
464 2rli_A SCO2 protein homolog, m 81.2 3.4 0.00012 36.1 7.1 42 321-362 105-161 (171)
465 1t1v_A SH3BGRL3, SH3 domain-bi 81.1 1.6 5.4E-05 34.7 4.3 57 157-226 4-68 (93)
466 3sbc_A Peroxiredoxin TSA1; alp 81.0 1.1 3.9E-05 42.1 3.9 53 152-204 51-105 (216)
467 3tue_A Tryparedoxin peroxidase 79.9 2.5 8.7E-05 39.7 5.9 54 152-205 55-110 (219)
468 2lrt_A Uncharacterized protein 79.8 3.4 0.00012 35.7 6.5 34 322-355 105-138 (152)
469 3gha_A Disulfide bond formatio 79.2 0.82 2.8E-05 42.3 2.3 42 152-193 28-72 (202)
470 2xhf_A Peroxiredoxin 5; oxidor 79.1 2.8 9.5E-05 37.8 5.7 56 152-207 41-99 (171)
471 1ttz_A Conserved hypothetical 79.1 1.8 6.3E-05 34.2 4.0 47 309-363 29-75 (87)
472 2pzi_A Probable serine/threoni 78.5 2 6.7E-05 47.4 5.5 49 33-86 625-675 (681)
473 3ipz_A Monothiol glutaredoxin- 78.0 1.2 4.2E-05 36.7 2.8 50 163-226 31-81 (109)
474 2wem_A Glutaredoxin-related pr 76.5 1.2 4.2E-05 37.6 2.4 51 163-226 33-84 (118)
475 3f4s_A Alpha-DSBA1, putative u 76.1 1.3 4.4E-05 41.9 2.7 41 152-192 38-81 (226)
476 3gx8_A Monothiol glutaredoxin- 75.9 2.1 7.3E-05 36.1 3.8 51 163-226 29-82 (121)
477 3kp9_A Vkorc1/thioredoxin doma 75.7 0.83 2.8E-05 45.1 1.2 71 282-362 202-277 (291)
478 1wjk_A C330018D20RIK protein; 75.3 11 0.00037 30.2 7.9 53 305-363 42-94 (100)
479 3gn3_A Putative protein-disulf 74.5 1.1 3.8E-05 40.8 1.7 32 151-182 12-43 (182)
480 3ewl_A Uncharacterized conserv 74.3 3.6 0.00012 34.6 4.9 37 324-363 103-139 (142)
481 3ph9_A Anterior gradient prote 73.1 1.1 3.7E-05 39.7 1.2 53 308-361 79-138 (151)
482 3eur_A Uncharacterized protein 72.4 5.3 0.00018 33.7 5.6 37 322-361 105-141 (142)
483 4eo3_A Bacterioferritin comigr 72.2 1.9 6.7E-05 43.0 3.0 94 152-252 23-137 (322)
484 1z6n_A Hypothetical protein PA 69.8 3.1 0.00011 37.2 3.5 79 279-362 55-140 (167)
485 2k6v_A Putative cytochrome C o 69.0 4.5 0.00015 35.2 4.4 33 329-362 136-170 (172)
486 3cmi_A Peroxiredoxin HYR1; thi 66.2 13 0.00046 32.3 7.0 38 325-362 122-165 (171)
487 1zof_A Alkyl hydroperoxide-red 66.1 9.4 0.00032 34.4 6.1 43 320-362 107-158 (198)
488 3gmf_A Protein-disulfide isome 65.0 2.6 9E-05 39.0 2.1 37 321-363 158-195 (205)
489 3bci_A Disulfide bond protein 65.0 2.9 0.0001 37.5 2.3 31 152-182 10-41 (186)
490 3u5r_E Uncharacterized protein 64.5 12 0.00039 34.6 6.5 70 292-363 77-185 (218)
491 1we0_A Alkyl hydroperoxide red 63.1 16 0.00056 32.4 7.1 43 320-362 102-154 (187)
492 2bmx_A Alkyl hydroperoxidase C 61.8 15 0.00053 32.9 6.7 44 320-363 116-168 (195)
493 2in3_A Hypothetical protein; D 60.9 6.9 0.00024 35.8 4.2 42 202-253 168-209 (216)
494 3tdg_A DSBG, putative uncharac 60.1 2.8 9.4E-05 40.8 1.2 28 152-179 146-173 (273)
495 2vup_A Glutathione peroxidase- 58.5 18 0.00062 32.2 6.5 36 327-362 141-182 (190)
496 2e7p_A Glutaredoxin; thioredox 57.7 9.8 0.00033 30.8 4.2 41 320-363 63-106 (116)
497 2p5q_A Glutathione peroxidase 56.5 19 0.00066 30.9 6.2 34 329-362 129-165 (170)
498 4fo5_A Thioredoxin-like protei 55.8 10 0.00035 31.9 4.1 40 320-362 103-142 (143)
499 2lus_A Thioredoxion; CR-Trp16, 59.1 2.7 9.2E-05 35.4 0.0 22 320-341 98-119 (143)
500 3ira_A Conserved protein; meth 53.9 7.2 0.00025 35.1 2.9 42 299-342 67-116 (173)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=3.7e-46 Score=425.86 Aligned_cols=372 Identities=20% Similarity=0.296 Sum_probs=250.7
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccchhhhhhhhhh
Q 009206 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKV 111 (540)
Q Consensus 35 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~ 111 (540)
...|||++|||+++|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||++|..+.....
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~--- 95 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ--- 95 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC---
Confidence 36799999999999999999999999999999999863 567899999999999999999999999998765442
Q ss_pred ccccCCccccccCCCCCCCCCCCcceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeee
Q 009206 112 REQYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMV 191 (540)
Q Consensus 112 ~~~~~~~~f~~~~f~~~~~~~~~~~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~V 191 (540)
++++..|+|++..||+|+++ +.|..||.++|++.++++++|||+||||||+||+++.|.|+++|+.+++.+.+++|
T Consensus 96 ~~~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~v 171 (780)
T 3apo_A 96 GGQYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAV 171 (780)
T ss_dssp --------CCSSSSSTTTTC----TTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEE
T ss_pred CCCcccccccchhhcccCCC----cceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEE
Confidence 55678889988889988765 36899999999999999999999999999999999999999999999988899999
Q ss_pred eccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccc---hhh
Q 009206 192 ELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKE---SMG 268 (540)
Q Consensus 192 dc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~---~~~ 268 (540)
||++++. +|++++ |+++||+++|++|.. ..+|.|.++.+.|++|+.+.+ .|....+++. +.+
T Consensus 172 d~~~~~~---l~~~~~------v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~--~~~~~~i~~~~~~~~l 236 (780)
T 3apo_A 172 NCGDDRM---LCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV--RSTVTELSTGNFVNAI 236 (780)
T ss_dssp ETTTCSS---CC--------------CEEEEECTTSC----CEECCSCSCHHHHHHHHHTTS--CCCEEECCHHHHHHHH
T ss_pred eCCCcHH---HHHHcC------CceeeeEEEEeCCcE----eeEecCCCCHHHHHHHHHHhc--hhhheeccchhhHHHH
Confidence 9997765 889988 999999999999864 578999999999999999983 3344445443 235
Q ss_pred hhhhhhcCCCceEEEEEeCCCC-CCc-HHHHHHHHhhccCceEEEEE---------------------------------
Q 009206 269 KNFLAKTGPHKVKVIFFSKTGE-RAS-PFVRQISRNYWAYASFAFVL--------------------------------- 313 (540)
Q Consensus 269 ~~fl~~~~~~~~~vv~f~~~~~-~~~-~~~~~~A~~~~~~~~f~~v~--------------------------------- 313 (540)
+.|+.. +.+.|++|.++.+ ++. ..++.++..|++.+.|+++.
T Consensus 237 ~~~~~~---~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~ 313 (780)
T 3apo_A 237 ETAFAA---GVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKS 313 (780)
T ss_dssp HHHHHH---TCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGG
T ss_pred Hhhhcc---CCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCccc
Confidence 666654 3466777765432 222 34444555554444444331
Q ss_pred -------------------------------------------------------------------------eeccc-c
Q 009206 314 -------------------------------------------------------------------------WREEE-S 319 (540)
Q Consensus 314 -------------------------------------------------------------------------~~~~~-~ 319 (540)
+.++. .
T Consensus 314 ~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~ 393 (780)
T 3apo_A 314 SVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSA 393 (780)
T ss_dssp GSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGC
T ss_pred ceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCc
Confidence 11121 2
Q ss_pred HHHHHHcCCCCCCEEEEEeCCC-CceeeecCCCChhHHHHHHHhhccCCCccccccchhhhccCCCCCCCCCCCCceeEE
Q 009206 320 SIWWNTFEVESAPAIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYC 398 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~-~~~~~y~G~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lc 398 (540)
..++++|+++. |++++|+..+ +.+..|+|..+.+.|.+|+..+..+.+.+++..+..+. . ++ .++
T Consensus 394 ~~~~~~~~~~~-p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~~v~~l~~~~~~~~---~------~~----~vl 459 (780)
T 3apo_A 394 PGICSDLYVFQ-PSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNSHVTTLGPQNFPAS---D------KE----PWL 459 (780)
T ss_dssp HHHHHHTTCCS-CEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTSCEEECCTTTSCTT---C------CS----CEE
T ss_pred hhhHhhccccC-ChhhhccCCCcceeeecccHhhHHHHHHHhhhccCCCCEecCHHHHHHc---C------CC----eEE
Confidence 56889999975 9999999877 55778999999999999999999999999998886442 1 11 243
Q ss_pred EEEecCCChhhHHHHHHHHHHHHhhccccccccccccCCchHHHHhccCCceEEEEEechhhHHHHHhhc
Q 009206 399 VILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFYL 468 (540)
Q Consensus 399 vi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~f~wvd~~~q~~f~~~~~ 468 (540)
|.+...--.....+...+.++++ .+++ .+.|++||.+...++++.|.
T Consensus 460 v~F~a~wC~~c~~~~p~~~~~a~----------------------~~~~-~v~~~~vd~~~~~~~~~~~~ 506 (780)
T 3apo_A 460 VDFFAPWSPPSRALLPELRKAST----------------------LLYG-QLKVGTLDCTIHEGLCNMYN 506 (780)
T ss_dssp EEEECTTCHHHHHHHHHHHHHHH----------------------HTTT-TCEEEEEETTTCHHHHHHTT
T ss_pred EEEECCCCHHHHHHhHHHHHHHH----------------------HhcC-CeEEEEEeCCCCHHHHHHcC
Confidence 44444333345556666666665 5654 49999999998888888873
No 2
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=8.7e-39 Score=307.92 Aligned_cols=197 Identities=26% Similarity=0.504 Sum_probs=174.5
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccchhhhhhhhhhcc
Q 009206 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVRE 113 (540)
Q Consensus 37 ~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~~~ 113 (540)
.|||++|||+++|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||++|..+.... .++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~---~~~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN---QGG 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT---CSC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc---ccc
Confidence 489999999999999999999999999999999863 56789999999999999999999999998875543 245
Q ss_pred ccCCccccccCCCCCCCCCCCcceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeec
Q 009206 114 QYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (540)
Q Consensus 114 ~~~~~~f~~~~f~~~~~~~~~~~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc 193 (540)
++..|.|+...|++|..+ ..|..++.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||
T Consensus 79 ~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~ 154 (210)
T 3apq_A 79 QYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNC 154 (210)
T ss_dssp CCCCHHHHHHSSSTTTTC----TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred cccccccccccccccCCC----CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 566777777778877655 3578899999999998899999999999999999999999999999988889999999
Q ss_pred cchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 194 GDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 194 ~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
++++. +|++++ |.++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 155 ~~~~~---l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 155 GDDRM---LCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp TTCHH---HHHHTT------CCSSSEEEEECTTSC----CEECCSCCCHHHHHHHHHHHH
T ss_pred CccHH---HHHHcC------CCcCCeEEEEECCCc----eeEecCCCCHHHHHHHHHHhC
Confidence 97665 899999 999999999988864 577899999999999999874
No 3
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=3.8e-35 Score=306.41 Aligned_cols=282 Identities=15% Similarity=0.190 Sum_probs=218.1
Q ss_pred CCCCCCCCCCCcceeEEeCCCCccccccCCCcEEEEEEecCCCCc---cCCh---HHHHHHHHHHhcc-cceeeeeccch
Q 009206 124 DLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLC---GQFS---GAWKTIAALLEGI-ANTGMVELGDI 196 (540)
Q Consensus 124 ~f~~~~~~~~~~~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C---~~l~---p~~~~~A~~l~~~-~~v~~Vdc~~~ 196 (540)
+|+.|++. +.|.+||.+||+++|.++++|||+||||||+|| ++++ |+|+++|+.+++. +.+++|||+++
T Consensus 5 ~~p~~~~~----~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~ 80 (367)
T 3us3_A 5 DFPEYDGV----DRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKD 80 (367)
T ss_dssp CCCCCCCC----CCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTT
T ss_pred CCCCCCCC----CccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCccc
Confidence 34545443 468999999999999889999999999999997 3333 7999999999875 69999999976
Q ss_pred hhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcC
Q 009206 197 RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTG 276 (540)
Q Consensus 197 ~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~ 276 (540)
+. ||++++ |++||||++|++|. ...|.|.++.++|++|+.+++ .|.+..+++.+.++.|+...
T Consensus 81 ~~---l~~~~~------V~~~PTl~~f~~G~-----~~~y~G~~~~~~i~~~i~~~~--~~~v~~i~~~~~~~~~~~~~- 143 (367)
T 3us3_A 81 AA---VAKKLG------LTEEDSIYVFKEDE-----VIEYDGEFSADTLVEFLLDVL--EDPVELIEGERELQAFENIE- 143 (367)
T ss_dssp HH---HHHHHT------CCSTTEEEEEETTE-----EEECCSCCSHHHHHHHHHHHH--SCSEEECCSHHHHHHHHHCC-
T ss_pred HH---HHHHcC------CCcCceEEEEECCc-----EEEeCCCCCHHHHHHHHHHhc--CCCcEEcCCHHHHHHHhccC-
Confidence 65 999999 99999999999885 368999999999999999983 56565565544478888621
Q ss_pred CCceEEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-CChhH
Q 009206 277 PHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSR 355 (540)
Q Consensus 277 ~~~~~vv~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~-~~~~~ 355 (540)
...++|.||.+.+....+.+..+|..+++.+.|+.+. ...++++|+|+ .|+|++|++++..++.|.|. ++.+.
T Consensus 144 ~~~~vv~ff~~~~~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~v~-~p~i~lf~~~~~~~~~y~g~~~~~~~ 217 (367)
T 3us3_A 144 DEIKLIGYFKNKDSEHYKAFKEAAEEFHPYIPFFATF-----DSKVAKKLTLK-LNEIDFYEAFMEEPVTIPDKPNSEEE 217 (367)
T ss_dssp SSCEEEEECSCTTCHHHHHHHHHHHHHTTTSCEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHH
T ss_pred CCcEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEC-----CHHHHHHcCCC-CCeEEEEcCCCCCCeecCCCCCCHHH
Confidence 1234455565544444567788999998889998874 34699999997 59999999988888999995 89999
Q ss_pred HHHHHHhhccCCCccccccchhhhccCCCCCCCCCCCCceeEEEEEecC-CChhhHHHHHHHHHHHHhhccccccccccc
Q 009206 356 LSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMRETIRRVQETLLSDDESNAADT 434 (540)
Q Consensus 356 l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 434 (540)
|.+||..+.+|++++++..+..+..+.. ..+ .+|+ ++.+ ...+.+++.+.++.+|+
T Consensus 218 l~~fi~~~~~p~v~elt~~~~~~~~~~~-----~~~----~~~~-~f~~~~~~~~~~~~~~l~~vA~------------- 274 (367)
T 3us3_A 218 IVNFVEEHRRSTLRKLKPESMYETWEDD-----MDG----IHIV-AFAEEADPDGYEFLEILKSVAQ------------- 274 (367)
T ss_dssp HHHHHHHTCSCSEEECCGGGHHHHHHSC-----BTT----EEEE-EECCTTSHHHHHHHHHHHHHHH-------------
T ss_pred HHHHHHHcCccceeecChhhHHHHHhhc-----cCC----cEEE-EEEcCCChhHHHHHHHHHHHHH-------------
Confidence 9999999999999999999976643311 001 2444 4544 34456677777777776
Q ss_pred cCCchHHHHhccCC-ceEEEEEechhhHHHH
Q 009206 435 DQSLAPAAVAFRNK-RLTFAWLDGEAQDRYC 464 (540)
Q Consensus 435 ~~~~~~~A~~~~~~-~~~f~wvd~~~q~~f~ 464 (540)
.++++ .+.|+|+|+..+...+
T Consensus 275 ---------~~~~~~ki~F~~id~~~~~~~l 296 (367)
T 3us3_A 275 ---------DNTDNPDLSIIWIDPDDFPLLV 296 (367)
T ss_dssp ---------HTTTCTTCCEEEECGGGCTTTH
T ss_pred ---------HcCCCCceEEEEECCccchhHH
Confidence 66664 6999999998877554
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=2.5e-34 Score=298.19 Aligned_cols=297 Identities=14% Similarity=0.162 Sum_probs=229.4
Q ss_pred CCCCCCCCCCCcceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHH-------HHHHHHHHhcc-cceeeeeccc
Q 009206 124 DLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGA-------WKTIAALLEGI-ANTGMVELGD 195 (540)
Q Consensus 124 ~f~~~~~~~~~~~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~-------~~~~A~~l~~~-~~v~~Vdc~~ 195 (540)
.+|.+++. +.|.+||.++|++.+.++++|||+||||||+ |++++|. |+++|+.+++. +.+++|||++
T Consensus 3 ~~p~~~~~----~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~ 77 (350)
T 1sji_A 3 NFPTYDGK----DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK 77 (350)
T ss_dssp SSCCCCCC----CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT
T ss_pred CCCCCCCC----CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC
Confidence 34544443 3589999999999998899999999999999 9999999 99999999875 6999999997
Q ss_pred hhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhh-h
Q 009206 196 IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLA-K 274 (540)
Q Consensus 196 ~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~-~ 274 (540)
++. +|++++ |++|||+++|++|. ...|.|.++.++|++|+.+.+ .|.+..+++.+.++.|+. .
T Consensus 78 ~~~---l~~~~~------v~~~Pt~~~~~~g~-----~~~~~G~~~~~~l~~~i~~~~--~~~~~~l~~~~~~~~~~~~~ 141 (350)
T 1sji_A 78 EAK---LAKKLG------FDEEGSLYVLKGDR-----TIEFDGEFAADVLVEFLLDLI--EDPVEIINSKLEVQAFERIE 141 (350)
T ss_dssp THH---HHHHHT------CCSTTEEEEEETTE-----EEEECSCCCHHHHHHHHHTTS--SCSEEECCSHHHHHHHHHCC
T ss_pred CHH---HHHhcC------CCccceEEEEECCc-----EEEecCCCCHHHHHHHHHHhc--CCcceeccchHHHHHHhccC
Confidence 665 999999 99999999999885 368999999999999999883 455555654444778876 4
Q ss_pred cCCCceEEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-CCh
Q 009206 275 TGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNN 353 (540)
Q Consensus 275 ~~~~~~~vv~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~-~~~ 353 (540)
.. .++|.+|.+.+....+.+..+|..+++.+.|+.+. .+.++++|+++ .|+|++|++.+..++.|+|. ++.
T Consensus 142 ~~--~~vv~ff~~~~~~~~~~~~~~A~~~~~~~~f~~~~-----~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~ 213 (350)
T 1sji_A 142 DQ--IKLIGFFKSEESEYYKAFEEAAEHFQPYIKFFATF-----DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTE 213 (350)
T ss_dssp SS--CEEEEECSCTTSHHHHHHHHHHHHTTTTSEEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCH
T ss_pred CC--cEEEEEECCCCcHHHHHHHHHHHhhccCcEEEEEC-----CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCH
Confidence 32 34444555544334567788999998889888873 34699999998 99999999887888899997 899
Q ss_pred hHHHHHHHhhccCCCccccccchhhhccCCCCCCCCCCCCceeEEEEEecCC-ChhhHHHHHHHHHHHHhhccccccccc
Q 009206 354 SRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL-SPELNKMRETIRRVQETLLSDDESNAA 432 (540)
Q Consensus 354 ~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~ 432 (540)
++|.+||..+..|++++++..+..+ .|.. .. ..+|++++... ..+..+.++.++++|+
T Consensus 214 ~~l~~fi~~~~~p~v~elt~~~~~~-~~~~-----~~----~~~~~l~f~~~~~~~~~~~~~~~~~vA~----------- 272 (350)
T 1sji_A 214 EELVEFVKEHQRPTLRRLRPEDMFE-TWED-----DL----NGIHIVAFAERSDPDGYEFLEILKQVAR----------- 272 (350)
T ss_dssp HHHHHHHHHHCCCSEEECCTTTHHH-HHHS-----CS----SSEEEEEECCTTSHHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHcCccchhhcChhhHHH-HhcC-----CC----CCcEEEEEEcCCCccHHHHHHHHHHHHH-----------
Confidence 9999999999999999999999755 3421 00 02666666543 3334566777777766
Q ss_pred cccCCchHHHHhcc-CCceEEEEEechhhHHHH----HhhccCCccccccCCccCCCCCCeEEEEEe
Q 009206 433 DTDQSLAPAAVAFR-NKRLTFAWLDGEAQDRYC----SFYLFSETSFETCGARRDMSDVPRLFIVRY 494 (540)
Q Consensus 433 ~~~~~~~~~A~~~~-~~~~~f~wvd~~~q~~f~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 494 (540)
+++ ++++.|+|+|++.+..++ +.|..+. +.|.++++..
T Consensus 273 -----------~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~-------------~~P~~~i~~~ 315 (350)
T 1sji_A 273 -----------DNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDL-------------FKPQIGVVNV 315 (350)
T ss_dssp -----------HGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCT-------------TSCEEEEEES
T ss_pred -----------HhCCCCceEEEEECchhhHHHHHHHHhhcCCCc-------------cCCcEEEEec
Confidence 555 356999999999888877 5553221 3488888753
No 5
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.98 E-value=2.5e-31 Score=286.88 Aligned_cols=277 Identities=15% Similarity=0.198 Sum_probs=214.6
Q ss_pred eeEEeCCCCccccccCC---CcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFHDS---KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~---~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.|.+||.++|++.+.++ ++|+|.||||||+||+++.|.|+++|+.+++.+.+++|||++++. +|++++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~---l~~~~~------ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTN---TCNKYG------ 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHH---HHHHTT------
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHH---HHHhcC------
Confidence 47899999999999766 999999999999999999999999999999888999999997665 999999
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEE-EEeCCCCCC
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTGERA 292 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv-~f~~~~~~~ 292 (540)
|+++|||++|++|.. ...|.|.++.+.|++|+.+.+ .|....+++.+.++.|+... .+.+| +|.+.+...
T Consensus 73 v~~~Ptl~~~~~g~~----~~~~~G~~~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~---~~~vv~~~~~~~~~~ 143 (481)
T 3f8u_A 73 VSGYPTLKIFRDGEE----AGAYDGPRTADGIVSHLKKQA--GPASVPLRTEEEFKKFISDK---DASIVGFFDDSFSEA 143 (481)
T ss_dssp CCEESEEEEEETTEE----EEECCSCSSHHHHHHHHHHHT--SCSEEEECSHHHHHHHTTSS---SCEEEEEESCTTCHH
T ss_pred CCCCCEEEEEeCCce----eeeecCccCHHHHHHHHHhhc--ccCceecCCHHHHHHHHhcC---CcEEEEEECCCccch
Confidence 999999999999854 578999999999999999983 45555555544477887753 24455 665554444
Q ss_pred cHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEe------CCCCceeeec-CCCChhHHHHHHHhhcc
Q 009206 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK------DPGVKPVVYY-GSFNNSRLSEVMEQNKL 365 (540)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk------~~~~~~~~y~-G~~~~~~l~~fi~~~~~ 365 (540)
...+..+|..+++.+.|+.+. +..++++|+++.. .|++|+ ..+..+..|+ |.++.+.|.+||..+.+
T Consensus 144 ~~~f~~~a~~~~~~~~F~~~~-----~~~~~~~~~v~~~-~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~ 217 (481)
T 3f8u_A 144 HSEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNGE-GIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF 217 (481)
T ss_dssp HHHHHHHHHHHTTTSCEEEEC-----CHHHHHHHCSSSE-EEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCceEEEEC-----CHHHHHHhCCCCC-cEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCC
Confidence 567777999998999998764 3569999999764 488888 4566778898 88899999999999999
Q ss_pred CCCccccccchhhhccCCCCCCCCCCCCceeEEEEEecCCChh----hHHHHHHHHHHHHhhccccccccccccCCchHH
Q 009206 366 QELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPE----LNKMRETIRRVQETLLSDDESNAADTDQSLAPA 441 (540)
Q Consensus 366 ~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (540)
|++++++..+..+. +.. .++++++...... .+..++.++++++.+++
T Consensus 218 p~v~e~t~~n~~~~-~~~------------~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~---------------- 268 (481)
T 3f8u_A 218 GICPHMTEDNKDLI-QGK------------DLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLD---------------- 268 (481)
T ss_dssp TTSCEECTTTHHHH-TTS------------SEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHH----------------
T ss_pred CCccccChhHHHHh-cCC------------CceEEEEecccccchhhHHHHHHHHHHHHHHhcC----------------
Confidence 99999999997552 211 2555544332111 22345667666663332
Q ss_pred HHhccCCceEEEEEechhhHHHHHhhccC
Q 009206 442 AVAFRNKRLTFAWLDGEAQDRYCSFYLFS 470 (540)
Q Consensus 442 A~~~~~~~~~f~wvd~~~q~~f~~~~~~~ 470 (540)
++..+.|+|+|++.....++.|..+
T Consensus 269 ----k~~~i~F~~~D~~~~~~~l~~~gl~ 293 (481)
T 3f8u_A 269 ----AGHKLNFAVASRKTFSHELSDFGLE 293 (481)
T ss_dssp ----TTCCCEEEEEETTTTHHHHGGGTCC
T ss_pred ----CCceEEEEEEcHHHHHHHHHHcCCC
Confidence 1234999999999888888877544
No 6
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.98 E-value=6.4e-32 Score=283.43 Aligned_cols=278 Identities=11% Similarity=0.139 Sum_probs=191.5
Q ss_pred cceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHh------cccceeeeeccchhhhhHHHHhCCC
Q 009206 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE------GIANTGMVELGDIRLATHLAERKPI 208 (540)
Q Consensus 135 ~~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~------~~~~v~~Vdc~~~~~~~~l~~~~~~ 208 (540)
.+.|..||.++|++++.++++|||+||||||+||++++|.|+++|+.++ +.+.+++|||++++. +|++++
T Consensus 4 ~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~---l~~~~~- 79 (382)
T 2r2j_A 4 GSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSD---IAQRYR- 79 (382)
T ss_dssp ----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHH---HHHHTT-
T ss_pred CCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHH---HHHhcC-
Confidence 4568899999999988888999999999999999999999999999994 446899999997655 999999
Q ss_pred CccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEeCC
Q 009206 209 GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT 288 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~ 288 (540)
|++|||+++|++|.. ....|.|.++.+.|++|+.+.+ .|.+..+++.+.++. +.. ...++|.+|.+.
T Consensus 80 -----v~~~Pt~~~f~~G~~---~~~~~~G~~~~~~l~~~i~~~~--~~~v~~l~~~~~l~~-l~~--~~~~~v~ff~~~ 146 (382)
T 2r2j_A 80 -----ISKYPTLKLFRNGMM---MKREYRGQRSVKALADYIRQQK--SDPIQEIRDLAEITT-LDR--SKRNIIGYFEQK 146 (382)
T ss_dssp -----CCEESEEEEEETTEE---EEEECCSCCSHHHHHHHHHHHH--SCCCEEC---------------CCEEEEEESCS
T ss_pred -----CCcCCEEEEEeCCcE---eeeeecCcchHHHHHHHHHHhc--cCCceecCCHHHHHH-hcC--CCCEEEEEECCC
Confidence 999999999998863 1226999999999999999984 344444443332444 332 223455566543
Q ss_pred CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCC-CCceeeecCCC-ChhHHHHHHHhhccC
Q 009206 289 GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSF-NNSRLSEVMEQNKLQ 366 (540)
Q Consensus 289 ~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~-~~~~~~y~G~~-~~~~l~~fi~~~~~~ 366 (540)
.......+..+|..+++++.|+.+.. .+++++++++.| +++++.. ...+..|.|.+ +.+.|.+||..+.+|
T Consensus 147 ~~~~~~~f~~~A~~~~~~~~F~~~~~------~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 219 (382)
T 2r2j_A 147 DSDNYRVFERVANILHDDCAFLSAFG------DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVP 219 (382)
T ss_dssp SSHHHHHHHHHHHHHTTTCEEEEEES------CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSC
T ss_pred CChhHHHHHHHHHHhhccceEEEEeh------hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccC
Confidence 22123357778999988888877753 256788998888 5444432 34567899998 899999999999999
Q ss_pred CCccccccchhhhccCCCCCCCCCCCCceeEEEEEecCCC-hhhHHHHHHHHHHHHhhccccccccccccCCchHHHHhc
Q 009206 367 ELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS-PELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAF 445 (540)
Q Consensus 367 ~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 445 (540)
++++++..+..+..|... .+|++++.... ...+..++.+ ++ .|..+
T Consensus 220 ~v~elt~~~~~~~~~~~~-----------~~~v~f~~~~~~~~~~~~~~~~---~~-------------------~~~~~ 266 (382)
T 2r2j_A 220 LVREITFENGEELTEEGL-----------PFLILFHMKEDTESLEIFQNEV---AR-------------------QLISE 266 (382)
T ss_dssp SSEECCHHHHHHHHTTCC-----------CEEEEEECTTCCHHHHHHHHHH---HH-------------------HTGGG
T ss_pred ceEecChhhHHHHhcCCC-----------cEEEEEecCCchHHHHHHHHHH---HH-------------------HHHHh
Confidence 999999999877655321 47777665432 1222222222 22 12245
Q ss_pred cCCceEEEEEechhhHHHHHhhccC
Q 009206 446 RNKRLTFAWLDGEAQDRYCSFYLFS 470 (540)
Q Consensus 446 ~~~~~~f~wvd~~~q~~f~~~~~~~ 470 (540)
++ .+.|+|+|++.+..++..|..+
T Consensus 267 ~~-~i~f~~id~~~~~~~~~~~gl~ 290 (382)
T 2r2j_A 267 KG-TINFLHADCDKFRHPLLHIQKT 290 (382)
T ss_dssp TT-TSEEEEEETTTTHHHHHHTTCC
T ss_pred CC-eeEEEEEchHHhHHHHHHcCCC
Confidence 44 6999999999999999988554
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.97 E-value=4.1e-31 Score=286.99 Aligned_cols=283 Identities=13% Similarity=0.144 Sum_probs=218.5
Q ss_pred ceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.|..||.++|++.+.++++|||+||||||+||+++.|.|+++|+.+++. +.+++|||++++. +|++++ |
T Consensus 14 ~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~---l~~~~~------v 84 (504)
T 2b5e_A 14 SAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQD---LCMEHN------I 84 (504)
T ss_dssp SSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHH---HHHHTT------C
T ss_pred CCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHH---HHHhcC------C
Confidence 46899999999999998999999999999999999999999999999986 7999999997765 999999 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEeCCCCCCcH
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASP 294 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~~~~~~~ 294 (540)
++|||+++|++|.. .....|.|.++.+.|++|+.+.+ .|.+..+++ ++.|+.......++|++|.+.......
T Consensus 85 ~~~Pt~~~~~~g~~--~~~~~~~G~~~~~~l~~~l~~~~--~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~ 157 (504)
T 2b5e_A 85 PGFPSLKIFKNSDV--NNSIDYEGPRTAEAIVQFMIKQS--QPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNA 157 (504)
T ss_dssp CSSSEEEEEETTCT--TCEEECCSCCSHHHHHHHHHHHT--SCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHH
T ss_pred CcCCEEEEEeCCcc--ccceeecCCCCHHHHHHHHHHhc--CCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHH
Confidence 99999999999862 11478999999999999999983 344444544 678887543224667777754334456
Q ss_pred HHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-C---ChhHHHHHHHhhccCCCcc
Q 009206 295 FVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-F---NNSRLSEVMEQNKLQELPQ 370 (540)
Q Consensus 295 ~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~-~---~~~~l~~fi~~~~~~~lp~ 370 (540)
.++.+|..+++.+.|+.+. +++++++++ +++|++.+ .++.|.|. + +.+.|.+||..+.+|++++
T Consensus 158 ~f~~~A~~~~~~~~F~~~~-------~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~ 225 (504)
T 2b5e_A 158 TFYSMANKHFNDYDFVSAE-------NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGE 225 (504)
T ss_dssp HHHHHHHHTTTTCEEEEEE-------CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCB
T ss_pred HHHHHHHHhhcCcEEEEEH-------HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCccc
Confidence 7788999999999998875 255677774 88888755 77889998 6 8899999999999999999
Q ss_pred ccccchhhhccCCCCCCCCCCCCceeEEEEEecCCChhhHHHHHHHHHHHHhhccccccccccccCCchHHHHhccCCce
Q 009206 371 LRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRL 450 (540)
Q Consensus 371 l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 450 (540)
++..+..+ .|..+ . .++++ +.......+++++.++++++ .+++ .+
T Consensus 226 ~t~~~~~~-~~~~~------~----~~~~l-~~~~~~~~~~~~~~l~~~a~----------------------~~~~-~i 270 (504)
T 2b5e_A 226 IDGSVFAQ-YVESG------L----PLGYL-FYNDEEELEEYKPLFTELAK----------------------KNRG-LM 270 (504)
T ss_dssp CCHHHHHH-HHHTT------S----CEEEE-EESSHHHHHHHHHHHHHHHH----------------------HTTT-TC
T ss_pred CCHhHHHH-HhcCC------C----cEEEE-EecCcccHHHHHHHHHHHHH----------------------hcCC-ee
Confidence 99988654 33211 1 23333 33333334556666666665 6655 49
Q ss_pred EEEEEechhhHHHHHhhccCCccccccCCccCCCCCCeEEEEEe
Q 009206 451 TFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVRY 494 (540)
Q Consensus 451 ~f~wvd~~~q~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 494 (540)
.|+|+|++.+.++++.|.. . .+.|.++++..
T Consensus 271 ~F~~id~~~~~~~~~~~gl-~------------~~~P~v~i~~~ 301 (504)
T 2b5e_A 271 NFVSIDARKFGRHAGNLNM-K------------EQFPLFAIHDM 301 (504)
T ss_dssp EEEEEEHHHHTTHHHHTTC-C------------SCSSEEEEEET
T ss_pred EEEEEehhhhHHHHHHcCC-c------------ccCCEEEEEeC
Confidence 9999999999999998854 2 24577777754
No 8
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.9e-28 Score=244.34 Aligned_cols=230 Identities=17% Similarity=0.245 Sum_probs=182.3
Q ss_pred cceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 135 ~~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
...|++||.++|++.+ ++++++||.||||||++|+++.|.|+++|+.+.+...++.|||+.... ..+|++++
T Consensus 16 ~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~-~~l~~~~~------ 88 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKN-KALCAKYD------ 88 (298)
T ss_dssp CTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTT-HHHHHHTT------
T ss_pred CCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccC-HHHHHhCC------
Confidence 3468999999999999 678899999999999999999999999999999888999999984321 24999999
Q ss_pred eeeeeEEEEeCCCCCC-------------CCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCce
Q 009206 214 RRGLPSLVAFPPGCKS-------------SDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKV 280 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~-------------~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~ 280 (540)
|.++||+++|.+|..- ......|.|.++.++|++|+.+.+ .+.+..+++.+.++.|+... +.+
T Consensus 89 I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~--~~~v~~i~~~~~l~~~l~~~--~~~ 164 (298)
T 3ed3_A 89 VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI--RSYVKKFVRIDTLGSLLRKS--PKL 164 (298)
T ss_dssp CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC--CCCEEECSCGGGHHHHHTSC--SSE
T ss_pred CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc--ccccEEcCCHHHHHHHHhcC--Cce
Confidence 9999999999988510 012478999999999999999883 23344454444478888753 468
Q ss_pred EEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHH--HHcC-----C-------------CCCCEEEEEeCC
Q 009206 281 KVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWW--NTFE-----V-------------ESAPAIVFLKDP 340 (540)
Q Consensus 281 ~vv~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~--~~f~-----V-------------~~~Ptlv~fk~~ 340 (540)
.|++|+.+. ...+.++.+|..|++.+.|+.+...+.. .+. ++|+ | ...|+|++|+..
T Consensus 165 ~vi~fs~~~-~~~~~f~~~A~~~~~~~~F~~v~~~~~a--~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~ 241 (298)
T 3ed3_A 165 SVVLFSKQD-KISPVYKSIALDWLGKFDFYSISNKKLK--QLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDAD 241 (298)
T ss_dssp EEEEEESSS-SCCHHHHHHHHHTBTTEEEEEEEGGGCC--CCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETT
T ss_pred EEEEEcCCC-cchHHHHHHHHHhhcCcEEEEEcchHhh--hhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCC
Confidence 888887553 4678999999999999999998743221 111 2232 2 568999999998
Q ss_pred CCceeeecC-CCChhHHHHHHH--hhccCCCccccccchhh
Q 009206 341 GVKPVVYYG-SFNNSRLSEVME--QNKLQELPQLRSVTSME 378 (540)
Q Consensus 341 ~~~~~~y~G-~~~~~~l~~fi~--~~~~~~lp~l~~~~~~~ 378 (540)
+..++.|.| .++.++|.+||. .+..|.+++|+..+.+.
T Consensus 242 ~~~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 242 KDKFWEYEGNSINKNDISKFLRDTFSITPNEGPFSRRSEYI 282 (298)
T ss_dssp TTEEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHHHHHH
T ss_pred CCceEEeccccCCHHHHHHHHHhhcCCCCCcCCCchHHHHH
Confidence 889999995 689999999999 78899999999877443
No 9
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.93 E-value=2e-24 Score=246.29 Aligned_cols=287 Identities=15% Similarity=0.161 Sum_probs=218.3
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.|.++|.++|++. .+++++|.|||+||++|+++.|.|+++|+.+++.+.|+.|||++++. +|++++ |++
T Consensus 441 ~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~---~~~~~~------v~~ 509 (780)
T 3apo_A 441 HVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEG---LCNMYN------IQA 509 (780)
T ss_dssp CEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred CCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHH---HHHHcC------CCc
Confidence 4889999999887 78999999999999999999999999999998888999999997665 899999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCc-eEEEEEeCC---CCCC
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHK-VKVIFFSKT---GERA 292 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~-~~vv~f~~~---~~~~ 292 (540)
+||+++|.+|.. ..|.|.++.++|.+|+.+.+. |.+..++..+ +++++.....+. +.|.|+.+- ++..
T Consensus 510 ~Pt~~~~~~g~~-----~~~~g~~~~~~l~~fi~~~~~--~~v~~l~~~~-f~~~v~~~~~~~~~lv~F~ap~C~~c~~~ 581 (780)
T 3apo_A 510 YPTTVVFNQSSI-----HEYEGHHSAEQILEFIEDLRN--PSVVSLTPST-FNELVKQRKHDEVWMVDFYSPWSHPSQVL 581 (780)
T ss_dssp SSEEEEEETTEE-----EEECSCSCHHHHHHHHHHHHS--CSEEECCHHH-HHHHTTTCCTTCCEEEEEECTTCHHHHHH
T ss_pred CCeEEEEcCCce-----eeecCcccHHHHHHHHHhhcc--cceeecCccc-HHHHhhccCCCCeEEEEEECCCCHHHHHh
Confidence 999999987642 678999999999999999843 5555566544 567665433233 444455432 3345
Q ss_pred cHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCC---ceeeecC-CCChhHHHHHHHhhccCCC
Q 009206 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYG-SFNNSRLSEVMEQNKLQEL 368 (540)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~---~~~~y~G-~~~~~~l~~fi~~~~~~~l 368 (540)
.|.+..+|..+++.+.|+.+... ....++++|+|+++|+|++|+.++. .+..|.| .++.+.|.+||..+..+.+
T Consensus 582 ~p~~~~lA~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~v 659 (780)
T 3apo_A 582 MPEWKRMARTLTGLINVGSVDCG--QYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQAS 659 (780)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETT--TTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCCS
T ss_pred hHHHHHHHHHhhCCeEEEEEECc--chHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhccccc
Confidence 67888899999888888887632 2367899999999999999987654 4677999 8899999999999887778
Q ss_pred ccccccchhhhccCCCCCCCCCCCCceeEEEEEecCC-ChhhHHHHHHHHHHHHhhccccccccccccCCchHHHHhccC
Q 009206 369 PQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL-SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRN 447 (540)
Q Consensus 369 p~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 447 (540)
.+++..+..+..+.. ++ .++|.|..+ -.....+...+.++++ .+++
T Consensus 660 ~~l~~~~~~~~~~~~------~~-----~v~v~F~a~wC~~C~~~~p~~~~la~----------------------~~~~ 706 (780)
T 3apo_A 660 IDLTPQTFNEKVLQG------KT-----HWVVDFYAPWSGPSQNFAPEFELLAR----------------------MIKG 706 (780)
T ss_dssp EEECHHHHHHHTTTC------SS-----CEEEEEECTTCHHHHHHHHHHHHHHH----------------------HHTT
T ss_pred ccCCHHHHHHHHhcC------CC-----eEEEEEECCCCHHHHHHHHHHHHHHH----------------------HhcC
Confidence 888877765544422 12 334445332 2334455566666665 5544
Q ss_pred CceEEEEEechhhHHHHHhhccCCccccccCCccCCCCCCeEEEE
Q 009206 448 KRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIV 492 (540)
Q Consensus 448 ~~~~f~wvd~~~q~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 492 (540)
.+.|++||++...+++..|- ...+|.++++
T Consensus 707 -~~~~~~vd~~~~~~~~~~~~--------------v~~~Pt~~~~ 736 (780)
T 3apo_A 707 -KVRAGKVDCQAYPQTCQKAG--------------IKAYPSVKLY 736 (780)
T ss_dssp -TCEEEEEETTTCHHHHHHTT--------------CCSSSEEEEE
T ss_pred -CceEEEEECCCCHHHHHhcC--------------CCcCCEEEEE
Confidence 49999999999888888773 3345777766
No 10
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.92 E-value=9.8e-25 Score=212.82 Aligned_cols=209 Identities=16% Similarity=0.256 Sum_probs=165.6
Q ss_pred ceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc---cceeeeeccchhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~---~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
+.|..||.++|+..+.++++++|.|||+||++|+++.|.|+++++.+++. +.++.|||++++. +|++++
T Consensus 15 ~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~----- 86 (241)
T 3idv_A 15 NGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASV---LASRFD----- 86 (241)
T ss_dssp TTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTT-----
T ss_pred CCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHH---HHHhcC-----
Confidence 35899999999999988999999999999999999999999999999876 6899999997665 999999
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcC----Ccccc-cccchhhhhhhhhcCCCceEEEEEe-
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL----PRIFY-YTKESMGKNFLAKTGPHKVKVIFFS- 286 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~l----p~~~~-i~~~~~~~~fl~~~~~~~~~vv~f~- 286 (540)
|+++||+++|.+|.. ..|.|.++.+.|.+|+.+..... +.... ++..+ +++++... ++.+|.|.
T Consensus 87 -v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~v~f~a 156 (241)
T 3idv_A 87 -VSGYPTIKILKKGQA-----VDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN-FDEVVNDA---DIILVEFYA 156 (241)
T ss_dssp -CCSSSEEEEEETTEE-----EECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT-HHHHHHHC---SEEEEEEEC
T ss_pred -CCcCCEEEEEcCCCc-----ccccCcccHHHHHHHHhhccCcccccccccceeccHHH-HHHhhccC---CeEEEEEEC
Confidence 999999999998864 57999999999999999874321 11111 34434 56666543 35566553
Q ss_pred C---CCCCCcHHHHHHHHhhccC---ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHH
Q 009206 287 K---TGERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (540)
Q Consensus 287 ~---~~~~~~~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi 360 (540)
+ .|....|.+..+|..+.+. +.|+.+.... ...++++|+|.++||+++|+++ +++.|.|..+.+.|.+||
T Consensus 157 ~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l 232 (241)
T 3idv_A 157 PWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA--ETDLAKRFDVSGYPTLKIFRKG--RPYDYNGPREKYGIVDYM 232 (241)
T ss_dssp TTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSSEEEEEETT--EEEECCSCCSHHHHHHHH
T ss_pred CCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC--CHHHHHHcCCcccCEEEEEECC--eEEEecCCCCHHHHHHHH
Confidence 2 3445668888888887654 6777776432 3689999999999999999864 355699999999999999
Q ss_pred HhhccC
Q 009206 361 EQNKLQ 366 (540)
Q Consensus 361 ~~~~~~ 366 (540)
.++..+
T Consensus 233 ~~~~~~ 238 (241)
T 3idv_A 233 IEQSGA 238 (241)
T ss_dssp HHHTTC
T ss_pred HhhhCC
Confidence 986543
No 11
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.89 E-value=7.9e-22 Score=193.65 Aligned_cols=209 Identities=12% Similarity=0.180 Sum_probs=150.4
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhc---ccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
.|..||.++|+..+ +++++|+|+|||+||++|+++.|.|+++++.+.+ .+.+++|||+.+. ...+|++++
T Consensus 13 ~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~-~~~l~~~~~----- 86 (244)
T 3q6o_A 13 PLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEET-NSAVCRDFN----- 86 (244)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTT-THHHHHHTT-----
T ss_pred CceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchh-hHHHHHHcC-----
Confidence 58999999999987 6779999999999999999999999999999987 5699999995321 224999999
Q ss_pred eeeeeeEEEEeCCCCCCC-CCcccccCCCCHHHHHHHHHHhhhcCC----c----ccccccchhhhhhhhhcCCCceEEE
Q 009206 213 FRRGLPSLVAFPPGCKSS-DCMTRFEGELSVDAVTDWFATAILKLP----R----IFYYTKESMGKNFLAKTGPHKVKVI 283 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~-~~~~~y~G~~~~~~i~~fi~~~v~~lp----~----~~~i~~~~~~~~fl~~~~~~~~~vv 283 (540)
|.++||+++|.+|.... .....+.| ++.+.|.+|+.+.+.... . ...++..+ ++.|+... .....++
T Consensus 87 -v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~-l~~~~~~~-~~~~~al 162 (244)
T 3q6o_A 87 -IPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEE-IDGFFARN-NEEYLAL 162 (244)
T ss_dssp -CCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHH-HHTHHHHC-CCSEEEE
T ss_pred -CCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHH-HHHHhhcC-CCceEEE
Confidence 99999999999865410 11225556 799999999988754322 1 12233333 67777653 3567778
Q ss_pred EEeCCCCCCcHHHHHHHHhhccC--ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeec-CCCChhHHHHHH
Q 009206 284 FFSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYY-GSFNNSRLSEVM 360 (540)
Q Consensus 284 ~f~~~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~-G~~~~~~l~~fi 360 (540)
+|.+.. ....+.++..+... +.+..+. + ....++++|||+++|++++|..++. ...++ +.-+.+.+..++
T Consensus 163 ~f~~~~---~~~~~~~~~d~~~~~~i~v~~~~--~-~~~~l~~~f~v~~~Pslvl~~~~g~-~~~~~~~~~~r~~~~~~l 235 (244)
T 3q6o_A 163 IFEXGG---SYLAREVALDLSQHKGVAVRRVL--N-TEANVVRKFGVTDFPSCYLLFRNGS-VSRVPVLMESRSFYTAYL 235 (244)
T ss_dssp EEECTT---CCHHHHHHHHTTTCTTEEEEEEE--T-TCHHHHHHHTCCCSSEEEEEETTSC-EEECCCSSSSHHHHHHHH
T ss_pred EEEECC---cchHHHHHHHhccCCceEEEEEe--C-chHHHHHHcCCCCCCeEEEEeCCCC-eEeeccccccHHHHHHHH
Confidence 887543 45667766666533 4444433 2 2368999999999999999987654 33444 333566677776
Q ss_pred Hh
Q 009206 361 EQ 362 (540)
Q Consensus 361 ~~ 362 (540)
+.
T Consensus 236 ~~ 237 (244)
T 3q6o_A 236 QR 237 (244)
T ss_dssp HT
T ss_pred Hh
Confidence 65
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.84 E-value=5.8e-20 Score=199.17 Aligned_cols=210 Identities=14% Similarity=0.177 Sum_probs=151.9
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhc---ccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
.|.+||.++|+..+ +++++|+|.|||+||++|+++.|.|+++++.+++ .+.|++|||+++. ...+|++++
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~-~~~l~~~~~----- 86 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEET-NSAVCREFN----- 86 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGG-GHHHHHHTT-----
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccc-cHHHHHHcC-----
Confidence 58999999999887 6789999999999999999999999999999988 5699999997421 234999999
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCC--------cccccccchhhhhhhhhcCCCceEEEE
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP--------RIFYYTKESMGKNFLAKTGPHKVKVIF 284 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp--------~~~~i~~~~~~~~fl~~~~~~~~~vv~ 284 (540)
|.++||+++|.+|.........+.|.++.+.|.+|+.+.+.... ....++..+ ++.|+... ....++++
T Consensus 87 -V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~-l~~~l~~~-~~~~vall 163 (519)
T 3t58_A 87 -IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLND-IDGFFTRN-KADYLALV 163 (519)
T ss_dssp -CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHH-HTTGGGSC-CCSEEEEE
T ss_pred -CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHH-HHHHhccC-CCCeEEEE
Confidence 99999999999754321223556788999999999988754221 112233333 57777654 35677888
Q ss_pred EeCCCCCCcHHHHHHHHhhccC--ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCC-ChhHHHHHHH
Q 009206 285 FSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVME 361 (540)
Q Consensus 285 f~~~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~-~~~~l~~fi~ 361 (540)
|.+.. .+..+.++..+... +.++.+. .....++++|||+++|++++|..++... .+.... ..+.+..++.
T Consensus 164 F~~~~---s~~~~~~~ldl~~~~~v~v~~v~---~~~~~l~~kfgV~~~Pslvl~~~nGk~~-~~~v~~~~r~~~~~~l~ 236 (519)
T 3t58_A 164 FERED---SYLGREVTLDLSQYHAVAVRRVL---NTESDLVNKFGVTDFPSCYLLLRNGSVS-RVPVLVESRSFYTSYLR 236 (519)
T ss_dssp EECTT---CCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCCSSEEEEEETTSCEE-ECCCSSCSHHHHHHHHT
T ss_pred ecCCc---hHHHHHHHHHhhccCCeeEEEec---CchHHHHHHcCCCCCCeEEEEeCCCcee-ecccccccHHHHHHHHH
Confidence 87543 45667777776544 4444443 2346899999999999999999766432 222222 3455666665
Q ss_pred h
Q 009206 362 Q 362 (540)
Q Consensus 362 ~ 362 (540)
.
T Consensus 237 ~ 237 (519)
T 3t58_A 237 G 237 (519)
T ss_dssp T
T ss_pred H
Confidence 4
No 13
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.80 E-value=2.5e-19 Score=173.69 Aligned_cols=195 Identities=10% Similarity=0.042 Sum_probs=139.5
Q ss_pred ccccc--cCCCcEEEEEE-----ecCCCCccCChHHHHHHHHHH--hcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 146 FPSIF--HDSKPWLIQVY-----SDGSYLCGQFSGAWKTIAALL--EGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 146 F~~~v--~~~~~~lV~FY-----apwC~~C~~l~p~~~~~A~~l--~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
+...+ +...+++|.|| +|||+||+++.|+|+++|+.+ .+.+.+++|||++++. +|++++ |++
T Consensus 11 l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~~ 81 (229)
T 2ywm_A 11 LKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKE---ETEKYG------VDR 81 (229)
T ss_dssp HHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHH---HHHHTT------CCB
T ss_pred HHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHH---HHHHcC------CCc
Confidence 33444 34567777777 899999999999999999988 5667999999997665 999999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEE-EEeCCC---CCC
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERA 292 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv-~f~~~~---~~~ 292 (540)
+|||++|++|.. ...|.|.++.+.+.+|+.+.+........++... ++..+.. ...+.++ |+.+.| ...
T Consensus 82 ~Ptl~~~~~~~~----~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~ 154 (229)
T 2ywm_A 82 VPTIVIEGDKDY----GIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKT-LELLQVV--DIPIEIWVFVTTSCGYCPSA 154 (229)
T ss_dssp SSEEEEESSSCC----CEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHH-HHHHTTC--CSCEEEEEEECTTCTTHHHH
T ss_pred CcEEEEECCCcc----cceecCCccHHHHHHHHHHHHhccCCccCCCHHH-HHHHHhc--CCCeEEEEEECCCCcchHHH
Confidence 999999986543 5789999999999999987643111122233322 3444422 2234354 444332 224
Q ss_pred cHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
.+.+..++..+ +.+.++.+... ..+.++++|+|.+.|++++ + +. ...|.|..+.+.|.+||++.
T Consensus 155 ~~~~~~~~~~~-~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~--~-G~-~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 155 AVMAWDFALAN-DYITSKVIDAS--ENQDLAEQFQVVGVPKIVI--N-KG-VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHHHHHHHHHC-TTEEEEEEEGG--GCHHHHHHTTCCSSSEEEE--G-GG-TEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEEEECC--CCHHHHHHcCCcccCEEEE--C-CE-EEEeeCCCCHHHHHHHHHHH
Confidence 56777777776 45666666533 2367999999999999988 3 33 34489999999999999764
No 14
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.80 E-value=8.6e-20 Score=160.47 Aligned_cols=106 Identities=15% Similarity=0.127 Sum_probs=93.0
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHh-----cccceeeeeccchhhhhHHHHhCCCC
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHLAERKPIG 209 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-----~~~~v~~Vdc~~~~~~~~l~~~~~~~ 209 (540)
+.|..||.++|++.+ ++++++||.||||||++|+++.|.|+++|+.+. +.+.+++|||++++. +|++++
T Consensus 15 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~-- 89 (127)
T 3h79_A 15 SRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPD---VIERMR-- 89 (127)
T ss_dssp CCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHH---HHHHTT--
T ss_pred CceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHh---HHHhcC--
Confidence 468999999999998 579999999999999999999999999999874 345899999997665 999999
Q ss_pred ccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 210 ~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|.+|.. ..+..|.|.++.+.|.+|+.+.
T Consensus 90 ----v~~~Pt~~~~~~g~~--~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 ----VSGFPTMRYYTRIDK--QEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp ----CCSSSEEEEECSSCS--SSCEECCSCCCHHHHHHHHHHH
T ss_pred ----CccCCEEEEEeCCCC--CCceEecCCccHHHHHHHHHhc
Confidence 999999999998864 1236799999999999999764
No 15
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.79 E-value=3.3e-19 Score=184.85 Aligned_cols=208 Identities=15% Similarity=0.167 Sum_probs=155.1
Q ss_pred eeEEeCCCCcccccc-CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc--chhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--DIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~--~~~~~~~l~~~~~~~~~~~ 213 (540)
.|.++|.++|...+. ...+|+|.||++||++|+++.|.|+++|+.+++.+.++.|||+ +++. +|+.+|
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~---~~~~fg------ 188 (361)
T 3uem_A 118 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQR---ILEFFG------ 188 (361)
T ss_dssp SEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHH---HHHHTT------
T ss_pred cceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHH---HHHHcC------
Confidence 488999999998885 4568899999999999999999999999999999999999999 4444 899999
Q ss_pred eee--eeEEEEeCCCCCCCCCccccc---CCCCHHHHHHHHHHhhhc----------CCc------ccccccchhhhhhh
Q 009206 214 RRG--LPSLVAFPPGCKSSDCMTRFE---GELSVDAVTDWFATAILK----------LPR------IFYYTKESMGKNFL 272 (540)
Q Consensus 214 V~~--~Ptl~~f~~g~~~~~~~~~y~---G~~~~~~i~~fi~~~v~~----------lp~------~~~i~~~~~~~~fl 272 (540)
|++ +|++++|..|.. ...|. |.++.+.|.+|+.+.+.+ +|. +..++..+ ++.++
T Consensus 189 i~~~~~P~~~~~~~~~~----~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~-f~~~~ 263 (361)
T 3uem_A 189 LKKEECPAVRLITLEEE----MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN-FEDVA 263 (361)
T ss_dssp CCTTTCSEEEEEECC------CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT-HHHHH
T ss_pred CCccCCccEEEEEcCCc----ccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc-hhhhc
Confidence 877 999999998643 35665 899999999999886432 111 11133333 34444
Q ss_pred hhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhccC--ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCC-CCcee
Q 009206 273 AKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPV 345 (540)
Q Consensus 273 ~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~~--~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~-~~~~~ 345 (540)
.. .+++.+|.| .+ .|....|.+..++..|.+. +.++.+..... .+.+|+|.++||+++|+.+ +..+.
T Consensus 264 ~~--~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~----~~~~~~v~~~Pt~~~~~~~~~~~~~ 337 (361)
T 3uem_A 264 FD--EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTAN----EVEAVKVHSFPTLKFFPASADRTVI 337 (361)
T ss_dssp TC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTC----BCSSCCCCSSSEEEEECSSSSCCCE
T ss_pred cc--CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCcc----chhhcCCcccCeEEEEECCCCccee
Confidence 22 234555544 33 2344567888899888765 45555543222 2678999999999999765 45677
Q ss_pred eecCCCChhHHHHHHHhhc
Q 009206 346 VYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 346 ~y~G~~~~~~l~~fi~~~~ 364 (540)
.|.|.++.+.|.+||+++.
T Consensus 338 ~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 338 DYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp ECCSCSSHHHHHHHHTTTS
T ss_pred EecCCCCHHHHHHHHHhcC
Confidence 8999999999999999864
No 16
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.79 E-value=4.2e-19 Score=171.49 Aligned_cols=193 Identities=15% Similarity=0.138 Sum_probs=138.2
Q ss_pred CCCcEEEEEEec-CCCCccCChHHHHHHHHHHhcccceeeeeccc--hhhhhHHHHhCCCCccceeeeeeEEEEeCCCCC
Q 009206 152 DSKPWLIQVYSD-GSYLCGQFSGAWKTIAALLEGIANTGMVELGD--IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCK 228 (540)
Q Consensus 152 ~~~~~lV~FYap-wC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~--~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~ 228 (540)
++.+++|.||+| ||++|+++.|.|+++|+. .+.+.++.|||++ ++. +|++++ |+++||+++|++|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~---~~~~~~------v~~~Pt~~~~~~g~~ 90 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKE---LAKRYR------IDRAPATTITQDGKD 90 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHH---HHHHTT------CCSSSEEEEEETTBC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHH---HHHHcC------CCcCceEEEEcCCce
Confidence 456788999999 999999999999999864 5667999999996 544 999999 999999999988753
Q ss_pred CCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEE-EEeCC---CCCCcHHHHHHHHhhc
Q 009206 229 SSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQISRNYW 304 (540)
Q Consensus 229 ~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv-~f~~~---~~~~~~~~~~~A~~~~ 304 (540)
....|.|.++.+.+.+|+...+........++... .+..... ...+.++ |+.+. |....|.+..++..+.
T Consensus 91 ---~~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 91 ---FGVRYFGLPAGHEFAAFLEDIVDVSREETNLMDET-KQAIRNI--DQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp ---CSEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHH-HHHHTTC--CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred ---eeEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHH-HHHHHhc--CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 23678999999999999987532111111122222 3333321 1234244 44432 2334577777888775
Q ss_pred ----cCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 305 ----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 305 ----~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+.+.++.+... ....++++|+|.+.||+++|+++ .....+.|..+.+.|.+||+..
T Consensus 165 ~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 165 KAGKGKILGDMVEAI--EYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp HTTCCCEEEEEEEGG--GCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred cccCCcEEEEEEEcc--cCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 35666666533 23679999999999999999854 3445689999999999999764
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.78 E-value=2.3e-19 Score=142.74 Aligned_cols=67 Identities=33% Similarity=0.541 Sum_probs=63.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhhhhhhhccch
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 102 (540)
..|||++|||+++++.++||+|||+|+++||||+++++.++|++|++||++|+||.+|+.||++|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 5699999999999999999999999999999999988889999999999999999999999999964
No 18
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.76 E-value=6.4e-19 Score=141.65 Aligned_cols=70 Identities=26% Similarity=0.458 Sum_probs=65.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--CcHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
..|||++|||+++++.++||+|||+|++++|||+++ ++.+.|++|++||++|+||.+|+.||.+|.++..
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 469999999999999999999999999999999986 5678999999999999999999999999988754
No 19
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.75 E-value=9.3e-19 Score=145.56 Aligned_cols=70 Identities=30% Similarity=0.572 Sum_probs=66.7
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
..|||+||||+++++.++||+|||+|+++||||+++++.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 5699999999999999999999999999999999998899999999999999999999999999987754
No 20
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1e-18 Score=140.78 Aligned_cols=71 Identities=27% Similarity=0.481 Sum_probs=65.2
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--CcHHHHHHHHHHHHHcCChhhhhhhhhccchhh
Q 009206 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (540)
Q Consensus 34 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 104 (540)
....|||++|||+++++.++||+|||+|+++||||+++ ++.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 34679999999999999999999999999999999986 457889999999999999999999999997753
No 21
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.9e-18 Score=139.60 Aligned_cols=69 Identities=26% Similarity=0.517 Sum_probs=64.1
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccchh
Q 009206 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (540)
Q Consensus 35 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 103 (540)
...|||++|||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|..||.+|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 46799999999999999999999999999999999863 4678999999999999999999999999765
No 22
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=2.2e-18 Score=140.24 Aligned_cols=72 Identities=29% Similarity=0.469 Sum_probs=65.2
Q ss_pred CCCccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCc----HHHHHHHHHHHHHcCChhhhhhhhhccchhh
Q 009206 33 RSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS----TADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (540)
Q Consensus 33 ~~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~ 104 (540)
.+...|||+||||+++++.++||+|||+|+++||||++++. .++|++|++||++|+||.+|+.||.+|..+.
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 34467999999999999999999999999999999998753 4689999999999999999999999997653
No 23
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=3.2e-18 Score=141.17 Aligned_cols=69 Identities=29% Similarity=0.575 Sum_probs=64.5
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--CcHHHHHHHHHHHHHcCChhhhhhhhhccchh
Q 009206 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (540)
Q Consensus 35 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 103 (540)
...|||++|||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|..||.+|..+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999999986 46789999999999999999999999999765
No 24
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.72 E-value=2.1e-18 Score=147.15 Aligned_cols=99 Identities=15% Similarity=0.240 Sum_probs=84.3
Q ss_pred EEeC-CCCccccc--cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 139 NVVT-SEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 139 ~~lt-~~~F~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.+++ .++|++.+ .++++++|.||||||++|+.+.|.|+++++.+.+ ..+++||+++++. ||++++ |+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d~~~~---l~~~~~------V~ 72 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVDECED---IAQDNQ------IA 72 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETTTCHH---HHHHTT------CC
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecccCHH---HHHHcC------CC
Confidence 3454 46899888 3578999999999999999999999999998865 4799999997765 999999 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ..++.| .+.+.|.+|+.++
T Consensus 73 ~~PT~~~~~~G~~----v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 73 CMPTFLFMKNGQK----LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp BSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred eecEEEEEECCEE----EEEEeC-cCHHHHHHHHHhc
Confidence 9999999999864 466778 6899999999764
No 25
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=1.4e-17 Score=146.35 Aligned_cols=110 Identities=19% Similarity=0.348 Sum_probs=96.3
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.|..|+.++|+..+ +++++++|.||++||++|+++.|.|+++++.+++.+.++.|||++++. +|++++ |
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~------v 87 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQS---LGGQYG------V 87 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHH---HHHHHT------C
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHH---HHHHcC------C
Confidence 357899999999866 788999999999999999999999999999998878999999997665 889998 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCC
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp 257 (540)
+++||+++|.+|.. ....|.|.++.+.|.+|+.+.+...|
T Consensus 88 ~~~Pt~~~~~~~~~---~~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 88 QGFPTIKIFGANKN---KPEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp CSSSEEEEESSCTT---SCEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred CccCEEEEEeCCCC---eEEEeecCCCHHHHHHHHHHHHhcCC
Confidence 99999999998753 24678999999999999998754333
No 26
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=4.4e-18 Score=140.31 Aligned_cols=71 Identities=31% Similarity=0.478 Sum_probs=65.3
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC--cHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP--STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 35 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
...|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 77 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFT 77 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 35799999999999999999999999999999999873 467899999999999999999999999987654
No 27
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.70 E-value=6.9e-18 Score=143.74 Aligned_cols=104 Identities=15% Similarity=0.294 Sum_probs=94.5
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
..|..+|.++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|++++ |
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v 74 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKT---LFQRFS------L 74 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH---HHHHTT------C
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChh---HHHhcC------C
Confidence 357889999999999 788999999999999999999999999999998878999999997765 899999 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 75 ~~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 75 KGVPQILYFKDGEY----KGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp CSSCEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred CcCCEEEEEECCEE----EEEEeccCCHHHHHHHHHHH
Confidence 99999999988854 46789999999999999876
No 28
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=8.8e-18 Score=141.36 Aligned_cols=69 Identities=26% Similarity=0.496 Sum_probs=62.2
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC----cHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 37 ~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~----~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
.|||+||||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 489999999999999999999999999999999875 357899999999999999999999999977643
No 29
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=1.9e-17 Score=141.98 Aligned_cols=72 Identities=25% Similarity=0.415 Sum_probs=66.0
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 34 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
....|||+||||+++|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 14 TSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 336799999999999999999999999999999999875 367899999999999999999999999988754
No 30
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.70 E-value=2.3e-17 Score=153.40 Aligned_cols=108 Identities=15% Similarity=0.307 Sum_probs=92.1
Q ss_pred eeEEeCCCCcccccc--CCCcEEEEEEe-------cCCCCccCChHHHHHHHHHHh-----cccceeeeeccchhhhhHH
Q 009206 137 AFNVVTSEDFPSIFH--DSKPWLIQVYS-------DGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHL 202 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~--~~~~~lV~FYa-------pwC~~C~~l~p~~~~~A~~l~-----~~~~v~~Vdc~~~~~~~~l 202 (540)
.|+.||++||+++|. .+.+++|.|+| +|||+|+.++|+|+++|+++. +.+.|++||+++++. +
T Consensus 19 ~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~---l 95 (178)
T 3ga4_A 19 GVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQ---L 95 (178)
T ss_dssp SEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHH---H
T ss_pred CCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHH---H
Confidence 589999999999884 36689999999 499999999999999999998 777999999998776 9
Q ss_pred HHhCCCCccceeeeeeEEEEeCCCCCCC--------CCcccc---cC-CCCHHHHHHHHHHhh
Q 009206 203 AERKPIGQIFFRRGLPSLVAFPPGCKSS--------DCMTRF---EG-ELSVDAVTDWFATAI 253 (540)
Q Consensus 203 ~~~~~~~~~~~V~~~Ptl~~f~~g~~~~--------~~~~~y---~G-~~~~~~i~~fi~~~v 253 (540)
+++++ |+++|||++|++|.... .....| .| .++++.|.+|+.+++
T Consensus 96 a~~~~------I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t 152 (178)
T 3ga4_A 96 VKDLK------LQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKIL 152 (178)
T ss_dssp HHHTT------CCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHH
T ss_pred HHHcC------CCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhc
Confidence 99999 99999999999996421 012345 35 899999999999883
No 31
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=9.4e-18 Score=144.65 Aligned_cols=72 Identities=24% Similarity=0.280 Sum_probs=65.7
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 34 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
....|||++|||+++|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 346899999999999999999999999999999999864 478899999999999999999999999877643
No 32
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1e-17 Score=139.29 Aligned_cols=71 Identities=28% Similarity=0.468 Sum_probs=64.8
Q ss_pred CccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCc----HHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS----TADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 35 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
...|||+||||+++++.++||+|||+|+++||||+++.. .++|++|++||++|+||.+|+.||.+|..+..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 357999999999999999999999999999999998743 56899999999999999999999999987643
No 33
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=1.7e-17 Score=146.20 Aligned_cols=106 Identities=17% Similarity=0.323 Sum_probs=94.7
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHh----cccceeeeeccchhhhhHHHHhCCCCc
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQ 210 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~----~~~~v~~Vdc~~~~~~~~l~~~~~~~~ 210 (540)
+.|..|+.++|+..+ +++++++|.||++||++|+++.|.|+++++.+. +.+.++.|||++++. +|++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~--- 80 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQV---LASRYG--- 80 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCH---HHHHHT---
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHH---HHHhCC---
Confidence 458999999999887 678999999999999999999999999999997 667999999997665 889998
Q ss_pred cceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhh
Q 009206 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (540)
Q Consensus 211 ~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~ 254 (540)
|+++||+++|.+|.. ...|.|.++.+.|.+|+.+.+.
T Consensus 81 ---v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 81 ---IRGFPTIKIFQKGES----PVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp ---CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHHHH
T ss_pred ---CCeeCeEEEEeCCCc----eEEecCCCCHHHHHHHHHHHhh
Confidence 999999999998753 5778999999999999988743
No 34
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.69 E-value=2.9e-17 Score=140.91 Aligned_cols=101 Identities=9% Similarity=0.065 Sum_probs=92.1
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeee
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~ 217 (540)
|.+|+.++|++.+ ++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|++++ |.++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~~~ 72 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQE---TAGKYG------VMSI 72 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCS---HHHHTT------CCSB
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH---HHHHcC------CCcc
Confidence 5789999999999 88999999999999999999999999999998778999999997765 899998 9999
Q ss_pred eEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 218 Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 73 PTLLVLKDGEV----VETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 99999987753 46789999999999999877
No 35
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=3.9e-17 Score=145.44 Aligned_cols=103 Identities=17% Similarity=0.308 Sum_probs=93.7
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc---cceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~---~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.|..|+.++|+..+.+++++||.||++||++|+++.|.|+++++.+.+. +.++.|||+++.. +|++++
T Consensus 18 ~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------ 88 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASM---LASKFD------ 88 (140)
T ss_dssp TEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHH---HHHHTT------
T ss_pred CCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHH---HHHHCC------
Confidence 5889999999999988999999999999999999999999999999876 6899999997655 899998
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|++|. ...|.|.++.+.|.+|+.+.+
T Consensus 89 v~~~Pt~~~~~~G~-----~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 89 VSGYPTIKILKKGQ-----AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp CCSSSEEEEEETTE-----EEECCSCCCHHHHHHHHHHHH
T ss_pred CCccCeEEEEECCc-----EEEcCCCCCHHHHHHHHHHhc
Confidence 99999999998874 367899999999999999874
No 36
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.68 E-value=1.2e-17 Score=142.08 Aligned_cols=104 Identities=16% Similarity=0.271 Sum_probs=91.6
Q ss_pred cceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhc---ccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 135 ~~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
.+.|..+|.++|++.+. +++++|.||++||++|+++.|.|+++++.+.. .+.++.|||++++. +|++++
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~---- 75 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERN---ICSKYS---- 75 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHH---HHHHTT----
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHh---HHHhcC----
Confidence 34679999999999998 78999999999999999999999999998753 35899999997665 899999
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...|.|.++.+.|.+|+.++
T Consensus 76 --v~~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 76 --VRGYPTLLLFRGGKK----VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp --CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHH
T ss_pred --CCcccEEEEEeCCcE----EEeccCCcCHHHHHHHHHhc
Confidence 999999999988864 56889999999999999875
No 37
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.68 E-value=1.5e-17 Score=141.34 Aligned_cols=70 Identities=27% Similarity=0.495 Sum_probs=64.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccchhhh
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQL 105 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~ 105 (540)
..|||+||||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|..+..
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 3699999999999999999999999999999999863 467899999999999999999999999987643
No 38
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.68 E-value=2.6e-17 Score=138.79 Aligned_cols=102 Identities=20% Similarity=0.270 Sum_probs=92.6
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.|.+++.++|++.+ ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++. ++++++ |++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 73 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPS---TAAKYE------VMS 73 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHH---HHHhCC------Ccc
Confidence 46889999999999 89999999999999999999999999999998878999999997765 899998 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|.+|+. ...+.|.++.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 74 IPTLIVFKDGQP----VDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp BSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cCEEEEEeCCeE----EEEEeCCCCHHHHHHHHHHh
Confidence 999999998854 46789999999999998764
No 39
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.68 E-value=2.1e-17 Score=139.93 Aligned_cols=103 Identities=17% Similarity=0.314 Sum_probs=94.1
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.|..+|.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+...++.||+++++. ++++++ |.+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------i~~ 75 (109)
T 3tco_A 5 VTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQK---IADKYS------VLN 75 (109)
T ss_dssp CCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHH---HHHHTT------CCS
T ss_pred eEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHH---HHHhcC------ccc
Confidence 57889999999999889999999999999999999999999999998888999999997665 899999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|.+|.. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 76 IPTTLIFVNGQL----VDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcE----EEeeeccCCHHHHHHHHHHH
Confidence 999999988854 56789999999999999876
No 40
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.68 E-value=4.1e-17 Score=138.33 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=92.1
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..++.++|+..+ +++++++|.||++||++|+.+.|.++++++.+.+...++.|||++++. ++++++ |.
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~ 73 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------IR 73 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTT---HHHHTT------CC
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHH---HHHHcC------Cc
Confidence 47899999999766 788999999999999999999999999999998778999999997765 889998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 74 GIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCEEEEEeCCEE----EEEEecCCCHHHHHHHHHHh
Confidence 9999999988754 45688999999999999875
No 41
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.67 E-value=9.4e-17 Score=139.09 Aligned_cols=103 Identities=19% Similarity=0.384 Sum_probs=89.6
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhc-----ccceeeeeccchhhhhHHHHhCCCC
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-----IANTGMVELGDIRLATHLAERKPIG 209 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-----~~~v~~Vdc~~~~~~~~l~~~~~~~ 209 (540)
..|..|+.++|+..+ .++++++|.|||+||++|+++.|.|+++++.+.+ .+.++.|||++++ +++ +
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~-- 78 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--E-- 78 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--C--
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--c--
Confidence 357899999999987 7889999999999999999999999999999987 5689999999765 444 5
Q ss_pred ccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 210 ~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|.+|.. .....|.|.++.+.|.+|+.+.
T Consensus 79 ----v~~~Pt~~~~~~~~~--~~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 ----IQGFPTIKLYPAGAK--GQPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp ----CSSSSEEEEECSSCT--TSCCCCCCCSCHHHHHHHHHHT
T ss_pred ----cCcCCeEEEEeCcCC--CCceEecCCCCHHHHHHHHHhc
Confidence 999999999998743 1146789999999999999886
No 42
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.67 E-value=6.9e-17 Score=145.67 Aligned_cols=106 Identities=17% Similarity=0.302 Sum_probs=96.3
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.+..++.++|+..+.++++++|.||++||++|+++.|.|+++++.+.+.+.++.||+++++. ++++++ |.+
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~---l~~~~~------v~~ 109 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPA---LSTRFR------IRS 109 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHH---HHHHCC------CCc
Confidence 57899999999999899999999999999999999999999999998888999999997765 899999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhc
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILK 255 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~ 255 (540)
+||+++|++|.. ...|.|.++.+.|.+|+.+.+..
T Consensus 110 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 110 IPTIMLYRNGKM----IDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp SSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHHHS
T ss_pred cCEEEEEECCeE----EEEEeCCCCHHHHHHHHHHHhcc
Confidence 999999998864 46789999999999999987543
No 43
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=6.1e-17 Score=136.42 Aligned_cols=66 Identities=24% Similarity=0.381 Sum_probs=61.3
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---cHHHHHHHHHHHHHcCChhhhhhhhhccc
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGI 101 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 101 (540)
..|||+||||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 6799999999999999999999999999999999864 46789999999999999999999998644
No 44
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.67 E-value=3.2e-17 Score=138.25 Aligned_cols=102 Identities=12% Similarity=0.186 Sum_probs=90.7
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeee
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~ 217 (540)
|.+++.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. ++++++ |.++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~---~~~~~~------v~~~ 72 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPE---TTSQFG------IMSI 72 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHH---HHHHTT------CCSS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHH---HHHHcC------Cccc
Confidence 5789999999777888999999999999999999999999999998778999999997765 889999 9999
Q ss_pred eEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 218 Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
||+++|++|.. ...+.|..+.+.|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRP----VKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeE----EEEEecCCCHHHHHHHHHHH
Confidence 99999987753 45688999999999987654
No 45
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.66 E-value=5.7e-17 Score=139.52 Aligned_cols=105 Identities=17% Similarity=0.290 Sum_probs=92.3
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhc---ccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~---~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.|..++.++|+..+.++++++|.||++||++|+++.|.|+++++.+++ .+.++.|||++++. +|++++
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------ 78 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESD---LAQQYG------ 78 (120)
T ss_dssp TEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCS---SHHHHT------
T ss_pred CcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHH---HHHHCC------
Confidence 578999999999888889999999999999999999999999999874 35899999997665 888988
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. .....|.|.++.+.|.+|+.+.
T Consensus 79 v~~~Pt~~~~~~g~~--~~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 79 VRGYPTIKFFRNGDT--ASPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp CCSSSEEEEEESSCS--SSCEECCCCSSHHHHHHHHHTT
T ss_pred CCcccEEEEEeCCCc--CCcccccCccCHHHHHHHHHhc
Confidence 999999999988863 1126789999999999999876
No 46
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.66 E-value=7.8e-17 Score=136.07 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=92.1
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..++.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+...++.|||++++. ++++++ |.
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~ 73 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPE---TPNAYQ------VR 73 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCH---HHHHTT------CC
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHH---HHHhcC------CC
Confidence 57899999999776 788999999999999999999999999999998778999999997765 889998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 74 SIPTLMLVRDGKV----IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHT
T ss_pred ccCEEEEEeCCEE----EEEecCCCCHHHHHHHHHhc
Confidence 9999999988754 45688999999999998764
No 47
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.66 E-value=1.9e-17 Score=147.52 Aligned_cols=103 Identities=9% Similarity=0.091 Sum_probs=94.2
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecC--CCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapw--C~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+..+|+++|++.|.++.++||.|||+| ||+|+.++|.++++|+++.+. ++|++||.++++. |+.+|+ |
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~---lA~~yg------V 89 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEA---IGDRFG------A 89 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHH---HHHHHT------C
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHH---HHHHcC------C
Confidence 367999999999988889999999999 999999999999999999998 9999999997776 999999 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+++|||++|++|+. .....|.++.+.|.+|+.+.+
T Consensus 90 ~sIPTlilFk~G~~----v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 90 FRFPATLVFTGGNY----RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEE----EEEEecCCCHHHHHHHHHHHh
Confidence 99999999999965 567789999999999998874
No 48
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.66 E-value=4.7e-17 Score=145.62 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=94.2
Q ss_pred ceeEEeCCCCccc-cccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPS-IFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~-~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
..|..|+.++|.+ ++.++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|++++ |
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~------v 76 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPW---TAEKYG------V 76 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHH---HHHHHT------C
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHh---HHHHCC------C
Confidence 3579999999994 45789999999999999999999999999999999888999999997765 899998 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.++||+++|.+|.. ...|.|.++.+.|.+|+.+.+
T Consensus 77 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 77 QGTPTFKFFCHGRP----VWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp CEESEEEEEETTEE----EEEEESSCCHHHHHHHHHHHH
T ss_pred CcCCEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHHh
Confidence 99999999988864 467899999999999998873
No 49
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.66 E-value=3.6e-17 Score=136.59 Aligned_cols=67 Identities=21% Similarity=0.440 Sum_probs=61.4
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC---------cHHHHHHHHHHHHHcCChhhhhhhhhccch
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---------STADFLKIQYAYELLTDPLWKRNYDVYGID 102 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~---------~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 102 (540)
..|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+...
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 5799999999999999999999999999999999863 356899999999999999999999987643
No 50
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.66 E-value=8.1e-17 Score=137.53 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=92.1
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..+|.++|.+.+ +++++++|.||++||++|+++.|.|+++++.+.+.+.+..||+++++. ++++++ |.
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~ 76 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPG---TAAKYG------VM 76 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CC
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHH---HHHhCC------CC
Confidence 47899999998766 678999999999999999999999999999998778999999997665 899998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ...+.|..+.+.|.+|+.+.
T Consensus 77 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 77 SIPTLNVYQGGEV----AKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHTHHH
T ss_pred cccEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999988854 45688999999999999876
No 51
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.66 E-value=5.2e-17 Score=144.10 Aligned_cols=104 Identities=13% Similarity=0.048 Sum_probs=93.0
Q ss_pred eeEEeCCCCccccccCC-CcEEEEEEecCC--CCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFHDS-KPWLIQVYSDGS--YLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~-~~~lV~FYapwC--~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
....+|+++|++.+.+. .++||.|||+|| |+|+.++|..+++|+++.+.++|++||.++++. |+.+|+
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~---la~~yg------ 86 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERG---LMARFG------ 86 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHH---HHHHHT------
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------
Confidence 34689999999998544 499999999999 999999999999999999989999999997776 999999
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|+++|||++|++|+. ..+..|.++.+.|.+|+.+.+
T Consensus 87 V~siPTlilFkdG~~----v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 87 VAVCPSLAVVQPERT----LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp CCSSSEEEEEECCEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred CccCCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999965 567789999999999998763
No 52
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.66 E-value=5.9e-17 Score=135.61 Aligned_cols=101 Identities=13% Similarity=0.176 Sum_probs=91.3
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeee
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~ 217 (540)
|.++|.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+ ..++.|||++++. ++++++ |.++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~---~~~~~~------v~~~ 70 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPD---IAARYG------VMSL 70 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCSS
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHH---HHHhCC------cccc
Confidence 56899999999998889999999999999999999999999999987 8999999997665 889998 9999
Q ss_pred eEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 218 Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 71 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEP----VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE----hhhccCCCCHHHHHHHHHHH
Confidence 99999988754 45788999999999999876
No 53
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=8.4e-17 Score=141.94 Aligned_cols=106 Identities=17% Similarity=0.289 Sum_probs=90.8
Q ss_pred ceeEEeCCCCcccccc-CCCcEEEEEEecCCCCccCChHHHHHHHHHHh--cccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~--~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
+.|..|+.++|+..+. ++++++|.||++||++|+++.|.|+++++.+. +.+.++.|||+++.. ++++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~----- 78 (133)
T 2dj3_A 7 GPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDI---TNDQYK----- 78 (133)
T ss_dssp CSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCC---CCSSCC-----
T ss_pred CceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHH---HHhhcC-----
Confidence 4689999999999984 58999999999999999999999999999998 446899999997765 677777
Q ss_pred eeeeeeEEEEeCCCCCCCCCccccc-CCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFE-GELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~-G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|.+|.. .....|. |.++.+.|.+|+.+.
T Consensus 79 -v~~~Pt~~~~~~g~~--~~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 79 -VEGFPTIYFAPSGDK--KNPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp -CSSSSEEEEECTTCT--TSCEECCSSCCSTTHHHHHHHHH
T ss_pred -CCcCCEEEEEeCCCc--ccceEecCCCcCHHHHHHHHHHh
Confidence 999999999998753 1223577 569999999999987
No 54
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.65 E-value=6.9e-17 Score=142.46 Aligned_cols=104 Identities=15% Similarity=0.209 Sum_probs=92.3
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.|..|+.++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. ++++++ |
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~------v 92 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------I 92 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCT---TSGGGT------C
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH---HHHHcC------C
Confidence 357899999999765 788999999999999999999999999999998778999999997765 788888 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 93 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 93 RGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CccCEEEEEeCCEE----EEEEcCCCCHHHHHHHHHHh
Confidence 99999999987753 45688999999999999875
No 55
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.65 E-value=2e-16 Score=158.47 Aligned_cols=103 Identities=17% Similarity=0.288 Sum_probs=93.9
Q ss_pred eeEEeCCCCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
.|..+|.++|++++. .+++++|.||+|||++|+.+.|.|+++++++.+.+.+++|||++++. +|++++ |
T Consensus 8 ~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v 78 (287)
T 3qou_A 8 NIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQM---IAAQFG------L 78 (287)
T ss_dssp TEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHH---HHHTTT------C
T ss_pred ccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHH---HHHHcC------C
Confidence 478999999999885 38999999999999999999999999999999888999999997765 899999 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+++||+++|++|.. ...|.|.++.+.+..|+...
T Consensus 79 ~~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 79 RAIPTVYLFQNGQP----VDGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCCCeEEEEECCEE----EEEeeCCCCHHHHHHHHHHH
Confidence 99999999988854 46789999999999999887
No 56
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.65 E-value=1.4e-16 Score=136.28 Aligned_cols=103 Identities=17% Similarity=0.186 Sum_probs=92.7
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..++.++|++.+ .++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|++++ |.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~---~~~~~~------v~ 78 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPT---TVKKYK------VE 78 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHH---HHHHTT------CC
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHH---HHHHcC------CC
Confidence 47899999999876 788999999999999999999999999999998778999999997665 899998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 79 ~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 79 GVPALRLVKGEQI----LDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ceeEEEEEcCCEE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999987754 45688999999999999876
No 57
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.65 E-value=4.5e-17 Score=141.46 Aligned_cols=108 Identities=14% Similarity=0.262 Sum_probs=92.4
Q ss_pred eeEEeCCCCccc-cccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTSEDFPS-IFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~~~F~~-~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..||.++|.+ +++++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|++++ |.
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~ 74 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQ---TCQKAG------IK 74 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHH---HHHHTT------CC
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHH---HHHHcC------CC
Confidence 578899999965 45788999999999999999999999999999998878999999997665 899998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCC----CCHHHHHHHHHHhhhcCC
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATAILKLP 257 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~----~~~~~i~~fi~~~v~~lp 257 (540)
++||+++|.+|.. ...+.|. ++.+.|.+|+.+.+...+
T Consensus 75 ~~Pt~~~~~~~~~----~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 116 (122)
T 3aps_A 75 AYPSVKLYQYERA----KKSIWEEQINSRDAKTIAALIYGKLETLQ 116 (122)
T ss_dssp SSSEEEEEEEEGG----GTEEEEEEECCSCHHHHHHHHHHHHHCC-
T ss_pred ccceEEEEeCCCc----cceeeccccCcCCHHHHHHHHHHHHHhhh
Confidence 9999999987753 3556665 899999999988754443
No 58
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.65 E-value=5.4e-17 Score=137.47 Aligned_cols=98 Identities=13% Similarity=0.145 Sum_probs=77.0
Q ss_pred eCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEE
Q 009206 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (540)
Q Consensus 141 lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl 220 (540)
.|.++|++.++++++++|.||||||++|+++.|.|+++++.+. ...++.||+++++. ++++++ |.++||+
T Consensus 6 ~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~---l~~~~~------v~~~Pt~ 75 (105)
T 4euy_A 6 KTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQE---IAGRYA------VFTGPTV 75 (105)
T ss_dssp ----CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------------CCCCEE
T ss_pred CCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHH---HHHhcC------CCCCCEE
Confidence 3568899999889999999999999999999999999999884 46999999997765 888988 9999999
Q ss_pred EEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 221 VAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 221 ~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++|.+|+. ...+.|.++.+.|.+++.+.
T Consensus 76 ~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 76 LLFYNGKE----ILRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEEETTEE----EEEEESSCCHHHHHHHHHTT
T ss_pred EEEeCCeE----EEEEeCCcCHHHHHHHHHHh
Confidence 99998854 56778999999999998764
No 59
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.65 E-value=4.7e-17 Score=139.65 Aligned_cols=68 Identities=26% Similarity=0.335 Sum_probs=63.1
Q ss_pred ccccccccCccCCC-CHHHHHHHHHHHHHhcCCCCCCC------cHHHHHHHHHHHHHcCChhhhhhhhhccchh
Q 009206 36 PPSHYDALGIKPYS-SVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (540)
Q Consensus 36 ~~~~y~iLgv~~~a-~~~~Ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~ 103 (540)
..|||++|||+++| +.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|..+
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 67999999999999 99999999999999999999875 4578999999999999999999999998654
No 60
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=1.3e-16 Score=139.49 Aligned_cols=101 Identities=19% Similarity=0.394 Sum_probs=89.6
Q ss_pred ceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhc-ccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.|..||.++|++.++.. ++|.||++||++|+++.|.|+++++.+.+ .+.++.|||++++. +|++++ |
T Consensus 7 ~~v~~l~~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------v 75 (126)
T 1x5e_A 7 GNVRVITDENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPG---LSGRFI------I 75 (126)
T ss_dssp CSEEECCTTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHH---HHHHTT------C
T ss_pred CccEEecHHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHH---HHHHcC------C
Confidence 468999999999877543 99999999999999999999999999986 56999999997665 899998 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~~~Pt~~~~~~G~-----~~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 76 NALPTIYHCKDGE-----FRRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp CSSSEEEEEETTE-----EEECCSCCCHHHHHHHHHTC
T ss_pred cccCEEEEEeCCe-----EEEeecCCCHHHHHHHHHHH
Confidence 9999999998774 36789999999999999876
No 61
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.64 E-value=7.3e-17 Score=136.38 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=92.5
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.|.+||.++|+.+++++++++|.||++||++|+.+.|.++++++.+.+...++.|||++++. ++++++ |.+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 72 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPK---TAMRYR------VMS 72 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHH---HHHHTT------CCS
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHh---HHHhCC------CCc
Confidence 46889999999778888999999999999999999999999999998778999999997765 899999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|++|.. ...|.|..+.+.|.+|+.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 73 IPTVILFKDGQP----VEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred CCEEEEEeCCcE----eeeEeCCCCHHHHHHHHHHH
Confidence 999999987753 45688999999999999876
No 62
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.64 E-value=1.8e-16 Score=140.92 Aligned_cols=105 Identities=17% Similarity=0.182 Sum_probs=92.6
Q ss_pred ceeEEeCCCCcccccc------------CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHH
Q 009206 136 HAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLA 203 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~------------~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~ 203 (540)
..|..||.++|.+.+. ++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. +|
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~---l~ 85 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQE---LA 85 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HH
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHH---HH
Confidence 4678999999998773 46899999999999999999999999999998778999999997665 89
Q ss_pred HhCCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhhh
Q 009206 204 ERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (540)
Q Consensus 204 ~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~ 254 (540)
++++ |.++||+++| ++|.. ..|.|.++.+.|.+|+.+...
T Consensus 86 ~~~~------v~~~Pt~~~~~~~G~~-----~~~~G~~~~~~l~~~l~~~~~ 126 (136)
T 2l5l_A 86 GAFG------IRSIPSILFIPMEGKP-----EMAQGAMPKASFKKAIDEFLL 126 (136)
T ss_dssp HHTT------CCSSCEEEEECSSSCC-----EEEESCCCHHHHHHHHHHHHT
T ss_pred HHcC------CCCCCEEEEECCCCcE-----EEEeCCCCHHHHHHHHHHHhh
Confidence 9998 9999999999 67753 478999999999999998743
No 63
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.64 E-value=1.8e-16 Score=141.39 Aligned_cols=104 Identities=15% Similarity=0.170 Sum_probs=91.2
Q ss_pred ceeEEeCCCCcccccc------------CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHH
Q 009206 136 HAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLA 203 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~------------~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~ 203 (540)
+.|..||.++|...+. .+++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|
T Consensus 22 ~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~ 98 (141)
T 3hxs_A 22 SGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPE---LA 98 (141)
T ss_dssp -CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HH
T ss_pred CCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHH---HH
Confidence 3578899999988874 47999999999999999999999999999998888999999997765 89
Q ss_pred HhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 204 ERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 204 ~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++++ |.++||+++|..+.. ...|.|.++.+.|.+|+.+.
T Consensus 99 ~~~~------v~~~Pt~~~~~~~g~----~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 99 RDFG------IQSIPTIWFVPMKGE----PQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HHTT------CCSSSEEEEECSSSC----CEEEESCCCHHHHHHHHHHT
T ss_pred HHcC------CCCcCEEEEEeCCCC----EEEEeCCCCHHHHHHHHHHH
Confidence 9999 999999999955433 35789999999999999876
No 64
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.64 E-value=1.7e-16 Score=133.47 Aligned_cols=102 Identities=13% Similarity=0.198 Sum_probs=90.8
Q ss_pred eEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
|..+|.++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+...+..||+++++. +|++++ |.+
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 72 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPG---IATQYN------IRS 72 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------CCS
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHH---HHHhCC------CCc
Confidence 5789999999877 678999999999999999999999999999998778999999997665 899998 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|++|.. ...+.|..+.+.+.+|+.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 73 IPTVLFFKNGER----KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp SSEEEEEETTEE----EEEEEECCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEecCCCHHHHHHHHHhh
Confidence 999999988854 45678999999999998764
No 65
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.64 E-value=1.1e-16 Score=146.04 Aligned_cols=103 Identities=17% Similarity=0.290 Sum_probs=93.6
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.+..++.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+.+.+++||+++++. ++++++ |++
T Consensus 48 ~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~---l~~~~~------i~~ 118 (155)
T 2ppt_A 48 KVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPA---VAGRHR------IQG 118 (155)
T ss_dssp SEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTH---HHHHTT------CCS
T ss_pred CCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHH---HHHHcC------CCc
Confidence 46889999999999888999999999999999999999999999998878999999997765 899999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 119 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 119 IPAFILFHKGRE----LARAAGARPASELVGFVRGK 150 (155)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCeE----EEEecCCCCHHHHHHHHHHH
Confidence 999999988854 45689999999999999886
No 66
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.64 E-value=1.3e-16 Score=134.98 Aligned_cols=103 Identities=15% Similarity=0.205 Sum_probs=91.5
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..+|.++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+...++.||+++++. ++++++ |.
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~ 72 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPN---VASEYG------IR 72 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHHT------CC
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHH---HHHHCC------CC
Confidence 36789999999876 678999999999999999999999999999998778999999997665 889998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ...+.|..+.+.|.+++.+.
T Consensus 73 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 73 SIPTIMVFKGGKK----CETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SSCEEEEESSSSE----EEEEESCCCHHHHHHHHHHH
T ss_pred cCCEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999988864 45688999999999999775
No 67
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.64 E-value=5.6e-17 Score=140.29 Aligned_cols=100 Identities=11% Similarity=0.144 Sum_probs=89.1
Q ss_pred eEEeCCCCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 138 FNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 138 V~~lt~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
....|.++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+ +.++.|||++++. ++++++ |.
T Consensus 14 ~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~---l~~~~~------v~ 83 (116)
T 3qfa_C 14 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD---VASECE------VK 83 (116)
T ss_dssp BCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHH---HHHHTT------CC
T ss_pred cCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHcC------Cc
Confidence 35678899999996 899999999999999999999999999999877 8999999997765 899999 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|++|.. ...+.|. +.+.|.+|+.+.
T Consensus 84 ~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 84 SMPTFQFFKKGQK----VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSSEEEEESSSSE----EEEEESC-CHHHHHHHHHHH
T ss_pred cccEEEEEeCCeE----EEEEcCC-CHHHHHHHHHHh
Confidence 9999999988864 5668898 999999999765
No 68
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.63 E-value=1.5e-16 Score=138.11 Aligned_cols=104 Identities=17% Similarity=0.265 Sum_probs=92.7
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.|..+|.++|++.+ +++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||++++. ++++++ |
T Consensus 13 ~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~---l~~~~~------v 83 (119)
T 1w4v_A 13 TTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTD---LAIEYE------V 83 (119)
T ss_dssp SEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHH---HHHHTT------C
T ss_pred eEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHH---HHHHcC------C
Confidence 468899999999876 778999999999999999999999999999998778999999997665 899999 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 84 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 84 SAVPTVLAMKNGDV----VDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CcccEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 99999999987753 45788999999999999875
No 69
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.63 E-value=9e-17 Score=139.08 Aligned_cols=104 Identities=17% Similarity=0.183 Sum_probs=92.4
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.|..++.++|...+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------i 82 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPE---TARNFQ------V 82 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHH---HHHHTT------C
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---HHHhcC------C
Confidence 457899999998766 778999999999999999999999999999998778999999997665 899999 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|.. ...+.|..+.+.|.+|+.+.
T Consensus 83 ~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 83 VSIPTLILFKDGQP----VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHTCSC
T ss_pred CcCCEEEEEECCEE----EEEecCCCCHHHHHHHHHHH
Confidence 99999999998854 46789999999999998765
No 70
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.62 E-value=2e-16 Score=138.56 Aligned_cols=103 Identities=17% Similarity=0.245 Sum_probs=85.5
Q ss_pred eeEEeCCCCccccc-cCCCcEEEEEEecCCC--------------CccCChHHHHHHHHHHhcccceeeeeccchhhhhH
Q 009206 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSY--------------LCGQFSGAWKTIAALLEGIANTGMVELGDIRLATH 201 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~--------------~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~ 201 (540)
.|.+|+.++|++.+ +++++++|.||++||+ +|+++.|.|+++++.+.+.+.+++||+++++.
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~--- 80 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG--- 80 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTT---
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---
Confidence 57889999998665 7899999999999999 99999999999999998778999999997765
Q ss_pred HHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 202 l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++++++ |+++||+++|++|.. ...+.|.++.++|.+|+.+.
T Consensus 81 l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 81 TAPKYG------IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TGGGGT------CCBSSEEEEEESSSE----EEEEESCCCHHHHHHHHTTT
T ss_pred HHHHcC------CCccCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 888888 999999999988854 45789999999999998654
No 71
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.62 E-value=6.4e-16 Score=151.58 Aligned_cols=105 Identities=12% Similarity=0.104 Sum_probs=89.7
Q ss_pred ceeEEeCCCCccccccCCCcEEEEEE--ecCCCCccCChHHHHHHHHHHhc---ccceeeeeccc--hhhhhHHHHhCCC
Q 009206 136 HAFNVVTSEDFPSIFHDSKPWLIQVY--SDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGD--IRLATHLAERKPI 208 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~~~~~~lV~FY--apwC~~C~~l~p~~~~~A~~l~~---~~~v~~Vdc~~--~~~~~~l~~~~~~ 208 (540)
+.|..||..||+++++++++|||.|| ||||+ ++|.|+++|+.+.+ .+.|++|||++ ......||++++
T Consensus 16 ~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~- 90 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK- 90 (248)
T ss_dssp TTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT-
T ss_pred CCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC-
Confidence 35789999999998888899999999 99999 99999999999965 56999999997 111234999999
Q ss_pred Cccceee--eeeEEEEeCCCCCCCCCcccc--cCCCCHHHHHHHHHHhh
Q 009206 209 GQIFFRR--GLPSLVAFPPGCKSSDCMTRF--EGELSVDAVTDWFATAI 253 (540)
Q Consensus 209 ~~~~~V~--~~Ptl~~f~~g~~~~~~~~~y--~G~~~~~~i~~fi~~~v 253 (540)
|+ +||||++|+ |.. ..+..| .|.++.++|++|+.+.+
T Consensus 91 -----V~~~~~PTl~~F~-G~~--~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 91 -----VDDKNFPSIFLFK-GNA--DEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp -----CCTTSCCEEEEES-SSS--SSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred -----CCcCCCCeEEEEe-CCc--CcceeecccCCCCHHHHHHHHHHhh
Confidence 99 999999999 862 125778 99999999999999873
No 72
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.62 E-value=3.6e-15 Score=146.28 Aligned_cols=192 Identities=11% Similarity=0.101 Sum_probs=135.2
Q ss_pred ccccc-cCCCcEEEEEEecC--CCCccCChHHHHHHHHHH---hcc--cceeeeeccchhhhhHHHHhCCCCccceeeee
Q 009206 146 FPSIF-HDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALL---EGI--ANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (540)
Q Consensus 146 F~~~v-~~~~~~lV~FYapw--C~~C~~l~p~~~~~A~~l---~~~--~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~ 217 (540)
|..++ +-..+++|.||++| |++|+.+.|.++++|+.. +|. +.|+.+|+++++. +|++|+ |+++
T Consensus 17 l~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~---~~~~~g------v~~~ 87 (243)
T 2hls_A 17 LRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSD---KFSEFK------VERV 87 (243)
T ss_dssp HHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHH---HHHHTT------CCSS
T ss_pred HHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHH---HHHhcC------CCcC
Confidence 44445 34679999999999 999999999999999873 343 7899999997765 899999 9999
Q ss_pred eEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhh-cCCcccccccchhhhhhhhhcCCCceEEE-EEeC---CCCCC
Q 009206 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL-KLPRIFYYTKESMGKNFLAKTGPHKVKVI-FFSK---TGERA 292 (540)
Q Consensus 218 Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~-~lp~~~~i~~~~~~~~fl~~~~~~~~~vv-~f~~---~~~~~ 292 (540)
||+++| +| . .+|.|.++.+.+..|+...+. ..+... ++ ++..+.+ ... ..++.++ |+.+ .|...
T Consensus 88 Pt~~i~-~g-~-----~~~~G~~~~~~l~~fv~~~l~~~~~~~~-l~-~~~~~~~-~~~-~~~~~vv~F~a~wC~~C~~~ 156 (243)
T 2hls_A 88 PTVAFL-GG-E-----VRWTGIPAGEEIRALVEVIMRLSEDESG-LE-DATKEAL-KSL-KGRVHIETIITPSCPYCPYA 156 (243)
T ss_dssp SEEEET-TT-T-----EEEESCCCTTHHHHHHHHHHHHHTTCCC-CC-HHHHHHH-HHC-CSCEEEEEEECSSCSSHHHH
T ss_pred CEEEEE-CC-c-----eeEcCCCcHHHHHHHHHHHHhccCCCCC-CC-HHHHHHH-HHc-CCCcEEEEEECCCCCCcHHH
Confidence 999999 55 3 789999888899999877532 122211 22 1212222 222 1235455 5443 33345
Q ss_pred cHHHHHHHHhhc----cCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhhc
Q 009206 293 SPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 293 ~~~~~~~A~~~~----~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
.|.+..++..+. ..+.++.+... ..+.++++|+|.++||+++ + +. ..|.|..+.++|.++|.+..
T Consensus 157 ~p~l~~la~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~V~~vPt~~i--~-G~--~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 157 VLLAHMFAYEAWKQGNPVILSEAVEAY--ENPDIADKYGVMSVPSIAI--N-GY--LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEETT--TCHHHHHHTTCCSSSEEEE--T-TE--EEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccccCCcEEEEEEECc--cCHHHHHHcCCeeeCeEEE--C-CE--EEEeCCCCHHHHHHHHHHHh
Confidence 677777887763 34556555432 2367999999999999988 3 32 34899999999999998754
No 73
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.61 E-value=8.6e-16 Score=138.19 Aligned_cols=102 Identities=11% Similarity=0.102 Sum_probs=77.6
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecC--CCCccCChHHHHHHHHHHhcccc--eeeeeccchhhhhHHHHhCCCCccce
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGIAN--TGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapw--C~~C~~l~p~~~~~A~~l~~~~~--v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
+..+|.++|++.+.+++.++|.||++| |++|+.++|.|+++++++ +.+. +++||+++++. ++++|+
T Consensus 19 ~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~---la~~~~------ 88 (142)
T 2es7_A 19 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEA---IGDRFN------ 88 (142)
T ss_dssp CEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHH---HHHTTT------
T ss_pred CcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHH---HHHhcC------
Confidence 578999999999987778999999987 999999999999999998 7678 99999996665 899998
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|+++||+++|++|.. ..+|.|.++.+.|.+|+.+.+
T Consensus 89 V~~iPT~~~fk~G~~----v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 89 VRRFPATLVFTDGKL----RGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp CCSSSEEEEESCC--------CEESCCCHHHHHHHHHHHH
T ss_pred CCcCCeEEEEeCCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 999999999998864 567899999999999998874
No 74
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.61 E-value=7.7e-16 Score=131.41 Aligned_cols=102 Identities=13% Similarity=0.159 Sum_probs=88.2
Q ss_pred ceeEEeCCCCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc-chhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~-~~~~~~~l~~~~~~~~~~ 212 (540)
..|..|+.++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+ +.+..||++ +++. ++++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~---~~~~~~----- 75 (111)
T 2pu9_C 5 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKT---LAKELG----- 75 (111)
T ss_dssp TSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHH---HHHHHC-----
T ss_pred CccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHH---HHHHcC-----
Confidence 4689999999999985 589999999999999999999999999999875 689999998 4554 889988
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|+++||+++|++|.. ...+.|.. .+.|.+++.+.
T Consensus 76 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 76 -IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp -CSBSSEEEEESSSSE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 999999999998864 45677874 89999998765
No 75
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.60 E-value=4.9e-16 Score=136.56 Aligned_cols=98 Identities=11% Similarity=0.102 Sum_probs=84.8
Q ss_pred eCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEE
Q 009206 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (540)
Q Consensus 141 lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl 220 (540)
++.+.++....++++++|.||++||++|+++.|.|+++++.+++.+.++.|||++++. ++++++ |.++||+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~---l~~~~~------v~~~Pt~ 100 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNES---LARKFS------VKSLPTI 100 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHH---HHHHTT------CCSSSEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHH---HHHHcC------CCCcCEE
Confidence 3444455555789999999999999999999999999999998778999999997765 899999 9999999
Q ss_pred EEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 009206 221 VAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 221 ~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~ 251 (540)
++|++|.. ...+.|.++.+.|.+|+.+
T Consensus 101 ~~~~~G~~----~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 101 ILLKNKTM----LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEETTEE----EEEESSCCCHHHHHHHHTT
T ss_pred EEEECCEE----EEEecCCCCHHHHHHHHHh
Confidence 99988854 5678899999999999854
No 76
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.60 E-value=9.2e-16 Score=149.04 Aligned_cols=103 Identities=20% Similarity=0.281 Sum_probs=93.5
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc---cceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~---~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.+..++.++|+..+.++++++|.||++||++|+.+.|.|+++|+.+.+. +.++.|||++++. +|++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------ 201 (241)
T 3idv_A 131 VTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETD---LAKRFD------ 201 (241)
T ss_dssp SSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHH---HHHHTT------
T ss_pred cceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHH---HHHHcC------
Confidence 4688999999999988899999999999999999999999999999765 6899999997665 999999
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|.+|.. ..|.|.++.++|++|+.+..
T Consensus 202 v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 202 VSGYPTLKIFRKGRP-----YDYNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp CCSSSEEEEEETTEE-----EECCSCCSHHHHHHHHHHHT
T ss_pred CcccCEEEEEECCeE-----EEecCCCCHHHHHHHHHhhh
Confidence 999999999998864 56999999999999999883
No 77
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.60 E-value=4.5e-16 Score=136.75 Aligned_cols=100 Identities=13% Similarity=0.086 Sum_probs=89.1
Q ss_pred eEEeCC-CCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt~-~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
|..|+. ++|++.+.++++++|.||++||++|+++.|.|+++++.+. .+.++.|||++++. +|++++ |.+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~---l~~~~~------v~~ 90 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSE---IVSKCR------VLQ 90 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHH---HHHHTT------CCS
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHH---HHHHcC------CCc
Confidence 788999 9999999889999999999999999999999999999984 47899999997665 899998 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|++|.. ...+.| .+.+.|.+|+.+.
T Consensus 91 ~Pt~~i~~~G~~----~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 LPTFIIARSGKM----LGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEeC-CCHHHHHHHHHHH
Confidence 999999988854 456788 7899999999876
No 78
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.60 E-value=5.7e-16 Score=149.75 Aligned_cols=105 Identities=16% Similarity=0.256 Sum_probs=94.6
Q ss_pred ceeEEeCCCCcccc-ccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 136 HAFNVVTSEDFPSI-FHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 136 ~~V~~lt~~~F~~~-v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
+.+..||.++|++. ++++++++|.|||+||++|+.+.|.|+++++.+.+.+.++.|||++++. +|++++ |
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~---l~~~~~------v 82 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPG---TAPKYG------I 82 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTT---TGGGGT------C
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHH---HHHHcC------C
Confidence 35789999999986 5889999999999999999999999999999998888999999997765 888888 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 83 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 83 RGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp CSBSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHS
T ss_pred CcCCEEEEEECCeE----EEEeccccChHHHHHHHHhhc
Confidence 99999999998864 467899999999999999873
No 79
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=2.2e-16 Score=140.52 Aligned_cols=103 Identities=16% Similarity=0.278 Sum_probs=87.8
Q ss_pred eeEEeCCCCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc-ccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.|..+|.++|++.+. .+++|+|.|||+||++|+++.|.|+++++.+.+ .+.++.|||++++. +|++++
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~---~~~~~~------ 78 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTD---VSTRYK------ 78 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHH---HHHHTT------
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHH---HHHHcc------
Confidence 578999999999984 345999999999999999999999999999986 57999999997665 889998
Q ss_pred ee------eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 214 RR------GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 214 V~------~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|. ++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 79 v~~~~~~~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 79 VSTSPLTKQLPTLILFQGGKE----AMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp CCCCSSSSCSSEEEEESSSSE----EEEESCBCSSSCBCCCCCCH
T ss_pred CcccCCcCCCCEEEEEECCEE----EEEecCcCchHHHHHHHhcc
Confidence 87 9999999998864 45678888877777776443
No 80
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.60 E-value=7.9e-16 Score=130.43 Aligned_cols=100 Identities=13% Similarity=0.182 Sum_probs=84.4
Q ss_pred eEEe-CCCCccccc--cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 138 FNVV-TSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 138 V~~l-t~~~F~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
|..+ +.++|++.+ .++++++|.||++||++|+++.|.|+++++.+ +...++.||+++++. ++++++ |
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~---~~~~~~------v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQG---TAATNN------I 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHH---HHHHTT------C
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHH---HHHhcC------C
Confidence 4455 568899998 57899999999999999999999999999998 446899999997665 889998 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|.. ...+.|. ..++|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 73 SATPTFQFFRNKVR----IDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp CSSSEEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EEEEeCC-CHHHHHHHHHHh
Confidence 99999999988854 4567885 456699998765
No 81
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.59 E-value=7.6e-17 Score=138.68 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=61.3
Q ss_pred ccccccccCccCCCCH--HHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhhhhhhhccch
Q 009206 36 PPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~--~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 102 (540)
..++|+||||+++|+. ++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||.+|..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 3589999999999999 999999999999999999864 78999999999999999999999998753
No 82
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.59 E-value=4.4e-16 Score=140.47 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=88.3
Q ss_pred eEEeCC-CCccccc--cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 138 FNVVTS-EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 138 V~~lt~-~~F~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
|..|+. ++|++.| .++++++|.|||+|||+|+.++|.++++|+++.+.+.|++||.++++. ++++|+ |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e---~a~~y~------V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPD---FNTMYE------L 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTTTT------C
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHH---HHHHcC------C
Confidence 456665 7898887 478899999999999999999999999999998888999999998776 889988 9
Q ss_pred eeeeEEEEeCCCCCCCCCc--c-------cccCCCC-HHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCM--T-------RFEGELS-VDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~--~-------~y~G~~~-~~~i~~fi~~~ 252 (540)
.+.||+++|++|+. . . +..|..+ .+.|.+++.+.
T Consensus 94 ~siPT~~fFk~G~~----v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 94 YDPVSVMFFYRNKH----MMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp CSSEEEEEEETTEE----EEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEE----EEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 99999999999964 2 2 5678876 88999998765
No 83
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.59 E-value=3.2e-16 Score=126.14 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=59.1
Q ss_pred ccccccccCccCC--CCHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhhhhhhhccch
Q 009206 36 PPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (540)
Q Consensus 36 ~~~~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 102 (540)
..++|++|||+++ ++.++||+|||+|++++|||++ ++.++|++|++||++|+|+.+|.. +.||..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~-~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSHALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CCHHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC-CCHHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 3589999999999 9999999999999999999997 578999999999999999999988 557654
No 84
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.59 E-value=5.8e-16 Score=130.41 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=88.4
Q ss_pred eEEeCC-CCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 138 FNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 138 V~~lt~-~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
|.++++ ++|++.+. ++++++|.||++||++|+++.|.++++++.+++...+..||+++++. ++++++ |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECED---IAMEYN------I 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH---HHHHTT------C
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHH---HHHHcC------C
Confidence 567888 88999885 78999999999999999999999999999997667999999996665 899998 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|++|.. ...+.| .+.+.|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK----VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp CSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHT
T ss_pred CcccEEEEEcCCcE----EEEEcC-CCHHHHHHHHHHh
Confidence 99999999988854 456788 7899999998764
No 85
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.59 E-value=8.8e-16 Score=131.16 Aligned_cols=101 Identities=9% Similarity=0.119 Sum_probs=84.0
Q ss_pred eEEeCC-CCccccccC---CCcEEEEEEecCCCCccCChHHHHHHHHHHh-cccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 138 FNVVTS-EDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 138 V~~lt~-~~F~~~v~~---~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
|..++. ++|++.+.+ +++++|.||++||++|+.+.|.|+++++.++ +.+.++.||+++++. ++++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~----- 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSE---ISELFE----- 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHH---HHHHTT-----
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHH---HHHHcC-----
Confidence 577888 999998865 8999999999999999999999999999863 346999999997665 899998
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...+.|.. .++|.+++.+.
T Consensus 74 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 74 -ISAVPYFIIIHKGTI----LKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp -CCSSSEEEEEETTEE----EEEECSCC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEECCEE----EEEecCCC-HHHHHHHHHHH
Confidence 999999999988854 45677874 55699998876
No 86
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.59 E-value=7e-16 Score=131.72 Aligned_cols=99 Identities=15% Similarity=0.267 Sum_probs=86.7
Q ss_pred EEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeee
Q 009206 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (540)
Q Consensus 139 ~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~P 218 (540)
...+.++|+..+.++++++|.||++||++|+++.|.|+++++.+.+ ..+..||+++++. ++++++ |.++|
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~---l~~~~~------v~~~P 79 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGD---VAQKNE------VSAMP 79 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCSSS
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHcC------CCccC
Confidence 4567788999998899999999999999999999999999999865 6899999997665 899999 99999
Q ss_pred EEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 219 tl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|+++|.+|+. ...+.|. +.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 80 TLLLFKNGKE----VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEECCEE----EEEEeCC-CHHHHHHHHHhh
Confidence 9999998754 4667888 679999998764
No 87
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.59 E-value=1.1e-15 Score=136.36 Aligned_cols=105 Identities=16% Similarity=0.174 Sum_probs=78.4
Q ss_pred ceeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
..|..++.++|...+..++.++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++. ++++++ |.
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~---l~~~~~------v~ 103 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPG---LAARYG------VR 103 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHH---HHHHTT------CC
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHH---HHHHCC------CC
Confidence 357889999999988443349999999999999999999999999998778999999997665 899998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 104 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 104 SVPTLVLFRRGAP----VATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCEEEEEeCCcE----EEEEeCCCCHHHHHHHHHHHH
Confidence 9999999988854 456889999999999998763
No 88
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.58 E-value=9.2e-16 Score=140.07 Aligned_cols=69 Identities=22% Similarity=0.443 Sum_probs=62.5
Q ss_pred CCccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCc---------HHHHHHHHHHHHHcCChhhhhhhhhccch
Q 009206 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS---------TADFLKIQYAYELLTDPLWKRNYDVYGID 102 (540)
Q Consensus 34 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~---------~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 102 (540)
....|||++|||+++++.++||+|||+|++++|||++++. .++|++|++||++|+||.+|+.||..+..
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 4467999999999999999999999999999999998743 37899999999999999999999987644
No 89
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=5.6e-16 Score=128.10 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=56.1
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--CcHHHHHHHHHHHHHcCChhhhhh
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRN 95 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~r~~ 95 (540)
..|||+||||+++++.++||+|||+|+++||||+++ ++.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 479999999999999999999999999999999985 678899999999999999998864
No 90
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.58 E-value=1.6e-16 Score=145.96 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=58.7
Q ss_pred ccccccccCccCCCC--HHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhhhhhhhccc
Q 009206 36 PPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~--~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~ 101 (540)
..|+|++|||+++|+ .++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||++|.
T Consensus 10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 469999999999999 5999999999999999999854 6899999999999999999999999996
No 91
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.58 E-value=5.3e-16 Score=132.28 Aligned_cols=102 Identities=16% Similarity=0.244 Sum_probs=88.6
Q ss_pred eeEEe-CCCCccccccC----CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 137 AFNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~~----~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
.|..+ +.++|++.+.+ +++++|.||++||++|+.+.|.|+++++.+.+.+.++.||+++++. ++++++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~---- 75 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAA---VAEAAG---- 75 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHH---HHHHHT----
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHH---HHHHcC----
Confidence 35677 45889998854 8999999999999999999999999999998777999999996655 889998
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...+.|. +.+.|.+|+.+.
T Consensus 76 --v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 76 --ITAMPTFHVYKDGVK----ADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp --CCBSSEEEEEETTEE----EEEEESC-CHHHHHHHHHHH
T ss_pred --CCcccEEEEEECCeE----EEEEcCC-CHHHHHHHHHHH
Confidence 999999999988854 4567898 999999999876
No 92
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.58 E-value=1.9e-15 Score=147.68 Aligned_cols=102 Identities=16% Similarity=0.125 Sum_probs=89.0
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEe--cCCCCccCChHHHHHHHHHHhc--ccceeeeec-----cchhhhhHHHHhCC
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYS--DGSYLCGQFSGAWKTIAALLEG--IANTGMVEL-----GDIRLATHLAERKP 207 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYa--pwC~~C~~l~p~~~~~A~~l~~--~~~v~~Vdc-----~~~~~~~~l~~~~~ 207 (540)
.|..||..||+++++++++|||.||| |||+ +.|.|+++|+.+.+ .+.|++||| ++++. ||++++
T Consensus 6 ~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~---l~~~~~ 78 (240)
T 2qc7_A 6 GALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNME---LSEKYK 78 (240)
T ss_dssp TCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHH---HHHHTT
T ss_pred CceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHH---HHHHcC
Confidence 47899999999988888999999999 9999 99999999999974 468999995 43554 999999
Q ss_pred CCccceee--eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 208 IGQIFFRR--GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 208 ~~~~~~V~--~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|+ +||||++|++|.. ..+..|.|.++.+.|++|+.+..
T Consensus 79 ------V~~~~~PTl~~f~~G~~--~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 79 ------LDKESYPVFYLFRDGDF--ENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ------CCGGGCSEEEEEETTCS--SCCEECCSCSCHHHHHHHHHHTT
T ss_pred ------CCCCCCCEEEEEeCCCc--CcceeecCCCCHHHHHHHHHHhc
Confidence 99 9999999999861 12578999999999999999873
No 93
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.57 E-value=3.5e-14 Score=137.65 Aligned_cols=201 Identities=7% Similarity=0.037 Sum_probs=148.0
Q ss_pred eEEe-CCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVV-TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~l-t~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
+.+| |.++|+++++++++++|-||++| |..+.++|.++|+.+ ....+|.+. ++. +|++++ |++
T Consensus 11 ~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~~~~F~~t~---~~~---v~~~~~------v~~ 74 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKF-PGVSFGIST---DSE---VLTHYN------ITG 74 (227)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTC-TTSEEEEEC---CHH---HHHHTT------CCS
T ss_pred CeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhC-CCceEEEEC---CHH---HHHHcC------CCC
Confidence 4566 45889998999999999999998 578999999999999 466787754 223 888988 888
Q ss_pred eeEEEEeCCCCCCCCCccccc----CCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEeCC-C-C
Q 009206 217 LPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-G-E 290 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~----G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~-~-~ 290 (540)
|+|++|+++.. ....|. |.++.++|.+|+... .+|.+..++.++ ...+.... -...+++|.+. + +
T Consensus 75 -p~i~lfk~~~~---~~~~~~~~~~g~~~~~~l~~fi~~~--~~plv~e~t~~n-~~~~~~~~--~~~~~l~f~~~~~~~ 145 (227)
T 4f9z_D 75 -NTICLFRLVDN---EQLNLEDEDIESIDATKLSRFIEIN--SLHMVTEYNPVT-VIGLFNSV--IQIHLLLIMNKASPE 145 (227)
T ss_dssp -SEEEEEETTTT---EEEEECHHHHHTCCHHHHHHHHHHH--CCCSEEECCHHH-HHHHHHSS--CCEEEEEEECTTSTT
T ss_pred -CeEEEEEecCc---ccccccccccCCCCHHHHHHHHHHh--CCCceeecCccc-HHHHhccC--CceEEEEEEcCCcch
Confidence 99999997532 245677 489999999999998 678777777655 34444432 12445566432 1 1
Q ss_pred --CCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCC--CCCEEEEEeCCCCceeee-cCCCChhHHHHHHHhh
Q 009206 291 --RASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY-YGSFNNSRLSEVMEQN 363 (540)
Q Consensus 291 --~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~--~~Ptlv~fk~~~~~~~~y-~G~~~~~~l~~fi~~~ 363 (540)
...+.++.+|..|++.+.|+.+...+.....+++.||+. .+|+|+++...+.....+ .|+++.+.|.+|++..
T Consensus 146 ~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 146 YEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 123566779999999988888875433345688999998 689999998544332233 4788999999999863
No 94
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.57 E-value=8.2e-16 Score=129.40 Aligned_cols=96 Identities=13% Similarity=0.205 Sum_probs=84.5
Q ss_pred CCCCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeE
Q 009206 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (540)
Q Consensus 142 t~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Pt 219 (540)
+.++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+ ..++.||+++++. ++++++ |.++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~---~~~~~~------v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQD---VASESE------VKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHH---HHHHTT------CCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHH---HHHHcC------CCcCcE
Confidence 4567888885 789999999999999999999999999999876 7899999997765 889998 999999
Q ss_pred EEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 220 l~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+++|.+|.. ...+.|. +.+.|.+|+.+.
T Consensus 77 ~~~~~~g~~----~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 77 FQFFKKGQK----VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECCeE----EEEEeCC-CHHHHHHHHHHh
Confidence 999988864 4668898 999999999765
No 95
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.56 E-value=7.4e-16 Score=131.95 Aligned_cols=101 Identities=11% Similarity=0.231 Sum_probs=89.1
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
....+|.++|++.++++++++|.||++||++|+++.|.++++++.+.+ +.+..||+++++. ++++++ |.+
T Consensus 10 ~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~---~~~~~~------v~~ 79 (112)
T 1syr_A 10 VKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSE---VTEKEN------ITS 79 (112)
T ss_dssp CEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHH---HHHHTT------CCS
T ss_pred EEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHH---HHHHcC------CCc
Confidence 457899999999998899999999999999999999999999998864 7899999997665 889998 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|++|.. ...+.|. +.+.|.+|+.+.
T Consensus 80 ~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 80 MPTFKVYKNGSS----VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp SSEEEEEETTEE----EEEEESC-CHHHHHHHHHTT
T ss_pred ccEEEEEECCcE----EEEEeCC-CHHHHHHHHHHh
Confidence 999999998854 4567898 999999998764
No 96
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.56 E-value=1.2e-15 Score=132.34 Aligned_cols=101 Identities=15% Similarity=0.200 Sum_probs=89.1
Q ss_pred eeEEeCCCCcccccc----CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 137 AFNVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
.+..++.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.+..||+++++. ++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~---~~~~~~----- 84 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKP---IAEQFS----- 84 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT-----
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHH---HHHHcC-----
Confidence 356788899999883 589999999999999999999999999999877 7999999997665 899999
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...+.|.. .+.|.+|+.+.
T Consensus 85 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 85 -VEAMPTFLFMKEGDV----KDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp -CCSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEeCCEE----EEEEeCcC-HHHHHHHHHHH
Confidence 999999999988854 45788998 99999999876
No 97
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.56 E-value=1.4e-15 Score=131.26 Aligned_cols=100 Identities=16% Similarity=0.230 Sum_probs=87.1
Q ss_pred eeEEeCC-CCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~-~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.|..++. ++|++.+. ++++++|.||++||++|+++.|.|+++++.+ .+.++.||+++++. ++++++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~---~~~~~~------ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEE---TARKYN------ 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHH---HHHHTT------
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHH---HHHHcC------
Confidence 3788888 89999885 7899999999999999999999999999887 46899999996665 899999
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...+.| .+.+.|.+|+.+.
T Consensus 83 v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK----VGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred CCccceEEEEeCCcE----EEEEeC-CCHHHHHHHHHHh
Confidence 999999999988854 456778 6899999998764
No 98
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.56 E-value=4.1e-15 Score=129.94 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=88.1
Q ss_pred eEEeCCCCcc-----ccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeee--ccchhhhhHHHHhCCCCc
Q 009206 138 FNVVTSEDFP-----SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--LGDIRLATHLAERKPIGQ 210 (540)
Q Consensus 138 V~~lt~~~F~-----~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vd--c~~~~~~~~l~~~~~~~~ 210 (540)
+..++..+|+ ....++++++|.||++||++|+++.|.++++++.+.+.+.+..|| +++++. ++++++
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~---~~~~~~--- 79 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNID---LAYKYD--- 79 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHH---HHHHTT---
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHH---HHHHcC---
Confidence 4567777777 445678999999999999999999999999999997667999999 886654 899998
Q ss_pred cceeeeeeEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 211 ~~~V~~~Ptl~~f~-~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|. +|.. ...+.|..+.+.|.+|+.+..
T Consensus 80 ---v~~~Pt~~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 80 ---ANIVPTTVFLDKEGNK----FYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp ---CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHHHC
T ss_pred ---CcceeEEEEECCCCCE----EEEecCCCCHHHHHHHHHHHh
Confidence 99999999998 6653 456889999999999998873
No 99
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.56 E-value=1.8e-15 Score=129.36 Aligned_cols=99 Identities=13% Similarity=0.147 Sum_probs=86.4
Q ss_pred EEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeee
Q 009206 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (540)
Q Consensus 139 ~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~P 218 (540)
..++.++| +.+.++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++. ++++++ |.++|
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~---l~~~~~------v~~~P 74 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPE---LMKELG------FERVP 74 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHH---HHHHTT------CCSSC
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHH---HHHHcC------CcccC
Confidence 56788999 777778999999999999999999999999998865 46899999996655 899998 99999
Q ss_pred EEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 219 tl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|+++|++|.. ..++.|..+.+.|..++.+.
T Consensus 75 t~~~~~~G~~----v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 75 TLVFIRDGKV----AKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp EEEEEESSSE----EEEEESCCCHHHHHHHHHTC
T ss_pred EEEEEECCEE----EEEEcCCCCHHHHHHHHHHH
Confidence 9999988864 56788999999999998765
No 100
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.56 E-value=4.7e-16 Score=134.50 Aligned_cols=101 Identities=13% Similarity=0.180 Sum_probs=82.6
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch---hhhhHHHHhCCCCcccee
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFR 214 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~---~~~~~l~~~~~~~~~~~V 214 (540)
+..++.++|...+.++++++|.||||||++|+++.|.|+++++.+.. .+..+|++.. .....++++++ |
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~------i 85 (118)
T 1zma_A 14 LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYG------I 85 (118)
T ss_dssp SEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHT------C
T ss_pred hhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcC------C
Confidence 56788899998888889999999999999999999999999998764 3444544422 12335888988 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~ 250 (540)
.++||+++|.+|.. ...+.|.++.+.|.+|+.
T Consensus 86 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQI----NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEE----EEECCTTCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEE----EEEecCCCCHHHHHHHhh
Confidence 99999999998854 467899999999999974
No 101
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.55 E-value=2.7e-15 Score=130.67 Aligned_cols=102 Identities=14% Similarity=0.196 Sum_probs=87.8
Q ss_pred ceeEEeCCCCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc-chhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~-~~~~~~~l~~~~~~~~~~ 212 (540)
..|..++.++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+ ..+..||++ +++. ++++++
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~---~~~~~~----- 88 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKT---LAKELG----- 88 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHH---HHHHHC-----
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHH---HHHHcC-----
Confidence 3578999999999884 789999999999999999999999999998875 689999998 4444 889988
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|+++||+++|++|.. ...+.|.. .+.|.+++.+.
T Consensus 89 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 89 -IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp -CSSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 999999999998864 45677876 89999998764
No 102
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.33 E-value=3.1e-16 Score=131.65 Aligned_cols=102 Identities=21% Similarity=0.280 Sum_probs=89.3
Q ss_pred eEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
|.+|+.++|.+.+ +++++++|.||++||++|+++.|.++++++.+.+...++.||+++++. ++++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~------v~~ 73 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPN---TAAQYG------IRS 73 (106)
Confidence 5789999998776 778999999999999999999999999999998777999999996655 888888 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+||+++|++|.. ...|.|..+.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 74 IPTLLLFKNGQV----VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999999987754 45788999999999988654
No 103
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.55 E-value=7.7e-13 Score=136.73 Aligned_cols=282 Identities=12% Similarity=0.184 Sum_probs=187.9
Q ss_pred eeEEeCC-CCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~-~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..|++ +++++++..+++++|-||.+-++.+ ...|.++|..+ ....|+.++- .. +|++++ |+
T Consensus 18 ~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~~---~~---v~~~~~------v~ 81 (361)
T 3uem_A 18 FATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITSN---SD---VFSKYQ------LD 81 (361)
T ss_dssp SSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEECC---HH---HHHHTT------CS
T ss_pred cceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEECc---HH---HHHHhC------CC
Confidence 4566754 7788888889999999998766654 57999999988 4456665443 34 889998 87
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEe-CCC---CC
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFS-KTG---ER 291 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~-~~~---~~ 291 (540)
+ |+|++|+.... ....|.|..+.++|.+|+... .+|.+..++.++ ...+.... .++.+++|. +.+ ..
T Consensus 82 ~-~~i~lfk~f~~---~~~~~~g~~~~~~i~~fi~~~--~~p~v~~~~~~~-~~~~~~~~--~~~~~v~F~~~~~~~~~~ 152 (361)
T 3uem_A 82 K-DGVVLFKKFDE---GRNNFEGEVTKENLLDFIKHN--QLPLVIEFTEQT-APKIFGGE--IKTHILLFLPKSVSDYDG 152 (361)
T ss_dssp S-SEEEEEESSTT---SEEECCSCCCHHHHHHHHHHH--SSCSEEECSTTT-HHHHHSCS--CCEEEEEECCSSSSSHHH
T ss_pred C-CeEEEEEecCC---CccccCCcCCHHHHHHHHHHc--CCCcceecCccc-HHHHhcCC--CCcEEEEEEeCCchhHHH
Confidence 8 99999986321 247899999999999999998 577766666655 34444432 224445453 322 22
Q ss_pred CcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCC--CCEEEEEeCCCCceeeec---CCCChhHHHHHHHhhccC
Q 009206 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--APAIVFLKDPGVKPVVYY---GSFNNSRLSEVMEQNKLQ 366 (540)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~--~Ptlv~fk~~~~~~~~y~---G~~~~~~l~~fi~~~~~~ 366 (540)
..+.++.+|..|++.+.|+.+.....+...+++.|||+. .|+++++..++ ....|. |.++.+.|.+|+....-.
T Consensus 153 ~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l~g 231 (361)
T 3uem_A 153 KLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFLEG 231 (361)
T ss_dssp HHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHhcC
Confidence 346778899999988888887644223578999999987 99999998643 233454 788999999999875322
Q ss_pred C------------------CccccccchhhhccCCCCCCCCCCCCceeEEEEEe-cCCChhhHHHHHHHHHHHHhhcccc
Q 009206 367 E------------------LPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILA-GRLSPELNKMRETIRRVQETLLSDD 427 (540)
Q Consensus 367 ~------------------lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~-~~~~~~~~~~~~~l~~~~~~~~~~~ 427 (540)
. +..++..+..+.... .++ ..+|.| .+--.....+...+.++++
T Consensus 232 ~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~------~~k-----~~lv~f~a~wC~~C~~~~p~~~~la~------ 294 (361)
T 3uem_A 232 KIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFD------EKK-----NVFVEFYAPWCGHCKQLAPIWDKLGE------ 294 (361)
T ss_dssp CSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTC------TTC-----EEEEEEECTTCHHHHHHHHHHHHHHH------
T ss_pred CCcccccCCCCCcccccCCcEEeecCchhhhccc------CCC-----cEEEEEecCcCHhHHHHHHHHHHHHH------
Confidence 1 222333333222211 112 334444 3333445666677777776
Q ss_pred ccccccccCCchHHHHhccC-CceEEEEEechhhHHHHHhhccCCccccccCCccCCCCCCeEEEEE
Q 009206 428 ESNAADTDQSLAPAAVAFRN-KRLTFAWLDGEAQDRYCSFYLFSETSFETCGARRDMSDVPRLFIVR 493 (540)
Q Consensus 428 ~~~~~~~~~~~~~~A~~~~~-~~~~f~wvd~~~q~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 493 (540)
.+++ ..+.|++||++.+. | .++.....|.++++.
T Consensus 295 ----------------~~~~~~~v~~~~vd~~~~~---------------~-~~~~v~~~Pt~~~~~ 329 (361)
T 3uem_A 295 ----------------TYKDHENIVIAKMDSTANE---------------V-EAVKVHSFPTLKFFP 329 (361)
T ss_dssp ----------------HTTTCSSEEEEEEETTTCB---------------C-SSCCCCSSSEEEEEC
T ss_pred ----------------HhccCCcEEEEEEECCccc---------------h-hhcCCcccCeEEEEE
Confidence 4433 36999999997643 2 235677789988883
No 104
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.55 E-value=1.2e-15 Score=138.31 Aligned_cols=99 Identities=17% Similarity=0.216 Sum_probs=87.5
Q ss_pred eCCCCccccc--cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeee
Q 009206 141 VTSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (540)
Q Consensus 141 lt~~~F~~~v--~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~P 218 (540)
.+.++|+..+ .++++++|.|||+||++|+++.|.|+++++++.+.+.++.||+++++. ++++++ |.++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~---l~~~~~------v~~~P 79 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAV---YTQYFD------ISYIP 79 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCH---HHHHTT------CCSSS
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHH---HHHHcC------CCccC
Confidence 4567898888 568999999999999999999999999999998878999999997765 899999 99999
Q ss_pred EEEEeCCCCCCCCCc---------ccccC-CCCHHHHHHHHHHh
Q 009206 219 SLVAFPPGCKSSDCM---------TRFEG-ELSVDAVTDWFATA 252 (540)
Q Consensus 219 tl~~f~~g~~~~~~~---------~~y~G-~~~~~~i~~fi~~~ 252 (540)
|+++|++|.. . ..+.| ..+.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 80 STVFFFNGQH----MKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEEEEETTEE----EEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred eEEEEECCeE----EEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 9999999864 3 46789 89999999999775
No 105
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.54 E-value=2.9e-15 Score=125.63 Aligned_cols=99 Identities=12% Similarity=0.251 Sum_probs=85.4
Q ss_pred EEeCC-CCcccccc--CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 139 NVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 139 ~~lt~-~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
..+++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+. ...++.||+++++. ++++++ |.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~------v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEE---AAAKYS------VT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHH---HHHHTT------CC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHH---HHHHcC------Cc
Confidence 45676 88988885 78999999999999999999999999999886 46899999997665 889998 99
Q ss_pred eeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++|.+|.. ...+.| .+.+.|.+|+.+.
T Consensus 72 ~~Pt~~~~~~g~~----~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 72 AMPTFVFIKDGKE----VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp SSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEeC-CCHHHHHHHHHhh
Confidence 9999999998854 456778 6899999998764
No 106
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.53 E-value=3.2e-15 Score=130.05 Aligned_cols=102 Identities=17% Similarity=0.264 Sum_probs=89.0
Q ss_pred eeEEeCC-CCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 137 ~V~~lt~-~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
.+..++. ++|++.++++++++|.||++||++|+.+.|.|+++++.+.+. +.+..||+++++. ++++++ |
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~---~~~~~~------v 86 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQ---IAQEVG------I 86 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHH---HHHHHT------C
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHH---HHHHcC------C
Confidence 4566666 889999988999999999999999999999999999988876 6899999997665 889998 9
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|.+|.. ...+.|. +.+.|.+|+.+.
T Consensus 87 ~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 87 RAMPTFVFFKNGQK----IDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp CSSSEEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EeeEcCC-CHHHHHHHHHHh
Confidence 99999999988854 4567888 999999999875
No 107
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.53 E-value=1.6e-15 Score=134.86 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=88.4
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeec---------cchhhhhHHHHhCC
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL---------GDIRLATHLAERKP 207 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc---------~~~~~~~~l~~~~~ 207 (540)
.|..+|.++|++.+.+ +++|.|||+||++|+++.|.|+++++.+. +.++.||+ ++++ .++++++
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~---~l~~~~~ 89 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAAR---LEMNKAG 89 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHH---HHHHHHT
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhH---HHHHHcC
Confidence 6789999999999866 99999999999999999999999998876 78999999 5444 4889998
Q ss_pred CCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 208 ~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|.+|.. ...+.|..+.+.+..++.+.
T Consensus 90 ------v~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 ------VEGTPTLVFYKEGRI----VDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp ------CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ------CceeCeEEEEcCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999999998864 56789999999999999887
No 108
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.53 E-value=2e-15 Score=130.17 Aligned_cols=99 Identities=11% Similarity=0.160 Sum_probs=84.3
Q ss_pred eEEeCC-CCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt~-~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
+..+++ ++|+++++++++++|.||++||++|+++.|.|+++++.+.+ +.+..||+++++. ++++++ |.+
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~---l~~~~~------v~~ 83 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPD---IAKECE------VTA 83 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHH---HHHHTT------CCS
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHH---HHHHCC------CCc
Confidence 345555 55677778889999999999999999999999999999877 8999999997665 899998 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~ 251 (540)
+||+++|++|.. ...+.|.. .+.|.+|+.+
T Consensus 84 ~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 84 MPTFVLGKDGQL----IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp BSEEEEEETTEE----EEEEESSC-HHHHHHHHHT
T ss_pred ccEEEEEeCCeE----EEEEeCCC-HHHHHHHHHh
Confidence 999999988854 45688988 9999998753
No 109
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.52 E-value=3.9e-15 Score=138.13 Aligned_cols=65 Identities=14% Similarity=0.262 Sum_probs=58.3
Q ss_pred CccccccccCccCCCC--HHHHHHHHHHHHHhcCCCCCCCc--------HHHHHHHHHHHHHcCChhhhhhhhhc
Q 009206 35 FPPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIPS--------TADFLKIQYAYELLTDPLWKRNYDVY 99 (540)
Q Consensus 35 ~~~~~y~iLgv~~~a~--~~~Ik~ayr~l~~~~HPD~~~~~--------~~~f~~i~~Ay~~L~d~~~r~~yd~~ 99 (540)
.+.|||++|||+++++ .++||++||+|+++||||++++. .++|..|++||++|+||.+|..||..
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 4679999999999998 99999999999999999998743 36799999999999999999999974
No 110
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.52 E-value=9.6e-16 Score=156.09 Aligned_cols=67 Identities=24% Similarity=0.442 Sum_probs=0.0
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--CcHHHHHHHHHHHHHcCChhhhhhhhhccch
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~ 102 (540)
..|||++|||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||+++..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 469999999999999999999999999999999886 4577899999999999999999999998544
No 111
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.51 E-value=5.4e-15 Score=128.67 Aligned_cols=99 Identities=11% Similarity=0.173 Sum_probs=79.7
Q ss_pred eeEEeCCCCccccc-cCCC--cEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIF-HDSK--PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v-~~~~--~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
.|.++|.++|.+.| ++.+ +++|.||||||++|+.+.|.++++|+++. ..+|.+||+++. +++++
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~------~~~~~------ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC------IQHYH------ 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT------STTCC------
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh------HHHCC------
Confidence 46889999999887 4443 89999999999999999999999999885 468999999942 46666
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCC-------CCHHHHHHHHHHh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGE-------LSVDAVTDWFATA 252 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~-------~~~~~i~~fi~~~ 252 (540)
|+++||+++|++|.. ..++.|. .+.++|..++.+.
T Consensus 71 v~~~PT~~~fk~G~~----v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 71 DNCLPTIFVYKNGQI----EAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp GGGCSEEEEEETTEE----EEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCCEEEEEECCEE----EEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999964 4455553 3677777776553
No 112
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.51 E-value=5.5e-15 Score=134.22 Aligned_cols=103 Identities=16% Similarity=0.224 Sum_probs=87.5
Q ss_pred ceeEEeCC-CCccccccC--CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTS-EDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~-~~F~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
..|..++. ++|+..+.+ +++++|.||++||++|+++.|.|+++++.+. .+.++.|||++++. +|++++
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~---l~~~~~----- 82 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPE---VSEKYE----- 82 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH---HHHHTT-----
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHH---HHHHcC-----
Confidence 35677874 889988865 8999999999999999999999999999874 46899999997765 899998
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|.+|.. ...+.| .+.+.|.+|+.+.+
T Consensus 83 -v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 83 -ISSVPTFLFFKNSQK----IDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp -CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHHS
T ss_pred -CCCCCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHHh
Confidence 999999999997753 345677 57889999999874
No 113
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.50 E-value=8.5e-15 Score=130.19 Aligned_cols=105 Identities=10% Similarity=0.146 Sum_probs=88.7
Q ss_pred eEEeC-CCCcccccc----CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 138 FNVVT-SEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 138 V~~lt-~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
+..++ .++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++. ++++++
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~---~~~~~~----- 96 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSD---FSASWE----- 96 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH---HHHHTT-----
T ss_pred EEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHH---HHHHcC-----
Confidence 45554 688998873 58899999999999999999999999999884 46899999997665 899999
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCC
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp 257 (540)
|.++||+++|++|.. ...+.|. +.+.|.+++.+.+..+|
T Consensus 97 -v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~~~~~~ 135 (139)
T 3d22_A 97 -IKATPTFFFLRDGQQ----VDKLVGA-NKPELHKKITAILDSLP 135 (139)
T ss_dssp -CCEESEEEEEETTEE----EEEEESC-CHHHHHHHHHHHHHTSC
T ss_pred -CCcccEEEEEcCCeE----EEEEeCC-CHHHHHHHHHHHhccCC
Confidence 999999999988854 4567788 89999999998865554
No 114
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.49 E-value=3.4e-15 Score=122.36 Aligned_cols=59 Identities=10% Similarity=0.084 Sum_probs=54.2
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC----cHHHHHHHHHHHHHcCChhhhh
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKR 94 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~----~~~~f~~i~~Ay~~L~d~~~r~ 94 (540)
..++|+||||+++|+.++||+|||+|+++||||++++ +.++|++|++||++|+|...|.
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 5689999999999999999999999999999999986 3678999999999999987763
No 115
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.49 E-value=1.3e-14 Score=139.83 Aligned_cols=101 Identities=16% Similarity=0.098 Sum_probs=87.6
Q ss_pred EEeCCCCccccccCCCcE-EEEEEecCCCCccCChHHHHHHHHHHh----cccceeeeeccchhhhhHHHHhCCCCccce
Q 009206 139 NVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 139 ~~lt~~~F~~~v~~~~~~-lV~FYapwC~~C~~l~p~~~~~A~~l~----~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (540)
..++.++|+.+...++++ +|.||||||++|+++.|.|+++++.+. +.+.++.|||++++. +|++++
T Consensus 119 ~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~---l~~~~~------ 189 (226)
T 1a8l_A 119 TNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPE---WADQYN------ 189 (226)
T ss_dssp CCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHH---HHHHTT------
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHH---HHHhCC------
Confidence 457777887776666666 999999999999999999999999997 467999999997665 899999
Q ss_pred eeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 214 V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 190 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 190 VMAVPKIVIQVNGED----RVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCSSCEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CcccCeEEEEeCCce----eEEEcCCCCHHHHHHHHHHh
Confidence 999999999998854 46789999999999999875
No 116
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.49 E-value=1.1e-14 Score=135.71 Aligned_cols=69 Identities=16% Similarity=0.361 Sum_probs=61.8
Q ss_pred cCCCCcccccccc------CccC-CCCHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhhhhhhhc
Q 009206 31 LPRSFPPSHYDAL------GIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVY 99 (540)
Q Consensus 31 ~~~~~~~~~y~iL------gv~~-~a~~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~ 99 (540)
...+...|||++| |+++ +++.++||+|||+|+++||||+++++.++|++|++||++|+||.+|..||..
T Consensus 5 ~~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 5 VQRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp --CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred cCCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 4566678999999 4665 8999999999999999999999988888999999999999999999999984
No 117
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.48 E-value=9.7e-15 Score=127.81 Aligned_cols=101 Identities=12% Similarity=0.136 Sum_probs=86.3
Q ss_pred eeEEe-CCCCcccccc----CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
.|..+ |.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++. ++++++
T Consensus 17 ~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~---l~~~~~---- 88 (124)
T 1xfl_A 17 QVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKS---VASDWA---- 88 (124)
T ss_dssp CCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHH---HHHHTT----
T ss_pred cEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHH---HHHHcC----
Confidence 46777 5688998884 58999999999999999999999999999886 46899999997665 899999
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...+.| .+.+.|.+++.+.
T Consensus 89 --v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 89 --IQAMPTFMFLKEGKI----LDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp --CCSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred --CCccCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHh
Confidence 999999999988854 456778 5899999998775
No 118
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.48 E-value=1.1e-14 Score=134.56 Aligned_cols=63 Identities=11% Similarity=0.255 Sum_probs=58.2
Q ss_pred ccccccCccCCC--CHHHHHHHHHHHHHhcCCCCCCCc--------HHHHHHHHHHHHHcCChhhhhhhhhcc
Q 009206 38 SHYDALGIKPYS--SVEQVKEAYEKFSSKWNSGEEIPS--------TADFLKIQYAYELLTDPLWKRNYDVYG 100 (540)
Q Consensus 38 ~~y~iLgv~~~a--~~~~Ik~ayr~l~~~~HPD~~~~~--------~~~f~~i~~Ay~~L~d~~~r~~yd~~g 100 (540)
|||++|||++++ +.++||++||+|+++||||++++. .++|..|++||++|+||.+|..||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 799999999999 999999999999999999998743 257999999999999999999999864
No 119
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.48 E-value=9.5e-15 Score=131.23 Aligned_cols=98 Identities=10% Similarity=0.102 Sum_probs=80.8
Q ss_pred CCCCccccc-c-CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeE
Q 009206 142 TSEDFPSIF-H-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (540)
Q Consensus 142 t~~~F~~~v-~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Pt 219 (540)
+.++|+..+ + ++++++|.|||+||++|+.+.|.++++++.+++.+.++.||+++++. ++++++ |+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~---~~~~~~------i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPD---FNKMYE------LYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCT---TTTSSC------SCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHH---HHHHcC------CCCCCE
Confidence 457788766 4 68999999999999999999999999999998778999999997765 788888 999999
Q ss_pred EEEeCCCCCCCCCcc---------cccCCCC-HHHHHHHHHHh
Q 009206 220 LVAFPPGCKSSDCMT---------RFEGELS-VDAVTDWFATA 252 (540)
Q Consensus 220 l~~f~~g~~~~~~~~---------~y~G~~~-~~~i~~fi~~~ 252 (540)
+++|.+|.. .. ...|..+ .+.+.+++.+.
T Consensus 81 ~~~~~~G~~----v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 81 VMFFFRNKH----IMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEEEETTEE----EEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEEEECCcE----EEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 999998853 11 2445553 78888888765
No 120
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.48 E-value=3.5e-15 Score=158.23 Aligned_cols=103 Identities=21% Similarity=0.337 Sum_probs=85.5
Q ss_pred ceeEEeCCCCccccccC--CCcEEEEEEecCCCCccCChHHHHHHHHHHh---c-----ccceeeeeccchhhhhHHHHh
Q 009206 136 HAFNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---G-----IANTGMVELGDIRLATHLAER 205 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~---~-----~~~v~~Vdc~~~~~~~~l~~~ 205 (540)
+.|..||.++|+..+.+ +++|||.||||||++|+++.|.|+++++.+. + .+.+++|||++++. +|++
T Consensus 23 ~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~---la~~ 99 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVD---LCRK 99 (470)
T ss_dssp TTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHH---HHHH
T ss_pred CCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHH---HHHH
Confidence 46899999999999854 4799999999999999999999999999987 3 46899999997765 9999
Q ss_pred CCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 009206 206 KPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 206 ~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~ 250 (540)
++ |.++||+++|.+|.. .....|.|.++.+.| .|+.
T Consensus 100 y~------V~~~PTlilf~~gg~--~~~~~y~G~r~~e~L-~fI~ 135 (470)
T 3qcp_A 100 YD------INFVPRLFFFYPRDS--CRSNEECGTSSLEHV-AFEN 135 (470)
T ss_dssp TT------CCSSCEEEEEEESSC--CCTTSCCCCCCEEEE-ECSC
T ss_pred cC------CCccCeEEEEECCCc--eEEEEeeCCCCHHHH-HHHH
Confidence 99 999999999976543 235678888776655 4443
No 121
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.47 E-value=1.9e-14 Score=118.35 Aligned_cols=53 Identities=17% Similarity=0.290 Sum_probs=48.7
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC------cHHHHHHHHHHHHHcCC
Q 009206 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTD 89 (540)
Q Consensus 37 ~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~Ay~~L~d 89 (540)
.++|++|||++.||.++||+|||+++++||||++++ +.++|++|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 589999999999999999999999999999999875 35689999999999964
No 122
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.47 E-value=1.7e-14 Score=123.95 Aligned_cols=102 Identities=16% Similarity=0.170 Sum_probs=86.3
Q ss_pred eeEEe-CCCCcccccc----CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
.|..+ +.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++. ++++++
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~---~~~~~~---- 78 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKD---VAEAYN---- 78 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHH---HHHHTT----
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHH---HHHHcC----
Confidence 45667 4688998884 38999999999999999999999999999886 46899999996655 889998
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|++|.. ...+.| .+.+.|.+++.+.+
T Consensus 79 --v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 79 --VEAMPTFLFIKDGEK----VDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp --CCSBSEEEEEETTEE----EEEEES-CCHHHHHHHHHHHH
T ss_pred --CCcCcEEEEEeCCeE----EEEecC-CCHHHHHHHHHHHh
Confidence 999999999988854 456678 58999999998874
No 123
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.47 E-value=3.3e-14 Score=153.87 Aligned_cols=104 Identities=15% Similarity=0.263 Sum_probs=89.3
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHh-c--ccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-G--IANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~-~--~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
..|..|+.++|+..+ +++++|||.||||||+||+.+.|.|+++++.+. + .+.+++|||+.+.. .. ++
T Consensus 358 ~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~----~~-~~---- 428 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDV----RG-VV---- 428 (504)
T ss_dssp CSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCC----SS-CC----
T ss_pred ccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCcccc----cc-CC----
Confidence 468999999999987 678999999999999999999999999999987 3 45899999996542 22 55
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|+++||+++|++|.. .....|.|.++.++|++|+.+.
T Consensus 429 --v~~~Pt~~~~~~G~~--~~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 429 --IEGYPTIVLYPGGKK--SESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp --CSSSSEEEEECCTTS--CCCCBCCSCCCHHHHHHHHHHH
T ss_pred --ceecCeEEEEeCCce--ecceEecCCCCHHHHHHHHHhc
Confidence 999999999998853 1246799999999999999987
No 124
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.47 E-value=2.4e-14 Score=127.30 Aligned_cols=101 Identities=10% Similarity=0.150 Sum_probs=82.8
Q ss_pred cceeEEeCCCCccccccC---CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 135 VHAFNVVTSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 135 ~~~V~~lt~~~F~~~v~~---~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
+..|..||.++|.+.+.+ +++++|.|||+||++|+.+.|.|+++++.+. .+.+++||+++.. ++++
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~------~~~~---- 77 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI------EHYH---- 77 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC------SSCC----
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc------ccCC----
Confidence 345788899999998842 3699999999999999999999999999874 4689999999543 4555
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCC-------CHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGEL-------SVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~-------~~~~i~~fi~~~ 252 (540)
|.++||+++|.+|.. ...+.|.. +.+.|..++.+.
T Consensus 78 --i~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 78 --DNCLPTIFVYKNGQI----EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp --SSCCSEEEEESSSSC----SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEEECCEE----EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999999999998864 45566654 788999998876
No 125
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.46 E-value=2.9e-14 Score=135.65 Aligned_cols=64 Identities=11% Similarity=0.116 Sum_probs=57.6
Q ss_pred CccccccccCccCC--CCHHHHHHHHHHHHHhcCCCCCCCc--------HHHHHHHHHHHHHcCChhhhhhhhh
Q 009206 35 FPPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIPS--------TADFLKIQYAYELLTDPLWKRNYDV 98 (540)
Q Consensus 35 ~~~~~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPD~~~~~--------~~~f~~i~~Ay~~L~d~~~r~~yd~ 98 (540)
...|||++|||+++ ++.++||++||+|+++||||++++. .++|++|++||++|+||.+|+.||.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 35799999999986 7899999999999999999998742 3469999999999999999999985
No 126
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.46 E-value=2.5e-14 Score=126.81 Aligned_cols=103 Identities=10% Similarity=0.130 Sum_probs=84.8
Q ss_pred ceeEEeCC-CCccccccC--CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTS-EDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~-~~F~~~v~~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
..|.+++. ++|+..+.+ +++++|.|||+||++|+++.|.|+++++.+ .+.+..||+++++. ++++++
T Consensus 20 ~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~---l~~~~~----- 89 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPK---LNDQHN----- 89 (133)
T ss_dssp EEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHH---HHHHTT-----
T ss_pred ccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHH---HHHhcC-----
Confidence 35788886 788888853 579999999999999999999999998776 36899999997665 889998
Q ss_pred eeeeeeEEEEeC--CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFP--PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~--~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|. +|.. .....+.|. +.+.|.+++.+.
T Consensus 90 -v~~~Pt~~~~~~~~g~g--~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 90 -IKALPTFEFYFNLNNEW--VLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp -CCSSSEEEEEEEETTEE--EEEEEEESC-CHHHHHHHHHHH
T ss_pred -CCCCCEEEEEEecCCCe--EEEEEEcCC-CHHHHHHHHHHH
Confidence 99999999996 7741 013567787 899999999876
No 127
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.46 E-value=2.4e-14 Score=132.31 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=56.0
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCC------cHHHHHHHHHHHHHcCChhhhhhh
Q 009206 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNY 96 (540)
Q Consensus 37 ~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~------~~~~f~~i~~Ay~~L~d~~~r~~y 96 (540)
.|+|++|||++.|+.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 699999999999999999999999999999999874 356899999999999999999877
No 128
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.46 E-value=2.7e-12 Score=126.28 Aligned_cols=172 Identities=15% Similarity=0.131 Sum_probs=124.4
Q ss_pred cCCcccccccchhhhhhhhhcCCCceEEEEEeCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEE
Q 009206 255 KLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAI 334 (540)
Q Consensus 255 ~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptl 334 (540)
..|++..+++.+.++.|+.... .++|.+|.+.+......+..+|..+++.+.|+.+. .+.++++|+++. |+|
T Consensus 4 ~gP~v~~l~s~~~~~~~l~~~~--v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i 75 (252)
T 2h8l_A 4 GSPASVPLRTEEEFKKFISDKD--ASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGI 75 (252)
T ss_dssp --CCEEECCSHHHHHHHHTSSS--CEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEE
T ss_pred CCCCceeecCHHHHHHHhhcCC--eEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcE
Confidence 3677777766555788887532 34444665543334466778999999999998874 246999999985 999
Q ss_pred EEEeC------CCCceeee-cCCCChhHHHHHHHhhccCCCccccccchhhhccCCCCCCCCCCCCceeEEEEEecCCCh
Q 009206 335 VFLKD------PGVKPVVY-YGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSP 407 (540)
Q Consensus 335 v~fk~------~~~~~~~y-~G~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~~~~ 407 (540)
++|++ .++.++.| .|.++.+.|.+||..+.+|++++++..|..+. ... .+|++++.....
T Consensus 76 ~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~-~~~------------~~~v~~~~~~~~ 142 (252)
T 2h8l_A 76 ILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLI-QGK------------DLLIAYYDVDYE 142 (252)
T ss_dssp EEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHH-SSS------------SEEEEEECCBTT
T ss_pred EEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhh-cCC------------CeEEEEeecchh
Confidence 99986 34677889 99999999999999999999999999997663 211 377776643221
Q ss_pred ----hhHHHHHHHHHHHHhhccccccccccccCCchHHHHhcc--CCceEEEEEechhhHHHHHhhcc
Q 009206 408 ----ELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFR--NKRLTFAWLDGEAQDRYCSFYLF 469 (540)
Q Consensus 408 ----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~--~~~~~f~wvd~~~q~~f~~~~~~ 469 (540)
..+..++.++++|+ .++ ++.+.|+|+|++.+..+++.|-.
T Consensus 143 ~~~~~~~~~~~~~~~vA~----------------------~~~~k~~~~~F~~~d~~~~~~~~~~fgl 188 (252)
T 2h8l_A 143 KNAKGSNYWRNRVMMVAK----------------------KFLDAGHKLNFAVASRKTFSHELSDFGL 188 (252)
T ss_dssp TBHHHHHHHHHHHHHHHH----------------------HHHHTTCCCEEEEEETTTTHHHHGGGTC
T ss_pred hcchhHHHHHHHHHHHHH----------------------HccccCceEEEEEEchHHHHHHHHHcCC
Confidence 23345666666666 444 34599999999999988888755
No 129
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.46 E-value=3.8e-14 Score=152.38 Aligned_cols=106 Identities=18% Similarity=0.269 Sum_probs=92.7
Q ss_pred ceeEEeCCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc--cceeeeeccchhhhhHHHHhCCCCccc
Q 009206 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI--ANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 136 ~~V~~lt~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~--~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
..|..++.++|+..+ ++++++||+||||||++|+++.|.|+++++.+++. +.++.||++.+ . ++++++
T Consensus 352 ~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~-~---~~~~~~----- 422 (481)
T 3f8u_A 352 GPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-D---VPSPYE----- 422 (481)
T ss_dssp SSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS-C---CCTTCC-----
T ss_pred CCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch-h---hHhhCC-----
Confidence 357899999999988 55899999999999999999999999999999874 58999999966 2 667777
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|++|.. ..+..|.|.++.++|.+|+.+..
T Consensus 423 -v~~~Pt~~~~~~~~~--~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 423 -VRGFPTIYFSPANKK--LNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp -CCSSSEEEEECTTCT--TSCEECCSCCSHHHHHHHHHHHC
T ss_pred -CcccCEEEEEeCCCe--EeeeEeCCCCCHHHHHHHHHHhc
Confidence 999999999998864 12578999999999999999983
No 130
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.45 E-value=1.5e-14 Score=113.93 Aligned_cols=57 Identities=16% Similarity=0.053 Sum_probs=52.6
Q ss_pred ccccccccCccC-CCCHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCChhhh
Q 009206 36 PPSHYDALGIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWK 93 (540)
Q Consensus 36 ~~~~y~iLgv~~-~a~~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~r 93 (540)
..++|+||||++ +++.++||+|||+|++++|||++ ++.+.|++|++||++|+++..|
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhc
Confidence 358999999999 79999999999999999999996 7788999999999999988765
No 131
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.44 E-value=2.1e-14 Score=124.42 Aligned_cols=100 Identities=12% Similarity=0.052 Sum_probs=83.2
Q ss_pred eEEe--CCCCccccc-cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 138 FNVV--TSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 138 V~~l--t~~~F~~~v-~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
|..+ +.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+ +.+.+..||+++++. ++++++ |
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~---~~~~~~------i 74 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGN---AADAYG------V 74 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHH---HHHHTT------C
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHH---HHHhcC------C
Confidence 4566 567888655 67899999999999999999999999999998 567999999997765 899999 9
Q ss_pred eeeeEEEEeCC----CCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 215 RGLPSLVAFPP----GCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f~~----g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++||+++|.+ |.. ...+.|..+ ++|.+.+.+.
T Consensus 75 ~~~Pt~~~~~~~~~~G~~----~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKT----LDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp CSSSEEEEEEEETTEEEE----EEEEESCCH-HHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcceE----EEeecCCCH-HHHHHHHHHh
Confidence 99999999987 643 456778764 4588888776
No 132
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.44 E-value=1.4e-14 Score=123.49 Aligned_cols=101 Identities=13% Similarity=0.198 Sum_probs=85.3
Q ss_pred eeEEe-CCCCcccccc----CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
.|..+ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.+..||+++++. ++++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~---~~~~~~---- 76 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKA---VAEEWN---- 76 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHH---HHHHHH----
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHH---HHHhCC----
Confidence 46667 5688998884 48999999999999999999999999999886 46899999996655 889988
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++|.+|.. ...+.| .+.+.|.+++.+.
T Consensus 77 --v~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 77 --VEAMPTFIFLKDGKL----VDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp --CSSTTEEEEEETTEE----EEEEEC-CCTTHHHHHHHHH
T ss_pred --CCcccEEEEEeCCEE----EEEEec-CCHHHHHHHHHHh
Confidence 999999999988853 355677 6888999998876
No 133
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=6.6e-14 Score=122.71 Aligned_cols=103 Identities=12% Similarity=0.167 Sum_probs=85.8
Q ss_pred EEeCCCCcccccc----CCCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 139 NVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 139 ~~lt~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
..++..+|++.+. ++++++|.||++||++|+.+.|.| +++++.+.+...+..|||+... ...+|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~---- 83 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGE-GVELRKKYG---- 83 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTT-HHHHHHHTT----
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcc-hHHHHHHcC----
Confidence 4568889988873 689999999999999999999999 7888877766788999998421 123899999
Q ss_pred ceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||+++| ++|.. ...+.|..+.+.|.+|+.+.
T Consensus 84 --v~~~Pt~~~~d~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 84 --VHAYPTLLFINSSGEV----VYRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp --CCSSCEEEEECTTSCE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999999 66753 45688999999999999887
No 134
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.41 E-value=2.5e-14 Score=125.12 Aligned_cols=102 Identities=13% Similarity=0.197 Sum_probs=85.7
Q ss_pred eeEEe-CCCCcccccc----CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcc
Q 009206 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~----~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~ 211 (540)
.|..+ +.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..||+++++. ++++++
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~---~~~~~~---- 86 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKE---VAEKYN---- 86 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGG---GHHHHT----
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHH---HHHHcC----
Confidence 35566 4588988883 58999999999999999999999999999886 46899999997665 889988
Q ss_pred ceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 212 ~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++||+++|++|.. ...+.| .+.+.|.+|+.+.+
T Consensus 87 --v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 87 --VEAMPTFLFIKDGAE----ADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp --CCSSCCCCBCTTTTC----CBCCCT-TCTTTHHHHHHHHT
T ss_pred --CCccceEEEEeCCeE----EEEEeC-CCHHHHHHHHHHHH
Confidence 999999999988864 456678 57889999998874
No 135
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.41 E-value=6.4e-14 Score=118.88 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=49.8
Q ss_pred ccccccccCccCCCCHHHHHHHHHHHHHhcCCCCCC--C--------cHHHHHHHHHHHHHcCChh
Q 009206 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--P--------STADFLKIQYAYELLTDPL 91 (540)
Q Consensus 36 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~--~--------~~~~f~~i~~Ay~~L~d~~ 91 (540)
..|||++||++. ||.++||+|||+|+++||||+++ + +.++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 569999999996 99999999999999999999976 2 2578999999999999985
No 136
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.38 E-value=3.8e-14 Score=136.63 Aligned_cols=101 Identities=16% Similarity=0.263 Sum_probs=83.4
Q ss_pred eeEEe-CCCCcccccc-C--CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 137 AFNVV-TSEDFPSIFH-D--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~-~--~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
.|.+| +.++|.+.+. + +++++|.||+|||++|+.+.|.|+++|..+. .+.|++||++ ++. ++++++
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~---l~~~~~----- 169 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTG---AGDRFS----- 169 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHT---CSTTSC-----
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHH---HHHHCC-----
Confidence 46778 8899999883 3 4899999999999999999999999999884 5689999998 443 778888
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCC-------HHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELS-------VDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~-------~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...|.|..+ .+.|..|+.+.
T Consensus 170 -i~~~PTl~~~~~G~~----v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 170 -SDVLPTLLVYKGGEL----ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp -GGGCSEEEEEETTEE----EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999998854 456677665 48888888765
No 137
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.38 E-value=9.4e-12 Score=122.33 Aligned_cols=171 Identities=15% Similarity=0.095 Sum_probs=123.8
Q ss_pred cCCcccccccchhhhhhhhh-cCCCceEEE-EEeCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCC
Q 009206 255 KLPRIFYYTKESMGKNFLAK-TGPHKVKVI-FFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAP 332 (540)
Q Consensus 255 ~lp~~~~i~~~~~~~~fl~~-~~~~~~~vv-~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~P 332 (540)
.+|++..+++.+.+++|++. .. +.|| +|.+.+......+..+|..+++.+.|+.+. .++++++++++. |
T Consensus 4 ~gP~v~~l~s~~~~~~~~~~~~~---v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~-----~~~v~~~~~v~~-p 74 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEFLKDGDD---VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTF-----STEIAKFLKVSL-G 74 (250)
T ss_dssp -CCSSEECCCHHHHHHHHHHCSS---CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEEC-----CHHHHHHHTCCS-S
T ss_pred CCCCceecCCHHHHHHHHhcCCC---eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEEC-----cHHHHHHcCCCC-C
Confidence 46777777665557888875 43 4455 555544444567788999999999999874 346899999975 9
Q ss_pred EEEEEeC------CCCceeeec--CCCChhHHHHHHHhhccCCCccccccchhhhccCCCCCCCCCCCCceeEEEEEecC
Q 009206 333 AIVFLKD------PGVKPVVYY--GSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR 404 (540)
Q Consensus 333 tlv~fk~------~~~~~~~y~--G~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~~~~ 404 (540)
+|++|++ .++.++.|+ |.++.+.|.+||..+.+|++++++..|..+..- ++ .+|++++..
T Consensus 75 ~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~--------~~----~l~~~~~~~ 142 (250)
T 3ec3_A 75 KLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS--------KR----PLVVVYYSV 142 (250)
T ss_dssp EEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC--------SS----SEEEEEECC
T ss_pred eEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhhc--------cC----ccEEEEEec
Confidence 9999996 356678898 478999999999999999999999999765221 11 377766642
Q ss_pred C-----ChhhHHHHHHHHHHHHhhccccccccccccCCchHHHHhccCCceEEEEEechhhHHHHHhhccC
Q 009206 405 L-----SPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEAQDRYCSFYLFS 470 (540)
Q Consensus 405 ~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~f~wvd~~~q~~f~~~~~~~ 470 (540)
. ..+.+..++.++.+|+ .|+ .+.|+|+|++.....++.|..+
T Consensus 143 d~~~~~~~~~~~~~~~~~~vAk----------------------~~k--ki~F~~~d~~~~~~~l~~fgl~ 189 (250)
T 3ec3_A 143 DFSFDYRTATQFWRNKVLEVAK----------------------DFP--EYTFAIADEEDYATEVKDLGLS 189 (250)
T ss_dssp CCSTTTHHHHHHHHHHHHHHHT----------------------TCT--TSEEEEEETTTTHHHHHHTTCS
T ss_pred ccccccchhHHHHHHHHHHHHH----------------------hhc--ceeEEEEcHHHHHHHHHHcCCC
Confidence 2 2234445566655554 787 5999999999888888877554
No 138
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.37 E-value=1.9e-11 Score=118.31 Aligned_cols=174 Identities=22% Similarity=0.333 Sum_probs=125.4
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEeCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCC
Q 009206 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv-~f~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~ 340 (540)
+++.+.+++|+... .+.|| +|.+.+....+.+..+|..++ .+.|+.+. .++++++|+++. |+|++|++.
T Consensus 14 l~s~~~~~~~l~~~---~v~vVgff~~~~~~~~~~f~~~A~~l~-~~~F~~t~-----~~~v~~~~~v~~-p~i~lfk~~ 83 (227)
T 4f9z_D 14 LTDVPAAMEFIAAT---EVAVIGFFQDLEIPAVPILHSMVQKFP-GVSFGIST-----DSEVLTHYNITG-NTICLFRLV 83 (227)
T ss_dssp CCSHHHHHHHHHTS---SEEEEEECSCSCSTHHHHHHHHTTTCT-TSEEEEEC-----CHHHHHHTTCCS-SEEEEEETT
T ss_pred eCCHHHHHHHHhcC---CeEEEEEecCCCchhHHHHHHHHHhCC-CceEEEEC-----CHHHHHHcCCCC-CeEEEEEec
Confidence 44434467888643 35555 555555556778888999884 78888753 356999999986 999999987
Q ss_pred CCceeeecC----CCChhHHHHHHHhhccCCCccccccchhh---hccCCCCCCCCCCCCceeEEEEEecC-CChhhHHH
Q 009206 341 GVKPVVYYG----SFNNSRLSEVMEQNKLQELPQLRSVTSME---LGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKM 412 (540)
Q Consensus 341 ~~~~~~y~G----~~~~~~l~~fi~~~~~~~lp~l~~~~~~~---~~c~~~~~~~~~k~~~~~lcvi~~~~-~~~~~~~~ 412 (540)
++.+..|.| .++.+.|.+||..+..|++++++..|..+ ..+| ++++++.+ ...+.+++
T Consensus 84 ~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~--------------~~~l~f~~~~~~~~~~~ 149 (227)
T 4f9z_D 84 DNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQ--------------IHLLLIMNKASPEYEEN 149 (227)
T ss_dssp TTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCC--------------EEEEEEECTTSTTHHHH
T ss_pred CcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCc--------------eEEEEEEcCCcchHHHH
Confidence 777888984 78999999999999999999999988543 2332 44454544 34566777
Q ss_pred HHHHHHHHHhhccccccccccccCCchHHHHhccCCceEEEEEech--hhHHHHHhhccCCccccccCCccCCCCCCeEE
Q 009206 413 RETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGE--AQDRYCSFYLFSETSFETCGARRDMSDVPRLF 490 (540)
Q Consensus 413 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~f~wvd~~--~q~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (540)
++.++++|+ .++++ +.|+|+|++ .....++.|-.+. .+.|.+.
T Consensus 150 ~~~~~~vAk----------------------~~k~~-i~F~~vd~~~~~~~~~l~~fgl~~------------~~~P~~~ 194 (227)
T 4f9z_D 150 MHRYQKAAK----------------------LFQGK-ILFILVDSGMKENGKVISFFKLKE------------SQLPALA 194 (227)
T ss_dssp HHHHHHHHH----------------------HTTTT-CEEEEEETTSGGGHHHHHHTTCCG------------GGCSEEE
T ss_pred HHHHHHHHH----------------------HhhCC-EEEEEeCCccHhHHHHHHHcCCCc------------ccCCEEE
Confidence 777777776 66665 899999995 4567777775432 1458888
Q ss_pred EEEe
Q 009206 491 IVRY 494 (540)
Q Consensus 491 ~v~~ 494 (540)
++..
T Consensus 195 i~~~ 198 (227)
T 4f9z_D 195 IYQT 198 (227)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7763
No 139
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.37 E-value=5.8e-13 Score=107.36 Aligned_cols=82 Identities=13% Similarity=0.097 Sum_probs=71.7
Q ss_pred CcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCc
Q 009206 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (540)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~ 233 (540)
.+.+|.||++||++|+++.|.++++++.+.+...+..||+++++. ++++++ |.++||+++ +|. .
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~~~Pt~~~--~G~-----~ 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQ---KAMEYG------IMAVPTIVI--NGD-----V 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCC---TTTSTT------TCCSSEEEE--TTE-----E
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHH---HHHHCC------CcccCEEEE--CCE-----E
Confidence 467999999999999999999999999998777999999997765 778888 999999998 653 2
Q ss_pred ccccCCCCHHHHHHHHHHh
Q 009206 234 TRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 234 ~~y~G~~~~~~i~~fi~~~ 252 (540)
.+.|..+.+.|.+|+.+.
T Consensus 67 -~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 67 -EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp -ECCSSSSSHHHHHHHHHH
T ss_pred -eeecCCCHHHHHHHHHHh
Confidence 678999999999998765
No 140
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.36 E-value=2.1e-13 Score=120.75 Aligned_cols=100 Identities=16% Similarity=0.272 Sum_probs=82.2
Q ss_pred CCCCcccccc--CCCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeeccch-hhhhHHHHhCCCCccceee
Q 009206 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI-RLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 142 t~~~F~~~v~--~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~-~~~~~l~~~~~~~~~~~V~ 215 (540)
+.++|+..+. .+++++|.||++||++|+++.|.+ .++++.+.+ +.+..||++++ .....++++++ |.
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~------v~ 90 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN------VL 90 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT------CC
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC------CC
Confidence 4466776663 489999999999999999999999 999998876 78999999532 23345899999 99
Q ss_pred eeeEEEEe-CCCCCCCCCc--ccccCCCCHHHHHHHHHHh
Q 009206 216 GLPSLVAF-PPGCKSSDCM--TRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ~~Ptl~~f-~~g~~~~~~~--~~y~G~~~~~~i~~fi~~~ 252 (540)
++||+++| ++|.. . ..+.|..+.+.|.+++.+.
T Consensus 91 ~~Pt~~~~d~~G~~----v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 91 GLPTILFFDGQGQE----HPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSSEEEEECTTSCB----CGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCE----eeeeeeeeccCHHHHHHHHHhc
Confidence 99999999 77753 2 4689999999999998775
No 141
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.36 E-value=8.7e-13 Score=106.30 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=71.4
Q ss_pred cEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcc
Q 009206 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (540)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~ 234 (540)
+.+|.||++||++|+++.|.++++++.+.+...+..||+++++. ++++++ |.++||+++ +|. .
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~---~~~~~~------v~~~Pt~~~--~G~-----~- 65 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDRE---KAIEYG------LMAVPAIAI--NGV-----V- 65 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGG---GGGGTC------SSCSSEEEE--TTT-----E-
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHH---HHHhCC------ceeeCEEEE--CCE-----E-
Confidence 46899999999999999999999999998778999999997765 888888 999999998 663 2
Q ss_pred cccCCCCHHHHHHHHHHh
Q 009206 235 RFEGELSVDAVTDWFATA 252 (540)
Q Consensus 235 ~y~G~~~~~~i~~fi~~~ 252 (540)
.+.|..+.+.|.+|+.+.
T Consensus 66 ~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 66 RFVGAPSREELFEAINDE 83 (85)
T ss_dssp EEECSSCCHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHHHH
Confidence 678998999999999875
No 142
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.35 E-value=3.8e-13 Score=119.21 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=89.0
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee-
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG- 216 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~- 216 (540)
|.++|.+||+..+.+..+++|.|||+ |+.|+.++|.++++|++++|.+.|++||.++++. +++++| |++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~---~a~~~g------i~~~ 77 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGA---HAGNLN------LKTD 77 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGG---GTTTTT------CCSS
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHH---HHHHcC------CCcc
Confidence 67899999998888889999999999 8999999999999999999999999999997765 888988 888
Q ss_pred -eeEEEEeCC--CCCCCCCccccc--CCCCHHHHHHHHHHhh
Q 009206 217 -LPSLVAFPP--GCKSSDCMTRFE--GELSVDAVTDWFATAI 253 (540)
Q Consensus 217 -~Ptl~~f~~--g~~~~~~~~~y~--G~~~~~~i~~fi~~~v 253 (540)
+||+++|.. |.. ..+. |..+.+.|.+|+.+.+
T Consensus 78 ~iPtl~i~~~~~g~~-----~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 78 KFPAFAIQEVAKNQK-----FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SSSEEEEECTTTCCB-----CCCCSSSCCCHHHHHHHHHHHH
T ss_pred cCCEEEEEecCcCcc-----cCCCCccccCHHHHHHHHHHHH
Confidence 999999997 432 2333 9999999999998864
No 143
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.35 E-value=1.5e-13 Score=134.51 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=82.2
Q ss_pred eeEEe-CCCCcccccc---CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccc
Q 009206 137 AFNVV-TSEDFPSIFH---DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (540)
Q Consensus 137 ~V~~l-t~~~F~~~v~---~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (540)
.|..| +.++|...|. .+++++|.||||||++|+.+.|.|.++|..+.+ +.|++||+++ ..++++|+
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~----- 182 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFS----- 182 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSC-----
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCC-----
Confidence 46788 6899999883 478999999999999999999999999999865 7899999985 23777887
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccC-------CCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G-------~~~~~~i~~fi~~~ 252 (540)
|.++||+++|++|.. ...+.| .++.+.|..|+.+.
T Consensus 183 -I~~~PTll~~~~G~~----v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 183 -SDVLPTLLVYKGGEL----LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp -TTTCSEEEEEETTEE----EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccccccccHHHHHHHHHHc
Confidence 999999999998853 223333 25678888888775
No 144
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.35 E-value=6.9e-13 Score=116.79 Aligned_cols=89 Identities=18% Similarity=0.263 Sum_probs=75.9
Q ss_pred cCCCcEEEEEEecCCCCccCChHHHH--HHHHHHhcccceeeeec---cchhhhhHHHHhCCCCcccee---eeeeEEEE
Q 009206 151 HDSKPWLIQVYSDGSYLCGQFSGAWK--TIAALLEGIANTGMVEL---GDIRLATHLAERKPIGQIFFR---RGLPSLVA 222 (540)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~--~~A~~l~~~~~v~~Vdc---~~~~~~~~l~~~~~~~~~~~V---~~~Ptl~~ 222 (540)
.++++++|.||++||++|+.+.|.|+ +++..+.+.+.+..||+ ++++ .++++++ | .++||+++
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~---~l~~~~~------v~~~~~~Pt~~~ 97 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNL---ELSQAYG------DPIQDGIPAVVV 97 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSH---HHHHHTT------CGGGGCSSEEEE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchH---HHHHHhC------CccCCccceEEE
Confidence 46899999999999999999999999 99999977789999999 6444 4899999 8 99999999
Q ss_pred e-CCCCCCCCCcccccC-------CCCHHHHHHHHHHh
Q 009206 223 F-PPGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (540)
Q Consensus 223 f-~~g~~~~~~~~~y~G-------~~~~~~i~~fi~~~ 252 (540)
| ++|.. ...+.| ..+.+.|.+|+.+.
T Consensus 98 ~d~~G~~----~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 98 VNSDGKV----RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp ECTTSCE----EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred ECCCCCE----EEEecCCcccccccCCHHHHHHHHHHh
Confidence 9 77754 455566 67899999998764
No 145
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.35 E-value=3.9e-13 Score=129.87 Aligned_cols=99 Identities=12% Similarity=0.118 Sum_probs=84.5
Q ss_pred eEEeCCCCccccccCCCcE-EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~-lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
+..|+.++|+.++..++++ +|.||+|||++|+++.|.|++++..+ +.+.++.|||++++. +|++++ |.+
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~~~~~---l~~~~~------v~~ 189 (229)
T 2ywm_A 120 KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDASENQD---LAEQFQ------VVG 189 (229)
T ss_dssp CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGGGCHH---HHHHTT------CCS
T ss_pred ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECCCCHH---HHHHcC------Ccc
Confidence 4668888898887665555 88999999999999999999999988 456899999997665 899999 999
Q ss_pred eeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+||+++ +|. ...|.|.++.+.|.+|+.+.+
T Consensus 190 ~Pt~~~--~G~-----~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 190 VPKIVI--NKG-----VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp SSEEEE--GGG-----TEEEESCCCHHHHHHHHHHHH
T ss_pred cCEEEE--CCE-----EEEeeCCCCHHHHHHHHHHHh
Confidence 999998 663 356899999999999998773
No 146
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.34 E-value=1.3e-13 Score=117.54 Aligned_cols=77 Identities=10% Similarity=0.002 Sum_probs=61.8
Q ss_pred CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch-h--hhhHHHHhCCCCccceeeeeeEEEEeCCCCCC
Q 009206 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-R--LATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~-~--~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~ 229 (540)
+++.+|.||||||++|+++.|.|+++++.+. .|||+.+ . ....+|++++ |+++||+++ +|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~------V~~~PT~~i--~G--- 74 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAG------ITSYPTWII--NG--- 74 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTT------CCSSSEEEE--TT---
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcC------CeEeCEEEE--CC---
Confidence 4567899999999999999999999986553 6777721 0 1234899999 999999877 55
Q ss_pred CCCcccccCCCCHHHHHHHHH
Q 009206 230 SDCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 230 ~~~~~~y~G~~~~~~i~~fi~ 250 (540)
..|.|.++.+.|.+|+.
T Consensus 75 ----~~~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 75 ----RTYTGVRSLEALAVASG 91 (106)
T ss_dssp ----EEEESCCCHHHHHHHHT
T ss_pred ----EEecCCCCHHHHHHHhC
Confidence 34899999999999974
No 147
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.33 E-value=3.2e-13 Score=117.84 Aligned_cols=100 Identities=13% Similarity=0.070 Sum_probs=81.9
Q ss_pred eeEEeCCCCcccccc--CCCcEEEEEEec-------CCCCccCChHHHHHHHHHHhcccceeeeec-------cchhhhh
Q 009206 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSD-------GSYLCGQFSGAWKTIAALLEGIANTGMVEL-------GDIRLAT 200 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~--~~~~~lV~FYap-------wC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc-------~~~~~~~ 200 (540)
.|...+.++|++.+. ++++++|.|||+ ||++|+.+.|.++++++.+.+.+.+..||+ +.++.
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~-- 83 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNND-- 83 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCH--
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHH--
Confidence 466778899998884 489999999999 999999999999999998877679999999 54443
Q ss_pred HHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 009206 201 HLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 201 ~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~ 250 (540)
++++++ |.++||+++|.++.. ...+.| .+.+.|.+|+.
T Consensus 84 -~~~~~~------i~~~Pt~~~~~~~~~----~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 84 -FRKNLK------VTAVPTLLKYGTPQK----LVESEC-LQANLVEMLFS 121 (123)
T ss_dssp -HHHHHC------CCSSSEEEETTSSCE----EEGGGG-GCHHHHHHHHH
T ss_pred -HHHHCC------CCeeCEEEEEcCCce----Eecccc-CCHHHHHHHHh
Confidence 888888 999999999998643 233334 56788888875
No 148
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.28 E-value=4e-12 Score=124.50 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=73.8
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHh----cccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~----~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~ 227 (540)
.++++++.||||||+||+++.|.|+++|..+. +.+.+++|||++++. ++++++ |.++||+++ +|.
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~---~~~~~~------V~~vPt~~i--~G~ 205 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPD---IADKYG------VMSVPSIAI--NGY 205 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHH---HHHHTT------CCSSSEEEE--TTE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHH---HHHHcC------CeeeCeEEE--CCE
Confidence 46688999999999999999999999999984 446899999997765 889998 999999988 663
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 228 KSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 228 ~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
..|.|.++.++|++|+.+.+
T Consensus 206 ------~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 206 ------LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp ------EEEESCCCHHHHHHHHHHHH
T ss_pred ------EEEeCCCCHHHHHHHHHHHh
Confidence 34899999999999998873
No 149
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.28 E-value=4.1e-11 Score=124.45 Aligned_cols=207 Identities=11% Similarity=0.109 Sum_probs=146.4
Q ss_pred eeEEeCC-CCcccccc-CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 137 AFNVVTS-EDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 137 ~V~~lt~-~~F~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
.|..++. +++++++. ++++++|-||++||+ ...+.|.++|..+.+...||.++.. . ++++++ |
T Consensus 126 ~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~~---~---~~~~~~------v 190 (367)
T 3us3_A 126 PVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATFDS---K---VAKKLT------L 190 (367)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEECCH---H---HHHHHT------C
T ss_pred CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEECCH---H---HHHHcC------C
Confidence 3667754 77888887 789999999999865 5678999999999988899998764 3 788888 7
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCC-CCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEeCCCC---
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE--- 290 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~-~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~~~--- 290 (540)
++ |+|++|+++.. .+..|.|. ++.++|.+|+... .+|.+..++.++. .+..... .....+++|.+...
T Consensus 191 ~~-p~i~lf~~~~~---~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~~-~~~~~~~-~~~~~~~~f~~~~~~~~ 262 (367)
T 3us3_A 191 KL-NEIDFYEAFME---EPVTIPDKPNSEEEIVNFVEEH--RRSTLRKLKPESM-YETWEDD-MDGIHIVAFAEEADPDG 262 (367)
T ss_dssp CT-TCEEEECTTCS---SCEECSSSSCCHHHHHHHHHHT--CSCSEEECCGGGH-HHHHHSC-BTTEEEEEECCTTSHHH
T ss_pred CC-CeEEEEcCCCC---CCeecCCCCCCHHHHHHHHHHc--CccceeecChhhH-HHHHhhc-cCCcEEEEEEcCCChhH
Confidence 75 99999998532 25789995 9999999999998 5777766776553 2333221 12244555644221
Q ss_pred -CCcHHHHHHHHhhcc--CceEEEEEeecccc--HHHHHHcCCC-CCCEEEEEeCCCCceee--ec---CCCChhHHHHH
Q 009206 291 -RASPFVRQISRNYWA--YASFAFVLWREEES--SIWWNTFEVE-SAPAIVFLKDPGVKPVV--YY---GSFNNSRLSEV 359 (540)
Q Consensus 291 -~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~--~~l~~~f~V~-~~Ptlv~fk~~~~~~~~--y~---G~~~~~~l~~f 359 (540)
.....++.+|..|++ .+.|+.+....... +.+.+.||+. ..|+++++......... +. +.++.+.|.+|
T Consensus 263 ~~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F 342 (367)
T 3us3_A 263 YEFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDW 342 (367)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHH
Confidence 122345779999987 58888876543221 1235679998 69999999854432222 34 36899999999
Q ss_pred HHhhccC
Q 009206 360 MEQNKLQ 366 (540)
Q Consensus 360 i~~~~~~ 366 (540)
++...-.
T Consensus 343 ~~~~~~G 349 (367)
T 3us3_A 343 LEDVLEG 349 (367)
T ss_dssp HHHHHHT
T ss_pred HHHHHcC
Confidence 9885444
No 150
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.94 E-value=3.4e-13 Score=118.25 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=78.5
Q ss_pred CccccccCCCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEE
Q 009206 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (540)
Q Consensus 145 ~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~ 221 (540)
.+.....+++++||.||++||++|+.+.|.+ +++++.+.+...+..||++.+. ...++++++ |.++||++
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~~~~~------v~~~Pt~~ 83 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPE-GQELARRYR------VPGTPTFV 83 (130)
Confidence 3444446789999999999999999999999 9999988877789999996332 223888888 99999999
Q ss_pred Ee--CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 222 AF--PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 222 ~f--~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+| .+|.. .....+.|..+.+.|.+++.+.+
T Consensus 84 ~~d~~~G~~--~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 84 FLVPKAGAW--EEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 99 45531 00346789999999999987763
No 151
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.26 E-value=5.7e-11 Score=122.39 Aligned_cols=203 Identities=9% Similarity=0.115 Sum_probs=144.5
Q ss_pred eeEEeC-CCCcccccc-CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 137 AFNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 137 ~V~~lt-~~~F~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
.+..|+ .+++++++. +++.++|.||++||. ...+.|.++|..+.+...+|.++.. . +|++++ |
T Consensus 124 ~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~~~~f~~~~~~---~---~~~~~~------v 188 (350)
T 1sji_A 124 PVEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQPYIKFFATFDK---G---VAKKLS------L 188 (350)
T ss_dssp SEEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTTTSEEEEECCH---H---HHHHHT------C
T ss_pred cceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhccCcEEEEECCH---H---HHHHcC------C
Confidence 356775 467888887 788999999999864 4579999999999888889988644 3 889988 8
Q ss_pred eeeeEEEEeCCCCCCCCCcccccCC-CCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEeCCCC---
Q 009206 215 RGLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE--- 290 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~~~~~~~y~G~-~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~~~--- 290 (540)
. +|+|++|+++.. .+..|.|. ++.++|.+|+... ..|.+..++.++ ...+... +.....+++|.+...
T Consensus 189 ~-~p~i~~~~~~~~---~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~-~~~~~~~l~f~~~~~~~~ 260 (350)
T 1sji_A 189 K-MNEVDFYEPFMD---EPIAIPDKPYTEEELVEFVKEH--QRPTLRRLRPED-MFETWED-DLNGIHIVAFAERSDPDG 260 (350)
T ss_dssp C-TTCEEEECTTCS---SCEECSSSSCCHHHHHHHHHHH--CCCSEEECCTTT-HHHHHHS-CSSSEEEEEECCTTSHHH
T ss_pred C-CCcEEEEeCCCC---CceecCCCCCCHHHHHHHHHHc--CccchhhcChhh-HHHHhcC-CCCCcEEEEEEcCCCccH
Confidence 8 999999997532 25789997 9999999999987 577776677665 3444432 111334555653221
Q ss_pred -CCcHHHHHHHHhhcc--CceEEEEEeeccccHHHH----HHcCCC-CCCEEEEEeCCCCceee--e---cCCCChhHHH
Q 009206 291 -RASPFVRQISRNYWA--YASFAFVLWREEESSIWW----NTFEVE-SAPAIVFLKDPGVKPVV--Y---YGSFNNSRLS 357 (540)
Q Consensus 291 -~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~~~l~----~~f~V~-~~Ptlv~fk~~~~~~~~--y---~G~~~~~~l~ 357 (540)
.....++.+|.++++ .+.|+.+.... ...++ +.||+. .+|+++++......... + .|.++.+.|.
T Consensus 261 ~~~~~~~~~vA~~~~~~~~~~f~~id~~~--~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 338 (350)
T 1sji_A 261 YEFLEILKQVARDNTDNPDLSIVWIDPDD--FPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELE 338 (350)
T ss_dssp HHHHHHHHHHHHHGGGCSSCCEEEECGGG--CHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCceEEEEECchh--hHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHH
Confidence 123456678999976 67788776332 24456 889998 47999999753322222 2 2478999999
Q ss_pred HHHHhhc
Q 009206 358 EVMEQNK 364 (540)
Q Consensus 358 ~fi~~~~ 364 (540)
+|++...
T Consensus 339 ~F~~d~~ 345 (350)
T 1sji_A 339 DWIEDVL 345 (350)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998754
No 152
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.24 E-value=3.3e-12 Score=117.78 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=80.4
Q ss_pred EEeCCCCccccc----cCCCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeeccchhhhh-----------
Q 009206 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLAT----------- 200 (540)
Q Consensus 139 ~~lt~~~F~~~v----~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~~~~~----------- 200 (540)
..++..+|++.+ .+++++||.|||+||++|+++.+.. .++.+.+++.+.+..||++++....
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 456677888777 4789999999999999999986555 6666666666789999998654310
Q ss_pred -----------HH-HHhCCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCC-HHHHHHHHHHh
Q 009206 201 -----------HL-AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELS-VDAVTDWFATA 252 (540)
Q Consensus 201 -----------~l-~~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~-~~~i~~fi~~~ 252 (540)
.+ +++++ |.++||+++| ++|.. ...+.|..+ .+.+.+|+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~------v~~~Pt~~lid~~G~~----~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFG------ANAQPFYVLIDNEGNP----LNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHS------CCCSSEEEEECTTSCB----SSCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcC------CCCcceEEEECCCCCE----EeeccCCCCCHHHHHHHHHHH
Confidence 00 56666 9999999999 67754 456679998 99999999876
No 153
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.23 E-value=1.7e-10 Score=113.33 Aligned_cols=212 Identities=14% Similarity=0.205 Sum_probs=145.4
Q ss_pred eeEEeCC-CCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceee
Q 009206 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (540)
Q Consensus 137 ~V~~lt~-~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~ 215 (540)
.|..|++ ++++.++.++++++|-|+++| |....+.|.++|..+.+...++.+.-. . ++++++ +.
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~~~---~---v~~~~~------~~ 71 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTNVE---S---LVNEYD------DN 71 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEECCH---H---HHHHHC------SS
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEChH---H---HHHHhC------CC
Confidence 4677854 556777788899999999998 556778999999999888889888532 3 778888 87
Q ss_pred eeeEEEEeCCCCCC---CCCcccc-cCCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEeCCCCC
Q 009206 216 GLPSLVAFPPGCKS---SDCMTRF-EGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER 291 (540)
Q Consensus 216 ~~Ptl~~f~~g~~~---~~~~~~y-~G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~~~~ 291 (540)
+ |+|++|+++... ......| .|.++.++|.+|+... .+|.+..++.++ ...+. +. .++++++....+.
T Consensus 72 ~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~--~~Plv~e~t~~n-~~~~~-~~---~~~v~~~~~~~~~ 143 (252)
T 2h8l_A 72 G-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDN-KDLIQ-GK---DLLIAYYDVDYEK 143 (252)
T ss_dssp S-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH--SSCSSCEECTTT-HHHHS-SS---SEEEEEECCBTTT
T ss_pred C-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhc--ccCCeeeccccc-Hhhhc-CC---CeEEEEeecchhh
Confidence 7 999999974200 0124679 9999999999999998 578777777666 34442 22 2444444322111
Q ss_pred C-------cHHHHHHHHhhccC---ceEEEEEeeccccHHHHHHcCC--C--CCCEEEEEeCCCCceeeecCCCChhH--
Q 009206 292 A-------SPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEV--E--SAPAIVFLKDPGVKPVVYYGSFNNSR-- 355 (540)
Q Consensus 292 ~-------~~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V--~--~~Ptlv~fk~~~~~~~~y~G~~~~~~-- 355 (540)
. ...++.+|..|++. +.|+.+... ....+.+.||+ . ..|+|+++...+.+ ..+.+.++.+.
T Consensus 144 ~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~~k-y~~~~~~t~~~~~ 220 (252)
T 2h8l_A 144 NAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKGEK-FVMQEEFSRDGKA 220 (252)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTSCE-EECCSCCCTTSHH
T ss_pred cchhHHHHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcCcE-ecCCcccCcchHH
Confidence 1 12345588999876 778887643 23568899999 3 48999998643332 23567888888
Q ss_pred HHHHHHhhccCCC-cccccc
Q 009206 356 LSEVMEQNKLQEL-PQLRSV 374 (540)
Q Consensus 356 l~~fi~~~~~~~l-p~l~~~ 374 (540)
|.+|++...-..+ |.+-++
T Consensus 221 i~~F~~~~~~Gkl~~~~kSe 240 (252)
T 2h8l_A 221 LERFLQDYFDGNLKRYLKSE 240 (252)
T ss_dssp HHHHHHHHHHTCSCCCC---
T ss_pred HHHHHHHHHCCCccccccCC
Confidence 9999988654433 333333
No 154
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.21 E-value=2.4e-12 Score=110.99 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=67.1
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-----cceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-----ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-----~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
+...+||+|||+||++|+.+.|.. +..+... ..+.+||.+++.. ..++.+++ |.+.|||++|.+|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~~~-~~la~~~~------V~g~PT~i~f~~G 86 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDPLP-PGLELARP------VTFTPTFVLMAGD 86 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSCCC-TTCBCSSC------CCSSSEEEEEETT
T ss_pred cCCCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCCCc-hhHHHHCC------CCCCCEEEEEECC
Confidence 457899999999999999986532 2222222 4788999987632 22667777 9999999999988
Q ss_pred CCCCCCcccccCCCCHHHHHHHHHHhhh
Q 009206 227 CKSSDCMTRFEGELSVDAVTDWFATAIL 254 (540)
Q Consensus 227 ~~~~~~~~~y~G~~~~~~i~~fi~~~v~ 254 (540)
+. ..+..|....+.+..|+.+.+.
T Consensus 87 ~e----v~Ri~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 87 VE----SGRLEGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp EE----EEEEECCCCHHHHHHHHHHHHH
T ss_pred EE----EeeecCCCCHHHHHHHHHHHHh
Confidence 64 5678999999999999987643
No 155
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.17 E-value=4.3e-12 Score=116.58 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=75.9
Q ss_pred ccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEe-C
Q 009206 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF-P 224 (540)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f-~ 224 (540)
|.....+++++||.|||+||++|+.+.|.|+++++.......|..||+++++.. ++..++++ +.++||+++| +
T Consensus 39 ~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~--~~~~~~~~----~~~~Pt~~~~d~ 112 (164)
T 1sen_A 39 KKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEP--KDEDFSPD----GGYIPRILFLDP 112 (164)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSC--SCGGGCTT----CSCSSEEEEECT
T ss_pred HHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchH--HHHHhccc----CCcCCeEEEECC
Confidence 443445789999999999999999999999998876655568999999965431 45666632 4779999999 6
Q ss_pred CCCCCCCCcccccC----------CCCHHHHHHHHHHhhh
Q 009206 225 PGCKSSDCMTRFEG----------ELSVDAVTDWFATAIL 254 (540)
Q Consensus 225 ~g~~~~~~~~~y~G----------~~~~~~i~~fi~~~v~ 254 (540)
+|.. ...+.| ..+.+.|++++.+.+.
T Consensus 113 ~G~~----~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 113 SGKV----HPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp TSCB----CTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCCE----EEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 7754 344556 3789999999988643
No 156
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.16 E-value=5.8e-12 Score=107.36 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=79.9
Q ss_pred eEEeC-CCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhh-hHHHHhCCCCccceee
Q 009206 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRR 215 (540)
Q Consensus 138 V~~lt-~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~-~~l~~~~~~~~~~~V~ 215 (540)
...|+ .++|++++.++++++|.|+|.|||.|+.+.|.+++++.. +.+.+..||.++++.. ..++++++ |+
T Consensus 8 ~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~------V~ 79 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTN------VK 79 (112)
T ss_dssp EEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHT------CC
T ss_pred eeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhC------Cc
Confidence 35564 466998888899999999999999999999999999984 5678999999977653 34789999 99
Q ss_pred e-eeEEEEeCCCCCCCCCcccccCCCCHHHHHHH
Q 009206 216 G-LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDW 248 (540)
Q Consensus 216 ~-~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~f 248 (540)
+ .||+++|++|.. ....-.|..+.++|.+.
T Consensus 80 h~sPq~il~k~G~~---v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 80 HESPQAFYFVNGEM---VWNRDHGDINVSSLAQA 110 (112)
T ss_dssp CCSSEEEEEETTEE---EEEEEGGGCSHHHHHHH
T ss_pred cCCCeEEEEECCEE---EEEeeccccCHHHHHHh
Confidence 5 999999999964 12223477788777654
No 157
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.15 E-value=2.3e-11 Score=96.17 Aligned_cols=74 Identities=18% Similarity=0.179 Sum_probs=61.0
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCccc
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~ 235 (540)
..|.||++||++|+.+.|.++++++.+.+...+..|| ++ .++++++ |+++||+++ +|.. .
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~---~~~~~~~------v~~~Pt~~~--~G~~-----~- 61 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EM---DQILEAG------LTALPGLAV--DGEL-----K- 61 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SH---HHHHHHT------CSSSSCEEE--TTEE-----E-
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CH---HHHHHCC------CCcCCEEEE--CCEE-----E-
Confidence 3589999999999999999999999998767888888 23 3888888 999999988 6642 2
Q ss_pred ccCCC-CHHHHHHHH
Q 009206 236 FEGEL-SVDAVTDWF 249 (540)
Q Consensus 236 y~G~~-~~~~i~~fi 249 (540)
+.|.. +.+.|.+|+
T Consensus 62 ~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 62 IMGRVASKEEIKKIL 76 (77)
T ss_dssp ECSSCCCHHHHHHHC
T ss_pred EcCCCCCHHHHHHHh
Confidence 33887 899998875
No 158
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.13 E-value=6.4e-11 Score=107.42 Aligned_cols=98 Identities=18% Similarity=0.200 Sum_probs=77.8
Q ss_pred CCccccc----cCCCcEEEEEE-ecCCCCccCChHHH---HHHHHHHhcccceeeeeccchh--------hhhHHHHhCC
Q 009206 144 EDFPSIF----HDSKPWLIQVY-SDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIR--------LATHLAERKP 207 (540)
Q Consensus 144 ~~F~~~v----~~~~~~lV~FY-apwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~~--------~~~~l~~~~~ 207 (540)
.++.+.+ ..+++++|.|| |+||++|+++.|.+ .++++.+...+.+..||+++.. ....++++++
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~ 113 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK 113 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC
Confidence 4455555 35889999999 99999999999999 7887766555688899998542 2235889998
Q ss_pred CCccceeeeeeEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 009206 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (540)
Q Consensus 208 ~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~--~~~~i~~fi~~~ 252 (540)
|.++||+++| ++|.. ...+ |.. +.+.+.+++.+.
T Consensus 114 ------v~~~Pt~~~~d~~G~~----~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 114 ------VTGFPELVFIDAEGKQ----LARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp ------CCSSSEEEEECTTCCE----EEEE-CCCTTCHHHHHHHHHHH
T ss_pred ------CCCCCEEEEEcCCCCE----EEEe-cCCCCCHHHHHHHHHHH
Confidence 9999999999 67754 4566 888 999999998876
No 159
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.11 E-value=1.3e-10 Score=101.71 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=73.8
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhh-------------------hhHHHHhCCCCccc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-------------------ATHLAERKPIGQIF 212 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~-------------------~~~l~~~~~~~~~~ 212 (540)
.+++++|.||++||++|+.+.|.++++++.+. .+.+..|+++++.. ...++++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----- 96 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYN----- 96 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTT-----
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcC-----
Confidence 57899999999999999999999999999987 56899999886210 234778888
Q ss_pred eeeeeeEEEEe-CCCCCCCCCccccc---CCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAF-PPGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f-~~g~~~~~~~~~y~---G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. . .+. |..+.+.|.+++.+.
T Consensus 97 -i~~~P~~~lid~~G~i----~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 97 -VPWQPAFVFYRADGTS----T-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp -CCSSSEEEEECTTSCE----E-EECCSSSCCCHHHHHHHHHHC
T ss_pred -CCCCCEEEEECCCCcE----E-EEEcCCCccCHHHHHHHHHHH
Confidence 9999999999 55643 3 678 999999999998765
No 160
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.09 E-value=1.4e-10 Score=102.73 Aligned_cols=104 Identities=14% Similarity=0.119 Sum_probs=81.0
Q ss_pred EeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch-----------------------
Q 009206 140 VVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----------------------- 196 (540)
Q Consensus 140 ~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~----------------------- 196 (540)
.++.+.+....-.+++++|.||++||++|+.+.|.++++++.+.+.+.+..|+++..
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 455555543334678999999999999999999999999999987688888987531
Q ss_pred -hhhhHHHHhCCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 197 -RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 197 -~~~~~l~~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.....+++.++ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 96 ~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 96 VDSDHALTDAFE------NEYVPAYYVFDKTGQL----RHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp ECSSCHHHHHTC------CCCSSEEEEECTTCBE----EEEEESCSTTHHHHHHHHHHH
T ss_pred ECCchhHHHHhC------CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHHH
Confidence 11224788888 9999999999 66643 456789899999999988763
No 161
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.08 E-value=1.8e-10 Score=100.36 Aligned_cols=101 Identities=15% Similarity=0.016 Sum_probs=77.8
Q ss_pred EeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh--------------------hh
Q 009206 140 VVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LA 199 (540)
Q Consensus 140 ~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~--------------------~~ 199 (540)
.++.+.+...--.+++++|.||++||++|+.+.|.++++++.+. .+.+..|++++.. ..
T Consensus 12 ~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 90 (136)
T 1zzo_A 12 TLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTD 90 (136)
T ss_dssp BTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTT
T ss_pred cCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCC
Confidence 33444443322357899999999999999999999999999987 5688999986421 12
Q ss_pred hHHHHhCCCCccceeeeeeEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 200 THLAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 200 ~~l~~~~~~~~~~~V~~~Ptl~~f~-~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
..+++.++ |.++|+++++. +|.. . .|.|..+.+.|.+++.+.
T Consensus 91 ~~~~~~~~------i~~~P~~~~id~~g~i----~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 91 GSVWANFG------VTQQPAYAFVDPHGNV----D-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp CHHHHHTT------CCSSSEEEEECTTCCE----E-EEESCCCHHHHHHHHHHH
T ss_pred cHHHHHcC------CCCCceEEEECCCCCE----E-EEecCCCHHHHHHHHHHH
Confidence 34677777 99999999995 5542 3 788999999999999876
No 162
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.04 E-value=4.4e-09 Score=103.16 Aligned_cols=203 Identities=13% Similarity=0.084 Sum_probs=139.0
Q ss_pred eeEEeCC-CCccccccC-CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCcccee
Q 009206 137 AFNVVTS-EDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (540)
Q Consensus 137 ~V~~lt~-~~F~~~v~~-~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V 214 (540)
.|..|++ +++++++++ +++|+|-|++++ |....+.|.++|+.|.+...+|.+.-. . ++++++ +
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~---~~~~~~~F~~~A~~lr~~~~F~~t~~~---~---v~~~~~------v 71 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGV---GDPGYLQYQDAANTLREDYKFHHTFST---E---IAKFLK------V 71 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCT---TCHHHHHHHHHHHHHTTTCCEEEECCH---H---HHHHHT------C
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCC---CchHHHHHHHHHHhhhcCcEEEEECcH---H---HHHHcC------C
Confidence 3567765 778888877 899999999997 457889999999999888899887533 3 677777 7
Q ss_pred eeeeEEEEeCCCCCC---CCCccccc--CCCCHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEe--C
Q 009206 215 RGLPSLVAFPPGCKS---SDCMTRFE--GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFS--K 287 (540)
Q Consensus 215 ~~~Ptl~~f~~g~~~---~~~~~~y~--G~~~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~--~ 287 (540)
++ |+|++|+++... ......|. |.++.++|.+|+... .+|.+..++.++. .....+ ++.+++|. +
T Consensus 72 ~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~--~~Plv~e~t~~n~-~~~~~~----~~l~~~~~~~d 143 (250)
T 3ec3_A 72 SL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH--ALPLVGHRKTSND-AKRYSK----RPLVVVYYSVD 143 (250)
T ss_dssp CS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH--SSCTEEEECTTTH-HHHSCS----SSEEEEEECCC
T ss_pred CC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc--CCCceeecCccch-hhhhcc----CccEEEEEecc
Confidence 77 999999964100 01246788 589999999999998 6787777776553 332222 24444443 2
Q ss_pred CCCC-------CcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCC--C-CEEEEEeCCCCceeeec-CCCChhHH
Q 009206 288 TGER-------ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A-PAIVFLKDPGVKPVVYY-GSFNNSRL 356 (540)
Q Consensus 288 ~~~~-------~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~--~-Ptlv~fk~~~~~~~~y~-G~~~~~~l 356 (540)
..+. ....++.+|..|+ .+.|+.+...+ .....+.||+.. . |.++++...+.+ ..+. +.++.+.|
T Consensus 144 ~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~--~~~~l~~fgl~~~~~~p~~~~~~~~~~k-y~~~~~~~t~~~i 219 (250)
T 3ec3_A 144 FSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEED--YATEVKDLGLSESGGDVNAAILDESGKK-FAMEPEEFDSDAL 219 (250)
T ss_dssp CSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTT--THHHHHHTTCSSCSCSCEEEEECTTSCE-EECCCCSCCHHHH
T ss_pred cccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHH--HHHHHHHcCCCccCCCcEEEEEcCCCce-ecCCcccCCHHHH
Confidence 1111 1233466888998 78888875322 345678999974 3 477776533322 2234 67899999
Q ss_pred HHHHHhhccC
Q 009206 357 SEVMEQNKLQ 366 (540)
Q Consensus 357 ~~fi~~~~~~ 366 (540)
.+|++...-.
T Consensus 220 ~~Fv~~~~~G 229 (250)
T 3ec3_A 220 REFVMAFKKG 229 (250)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHCC
Confidence 9999875443
No 163
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.04 E-value=1.5e-10 Score=105.08 Aligned_cols=102 Identities=16% Similarity=0.083 Sum_probs=76.3
Q ss_pred eEEeCCCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-ccee---------------------------
Q 009206 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTG--------------------------- 189 (540)
Q Consensus 138 V~~lt~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~--------------------------- 189 (540)
+..++.+.+......+++++|.||++||++|+.+.|.+++++++++.. +.|.
T Consensus 23 l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (164)
T 2h30_A 23 MKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPK 102 (164)
T ss_dssp CEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTT
T ss_pred cCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCc
Confidence 344555555544456789999999999999999999999999886432 1333
Q ss_pred -eeeccchhhhhHHHHhCCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 190 -MVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 190 -~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.++++.+. .++++++ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 103 ~~~~~d~~~---~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 103 LPVVTDNGG---TIAQNLN------ISVYPSWALIGKDGDV----QRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp SCEEECTTC---HHHHHTT------CCSSSEEEEECTTSCE----EEEEESCCCHHHHHHHHHCT
T ss_pred ceEEEcCch---HHHHHcC------CCccceEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 34444333 3788888 9999999999 66753 45678999999999999876
No 164
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.03 E-value=3e-10 Score=100.29 Aligned_cols=88 Identities=9% Similarity=0.127 Sum_probs=72.2
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc-ccceeeeeccchh----------------------hhhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIR----------------------LATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~-~~~v~~Vdc~~~~----------------------~~~~l~~~~~~ 208 (540)
.+++++|.||++||++|+.+.|.+.++++.+.. .+.+..|+++... ....+++.++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH- 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC-
Confidence 678999999999999999999999999999973 4588889886410 1224788888
Q ss_pred CccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHH
Q 009206 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi 249 (540)
|.++|+++++ ++|.. ...+.|..+.+.|.+++
T Consensus 112 -----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 -----IITIPTSFLLNEKGEI----EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp -----CCEESEEEEECTTCCE----EEEEESCCCHHHHHHHH
T ss_pred -----cCccCeEEEEcCCCcE----EEEEcCCcCHHHHHHhh
Confidence 9999999999 66653 45788999999998876
No 165
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.00 E-value=4.4e-10 Score=100.80 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=75.3
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhCCCC---------------ccce--
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG---------------QIFF-- 213 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~~~~---------------~~~~-- 213 (540)
.++++||.||++||++|+...|.+.++++.+++. +.+..|++++.......++++++. +.|.
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 5789999999999999999999999999998654 489999998554444444433321 1233
Q ss_pred eeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 214 V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 103 v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGY----RQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTE----EEECCSCCCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 8899999988 66653 46788999999999999876
No 166
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.00 E-value=9.9e-11 Score=106.06 Aligned_cols=96 Identities=8% Similarity=0.052 Sum_probs=67.0
Q ss_pred Cccccc----cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhCCCCccceeeeeeE
Q 009206 145 DFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (540)
Q Consensus 145 ~F~~~v----~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Pt 219 (540)
+|++.+ .+++++||.|||+||++|+.+.|.+.+.....+-. ..+..|+++++.. .++.+++ |.++||
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~~--~~~~~~~------v~~~PT 103 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHETT--DKNLSPD------GQYVPR 103 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCCS--CGGGCTT------CCCSSE
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCch--hhHhhcC------CCCCCE
Confidence 455554 47899999999999999999999998753221111 2677888763321 1456666 999999
Q ss_pred EEEeC-CCCCCCCCcccccCC----------CCHHHHHHHHHHh
Q 009206 220 LVAFP-PGCKSSDCMTRFEGE----------LSVDAVTDWFATA 252 (540)
Q Consensus 220 l~~f~-~g~~~~~~~~~y~G~----------~~~~~i~~fi~~~ 252 (540)
+++|. +|.. ..+..|. .+.+.+++.+.+.
T Consensus 104 ~~f~~~~G~~----v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 104 IMFVDPSLTV----RADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp EEEECTTSCB----CTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred EEEECCCCCE----EEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 99998 6653 3444565 4566777777765
No 167
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.98 E-value=5.8e-10 Score=101.04 Aligned_cols=98 Identities=10% Similarity=0.087 Sum_probs=74.2
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh-hhHHHHhCCCC-----------ccc------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATHLAERKPIG-----------QIF------ 212 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~-~~~l~~~~~~~-----------~~~------ 212 (540)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.+..|++++... .....+++++. +.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 5789999999999999999999999999999876 5899999986433 12222222110 000
Q ss_pred eeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 213 FRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 213 ~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 113 ~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 113 GITGIPTSFVIDASGNV----SGVIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp CSCSSSEEEEECTTSBE----EEEECSCCCHHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 28999999998 56643 456789999999999998874
No 168
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.97 E-value=7.8e-11 Score=117.70 Aligned_cols=75 Identities=11% Similarity=-0.002 Sum_probs=59.3
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch---hhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCC
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~---~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~ 232 (540)
.+|+||||||+||++++|.|+++|+++ ..|||+.. ....++|++++ |+++||+++ +|
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l------~~Vd~d~~d~~~~~~~la~~~g------I~~vPT~~i--~G------ 259 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV------PYVECSPNGPGTPQAQECTEAG------ITSYPTWII--NG------ 259 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS------CEEESCSSCSSSCCCHHHHTTT------CCSTTEEEE--TT------
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc------CEEEEeecCchhhHHHHHHHcC------CcccCeEEE--CC------
Confidence 469999999999999999999998654 35666621 11335899998 999999655 66
Q ss_pred cccccCCCCHHHHHHHHHH
Q 009206 233 MTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 233 ~~~y~G~~~~~~i~~fi~~ 251 (540)
..|.|.++.++|.+|+.-
T Consensus 260 -~~~~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 260 -RTYTGVRSLEALAVASGY 277 (291)
T ss_dssp -EEEESCCCHHHHHHHTCC
T ss_pred -EEecCCCCHHHHHHHHCC
Confidence 348999999999999743
No 169
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.93 E-value=1.2e-09 Score=97.77 Aligned_cols=91 Identities=11% Similarity=0.183 Sum_probs=75.0
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh-------------------hhHHHHhCCCCcc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------ATHLAERKPIGQI 211 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~-------------------~~~l~~~~~~~~~ 211 (540)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.+..|++++.+. ...+++.++
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 100 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD---- 100 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC----
Confidence 5789999999999999999999999999999874 5888999875320 124778887
Q ss_pred ceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 101 --v~~~P~~~lid~~G~i----~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 101 --VSPLPTTFLINPEGKV----VKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp --CCSSCEEEEECTTSEE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999999 66643 45678999999999999887
No 170
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.89 E-value=1.9e-09 Score=93.74 Aligned_cols=90 Identities=14% Similarity=0.047 Sum_probs=70.2
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch-------------------------hhhhHHHHhC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-------------------------RLATHLAERK 206 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~-------------------------~~~~~l~~~~ 206 (540)
.+++++|.||++||++|+...|.++++++.+.....+..|++... .....+++.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 578999999999999999999999999998665566777743210 0112367777
Q ss_pred CCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHH
Q 009206 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 207 ~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~ 251 (540)
+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+
T Consensus 101 ~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 G------VRSYPTQAFIDKEGKL----VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp T------CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHH
T ss_pred C------cccCCeEEEECCCCcE----EEeecCCCcHHHHHHHHHh
Confidence 7 9999999999 66653 4577899999999998865
No 171
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.89 E-value=3.6e-09 Score=94.46 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=74.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh--------------------hhHHHHhCCCCc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~--------------------~~~l~~~~~~~~ 210 (540)
.+++++|.||++||++|+.+.|.++++++.+.+. +.+..|+++.+.. ...+++.++
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL--- 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT---
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC---
Confidence 4689999999999999999999999999998765 5889999886531 014777777
Q ss_pred cceeeeeeEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~~~Ptl~~f~-~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++. +|.. ...+.|..+.+.|.+++.+.
T Consensus 106 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 106 ---INGIPRFILLDRDGKI----ISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp ---CCSSCCEEEECTTSCE----EESSCCCTTCHHHHHHHHHH
T ss_pred ---cCCCCEEEEECCCCeE----EEccCCCCCHHHHHHHHHHH
Confidence 99999999997 5643 45567888999999999876
No 172
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.88 E-value=3.6e-09 Score=94.61 Aligned_cols=93 Identities=14% Similarity=-0.005 Sum_probs=72.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchh--------------------hhhHHHHhCCCCc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~--------------------~~~~l~~~~~~~~ 210 (540)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++.+. ....+++.++
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG--- 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT---
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC---
Confidence 5789999999999999999999999999999875 466665532100 1123777777
Q ss_pred cceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhhh
Q 009206 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (540)
Q Consensus 211 ~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~ 254 (540)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.+.
T Consensus 104 ---i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 104 ---TQVYPTSVLIGKKGEI----LKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp ---CCSSSEEEEECSSSCC----CEEEESSCCHHHHHHHHHHHHH
T ss_pred ---CCccCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHHH
Confidence 9999999999 56643 4568899999999999988743
No 173
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.88 E-value=3.2e-09 Score=94.02 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=71.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh-hhH---------------------HHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATH---------------------LAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~-~~~---------------------l~~~~~~ 208 (540)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.+..|+++++.. ... +++.++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD- 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC-
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC-
Confidence 5789999999999999999999999999999876 5899999884432 111 455555
Q ss_pred CccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. ...+.|..+.+.+++.+.+.
T Consensus 109 -----i~~~P~~~lid~~G~i----~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 -----IYATPVLYVLDKNKVI----IAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp -----CCSSCEEEEECTTCBE----EEESCCGGGHHHHHHHHHHH
T ss_pred -----cCCCCEEEEECCCCcE----EEecCCHHHHHHHHHHHHHH
Confidence 9999999999 56643 45667887777777777654
No 174
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.88 E-value=3.9e-08 Score=102.40 Aligned_cols=201 Identities=12% Similarity=0.113 Sum_probs=119.1
Q ss_pred eEEeCC-CCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt~-~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
|..++. ++|+. +..++.++|.||+++|.. ..+.|.++|..+.+...++.+.+. ++++++ |.+
T Consensus 120 v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~~~F~~~~~~-------~~~~~~------v~~ 182 (382)
T 2r2j_A 120 IQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDDCAFLSAFGD-------VSKPER------YSG 182 (382)
T ss_dssp CEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTTCEEEEEESC-------C--------------
T ss_pred ceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhccceEEEEehh-------hHHhhC------CCC
Confidence 455643 56777 677889999999987654 367899999999888888888774 456666 889
Q ss_pred eeEEEEeCCCCCCCCCcccccCCC-CHHHHHHHHHHhhhcCCcccccccchhhhhhhhhcCCCceEEEEEe-CCCCCCcH
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEGEL-SVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFS-KTGERASP 294 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G~~-~~~~i~~fi~~~v~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~-~~~~~~~~ 294 (540)
+| +++++.+.. .....|.|.+ +.++|.+|+... .+|.+..++.++ ...+... ..+.+++|. ........
T Consensus 183 ~p-i~~~~~~~~--~~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~---~~~~~v~f~~~~~~~~~~ 253 (382)
T 2r2j_A 183 DN-IIYKPPGHS--APDMVYLGAMTNFDVTYNWIQDK--CVPLVREITFEN-GEELTEE---GLPFLILFHMKEDTESLE 253 (382)
T ss_dssp CE-EEEECSSSS--SCCEECCSCTTCHHHHHHHHHHH--HSCSSEECCHHH-HHHHHTT---CCCEEEEEECTTCCHHHH
T ss_pred Cc-eEECCCCCC--CcCcccCCCCCCHHHHHHHHHhc--ccCceEecChhh-HHHHhcC---CCcEEEEEecCCchHHHH
Confidence 99 766665322 1347899999 999999999987 467666666555 3444432 234444443 32111112
Q ss_pred HH----HHHHHhhccCceEEEEEeeccccHHHHHHcCCC--CCCEEEEEeCCCCceeee---cCCCChhHHHHHHHhhcc
Q 009206 295 FV----RQISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY---YGSFNNSRLSEVMEQNKL 365 (540)
Q Consensus 295 ~~----~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~--~~Ptlv~fk~~~~~~~~y---~G~~~~~~l~~fi~~~~~ 365 (540)
.+ ...+..+++.+.|+.+... ....+++.||++ ..|+|+++.. +.. ..| .+.++.+.|.+|++...-
T Consensus 254 ~~~~~~~~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~~~~~P~i~i~~~-~~~-y~~~~~~~~~~~~~i~~F~~d~~~ 329 (382)
T 2r2j_A 254 IFQNEVARQLISEKGTINFLHADCD--KFRHPLLHIQKTPADCPVIAIDSF-RHM-YVFGDFKDVLIPGKLKQFVFDLHS 329 (382)
T ss_dssp HHHHHHHHHTGGGTTTSEEEEEETT--TTHHHHHHTTCCGGGCSEEEEECS-SCE-EECCCSGGGGSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeeEEEEEchH--HhHHHHHHcCCCccCCCEEEEEcc-hhc-CCCCccccccCHHHHHHHHHHHHC
Confidence 22 2244466677778887633 235688999997 4899988753 221 122 344566889999987544
Q ss_pred CCC
Q 009206 366 QEL 368 (540)
Q Consensus 366 ~~l 368 (540)
..+
T Consensus 330 Gkl 332 (382)
T 2r2j_A 330 GKL 332 (382)
T ss_dssp TTT
T ss_pred CCc
Confidence 333
No 175
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.86 E-value=1.2e-09 Score=92.70 Aligned_cols=78 Identities=14% Similarity=0.167 Sum_probs=66.4
Q ss_pred CcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCc
Q 009206 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (540)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~ 233 (540)
...++.|++|||+.|+.+.|..++++.++. +.+..||.++++. ++++++ ++ +|+|++|.+|..
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~---l~~~yg------v~-VP~l~~~~dG~~----- 91 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEH---LTRLYN------DR-VPVLFAVNEDKE----- 91 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHH---HHHHST------TS-CSEEEETTTTEE-----
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHH---HHHHhC------CC-CceEEEEECCEE-----
Confidence 356899999999999999999999998864 6899999997765 888888 87 999999999853
Q ss_pred ccccCCCCHHHHHHHH
Q 009206 234 TRFEGELSVDAVTDWF 249 (540)
Q Consensus 234 ~~y~G~~~~~~i~~fi 249 (540)
.+.|..+.+.|.+|+
T Consensus 92 -v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 92 -LCHYFLDSDVIGAYL 106 (107)
T ss_dssp -EECSSCCCHHHHHHH
T ss_pred -EEecCCCHHHHHHHh
Confidence 245888889998886
No 176
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.85 E-value=6.1e-09 Score=92.20 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=69.8
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHH-hcc-cceeeeeccchhh----------------------hhHHHHhCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l-~~~-~~v~~Vdc~~~~~----------------------~~~l~~~~~ 207 (540)
.+++++|.||++||++|+.+.|.+.++++.+ .+. +.+..|+++.... ...+++.++
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5689999999999999999999999999999 665 4888888885431 235788888
Q ss_pred CCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 208 ~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|. ..+... +.+.+.+++.+.
T Consensus 112 ------v~~~P~~~lid~~G~------i~~~~~-~~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ------ILTLPTNILLSPTGK------ILARDI-QGEALTGKLKEL 144 (148)
T ss_dssp ------CCSSSEEEEECTTSB------EEEESC-CHHHHHHHHHHH
T ss_pred ------CCCcCEEEEECCCCe------EEEecC-CHHHHHHHHHHH
Confidence 9999999999 5664 222332 788888888765
No 177
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.85 E-value=4.4e-09 Score=93.89 Aligned_cols=91 Identities=12% Similarity=0.061 Sum_probs=72.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhh-------------------HHHHhCCCCcc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT-------------------HLAERKPIGQI 211 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~-------------------~l~~~~~~~~~ 211 (540)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++.+.... .+++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 102 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYG---- 102 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcC----
Confidence 5789999999999999999999999999999876 588889888543211 3667777
Q ss_pred ceeeeeeEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 009206 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~--~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. ...+.|.. +.+.|.+++.+.
T Consensus 103 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 103 --VKGMPTSFLIDRNGKV----LLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp --CCSSSEEEEECTTSBE----EEEEESCCTTTHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCCE----EEEEccCCCcCHHHHHHHHHHH
Confidence 9999998888 56643 34566754 568999999887
No 178
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.83 E-value=9.7e-10 Score=101.69 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=61.3
Q ss_pred CCCccccccCCCcEEEEEEecCCCCccCChH-HH--HHHHHHHhcccceeeeeccchhhhhHHHHhC--------CCCcc
Q 009206 143 SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRLATHLAERK--------PIGQI 211 (540)
Q Consensus 143 ~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p-~~--~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~--------~~~~~ 211 (540)
.+.|.....+++++||.|||+||+.|+.|.| .| .++++.+.+...+.+||.++.+. +++.+ +
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~---l~~~y~~~~q~~~g---- 101 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPD---IDNIYMTVCQIILG---- 101 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHH---HHHHHHHHHHHHHS----
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCc---HHHHHHHHHHHHcC----
Confidence 3445555568999999999999999999999 45 57888887777889999997665 66665 6
Q ss_pred ceeeeeeEEEEeC-CCC
Q 009206 212 FFRRGLPSLVAFP-PGC 227 (540)
Q Consensus 212 ~~V~~~Ptl~~f~-~g~ 227 (540)
|.|+||+++|. +|.
T Consensus 102 --v~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 102 --RGGWPLNIIMTPGKK 116 (173)
T ss_dssp --CCCSSEEEEECTTSC
T ss_pred --CCCCcceeeECCCCC
Confidence 88999999997 553
No 179
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.83 E-value=4.9e-09 Score=93.89 Aligned_cols=87 Identities=17% Similarity=0.128 Sum_probs=71.3
Q ss_pred CcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc---chh---------------------hhhHHHHhCCCC
Q 009206 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG---DIR---------------------LATHLAERKPIG 209 (540)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~---~~~---------------------~~~~l~~~~~~~ 209 (540)
++++|.||++||++|+...|.+.++++.+ .+.+..|+++ ... ....+++.++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK-- 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS--
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC--
Confidence 89999999999999999999999999999 5688888882 110 2234777777
Q ss_pred ccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 210 QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 210 ~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 107 ----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 107 ----VLGQPWTFVVDREGKV----VALFAGRAGREALLDALLLA 142 (154)
T ss_dssp ----BCSSCEEEEECTTSEE----EEEEESBCCHHHHHHHHHHT
T ss_pred ----CCcccEEEEECCCCCE----EEEEcCCCCHHHHHHHHHhc
Confidence 9999998888 56643 45678999999999999887
No 180
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.79 E-value=4.6e-09 Score=95.73 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=67.5
Q ss_pred cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh--------------------hhhHHHHhCCCCc
Q 009206 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (540)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~--------------------~~~~l~~~~~~~~ 210 (540)
..+++++|.||++||++|+.+.|.++++++. .+.+..|++++.. ....+++.++
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG--- 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT---
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC---
Confidence 4788999999999999999999999999876 3577777754211 1123677777
Q ss_pred cceeeeeeEE-EEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 211 IFFRRGLPSL-VAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~~~Ptl-~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++|+. ++.++|.. ...+.|..+.+.+.+++.+.
T Consensus 123 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 123 ---VYGAPETFLIDGNGII----RYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp ---CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHTTHHH
T ss_pred ---ccccCEEEEECCCCeE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999954 55566753 35678999999999988776
No 181
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.78 E-value=1e-08 Score=94.98 Aligned_cols=98 Identities=11% Similarity=0.123 Sum_probs=74.4
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-c------ceeeeeccc--hhhhhHHHHhCCCC------------c
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-A------NTGMVELGD--IRLATHLAERKPIG------------Q 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~------~v~~Vdc~~--~~~~~~l~~~~~~~------------~ 210 (540)
.++++||.||++||++|+...|.+.++++.+.+. + .|..|++++ .......++++++. +
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 5689999999999999999999999999999875 5 899999986 33344455554431 0
Q ss_pred ---cceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 211 ---IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 211 ---~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.|.|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRP----AAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCE----EEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHHH
Confidence 1248899976666 56653 456789999999999998763
No 182
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.76 E-value=4.5e-09 Score=94.16 Aligned_cols=90 Identities=11% Similarity=0.106 Sum_probs=68.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh--------------------hhhHHHHhCCCCcc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~--------------------~~~~l~~~~~~~~~ 211 (540)
.+++++|.||++||++|+.+.|.++++++. +.+.+..|++++.. ....+++.++
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 114 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG---- 114 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC----
Confidence 478999999999999999999999999876 44677777764321 1123677777
Q ss_pred ceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 212 ~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 115 --v~~~P~~~~id~~G~i----~~~~~g~~~~~~l~~~l~~~l 151 (156)
T 1kng_A 115 --VYGVPETFVVGREGTI----VYKLVGPITPDNLRSVLLPQM 151 (156)
T ss_dssp --CCSSCEEEEECTTSBE----EEEEESCCCHHHHHHTHHHHH
T ss_pred --cCccCeEEEEcCCCCE----EEEEeCCCCHHHHHHHHHHHH
Confidence 9999976666 66643 356789999999999987763
No 183
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.75 E-value=1.1e-08 Score=92.13 Aligned_cols=92 Identities=15% Similarity=0.024 Sum_probs=71.5
Q ss_pred CCCcEEEEEEecCCCCccCC-hHHHHHHHHHHhcc-cceeeeecc-------chhhhh----------------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-ANTGMVELG-------DIRLAT---------------------- 200 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~-~~v~~Vdc~-------~~~~~~---------------------- 200 (540)
.+++++|.||++||++|+.. .|.+.++++++++. +.+..|+++ ......
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 47899999999999999997 99999999999754 478888763 111111
Q ss_pred -HHHHhCCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 201 -HLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 201 -~l~~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.+++.|+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 107 ~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQ------MRGTPSLLLIDKAGDL----RAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTT------CCSSSEEEEECTTSEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcC------CCCCCEEEEECCCCCE----EEEEeCCCCHHHHHHHHHHHh
Confidence 2666776 9999999998 55643 456789999999999998774
No 184
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.73 E-value=2.2e-09 Score=87.77 Aligned_cols=73 Identities=23% Similarity=0.215 Sum_probs=60.2
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccc
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y 236 (540)
++.|++|||+.|+.+.|.+++++.++ +.+||.++++. ++++++ ++ +|||++ .+|.. .
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~---l~~~~g------~~-vPtl~~-~~G~~-----v-- 59 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAA---LESAYG------LR-VPVLRD-PMGRE-----L-- 59 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHH---HHHHHT------TT-CSEEEC-TTCCE-----E--
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHH---HHHHhC------CC-cCeEEE-ECCEE-----E--
Confidence 78899999999999999998876432 68899997775 888888 88 999988 77753 2
Q ss_pred cCCCCHHHHHHHHHHh
Q 009206 237 EGELSVDAVTDWFATA 252 (540)
Q Consensus 237 ~G~~~~~~i~~fi~~~ 252 (540)
.|..+.+.|.+|+.+.
T Consensus 60 ~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 60 DWPFDAPRLRAWLDAA 75 (87)
T ss_dssp ESCCCHHHHHHHHHTC
T ss_pred eCCCCHHHHHHHHHHH
Confidence 3888999999998765
No 185
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.73 E-value=1.3e-08 Score=91.10 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=68.1
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh----------------------hhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~----------------------~~~l~~~~~~ 208 (540)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|++++... ...+++.++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~- 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC- 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC-
Confidence 5689999999999999999999999999999876 5889999885321 245888888
Q ss_pred CccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.++||++++ ++|.. ...+ .+.+.|.+++.+.
T Consensus 107 -----v~~~P~~~lid~~G~i----~~~~---~~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 -----IVGFPHIILVDPEGKI----VAKE---LRGDDLYNTVEKF 139 (152)
T ss_dssp -----CCSSCEEEEECTTSEE----EEEC---CCTTHHHHHHHHH
T ss_pred -----CCcCCeEEEECCCCeE----EEee---CCHHHHHHHHHHH
Confidence 9999999999 56642 2222 2445777777665
No 186
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.73 E-value=1e-08 Score=92.32 Aligned_cols=92 Identities=10% Similarity=0.009 Sum_probs=71.8
Q ss_pred CCCcEEEEEEecCCCCccC-ChHHHHHHHHHHhcc-cceeeeecc-------chhhhh----------------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-ANTGMVELG-------DIRLAT---------------------- 200 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~-l~p~~~~~A~~l~~~-~~v~~Vdc~-------~~~~~~---------------------- 200 (540)
.+++++|.||++||++|+. +.|.++++++.+++. +.+..|+++ ......
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 5789999999999999999 599999999999876 478888862 111111
Q ss_pred --HHHHhCCCCccceeeeeeEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 201 --HLAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 201 --~l~~~~~~~~~~~V~~~Ptl~~f~-~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.+++.|+ |.++|+++++. +|.. ...+.|..+.+.|.+++.+.+
T Consensus 109 ~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 109 IPSTMKKYR------LEGTPSIILADRKGRI----RQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp SCHHHHHTT------CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHHHHHHH
T ss_pred hhhHHHhcc------cCccceEEEECCCCcE----EEEecCcCCHHHHHHHHHHHH
Confidence 1566666 99999999995 5643 456789999999999998774
No 187
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.72 E-value=4.1e-09 Score=97.05 Aligned_cols=69 Identities=10% Similarity=0.016 Sum_probs=55.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~ 227 (540)
.+++++|.|||+|||+|+.+.|.+++++.... .+.+..||.++++. +++++.. ..|.++||+++|.+|.
T Consensus 53 ~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~---~~~~~~~---~~v~~iPt~i~~~~~G 121 (167)
T 1z6n_A 53 ERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAED---DLRQRLA---LERIAIPLVLVLDEEF 121 (167)
T ss_dssp CSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHH---HTTTTTT---CSSCCSSEEEEECTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHH---HHHHHHH---cCCCCcCeEEEECCCC
Confidence 46789999999999999999999999998764 46888999886654 6666521 1288999999999864
No 188
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.71 E-value=2.5e-08 Score=90.49 Aligned_cols=88 Identities=9% Similarity=0.101 Sum_probs=70.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc------------------chh-hh-------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG------------------DIR-LA------------- 199 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~------------------~~~-~~------------- 199 (540)
.+++++|.||++||++|+...|.+.++++.+. .+.|..|+++ +.. ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 56899999999999999999999999999988 5688888887 222 11
Q ss_pred -----hHHHHhCCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCC-CHHHHHHHHHHh
Q 009206 200 -----THLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL-SVDAVTDWFATA 252 (540)
Q Consensus 200 -----~~l~~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~-~~~~i~~fi~~~ 252 (540)
..+++.++ |.++|+++++ ++|.. .+.|.. +.+.|.+++.+.
T Consensus 115 ~~~d~~~~~~~~~------v~~~P~~~lid~~G~i------~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFN------VRSIDYIVIMDKSSNV------LYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTT------CCSSSEEEEEETTCCE------EEEEESCCHHHHHHHHHHC
T ss_pred EEeChHHHHHHhC------CCCceEEEEEcCCCcE------EEeCCCCCHHHHHHHHHHH
Confidence 24677777 9999999999 56642 237888 899999988765
No 189
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.70 E-value=1.4e-08 Score=90.08 Aligned_cols=70 Identities=10% Similarity=0.040 Sum_probs=58.0
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc--ccceeeeeccchh---------------------hhhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~--~~~v~~Vdc~~~~---------------------~~~~l~~~~~~ 208 (540)
.+++++|.||++||++|+.+.|.++++++.+.+ .+.+..|++++.. ....+++.++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD- 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC-
Confidence 568999999999999999999999999999984 4578888888532 1245788888
Q ss_pred CccceeeeeeEEEEeC--CCC
Q 009206 209 GQIFFRRGLPSLVAFP--PGC 227 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f~--~g~ 227 (540)
|.++||++++. +|.
T Consensus 106 -----v~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 106 -----VKSIPTLVGVEADSGN 121 (144)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCc
Confidence 99999999995 664
No 190
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.66 E-value=1.9e-08 Score=88.99 Aligned_cols=93 Identities=11% Similarity=0.135 Sum_probs=64.0
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHH---HHHHHhcc-cceeeeeccchhhh-hHHHHhCC--------------CCccc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRLA-THLAERKP--------------IGQIF 212 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~---~A~~l~~~-~~v~~Vdc~~~~~~-~~l~~~~~--------------~~~~~ 212 (540)
.+++++|.||++||++|+...|.+.+ +.+.+++. +.+..|+.+++... ....++++ +.+.|
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 109 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLY 109 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhc
Confidence 35899999999999999999999999 99998764 47778888755321 11111111 12344
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~ 250 (540)
.|.++||++++..+.. ..+.+ .+.+.|.+|+.
T Consensus 110 ~v~~~P~~~lid~~G~-----i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 110 DLRAIPTLYLLDKNKT-----VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CCTTCSEEEEECTTCB-----EEEEE-ECHHHHHHHHH
T ss_pred CCCcCCeEEEECCCCc-----EEecC-CCHHHHHHHHh
Confidence 5999999999954432 33332 35788887764
No 191
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.65 E-value=1.9e-08 Score=89.50 Aligned_cols=70 Identities=9% Similarity=0.040 Sum_probs=58.1
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc--ccceeeeeccchh---------------------hhhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~--~~~v~~Vdc~~~~---------------------~~~~l~~~~~~ 208 (540)
.+++++|.||++||++|+.+.|.++++++.+.+ .+.+..|++++.. ....++++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN- 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT-
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC-
Confidence 578999999999999999999999999999983 4578888888532 1245888888
Q ss_pred CccceeeeeeEEEEeC--CCC
Q 009206 209 GQIFFRRGLPSLVAFP--PGC 227 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f~--~g~ 227 (540)
|.++||++++. +|.
T Consensus 106 -----v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 106 -----VESIPTLIGVDADSGD 121 (146)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCe
Confidence 99999999996 564
No 192
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.64 E-value=2.2e-08 Score=88.34 Aligned_cols=94 Identities=15% Similarity=0.199 Sum_probs=67.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHH---HHHHHhcc-cceeeeeccchhh-hhHHHHhCCC--------------Cccc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRL-ATHLAERKPI--------------GQIF 212 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~---~A~~l~~~-~~v~~Vdc~~~~~-~~~l~~~~~~--------------~~~~ 212 (540)
.+++++|.||++||++|+...|.+.+ +.+.+++. +.+..|+++++.. .....+++++ .+.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 47899999999999999999999998 88888765 4888888884432 2222232221 1134
Q ss_pred eeeeeeEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~-~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.|.++|+++++. +|. ..+ +..+.+.|.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~------i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKR------VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCB------EEE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCC------EEe-cCCCHHHHHHHHHHH
Confidence 599999999995 553 233 668899999988654
No 193
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.63 E-value=2.8e-08 Score=89.69 Aligned_cols=91 Identities=12% Similarity=0.134 Sum_probs=68.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch----------------hhhhHHHHhCCCCcccee
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI----------------RLATHLAERKPIGQIFFR 214 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~----------------~~~~~l~~~~~~~~~~~V 214 (540)
.+++++|.||++||++|+...|.+.++++.+... +.+..|+++.. .....+++.++ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------v 113 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYG------A 113 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTT------C
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhC------C
Confidence 5789999999999999999999999999999743 48888888751 01234888888 9
Q ss_pred eeeeEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 009206 215 RGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (540)
Q Consensus 215 ~~~Ptl~~f-~~g~~~~~~~~~y~G~~--~~~~i~~fi~~~ 252 (540)
.++|+++++ ++|.. ...+.|.. +..++++.+.+.
T Consensus 114 ~~~P~~~lid~~G~i----~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 114 NRLPDTFIVDRKGII----RQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp CSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTT
T ss_pred CCcceEEEEcCCCCE----EEEEeCCCccchHHHHHHHHhh
Confidence 999997777 55643 45566754 456666666543
No 194
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.63 E-value=2.9e-08 Score=88.68 Aligned_cols=91 Identities=10% Similarity=0.193 Sum_probs=69.8
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch-hh-h------------------hHHHHhCCCCc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI-RL-A------------------THLAERKPIGQ 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~-~~-~------------------~~l~~~~~~~~ 210 (540)
.+++++|.||++||++|+...|.+.++++.+.+. +.+..|+++.+ .. . ..+++.++
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG--- 103 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT---
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC---
Confidence 5789999999999999999999999999999874 48888888854 11 1 22666777
Q ss_pred cceeeeeeEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 009206 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~--~~~~i~~fi~~~ 252 (540)
|.++|+++++ ++|.. ...+.|.. +.+.+.+++.+.
T Consensus 104 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 104 ---TTGVPETFVIDRHGVI----LKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---CCSBCEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCCCCeEEEECCCCcE----EEEEcCCCccccHHHHHHHHHH
Confidence 9999976666 56643 34566765 667888888664
No 195
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.61 E-value=2.3e-08 Score=88.41 Aligned_cols=70 Identities=10% Similarity=0.128 Sum_probs=57.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHh--cccceeeeeccchh---------------------hhhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~--~~~~v~~Vdc~~~~---------------------~~~~l~~~~~~ 208 (540)
.+++++|.||++||++|+.+.|.+++++++++ ..+.+..|+++.+. ....++++++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG- 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT-
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC-
Confidence 57899999999999999999999999999997 34578888888532 1234778877
Q ss_pred CccceeeeeeEEEEeC--CCC
Q 009206 209 GQIFFRRGLPSLVAFP--PGC 227 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f~--~g~ 227 (540)
|.++||++++. +|.
T Consensus 106 -----v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 106 -----VESIPTLITINADTGA 121 (144)
T ss_dssp -----CCSSSEEEEEETTTCC
T ss_pred -----CCCCCEEEEEECCCCe
Confidence 99999999997 554
No 196
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.61 E-value=2.9e-08 Score=75.88 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=46.9
Q ss_pred ccccccCccCC---CCHHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCC
Q 009206 38 SHYDALGIKPY---SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTD 89 (540)
Q Consensus 38 ~~y~iLgv~~~---a~~~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d 89 (540)
.-|.||||+++ ++.++|+++||+|....|||++ |+.....+|++|++.|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 46889999999 9999999999999999999996 788899999999999864
No 197
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.58 E-value=6.9e-08 Score=99.34 Aligned_cols=92 Identities=11% Similarity=-0.048 Sum_probs=73.8
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch------h------------------hhhHHHHhC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI------R------------------LATHLAERK 206 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~------~------------------~~~~l~~~~ 206 (540)
.++++||.||++||++|+...|.++++++++++. +.|..|+|++. . ....+++.+
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 4789999999999999999999999999999874 58888887521 0 012367777
Q ss_pred CCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 207 ~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 161 g------V~~~Pt~~lID~~G~I----v~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 R------NRYWPAEYLIDATGTV----RHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp T------CCEESEEEEECTTSBE----EEEEESBCCHHHHHHHHHHHH
T ss_pred C------CCccCEEEEEeCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 7 9999999888 56643 456789999999999998764
No 198
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.56 E-value=5.5e-08 Score=87.39 Aligned_cols=87 Identities=13% Similarity=-0.021 Sum_probs=67.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhh--------------------HHHHhCCCCc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT--------------------HLAERKPIGQ 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~--------------------~l~~~~~~~~ 210 (540)
.+++++|.||++||++|+...|.+.++++++++. +.|..|++++..... .+++.|+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--- 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN--- 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT---
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC---
Confidence 3689999999999999999999999999999876 588999988554210 1566666
Q ss_pred cceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHH
Q 009206 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDW 248 (540)
Q Consensus 211 ~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~f 248 (540)
|.++|+++++ ++|.. ...+.|..+.+....-
T Consensus 111 ---v~~~P~~~lid~~G~i----~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 111 ---VTNLPSVFLVNRNNEL----SARGENIKDLDEAIKK 142 (152)
T ss_dssp ---CCSCSEEEEEETTTEE----EEETTTCSCHHHHHHH
T ss_pred ---cccCceEEEECCCCeE----EEecCCHHHHHHHHHH
Confidence 9999999999 56643 4566788777665543
No 199
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.54 E-value=9.9e-08 Score=88.37 Aligned_cols=98 Identities=15% Similarity=0.270 Sum_probs=73.1
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch--hhhhHHHHhCCCC-------------cccee-
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--RLATHLAERKPIG-------------QIFFR- 214 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~--~~~~~l~~~~~~~-------------~~~~V- 214 (540)
.+++++|.||++||++|+...|.++++.+.+++. +.|..|+++.. .....+++++++. +.|.+
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 5689999999999999999999999999999743 48888988854 3345577777731 01112
Q ss_pred ---eeeeEEEEe-CCCCCCCCCcccccCCCC--HHHHHHHHHHhh
Q 009206 215 ---RGLPSLVAF-PPGCKSSDCMTRFEGELS--VDAVTDWFATAI 253 (540)
Q Consensus 215 ---~~~Ptl~~f-~~g~~~~~~~~~y~G~~~--~~~i~~fi~~~v 253 (540)
.++|+++++ ++|.. ...|.|..+ .+.|.+++.+.+
T Consensus 139 ~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCE----IATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp TCCSSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCE----EEEEecCCccCHHHHHHHHHHHh
Confidence 389999999 56643 355677764 788999887763
No 200
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.54 E-value=5.5e-08 Score=88.85 Aligned_cols=68 Identities=9% Similarity=0.089 Sum_probs=57.0
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc--ccceeeeeccchhh---------------------hhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIRL---------------------ATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~--~~~v~~Vdc~~~~~---------------------~~~l~~~~~~ 208 (540)
.++++||.||++||++|++..|.+.++++.+++ .+.|..|++++... ...+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS- 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC-
Confidence 578999999999999999999999999999985 34788888875521 145788888
Q ss_pred CccceeeeeeEEEEeCC
Q 009206 209 GQIFFRRGLPSLVAFPP 225 (540)
Q Consensus 209 ~~~~~V~~~Ptl~~f~~ 225 (540)
|.++||++++..
T Consensus 126 -----v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 -----VESIPTLIGLNA 137 (165)
T ss_dssp -----CCSSSEEEEEET
T ss_pred -----CCCCCEEEEEeC
Confidence 999999999974
No 201
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.52 E-value=1.1e-07 Score=88.73 Aligned_cols=93 Identities=9% Similarity=-0.012 Sum_probs=70.6
Q ss_pred CCC-cEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch--------h------------------hhhHHH
Q 009206 152 DSK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------R------------------LATHLA 203 (540)
Q Consensus 152 ~~~-~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~--------~------------------~~~~l~ 203 (540)
.++ +++|.||++||++|+...|.++++.+++.+. +.+..|+++.. . ....++
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 344 5999999999999999999999999999875 58888988421 0 112366
Q ss_pred HhCCCCccceeeeeeEEEEe-CCCCCCCCCccc---------ccCCCCHHHHHHHHHHhhh
Q 009206 204 ERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTR---------FEGELSVDAVTDWFATAIL 254 (540)
Q Consensus 204 ~~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~---------y~G~~~~~~i~~fi~~~v~ 254 (540)
+.++ |.++|+++++ ++|.. ... +.|..+.+.|.+++.+.+.
T Consensus 124 ~~~~------v~~~P~~~lid~~G~i----~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 124 KAYD------AACTPDFYIFDRDLKC----VYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp HHHT------CCEESEEEEEETTCBE----EEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred HHhC------CCCCCeEEEEcCCCeE----EEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 7777 9999999999 56642 222 4577788999999887643
No 202
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.51 E-value=8.7e-08 Score=88.42 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=66.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh-h-------------------hhHHHHhCCCCcc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-L-------------------ATHLAERKPIGQI 211 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~-~-------------------~~~l~~~~~~~~~ 211 (540)
.+++++|.||++||++|+...|.+++++++ + +.|..|++++.. . ...+++.|+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~-v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 129 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--G-VVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG---- 129 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--T-CEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--C-CEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC----
Confidence 478999999999999999999999999876 2 567777753211 1 123555666
Q ss_pred ceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 212 ~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
|.++|+++++ ++|.. ...+.|..+.+.+.+++.+.+
T Consensus 130 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 130 --VYGAPETYLIDKQGII----RHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp --CCSSCEEEEECTTCBE----EEEEESCCCHHHHHHHTHHHH
T ss_pred --CCCCCeEEEECCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 8999987777 55643 456779999999999887763
No 203
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.50 E-value=1.8e-07 Score=86.88 Aligned_cols=91 Identities=9% Similarity=0.063 Sum_probs=68.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch--------h------------------hhhHHHHh
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------R------------------LATHLAER 205 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~--------~------------------~~~~l~~~ 205 (540)
.+++++|.||++||++|+...|.++++.+++.+.+.|..|+++.. . ....+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 468999999999999999999999999999976677888888421 0 11236677
Q ss_pred CCCCccceeeeeeEEEEe-CCCCCCCCCccccc----------CCCCHHHHHHHHHHhhh
Q 009206 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFE----------GELSVDAVTDWFATAIL 254 (540)
Q Consensus 206 ~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~----------G~~~~~~i~~fi~~~v~ 254 (540)
++ |.++|+++++ ++|. ..+. |..+.+.|.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~------i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 112 YR------ALRTPEVFLFDERRL------LRYHGRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp TT------CCEESEEEEECTTCB------EEEEECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred cC------CCCCCeEEEECCCCc------EEEEEecCCccccccccCHHHHHHHHHHHHc
Confidence 77 9999999999 4553 2233 34467888888887643
No 204
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.49 E-value=6.4e-08 Score=100.79 Aligned_cols=62 Identities=26% Similarity=0.516 Sum_probs=52.9
Q ss_pred cccccccCccCCCCHHHHHHHHHHHHHhcCCCCCCCc------HHHHHHHHHHHHHcCChhhhhhhhh
Q 009206 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS------TADFLKIQYAYELLTDPLWKRNYDV 98 (540)
Q Consensus 37 ~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~------~~~f~~i~~Ay~~L~d~~~r~~yd~ 98 (540)
.++|.+||+.+.++.++|+++|+++++++|||+.+.. .++|++|.+||++|+||++|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999988743 4579999999999999999999997
No 205
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=4.3e-07 Score=80.91 Aligned_cols=88 Identities=11% Similarity=0.065 Sum_probs=68.0
Q ss_pred CCCcEEEEEEecCCCC--ccCChHHHHHHHHHH-hcc-cceeeeeccchhh----------------------hhHHHHh
Q 009206 152 DSKPWLIQVYSDGSYL--CGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAER 205 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~--C~~l~p~~~~~A~~l-~~~-~~v~~Vdc~~~~~----------------------~~~l~~~ 205 (540)
.+++++|.||++||++ |+...|.+.++.+++ ++. +.+..|++++.+. ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 999999999999999 665 4888888885531 1246777
Q ss_pred CCCCccceeeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 206 ~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|+ |.++|+++++ ++|.. .+.. .+.+.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~i------~~~~-~~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YS------IYKIPANILLSSDGKI------LAKN-LRGEELKKKIENI 146 (150)
T ss_dssp TT------CCSSSEEEEECTTSBE------EEES-CCHHHHHHHHHHH
T ss_pred cC------CCccCeEEEECCCCEE------EEcc-CCHHHHHHHHHHH
Confidence 77 9999999999 56642 2222 2777888877665
No 206
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.46 E-value=1e-08 Score=87.68 Aligned_cols=88 Identities=13% Similarity=0.143 Sum_probs=55.1
Q ss_pred cccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh--hhhHHHHhCCCCccceeeeeeEEEEeC
Q 009206 147 PSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--LATHLAERKPIGQIFFRRGLPSLVAFP 224 (540)
Q Consensus 147 ~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~--~~~~l~~~~~~~~~~~V~~~Ptl~~f~ 224 (540)
+.+++. +++++ ||++||++|+.+.|.+++++.. ..+..||.+.+. ....++++++ |.++||+ |.
T Consensus 14 ~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~------v~~~Pt~--~~ 79 (116)
T 2e7p_A 14 KELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTG------RGTVPNV--FI 79 (116)
T ss_dssp HHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE--EE
T ss_pred HHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhC------CCCcCEE--EE
Confidence 334443 45666 9999999999999999887533 244455544320 1134788888 9999999 55
Q ss_pred CCCCCCCCcccccCCC---CHHHHHHHHHHh
Q 009206 225 PGCKSSDCMTRFEGEL---SVDAVTDWFATA 252 (540)
Q Consensus 225 ~g~~~~~~~~~y~G~~---~~~~i~~fi~~~ 252 (540)
+|.. ...|.|.. +.+.|.+|+.+.
T Consensus 80 ~g~~----v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 80 GGKQ----IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp TTEE----EECHHHHHHHHHTTCHHHHHHHT
T ss_pred CCEE----ECChHHHHHHHhCChHHHHHHHc
Confidence 6642 23333333 444566666543
No 207
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.46 E-value=2.7e-07 Score=83.47 Aligned_cols=99 Identities=10% Similarity=0.102 Sum_probs=72.6
Q ss_pred CCccccc----cCCCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 144 EDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 144 ~~F~~~v----~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
.+|++.+ ..++++||.||++||..|+.|...- .++++.+.....+.++|.++. ....++++|+ |.+
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~-~~~~l~~~y~------v~~ 101 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSE-EGQRYIQFYK------LGD 101 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSH-HHHHHHHHHT------CCS
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCH-hHHHHHHHcC------CCC
Confidence 4566665 3589999999999999999996543 556666755556777787643 3345888888 999
Q ss_pred eeEEEEeCCC-CCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 217 LPSLVAFPPG-CKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 217 ~Ptl~~f~~g-~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+|+++++.+. .. ....+.| .+++.+++++.+.+
T Consensus 102 ~P~~~fld~~~G~---~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 102 FPYVSILDPRTGQ---KLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp SSEEEEECTTTCC---CCEEESS-CCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCc---EeeecCC-CCHHHHHHHHHHHH
Confidence 9999999653 22 1344556 89999999987763
No 208
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.43 E-value=4.5e-08 Score=78.12 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=45.6
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc-chhhhhHHHHhCCCCccceeeeeeEEEEeCCCC
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-DIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~-~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~ 227 (540)
++.||++||++|+++.|.++++++++.....+..||.+ ++. .+++++| |+++||+++ +|.
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~g------v~~vPt~~i--~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARI---AEAEKAG------VKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTH---HHHHHHT------CCEEEEEEE--TTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhH---HHHHHcC------CCcCCEEEE--CCE
Confidence 67899999999999999999988766444455566553 233 3778888 999999977 553
No 209
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.81 E-value=2.6e-08 Score=87.77 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=53.8
Q ss_pred CC-cEEEEEEecCCCCccCChHHHHHHHHHHh---cccceeeeeccchhh-h---------------------hHHHHhC
Q 009206 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRL-A---------------------THLAERK 206 (540)
Q Consensus 153 ~~-~~lV~FYapwC~~C~~l~p~~~~~A~~l~---~~~~v~~Vdc~~~~~-~---------------------~~l~~~~ 206 (540)
++ +++|.||++||++|+.+.|.++++++.++ ..+.+..|++++... . ..+++.+
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 99999999999999999999999999884 234788888874421 0 2356666
Q ss_pred CCCccceeeeeeEEEEeC-CCC
Q 009206 207 PIGQIFFRRGLPSLVAFP-PGC 227 (540)
Q Consensus 207 ~~~~~~~V~~~Ptl~~f~-~g~ 227 (540)
+ |.++||++++. +|.
T Consensus 105 ~------v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 105 G------ITGIPALVIVKKDGT 120 (143)
Confidence 6 99999999997 554
No 210
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.40 E-value=1.5e-07 Score=85.62 Aligned_cols=97 Identities=13% Similarity=0.021 Sum_probs=72.9
Q ss_pred CCCcEEEEEEecCCCC-ccCChHHHHHHHHHHhc----ccceeeeeccchh----hh---------------------hH
Q 009206 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDIR----LA---------------------TH 201 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~----~~~v~~Vdc~~~~----~~---------------------~~ 201 (540)
.+++++|.||++||++ |+...|.+.++.++++. .+.|..|+++.++ .. ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 5689999999999998 99999999999998874 3578888887321 11 24
Q ss_pred HHHhCCC---------CccceeeeeeEEEEeCCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 009206 202 LAERKPI---------GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (540)
Q Consensus 202 l~~~~~~---------~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~--~~~~i~~fi~~~ 252 (540)
+++.+++ .+.|.|.++|+++++.+|.. ...|.|.. +.+.|.+.+.+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i----~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRL----VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEE----EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEE----EEEECCCCCCCHHHHHHHHHHh
Confidence 6666654 23356889999999995532 45567877 889999888653
No 211
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.38 E-value=9.8e-07 Score=79.46 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=70.0
Q ss_pred CCCcEEEEEEecCCCC-ccCChHHHHHHHHHHhc-----ccceeeeeccchh-------------------------hhh
Q 009206 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~-----~~~v~~Vdc~~~~-------------------------~~~ 200 (540)
.+++++|.||+.||+. |....|.++++.++++. .+.+..|+++..+ ...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4689999999999998 99999999999999975 4477888876421 112
Q ss_pred HHHHhCCCCccceeeeee---------------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 201 ~l~~~~~~~~~~~V~~~P---------------tl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.+++.++ |.+.| +++++ ++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 102 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYR------VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF----LDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTT------CCEEEEEECTTSCEEEEECCEEEEECTTSCE----EEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcC------eEEEecCCCCCCCeeEeccceEEEECCCCeE----EEEeCCCCCHHHHHHHHHHHH
Confidence 3666666 88899 55555 66653 456788899999999987763
No 212
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.37 E-value=7.5e-07 Score=83.08 Aligned_cols=98 Identities=9% Similarity=-0.051 Sum_probs=71.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHH-HhCCCC------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIG------------ 209 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~-~~~~~~------------ 209 (540)
.++++||.||++||+.|+...|.++++.+++++. +.|..|++++ .......+ +++++.
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 5689999999999999999999999999999876 5888898862 22333344 332210
Q ss_pred -----------ccceeeeee------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 210 -----------QIFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 210 -----------~~~~V~~~P------tl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+.|.+.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE----EEEECCCCCHHHHHHHHHHHH
Confidence 013588899 55444 67753 456779889999999988764
No 213
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.35 E-value=3.4e-06 Score=84.70 Aligned_cols=158 Identities=10% Similarity=0.152 Sum_probs=105.1
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEeC---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVI-FFSK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv-~f~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
++..+ +++.+.. .+++.+| |+.+ .|....|.+..++..+.+.+.++.|.........++++|+|.++||+++|
T Consensus 22 lt~~~-f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 22 LTPKS-FDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp CCHHH-HHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred eCHHH-HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 45444 5666632 2344455 4433 23345677888888887778888887543345789999999999999999
Q ss_pred eCCC----------------CceeeecCCCChhHHHHHHHhhccCCCccccccchhhhccCCCCCCCCCCCCceeEEEEE
Q 009206 338 KDPG----------------VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVIL 401 (540)
Q Consensus 338 k~~~----------------~~~~~y~G~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~k~~~~~lcvi~ 401 (540)
+++. ..+..|.|.++.+.|.+|+.....+.+.++.+...++..... .. ..+|++
T Consensus 99 ~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~-----~~-----~~~vi~ 168 (298)
T 3ed3_A 99 RPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK-----SP-----KLSVVL 168 (298)
T ss_dssp ECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS-----CS-----SEEEEE
T ss_pred ECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc-----CC-----ceEEEE
Confidence 9864 135679999999999999999877767777666655533311 01 266777
Q ss_pred ecCCChhhHHHHHHHHHHHHhhccccccccccccCCchHHHHhccCCceEEEEEechh
Q 009206 402 AGRLSPELNKMRETIRRVQETLLSDDESNAADTDQSLAPAAVAFRNKRLTFAWLDGEA 459 (540)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~f~wvd~~~ 459 (540)
+...+.. ...++.+|. .+++ .+.|+.+....
T Consensus 169 fs~~~~~----~~~f~~~A~----------------------~~~~-~~~F~~v~~~~ 199 (298)
T 3ed3_A 169 FSKQDKI----SPVYKSIAL----------------------DWLG-KFDFYSISNKK 199 (298)
T ss_dssp EESSSSC----CHHHHHHHH----------------------HTBT-TEEEEEEEGGG
T ss_pred EcCCCcc----hHHHHHHHH----------------------Hhhc-CcEEEEEcchH
Confidence 7543322 234555555 5644 48899987643
No 214
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.35 E-value=2.1e-07 Score=100.87 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=75.2
Q ss_pred EeCCCCcccccc-CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeee
Q 009206 140 VVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (540)
Q Consensus 140 ~lt~~~F~~~v~-~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~P 218 (540)
.++.+.++.+.. .....++.||++||++|+.+.|.++++|.... .+.+.+||.++++. ++++++ |.++|
T Consensus 103 ~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~---~~~~~~------i~svP 172 (521)
T 1hyu_A 103 KEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQN---EITERN------VMGVP 172 (521)
T ss_dssp CSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHH---HHHHTT------CCSSS
T ss_pred CCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHH---HHHHhC------CCccC
Confidence 456666655543 45677889999999999999999999998865 56899999996665 899999 99999
Q ss_pred EEEEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 009206 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 219 tl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~ 251 (540)
|+++ +|.. ...|..+.+.|.+|+.+
T Consensus 173 t~~i--~g~~------~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 173 AVFV--NGKE------FGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp EEEE--TTEE------EEESCCCHHHHHHHHCC
T ss_pred EEEE--CCEE------EecCCCCHHHHHHHHhh
Confidence 9977 6642 24599999999999754
No 215
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.31 E-value=3e-06 Score=73.75 Aligned_cols=100 Identities=19% Similarity=0.224 Sum_probs=74.6
Q ss_pred cCCcccc--cccchhhhhhhhhcCCCceEEEEE-eCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCC
Q 009206 255 KLPRIFY--YTKESMGKNFLAKTGPHKVKVIFF-SKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESA 331 (540)
Q Consensus 255 ~lp~~~~--i~~~~~~~~fl~~~~~~~~~vv~f-~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~ 331 (540)
.+|+... +++...++.|+... .+.||.| .+.+....+.+..+|..+ +.+.|+.+. ..+++++++++ .
T Consensus 17 ~gP~~~~~~i~s~~e~e~fi~~~---~v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~-----~~~v~~~~~v~-~ 86 (124)
T 2l4c_A 17 PGAAQEPTWLTDVPAAMEFIAAT---EVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNIT-G 86 (124)
T ss_dssp SCCSCCCEECCSHHHHHHHHHTS---SEEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEEC-----CHHHHHHTTCC-S
T ss_pred cCCCCcceEcCCHHHHHHHHhcC---CCEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEC-----hHHHHHHcCCC-C
Confidence 3565544 65555578888643 3666655 433333456777788888 788888874 25699999997 7
Q ss_pred CEEEEEeCCCCceeeecC----CCChhHHHHHHHhhc
Q 009206 332 PAIVFLKDPGVKPVVYYG----SFNNSRLSEVMEQNK 364 (540)
Q Consensus 332 Ptlv~fk~~~~~~~~y~G----~~~~~~l~~fi~~~~ 364 (540)
|+|++|+++++.++.|.| .++.+.|.+||..|.
T Consensus 87 ~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~ 123 (124)
T 2l4c_A 87 NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINS 123 (124)
T ss_dssp SCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHC
T ss_pred CeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhc
Confidence 999999998888888986 789999999999875
No 216
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.31 E-value=1.8e-06 Score=78.37 Aligned_cols=92 Identities=10% Similarity=0.027 Sum_probs=69.9
Q ss_pred CCCcEEEEEEecCCCC-ccCChHHHHHHHHHHhc-----ccceeeeeccchh-------------------------hhh
Q 009206 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~-----~~~v~~Vdc~~~~-------------------------~~~ 200 (540)
.++++||.||++||++ |+...|.++++.++++. .+.+..|+++.++ ...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 4689999999999998 99999999999999963 4577888877311 112
Q ss_pred HHHHhCCCCccceeeeee---------------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 201 ~l~~~~~~~~~~~V~~~P---------------tl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
.+++.|+ |.+.| +++++ ++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 105 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYR------VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF----TDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSC------CCCEECCCCSSCCCCEECCCEEEEECTTSCE----EEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhC------eEEEecCCCCCCCeEEeccceEEEECCCCeE----EEEECCCCCHHHHHHHHHHHH
Confidence 3667777 77777 66555 66753 456789999999999988763
No 217
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.31 E-value=8.1e-07 Score=81.18 Aligned_cols=96 Identities=8% Similarity=-0.075 Sum_probs=65.3
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeecc--------chhhhhHHH-HhCCCC------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG--------DIRLATHLA-ERKPIG------------ 209 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~--------~~~~~~~l~-~~~~~~------------ 209 (540)
.+++++|.||++||+.|+ ..|.+.++.+++++. +.|..|+++ ........+ +++++.
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468999999999999999 999999999999876 488888874 111222233 322110
Q ss_pred -----------ccceeeeee------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 210 -----------QIFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 210 -----------~~~~V~~~P------tl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+.|.+.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV----YERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 124588999 65555 67753 45677888888888888776
No 218
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.30 E-value=1e-06 Score=81.47 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=70.2
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHHHh-CCCC------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIG------------ 209 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~~~-~~~~------------ 209 (540)
.++++||.||++||+.|+...|.++++++++++. +.|..|++++ .......+++ +++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4689999999999999999999999999999876 5888898862 2233344554 3211
Q ss_pred --c---cceeeeee--------EEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 210 --Q---IFFRRGLP--------SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 210 --~---~~~V~~~P--------tl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
. .|.+.++| ++++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV----VGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE----EEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 0 13367889 4555567753 45678888899988887654
No 219
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.62 E-value=8.9e-08 Score=86.23 Aligned_cols=95 Identities=8% Similarity=-0.040 Sum_probs=62.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHH-HHHHHh-c-ccceeeeeccchhh-hhHHHHhCCC------------Cccce--
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKT-IAALLE-G-IANTGMVELGDIRL-ATHLAERKPI------------GQIFF-- 213 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~-~A~~l~-~-~~~v~~Vdc~~~~~-~~~l~~~~~~------------~~~~~-- 213 (540)
.+++++|.||++||++|+...|.+.+ +...+. + .+.+..|++++.+. .....+++++ .+.|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46899999999999999999999998 888776 3 34888888885532 2223333221 11222
Q ss_pred eeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHH
Q 009206 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 214 V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~ 251 (540)
+.++|+++++ ++|.. ...+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i----~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKI----VKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 4679999988 56643 233444 455555555543
No 220
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.28 E-value=1e-06 Score=79.80 Aligned_cols=97 Identities=8% Similarity=-0.058 Sum_probs=70.4
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHHH-hCCCCc-----------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIGQ----------- 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~~-~~~~~~----------- 210 (540)
.++++||.||++||++|+...|.++++++++++. +.|..|+++. .......++ ++++.=
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 5789999999999999999999999999999876 5888898852 223333455 443210
Q ss_pred ----c--------cee--eeee---EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 211 ----I--------FFR--RGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 211 ----~--------~~V--~~~P---tl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
. |.+ .++| +.+++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV----VDRYYPTTSPLSLERDIKQL 166 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCE----EEeeCCCCCHHHHHHHHHHH
Confidence 0 134 6789 65555 66753 45678888888888888776
No 221
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.27 E-value=2.1e-06 Score=79.83 Aligned_cols=98 Identities=10% Similarity=0.035 Sum_probs=69.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHHH-hCCCC------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIG------------ 209 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~~-~~~~~------------ 209 (540)
.++++||.||+.||+.|+...|.+.++.+++++. +.|..|+++. .......++ ++++.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 5689999999999999999999999999999876 4888888752 222222222 22211
Q ss_pred --------------ccceeeeee---EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 210 --------------QIFFRRGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 210 --------------~~~~V~~~P---tl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+.|.+.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.+
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i----~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHHC
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE----EEEECCCCCHHHHHHHHHHHH
Confidence 122345667 76666 66653 456789899999999988763
No 222
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.27 E-value=7.2e-07 Score=78.78 Aligned_cols=69 Identities=6% Similarity=-0.094 Sum_probs=54.3
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh-----------------------hhHHHHhCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-----------------------ATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~-----------------------~~~l~~~~~ 207 (540)
.+++++|.||++||++|+...|.+.++.+++++. +.|..|+++.++. ...+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4689999999999999999999999999998754 4788888774321 123556666
Q ss_pred CCccceeeeeeEEEEeC-CC
Q 009206 208 IGQIFFRRGLPSLVAFP-PG 226 (540)
Q Consensus 208 ~~~~~~V~~~Ptl~~f~-~g 226 (540)
|.++|+.+++. +|
T Consensus 111 ------v~~~P~~~lid~~G 124 (143)
T 4fo5_A 111 ------LRKGFKNFLINDEG 124 (143)
T ss_dssp ------GGGCCCEEEECTTS
T ss_pred ------CCCCCcEEEECCCC
Confidence 99999988886 45
No 223
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.27 E-value=8.3e-07 Score=71.04 Aligned_cols=79 Identities=10% Similarity=0.173 Sum_probs=57.8
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhh-hhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCccc
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~-~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~ 235 (540)
++.|+++||++|+++.|.+++++.+..+ ..+..+|+++++. ...++++++.+ +.++|++ |.+|..
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~----~~~vP~i--~~~g~~------- 68 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKP----VETVPQI--FVDQQH------- 68 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCC----SCCSCEE--EETTEE-------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCC----CceeCeE--EECCEE-------
Confidence 6789999999999999999999987654 5788899875531 12477777644 7899998 446632
Q ss_pred ccCCCCHHHHHHHHHHh
Q 009206 236 FEGELSVDAVTDWFATA 252 (540)
Q Consensus 236 y~G~~~~~~i~~fi~~~ 252 (540)
..| .++|.+++.+.
T Consensus 69 i~~---~~~l~~~~~~~ 82 (85)
T 1ego_A 69 IGG---YTDFAAWVKEN 82 (85)
T ss_dssp EES---SHHHHHHHHHH
T ss_pred EEC---HHHHHHHHHHh
Confidence 123 26888887664
No 224
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.26 E-value=1.4e-06 Score=83.28 Aligned_cols=89 Identities=10% Similarity=0.110 Sum_probs=67.1
Q ss_pred CC-cEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch--------h------------------hhhHHHH
Q 009206 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------R------------------LATHLAE 204 (540)
Q Consensus 153 ~~-~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~--------~------------------~~~~l~~ 204 (540)
++ ++||.||++||+.|+...|.++++++++++. +.|..|++++. . ....+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 45 5999999999999999999999999999876 58888988411 0 1123677
Q ss_pred hCCCCccceeeeeeEEEEe-CCCCCCCCCcccccC-----------CCCHHHHHHHHHHhh
Q 009206 205 RKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEG-----------ELSVDAVTDWFATAI 253 (540)
Q Consensus 205 ~~~~~~~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G-----------~~~~~~i~~fi~~~v 253 (540)
.|+ |.++|+++++ ++|. ..|.| ..+.+.|.+.+.+.+
T Consensus 138 ~~~------v~~~P~~~liD~~G~------i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll 186 (218)
T 3u5r_E 138 AYG------AACTPDFFLYDRERR------LVYHGQFDDARPGNGKDVTGADLRAAVDAVL 186 (218)
T ss_dssp HHT------CCEESEEEEECTTCB------EEEEECSSSCCTTSCCCCCCHHHHHHHHHHH
T ss_pred HcC------CCCCCeEEEECCCCc------EEEeccccccccccccccCHHHHHHHHHHHH
Confidence 777 9999999999 4553 33543 345678888877764
No 225
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.23 E-value=3.8e-07 Score=76.27 Aligned_cols=79 Identities=11% Similarity=0.072 Sum_probs=59.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc--chhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--DIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~--~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~ 229 (540)
...+.++.|+++||++|+++.|.+++++.. +.+..||.+ ++ ..++++++ . ++|++ |.+|..
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~~----i~~~~vdi~~~~~---~el~~~~g-~------~vP~l--~~~g~~- 76 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKDR----FILQEVDITLPEN---STWYERYK-F------DIPVF--HLNGQF- 76 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSSS----SEEEEEETTSSTT---HHHHHHSS-S------SCSEE--EESSSE-
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhhC----CeEEEEECCCcch---HHHHHHHC-C------CCCEE--EECCEE-
Confidence 456789999999999999999998876532 578999998 44 34778776 4 89986 456642
Q ss_pred CCCcccccCCCCHHHHHHHHHHh
Q 009206 230 SDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 230 ~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
. ..|..+.+.|.+++.+.
T Consensus 77 ----~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 77 ----L-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp ----E-EESSCCHHHHHHHHHSS
T ss_pred ----E-EecCCCHHHHHHHHHHH
Confidence 2 34668899999998765
No 226
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.19 E-value=1.9e-06 Score=77.89 Aligned_cols=97 Identities=8% Similarity=-0.059 Sum_probs=67.0
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHH-HHhCCCCc-----------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHL-AERKPIGQ----------- 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l-~~~~~~~~----------- 210 (540)
.+++++|.||++||++|+...|.++++.+++.+. +.|..|++++ ....... .+++++.=
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4689999999999999999999999999999875 4888898852 1222333 24433210
Q ss_pred ----cc--------e-----eeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 211 ----IF--------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 211 ----~~--------~-----V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.| . |.++|+.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP----VKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCE----EEEcCCCCCHHHHHHHHHHH
Confidence 11 2 3345776666 56643 45677888888888887765
No 227
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.18 E-value=1.3e-06 Score=83.57 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=59.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceee--e--------------------------------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGM--V-------------------------------------- 191 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~--V-------------------------------------- 191 (540)
+.+++++.|+++||++|+++.|.++++++. + +.+.- +
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~-v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G-ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 567899999999999999999999998753 1 11110 0
Q ss_pred eccc-hhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 192 ELGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 192 dc~~-~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
.|.. -.....+++++| |+|+||+ +|.+|. .+.|..+.+.|.+++.+.
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gtPt~-v~~dG~-------~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLG------VSGTPAV-VLSNGT-------LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHT------CCSSSEE-ECTTSC-------EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCccCEE-EEcCCe-------EecCCCCHHHHHHHHHHh
Confidence 1221 112234788888 9999999 566662 457989999999998765
No 228
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.14 E-value=1.9e-06 Score=79.72 Aligned_cols=95 Identities=5% Similarity=-0.097 Sum_probs=65.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHHHhCCCCc------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPIGQ------------ 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~~~~~~~~------------ 210 (540)
.++++||.||++||+.|+...|.++++.+++++. +.|..|+++. .......++++++.=
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4689999999999999999999999999999875 4888888752 223333455543210
Q ss_pred ---cc----------e-----eeeeeEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHH
Q 009206 211 ---IF----------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 211 ---~~----------~-----V~~~Ptl~~f-~~g~~~~~~~~~y~G~~~~~~i~~fi~ 250 (540)
.| . |+.+|+++++ ++|.. ...|.|..+.+.|.+++.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV----VKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE----EEEECTTSCTHHHHTTSG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHH
Confidence 01 1 3345887777 56643 355778877777776654
No 229
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.14 E-value=3.7e-06 Score=77.93 Aligned_cols=91 Identities=12% Similarity=0.045 Sum_probs=68.6
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh----------------------hHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA----------------------THLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~----------------------~~l~~~~~ 207 (540)
.+++++|.|| ++||++|+...|.+.+++++++.. +.+..|+++..... ..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3589999999 999999999999999999999864 47888887742211 23555666
Q ss_pred CCccceee------eeeEEEEe-CCCCCCCCCcccccCC----CCHHHHHHHHHHh
Q 009206 208 IGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (540)
Q Consensus 208 ~~~~~~V~------~~Ptl~~f-~~g~~~~~~~~~y~G~----~~~~~i~~fi~~~ 252 (540)
|. ++|+++++ ++|.. ...+.|. ++.+.|.+.+.+.
T Consensus 110 ------v~~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 110 ------VLNEETGLADRGTFIIDPDGVI----QAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp ------CEETTTTEECEEEEEECTTSBE----EEEEEECTTSCCCTTHHHHHHHHH
T ss_pred ------CCcCCCCceeeEEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 99999999 56643 3344554 3788888888765
No 230
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.13 E-value=4.1e-06 Score=78.48 Aligned_cols=91 Identities=9% Similarity=0.029 Sum_probs=68.3
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh-------------------------hHHHH
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~-------------------------~~l~~ 204 (540)
.+++++|.|| ++||++|+...|.+.++.+++.+. +.|..|+++..... ..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4679999999 999999999999999999999765 47888887742211 23556
Q ss_pred hCCCCccceee-----eeeEEEEe-CCCCCCCCCcccccCCC----CHHHHHHHHHHh
Q 009206 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFATA 252 (540)
Q Consensus 205 ~~~~~~~~~V~-----~~Ptl~~f-~~g~~~~~~~~~y~G~~----~~~~i~~fi~~~ 252 (540)
.|+ |. ++|+++++ ++|.. ...+.|.. +.+.|.+.+.+.
T Consensus 112 ~~~------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYD------VLFEEAIALRGAFLIDKNMKV----RHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTT------CEETTTEECEEEEEEETTTEE----EEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhC------CcccCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 666 88 99999888 56643 34455543 688888888765
No 231
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.08 E-value=2.9e-06 Score=77.70 Aligned_cols=33 Identities=3% Similarity=0.094 Sum_probs=29.4
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG 184 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~ 184 (540)
+.++.+++|+++||+||+++.|..+++.++...
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN 53 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC
Confidence 567899999999999999999999999887644
No 232
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.05 E-value=3.4e-06 Score=76.18 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=63.3
Q ss_pred CCCc-EEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh------------------hHHHHhCCCCc
Q 009206 152 DSKP-WLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA------------------THLAERKPIGQ 210 (540)
Q Consensus 152 ~~~~-~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~------------------~~l~~~~~~~~ 210 (540)
.+++ ++|.|| +.||++|....|.+.++.+++++. +.|..|+++..... ..+++.|+
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG--- 103 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT---
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcC---
Confidence 3555 999999 999999999999999999999876 47888888733222 23556666
Q ss_pred cceeee----eeEEEEeC-CCCCCCCCcccccCCC----CHHHHHHHHHH
Q 009206 211 IFFRRG----LPSLVAFP-PGCKSSDCMTRFEGEL----SVDAVTDWFAT 251 (540)
Q Consensus 211 ~~~V~~----~Ptl~~f~-~g~~~~~~~~~y~G~~----~~~~i~~fi~~ 251 (540)
|.+ +|+.+++- +|.. ...|.|.. ..+.+++.+.+
T Consensus 104 ---v~~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 104 ---AKGFILPARITFVIDKKGII----RHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp ---CCCSSSCCCEEEEECTTSBE----EEEEECSSCTTHHHHHHHHHHHH
T ss_pred ---CCCcCcccceEEEECCCCEE----EEEEecCCCCCcCHHHHHHHHHH
Confidence 888 99988884 5643 34566633 34444444433
No 233
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.05 E-value=6.2e-06 Score=77.07 Aligned_cols=91 Identities=12% Similarity=0.005 Sum_probs=68.2
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhh----------------------HHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLAT----------------------HLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~----------------------~l~~~~~ 207 (540)
.+++++|.|| +.||++|+...|.+.++.++++.. +.|..|+++...... .+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3679999999 999999999999999999999864 578888877432222 2444444
Q ss_pred CCccceee-----eeeEEEEeC-CCCCCCCCcccccCC----CCHHHHHHHHHHh
Q 009206 208 IGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (540)
Q Consensus 208 ~~~~~~V~-----~~Ptl~~f~-~g~~~~~~~~~y~G~----~~~~~i~~fi~~~ 252 (540)
|. ++|+++++- +|.. ...+.|. ++.+.|.+.+.+.
T Consensus 124 ------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 124 ------VLNADGVADRVTFIVDPNNEI----QFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp ------CBCTTSSBCEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred ------CcccCCCccceEEEEcCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 999999995 5542 3344454 3789999988776
No 234
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.02 E-value=4.7e-06 Score=74.83 Aligned_cols=88 Identities=11% Similarity=0.014 Sum_probs=61.7
Q ss_pred CcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh--------------------hhHHHHhCCCCcc
Q 009206 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQI 211 (540)
Q Consensus 154 ~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~--------------------~~~l~~~~~~~~~ 211 (540)
++++|.|| ++||++|+...|.+.++++++++. +.+..|+++.... ...+++.|+
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---- 112 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG---- 112 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT----
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC----
Confidence 48999998 999999999999999999988754 4788888764221 233667777
Q ss_pred ceee----eee--EEEEe-CCCCCCCCCcccccCCC----CHHHHHHHHHH
Q 009206 212 FFRR----GLP--SLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFAT 251 (540)
Q Consensus 212 ~~V~----~~P--tl~~f-~~g~~~~~~~~~y~G~~----~~~~i~~fi~~ 251 (540)
|. ++| +.+++ ++|.. ...+.|.. ..+.+++.+.+
T Consensus 113 --v~~~~~~~p~~~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 113 --VFNEQAGIANRGTFVVDRSGII----RFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp --CEETTTTEECSEEEEECTTSBE----EEEEECCTTCCCCHHHHHHHHHH
T ss_pred --CccccCCCeeeeEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHH
Confidence 88 999 55555 66643 34445543 45666665543
No 235
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.02 E-value=7.1e-06 Score=75.61 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=67.2
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHHHh-CCCCccc---------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIGQIF--------- 212 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~~~-~~~~~~~--------- 212 (540)
.++++||.||++||+.|+...|.+.++.+++++. +.|..|+++. .......+++ +++.-+.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 5689999999999999999999999999999876 4788887652 2333445666 4432111
Q ss_pred ------e-----eeeeeE-----EEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 ------F-----RRGLPS-----LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ------~-----V~~~Pt-----l~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
. +.+.|+ +++-++|.. ...|.|..+.+.|...+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQV----VKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCE----EEEECTTCCGGGTHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 0 012564 566677753 45677888877777776655
No 236
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.02 E-value=3.8e-06 Score=79.98 Aligned_cols=83 Identities=17% Similarity=0.183 Sum_probs=58.7
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhccccee--ee--------------------------------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTG--MV-------------------------------------- 191 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~--~V-------------------------------------- 191 (540)
+.++.++.|+++||++|+++.|..+++.+. + +.+. .+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 567899999999999999999999987652 2 1111 00
Q ss_pred eccc-hhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 009206 192 ELGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (540)
Q Consensus 192 dc~~-~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~ 251 (540)
.|.. -.....++++++ |+|.||+++ .+|. .+.|..+.+.|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gTPt~vi-~nG~-------~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFG------VRGTPSIVT-STGE-------LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHT------CCSSCEEEC-TTSC-------CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCcCCEEEE-eCCE-------EecCCCCHHHHHHHHHh
Confidence 1210 012234778888 999999987 6663 45788899999998865
No 237
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.00 E-value=6e-06 Score=76.49 Aligned_cols=57 Identities=4% Similarity=-0.166 Sum_probs=45.1
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccc--------hhhhhHHHHhCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPI 208 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~--------~~~~~~l~~~~~~ 208 (540)
.+++++|.||++||+.|+...|.++++.+++++. +.|..|+++. .......++++++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~ 113 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNV 113 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999876 4888888762 1233446666653
No 238
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.98 E-value=9.9e-06 Score=76.86 Aligned_cols=43 Identities=9% Similarity=-0.188 Sum_probs=38.7
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeecc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~ 194 (540)
.++++||.|||.||+.|++..|.++++.+++++. +.|..|+|+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4689999999999999999999999999999876 488889885
No 239
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=97.96 E-value=6.9e-06 Score=71.46 Aligned_cols=95 Identities=6% Similarity=-0.015 Sum_probs=77.5
Q ss_pred eEEeC-CCCccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeee
Q 009206 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (540)
Q Consensus 138 V~~lt-~~~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~ 216 (540)
+..|+ .++++.++.++++++|-|+++||+.| .+.|.++|+.+ ....+|.++-. . ++++++ +.
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~~---~---v~~~~~------v~- 85 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTDS---E---VLTHYN------IT- 85 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECCH---H---HHHHTT------CC-
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEChH---H---HHHHcC------CC-
Confidence 34464 46788888889999999999999999 78999999999 66789888653 3 778888 77
Q ss_pred eeEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 217 LPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 217 ~Ptl~~f~~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|++++|+++.. ....|.| ..+.++|.+||...
T Consensus 86 ~~~vvlfkkfde---~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 86 GNTICLFRLVDN---EQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SSCEEEEETTTT---EEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEcCCC---CceeecCcccCCCCHHHHHHHHHHh
Confidence 899999998642 2467886 78999999999865
No 240
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.93 E-value=1.4e-05 Score=74.78 Aligned_cols=91 Identities=14% Similarity=0.020 Sum_probs=67.4
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh-------------------------hHHHH
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~-------------------------~~l~~ 204 (540)
.+++++|.|| +.||++|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 4678999999 999999999999999999999764 48888888743211 23555
Q ss_pred hCCCCccceee------eeeEEEEe-CCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 205 RKPIGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 205 ~~~~~~~~~V~------~~Ptl~~f-~~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|+ +. ++|+++++ ++|.. ...+.| .++.+.+.+.+.+.
T Consensus 113 ~~g------v~~~~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYG------VLKTDEGIAYRGLFIIDGKGVL----RQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcC------CccCCCCceeeEEEEECCCCcE----EEEEeCCCCCCCCHHHHHHHHHhc
Confidence 665 87 89998888 45542 233334 46788999988765
No 241
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.89 E-value=1.5e-06 Score=82.04 Aligned_cols=54 Identities=11% Similarity=0.141 Sum_probs=44.3
Q ss_pred CCCccccc--cCCCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeeccch
Q 009206 143 SEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI 196 (540)
Q Consensus 143 ~~~F~~~v--~~~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~~~ 196 (540)
..+|..+. ...++++|+||++||+||+++.|.| +++++.+.+.+.|.+++.+.+
T Consensus 101 g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 101 GKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 34555443 2467999999999999999999999 999999987778999998743
No 242
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.88 E-value=5.4e-05 Score=73.48 Aligned_cols=98 Identities=15% Similarity=0.216 Sum_probs=72.2
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEe--CCCCCCcHHHHHHHHhhc--cCceEEEEEeec--cc-cHHHHHHcCCC--CC
Q 009206 262 YTKESMGKNFLAKTGPHKVKVI-FFS--KTGERASPFVRQISRNYW--AYASFAFVLWRE--EE-SSIWWNTFEVE--SA 331 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv-~f~--~~~~~~~~~~~~~A~~~~--~~~~f~~v~~~~--~~-~~~l~~~f~V~--~~ 331 (540)
+++.+ +++.+... ++.+| |+. +-|. ..|.|..+|..+. ..+.|+.|+..+ |+ ...++++|+|. ++
T Consensus 10 Lt~~n-F~~~i~~~---~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~ 84 (240)
T 2qc7_A 10 LDTVT-FYKVIPKS---KFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESY 84 (240)
T ss_dssp CCTTH-HHHHGGGC---SEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGC
T ss_pred CCHHH-HHHHHcCC---CCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCC
Confidence 45444 45555432 34445 555 5555 7788888998885 357778877544 43 37899999999 99
Q ss_pred CEEEEEeCCC-CceeeecCCCChhHHHHHHHhhc
Q 009206 332 PAIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 332 Ptlv~fk~~~-~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
|||++|+++. ..+..|.|..+.+.|.+||..+.
T Consensus 85 PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 85 PVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp SEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9999999876 46778999999999999999874
No 243
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.86 E-value=6.4e-05 Score=68.13 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=68.1
Q ss_pred CCCcEEEEEEecCCC-CccCChHHHHHHHHHHhcc---cceeeeeccc----hhhhhHHHHhCCCCc-------------
Q 009206 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELGD----IRLATHLAERKPIGQ------------- 210 (540)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~l~p~~~~~A~~l~~~---~~v~~Vdc~~----~~~~~~l~~~~~~~~------------- 210 (540)
.+++++|.||+.||+ .|....|.+.++.+.++.. +.|..|+++. .......++++++.-
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 468999999999999 9999999999999998764 5788888862 122333445544321
Q ss_pred ------------------cceeeeeeEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 009206 211 ------------------IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (540)
Q Consensus 211 ------------------~~~V~~~Ptl~~f-~~g~~~~~~~~~y~G~~--~~~~i~~fi~~~ 252 (540)
.|.+.+.|+++++ ++|.. ...|.|.. +.+.|.+.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV----LKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE----EEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE----EEEEcCCCCCCHHHHHHHHHHH
Confidence 1235678986666 55543 34566765 578888888765
No 244
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.84 E-value=4.1e-06 Score=66.38 Aligned_cols=71 Identities=11% Similarity=0.094 Sum_probs=48.3
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccc
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y 236 (540)
++.|+++||++|+++.+.+++. ...+..+|+++++.......+++ +.++|++ |.+|. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g------~~~vP~~--~~~g~-------~- 60 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQG------FRQLPVV--IAGDL-------S- 60 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CCSSCEE--EETTE-------E-
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhC------CCccCEE--EECCE-------E-
Confidence 5779999999999988887753 14678899986654333334567 8899998 34552 1
Q ss_pred cCCCCHHHHHHHH
Q 009206 237 EGELSVDAVTDWF 249 (540)
Q Consensus 237 ~G~~~~~~i~~fi 249 (540)
-|..+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (81)
T 1h75_A 61 WSGFRPDMINRLH 73 (81)
T ss_dssp EESCCHHHHGGGS
T ss_pred EecCCHHHHHHHH
Confidence 2345566665554
No 245
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.82 E-value=4.9e-05 Score=63.81 Aligned_cols=96 Identities=22% Similarity=0.222 Sum_probs=64.3
Q ss_pred ccchhhhhhhhhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEe
Q 009206 263 TKESMGKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK 338 (540)
Q Consensus 263 ~~~~~~~~fl~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk 338 (540)
++.+.+++.+... .+++.+|.| .+ .|....|.+..++..+. ...|+.|+.. +.++++++|+|.+.||+++|+
T Consensus 6 ~~~~~f~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d--~~~~l~~~~~V~~~PT~~~~~ 81 (105)
T 3zzx_A 6 KDQEDFTKQLNEA-GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVD--ECEDIAQDNQIACMPTFLFMK 81 (105)
T ss_dssp CSHHHHHHHHHHT-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETT--TCHHHHHHTTCCBSSEEEEEE
T ss_pred CCHHHHHHHHHhc-CCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecc--cCHHHHHHcCCCeecEEEEEE
Confidence 3333356666543 346766655 33 23345677777887764 4566666532 347899999999999999998
Q ss_pred CCCCceeeecCCCChhHHHHHHHhhc
Q 009206 339 DPGVKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 339 ~~~~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
++. ....+.| .+.+.|.+||++|+
T Consensus 82 ~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 82 NGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp TTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred CCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 653 3334677 48899999999875
No 246
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.82 E-value=3.6e-05 Score=71.53 Aligned_cols=91 Identities=14% Similarity=0.071 Sum_probs=66.3
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh-------------------------hHHHH
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~-------------------------~~l~~ 204 (540)
.+++++|.|| +.||++|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4679999999 999999999999999999999754 47778877642221 23555
Q ss_pred hCCCCccceee-----eeeEEEEe-CCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 205 ~~~~~~~~~V~-----~~Ptl~~f-~~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|+ |. ++|+++++ ++|.. ...+.| .++.+.+.+.+.+.
T Consensus 110 ~~g------v~~~~g~~~P~~~liD~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYD------VLFNESVALRAFVLIDKQGVV----QHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTT------CEETTTEECCEEEEECTTSBE----EEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhC------CcCcCCceeeEEEEEcCCCEE----EEEEeCCCCCCCCHHHHHHHHHHH
Confidence 555 88 89999999 55642 223334 34678888887654
No 247
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.80 E-value=4.2e-05 Score=73.05 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=67.0
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh-------------------------hHHHH
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~-------------------------~~l~~ 204 (540)
.+++++|.|| +.||+.|+...|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 3589999999 999999999999999999999754 47888887743211 23555
Q ss_pred hCCCCccceee------eeeEEEEe-CCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 205 RKPIGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 205 ~~~~~~~~~V~------~~Ptl~~f-~~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|+ |. ++|+++++ ++|.. ...+.| .++.++|.+.+...
T Consensus 135 ~yg------v~~~~~g~~~P~~~liD~~G~I----~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 135 DYG------VLLEGPGLALRGLFIIDPNGVI----KHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CeecCCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHh
Confidence 555 88 99999999 55542 222233 36778888888765
No 248
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=97.77 E-value=5.3e-05 Score=67.04 Aligned_cols=96 Identities=14% Similarity=0.141 Sum_probs=68.9
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe-CCCC-----CCcHHHHHHHHhhccC-ceEEEEEeeccccHHHHHHcCCCCCCEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGE-----RASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAI 334 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~-~~~~-----~~~~~~~~~A~~~~~~-~~f~~v~~~~~~~~~l~~~f~V~~~Ptl 334 (540)
+++.+ +++++.. ..+++|+|. +-+. ...|.+..+|.+|.+. +.|+.|++.+ .+.++.+|||.+.||+
T Consensus 22 ~t~~~-F~~~v~~---~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe--~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 22 VSESR-LDDWLTQ---APDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ--SEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CCHHH-HHHHHHT---CSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH--HHHHHHHHTCCSSSEE
T ss_pred CCHHH-HHHHHhC---CCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC--CHHHHHHcCCccCCEE
Confidence 44444 5666642 235566663 2122 2578999999999888 8888887533 4789999999999999
Q ss_pred EEEeCCCCceeeecCCCChhHHHHHHHhhc
Q 009206 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 335 v~fk~~~~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
++||++.. .....|..+.+.|.++|+++.
T Consensus 96 ilFk~G~~-v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 96 LVFTGGNY-RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEETTEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEE-EEEEecCCCHHHHHHHHHHHh
Confidence 99997653 234678888899999998753
No 249
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.77 E-value=2.2e-05 Score=60.82 Aligned_cols=71 Identities=10% Similarity=0.018 Sum_probs=49.6
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccc
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y 236 (540)
++.|+++||++|+++.+.+++. + ..+..+|.++++......++++ +.++|+++. +|. .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~di~~~~~~~~~~~~~~------~~~vP~l~~--~g~-------~- 60 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-----G-LAYNTVDISLDDEARDYVMALG------YVQAPVVEV--DGE-------H- 60 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHTT------CBCCCEEEE--TTE-------E-
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHcC------CCccCEEEE--CCe-------E-
Confidence 5779999999999988887754 1 4677888886554222224677 889999974 442 1
Q ss_pred cCCCCHHHHHHHH
Q 009206 237 EGELSVDAVTDWF 249 (540)
Q Consensus 237 ~G~~~~~~i~~fi 249 (540)
-|+.+.+.|.+++
T Consensus 61 ~~g~~~~~l~~~l 73 (75)
T 1r7h_A 61 WSGFRPERIKQLQ 73 (75)
T ss_dssp EESCCHHHHHHHH
T ss_pred EcCCCHHHHHHHH
Confidence 3445677887775
No 250
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.76 E-value=9.7e-05 Score=68.17 Aligned_cols=113 Identities=9% Similarity=0.075 Sum_probs=75.0
Q ss_pred cccchhhhhhhhhcCCCceEEEEEeC---------C--CCCCcHHHHHHHHhhc-----cCceEEEEEeeccccHHHHHH
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFSK---------T--GERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNT 325 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~~---------~--~~~~~~~~~~~A~~~~-----~~~~f~~v~~~~~~~~~l~~~ 325 (540)
+++.+ +++++... .+.++||.|.. + |....|.+..+|..|. +.+.|+.|+..+ .+.++++
T Consensus 23 lt~~n-F~~~v~~~-~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~--~~~la~~ 98 (178)
T 3ga4_A 23 VTADN-YPLLSRGV-PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE--VPQLVKD 98 (178)
T ss_dssp CCTTT-HHHHTTCC-TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT--CHHHHHH
T ss_pred CCHHH-HHHHHccc-CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc--CHHHHHH
Confidence 55555 56666532 23456666643 1 1224688888999887 677888887543 4789999
Q ss_pred cCCCCCCEEEEEeCCCCce-----------eee---cC-CCChhHHHHHHHhhccCCCccccccchhh
Q 009206 326 FEVESAPAIVFLKDPGVKP-----------VVY---YG-SFNNSRLSEVMEQNKLQELPQLRSVTSME 378 (540)
Q Consensus 326 f~V~~~Ptlv~fk~~~~~~-----------~~y---~G-~~~~~~l~~fi~~~~~~~lp~l~~~~~~~ 378 (540)
|||.+.|||++|++++... ..| .| .++.+.|.+||.+..-..++-..+.++-+
T Consensus 99 ~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 99 LKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNVQE 166 (178)
T ss_dssp TTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC---
T ss_pred cCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCChHH
Confidence 9999999999999876443 345 34 67889999999886544444334444433
No 251
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.76 E-value=7.7e-05 Score=64.22 Aligned_cols=97 Identities=15% Similarity=0.103 Sum_probs=65.5
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhc-----cCceEEEEEeeccccHHHHHHcCCCCCC
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNTFEVESAP 332 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~-----~~~~f~~v~~~~~~~~~l~~~f~V~~~P 332 (540)
++..+ +++.+.. .+++.+|.| .+ .|....|.+..+|..+. +.+.|+.|+.. ....++++|+|.++|
T Consensus 20 l~~~~-f~~~~~~--~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~P 94 (127)
T 3h79_A 20 LTDET-FDSIVMD--PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--KYPDVIERMRVSGFP 94 (127)
T ss_dssp CCTTT-HHHHHTC--TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--TCHHHHHHTTCCSSS
T ss_pred CChhh-HHHHHhC--CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--ccHhHHHhcCCccCC
Confidence 44444 4555532 234555555 33 23335677777776543 34556666532 246899999999999
Q ss_pred EEEEEeCCCC-ceeeecCCCChhHHHHHHHhh
Q 009206 333 AIVFLKDPGV-KPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 333 tlv~fk~~~~-~~~~y~G~~~~~~l~~fi~~~ 363 (540)
|+++|++++. .+..|.|..+.+.|.+||.++
T Consensus 95 t~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 95 TMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999998765 346799999999999999875
No 252
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.73 E-value=6.8e-05 Score=70.36 Aligned_cols=96 Identities=8% Similarity=-0.050 Sum_probs=65.0
Q ss_pred CCCcEEEEEEecCCCC-ccCChHHHHHHHHHHhc----ccceeeeeccch-------------------------hhhhH
Q 009206 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDI-------------------------RLATH 201 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~l~p~~~~~A~~l~~----~~~v~~Vdc~~~-------------------------~~~~~ 201 (540)
.++++||.||+.||++ |....|.+.++.+.+.. .+.|..|+++.. .....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4689999999999998 99999999998888863 347777877621 01234
Q ss_pred HHHhCCCCccceee-eee---------------E-EEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhhcCC
Q 009206 202 LAERKPIGQIFFRR-GLP---------------S-LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (540)
Q Consensus 202 l~~~~~~~~~~~V~-~~P---------------t-l~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v~~lp 257 (540)
+++.|+ |. +.| + +++-++|.. ...|.|..+.+.+.+.+.+.+..+.
T Consensus 120 ~~~~~g------v~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i----~~~~~g~~~~~~~~~~i~~~l~~l~ 182 (200)
T 2b7k_A 120 ACKKYR------VYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF----VDALGRNYDEKTGVDKIVEHVKSYV 182 (200)
T ss_dssp HHHHTT------C--------------CTTTCCCEEEECTTSCE----EEEECTTCCTTHHHHHHHHHHHHCC
T ss_pred HHHHcC------cEEeeccccCCCCCceeeecceEEEECCCCcE----EEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 666666 54 343 4 444466653 4556787888888888877654443
No 253
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.71 E-value=0.00021 Score=61.48 Aligned_cols=84 Identities=13% Similarity=0.133 Sum_probs=63.6
Q ss_pred CceEEEEE-e---CCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-S---KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~---~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| . ..|....|.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++++.....|.|..+.
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~ 112 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK--HQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTG 112 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSH
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCH
Confidence 34555555 3 344556788888888887767777776432 36799999999999999998877656678999899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+|+.+.
T Consensus 113 ~~l~~~l~~~ 122 (130)
T 2dml_A 113 EAIVDAALSA 122 (130)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 254
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.70 E-value=4.3e-05 Score=71.72 Aligned_cols=97 Identities=10% Similarity=0.024 Sum_probs=66.6
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhC-------C------------CCc
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------P------------IGQ 210 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~-------~------------~~~ 210 (540)
.+++++|.|| +.||+.|....|.+.+++++++.. +.|..|+++........++++ + +.+
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 3679999999 999999999999999999999764 478888887432222222222 0 011
Q ss_pred cceee------eeeEEEEe-CCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 211 IFFRR------GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~------~~Ptl~~f-~~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|.|. ++|+++++ ++|.. ...+.| .++.+.|.+.+.+.
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNL----RQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEE----EEEEeCCCCCCCCHHHHHHHHHHh
Confidence 23488 99999888 45542 222333 45778998888765
No 255
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.70 E-value=7.1e-05 Score=66.52 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=60.2
Q ss_pred cccchhhhhhhhhcCCCceEEEEEeC------CCCCCcHHHHHHHHhhccCce--EEEEEeeccccHHHHHHcCCCCCCE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFSK------TGERASPFVRQISRNYWAYAS--FAFVLWREEESSIWWNTFEVESAPA 333 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~~------~~~~~~~~~~~~A~~~~~~~~--f~~v~~~~~~~~~l~~~f~V~~~Pt 333 (540)
+++++ +++++.... ..+|+|.. .|....|.+..++.+| +.+. |+.|+... ...++++|+|.+.||
T Consensus 22 l~~~~-f~~~i~~~~---~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~--~~~la~~~~V~~iPT 94 (142)
T 2es7_A 22 VEAST-VDDWIKRVG---DGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ--SEAIGDRFNVRRFPA 94 (142)
T ss_dssp CCCC---------CC---SEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH--HHHHHHTTTCCSSSE
T ss_pred ccccc-HHHHHHhCC---CEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC--CHHHHHhcCCCcCCe
Confidence 44444 566665432 34555532 2334678888899988 7777 77775432 367999999999999
Q ss_pred EEEEeCCCCceeeecCCCChhHHHHHHHhhcc
Q 009206 334 IVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKL 365 (540)
Q Consensus 334 lv~fk~~~~~~~~y~G~~~~~~l~~fi~~~~~ 365 (540)
+++|+++ .....+.|..+.+.|.+||+....
T Consensus 95 ~~~fk~G-~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 95 TLVFTDG-KLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp EEEESCC-----CEESCCCHHHHHHHHHHHHC
T ss_pred EEEEeCC-EEEEEEeCCCCHHHHHHHHHHHhc
Confidence 9999754 334457898899999999987543
No 256
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.69 E-value=0.00021 Score=69.61 Aligned_cols=98 Identities=17% Similarity=0.105 Sum_probs=70.8
Q ss_pred cccchhhhhhhhhcCCCceEEEEE--eCCCCCCcHHHHHHHHhhc---cCceEEEEEeec---cccHHHHHHcCCC--CC
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF--SKTGERASPFVRQISRNYW---AYASFAFVLWRE---EESSIWWNTFEVE--SA 331 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f--~~~~~~~~~~~~~~A~~~~---~~~~f~~v~~~~---~~~~~l~~~f~V~--~~ 331 (540)
++..+ +++.+... ..++|.|+ .+-|. ..|.+..+|..|. +.+.|+.|+..+ .....++++|+|. ++
T Consensus 21 Lt~~n-F~~vi~~~--~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~ 96 (248)
T 2c0g_A 21 LDELS-FEKTVERF--PYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNF 96 (248)
T ss_dssp CCTTT-HHHHHTTS--SEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSC
T ss_pred CCHHH-HHHHHhcC--CCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCC
Confidence 45545 45555432 22444466 45554 7888999998884 367788887544 1146899999999 99
Q ss_pred CEEEEEeCCC-Cceeee--cCCCChhHHHHHHHhhc
Q 009206 332 PAIVFLKDPG-VKPVVY--YGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 332 Ptlv~fk~~~-~~~~~y--~G~~~~~~l~~fi~~~~ 364 (540)
|||++|+ +. ..+..| .|..+.+.|.+||+++.
T Consensus 97 PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 97 PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 9999999 65 357778 89999999999999874
No 257
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.69 E-value=0.00016 Score=63.68 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=69.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe-CCCCC-----CcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGER-----ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~-~~~~~-----~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv 335 (540)
+++.+ +++++... ..+++|.|. +-+.+ ..|.+..++.+|.+.+.|+.|++. +.+.++.+|+|.+.||++
T Consensus 20 vt~~~-F~~~v~~~--~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD--e~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 20 VDEAT-VDDFIAHS--GKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE--AERGLMARFGVAVCPSLA 94 (137)
T ss_dssp ECTTT-HHHHHHTS--SSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG--GHHHHHHHHTCCSSSEEE
T ss_pred cCHhH-HHHHHhcC--CCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC--CCHHHHHHcCCccCCEEE
Confidence 44444 45655432 235666664 33323 578899999999888888888743 347899999999999999
Q ss_pred EEeCCCCceeeecCCCChhHHHHHHHhhc
Q 009206 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 336 ~fk~~~~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
+||++.. .....|..+.+.|.++|+++.
T Consensus 95 lFkdG~~-v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERT-LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 9997643 234578889999999998753
No 258
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.66 E-value=7.4e-05 Score=65.31 Aligned_cols=106 Identities=11% Similarity=0.113 Sum_probs=70.1
Q ss_pred CCcccccccchhhhhhhhhcCCCceEEEEE-eCCCCC--CcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCC--
Q 009206 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTGER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES-- 330 (540)
Q Consensus 256 lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f-~~~~~~--~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~-- 330 (540)
+|.+..++..+ ++++++. ..++++.| .+.+.+ ..|.++.+|.+|++++.|+.++..+ .+.++++|||.+
T Consensus 5 ~plv~~~t~~~-f~~~~~~---~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~--~~~~a~~~gi~~~~ 78 (133)
T 2djk_A 5 SPLIGEIGPET-YSDYMSA---GIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA--FGAHAGNLNLKTDK 78 (133)
T ss_dssp CCCSEECCHHH-HHHHHHT---TSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT--TGGGTTTTTCCSSS
T ss_pred cCceeccChHH-HHHHhcC---CCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH--hHHHHHHcCCCccc
Confidence 34443445444 3444432 23445544 332222 3577788999999889999987543 356899999998
Q ss_pred CCEEEEEeC-CCCceeeec--CCCChhHHHHHHHhhccCCC
Q 009206 331 APAIVFLKD-PGVKPVVYY--GSFNNSRLSEVMEQNKLQEL 368 (540)
Q Consensus 331 ~Ptlv~fk~-~~~~~~~y~--G~~~~~~l~~fi~~~~~~~l 368 (540)
.||+++|+. ++.. ..+. |.++.+.|.+|++...-..+
T Consensus 79 iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 79 FPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp SSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHHcCCc
Confidence 999999986 3333 2333 88999999999987654433
No 259
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.66 E-value=3.4e-05 Score=71.90 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=35.2
Q ss_pred cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeec
Q 009206 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (540)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc 193 (540)
...++++|.|+++||++|+++.|.++++++.+.+.+.+..++.
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEec
Confidence 3578899999999999999999999999988765444555544
No 260
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.66 E-value=3.2e-05 Score=71.92 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=30.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhccc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA 186 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~ 186 (540)
+.++.+|+|+++||+||+++.|.+.++.+.+.+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v 58 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADV 58 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTE
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCe
Confidence 57889999999999999999999999988876543
No 261
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.65 E-value=0.00023 Score=59.78 Aligned_cols=86 Identities=17% Similarity=0.199 Sum_probs=61.9
Q ss_pred CceEEEEE-eC---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+ .|....+.+..++..+.+.+.|+.++... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 17 ~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 93 (112)
T 2voc_A 17 EGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE--NQETAGKYGVMSIPTLLVLKD-GEVVETSVGFKPK 93 (112)
T ss_dssp SSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT--CCSHHHHTTCCSBSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCCcccEEEEEeC-CEEEEEEeCCCCH
Confidence 34556655 32 23445677777888887677777776433 356999999999999999964 4444457899999
Q ss_pred hHHHHHHHhhccC
Q 009206 354 SRLSEVMEQNKLQ 366 (540)
Q Consensus 354 ~~l~~fi~~~~~~ 366 (540)
+.|.+|++.+.-+
T Consensus 94 ~~l~~~l~~~~~~ 106 (112)
T 2voc_A 94 EALQELVNKHLLE 106 (112)
T ss_dssp HHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999886543
No 262
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.54 E-value=5.9e-05 Score=72.11 Aligned_cols=96 Identities=10% Similarity=0.039 Sum_probs=65.0
Q ss_pred CCCcEEEEEEe-cCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 009206 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (540)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (540)
.++++||.||+ .||++|....|.+.++.+++++. +.|..|+++........++++ ++ .+
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 46899999996 99999999999999999999865 488888887533222222221 00 12
Q ss_pred cceee------eeeEEEEeC-CCCCCCCCcccccCC----CCHHHHHHHHHH
Q 009206 211 IFFRR------GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFAT 251 (540)
Q Consensus 211 ~~~V~------~~Ptl~~f~-~g~~~~~~~~~y~G~----~~~~~i~~fi~~ 251 (540)
.|.|. ++|+.+++- +|.. ...+.|. +..+++++.+..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I----~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGIL----RQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEE----EEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHH
Confidence 33487 899999884 5532 2233332 457777777754
No 263
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.53 E-value=1.5e-05 Score=66.56 Aligned_cols=67 Identities=12% Similarity=0.141 Sum_probs=45.7
Q ss_pred cccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh----hhhHHHHhCCCCccceeeeeeEEEE
Q 009206 147 PSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVA 222 (540)
Q Consensus 147 ~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~----~~~~l~~~~~~~~~~~V~~~Ptl~~ 222 (540)
++++.++. ++.|+++||++|+++.|.+++++.... .+..+|++.+. ....+++.++ +.++|++
T Consensus 6 ~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~i-- 72 (105)
T 1kte_A 6 NSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTG------ARTVPRV-- 72 (105)
T ss_dssp HHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHS------CCCSCEE--
T ss_pred HhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhC------CCCcCeE--
Confidence 44454443 677999999999999998887643321 26777877542 1234777777 8899998
Q ss_pred eCCC
Q 009206 223 FPPG 226 (540)
Q Consensus 223 f~~g 226 (540)
|.+|
T Consensus 73 ~~~g 76 (105)
T 1kte_A 73 FIGK 76 (105)
T ss_dssp EETT
T ss_pred EECC
Confidence 4455
No 264
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.52 E-value=7e-05 Score=72.65 Aligned_cols=88 Identities=9% Similarity=0.006 Sum_probs=58.8
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeee---------------------------------------
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vd--------------------------------------- 192 (540)
+.+..++.|+.+||++|+++.|..+++.+. +.+.|..+.
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 456789999999999999999998877653 322222111
Q ss_pred -------cc-chhhhhHHHHhCCCCccceeeeeeEEEEeCC-CCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 193 -------LG-DIRLATHLAERKPIGQIFFRRGLPSLVAFPP-GCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 193 -------c~-~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~-g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|. .-.....+++++| |+|+||+++... |. +....|..+.+.|.+++.+.
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~g------v~gtPt~vi~~~~G~-----~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLG------ANVTPAIYYMSKENT-----LQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHT------CCSSCEEEEEETTTE-----EEEEESSCCHHHHHHHTTC-
T ss_pred cccCCHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCCCC-----EEEecCCCCHHHHHHHHHHH
Confidence 10 0011123667777 999999999863 42 23467989999988887543
No 265
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.50 E-value=0.00081 Score=64.74 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=41.9
Q ss_pred CCCcEEEEEE-ecCCCCcc-CChHHHHHHHHHHhcc-c-ceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l~~~-~-~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.|| +.||+.|. .-.|.+.+++++++.. + .|..|+.+........+++++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 91 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEK 91 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcC
Confidence 4578999999 99999999 9999999999988653 4 577777764433334455443
No 266
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.48 E-value=0.00037 Score=59.93 Aligned_cols=83 Identities=16% Similarity=0.135 Sum_probs=59.7
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhc----cCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecC
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG 349 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~----~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G 349 (540)
+++.+|.|. +. |....|.+..++..+. +.+.|+.|.... ...++++|+|.+.|++++|++ +.....|.|
T Consensus 25 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-g~~~~~~~G 101 (133)
T 1x5d_A 25 EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPTIKIFQK-GESPVDYDG 101 (133)
T ss_dssp SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSEEEEEET-TEEEEEECS
T ss_pred CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCeEEEEeC-CCceEEecC
Confidence 346566553 32 3344667777887776 566676665432 357999999999999999987 444556889
Q ss_pred CCChhHHHHHHHhh
Q 009206 350 SFNNSRLSEVMEQN 363 (540)
Q Consensus 350 ~~~~~~l~~fi~~~ 363 (540)
..+.+.|.+|+.+.
T Consensus 102 ~~~~~~l~~~l~~~ 115 (133)
T 1x5d_A 102 GRTRSDIVSRALDL 115 (133)
T ss_dssp CCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 98999999999874
No 267
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.48 E-value=0.00026 Score=58.39 Aligned_cols=95 Identities=14% Similarity=0.193 Sum_probs=65.4
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
++.++ +++.+.. +++.+|.|. +.| ....+.+..++..+.+...|+.+... ....++++|+|.+.|++++|
T Consensus 9 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 9 LTEEN-FDEVIRN---NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCTTT-HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHHhc---CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc--cCHHHHHhcCcccCCEEEEE
Confidence 44444 4555544 346566553 322 22356677788888777777777643 34689999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhh
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
++ +.....+.|..+.+.|.++|++.
T Consensus 83 ~~-g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 83 VN-GQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred cC-CcEEEeeeccCCHHHHHHHHHHH
Confidence 65 44444578988999999999864
No 268
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.47 E-value=0.00077 Score=56.43 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=65.8
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-e---CCCCCCcHHHHHHHHhhcc---CceEEEEEeeccccHHHHHHcCCCCCCEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-S---KTGERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~---~~~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Ptl 334 (540)
++..+ +++.+.. +++.+|.| . ..|....+.+..++..+.+ .+.|+.+.... ...++++|+|.+.|++
T Consensus 12 l~~~~-~~~~~~~---~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 12 LRKSN-FAEALAA---HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRGYPTI 85 (120)
T ss_dssp CCTTT-HHHHHHH---CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCSSSEE
T ss_pred echhh-HHHHHcc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCcccEE
Confidence 34333 3444543 34556655 2 3455567888888887753 45666665432 2468999999999999
Q ss_pred EEEeCCCC-ceeeecCCCChhHHHHHHHhhc
Q 009206 335 VFLKDPGV-KPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 335 v~fk~~~~-~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
++|+++.. .+..|.|..+.+.|.+|++.+.
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 99986553 2356889889999999998753
No 269
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.45 E-value=0.00018 Score=68.27 Aligned_cols=91 Identities=13% Similarity=0.064 Sum_probs=65.1
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhh-------------------------hHHHH
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~-------------------------~~l~~ 204 (540)
.+++++|.|| +.||+.|....|.+.+++++++.. +.|..|+++..... ..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 999999999999999999999754 47777777642221 22455
Q ss_pred hCCCCccceee-----eeeEEEEeC-CCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 205 RKPIGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 205 ~~~~~~~~~V~-----~~Ptl~~f~-~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|+ |. .+|+++++- +|.. ...+.| .++.+.|.+.+...
T Consensus 131 ~yg------v~~~~g~~~p~~~lID~~G~i----~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYN------VLFDDSVSLRAFVLIDMNGIV----QHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTT------CEETTTEECEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CccccCCcccEEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 555 88 899988885 5532 222333 35688898888664
No 270
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.45 E-value=0.00045 Score=64.07 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=29.4
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG 184 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~ 184 (540)
+.++.+++|+.+||++|.++.|.+.++.+.+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~ 53 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS 53 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC
Confidence 467899999999999999999999999887654
No 271
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.45 E-value=0.00037 Score=60.64 Aligned_cols=92 Identities=20% Similarity=0.212 Sum_probs=64.5
Q ss_pred hhhhhhhcCCCceEEEEEe-C---CCCCCcHHHHHHHHhhccC---ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCC
Q 009206 268 GKNFLAKTGPHKVKVIFFS-K---TGERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP 340 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~---~~~~~~~~~~~~A~~~~~~---~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~ 340 (540)
+++.+.. +++.+|.|. + .|....+.+..++..+.+. +.|+.|... ....++++|+|.+.|++++|+++
T Consensus 27 ~~~~~~~---~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G 101 (140)
T 2dj1_A 27 FDNFVAD---KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT--SASMLASKFDVSGYPTIKILKKG 101 (140)
T ss_dssp HHHHHTT---CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--TCHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHhc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--ccHHHHHHCCCCccCeEEEEECC
Confidence 4444442 456666663 2 2344677788888877654 666666432 23689999999999999999764
Q ss_pred CCceeeecCCCChhHHHHHHHhhccC
Q 009206 341 GVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (540)
Q Consensus 341 ~~~~~~y~G~~~~~~l~~fi~~~~~~ 366 (540)
. ...|.|..+.+.|.+||+....+
T Consensus 102 ~--~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 102 Q--AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp E--EEECCSCCCHHHHHHHHHHHHSS
T ss_pred c--EEEcCCCCCHHHHHHHHHHhcCC
Confidence 3 56688999999999999886443
No 272
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.44 E-value=8.6e-05 Score=66.61 Aligned_cols=94 Identities=7% Similarity=0.010 Sum_probs=58.8
Q ss_pred CcEEEEEE-ecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCC------------Cccceeeeee--
Q 009206 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI------------GQIFFRRGLP-- 218 (540)
Q Consensus 154 ~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~------------~~~~~V~~~P-- 218 (540)
++++|.|| +.||+.|....|.+.++.++++....|..|+++........++++++ .+.|.+...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~ 115 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLS 115 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccC
Confidence 47888888 89999999999999999999875446777777643332223333221 1133488888
Q ss_pred -----EEEEeCCCCCCCCCcccccCCCC---HHHHHHHHHHh
Q 009206 219 -----SLVAFPPGCKSSDCMTRFEGELS---VDAVTDWFATA 252 (540)
Q Consensus 219 -----tl~~f~~g~~~~~~~~~y~G~~~---~~~i~~fi~~~ 252 (540)
++++ ++|.. ...+.|... .+.+++-+.+.
T Consensus 116 g~~~~~~li-~~G~i----~~~~~g~~~~~~~~~~~~~l~~~ 152 (159)
T 2a4v_A 116 GSIRSHFIF-VDGKL----KFKRVKISPEVSVNDAKKEVLEV 152 (159)
T ss_dssp CBCCEEEEE-ETTEE----EEEEESCCHHHHHHHHHHHHHHH
T ss_pred CccceEEEE-cCCEE----EEEEccCCccccHHHHHHHHHHH
Confidence 5666 77753 334455443 34444444443
No 273
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.41 E-value=0.0005 Score=59.96 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=60.8
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+. |....|.+..++..|.+.+.|+.|... ....++++|+|.+.|++++|..++.. ..+.|..+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~~g~~-~~~~G~~~~ 127 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVD--KEPELARDFGIQSIPTIWFVPMKGEP-QVNMGALSK 127 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEECSSSCC-EEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECC--CCHHHHHHcCCCCcCEEEEEeCCCCE-EEEeCCCCH
Confidence 45656655 332 233456777788888777777777643 24689999999999999999665543 468899999
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||+..
T Consensus 128 ~~l~~~l~~~ 137 (141)
T 3hxs_A 128 EQLKGYIDKV 137 (141)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 274
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.40 E-value=0.00012 Score=65.74 Aligned_cols=96 Identities=11% Similarity=0.053 Sum_probs=62.8
Q ss_pred CCCcEEEEEEe-cCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhCCC------------Cccceeee-
Q 009206 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI------------GQIFFRRG- 216 (540)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~~~------------~~~~~V~~- 216 (540)
.+++++|.||+ .||++|....|.+.++.+++++. +.|..|+++........++++++ .+.|.+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 35689999998 99999999999999999999865 47778888744333333333322 11233665
Q ss_pred -----------eeEEEEeC-CCCCCCCCcccccC---CCCHHHHHHHHHH
Q 009206 217 -----------LPSLVAFP-PGCKSSDCMTRFEG---ELSVDAVTDWFAT 251 (540)
Q Consensus 217 -----------~Ptl~~f~-~g~~~~~~~~~y~G---~~~~~~i~~fi~~ 251 (540)
.|+.+++- +|.. ...|.| ....+.|.+.+.+
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i----~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQV----VQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCE----EEEECSCCSTTHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeE----EEEEcCCCcccCHHHHHHHHHH
Confidence 89999985 4532 223333 2335666666544
No 275
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.38 E-value=0.00036 Score=57.38 Aligned_cols=83 Identities=18% Similarity=0.235 Sum_probs=58.0
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 20 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (107)
T 2i4a_A 20 SGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLMLVRD-GKVIDKKVGALPK 96 (107)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEEEeC-CEEEEEecCCCCH
Confidence 456666554 322 223456666777776667777776433 357999999999999999964 4433457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||+++
T Consensus 97 ~~l~~~l~~~ 106 (107)
T 2i4a_A 97 SQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999764
No 276
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.36 E-value=0.00032 Score=58.16 Aligned_cols=82 Identities=18% Similarity=0.383 Sum_probs=59.5
Q ss_pred ceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.+|.| .+. |....+.+..++..+.+.+.|+.+.... .+.++++|+|.+.|++++|+++ .....+.|..+.+
T Consensus 23 ~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~ 99 (111)
T 3gnj_A 23 KACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYFKDG-EYKGKMAGDVEDD 99 (111)
T ss_dssp CCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEEETT-EEEEEEESSCCHH
T ss_pred CEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEEECC-EEEEEEeccCCHH
Confidence 4555555 332 2234566777888887678888876433 4689999999999999999754 3344578988999
Q ss_pred HHHHHHHhh
Q 009206 355 RLSEVMEQN 363 (540)
Q Consensus 355 ~l~~fi~~~ 363 (540)
.|.+||++.
T Consensus 100 ~l~~~l~~~ 108 (111)
T 3gnj_A 100 EVEQMIADV 108 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999864
No 277
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.34 E-value=0.00053 Score=56.76 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=60.6
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhcc---CceEEEEEeeccccHHHHHHcCCCCCCEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Ptl 334 (540)
++..+ +++.+. +++.+|.| .+.| ....+.+..++..+.. .+.++.+.. .....++++|+|.+.|++
T Consensus 10 l~~~~-~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~--~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 10 LTENN-FDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDC--TAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCTTT-HHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEET--TTCHHHHHHTTCCSSSEE
T ss_pred cChhh-HHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEec--cccHhHHHhcCCCcccEE
Confidence 44444 455554 23555545 3322 2234566667766542 344555543 234689999999999999
Q ss_pred EEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 335 v~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
++|+++ .....+.|..+.+.|.+||+++
T Consensus 83 ~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 83 LLFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 999764 3344678999999999999874
No 278
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.33 E-value=0.00044 Score=59.11 Aligned_cols=85 Identities=14% Similarity=0.098 Sum_probs=59.7
Q ss_pred eEEEEEeCCC---CCCcHHHHHHHHhhcc-CceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 009206 280 VKVIFFSKTG---ERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (540)
Q Consensus 280 ~~vv~f~~~~---~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~ 355 (540)
++|.|+.+.| ....|.+..++..+.+ .+.|+.|... ....++++|+|.+.||+++|+++. ...+.|..+.+.
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G~--~~~~~G~~~~~~ 100 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT--EQPGLSGRFIINALPTIYHCKDGE--FRRYQGPRTKKD 100 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEETTE--EEECCSCCCHHH
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc--CCHHHHHHcCCcccCEEEEEeCCe--EEEeecCCCHHH
Confidence 5444554432 2345667777777764 5677776543 236799999999999999997543 456889999999
Q ss_pred HHHHHHhhccCCC
Q 009206 356 LSEVMEQNKLQEL 368 (540)
Q Consensus 356 l~~fi~~~~~~~l 368 (540)
|.+||+......+
T Consensus 101 l~~~l~~~~~~~~ 113 (126)
T 1x5e_A 101 FINFISDKEWKSI 113 (126)
T ss_dssp HHHHHHTCGGGGS
T ss_pred HHHHHHHHhhccC
Confidence 9999998654433
No 279
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.33 E-value=0.00037 Score=59.85 Aligned_cols=73 Identities=15% Similarity=0.302 Sum_probs=49.8
Q ss_pred CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
.+....|.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.+.|.+||++.
T Consensus 49 ~C~~~~p~~~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 49 PCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp CCCTTHHHHTTC-------CEEEEEETTS--CTTTGGGGTCCBSSEEEEEES-SSEEEEEESCCCHHHHHHHHTTT
T ss_pred CcHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEEC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 44455777777777776667777776433 357999999999999999965 44444578988999999999763
No 280
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.33 E-value=0.00029 Score=60.69 Aligned_cols=83 Identities=18% Similarity=0.192 Sum_probs=59.7
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....|.+..++..+.+.+.++.|.... ...++++|+|.+.||+++|++ +.....+.|..+.
T Consensus 42 ~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 118 (128)
T 3ul3_B 42 NTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK--NESLARKFSVKSLPTIILLKN-KTMLARKDHFVSS 118 (128)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEET-TEEEEEESSCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEEC-CEEEEEecCCCCH
Confidence 456666553 32 2334567777888887667777776432 368999999999999999964 4444457898999
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||+++
T Consensus 119 ~~l~~~l~~~ 128 (128)
T 3ul3_B 119 NDLIALIKKH 128 (128)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 9999998753
No 281
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.33 E-value=0.0012 Score=62.85 Aligned_cols=42 Identities=10% Similarity=-0.145 Sum_probs=36.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhccc-ceeeeecc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELG 194 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~ 194 (540)
.++++||.|+|.||+.|. -.|.++++.+++++.+ .|..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 468999999999999998 7899999999997654 78888875
No 282
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.33 E-value=0.00015 Score=65.48 Aligned_cols=62 Identities=16% Similarity=0.089 Sum_probs=47.5
Q ss_pred CCCcEEEEEEecC-CCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEE
Q 009206 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (540)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl 220 (540)
.+++++|.||+.| |++|+...|.++++.+++ ..+.+..|+++........+++++ +..+|.+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~------~~~~~~~ 105 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANG------IDKVETL 105 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSS------CTTEEEE
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcC------CCCceEe
Confidence 4679999999999 999999999999999999 556888888875444344455555 4456644
No 283
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.33 E-value=0.00067 Score=56.52 Aligned_cols=83 Identities=13% Similarity=0.209 Sum_probs=58.9
Q ss_pred CceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 25 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~ 101 (115)
T 1thx_A 25 EQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRLVKG-EQILDSTEGVISK 101 (115)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEEEcC-CEEEEEecCCCCH
Confidence 34556655 3322 224566777888887667777776432 367999999999999999964 4333457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+|+++.
T Consensus 102 ~~l~~~l~~~ 111 (115)
T 1thx_A 102 DKLLSFLDTH 111 (115)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 284
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.32 E-value=0.00035 Score=65.83 Aligned_cols=90 Identities=16% Similarity=0.195 Sum_probs=64.3
Q ss_pred eEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 009206 280 VKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (540)
Q Consensus 280 ~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~ 355 (540)
+.+|.| .+. |....|.+..++..+.+.+.|+.|.... ...++++|+|.+.||+++|+++ .....+.|..+.+.
T Consensus 116 ~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~ 192 (210)
T 3apq_A 116 LWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGD--DRMLCRMKGVNSYPSLFIFRSG-MAAVKYNGDRSKES 192 (210)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEECTT-SCCEECCSCCCHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCc--cHHHHHHcCCCcCCeEEEEECC-CceeEecCCCCHHH
Confidence 445544 332 2334677777888887777777776432 3689999999999999999654 44556889999999
Q ss_pred HHHHHHhhccCCCcccc
Q 009206 356 LSEVMEQNKLQELPQLR 372 (540)
Q Consensus 356 l~~fi~~~~~~~lp~l~ 372 (540)
|.+||....-+.+.+|+
T Consensus 193 l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 193 LVAFAMQHVRSTVTELS 209 (210)
T ss_dssp HHHHHHHHHHCCSSCC-
T ss_pred HHHHHHHhCcccceecC
Confidence 99999987655555543
No 285
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.32 E-value=0.00041 Score=56.94 Aligned_cols=83 Identities=20% Similarity=0.278 Sum_probs=59.7
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....+.+..++..+.+.+.|+.+... ....++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~ 95 (106)
T 3die_A 19 SGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVD--ENPSTAAKYEVMSIPTLIVFKD-GQPVDKVVGFQPK 95 (106)
T ss_dssp SSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSBSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECC--cCHHHHHhCCCcccCEEEEEeC-CeEEEEEeCCCCH
Confidence 346566553 32 223456677788888777777777643 2468999999999999999974 4444457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.++|++.
T Consensus 96 ~~l~~~l~~~ 105 (106)
T 3die_A 96 ENLAEVLDKH 105 (106)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999763
No 286
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.31 E-value=0.00038 Score=66.51 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=66.9
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (540)
.+++++|.|| +.||+.|....|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4678999999 999999999999999999998654 477777776543333344444 21 12
Q ss_pred ccee-----eeeeEEEEeC-CCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 211 IFFR-----RGLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V-----~~~Ptl~~f~-~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|.| ...|+.+++- +|.. ...+.| .++.+.|.+.+.+.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I----~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCV----RHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 3457 3789999885 4432 222333 46788888888764
No 287
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.31 E-value=0.00043 Score=57.20 Aligned_cols=83 Identities=14% Similarity=0.261 Sum_probs=58.2
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (108)
T 2trx_A 20 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 96 (108)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEEeC-CEEEEEEecCCCH
Confidence 456666554 322 223566677888877667777766432 357999999999999999964 4333457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+|+++.
T Consensus 97 ~~l~~~l~~~ 106 (108)
T 2trx_A 97 GQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999763
No 288
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.31 E-value=0.00039 Score=59.04 Aligned_cols=83 Identities=14% Similarity=0.167 Sum_probs=57.8
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 31 ~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 107 (119)
T 1w4v_A 31 ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAMKN-GDVVDKFVGIKDE 107 (119)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEEeC-CcEEEEEcCCCCH
Confidence 345566553 322 223456666777776667777776432 367999999999999999964 4333457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||++.
T Consensus 108 ~~l~~~l~~~ 117 (119)
T 1w4v_A 108 DQLEAFLKKL 117 (119)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 289
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.30 E-value=0.00058 Score=57.75 Aligned_cols=90 Identities=23% Similarity=0.292 Sum_probs=60.9
Q ss_pred hhhhhhhcCCCceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+... .+++.+|.| .+- |....|.+..++..|.+ +.|+.|... ....++++|+|.+.|++++|++ +..
T Consensus 22 f~~~l~~~-~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~-G~~ 96 (116)
T 3qfa_C 22 FQEALDAA-GDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASECEVKSMPTFQFFKK-GQK 96 (116)
T ss_dssp HHHHHHHH-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT--TTHHHHHHTTCCSSSEEEEESS-SSE
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHcCCccccEEEEEeC-CeE
Confidence 55666533 234556655 332 23345677778887765 667766543 2468999999999999999965 444
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.|. +.+.|.++|++.
T Consensus 97 ~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 97 VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESC-CHHHHHHHHHHH
T ss_pred EEEEcCC-CHHHHHHHHHHh
Confidence 4457888 899999999763
No 290
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.28 E-value=0.00058 Score=56.13 Aligned_cols=82 Identities=17% Similarity=0.195 Sum_probs=57.9
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.+|.|. +.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|+++ .....+.|..+.+
T Consensus 19 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~ 95 (109)
T 2yzu_A 19 PLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMSIPTVILFKDG-QPVEVLVGAQPKR 95 (109)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHH
T ss_pred CeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC--CHhHHHhCCCCcCCEEEEEeCC-cEeeeEeCCCCHH
Confidence 45566554 322 223466677888877667777776432 3679999999999999999653 3333578988899
Q ss_pred HHHHHHHhh
Q 009206 355 RLSEVMEQN 363 (540)
Q Consensus 355 ~l~~fi~~~ 363 (540)
.|.+|+++.
T Consensus 96 ~l~~~l~~~ 104 (109)
T 2yzu_A 96 NYQAKIEKH 104 (109)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 999999864
No 291
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.28 E-value=0.00029 Score=58.32 Aligned_cols=82 Identities=11% Similarity=0.167 Sum_probs=49.8
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+. |....|.+..++..| +.+.|+.++... ...++++|+|.+.||+++|+++ .....+.|..+.
T Consensus 18 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~~~ 93 (105)
T 4euy_A 18 QQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD--MQEIAGRYAVFTGPTVLLFYNG-KEILRESRFISL 93 (105)
T ss_dssp SSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC--C---------CCCCEEEEEETT-EEEEEEESSCCH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC--CHHHHHhcCCCCCCEEEEEeCC-eEEEEEeCCcCH
Confidence 45666655 332 233456777788877 356777776433 3579999999999999999854 333456898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.++|++.
T Consensus 94 ~~l~~~l~~~ 103 (105)
T 4euy_A 94 ENLERTIQLF 103 (105)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999863
No 292
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.23 E-value=0.00073 Score=59.62 Aligned_cols=90 Identities=14% Similarity=0.185 Sum_probs=63.6
Q ss_pred hhhhhhhcCCCceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+. .+++.+|.| .+. +....+.+..++..+.+.+.|+.|... ....++++|+|.+.|++++|++ +..
T Consensus 48 ~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~-G~~ 121 (148)
T 3p2a_A 48 LDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTE--AEPALSTRFRIRSIPTIMLYRN-GKM 121 (148)
T ss_dssp HHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEE
T ss_pred HHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECc--CCHHHHHHCCCCccCEEEEEEC-CeE
Confidence 455552 345656655 332 223456777788888777777777643 3468999999999999999975 444
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.|..+.+.|.+||++.
T Consensus 122 ~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 122 IDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp EEEESSCCCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHH
Confidence 44578999999999999874
No 293
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.23 E-value=0.0017 Score=64.01 Aligned_cols=98 Identities=9% Similarity=0.181 Sum_probs=70.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEE----eCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF----SKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f----~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
++..+ +++.+... .+++++|.| |..|....|.+..++..+.+.+.|+.|+... .+.++++|+|.+.||+++|
T Consensus 12 ~~~~~-f~~~~~~~-~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 87 (287)
T 3qou_A 12 INESN-LQQVLEQS-MTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRAIPTVYLF 87 (287)
T ss_dssp CCTTT-HHHHHTTT-TTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCSSSEEEEE
T ss_pred CCHHH-HHHHHHhc-CCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCCCCeEEEE
Confidence 45545 45566432 234556644 3456667899999999888777788776432 3689999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhhc
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
+++ .....+.|..+.+.+..|+....
T Consensus 88 ~~G-~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 88 QNG-QPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHHHHHS
T ss_pred ECC-EEEEEeeCCCCHHHHHHHHHHHc
Confidence 754 33334789889999999998753
No 294
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.20 E-value=0.0007 Score=55.47 Aligned_cols=90 Identities=22% Similarity=0.246 Sum_probs=60.3
Q ss_pred hhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.++.. .+++.++.| .+.| ....+.+..++..+.+ +.|+.+... +...++++|+|.+.|++++|+++ ..
T Consensus 11 ~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g-~~ 85 (105)
T 3m9j_A 11 FQEALDAA-GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVD--DCQDVASESEVKSMPTFQFFKKG-QK 85 (105)
T ss_dssp HHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETT--TCHHHHHHTTCCBSSEEEEEETT-EE
T ss_pred HHHHHHhc-CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhh--hhHHHHHHcCCCcCcEEEEEECC-eE
Confidence 45555533 244556655 3322 2235667778877754 667766543 34689999999999999999754 33
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.|. +.+.|.+++++.
T Consensus 86 ~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 86 VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCC-CHHHHHHHHHHh
Confidence 3347888 889999998763
No 295
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.19 E-value=0.00074 Score=57.68 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=60.5
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +.| ....+.+..++..+.+.+.|..|.........++++|+|.+.|++++|..++.....+.|..+.
T Consensus 26 ~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~ 105 (126)
T 2l57_A 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRK 105 (126)
T ss_dssp SSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCH
T ss_pred CCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCH
Confidence 445566553 322 2235666677777766677777752122246799999999999999998555554557898899
Q ss_pred hHHHHHHHhhc
Q 009206 354 SRLSEVMEQNK 364 (540)
Q Consensus 354 ~~l~~fi~~~~ 364 (540)
+.|.++|+...
T Consensus 106 ~~l~~~l~~~~ 116 (126)
T 2l57_A 106 NNIETILNSLG 116 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 296
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.17 E-value=0.0008 Score=54.66 Aligned_cols=89 Identities=19% Similarity=0.253 Sum_probs=59.6
Q ss_pred hhhhhhhcCCCceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+.. +++.++.|. +.| ....+.+..++..+.+ +.++.+.... ...++++|+|.+.|++++|+++ ..
T Consensus 9 ~~~~~~~---~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~ 81 (104)
T 2e0q_A 9 FDSFLAS---HEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMSLPTVIFFKDG-EP 81 (104)
T ss_dssp HHHHHHH---SSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSCEEEEEETT-EE
T ss_pred HHHHHhc---CCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC--CHHHHHhCCccccCEEEEEECC-eE
Confidence 3445533 345566554 322 2234566667777765 7777766432 3679999999999999999654 33
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.|..+.+.|.+|+++.
T Consensus 82 ~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 82 VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp EEEEESCCCHHHHHHHHHHH
T ss_pred hhhccCCCCHHHHHHHHHHH
Confidence 34578988999999999764
No 297
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.17 E-value=0.00085 Score=58.38 Aligned_cols=86 Identities=15% Similarity=0.243 Sum_probs=60.5
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....+.+..++..+.+.+.|+.|.... ...++++|+|.+.|++++|..++.. +.+.|..+.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~G~~-~~~~G~~~~ 114 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPMEGKP-EMAQGAMPK 114 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECSSSCC-EEEESCCCH
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECCCCcE-EEEeCCCCH
Confidence 345566553 32 2223566777888887677777776432 3679999999999999999433433 368899999
Q ss_pred hHHHHHHHhhccC
Q 009206 354 SRLSEVMEQNKLQ 366 (540)
Q Consensus 354 ~~l~~fi~~~~~~ 366 (540)
+.|.+||++....
T Consensus 115 ~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 115 ASFKKAIDEFLLK 127 (136)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhhc
Confidence 9999999886443
No 298
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.16 E-value=0.0005 Score=59.43 Aligned_cols=83 Identities=14% Similarity=0.271 Sum_probs=59.2
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....+.+..++..+.+.+.|+.|+..+ ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 40 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 116 (128)
T 2o8v_B 40 DGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 116 (128)
T ss_dssp SSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT--CCTTSGGGTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEeC-CEEEEEEcCCCCH
Confidence 456666553 32 2335677788888887667777776433 356899999999999999964 4433457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||++.
T Consensus 117 ~~l~~~l~~~ 126 (128)
T 2o8v_B 117 GQLKEFLDAN 126 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999763
No 299
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.15 E-value=0.00042 Score=60.74 Aligned_cols=83 Identities=17% Similarity=0.229 Sum_probs=60.3
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+. |....+.+..++..+.+.+.|+.|.... ...++++|+|.+.||+++|+++ .....+.|..+.
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~ 100 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFCHG-RPVWEQVGQIYP 100 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEEETT-EEEEEEESSCCH
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEEeCC-cEEEEEcCCCCH
Confidence 44556655 332 2234567777888887778888876433 4689999999999999999754 334457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||+..
T Consensus 101 ~~l~~~l~~~ 110 (140)
T 3hz4_A 101 SILKNAVRDM 110 (140)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999864
No 300
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.15 E-value=0.00036 Score=59.19 Aligned_cols=83 Identities=7% Similarity=0.017 Sum_probs=57.8
Q ss_pred CceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC---
Q 009206 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS--- 350 (540)
Q Consensus 278 ~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~--- 350 (540)
+++.+|.| .+.| ....|.+..++..+.+.+.|+.+.... ...++++|+|.+.||+++|++++. ...+.|.
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~~~-~~~~~g~~~~ 97 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQIN 97 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEEGG-GTEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeCCCc-cceeeccccC
Confidence 34556655 3322 234566777888887677777776433 367999999999999999987554 3335553
Q ss_pred -CChhHHHHHHHhh
Q 009206 351 -FNNSRLSEVMEQN 363 (540)
Q Consensus 351 -~~~~~l~~fi~~~ 363 (540)
.+.+.|.+|++..
T Consensus 98 ~~~~~~l~~~l~~~ 111 (122)
T 3aps_A 98 SRDAKTIAALIYGK 111 (122)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 7889999999874
No 301
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.14 E-value=0.00078 Score=60.39 Aligned_cols=83 Identities=11% Similarity=0.097 Sum_probs=60.2
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+. +....|.+..++..|.+.+.|+.|+..+ .+.++++|+|.+.||+++|++ +.....+.|..+.
T Consensus 64 ~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~~-G~~~~~~~G~~~~ 140 (155)
T 2ppt_A 64 DLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFHK-GRELARAAGARPA 140 (155)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEeC-CeEEEEecCCCCH
Confidence 34555555 332 2234567777888887778888876533 357999999999999999975 4334457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+|+++.
T Consensus 141 ~~l~~~l~~~ 150 (155)
T 2ppt_A 141 SELVGFVRGK 150 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 302
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.13 E-value=0.00062 Score=57.46 Aligned_cols=83 Identities=17% Similarity=0.161 Sum_probs=58.4
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 30 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~-g~~~~~~~G~~~~ 106 (121)
T 2i1u_A 30 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT--NPETARNFQVVSIPTLILFKD-GQPVKRIVGAKGK 106 (121)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEEC-CEEEEEecCCCCH
Confidence 345566553 32 2234566777888776667777776432 467999999999999999984 3333457898888
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+||++.
T Consensus 107 ~~l~~~l~~~ 116 (121)
T 2i1u_A 107 AALLRELSDV 116 (121)
T ss_dssp HHHHHHTCSC
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 303
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.11 E-value=0.00028 Score=56.83 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=40.7
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhC-CCCccceeeeeeEEEEeCCC
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK-PIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~-~~~~~~~V~~~Ptl~~f~~g 226 (540)
-++.|+++||++|+++.+.+++.. ..+..+|++ ......+.+.+ + +.++|++. .+|
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~-~~~~~~l~~~~~~------~~~vP~l~--~~g 63 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDAS-TSLRQEMVQRANG------RNTFPQIF--IGD 63 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSC-HHHHHHHHHHHHS------SCCSCEEE--ETT
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECC-HHHHHHHHHHhCC------CCCcCEEE--ECC
Confidence 367799999999999888887652 356777777 22333477777 7 88999984 355
No 304
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.11 E-value=0.00066 Score=64.24 Aligned_cols=97 Identities=14% Similarity=0.060 Sum_probs=65.7
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PI------------GQ 210 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (540)
.+++++|.|| +.||++|..-.|.+.++.++++.. +.|..|+++........++++ ++ .+
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 4578999999 999999999999999999999754 477777776443333334433 11 11
Q ss_pred cceee------eeeEEEEeCC-CCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 211 IFFRR------GLPSLVAFPP-GCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~------~~Ptl~~f~~-g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|.+. ..|+.+++-+ |.. ...+.| .++.+++++.+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I----~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGIL----RQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHh
Confidence 34463 6999999854 432 222223 35788888888664
No 305
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.11 E-value=0.0006 Score=55.95 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=56.6
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.++.|. +.| ....+.+..++..+.+.+.++.+...+ ...++++|+|.+.|++++|++ +.....+.|..+.+
T Consensus 18 ~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~ 94 (105)
T 1nsw_A 18 GPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE--NPETTSQFGIMSIPTLILFKG-GRPVKQLIGYQPKE 94 (105)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHH
T ss_pred CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC--CHHHHHHcCCccccEEEEEeC-CeEEEEEecCCCHH
Confidence 45566553 322 223566677887776667777776432 367999999999999999964 43334578988888
Q ss_pred HHHHHHHh
Q 009206 355 RLSEVMEQ 362 (540)
Q Consensus 355 ~l~~fi~~ 362 (540)
.|.+++++
T Consensus 95 ~l~~~l~~ 102 (105)
T 1nsw_A 95 QLEAQLAD 102 (105)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHH
Confidence 89998865
No 306
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.10 E-value=0.00077 Score=56.09 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=58.1
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +.| ....+.+..++..+.+.+.|..+.... ...++++|+|.+.|++++|+++ .....+.|..+.
T Consensus 23 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~ 99 (112)
T 1t00_A 23 DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQGG-EVAKTIVGAKPK 99 (112)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCH
T ss_pred CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEeCC-EEEEEEeCCCCH
Confidence 345566553 322 223566677888886667777776432 4689999999999999999754 333457898888
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+++++.
T Consensus 100 ~~l~~~l~~~ 109 (112)
T 1t00_A 100 AAIVRDLEDF 109 (112)
T ss_dssp HHHHHHTHHH
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 307
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.08 E-value=0.0011 Score=54.59 Aligned_cols=82 Identities=18% Similarity=0.193 Sum_probs=57.3
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.++.|. +.| ....+.+..++..+.+.+.++.+... ....++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 95 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD--ESPNVASEYGIRSIPTIMVFKG-GKKCETIIGAVPK 95 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHHTCCSSCEEEEESS-SSEEEEEESCCCH
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECC--CCHHHHHHCCCCcCCEEEEEeC-CEEEEEEeCCCCH
Confidence 345566553 322 22356667778777766777777543 2467999999999999999964 4433457898888
Q ss_pred hHHHHHHHh
Q 009206 354 SRLSEVMEQ 362 (540)
Q Consensus 354 ~~l~~fi~~ 362 (540)
+.|.+++++
T Consensus 96 ~~l~~~l~~ 104 (107)
T 1dby_A 96 ATIVQTVEK 104 (107)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 899999876
No 308
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.07 E-value=0.0012 Score=55.74 Aligned_cols=93 Identities=19% Similarity=0.139 Sum_probs=61.5
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
+++.+.+++.++. +++.+|.|. +. |....+.+..++..+.+ +.|+.+... ....++++|+|.+.|++++|
T Consensus 17 ~~~~~~~~~~~~~---~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 17 LTNLTEFRNLIKQ---NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD--ESPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCSBSEEEEE
T ss_pred cCCHHHHHHHHhC---CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHCCCCcccEEEEE
Confidence 4444445555553 346566553 32 23346777778877755 677776543 23679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHh
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
+++ .....+.|.. .+.|.++|++
T Consensus 91 ~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 91 KDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred eCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 754 3333477876 8889998875
No 309
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.06 E-value=0.0012 Score=54.09 Aligned_cols=91 Identities=26% Similarity=0.269 Sum_probs=59.5
Q ss_pred hhhhhhhcCCCceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+... .+++.++.|. +.| ....+.+..++..+.+.+.|..+... ....++++|+|.+.|++++|+++ ..
T Consensus 11 ~~~~l~~~-~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~ 86 (106)
T 1xwb_A 11 LDGQLTKA-SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD--ECEDIAMEYNISSMPTFVFLKNG-VK 86 (106)
T ss_dssp HHHHHHHH-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-EE
T ss_pred HHHHHHhc-CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc--chHHHHHHcCCCcccEEEEEcCC-cE
Confidence 44555432 2346566553 322 22345667777777666677766543 24679999999999999999754 33
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.| .+.+.|.+++++.
T Consensus 87 ~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 87 VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEEEES-CCHHHHHHHHHHT
T ss_pred EEEEcC-CCHHHHHHHHHHh
Confidence 345678 6888899998763
No 310
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.06 E-value=0.00056 Score=61.42 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=37.1
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.|| +.||+.|..-.|.+.++..+++... .+..|+.+........+++++
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~ 86 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNK 86 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcC
Confidence 4678999999 9999999999999998888887654 677777775444444555554
No 311
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.05 E-value=0.00047 Score=62.53 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=64.6
Q ss_pred cCCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHHhCCCC------------ccceee-
Q 009206 151 HDSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKPIG------------QIFFRR- 215 (540)
Q Consensus 151 ~~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~~~~~~------------~~~~V~- 215 (540)
..++++++.|| +.||+.|..-.|.+.++..+++... .+..|+.+........++++++. +.|+|.
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~ 110 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYH 110 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCcc
Confidence 46788999998 9999999999999999988887654 77778877554444455555431 122242
Q ss_pred ---------eeeEEEEeC-CCCCCCCCcc----cccCCCCHHHHHHHHHHh
Q 009206 216 ---------GLPSLVAFP-PGCKSSDCMT----RFEGELSVDAVTDWFATA 252 (540)
Q Consensus 216 ---------~~Ptl~~f~-~g~~~~~~~~----~y~G~~~~~~i~~fi~~~ 252 (540)
..|+..++- +|.. .+. ...+..+.++++..+.+.
T Consensus 111 ~~~~~~~~~~~p~tflID~~G~I---~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAKRAVFIVKPDGTV---AYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEECCEEEEECTTSBE---EEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCeeeEEEEECCCCEE---EEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 356766664 4532 011 112445788888877665
No 312
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.04 E-value=0.0014 Score=59.80 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.0
Q ss_pred CCCcEEEEEEecC-CCCccCChHHHHHHHHHHhcccceeeeecc
Q 009206 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (540)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~ 194 (540)
.+++++|.||+.| |+.|....|.+.++.++ ..+.|..|+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECC
Confidence 4679999999999 99999999999999988 33577777776
No 313
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.02 E-value=0.0011 Score=61.33 Aligned_cols=97 Identities=9% Similarity=-0.035 Sum_probs=66.3
Q ss_pred CCCcEEEEEEe-cCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHHhC----CC------------Cccce
Q 009206 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----PI------------GQIFF 213 (540)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~~~----~~------------~~~~~ 213 (540)
.+++++|.||+ .||+.|....|.+.++.++++.. +.|..|+++........++++ ++ .+.|.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 46789999995 99999999999999999998754 377777777544334455555 32 12344
Q ss_pred ee------eeeEEEEeC-CCCCCCCCcccccCC----CCHHHHHHHHHHh
Q 009206 214 RR------GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (540)
Q Consensus 214 V~------~~Ptl~~f~-~g~~~~~~~~~y~G~----~~~~~i~~fi~~~ 252 (540)
+. ..|+.+++- +|.. ...+.|. ++.+.|.+.+.+.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i----~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGII----QAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 65 369998885 4532 2333443 3688888888764
No 314
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.02 E-value=0.00014 Score=61.82 Aligned_cols=60 Identities=7% Similarity=0.084 Sum_probs=42.4
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh----hhhHHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~----~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
.++.|++|||++|+++.+.+++.+... ..+..||+++++ ....|++.+| +.++|++++ +|
T Consensus 20 ~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~v~i--~g 83 (114)
T 2hze_A 20 KVTIFVKYTCPFCRNALDILNKFSFKR---GAYEIVDIKEFKPENELRDYFEQITG------GKTVPRIFF--GK 83 (114)
T ss_dssp CEEEEECTTCHHHHHHHHHHTTSCBCT---TSEEEEEGGGSSSHHHHHHHHHHHHS------CCSSCEEEE--TT
T ss_pred CEEEEEeCCChhHHHHHHHHHHcCCCc---CceEEEEccCCCChHHHHHHHHHHhC------CCCcCEEEE--CC
Confidence 477799999999999888776543210 128889988653 2234778888 889999743 55
No 315
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.02 E-value=0.0013 Score=53.70 Aligned_cols=82 Identities=15% Similarity=0.236 Sum_probs=57.0
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.++.|. +.| ....+.+..++..+.+.+.+..+... ....++++|+|.+.|++++++++ .....+.|..+.
T Consensus 18 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~G~~~~ 94 (105)
T 1fb6_A 18 EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTD--EAPGIATQYNIRSIPTVLFFKNG-ERKESIIGAVPK 94 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-EEEEEEEECCCH
T ss_pred CCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCc--chHHHHHhCCCCcccEEEEEeCC-eEEEEEecCCCH
Confidence 345566554 322 22345667777777666777776543 23679999999999999999753 333446888888
Q ss_pred hHHHHHHHh
Q 009206 354 SRLSEVMEQ 362 (540)
Q Consensus 354 ~~l~~fi~~ 362 (540)
+.|.++|++
T Consensus 95 ~~l~~~l~~ 103 (105)
T 1fb6_A 95 STLTDSIEK 103 (105)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999876
No 316
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.01 E-value=0.0034 Score=59.23 Aligned_cols=42 Identities=10% Similarity=-0.175 Sum_probs=35.7
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhccc-ceeeeecc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELG 194 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~ 194 (540)
.++++||.|+|.||+.| .-.|.+.++.+++++.+ .|..|+|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 46899999999999999 56899999999997664 77778775
No 317
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.01 E-value=0.0013 Score=55.84 Aligned_cols=95 Identities=23% Similarity=0.199 Sum_probs=61.0
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhccC-ceEEEEEeeccccHHHHHHcCCCCCCEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~-~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~ 336 (540)
+++.+.+++.++ .+++.+|.| .+.| ....+.+..++..+.+. +.|..+... ....++++|+|.+.|++++
T Consensus 20 i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d--~~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 20 ISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD--EQSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT--TCHHHHHHHTCCSSSEEEE
T ss_pred cCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc--CCHHHHHHcCCCcccEEEE
Confidence 444343555553 334556555 3322 22345666677766544 666666533 2367999999999999999
Q ss_pred EeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 337 fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
|+++ .....+.|. +.+.|.+||++.
T Consensus 95 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 95 FKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9753 333346787 889999999763
No 318
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.01 E-value=0.0014 Score=54.71 Aligned_cols=81 Identities=21% Similarity=0.273 Sum_probs=55.6
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....|.+..++..+. .+.|..+... ....++++|+|.+.|++++|++ +.....+.|. +.
T Consensus 24 ~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~-~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~ 98 (109)
T 3f3q_A 24 DKLVVVDFYATWCGPCKMIAPMIEKFSEQYP-QADFYKLDVD--ELGDVAQKNEVSAMPTLLLFKN-GKEVAKVVGA-NP 98 (109)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEEEEEEESS-CH
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC--CCHHHHHHcCCCccCEEEEEEC-CEEEEEEeCC-CH
Confidence 456666553 32 2234566777777774 3667666543 3468999999999999999984 4444456787 67
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.++|+++
T Consensus 99 ~~l~~~i~~~ 108 (109)
T 3f3q_A 99 AAIKQAIAAN 108 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 8899998764
No 319
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.98 E-value=0.00035 Score=60.93 Aligned_cols=65 Identities=15% Similarity=0.233 Sum_probs=43.9
Q ss_pred ccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch---hh-hhHHHHhCCCCccceeeeeeEEE
Q 009206 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (540)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~---~~-~~~l~~~~~~~~~~~V~~~Ptl~ 221 (540)
|+.++..+. ++.|+++||++|+++.+.++++. ..+..+|++.+ +. ...|++.++ +.++|+|+
T Consensus 20 ~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g------~~~vP~l~ 85 (130)
T 2cq9_A 20 IQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 85 (130)
T ss_dssp HHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHS------SCCSSEEE
T ss_pred HHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhC------CCCcCEEE
Confidence 444454443 34499999999999999888753 24666777744 22 123677777 88999984
Q ss_pred EeCCC
Q 009206 222 AFPPG 226 (540)
Q Consensus 222 ~f~~g 226 (540)
.+|
T Consensus 86 --i~G 88 (130)
T 2cq9_A 86 --VNG 88 (130)
T ss_dssp --ETT
T ss_pred --ECC
Confidence 355
No 320
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.97 E-value=0.0019 Score=53.94 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=56.9
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+. |....+.+..++..+. .+.|..+... ....++++|+|.+.|++++|+++ .....+.|..+.
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~v~~~~G~~~~ 94 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSE--ARPELMKELGFERVPTLVFIRDG-KVAKVFSGIMNP 94 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGG--GCHHHHHHTTCCSSCEEEEEESS-SEEEEEESCCCH
T ss_pred CCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCc--CCHHHHHHcCCcccCEEEEEECC-EEEEEEcCCCCH
Confidence 34556655 332 2233566666777664 5677777643 24679999999999999999654 434457898899
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+++...
T Consensus 95 ~~l~~~~~~~ 104 (110)
T 2l6c_A 95 RELQALYASI 104 (110)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 321
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.94 E-value=0.0023 Score=52.13 Aligned_cols=90 Identities=19% Similarity=0.273 Sum_probs=58.1
Q ss_pred hhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+... .+++.++.| ++.| ....+.+..++..+. .+.|+.+.... ...++++|+|.+.|++++|+++ ..
T Consensus 10 ~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~ 84 (104)
T 2vim_A 10 LEKLINEN-KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ--NEEAAAKYSVTAMPTFVFIKDG-KE 84 (104)
T ss_dssp HHHHHHTT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EE
T ss_pred HHHHHHhc-CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC--CHHHHHHcCCccccEEEEEeCC-cE
Confidence 45555432 244556655 3322 223455666777664 56777776432 3679999999999999999854 33
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.| .+.+.|.+||++.
T Consensus 85 ~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 85 VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEEEES-SCHHHHHHHHHHH
T ss_pred EEEEeC-CCHHHHHHHHHhh
Confidence 334678 5888899998763
No 322
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.93 E-value=0.002 Score=53.74 Aligned_cols=88 Identities=20% Similarity=0.252 Sum_probs=58.6
Q ss_pred hhhhhhhcCCCceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+.. +++.+|.|. +.| ....+.+..++..+. .+.|..+.... ...++++|+|.+.|++++|+++ ..
T Consensus 19 f~~~~~~---~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~ 91 (112)
T 1syr_A 19 FDSIISQ---NELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDE--VSEVTEKENITSMPTFKVYKNG-SS 91 (112)
T ss_dssp HHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--THHHHHHTTCCSSSEEEEEETT-EE
T ss_pred HHHHHcc---CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCC--CHHHHHHcCCCcccEEEEEECC-cE
Confidence 4555643 346666553 322 223566666777764 46677665432 3679999999999999999854 33
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.|. +.+.|.+||++.
T Consensus 92 ~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 92 VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEEEESC-CHHHHHHHHHTT
T ss_pred EEEEeCC-CHHHHHHHHHHh
Confidence 3357888 889999999763
No 323
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=96.92 E-value=0.0013 Score=54.62 Aligned_cols=81 Identities=19% Similarity=0.218 Sum_probs=56.1
Q ss_pred ceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.+|.| .+.| ....+.+..++..+.+.+.|+.+... ....++++|+|.+.||+++|+++ .....+.|. +.+
T Consensus 25 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~~~ 100 (112)
T 1ep7_A 25 KPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD--AVAAVAEAAGITAMPTFHVYKDG-VKADDLVGA-SQD 100 (112)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TTHHHHHHHTCCBSSEEEEEETT-EEEEEEESC-CHH
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECC--chHHHHHHcCCCcccEEEEEECC-eEEEEEcCC-CHH
Confidence 3555555 3322 22346677788877666777777643 23689999999999999999754 333357787 888
Q ss_pred HHHHHHHhh
Q 009206 355 RLSEVMEQN 363 (540)
Q Consensus 355 ~l~~fi~~~ 363 (540)
.|.+||++.
T Consensus 101 ~l~~~l~~~ 109 (112)
T 1ep7_A 101 KLKALVAKH 109 (112)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 324
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.91 E-value=0.0022 Score=52.84 Aligned_cols=90 Identities=21% Similarity=0.272 Sum_probs=58.3
Q ss_pred hhhhhhhcCCCceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+... .+++.++.|. +. |....|.+..++..+ +.+.|+.+.... ...++++|+|.+.||+++|+++ ..
T Consensus 12 ~~~~~~~~-~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~ 86 (107)
T 1gh2_A 12 FQPELSGA-GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISATPTFQFFRNK-VR 86 (107)
T ss_dssp HHHHHHHT-TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEEETT-EE
T ss_pred HHHHHHhC-CCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCcccEEEEEECC-eE
Confidence 55555432 2345566553 32 223456677778777 457777776432 3679999999999999999764 33
Q ss_pred eeeecCCCChhHHHHHHHhh
Q 009206 344 PVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+.|. +..+|.+||++.
T Consensus 87 ~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 87 IDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEeCC-CHHHHHHHHHHh
Confidence 3346785 556699998764
No 325
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=96.91 E-value=0.0013 Score=59.78 Aligned_cols=35 Identities=11% Similarity=0.137 Sum_probs=29.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHH--hccc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL--EGIA 186 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l--~~~~ 186 (540)
+.++.++.|+.+||++|+++.|...++.+++ .+.+
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v 62 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKV 62 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcE
Confidence 4577899999999999999999999988887 5544
No 326
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.91 E-value=0.0014 Score=55.52 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=55.4
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +.| ....+.+..++..|.+ +.|..+...+ ...++++|+|.+.|++++|+++ .....+.|.. .
T Consensus 34 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~ 108 (122)
T 2vlu_A 34 KKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE--LKPIAEQFSVEAMPTFLFMKEG-DVKDRVVGAI-K 108 (122)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESSC-H
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC--CHHHHHHcCCCcccEEEEEeCC-EEEEEEeCcC-H
Confidence 345566553 322 2234666777777765 6677765432 4679999999999999999754 3334578887 8
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.+|+++.
T Consensus 109 ~~l~~~l~~~ 118 (122)
T 2vlu_A 109 EELTAKVGLH 118 (122)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8899999864
No 327
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.90 E-value=0.012 Score=63.47 Aligned_cols=85 Identities=13% Similarity=0.117 Sum_probs=60.4
Q ss_pred ceEEEEE-eC---CCCCCcHHHHHHHHhhcc---CceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCC---ceeeec
Q 009206 279 KVKVIFF-SK---TGERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYY 348 (540)
Q Consensus 279 ~~~vv~f-~~---~~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~---~~~~y~ 348 (540)
++.+|.| .+ .|....|.+..++..+.+ .+.|+.|+........++++|+|.++||+++|+++.. ....+.
T Consensus 31 k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~ 110 (519)
T 3t58_A 31 SAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPG 110 (519)
T ss_dssp SEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECC
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEec
Confidence 4556655 33 233457788888988876 5777777654333578999999999999999996332 334456
Q ss_pred CCCChhHHHHHHHhh
Q 009206 349 GSFNNSRLSEVMEQN 363 (540)
Q Consensus 349 G~~~~~~l~~fi~~~ 363 (540)
|..+.+.|.++|.+.
T Consensus 111 g~~~~~~L~~~l~~~ 125 (519)
T 3t58_A 111 AGANVQTLRMRLIDA 125 (519)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH
Confidence 778888888888764
No 328
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.85 E-value=0.00039 Score=58.05 Aligned_cols=65 Identities=8% Similarity=0.088 Sum_probs=44.5
Q ss_pred ccccccCCCcEEEEEEe-----cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhh-hHHHHhCCCCccceeeeeeE
Q 009206 146 FPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPS 219 (540)
Q Consensus 146 F~~~v~~~~~~lV~FYa-----pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~-~~l~~~~~~~~~~~V~~~Pt 219 (540)
+++++.+++ ++| |++ |||++|+++.+.+++.. +.+..+|+++++.. ..+.+..+ +.++|+
T Consensus 10 ~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g------~~~vP~ 75 (105)
T 2yan_A 10 LKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSN------WPTYPQ 75 (105)
T ss_dssp HHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHT------CCSSCE
T ss_pred HHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHC------CCCCCe
Confidence 444555444 444 777 99999999888887653 46788898866442 23556667 889999
Q ss_pred EEEeCCC
Q 009206 220 LVAFPPG 226 (540)
Q Consensus 220 l~~f~~g 226 (540)
| |.+|
T Consensus 76 v--~i~g 80 (105)
T 2yan_A 76 L--YVKG 80 (105)
T ss_dssp E--EETT
T ss_pred E--EECC
Confidence 8 4466
No 329
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=96.83 E-value=0.00041 Score=61.89 Aligned_cols=65 Identities=15% Similarity=0.209 Sum_probs=43.8
Q ss_pred ccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccch---hh-hhHHHHhCCCCccceeeeeeEEE
Q 009206 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (540)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~---~~-~~~l~~~~~~~~~~~V~~~Ptl~ 221 (540)
++..+.++ .+ +.|++|||++|+++.+.++++. ..+..+|++.+ +. ...|++.++ +.++|+|.
T Consensus 42 ~~~~i~~~-~V-vvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g------~~tvP~if 107 (146)
T 2ht9_A 42 IQETISDN-CV-VIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRIF 107 (146)
T ss_dssp HHHHHHHC-SE-EEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHS------CCCSCEEE
T ss_pred HHHHhcCC-CE-EEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhC------CCCcCeEE
Confidence 44444444 33 3399999999999999888763 24566777644 22 123777778 88999984
Q ss_pred EeCCC
Q 009206 222 AFPPG 226 (540)
Q Consensus 222 ~f~~g 226 (540)
.+|
T Consensus 108 --i~G 110 (146)
T 2ht9_A 108 --VNG 110 (146)
T ss_dssp --ETT
T ss_pred --ECC
Confidence 455
No 330
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=96.82 E-value=0.0011 Score=59.65 Aligned_cols=84 Identities=10% Similarity=0.158 Sum_probs=61.6
Q ss_pred CceEEEEEe-C---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCcee--------
Q 009206 278 HKVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPV-------- 345 (540)
Q Consensus 278 ~~~~vv~f~-~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~-------- 345 (540)
++++||-|. + .|....|.+..+|.+|.+.+.|+.|++.+ .++++++|+|.+.||+++|+++....+
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~ 118 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNN 118 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCCS
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCcC
Confidence 456677553 2 23345788899999998778888887643 367999999999999999997654211
Q ss_pred eecCCCC-hhHHHHHHHhh
Q 009206 346 VYYGSFN-NSRLSEVMEQN 363 (540)
Q Consensus 346 ~y~G~~~-~~~l~~fi~~~ 363 (540)
...|..+ .++|.++|+.+
T Consensus 119 k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 119 KINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp CBCSCCCCHHHHHHHHHHH
T ss_pred eEEeecCCHHHHHHHHHHH
Confidence 2467666 88899999874
No 331
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.82 E-value=0.00097 Score=61.16 Aligned_cols=56 Identities=9% Similarity=0.082 Sum_probs=42.5
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.|| +.||+.|..-.|.+.++.++++... .|..|.++........+++++
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~ 107 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQG 107 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 3567888887 9999999999999999999998654 777888775444444444443
No 332
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.82 E-value=0.0014 Score=55.31 Aligned_cols=81 Identities=21% Similarity=0.177 Sum_probs=57.2
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhcc-----CceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc-eeee
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWA-----YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK-PVVY 347 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~-----~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~-~~~y 347 (540)
+++.+|.| .+. |....|.+..++..+.+ .+.|+.++.... .+++ +|.++||+++|++++.. ...|
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~--~v~~~Pt~~~~~~~~~~~~~~~ 99 (121)
T 2djj_A 25 TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---DVPD--EIQGFPTIKLYPAGAKGQPVTY 99 (121)
T ss_dssp TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---CCSS--CCSSSSEEEEECSSCTTSCCCC
T ss_pred CCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---cccc--ccCcCCeEEEEeCcCCCCceEe
Confidence 34555555 332 33346777778888865 677777764432 2554 99999999999876553 5568
Q ss_pred cCCCChhHHHHHHHhh
Q 009206 348 YGSFNNSRLSEVMEQN 363 (540)
Q Consensus 348 ~G~~~~~~l~~fi~~~ 363 (540)
.|..+.+.|.+||+++
T Consensus 100 ~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 100 SGSRTVEDLIKFIAEN 115 (121)
T ss_dssp CCCSCHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHhc
Confidence 9999999999999875
No 333
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.0039 Score=51.70 Aligned_cols=92 Identities=15% Similarity=0.166 Sum_probs=57.5
Q ss_pred hhhhhhhcCCCceEEEEE-eCC---CCCCcHHHHHHHHhh-ccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCC
Q 009206 268 GKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNY-WAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~~---~~~~~~~~~~~A~~~-~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~ 342 (540)
+++.+.....+++.+|.| .+. |....|.+..++..+ ...+.|+.+... ....++++|+|.+.||+++|+++ .
T Consensus 11 ~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~G-~ 87 (112)
T 3d6i_A 11 FTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD--ENSEISELFEISAVPYFIIIHKG-T 87 (112)
T ss_dssp HHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT--TCHHHHHHTTCCSSSEEEEEETT-E
T ss_pred HHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc--cCHHHHHHcCCCcccEEEEEECC-E
Confidence 455554312245656655 332 223456677777764 234667776543 24689999999999999999753 3
Q ss_pred ceeeecCCCChhHHHHHHHhh
Q 009206 343 KPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 343 ~~~~y~G~~~~~~l~~fi~~~ 363 (540)
....+.|. ...+|.++|++.
T Consensus 88 ~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 88 ILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EEEEECSC-CHHHHHHHHHHH
T ss_pred EEEEecCC-CHHHHHHHHHHH
Confidence 33346776 455688888764
No 334
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.81 E-value=0.0013 Score=59.24 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=45.6
Q ss_pred CCCcEEEEEE-ecCCCCcc-CChHHHHHHHHHHhcc-cc-eeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l~~~-~~-v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.|| +.||+.|. .-.|.+.++.++++.. +. |..|+.+........+++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~ 93 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYP 93 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcC
Confidence 4678999999 89999999 8999999999999754 36 88888876555556777777
No 335
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.79 E-value=0.0026 Score=54.62 Aligned_cols=94 Identities=14% Similarity=0.074 Sum_probs=61.5
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
+++.+.+++.+. .+++.+|.| .+. |....|.+..++..+. .+.|+.|... ....++++|+|.+.||+++|
T Consensus 24 l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~i~ 97 (125)
T 1r26_A 24 VYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDAD--NNSEIVSKCRVLQLPTFIIA 97 (125)
T ss_dssp ECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred CCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC--CCHHHHHHcCCCcccEEEEE
Confidence 444233455553 234555555 332 3345677777888773 5777777643 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhh
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+++ .....+.| .+.+.|.++|++.
T Consensus 98 ~~G-~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 98 RSG-KMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 754 33334678 5888899998763
No 336
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.78 E-value=0.0011 Score=57.12 Aligned_cols=85 Identities=19% Similarity=0.264 Sum_probs=57.1
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhcc--CceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCC-ceeeec-C
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWA--YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV-KPVVYY-G 349 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~-~~~~y~-G 349 (540)
+++.+|.|. +. |....|.+..++..+.. .+.|+.+.... ...++++|+|.+.||+++|++++. .++.|. |
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg 102 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA--NDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGG 102 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT--SCCCCSSCCCSSSSEEEEECTTCTTSCEECCSS
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc--CHHHHhhcCCCcCCEEEEEeCCCcccceEecCC
Confidence 456666663 22 22345667778887763 45555554322 245778899999999999987654 344577 5
Q ss_pred CCChhHHHHHHHhhc
Q 009206 350 SFNNSRLSEVMEQNK 364 (540)
Q Consensus 350 ~~~~~~l~~fi~~~~ 364 (540)
..+.+.|.+||+.+.
T Consensus 103 ~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 103 NRDLEHLSKFIDEHA 117 (133)
T ss_dssp CCSTTHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHhc
Confidence 588899999998864
No 337
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.78 E-value=0.00027 Score=60.52 Aligned_cols=68 Identities=12% Similarity=0.290 Sum_probs=45.6
Q ss_pred ccccccCCCcEEEEEEecCCCCccCC-hHHHHHHHHHHhcccceeeeeccchh----hhhHHHHhCCCCccceeeeeeEE
Q 009206 146 FPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSL 220 (540)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~~~v~~Vdc~~~~----~~~~l~~~~~~~~~~~V~~~Ptl 220 (540)
+++.+.... ++.|++|||++|+++ .+.+++.+. ....+..+|+++++ ....|.+.++ +.++|++
T Consensus 18 ~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g------~~tvP~v 86 (118)
T 3c1r_A 18 VKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEING------QRTVPNI 86 (118)
T ss_dssp HHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhC------CCCcCEE
Confidence 444454443 556999999999988 777665431 22467888888553 2234777777 8899987
Q ss_pred EEeCCC
Q 009206 221 VAFPPG 226 (540)
Q Consensus 221 ~~f~~g 226 (540)
|.+|
T Consensus 87 --fi~g 90 (118)
T 3c1r_A 87 --YING 90 (118)
T ss_dssp --EETT
T ss_pred --EECC
Confidence 5566
No 338
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.76 E-value=0.0038 Score=55.56 Aligned_cols=103 Identities=16% Similarity=0.154 Sum_probs=75.6
Q ss_pred eeEEeCCCCccccccCCCcEEEEEEe-cCCCCccCChHHHHHHHHHHhcccceeeeec--cchhhhhHHHHhCCCCccce
Q 009206 137 AFNVVTSEDFPSIFHDSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVEL--GDIRLATHLAERKPIGQIFF 213 (540)
Q Consensus 137 ~V~~lt~~~F~~~v~~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc--~~~~~~~~l~~~~~~~~~~~ 213 (540)
-|.++|.+|...+..+.-+..+.++. +--..-..+.+.+.++|+.++|.+.++.||. +++. .+.+.+|
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~---~~l~~fG------ 85 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQ---RILEFFG------ 85 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGH---HHHHHTT------
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHH---HHHHHcC------
Confidence 47889999988777776666555444 3333445678999999999999999999998 4333 3678888
Q ss_pred eee--eeEEEEeCC-CCCCCCCcccc---cCCCCHHHHHHHHHHhh
Q 009206 214 RRG--LPSLVAFPP-GCKSSDCMTRF---EGELSVDAVTDWFATAI 253 (540)
Q Consensus 214 V~~--~Ptl~~f~~-g~~~~~~~~~y---~G~~~~~~i~~fi~~~v 253 (540)
+.+ +|+++++.. +.. ..| .|..+.+.|.+|+.+.+
T Consensus 86 l~~~~~P~v~i~~~~~~~-----~Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 86 LKKEECPAVRLITLEEEM-----TKYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp CCGGGCSEEEEEECSSSC-----EEECCSCCCCCHHHHHHHHHHHH
T ss_pred CCcccCCEEEEEeccccc-----ccCCCCcccCCHHHHHHHHHHHH
Confidence 654 999999864 211 223 38899999999998874
No 339
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.76 E-value=0.001 Score=60.02 Aligned_cols=55 Identities=13% Similarity=0.069 Sum_probs=41.5
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~ 97 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEG 97 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcC
Confidence 4578999998 899999999999999999988 445788888875443333444444
No 340
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.73 E-value=0.0033 Score=49.14 Aligned_cols=77 Identities=17% Similarity=0.262 Sum_probs=55.3
Q ss_pred eEEEEEe----CCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 009206 280 VKVIFFS----KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (540)
Q Consensus 280 ~~vv~f~----~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~ 355 (540)
+.++.|. ..+....+.+..++..+.+.+.+..++..+ ...++++|||.+.|++++ + +.. .+.|..+.+.
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~-G~~--~~~G~~~~~~ 76 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME--NPQKAMEYGIMAVPTIVI--N-GDV--EFIGAPTKEA 76 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS--SCCTTTSTTTCCSSEEEE--T-TEE--ECCSSSSSHH
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC--CHHHHHHCCCcccCEEEE--C-CEE--eeecCCCHHH
Confidence 4455552 334555678888888887677777776543 246889999999999988 3 322 5788888899
Q ss_pred HHHHHHhh
Q 009206 356 LSEVMEQN 363 (540)
Q Consensus 356 l~~fi~~~ 363 (540)
|.+++++.
T Consensus 77 l~~~l~~~ 84 (85)
T 1fo5_A 77 LVEAIKKR 84 (85)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998763
No 341
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.73 E-value=0.0019 Score=56.31 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=52.3
Q ss_pred CcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..+.+..++..+.+.+.|+.++... ...++++|+|.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 68 ~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 68 VSPILEELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVLFRRG-APVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEEEeCC-cEEEEEeCCCCHHHHHHHHHHH
Confidence 3566777888886667777776432 3689999999999999999754 3334578988899999999864
No 342
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.71 E-value=0.0021 Score=54.18 Aligned_cols=80 Identities=14% Similarity=0.213 Sum_probs=52.1
Q ss_pred ceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeecc----ccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC
Q 009206 279 KVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREE----ESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS 350 (540)
Q Consensus 279 ~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~----~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~ 350 (540)
++.+|.| .+. |....|.+..++..+.. .+.++..... ....++++|+|.+.||+++|+++. ....+.|.
T Consensus 30 ~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~-~~~~~~G~ 106 (118)
T 1zma_A 30 ETATFFIGRKTCPYCRKFAGTLSGVVAETKA--HIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQ-INVRCDSS 106 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHHCC--CCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTE-EEEECCTT
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHhcCC--eEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCE-EEEEecCC
Confidence 3555555 332 23345667777776643 3444533221 125788999999999999998543 33457898
Q ss_pred CChhHHHHHHH
Q 009206 351 FNNSRLSEVME 361 (540)
Q Consensus 351 ~~~~~l~~fi~ 361 (540)
.+.+.|.+||+
T Consensus 107 ~~~~~l~~~l~ 117 (118)
T 1zma_A 107 MSAQEIKDFAG 117 (118)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHhh
Confidence 89999999985
No 343
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.70 E-value=0.0027 Score=61.29 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=66.1
Q ss_pred CCCcEEEEEEe-cCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 009206 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERK-------PI------------GQ 210 (540)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (540)
.+++++|.||+ .||+.|..-.|.+.++.++++... .|..|+++........++++ ++ .+
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 46789999999 999999999999999999997653 77788887544333334332 11 12
Q ss_pred cceee------eeeEEEEeC-CCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 211 IFFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~------~~Ptl~~f~-~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|.+. .+|+.+++- +|.. ...+.| .++.+.+++.+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I----~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVL----RQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeE----EEEEecCCCCCCCHHHHHHHHHHh
Confidence 34476 689998885 4432 122222 56788888887654
No 344
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=96.70 E-value=0.0017 Score=59.90 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=29.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhccc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA 186 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~ 186 (540)
..++.+++|+.+||++|..+.|.+.++.+.+.+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v 58 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDV 58 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTE
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCce
Confidence 45678999999999999999999999888765433
No 345
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.69 E-value=0.0034 Score=52.69 Aligned_cols=95 Identities=15% Similarity=0.228 Sum_probs=59.5
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
+++.+.+++.+... .+++.+|.| .+.| ....+.+..++..+ .+.|+.+... ....++++|+|.+.||+++|
T Consensus 18 l~~~~~~~~~l~~~-~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 18 LKQDGDLESLLEQH-KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD--KLEETARKYNISAMPTFIAI 92 (117)
T ss_dssp CCSTTHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT--TSHHHHHHTTCCSSSEEEEE
T ss_pred eCCHHHHHHHHHhC-CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC--ccHHHHHHcCCCccceEEEE
Confidence 34423245555532 234556655 3322 22346666677766 5666666532 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhh
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+++ .....+.| .+.+.|.++|++.
T Consensus 93 ~~G-~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 93 KNG-EKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-cEEEEEeC-CCHHHHHHHHHHh
Confidence 754 33334678 5888899998763
No 346
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=96.68 E-value=0.0054 Score=55.54 Aligned_cols=97 Identities=8% Similarity=-0.109 Sum_probs=65.3
Q ss_pred CCCcEEEEEEecCCC-CccCChHHHHHHHHHHhc---ccceeeeeccc----------------------------hhhh
Q 009206 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEG---IANTGMVELGD----------------------------IRLA 199 (540)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~l~p~~~~~A~~l~~---~~~v~~Vdc~~----------------------------~~~~ 199 (540)
.+++++|.||+.||+ .|....|.+.++.+++.. .+.+..|.++. ....
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~ 106 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDL 106 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHH
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHH
Confidence 378999999999998 599999999999999853 23555565541 1122
Q ss_pred hHHHHhCCCCc---cceeeeeeEEEEeC-CCCCCCCCcccccCC-CCHHHHHHHHHHh
Q 009206 200 THLAERKPIGQ---IFFRRGLPSLVAFP-PGCKSSDCMTRFEGE-LSVDAVTDWFATA 252 (540)
Q Consensus 200 ~~l~~~~~~~~---~~~V~~~Ptl~~f~-~g~~~~~~~~~y~G~-~~~~~i~~fi~~~ 252 (540)
..+++.+|+.- .+.+...|++.++- +|.. ...|.|. .+.++|...+.+.
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i----~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 107 FKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI----KDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHHHHTTCCCEEETTEEECCCEEEEECTTSBE----EEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHHCCeEEecCCCccccCceEEEECCCCeE----EEEEeCCCCCHHHHHHHHHHh
Confidence 34566655321 13356778888885 4432 2345664 6789999988876
No 347
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=96.68 E-value=0.00077 Score=54.42 Aligned_cols=72 Identities=6% Similarity=0.028 Sum_probs=47.9
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc-----chh-hhhHHHHhCCCCccceeeeeeEEEEeCCCCCCC
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~-----~~~-~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~ 230 (540)
++.|++|||++|++..+.+++.. ..+-.+|.+ +.+ ....+.+.++ +.++|+|++ +|.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g------~~~vP~l~~--~g~--- 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISG------SYSVPVVVK--GDK--- 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHS------SSCSCEEEE--TTE---
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcC------CCCcCEEEE--CCE---
Confidence 56688999999999887777653 233345544 111 1234667777 789999987 552
Q ss_pred CCcccccCCCCHHHHHHHHH
Q 009206 231 DCMTRFEGELSVDAVTDWFA 250 (540)
Q Consensus 231 ~~~~~y~G~~~~~~i~~fi~ 250 (540)
.-|..+.+.|.+++.
T Consensus 77 -----~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 -----HVLGYNEEKLKELIR 91 (92)
T ss_dssp -----EEESCCHHHHHHHHH
T ss_pred -----EEeCCCHHHHHHHhc
Confidence 134568899888864
No 348
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=96.67 E-value=0.0019 Score=54.74 Aligned_cols=93 Identities=12% Similarity=0.073 Sum_probs=61.2
Q ss_pred ccchhhhhhhhhcCCCceEEEEEeC-CC---CCCcHHHHHHHHhhccCceEEEEEeeccc--cHHHHHHcCCCC-CCEEE
Q 009206 263 TKESMGKNFLAKTGPHKVKVIFFSK-TG---ERASPFVRQISRNYWAYASFAFVLWREEE--SSIWWNTFEVES-APAIV 335 (540)
Q Consensus 263 ~~~~~~~~fl~~~~~~~~~vv~f~~-~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~--~~~l~~~f~V~~-~Ptlv 335 (540)
++.+.++++++. +++.+|+|.. .| ....+.+...+.. +.+.|.+|.+.+.. +..++.+|||++ -|+++
T Consensus 12 ~s~e~f~~ii~~---~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~i 86 (112)
T 3iv4_A 12 SSIDQFEQVIEE---NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAF 86 (112)
T ss_dssp CSHHHHHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEE
T ss_pred CCHHHHHHHHhc---CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeEE
Confidence 333335666664 3577777754 22 1223455555553 57889999875432 145899999996 89999
Q ss_pred EEeCCCCceeeecCCCChhHHHHHH
Q 009206 336 FLKDPGVKPVVYYGSFNNSRLSEVM 360 (540)
Q Consensus 336 ~fk~~~~~~~~y~G~~~~~~l~~fi 360 (540)
+|+++...-..-++.++.+.|.+.+
T Consensus 87 l~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 87 YFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEECCEEEEEeeccccCHHHHHHhh
Confidence 9998765444457888888887654
No 349
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.67 E-value=0.0016 Score=56.57 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=62.3
Q ss_pred cccchhhhhhhhhcCCCceEEEEE----eCCCCCCcHHHHHHHHhhcc-CceEEEEEeeccccHHHHHHcCCC------C
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF----SKTGERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVE------S 330 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f----~~~~~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~~~~l~~~f~V~------~ 330 (540)
++..+ +++.+... ..++.+|.| +..|....|.+..++..|.+ .+.|+.|... +...++++|+|. +
T Consensus 12 l~~~~-f~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 12 FNDKT-IDEELERD-KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG--RYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CCTTH-HHHHHHHS-TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT--TCHHHHHHTTCCCCSSSSC
T ss_pred ccHhh-HHHHHhcC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc--cCHHHHHHccCcccCCcCC
Confidence 44444 45555443 234555555 33456678888888988864 5666666432 346899999999 9
Q ss_pred CCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 331 APAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 331 ~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
.||+++|+++ .....+.|..+.+.|.+|+.+
T Consensus 88 ~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 88 LPTLILFQGG-KEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSEEEEESSS-SEEEEESCBCSSSCBCCCCCC
T ss_pred CCEEEEEECC-EEEEEecCcCchHHHHHHHhc
Confidence 9999999754 333346777776666666544
No 350
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.66 E-value=0.00094 Score=52.38 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=47.1
Q ss_pred EEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhh-hhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCccc
Q 009206 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (540)
Q Consensus 157 lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~-~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~ 235 (540)
++.|+++||++|+++.+.+++. + ..+..+|+++++. ...+.+.++ +.++|++. .+|..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-----~-i~~~~~~i~~~~~~~~~~~~~~~------~~~vP~l~--~~g~~------- 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK-----G-VSFQELPIDGNAAKREEMIKRSG------RTTVPQIF--IDAQH------- 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEECTTCSHHHHHHHHHHS------SCCSCEEE--ETTEE-------
T ss_pred EEEEECCCChhHHHHHHHHHHC-----C-CCcEEEECCCCHHHHHHHHHHhC------CCCcCEEE--ECCEE-------
Confidence 5678999999999988877764 2 3567778775432 233566677 88999984 35531
Q ss_pred ccCCCCHHHHHHHHHH
Q 009206 236 FEGELSVDAVTDWFAT 251 (540)
Q Consensus 236 y~G~~~~~~i~~fi~~ 251 (540)
..| .++|..++.+
T Consensus 62 i~g---~~~i~~~~~~ 74 (82)
T 1fov_A 62 IGG---YDDLYALDAR 74 (82)
T ss_dssp EES---HHHHHHHHHT
T ss_pred EeC---HHHHHHHHHC
Confidence 122 3567776644
No 351
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.62 E-value=0.0022 Score=60.94 Aligned_cols=84 Identities=14% Similarity=0.268 Sum_probs=61.2
Q ss_pred CceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.| .+- |....|.+..++..|.+.+.|+.|.... ...++++|+|.+.||+++|++ +.....+.|..+.
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 106 (222)
T 3dxb_A 30 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 106 (222)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEEEEC-CeEEEEeccccCh
Confidence 34556655 332 2334677788888887777777776433 357899999999999999985 3334457899999
Q ss_pred hHHHHHHHhhc
Q 009206 354 SRLSEVMEQNK 364 (540)
Q Consensus 354 ~~l~~fi~~~~ 364 (540)
+.|.+||+...
T Consensus 107 ~~l~~~l~~~l 117 (222)
T 3dxb_A 107 GQLKEFLDANL 117 (222)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhhc
Confidence 99999998753
No 352
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=96.61 E-value=0.0037 Score=60.93 Aligned_cols=98 Identities=13% Similarity=0.022 Sum_probs=64.8
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHHhC-------CC------------Cc
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAERK-------PI------------GQ 210 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~~~-------~~------------~~ 210 (540)
.+++++|.|| +.||+.|..-.|.+.++.++++... .|..|+++........++++ ++ .+
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 4678899998 9999999999999999999997653 78888887544333344332 11 12
Q ss_pred cceee------eeeEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 211 ~~~V~------~~Ptl~~f~~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
.|.|. .+|+.+++-...+ ....+.| .++.+.++..+...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~---I~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGI---LRQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSB---EEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCe---EEEEEecCCCCCCCHHHHHHHHHhh
Confidence 33464 5799888854332 1122222 56788888877553
No 353
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.56 E-value=0.0037 Score=60.07 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=58.6
Q ss_pred ceEEEEE-eC---CCCCCcHHHHHHHHhhcc---CceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc----eeee
Q 009206 279 KVKVIFF-SK---TGERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK----PVVY 347 (540)
Q Consensus 279 ~~~vv~f-~~---~~~~~~~~~~~~A~~~~~---~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~----~~~y 347 (540)
++.+|.| .+ .|....|.+..++..+.+ .+.|+.|+........++++|+|.++||+++|+++... ...+
T Consensus 31 ~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~ 110 (244)
T 3q6o_A 31 SAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPV 110 (244)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCC
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEec
Confidence 4555545 33 233456788888888876 67777776543345789999999999999999975432 2234
Q ss_pred cCCCChhHHHHHHHhh
Q 009206 348 YGSFNNSRLSEVMEQN 363 (540)
Q Consensus 348 ~G~~~~~~l~~fi~~~ 363 (540)
.| .+.+.|.++|.+.
T Consensus 111 ~g-~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 111 AG-ADVQTLRERLIDA 125 (244)
T ss_dssp TT-CCHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHH
Confidence 55 5888888888664
No 354
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.56 E-value=0.0031 Score=53.90 Aligned_cols=67 Identities=10% Similarity=0.101 Sum_probs=45.9
Q ss_pred HHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhhcc
Q 009206 299 ISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKL 365 (540)
Q Consensus 299 ~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~~~ 365 (540)
++..+...+.+..+.........++++|+|.+.|++++|...+.....+.|..+.+.|.++|+....
T Consensus 55 ~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 55 VADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVE 121 (130)
T ss_dssp HHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHS
T ss_pred HHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHH
Confidence 3333333455555543322346799999999999999995445444457898899999999987543
No 355
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.56 E-value=0.0051 Score=48.06 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=52.2
Q ss_pred CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 288 ~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
.+....+.+..++..+.+.+.+..++..+ ...++++|||.+.|++++ + +.. .+.|..+.+.|.+++++.
T Consensus 15 ~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~-G~~--~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 15 YCPMAIEVVDEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMAVPAIAI--N-GVV--RFVGAPSREELFEAINDE 83 (85)
T ss_dssp CSTTHHHHHHHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSCSSEEEE--T-TTE--EEECSSCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhCCceeeCEEEE--C-CEE--EEccCCCHHHHHHHHHHH
Confidence 34556778888888887677888776433 357899999999999998 3 332 578887889999999764
No 356
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.55 E-value=0.0052 Score=54.55 Aligned_cols=97 Identities=13% Similarity=0.190 Sum_probs=61.6
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
+++.+.+++.+... .+++.+|.| .+. |....|.+..++..+ ..+.|+.|.... ...++++|+|.+.|++++|
T Consensus 17 l~~~~~~~~~~~~~-~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 92 (153)
T 2wz9_A 17 VGSAGQFEELLRLK-AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEG--VPEVSEKYEISSVPTFLFF 92 (153)
T ss_dssp ECSHHHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 33333355556543 134556655 332 223456667777776 356777776432 3679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhhc
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~~ 364 (540)
+ ++.....+.| .+.+.|.+||++..
T Consensus 93 ~-~G~~~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 93 K-NSQKIDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp E-TTEEEEEEES-SCHHHHHHHHHHHS
T ss_pred E-CCEEEEEEeC-CCHHHHHHHHHHHh
Confidence 9 4443334567 47788999998753
No 357
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.52 E-value=0.00067 Score=63.22 Aligned_cols=43 Identities=7% Similarity=-0.007 Sum_probs=35.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~ 194 (540)
..++.+|+|+++||+||+++.|.++++++.+.+.+.+..+...
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 4688999999999999999999999998877665566666654
No 358
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.49 E-value=0.0011 Score=60.12 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=48.3
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEE
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl 220 (540)
.+++++|.|| +.||+.|....|.+.++.+++ ..+.+..|+++........+++++ +..+|.+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~------~~~~~~l 108 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFN------IQNVTVA 108 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTT------CCSSEEE
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcC------CCCeEEe
Confidence 3678999998 899999999999999998888 445788888886555556777777 5456643
No 359
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.49 E-value=0.0038 Score=54.21 Aligned_cols=69 Identities=22% Similarity=0.242 Sum_probs=52.0
Q ss_pred CcHHHHHHHHhhccCceEEEEEeec-------cccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 292 ASPFVRQISRNYWAYASFAFVLWRE-------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~-------~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..|.+..++..+. +.|+.|...+ .....++++|+|.+.||+++|++ +.....+.|..+.+.+.++++..
T Consensus 49 ~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~-G~~v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 49 DWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKE-GRIVDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp HHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred hChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcC-CEEEEEEeCCCCHHHHHHHHHHH
Confidence 4567777777764 7788877622 22367999999999999999994 44444578998999999998874
No 360
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.49 E-value=0.0014 Score=59.68 Aligned_cols=61 Identities=11% Similarity=0.086 Sum_probs=47.9
Q ss_pred CCcEEEEEEecCCCCccCC-hHHHHHHHHHHhccc-c-eeeeeccchhhhhHHHHhCCCCccceee-eeeE
Q 009206 153 SKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKPIGQIFFRR-GLPS 219 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~~-~-v~~Vdc~~~~~~~~l~~~~~~~~~~~V~-~~Pt 219 (540)
..++|+.|++.||+.|..- .|.+.++..+++... . |..|+.++.......+++++ +. .||.
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~------~~~~fp~ 108 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ------AKDAIEF 108 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT------CTTTSEE
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC------CCCceEE
Confidence 3578889999999999986 999999999987543 6 88888886555566778877 63 6773
No 361
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=96.48 E-value=0.0017 Score=57.83 Aligned_cols=87 Identities=15% Similarity=0.198 Sum_probs=57.8
Q ss_pred cCCCcEEEEEEecCCCCccCChHHHHHHHHHHhccc---ce------------------------------e-----eee
Q 009206 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA---NT------------------------------G-----MVE 192 (540)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~---~v------------------------------~-----~Vd 192 (540)
.+.+..+|.|..++|++|+++.+.++++.+ +.=.. .+ + .-.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l~~-v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~~~~ 90 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKMTD-VTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSI 90 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTCCS-EEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTTCCC
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhcCc-eEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCccHH
Confidence 467889999999999999999988776411 00000 00 0 011
Q ss_pred ccc-hhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 193 LGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 193 c~~-~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
|.. -.....+++++| |+|+||+++ .+|. .+.|..+.+.|.+++.+.
T Consensus 91 ~~~~v~~~~~la~~~g------I~gtPt~vi-~nG~-------~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 91 CDNPVAETTSLGEQFG------FNGTPTLVF-PNGR-------TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp CSCSHHHHHHHHHHTT------CCSSCEEEC-TTSC-------EEESCCCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhC------CCccCEEEE-ECCE-------EeeCCCCHHHHHHHHHHH
Confidence 221 112234777887 999999988 5563 457989999999998776
No 362
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.43 E-value=0.0031 Score=52.24 Aligned_cols=75 Identities=7% Similarity=0.050 Sum_probs=47.1
Q ss_pred CcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccc--h---hh-hhHHHHhCCCCccceeeeeeEEEEeCCCC
Q 009206 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--I---RL-ATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (540)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~--~---~~-~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~ 227 (540)
..-++.|+++||++|++..+.+++..- .+-.+|.+. . +. ...+.+..+ +.++|+|++ +|.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~i------~y~~vdI~~~~~~~~~~~~~~l~~~~g------~~~vP~l~i--~~~ 86 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLGV------DFDYVYVDRLEGKEEEEAVEEVRRFNP------SVSFPTTII--NDE 86 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHTB------CEEEEEGGGCCHHHHHHHHHHHHHHCT------TCCSCEEEE--TTT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCC------CcEEEEeeccCcccHHHHHHHHHHhCC------CCccCEEEE--CCC
Confidence 344677999999999999988876532 344455542 1 11 111233456 789999876 331
Q ss_pred CCCCCcccccCCCCHHHHHHHH
Q 009206 228 KSSDCMTRFEGELSVDAVTDWF 249 (540)
Q Consensus 228 ~~~~~~~~y~G~~~~~~i~~fi 249 (540)
.+-|..+.+.|.+++
T Consensus 87 -------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 -------KAIVGFKEKEIRESL 101 (103)
T ss_dssp -------EEEESCCHHHHHHHT
T ss_pred -------EEEEcCCHHHHHHHh
Confidence 235777888877664
No 363
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.42 E-value=0.0011 Score=53.42 Aligned_cols=57 Identities=18% Similarity=0.245 Sum_probs=40.2
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhh-hhHHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~-~~~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
-++.|++|||++|+++.+.+++. + ..+..+|+++++. ...+.+.++ +.++|++ |.+|
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-----~-i~~~~~di~~~~~~~~~l~~~~~------~~~vP~l--~~~g 64 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-----G-AEFNEIDASATPELRAEMQERSG------RNTFPQI--FIGS 64 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-----T-CCCEEEESTTSHHHHHHHHHHHT------SSCCCEE--EETT
T ss_pred cEEEEECCCChhHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHHhC------CCCcCEE--EECC
Confidence 36789999999999888777654 1 3577788875433 233566677 8899976 4455
No 364
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.41 E-value=0.0067 Score=51.77 Aligned_cols=81 Identities=16% Similarity=0.203 Sum_probs=53.5
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCCh
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~ 353 (540)
+++.+|.|. +. |....+.+..++..+. .+.|..+... ....++++|+|.+.||+++|+++. ....+.| .+.
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G-~~~ 112 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD--ELKSVASDWAIQAMPTFMFLKEGK-ILDKVVG-AKK 112 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TSHHHHHHTTCCSSSEEEEEETTE-EEEEEES-CCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc--cCHHHHHHcCCCccCEEEEEECCE-EEEEEeC-CCH
Confidence 346666553 32 2223566677777764 4556555432 346899999999999999997543 3334677 488
Q ss_pred hHHHHHHHhh
Q 009206 354 SRLSEVMEQN 363 (540)
Q Consensus 354 ~~l~~fi~~~ 363 (540)
+.|.++|++.
T Consensus 113 ~~l~~~l~~~ 122 (124)
T 1xfl_A 113 DELQSTIAKH 122 (124)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8899998763
No 365
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=96.37 E-value=0.0017 Score=63.13 Aligned_cols=88 Identities=10% Similarity=-0.031 Sum_probs=61.8
Q ss_pred cEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhh------------------------hhHHHHhCCCC
Q 009206 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------------ATHLAERKPIG 209 (540)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~------------------------~~~l~~~~~~~ 209 (540)
.+|+.|+++||+.|....|.+.+++.+++.. +.|..|+++.... ...+++.|+
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~yg-- 113 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLG-- 113 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHT--
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhC--
Confidence 4566789999999999999999999999865 4788888874321 123555555
Q ss_pred ccceee-------eeeEEEEeC-CCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 009206 210 QIFFRR-------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (540)
Q Consensus 210 ~~~~V~-------~~Ptl~~f~-~g~~~~~~~~~y~G----~~~~~~i~~fi~~~ 252 (540)
|. ++|++.++- +|.. ...+.| .|+.+.|...+...
T Consensus 114 ----v~~~~~g~~~~p~~fIID~dG~I----~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 114 ----LLHAESATHTVRGVFIVDARGVI----RTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp ----CCCTTCSSSCCEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ----CccccCCCcccceEEEECCCCeE----EEEEecCCcccchhHHHHHHHHHH
Confidence 65 899988885 4532 122223 36788888887654
No 366
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.36 E-value=0.007 Score=52.31 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=46.5
Q ss_pred HHHHHhhccCceEEEEEeec--cccHHHHHHcCCCCCCEEEEEeCCCCce--eeecCCCChhHHHHHHHh
Q 009206 297 RQISRNYWAYASFAFVLWRE--EESSIWWNTFEVESAPAIVFLKDPGVKP--VVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 297 ~~~A~~~~~~~~f~~v~~~~--~~~~~l~~~f~V~~~Ptlv~fk~~~~~~--~~y~G~~~~~~l~~fi~~ 362 (540)
..++..+. .+.+..|.... .....++++|+|.+.|++++|...+... ..+.|..+.+.|.++++.
T Consensus 57 ~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 57 PQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp HHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred HHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 44555554 36777776532 2236799999999999999994334332 357899999999999976
No 367
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.34 E-value=0.0025 Score=57.87 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=44.6
Q ss_pred CCCcEEEEEE-ecCCCCccC-ChHHHHHHHHHHhcc-c-ceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~-l~p~~~~~A~~l~~~-~-~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.|| +.||+.|.. -.|.+.++.++++.. + .|..|+.+........+++.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~ 89 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHG 89 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 4567888887 999999998 899999999988653 5 788888876555556778877
No 368
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.31 E-value=0.0022 Score=60.10 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=45.4
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeee
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~P 218 (540)
.+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|+++........+++++ +..||
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~------~~~f~ 137 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEG------LSNVI 137 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTT------CTTEE
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcC------CCCce
Confidence 4678999998 789999999999999999988 335788888875544444455555 54566
No 369
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.30 E-value=0.0011 Score=59.50 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=43.7
Q ss_pred CCCcEEEEEEe-cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.||+ .||++|....|.+.++.+++ ..+.+..|+++........+++++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~ 96 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEG 96 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcC
Confidence 46789999994 99999999999999998888 445788888876555555677766
No 370
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.29 E-value=0.0067 Score=50.11 Aligned_cols=91 Identities=21% Similarity=0.285 Sum_probs=56.8
Q ss_pred hhhhhhhc-CCCceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCC
Q 009206 268 GKNFLAKT-GPHKVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (540)
Q Consensus 268 ~~~fl~~~-~~~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~ 342 (540)
+++.+... ..+++.+|.|. +.| ....+.+..++..+. .+.|..+... ....++++|+|.+.|++++|+++ .
T Consensus 15 ~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G-~ 90 (113)
T 1ti3_A 15 WKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD--ELKAVAEEWNVEAMPTFIFLKDG-K 90 (113)
T ss_dssp HHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TCHHHHHHHHCSSTTEEEEEETT-E
T ss_pred HHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc--ccHHHHHhCCCCcccEEEEEeCC-E
Confidence 44555432 13456666554 322 223455666777664 4556655532 34689999999999999999754 3
Q ss_pred ceeeecCCCChhHHHHHHHhh
Q 009206 343 KPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 343 ~~~~y~G~~~~~~l~~fi~~~ 363 (540)
....+.| .+.+.|.++|++.
T Consensus 91 ~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 91 LVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EEEEEEC-CCTTHHHHHHHHH
T ss_pred EEEEEec-CCHHHHHHHHHHh
Confidence 2233567 5788899998763
No 371
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.29 E-value=0.00066 Score=55.37 Aligned_cols=81 Identities=16% Similarity=0.233 Sum_probs=54.8
Q ss_pred ceEEEEEe----CCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFFS----KTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f~----~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.+++|. ..|....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|++ +.....+.|..+.+
T Consensus 20 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-g~~~~~~~g~~~~~ 96 (106)
T 2yj7_A 20 KPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE--NPNTAAQYGIRSIPTLLLFKN-GQVVDRLVGAQPKE 96 (106)
Confidence 45555552 234445666777777776556666665432 357999999999999999964 33333567887888
Q ss_pred HHHHHHHh
Q 009206 355 RLSEVMEQ 362 (540)
Q Consensus 355 ~l~~fi~~ 362 (540)
.|.+|+++
T Consensus 97 ~l~~~l~~ 104 (106)
T 2yj7_A 97 ALKERIDK 104 (106)
Confidence 88888865
No 372
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.28 E-value=0.0076 Score=53.46 Aligned_cols=93 Identities=15% Similarity=0.204 Sum_probs=62.3
Q ss_pred hhhhhhhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+++.+... .+++.+|.| .+ .|....|.+..++..|.+.+.|+.|+... ...++++|+|.+.||+++++++...
T Consensus 14 ~~~~i~~~-~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~v 90 (149)
T 3gix_A 14 VDQAIKST-AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ--TAVYTQYFDISYIPSTVFFFNGQHM 90 (149)
T ss_dssp HHHHHHHC-CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT--CCHHHHHTTCCSSSEEEEEETTEEE
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc--CHHHHHHcCCCccCeEEEEECCeEE
Confidence 44444321 245666655 33 23335677778888887767777776432 3679999999999999999875432
Q ss_pred e--------eeecC-CCChhHHHHHHHhh
Q 009206 344 P--------VVYYG-SFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~--------~~y~G-~~~~~~l~~fi~~~ 363 (540)
. ..+.| ..+.++|.++|+..
T Consensus 91 ~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 91 KVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred EeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 1 23577 67888999998764
No 373
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.27 E-value=0.00065 Score=63.07 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=34.9
Q ss_pred CCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeecc
Q 009206 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~ 194 (540)
.++.+|+|++.||+||+++.|.+ .++++.+.+.+++..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 46899999999999999999986 6777777666677777766
No 374
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.23 E-value=0.014 Score=48.26 Aligned_cols=96 Identities=14% Similarity=0.156 Sum_probs=59.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
++.++ +++.+... .+++.+|.| .+.| ....|.+..++..+. .+.|+.+...+ ....++++|+|.+.||++++
T Consensus 10 l~~~~-~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 85 (111)
T 2pu9_C 10 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 85 (111)
T ss_dssp ECTTT-HHHHHTTC-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSBSSEEEEE
T ss_pred echHH-HHHHHHhc-CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 44434 44555432 234555555 3322 223566677777775 36677776432 24689999999999999988
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhh
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+++. ....+.|. +.+.|.++|+..
T Consensus 86 ~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 86 KENS-VVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp SSSS-EEEEEESS-CHHHHHHHHHHH
T ss_pred eCCc-EEEEEcCC-CHHHHHHHHHHh
Confidence 7543 33346776 578899998763
No 375
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.22 E-value=0.0027 Score=58.79 Aligned_cols=55 Identities=13% Similarity=0.106 Sum_probs=42.6
Q ss_pred CCcE-EEEEEecCCCCccC-ChHHHHHHHHHHhccc-c-eeeeeccchhhhhHHHHhCC
Q 009206 153 SKPW-LIQVYSDGSYLCGQ-FSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 153 ~~~~-lV~FYapwC~~C~~-l~p~~~~~A~~l~~~~-~-v~~Vdc~~~~~~~~l~~~~~ 207 (540)
++++ |+.|++.||+.|.. -.|.+.+++++++..+ . |..|+.++.......+++++
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~ 114 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSG 114 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhC
Confidence 4544 45555999999999 5999999999997654 6 88999886655566777776
No 376
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.19 E-value=0.0048 Score=53.00 Aligned_cols=84 Identities=10% Similarity=0.105 Sum_probs=55.1
Q ss_pred ceEEEEEe-CC---CCCCcHHHH--HHHHhhccCceEEEEEeec-cccHHHHHHcCC---CCCCEEEEEeCCCCceeeec
Q 009206 279 KVKVIFFS-KT---GERASPFVR--QISRNYWAYASFAFVLWRE-EESSIWWNTFEV---ESAPAIVFLKDPGVKPVVYY 348 (540)
Q Consensus 279 ~~~vv~f~-~~---~~~~~~~~~--~~A~~~~~~~~f~~v~~~~-~~~~~l~~~f~V---~~~Ptlv~fk~~~~~~~~y~ 348 (540)
++.+|.|. +- |....+.+. .++..+.+.+.+..|...+ .....++++|+| .+.|++++|...+.....+.
T Consensus 30 k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~ 109 (133)
T 3fk8_A 30 KPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTK 109 (133)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECC
T ss_pred CcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEec
Confidence 45566553 32 222345566 6666665667777776522 234789999999 99999999944444333445
Q ss_pred C-------CCChhHHHHHHHh
Q 009206 349 G-------SFNNSRLSEVMEQ 362 (540)
Q Consensus 349 G-------~~~~~~l~~fi~~ 362 (540)
| .++.+.|.+|+++
T Consensus 110 g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 110 GGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp SCTTTTGGGSCHHHHHHHHHH
T ss_pred CCcccccccCCHHHHHHHHHH
Confidence 5 4577889999875
No 377
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.17 E-value=0.014 Score=53.66 Aligned_cols=96 Identities=19% Similarity=0.180 Sum_probs=64.5
Q ss_pred cCCCcEEEEEEecCCCCccCChH-HH--HHHHHHHhcccceeeeeccchhh------------hhHHH---HhCCCCccc
Q 009206 151 HDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRL------------ATHLA---ERKPIGQIF 212 (540)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p-~~--~~~A~~l~~~~~v~~Vdc~~~~~------------~~~l~---~~~~~~~~~ 212 (540)
++.++++|.+++|||..|..|.. +| +++.+-++...-+-..|.+.... ...++ +.++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~----- 127 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQK----- 127 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSC-----
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcC-----
Confidence 46899999999999999988762 22 33555666555566777664321 01133 3366
Q ss_pred eeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 213 ~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+.+||++.++..............|..+++.+++-+...
T Consensus 128 -~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 128 -TDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp -STTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred -CCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 899999999864321112345678999999999888665
No 378
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.17 E-value=0.01 Score=51.40 Aligned_cols=90 Identities=11% Similarity=0.162 Sum_probs=55.4
Q ss_pred hhhhhhhcCCCceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEe--CCC
Q 009206 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK--DPG 341 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk--~~~ 341 (540)
++..++.. ..++.+|.|. +- |....+.+..++..+ .+.|+.|.. .....++++|+|.+.||+++|+ ++.
T Consensus 31 ~~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~--~~~~~l~~~~~v~~~Pt~~~~~~~~g~ 105 (133)
T 3cxg_A 31 LNQVFSST-QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDV--DIHPKLNDQHNIKALPTFEFYFNLNNE 105 (133)
T ss_dssp HHHHHTC--CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEET--TTCHHHHHHTTCCSSSEEEEEEEETTE
T ss_pred HHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEec--cchHHHHHhcCCCCCCEEEEEEecCCC
Confidence 45555433 2356666553 32 233455666566554 345555543 2346899999999999999997 433
Q ss_pred C-ceeeecCCCChhHHHHHHHhh
Q 009206 342 V-KPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 342 ~-~~~~y~G~~~~~~l~~fi~~~ 363 (540)
. ....+.|. +.+.|.++|++.
T Consensus 106 g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 106 WVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEEEEEEESC-CHHHHHHHHHHH
T ss_pred eEEEEEEcCC-CHHHHHHHHHHH
Confidence 1 22346776 788999999864
No 379
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.13 E-value=0.048 Score=48.29 Aligned_cols=117 Identities=14% Similarity=0.235 Sum_probs=69.4
Q ss_pred cCCcccccccchhhhhhhhhcCCCceEEEEEeCCCCCC----cHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCC
Q 009206 255 KLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERA----SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES 330 (540)
Q Consensus 255 ~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f~~~~~~~----~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~ 330 (540)
.+|.+..++.++ ...+.... -...+++|....... ...++.+|..|++.+.|+.+.........+.+.||++.
T Consensus 12 ~~PLV~e~t~en-~~~~~~~~--~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~ 88 (147)
T 3bj5_A 12 QLPLVIEFTEQT-APKIFGGE--IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKK 88 (147)
T ss_dssp ---CEEECCTTT-HHHHHSSS--CCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCG
T ss_pred cCCeeEEecccc-HHHHhcCC--CceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCc
Confidence 366666666555 34444322 123334455322222 24456699999999999888753233346889999985
Q ss_pred --CCEEEEEeC-CCCceeee-cCCCChhHHHHHHHhhccCCC-cccccc
Q 009206 331 --APAIVFLKD-PGVKPVVY-YGSFNNSRLSEVMEQNKLQEL-PQLRSV 374 (540)
Q Consensus 331 --~Ptlv~fk~-~~~~~~~y-~G~~~~~~l~~fi~~~~~~~l-p~l~~~ 374 (540)
.|+|+++.. .+.....+ .+.++.+.|.+|+....-..+ |.+-|+
T Consensus 89 ~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSE 137 (147)
T 3bj5_A 89 EECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQ 137 (147)
T ss_dssp GGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCS
T ss_pred ccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCC
Confidence 799999864 22221122 378899999999998655544 333333
No 380
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.11 E-value=0.0081 Score=52.17 Aligned_cols=90 Identities=11% Similarity=0.098 Sum_probs=56.6
Q ss_pred hhhhhhhcCCCceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+.+.+.....+++.+|.|. +- |....|.+..++..|. .+.|+.|...+. .++|+|.+.||+++|+++..
T Consensus 20 ~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~-----~~~~~i~~~Pt~~~~~~G~~- 92 (135)
T 2dbc_A 20 YVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSC-----IEHYHDNCLPTIFVYKNGQI- 92 (135)
T ss_dssp HHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSS-----CSSCCSSCCSEEEEESSSSC-
T ss_pred HHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcC-----cccCCCCCCCEEEEEECCEE-
Confidence 3444443323356666553 32 2334677777888773 466776654433 27899999999999986543
Q ss_pred eeeecCC-------CChhHHHHHHHhhc
Q 009206 344 PVVYYGS-------FNNSRLSEVMEQNK 364 (540)
Q Consensus 344 ~~~y~G~-------~~~~~l~~fi~~~~ 364 (540)
...+.|. ++.+.|.+++.++.
T Consensus 93 v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 93 EGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 3334554 36788999998864
No 381
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.10 E-value=0.0018 Score=59.82 Aligned_cols=40 Identities=13% Similarity=0.217 Sum_probs=34.1
Q ss_pred CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeecc
Q 009206 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~ 194 (540)
+++.+|+|++.||+||+++.|.++++.+.+ + +.+..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~-v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G-TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T-SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C-CeEEEEecc
Confidence 678999999999999999999999999988 3 456666654
No 382
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.06 E-value=0.0044 Score=56.68 Aligned_cols=56 Identities=9% Similarity=0.040 Sum_probs=41.7
Q ss_pred CCCcEEEEEE-ecCCCCcc-CChHHHHHHHHHHhccc-ce-eeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGIA-NT-GMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l~~~~-~v-~~Vdc~~~~~~~~l~~~~~ 207 (540)
.++++++.|| +.||+.|. .-.|.+.+++.+++..+ .+ |.|.++........+++.+
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~ 101 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHK 101 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhC
Confidence 3455555555 99999999 58899999999997654 44 4588876555566788887
No 383
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.05 E-value=0.018 Score=48.62 Aligned_cols=96 Identities=14% Similarity=0.127 Sum_probs=59.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEE
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~f 337 (540)
++.++ +++.+... .+++.+|.|. +. |....|.+..++..+. .+.|..+...+ ....++++|+|.+.||++++
T Consensus 23 l~~~~-~~~~~~~~-~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 98 (124)
T 1faa_A 23 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 98 (124)
T ss_dssp ECTTT-HHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSSSSEEEEE
T ss_pred ecchh-HHHHHHhc-CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 44444 34444432 2345566553 32 2223566677777765 46677766432 24679999999999999999
Q ss_pred eCCCCceeeecCCCChhHHHHHHHhh
Q 009206 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 338 k~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+++. ....+.|.. .+.|.+++++.
T Consensus 99 ~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 99 KENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 7643 333467764 78899998763
No 384
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.04 E-value=0.0094 Score=48.56 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=49.3
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCccc
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~ 235 (540)
-++.|..|||+.|.+.....++. | +.+-.+|.++++.......+...| .+++|+|+ +.+|..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~-----g-i~y~~idi~~d~~~~~~~~~~~~G----~~tVP~I~-i~Dg~~------- 66 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN-----R-IAYDEVDIEHNRAAAEFVGSVNGG----NRTVPTVK-FADGST------- 66 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT-----T-CCCEEEETTTCHHHHHHHHHHSSS----SSCSCEEE-ETTSCE-------
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc-----C-CceEEEEcCCCHHHHHHHHHHcCC----CCEeCEEE-EeCCEE-------
Confidence 35678899999998766544331 1 367788888665544333332112 77999975 455532
Q ss_pred ccCCCCHHHHHHHHHHh
Q 009206 236 FEGELSVDAVTDWFATA 252 (540)
Q Consensus 236 y~G~~~~~~i~~fi~~~ 252 (540)
-+..+.++|.+++.+.
T Consensus 67 -l~~~~~~el~~~L~el 82 (92)
T 2lqo_A 67 -LTNPSADEVKAKLVKI 82 (92)
T ss_dssp -EESCCHHHHHHHHHHH
T ss_pred -EeCCCHHHHHHHHHHh
Confidence 2345788888887765
No 385
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.00 E-value=0.008 Score=51.32 Aligned_cols=79 Identities=10% Similarity=0.162 Sum_probs=54.0
Q ss_pred ceEEEEE-eCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecC-----
Q 009206 279 KVKVIFF-SKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG----- 349 (540)
Q Consensus 279 ~~~vv~f-~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G----- 349 (540)
++.||.| .+- |....|.+..+|.+|. .+.|..|+..++ .++|+|.+.||+++|+++.... .+.|
T Consensus 24 ~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~-----~~~~~v~~~PT~~~fk~G~~v~-~~~G~~~~g 96 (118)
T 3evi_A 24 VWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC-----IQHYHDNCLPTIFVYKNGQIEA-KFIGIIECG 96 (118)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT-----STTCCGGGCSEEEEEETTEEEE-EEESTTTTT
T ss_pred CeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh-----HHHCCCCCCCEEEEEECCEEEE-EEeChhhhC
Confidence 3556655 332 2335678888998884 578888875432 5899999999999999764322 2333
Q ss_pred --CCChhHHHHHHHhhc
Q 009206 350 --SFNNSRLSEVMEQNK 364 (540)
Q Consensus 350 --~~~~~~l~~fi~~~~ 364 (540)
.++.+.|..++.++.
T Consensus 97 g~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 97 GINLKLEELEWKLAEVG 113 (118)
T ss_dssp CSSCCHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHcC
Confidence 357888999987743
No 386
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.99 E-value=0.0026 Score=53.53 Aligned_cols=62 Identities=15% Similarity=0.220 Sum_probs=39.8
Q ss_pred cccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccc----hhh-hhHHHHhCCCCccceeeeeeEEEEe
Q 009206 149 IFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD----IRL-ATHLAERKPIGQIFFRRGLPSLVAF 223 (540)
Q Consensus 149 ~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~----~~~-~~~l~~~~~~~~~~~V~~~Ptl~~f 223 (540)
.+.+++ ++.|++|||++|++..+.+++.. ..+..+|++. .+. ...+.+..| +.++|+| |
T Consensus 15 ~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g------~~tvP~i--f 78 (113)
T 3rhb_A 15 TVTENT--VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTG------QHTVPNV--F 78 (113)
T ss_dssp HHHHSS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHS------CCSSCEE--E
T ss_pred HHhcCC--EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhC------CCCcCEE--E
Confidence 344444 66799999999999888887642 2345566653 122 222455556 7899998 5
Q ss_pred CCC
Q 009206 224 PPG 226 (540)
Q Consensus 224 ~~g 226 (540)
.+|
T Consensus 79 i~g 81 (113)
T 3rhb_A 79 VCG 81 (113)
T ss_dssp ETT
T ss_pred ECC
Confidence 566
No 387
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=95.98 E-value=0.0049 Score=58.59 Aligned_cols=92 Identities=8% Similarity=0.054 Sum_probs=59.8
Q ss_pred hhhhhhhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+.+.+.....++++||.| .+ .|....|.+..+|..|. .+.|+.|... ...++.+|+|.+.||+++|+++. .
T Consensus 110 f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~---~~~l~~~~~i~~~PTl~~~~~G~-~ 184 (217)
T 2trc_P 110 FLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS---NTGAGDRFSSDVLPTLLVYKGGE-L 184 (217)
T ss_dssp HHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH---HHTCSTTSCGGGCSEEEEEETTE-E
T ss_pred HHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC---cHHHHHHCCCCCCCEEEEEECCE-E
Confidence 444454433335656655 33 23334677788888874 6778887653 34588899999999999998543 3
Q ss_pred eeeecCCCC-------hhHHHHHHHhhc
Q 009206 344 PVVYYGSFN-------NSRLSEVMEQNK 364 (540)
Q Consensus 344 ~~~y~G~~~-------~~~l~~fi~~~~ 364 (540)
...+.|..+ .+.|..||.++.
T Consensus 185 v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 185 ISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 334555433 488999998764
No 388
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.95 E-value=0.0078 Score=52.08 Aligned_cols=81 Identities=21% Similarity=0.320 Sum_probs=54.8
Q ss_pred ceEEEEE-eCCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.+|.| .+.| ....+.+..++..+. .+.|..|... ....++++|+|.+.|++++++++ .....+.|. +.+
T Consensus 47 k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~~~ 121 (139)
T 3d22_A 47 KIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVD--ELSDFSASWEIKATPTFFFLRDG-QQVDKLVGA-NKP 121 (139)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TSHHHHHHTTCCEESEEEEEETT-EEEEEEESC-CHH
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCc--ccHHHHHHcCCCcccEEEEEcCC-eEEEEEeCC-CHH
Confidence 4555555 3322 223566677777763 5667776543 24689999999999999999654 333346787 788
Q ss_pred HHHHHHHhhc
Q 009206 355 RLSEVMEQNK 364 (540)
Q Consensus 355 ~l~~fi~~~~ 364 (540)
.|.++|+...
T Consensus 122 ~l~~~l~~~~ 131 (139)
T 3d22_A 122 ELHKKITAIL 131 (139)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 389
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=95.94 E-value=0.0048 Score=50.92 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=42.3
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhh-hHHHHhC-CCCccceeeeeeEEEEeCCC
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERK-PIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~-~~l~~~~-~~~~~~~V~~~Ptl~~f~~g 226 (540)
+...-++.|.+|||+.|++..+.+++.. +.+..+|++.++.. ..+.+.. + +.++|++ |.+|
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g------~~~vP~i--fi~g 75 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANG------KRSLPQI--FIDD 75 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTT------CCCSCEE--EETT
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCC------CCCCCEE--EECC
Confidence 3445567799999999999988887652 35677888765432 2244544 6 7899988 4565
No 390
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.89 E-value=0.013 Score=49.88 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=46.9
Q ss_pred CcHHHHHHHHhhccCceEEEEEeec-----cccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 292 ASPFVRQISRNYWAYASFAFVLWRE-----EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~-----~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..|.+..++..+.+.+.|+.|...+ .....++++|+|.+.||+++|++. ..-.-+.| .+.+.|.+||++
T Consensus 49 ~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 49 AEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred hhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 3566777887776677777777531 123579999999999999999762 22111233 366788888864
No 391
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=95.88 E-value=0.0028 Score=57.09 Aligned_cols=61 Identities=16% Similarity=0.048 Sum_probs=46.4
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEE
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl 220 (540)
.+++++|.|| +.||++|..-.|.+.++.++ . .+.+..|+++........+++++ +..||.+
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~-~~~vv~is~d~~~~~~~~~~~~~------~~~~~~l 106 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK-E-EGIVLTISADLPFAQKRWCASAG------LDNVITL 106 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT-T-TSEEEEEESSCHHHHHHHHHHHT------CSSCEEE
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc-C-CCEEEEEECCCHHHHHHHHHHcC------CCceEEc
Confidence 4678899998 78999999999999988776 3 34777888886666666777777 5456644
No 392
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.87 E-value=0.0076 Score=53.00 Aligned_cols=84 Identities=13% Similarity=0.148 Sum_probs=55.7
Q ss_pred CceEEEEEe-CC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCcee--------
Q 009206 278 HKVKVIFFS-KT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPV-------- 345 (540)
Q Consensus 278 ~~~~vv~f~-~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~-------- 345 (540)
+++.+|.|. +- |....|.+..++..+.+.+.|+.|+..+ ...++++|+|.+.||+++|+++.....
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE--VPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTSSCSCSSCEEEEEETTEEEEEECC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc--CHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcc
Confidence 456666553 32 2334677777888887677777776543 356899999999999999986543322
Q ss_pred eecCCCC-hhHHHHHHHhh
Q 009206 346 VYYGSFN-NSRLSEVMEQN 363 (540)
Q Consensus 346 ~y~G~~~-~~~l~~fi~~~ 363 (540)
...|..+ .++|.++|+..
T Consensus 101 ~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 101 KINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp -CCSCCSCHHHHHHHHHHH
T ss_pred eeeeecCcHHHHHHHHHHH
Confidence 1334444 67788888763
No 393
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=95.85 E-value=0.011 Score=49.10 Aligned_cols=80 Identities=20% Similarity=0.190 Sum_probs=53.4
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChh
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~ 354 (540)
++.+|.|. +.| ....+.+..++..+. .+.|..+... ....++++|+|.+.|++++|+++. ....+.| .+.+
T Consensus 29 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~-~~~~~~g-~~~~ 103 (118)
T 2vm1_A 29 KLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVD--ELKDVAEAYNVEAMPTFLFIKDGE-KVDSVVG-GRKD 103 (118)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT--TSHHHHHHTTCCSBSEEEEEETTE-EEEEEES-CCHH
T ss_pred CEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcc--cCHHHHHHcCCCcCcEEEEEeCCe-EEEEecC-CCHH
Confidence 45566553 322 223456666777764 5666666543 236799999999999999997543 3334677 4788
Q ss_pred HHHHHHHhh
Q 009206 355 RLSEVMEQN 363 (540)
Q Consensus 355 ~l~~fi~~~ 363 (540)
.|.++|.+.
T Consensus 104 ~l~~~l~~~ 112 (118)
T 2vm1_A 104 DIHTKIVAL 112 (118)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 899998774
No 394
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=95.78 E-value=0.005 Score=51.59 Aligned_cols=68 Identities=9% Similarity=0.090 Sum_probs=44.9
Q ss_pred CCccccccCCCcEEEEEEe-----cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhh-hHHHHhCCCCccceeeee
Q 009206 144 EDFPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGL 217 (540)
Q Consensus 144 ~~F~~~v~~~~~~lV~FYa-----pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~-~~l~~~~~~~~~~~V~~~ 217 (540)
+.+++++.+++ ++.|+. +||++|++..+.+++. + +.+..+|+++++.. ..|.+..+ ..++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~-----~-i~~~~vdi~~~~~~~~~l~~~~g------~~~v 71 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST-----G-VEYETFDILEDEEVRQGLKTFSN------WPTY 71 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT-----C-SCEEEEESSSCHHHHHHHHHHHS------CCSS
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc-----C-CCeEEEECCCCHHHHHHHHHHhC------CCCC
Confidence 44556665555 445777 9999999888777554 2 36888888865432 23555556 7799
Q ss_pred eEEEEeCCCC
Q 009206 218 PSLVAFPPGC 227 (540)
Q Consensus 218 Ptl~~f~~g~ 227 (540)
|+| |.+|.
T Consensus 72 P~i--fi~g~ 79 (109)
T 1wik_A 72 PQL--YVRGD 79 (109)
T ss_dssp CEE--ECSSS
T ss_pred CEE--EECCE
Confidence 985 66663
No 395
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.75 E-value=0.0098 Score=50.53 Aligned_cols=91 Identities=20% Similarity=0.220 Sum_probs=60.0
Q ss_pred hhhhhhhc-CCCceEEEEE----eCCCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCC
Q 009206 268 GKNFLAKT-GPHKVKVIFF----SKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV 342 (540)
Q Consensus 268 ~~~fl~~~-~~~~~~vv~f----~~~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~ 342 (540)
+++.+... ..+++.+|.| +..|....+.+..++..+. .+.|..+... ....++++|+|.+.|++++|+++.
T Consensus 25 ~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g~- 100 (130)
T 1wmj_A 25 FDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVD--ELKEVAEKYNVEAMPTFLFIKDGA- 100 (130)
T ss_dssp HHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTT--TSGGGHHHHTCCSSCCCCBCTTTT-
T ss_pred HHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEecc--chHHHHHHcCCCccceEEEEeCCe-
Confidence 44444431 1234556655 2345556788888888775 4666666533 236799999999999999996543
Q ss_pred ceeeecCCCChhHHHHHHHhh
Q 009206 343 KPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 343 ~~~~y~G~~~~~~l~~fi~~~ 363 (540)
....+.| .+.+.|.++|+..
T Consensus 101 ~~~~~~g-~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 101 EADKVVG-ARKDDLQNTIVKH 120 (130)
T ss_dssp CCBCCCT-TCTTTHHHHHHHH
T ss_pred EEEEEeC-CCHHHHHHHHHHH
Confidence 3334567 5778899999874
No 396
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=94.71 E-value=0.0017 Score=55.60 Aligned_cols=85 Identities=22% Similarity=0.261 Sum_probs=54.7
Q ss_pred CceEEEEE-e---CCCCCCcHHH---HHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeC-CCCc--eeee
Q 009206 278 HKVKVIFF-S---KTGERASPFV---RQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKD-PGVK--PVVY 347 (540)
Q Consensus 278 ~~~~vv~f-~---~~~~~~~~~~---~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~-~~~~--~~~y 347 (540)
+++.+|.| . ..|....+.+ ..++..+...+.+..|.....+...++++|+|.+.|++++|.. ++.. ...+
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~ 98 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRL 98 (130)
Confidence 34555544 2 2344455655 5566666555666666553333467999999999999999942 2333 3346
Q ss_pred cCCCChhHHHHHHHh
Q 009206 348 YGSFNNSRLSEVMEQ 362 (540)
Q Consensus 348 ~G~~~~~~l~~fi~~ 362 (540)
.|..+.+.|.++|+.
T Consensus 99 ~G~~~~~~l~~~l~~ 113 (130)
T 2lst_A 99 FGSRPRAEFLKELRQ 113 (130)
Confidence 787788888888865
No 397
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=95.71 E-value=0.012 Score=49.67 Aligned_cols=84 Identities=19% Similarity=0.199 Sum_probs=54.3
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCC---CCceeeecCCC
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP---GVKPVVYYGSF 351 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~---~~~~~~y~G~~ 351 (540)
++.+|.|. +.| ....+.+..++..+ ..+.|+.+.... ...++++|+|.+.|++++|++. +.....+.|.
T Consensus 24 ~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~- 99 (118)
T 2f51_A 24 GLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK--NGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGA- 99 (118)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCC-
Confidence 45566553 322 22355666677776 567777776432 3679999999999999999862 2222235776
Q ss_pred ChhHHHHHHHhhccC
Q 009206 352 NNSRLSEVMEQNKLQ 366 (540)
Q Consensus 352 ~~~~l~~fi~~~~~~ 366 (540)
...+|.+.+.++..+
T Consensus 100 ~~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 100 DVSRIKADIEKFKHH 114 (118)
T ss_dssp CHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHhhhc
Confidence 456699999887543
No 398
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=95.54 E-value=0.026 Score=47.77 Aligned_cols=68 Identities=22% Similarity=0.339 Sum_probs=49.3
Q ss_pred cHHHHHHHHhhccCceEEEEEeec---------------------cccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCC
Q 009206 293 SPFVRQISRNYWAYASFAFVLWRE---------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF 351 (540)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~---------------------~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~ 351 (540)
.+.+..++..+. .+.+..|...+ .....+++.|+|.+.|+++++..++... .+.|..
T Consensus 44 ~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~ 121 (136)
T 1zzo_A 44 APVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRM 121 (136)
T ss_dssp HHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCC
T ss_pred HHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCC
Confidence 344555666665 56777776432 1135689999999999999997655544 688988
Q ss_pred ChhHHHHHHHh
Q 009206 352 NNSRLSEVMEQ 362 (540)
Q Consensus 352 ~~~~l~~fi~~ 362 (540)
+.+.|.++|++
T Consensus 122 ~~~~l~~~l~~ 132 (136)
T 1zzo_A 122 SQDELTRRVTA 132 (136)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999999876
No 399
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=95.50 E-value=0.018 Score=49.43 Aligned_cols=42 Identities=17% Similarity=0.279 Sum_probs=34.4
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHH
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~ 361 (540)
..+++.|+|.+.|+++++...+.....+.|..+.+.|.++|+
T Consensus 104 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 104 GELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp SHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred hhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 478999999999999999666655556789889999888863
No 400
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=95.47 E-value=0.03 Score=48.23 Aligned_cols=70 Identities=17% Similarity=0.183 Sum_probs=49.1
Q ss_pred cHHHHHHHHhhccCceEEEEEeec-------------------------cccHHHHHHcCCCCCCEEEEEeCCCCceeee
Q 009206 293 SPFVRQISRNYWAYASFAFVLWRE-------------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVY 347 (540)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~-------------------------~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y 347 (540)
.+.+..++..|.+.+.+..|.... .....+++.|+|.+.|+++++...+.....+
T Consensus 48 ~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 127 (148)
T 2b5x_A 48 MPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQ 127 (148)
T ss_dssp HHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEE
T ss_pred hHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEe
Confidence 344555666666556677666421 1235799999999999999996555544456
Q ss_pred cCCCChhHHHHHHHh
Q 009206 348 YGSFNNSRLSEVMEQ 362 (540)
Q Consensus 348 ~G~~~~~~l~~fi~~ 362 (540)
.|..+.+.|.++|+.
T Consensus 128 ~g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 128 AGGSGMKMLEKRVNR 142 (148)
T ss_dssp ESCSTTHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH
Confidence 788888889888876
No 401
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=95.44 E-value=0.03 Score=47.51 Aligned_cols=68 Identities=19% Similarity=0.362 Sum_probs=48.9
Q ss_pred cHHHHHHHHhhccCceEEEEEeecc--------------------ccHHHHHHcCCCCCCEEEEEeCCCCceeeec---C
Q 009206 293 SPFVRQISRNYWAYASFAFVLWREE--------------------ESSIWWNTFEVESAPAIVFLKDPGVKPVVYY---G 349 (540)
Q Consensus 293 ~~~~~~~A~~~~~~~~f~~v~~~~~--------------------~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~---G 349 (540)
.+.+..++..+. .+.+..|...+. ....+++.|++.+.|+++++...+... .+. |
T Consensus 43 ~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g 120 (136)
T 1lu4_A 43 APSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTA 120 (136)
T ss_dssp HHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSS
T ss_pred HHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCC
Confidence 344555666665 566777664331 135689999999999999996555544 677 8
Q ss_pred CCChhHHHHHHHh
Q 009206 350 SFNNSRLSEVMEQ 362 (540)
Q Consensus 350 ~~~~~~l~~fi~~ 362 (540)
..+.+.|.++|++
T Consensus 121 ~~~~~~l~~~l~~ 133 (136)
T 1lu4_A 121 AMSQDELSGRVAA 133 (136)
T ss_dssp CCCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH
Confidence 8899999999876
No 402
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=95.33 E-value=0.025 Score=54.27 Aligned_cols=96 Identities=5% Similarity=-0.106 Sum_probs=61.5
Q ss_pred CcEEEEEE-ecCCCCccCChHHHHHHHHHHhcc-cceeeeeccchhhhhHHHH------hC--CC------------Ccc
Q 009206 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE------RK--PI------------GQI 211 (540)
Q Consensus 154 ~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~~l~~------~~--~~------------~~~ 211 (540)
+.+++.|| +.||+.|..-.|.+.++..+++.. +.|..|.++........++ +. ++ .+.
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~~ 109 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAVK 109 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHHH
Confidence 47778888 999999999999999999998764 3777777774332222333 22 11 113
Q ss_pred ceee------------eeeEEEEeCCCCCCCCCccccc----CCCCHHHHHHHHHHh
Q 009206 212 FFRR------------GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATA 252 (540)
Q Consensus 212 ~~V~------------~~Ptl~~f~~g~~~~~~~~~y~----G~~~~~~i~~fi~~~ 252 (540)
|.+. .+|++.++-+..+ ....+. ..++.+.|+..+...
T Consensus 110 ygv~~~~~~~~~g~~~~~p~~fiID~~G~---I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 110 LGMVDPDERTSTGMPLTCRAVFIIGPDKK---LKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp TTCEEEEEECTTCCEEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCcCcccccCCCcccccceEEEECCCCE---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3353 5799888854332 112222 246889998888764
No 403
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.29 E-value=0.02 Score=55.38 Aligned_cols=92 Identities=9% Similarity=0.089 Sum_probs=58.9
Q ss_pred hhhhhhhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 268 GKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 268 ~~~fl~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
+...+.....++++||.| .+ .|....|.+..+|..|. .+.|+.|.... ..++.+|+|.+.||+++|+++..
T Consensus 123 f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-~v~f~kVd~d~---~~l~~~~~I~~~PTll~~~~G~~- 197 (245)
T 1a0r_P 123 FLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-MVKFCKIKASN---TGAGDRFSSDVLPTLLVYKGGEL- 197 (245)
T ss_dssp HHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT-TSEEEEEEHHH---HCCTTSSCTTTCSEEEEEETTEE-
T ss_pred HHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CCEEEEEeCCc---HHHHHHCCCCCCCEEEEEECCEE-
Confidence 444443322345666655 33 23345677888888885 47787776433 45788999999999999986432
Q ss_pred eeeecCC-------CChhHHHHHHHhhc
Q 009206 344 PVVYYGS-------FNNSRLSEVMEQNK 364 (540)
Q Consensus 344 ~~~y~G~-------~~~~~l~~fi~~~~ 364 (540)
...+.|. ++.+.|..||..+.
T Consensus 198 v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 198 LSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEeCCcccccccccHHHHHHHHHHcC
Confidence 2223332 46678999998864
No 404
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.14 E-value=0.0085 Score=47.45 Aligned_cols=80 Identities=9% Similarity=-0.036 Sum_probs=45.7
Q ss_pred EEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchh-hhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCCcc
Q 009206 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (540)
Q Consensus 156 ~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~-~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~ 234 (540)
-++.|+++||++|++....+++.. -...+..||..++. ....+.+..|.. .|.+.++|+|.+ +|..
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~-~~~~~~vP~i~i--~g~~------ 71 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKV-IFPISTVPQIFI--DDEH------ 71 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCC-SSCCCSSCEEEE--TTEE------
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCC-CCCCCccCEEEE--CCEE------
Confidence 467788899999998877665432 11244445544331 123467777620 011389999954 5521
Q ss_pred cccCCCCHHHHHHHHHHh
Q 009206 235 RFEGELSVDAVTDWFATA 252 (540)
Q Consensus 235 ~y~G~~~~~~i~~fi~~~ 252 (540)
-| ..++|..++.+.
T Consensus 72 --i~--g~~~i~~~~~~~ 85 (89)
T 3msz_A 72 --IG--GFTELKANADKI 85 (89)
T ss_dssp --EE--SHHHHHHTHHHH
T ss_pred --Ee--ChHHHHHHHHHH
Confidence 22 356677666554
No 405
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=95.05 E-value=0.047 Score=41.58 Aligned_cols=70 Identities=11% Similarity=0.167 Sum_probs=46.4
Q ss_pred EEEEEeCC---CCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCC-ChhHH
Q 009206 281 KVIFFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRL 356 (540)
Q Consensus 281 ~vv~f~~~---~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~-~~~~l 356 (540)
.|.|+.+. +....+.+..++..+...+.+..+. ...++++|+|.+.||+++ + + +. .+.|.. +.+.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~-G-~~-~~~G~~~~~~~l 72 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV--D-G-EL-KIMGRVASKEEI 72 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE--T-T-EE-EECSSCCCHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE--C-C-EE-EEcCCCCCHHHH
Confidence 34556432 3334566777787776555555554 457899999999999988 3 2 22 234876 78888
Q ss_pred HHHH
Q 009206 357 SEVM 360 (540)
Q Consensus 357 ~~fi 360 (540)
.+++
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8775
No 406
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.89 E-value=0.19 Score=53.78 Aligned_cols=175 Identities=14% Similarity=0.061 Sum_probs=100.9
Q ss_pred CCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEEeCCCCCCCCC
Q 009206 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~ 232 (540)
..++-+.++.+.|..|..+....++++. |.+.+.+-..+ + . -...|++.+.++|.. .
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~-~s~~i~~~~~~-~---~---------------~~~~p~~~~~~~~~~---~ 74 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAE-LSDKVTFKEDN-T---L---------------PVRKPSFLITNPGSQ---Q 74 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHT-TCTTEEEEECT-T---S---------------SSCSSEEEEECTTCC---C
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHH-hCCceEEEEcC-C---c---------------ccCCCEEEEecCCCc---c
Confidence 4566667777778888777776666654 23333331111 0 0 025699999987743 2
Q ss_pred cccccCCCCHHHHHHHHHHhh--hcCCcccccccchhhhhhhhhcCCCceEEEEE-eCCC---CCCcHHHHHHHHhhccC
Q 009206 233 MTRFEGELSVDAVTDWFATAI--LKLPRIFYYTKESMGKNFLAKTGPHKVKVIFF-SKTG---ERASPFVRQISRNYWAY 306 (540)
Q Consensus 233 ~~~y~G~~~~~~i~~fi~~~v--~~lp~~~~i~~~~~~~~fl~~~~~~~~~vv~f-~~~~---~~~~~~~~~~A~~~~~~ 306 (540)
...|.|-..=..+..|+...+ .+.|.. ++ ++..+.. .... ..+.|+.| ...| ....|.+..++..+. .
T Consensus 75 ~i~f~g~p~g~e~~s~~~~l~~~~~~~~~--~~-~~~~~~i-~~~~-~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~ 148 (521)
T 1hyu_A 75 GPRFAGSPLGHEFTSLVLALLWTGGHPSK--EA-QSLLEQI-RDID-GDFEFETYYSLSCHNCPDVVQALNLMAVLNP-R 148 (521)
T ss_dssp SCEEESCCCGGGHHHHHHHHHHHTTCCCC--SC-HHHHHHH-HHCC-SCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-T
T ss_pred eEEEeccCcchhHHHHHHHHHhhcCCCCC--CC-HHHHHHH-HhcC-CCcceEEEECCCCcCcHHHHHHHHHHHhHcC-c
Confidence 578877555555555554432 222221 22 2223333 2221 23445555 4332 223466666777663 5
Q ss_pred ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 307 ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 307 ~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+.+..++.. ..++++++|+|.+.|++++ +++ . +..|..+.+.|.+|+...
T Consensus 149 v~~~~vd~~--~~~~~~~~~~i~svPt~~i---~g~-~-~~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 149 IKHTAIDGG--TFQNEITERNVMGVPAVFV---NGK-E-FGQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEEEETT--TCHHHHHHTTCCSSSEEEE---TTE-E-EEESCCCHHHHHHHHCCS
T ss_pred eEEEEEech--hhHHHHHHhCCCccCEEEE---CCE-E-EecCCCCHHHHHHHHhhc
Confidence 666666532 3478999999999999977 332 2 345888899999998653
No 407
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=94.81 E-value=0.098 Score=45.35 Aligned_cols=86 Identities=10% Similarity=0.162 Sum_probs=54.6
Q ss_pred CceEEEEEe-C---CCCCCcHHHHHHHHhhcc-CceEEEEEeeccc---------------------cHHHHHHcCCCCC
Q 009206 278 HKVKVIFFS-K---TGERASPFVRQISRNYWA-YASFAFVLWREEE---------------------SSIWWNTFEVESA 331 (540)
Q Consensus 278 ~~~~vv~f~-~---~~~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~---------------------~~~l~~~f~V~~~ 331 (540)
.++.+|.|. . .|....+.+..+...+.+ .+.+..|...... ...+++.|+|.+.
T Consensus 30 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 109 (152)
T 2lja_A 30 GKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGI 109 (152)
T ss_dssp TSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSS
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCC
Confidence 346566552 2 233345566666666654 2555555433221 1268899999999
Q ss_pred CEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 332 Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
|+++++...+.....+.|..+.+.|.++|+..
T Consensus 110 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 110 PRFILLDRDGKIISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp CCEEEECTTSCEEESSCCCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCeEEEccCCCCCHHHHHHHHHHH
Confidence 99999976555444456777888899998763
No 408
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=94.69 E-value=0.059 Score=46.89 Aligned_cols=85 Identities=14% Similarity=0.193 Sum_probs=54.5
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhcc-CceEEEEEeeccc--------------------cHHHHHHcCCCCCCE
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYWA-YASFAFVLWREEE--------------------SSIWWNTFEVESAPA 333 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~~-~~~f~~v~~~~~~--------------------~~~l~~~f~V~~~Pt 333 (540)
++.+|.|. ..| ....+.+..++..|.+ .+.+..|...+.. ...+++.|+|.+.|+
T Consensus 27 k~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 106 (151)
T 2f9s_A 27 KGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPT 106 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCE
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCe
Confidence 46566553 222 1123445556666654 3666666543211 236899999999999
Q ss_pred EEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 334 IVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 334 lv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
++++...+.....+.|..+.+.|.++|+..
T Consensus 107 ~~lid~~G~i~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 107 TFLINPEGKVVKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp EEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred EEEECCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 999965555444567888899999998863
No 409
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=94.66 E-value=0.0095 Score=63.03 Aligned_cols=89 Identities=10% Similarity=0.105 Sum_probs=55.0
Q ss_pred cccchhhhhhhhhcCCCceEEEEE-eC---CCCCCcHHHHHHHHhhcc--------CceEEEEEeeccccHHHHHHcCCC
Q 009206 262 YTKESMGKNFLAKTGPHKVKVIFF-SK---TGERASPFVRQISRNYWA--------YASFAFVLWREEESSIWWNTFEVE 329 (540)
Q Consensus 262 i~~~~~~~~fl~~~~~~~~~vv~f-~~---~~~~~~~~~~~~A~~~~~--------~~~f~~v~~~~~~~~~l~~~f~V~ 329 (540)
++..+ +++.+... ..++.+|.| .+ .|....|.+..++..|.. .+.|+.|+.. ....++++|+|.
T Consensus 28 Lt~~~-F~~~l~~~-~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d--~~~~la~~y~V~ 103 (470)
T 3qcp_A 28 LSGDD-FSRVHRVA-PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA--SEVDLCRKYDIN 103 (470)
T ss_dssp CSCSC-GGGTCTTG-GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT--TCHHHHHHTTCC
T ss_pred CCHHH-HHHHHHhC-CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC--CCHHHHHHcCCC
Confidence 44444 45555432 123555544 33 233456778888888762 3566666533 237899999999
Q ss_pred CCCEEEEEeCCC-CceeeecCCCChh
Q 009206 330 SAPAIVFLKDPG-VKPVVYYGSFNNS 354 (540)
Q Consensus 330 ~~Ptlv~fk~~~-~~~~~y~G~~~~~ 354 (540)
++||+++|++++ ..+..|.|..+.+
T Consensus 104 ~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 104 FVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp SSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred ccCeEEEEECCCceEEEEeeCCCCHH
Confidence 999999997654 3444577764443
No 410
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=94.63 E-value=0.033 Score=53.01 Aligned_cols=42 Identities=12% Similarity=0.053 Sum_probs=33.8
Q ss_pred cEEEEEEecCCCCccCChHHHHHHHHHHhccc-ceeeeeccch
Q 009206 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDI 196 (540)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~ 196 (540)
++|+.|.+.||+.|..-.|.+.++..+++... .|..|.++..
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~ 76 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSV 76 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 55666679999999999999999999997653 7777777743
No 411
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=94.60 E-value=0.12 Score=44.95 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=35.8
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|+..
T Consensus 96 ~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 96 KAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp CHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56899999999999999965555555678888888999988763
No 412
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=94.39 E-value=0.039 Score=46.94 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=42.9
Q ss_pred ceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 307 ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 307 ~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..+..|.+.....+.++.+++|.+.||+++|+++ +.-.-..|.+..+.+..|++..
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G-~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD-VESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT-EEEEEEECCCCHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC-EEEeeecCCCCHHHHHHHHHHH
Confidence 5677777655434578899999999999999954 3333468999999999998763
No 413
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=94.21 E-value=0.0076 Score=52.32 Aligned_cols=70 Identities=11% Similarity=0.250 Sum_probs=44.3
Q ss_pred CCccccccCCCcEEEEEEecCCCCccCC-hHHHHHHHHHHhcccceeeeeccchh----hhhHHHHhCCCCccceeeeee
Q 009206 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLP 218 (540)
Q Consensus 144 ~~F~~~v~~~~~~lV~FYapwC~~C~~l-~p~~~~~A~~l~~~~~v~~Vdc~~~~----~~~~l~~~~~~~~~~~V~~~P 218 (540)
+.+++.+...+ ++.|+++||++|++. .+.+++... ....+..+|++.++ ....|.+.+| +.++|
T Consensus 28 ~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~---~~i~~~~vdvd~~~~~~~~~~~L~~~~g------~~tVP 96 (129)
T 3ctg_A 28 AHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV---PKSKALVLELDEMSNGSEIQDALEEISG------QKTVP 96 (129)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSC
T ss_pred HHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc---cCCCcEEEEccccCCHHHHHHHHHHHhC------CCCCC
Confidence 34555554444 678999999999987 666654431 01356666666432 1234777777 88999
Q ss_pred EEEEeCCC
Q 009206 219 SLVAFPPG 226 (540)
Q Consensus 219 tl~~f~~g 226 (540)
+| |.+|
T Consensus 97 ~v--fi~g 102 (129)
T 3ctg_A 97 NV--YING 102 (129)
T ss_dssp EE--EETT
T ss_pred EE--EECC
Confidence 96 5565
No 414
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=94.07 E-value=0.12 Score=43.47 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=35.4
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+++.|++.+.|+++++...+.....+.|..+.+.|.++|++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 4689999999999999996556555567898898999998875
No 415
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=93.94 E-value=0.12 Score=44.89 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=36.0
Q ss_pred HHHHHHcC--CCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFE--VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~--V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+++.|+ +.+.|+++++...+.....+.|..+.+.|.++|+.
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 56888999 88999999997666666667899999999999876
No 416
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=93.63 E-value=0.018 Score=53.35 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=33.4
Q ss_pred CCcEEEEEEecCCCCccCChHHH---HHHHHHHhcccceeeeecc
Q 009206 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~l~p~~---~~~A~~l~~~~~v~~Vdc~ 194 (540)
.++.+|+|++.||+||+++.|.+ .++.+.+.+.+++..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 47899999999999999999986 6888887655555555543
No 417
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=93.51 E-value=0.16 Score=44.71 Aligned_cols=43 Identities=14% Similarity=0.214 Sum_probs=33.6
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHhh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~--~~~~l~~fi~~~ 363 (540)
..++++|+|.+.|+++++...+.....+ |.. +.+.+.++|+..
T Consensus 106 ~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 106 QELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHH
Confidence 4799999999999999995555444446 877 788888888763
No 418
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=93.51 E-value=0.24 Score=42.32 Aligned_cols=81 Identities=11% Similarity=0.172 Sum_probs=49.8
Q ss_pred ceEEEEE-e---CCCCCCcHHHHHHHHhh-ccC-ceEEEEEeeccc-----------------------cHHHHHHcCCC
Q 009206 279 KVKVIFF-S---KTGERASPFVRQISRNY-WAY-ASFAFVLWREEE-----------------------SSIWWNTFEVE 329 (540)
Q Consensus 279 ~~~vv~f-~---~~~~~~~~~~~~~A~~~-~~~-~~f~~v~~~~~~-----------------------~~~l~~~f~V~ 329 (540)
++.+|.| . ..|....+.+..++..| .+. +.+..|...... ...+++.|+|.
T Consensus 34 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 113 (148)
T 3fkf_A 34 RYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAIL 113 (148)
T ss_dssp SEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC
T ss_pred cEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCC
Confidence 4656655 2 23333455666677777 443 556666543322 34789999999
Q ss_pred CCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 330 SAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 330 ~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
+.|+++++...+.. .+... +.+.|.++|++
T Consensus 114 ~~P~~~lid~~G~i--~~~~~-~~~~l~~~l~~ 143 (148)
T 3fkf_A 114 TLPTNILLSPTGKI--LARDI-QGEALTGKLKE 143 (148)
T ss_dssp SSSEEEEECTTSBE--EEESC-CHHHHHHHHHH
T ss_pred CcCEEEEECCCCeE--EEecC-CHHHHHHHHHH
Confidence 99999999544432 23222 67778888765
No 419
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=93.31 E-value=0.39 Score=43.07 Aligned_cols=43 Identities=7% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCCcEEEEEEecCCC-CccCChHHHHHHHHHHhcc---cceeeeecc
Q 009206 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELG 194 (540)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~l~p~~~~~A~~l~~~---~~v~~Vdc~ 194 (540)
.+++++|.|+..||+ .|....+.+.++.+.++.. +.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 578999999999996 6999999999988887543 355555554
No 420
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=93.11 E-value=0.38 Score=41.09 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=48.2
Q ss_pred CceEEEEE----eCCCCCCcHHHHHHHHhhccC-ceEEEEEeeccccHH-------------------------HHHHcC
Q 009206 278 HKVKVIFF----SKTGERASPFVRQISRNYWAY-ASFAFVLWREEESSI-------------------------WWNTFE 327 (540)
Q Consensus 278 ~~~~vv~f----~~~~~~~~~~~~~~A~~~~~~-~~f~~v~~~~~~~~~-------------------------l~~~f~ 327 (540)
+++.+|.| |..|....+.+..+...|.+. +.+..|...+ ... +++.|+
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIER--KDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCS--SSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecC--CHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 35666655 234444566777777777654 5666665432 223 899999
Q ss_pred CCCCCEEEEEeCCCCceeeecCCCChhHHHH
Q 009206 328 VESAPAIVFLKDPGVKPVVYYGSFNNSRLSE 358 (540)
Q Consensus 328 V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~ 358 (540)
|.+.|+++++...+.....+.|..+.+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~ 139 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGYENLDDFLV 139 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCGGGHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCCHHHHHHHHH
Confidence 9999999999655544434455433333333
No 421
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=93.08 E-value=0.11 Score=45.19 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=37.2
Q ss_pred cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 319 ~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
...+++.|+|.+.|+++++...+.....+.|..+.+.|.++|++.
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLA 142 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHT
T ss_pred hHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhc
Confidence 467899999999999999866565555678888999999999875
No 422
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=93.06 E-value=0.1 Score=49.31 Aligned_cols=95 Identities=7% Similarity=-0.057 Sum_probs=58.6
Q ss_pred cEEEEEEecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHH-------hCCC------------Ccccee
Q 009206 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAE-------RKPI------------GQIFFR 214 (540)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~-------~~~~------------~~~~~V 214 (540)
++|+.|.+.||+.|..-.|.+.++..+++... .+..|.++.........+ +.++ .+.|.+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 44555579999999999999999999997643 777777774322211222 1221 112335
Q ss_pred e------------eeeEEEEeCCCCCCCCCcccc----cCCCCHHHHHHHHHHh
Q 009206 215 R------------GLPSLVAFPPGCKSSDCMTRF----EGELSVDAVTDWFATA 252 (540)
Q Consensus 215 ~------------~~Ptl~~f~~g~~~~~~~~~y----~G~~~~~~i~~fi~~~ 252 (540)
. ..|++.++-+..+ ....+ ...++.+.|...+...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~---I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKK---IKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSB---EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCE---EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 2 4789888854332 11122 2357899998888664
No 423
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=93.03 E-value=0.042 Score=46.26 Aligned_cols=65 Identities=9% Similarity=0.175 Sum_probs=40.2
Q ss_pred ccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccc--h-hhh-hHHHHhCCCCccceeeeeeEEE
Q 009206 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--I-RLA-THLAERKPIGQIFFRRGLPSLV 221 (540)
Q Consensus 146 F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~--~-~~~-~~l~~~~~~~~~~~V~~~Ptl~ 221 (540)
+++.+++++ ++.|.+|||++|++..+.+++.. ..+..+|.+. + ... ..|.+..| ..++|++.
T Consensus 10 ~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~------i~~~~~dvd~~~~~~~~~~~l~~~~g------~~tvP~vf 75 (114)
T 3h8q_A 10 LVGLIERSR--VVIFSKSYCPHSTRVKELFSSLG------VECNVLELDQVDDGARVQEVLSEITN------QKTVPNIF 75 (114)
T ss_dssp HHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEETTTSTTHHHHHHHHHHHHS------CCSSCEEE
T ss_pred HHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcC------CCcEEEEecCCCChHHHHHHHHHHhC------CCccCEEE
Confidence 444554444 34499999999998887776541 2456666663 2 111 23555556 77999985
Q ss_pred EeCCC
Q 009206 222 AFPPG 226 (540)
Q Consensus 222 ~f~~g 226 (540)
+ +|
T Consensus 76 i--~g 78 (114)
T 3h8q_A 76 V--NK 78 (114)
T ss_dssp E--TT
T ss_pred E--CC
Confidence 4 55
No 424
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=92.71 E-value=0.3 Score=42.14 Aligned_cols=44 Identities=11% Similarity=0.081 Sum_probs=32.7
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHhhc
Q 009206 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQNK 364 (540)
Q Consensus 321 ~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~--~~~~l~~fi~~~~ 364 (540)
.+++.|+|.+.|+++++...+.....+.|.. +.+.|.++|++..
T Consensus 96 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 96 QTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred hhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 5788899999999999965555444466653 4478999998753
No 425
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=92.61 E-value=0.33 Score=42.32 Aligned_cols=41 Identities=17% Similarity=0.355 Sum_probs=34.6
Q ss_pred HHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 322 l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
+++.|+|.+.|+++++...+.....+.|..+.+.|.++|+.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 89999999999999997666655567898888889988876
No 426
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=92.59 E-value=0.25 Score=43.30 Aligned_cols=37 Identities=11% Similarity=0.245 Sum_probs=29.9
Q ss_pred CCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 327 ~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
++.+.|+++++...+.....+.|..+.+.|.++|+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 8999999999966665555678888899999998763
No 427
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=92.25 E-value=0.33 Score=42.23 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=34.9
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 321 ~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
.+++.|+|.+.|+++++...+.....+.|..+.+.|.++|+..
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATL 150 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 5899999999999999966665555578888888898888763
No 428
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=92.03 E-value=0.3 Score=42.72 Aligned_cols=44 Identities=11% Similarity=0.207 Sum_probs=36.1
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|++.
T Consensus 111 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 111 GTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred hHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 57999999999999999965555545578988999999999874
No 429
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=91.40 E-value=0.069 Score=48.16 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=30.7
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHHHHHhccccee
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTG 189 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~ 189 (540)
+..+.+|+|+.-.|+||+++.|.+.++.+.+...+++.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~ 57 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQ 57 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEE
Confidence 46789999999999999999999988887765444333
No 430
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=91.22 E-value=0.12 Score=49.10 Aligned_cols=52 Identities=6% Similarity=-0.071 Sum_probs=37.7
Q ss_pred CCCcEEEEEEecC-CCCcc-----CChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVYSDG-SYLCG-----QFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~-----~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.+++++|.||..| |+.|. .-.|.+.+. +.+ +.|..|+++........+++++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~g-v~VvgIS~Ds~~~~~~f~~~~g 104 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPH-LKLIVITVDSPSSLARARHEHG 104 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTT-SEEEEEESSCHHHHHHHHHHHC
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCC-CEEEEEECCCHHHHHHHHHHcC
Confidence 4678999999888 99999 666666665 433 3677788876555555777766
No 431
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=91.18 E-value=0.082 Score=43.85 Aligned_cols=38 Identities=16% Similarity=0.150 Sum_probs=31.1
Q ss_pred cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 319 ~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
...++++|+|.+.||+++ + +. .|.|..+.+.|.+|+.-
T Consensus 55 ~~~l~~~~~V~~~PT~~i--~-G~---~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII--N-GR---TYTGVRSLEALAVASGY 92 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE--T-TE---EEESCCCHHHHHHHHTC
T ss_pred hHHHHHHcCCeEeCEEEE--C-CE---EecCCCCHHHHHHHhCC
Confidence 467999999999999777 3 32 38999999999999854
No 432
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=91.08 E-value=0.29 Score=42.36 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=33.2
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+++.|+|.+.|+++++...+.....+.|..+.+.|.++|+.
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~ 149 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLP 149 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHH
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHH
Confidence 4688999999999877775555544457888888888888765
No 433
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=90.85 E-value=0.52 Score=41.17 Aligned_cols=87 Identities=8% Similarity=0.118 Sum_probs=51.8
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhc-cCceEEEEEeec-----------------cccHHHHHHcCCCCCCEEEE
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYW-AYASFAFVLWRE-----------------EESSIWWNTFEVESAPAIVF 336 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~-~~~~f~~v~~~~-----------------~~~~~l~~~f~V~~~Ptlv~ 336 (540)
++.+|.|. ..| ....+.+..++..|. ..+.+..|.... .....+++.|+|.+.|++++
T Consensus 42 k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~l 121 (158)
T 3hdc_A 42 KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFI 121 (158)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEE
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEE
Confidence 46566553 322 122344555666665 344555554332 01357999999999999988
Q ss_pred EeCCCCceeeecCCC--ChhHHHHHHHhhcc
Q 009206 337 LKDPGVKPVVYYGSF--NNSRLSEVMEQNKL 365 (540)
Q Consensus 337 fk~~~~~~~~y~G~~--~~~~l~~fi~~~~~ 365 (540)
+...+.....+.|.. +..++.+.+..+..
T Consensus 122 id~~G~i~~~~~G~~~~~~~~~~~~~~~~~~ 152 (158)
T 3hdc_A 122 VDRKGIIRQRVTGGIEWDAPKVVSYLKSLEG 152 (158)
T ss_dssp ECTTSBEEEEEESCCCTTSHHHHHHHHTTC-
T ss_pred EcCCCCEEEEEeCCCccchHHHHHHHHhhcc
Confidence 866665555567764 45667777766543
No 434
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=90.51 E-value=1.6 Score=38.60 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=38.0
Q ss_pred cCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCC-CCceeeecCCCChhHHHHHHHh
Q 009206 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 305 ~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~-~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
+.+.+..+...+.+...+.++|++.++|+++++... +..-....| ++.+++.+++..
T Consensus 76 ~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 76 EHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp HTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred cCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 344555555533334678999999999999999764 433333555 788777776654
No 435
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=90.50 E-value=0.079 Score=45.71 Aligned_cols=68 Identities=15% Similarity=0.134 Sum_probs=40.6
Q ss_pred CccccccCCCcEEEEEEecCCCCccCChHHHHHHHHHHhcc-cceeeeeccch---hhh-hHHHHhCCCCccceeeeeeE
Q 009206 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI---RLA-THLAERKPIGQIFFRRGLPS 219 (540)
Q Consensus 145 ~F~~~v~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~---~~~-~~l~~~~~~~~~~~V~~~Pt 219 (540)
+|+++++.+. ++.|..+||++|++....+.+. ... ..+..+|.+.. ... ..|.+..| ...+|+
T Consensus 6 ~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~----~~~~v~~~~idid~~~d~~~~~~~l~~~~G------~~tVP~ 73 (127)
T 3l4n_A 6 EYSLILDLSP--IIIFSKSTCSYSKGMKELLENE----YQFIPNYYIIELDKHGHGEELQEYIKLVTG------RGTVPN 73 (127)
T ss_dssp HHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH----EEEESCCEEEEGGGSTTHHHHHHHHHHHHS------CCSSCE
T ss_pred HHHHHHccCC--EEEEEcCCCccHHHHHHHHHHh----cccCCCcEEEEecCCCCHHHHHHHHHHHcC------CCCcce
Confidence 3555565554 7888999999998877666552 111 24555665532 122 22334445 679999
Q ss_pred EEEeCCC
Q 009206 220 LVAFPPG 226 (540)
Q Consensus 220 l~~f~~g 226 (540)
| |.+|
T Consensus 74 I--fI~G 78 (127)
T 3l4n_A 74 L--LVNG 78 (127)
T ss_dssp E--EETT
T ss_pred E--EECC
Confidence 8 4455
No 436
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=90.49 E-value=0.67 Score=40.09 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=28.1
Q ss_pred cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 319 ~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
...+++.|+|.+.|+++++...+.....+ .+.+.|.++|+.
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 138 (152)
T 2lrn_A 98 VKDVLESYCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEK 138 (152)
T ss_dssp HHHHHHHTTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHH
T ss_pred hHHHHHHhCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHH
Confidence 35789999999999999995444322222 345677777765
No 437
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=90.12 E-value=0.56 Score=40.48 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=31.3
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHh
Q 009206 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (540)
Q Consensus 321 ~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~--~~~~l~~fi~~ 362 (540)
.+++.|+|.+.|+++++...+.....+.|.. +...+.++|++
T Consensus 97 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 97 RVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp HHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred HHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHH
Confidence 3889999999998888865555444566764 56688888876
No 438
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=90.04 E-value=0.14 Score=46.85 Aligned_cols=55 Identities=9% Similarity=0.023 Sum_probs=43.1
Q ss_pred CCcEEEEEEecCCCCccC-ChHHHHHHHHHHhcc-c-ceeeeeccchhhhhHHHHhCC
Q 009206 153 SKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 153 ~~~~lV~FYapwC~~C~~-l~p~~~~~A~~l~~~-~-~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
..++|+.|.+.||+.|.. -.|.+.+.+.+++.. + .|..|.++........+++.+
T Consensus 48 k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~ 105 (176)
T 4f82_A 48 KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLH 105 (176)
T ss_dssp CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 334555666999999998 899999999999765 3 688888886666666788877
No 439
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=89.75 E-value=0.73 Score=41.30 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=50.9
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhccC-c------eEEEEEeeccccHHHHHHc--------------------
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWAY-A------SFAFVLWREEESSIWWNTF-------------------- 326 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~-~------~f~~v~~~~~~~~~l~~~f-------------------- 326 (540)
.++.+|.|. ..| ....+.+..+...|.+. + .|..|...+. ..+.+++|
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDY-SRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCC-CHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCC-CHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 356666553 222 22345556667677554 5 6666654331 23344444
Q ss_pred -----CCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 327 -----EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 327 -----~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
++...|+++++...+.....+.|..+.+.|.++|+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 677899888886656555567888888999988876
No 440
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=89.52 E-value=0.81 Score=40.11 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=31.6
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCC-ChhHHHHHHHh
Q 009206 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVMEQ 362 (540)
Q Consensus 321 ~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~-~~~~l~~fi~~ 362 (540)
.+++.|+|...|+++++...+... +.|.. +.+.|.++|++
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i~--~~g~~~~~~~l~~~l~~ 161 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNVL--YAGTTPSLGELESVIKS 161 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCEE--EEEESCCHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEEcCCCcEE--EeCCCCCHHHHHHHHHH
Confidence 688999999999999996555432 37777 88889988876
No 441
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=88.99 E-value=0.23 Score=44.29 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=31.4
Q ss_pred HHHcCCCCCCEEEEEeCCCCceeeecCCCC-hhHHHHHHHh
Q 009206 323 WNTFEVESAPAIVFLKDPGVKPVVYYGSFN-NSRLSEVMEQ 362 (540)
Q Consensus 323 ~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~-~~~l~~fi~~ 362 (540)
.++|+|.+.|+++++...+.....+.|..+ .+.+.++|++
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 789999999999999555544444578887 8888888876
No 442
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=88.91 E-value=0.19 Score=45.78 Aligned_cols=41 Identities=17% Similarity=0.267 Sum_probs=31.5
Q ss_pred CCCcEEEEEEecCCCCccCChHHH-HHHHHHHhcccceeeee
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLEGIANTGMVE 192 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~-~~~A~~l~~~~~v~~Vd 192 (540)
+.++.+|+||+++|++|..+.+.. .++.+.+.+.+++--+.
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~ 57 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFH 57 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEE
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEe
Confidence 456789999999999999999988 88887765544444333
No 443
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=88.32 E-value=0.58 Score=41.19 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=32.2
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+++.|+|...|+.+++...+.....+.|..+.+.|.++|+.
T Consensus 115 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 115 GMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp CHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred hHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 4689999999999777775555544456788888888877765
No 444
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=87.88 E-value=1.4 Score=37.86 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=27.4
Q ss_pred HHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 321 ~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
.+.+.|+|...|+++++...+... +.. .+.+.|.+.|++
T Consensus 107 ~~~~~~~v~~~P~~~lid~~G~i~--~~~-~~~~~l~~~l~~ 145 (150)
T 3fw2_A 107 EVAKQYSIYKIPANILLSSDGKIL--AKN-LRGEELKKKIEN 145 (150)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEE--EES-CCHHHHHHHHHH
T ss_pred HHHHHcCCCccCeEEEECCCCEEE--Ecc-CCHHHHHHHHHH
Confidence 789999999999999995544332 222 266677777654
No 445
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=87.85 E-value=0.27 Score=41.01 Aligned_cols=61 Identities=3% Similarity=0.086 Sum_probs=42.9
Q ss_pred CcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHH
Q 009206 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (540)
Q Consensus 292 ~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi 360 (540)
..+.+..++.++ .+.|..+++.+ .++++.+|++. .|+|++|.++. . +..|.++.+.|.+||
T Consensus 46 a~~~L~~l~~e~--~i~~~~vDId~--d~~l~~~ygv~-VP~l~~~~dG~--~-v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 46 MIASLRVLQKKS--WFELEVINIDG--NEHLTRLYNDR-VPVLFAVNEDK--E-LCHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHHS--CCCCEEEETTT--CHHHHHHSTTS-CSEEEETTTTE--E-EECSSCCCHHHHHHH
T ss_pred HHHHHHHHHHhc--CCeEEEEECCC--CHHHHHHhCCC-CceEEEEECCE--E-EEecCCCHHHHHHHh
Confidence 345556566554 36677776542 46799999996 99999987643 2 356888999999887
No 446
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=87.76 E-value=0.79 Score=44.64 Aligned_cols=83 Identities=12% Similarity=0.056 Sum_probs=49.3
Q ss_pred cEEEEEEecCCCCccCChHHHHHHHHHHhccc-cee--eee--ccc--------hhhhhHHHHhCCCCccceeeee--eE
Q 009206 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIA-NTG--MVE--LGD--------IRLATHLAERKPIGQIFFRRGL--PS 219 (540)
Q Consensus 155 ~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~-~v~--~Vd--c~~--------~~~~~~l~~~~~~~~~~~V~~~--Pt 219 (540)
..+..|.+++|++|.+....+++.+....-.. .+- .+| ... ......+.+++| ++++ |+
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~vi~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G------~~tVyTPq 117 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGDVVGLSYHVDYWNYLGWTDSLASKENTERQYGYMRALG------RNGVYTPQ 117 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTSSEEEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTT------CSCCCSSE
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCCeeeEEEEEEEecccccccchhhhhhhHHHHHHHHHhC------CCcccCCE
Confidence 56667889999999998888888876532100 111 222 000 011223677777 8888 98
Q ss_pred EEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 009206 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (540)
Q Consensus 220 l~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~ 252 (540)
+++ +|.. . -|..+.+.|.+.+.+.
T Consensus 118 I~I--ng~~------~-v~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 118 AIL--NGRD------H-VKGADVRGIYDRLDAF 141 (270)
T ss_dssp EEE--TTTE------E-EETTCHHHHHHHHHHH
T ss_pred EEE--CCEE------e-ecCCCHHHHHHHHHHh
Confidence 765 5531 1 2445677887777654
No 447
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=86.73 E-value=0.39 Score=45.57 Aligned_cols=57 Identities=12% Similarity=0.146 Sum_probs=39.5
Q ss_pred CcEEEEEEecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCCCccceeeeeeEEEE
Q 009206 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVA 222 (540)
Q Consensus 154 ~~~lV~FYapwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~~~~~~V~~~Ptl~~ 222 (540)
..-++.|..+||+.|++....+++. + ..+-.+|++.+.....+.+.++ ..++|+|.+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~-----~-i~~~~~~i~~~~~~~~l~~~~g------~~~vP~~~~ 225 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK-----G-LSFEEIILGHDATIVSVRAVSG------RTTVPQVFI 225 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH-----T-CCCEEEETTTTCCHHHHHHHTC------CSSSCEEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc-----C-CceEEEECCCchHHHHHHHHhC------CCCcCEEEE
Confidence 3457778899999999877666543 2 2455677765544345777777 789999853
No 448
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.31 E-value=0.58 Score=38.94 Aligned_cols=56 Identities=9% Similarity=-0.016 Sum_probs=34.6
Q ss_pred EEEEEEecCCCCcc------CChHHHHHHHHHHhcc-cceeeeeccchhhhh-HHHHhC--------CCCccceeeeeeE
Q 009206 156 WLIQVYSDGSYLCG------QFSGAWKTIAALLEGI-ANTGMVELGDIRLAT-HLAERK--------PIGQIFFRRGLPS 219 (540)
Q Consensus 156 ~lV~FYapwC~~C~------~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~~-~l~~~~--------~~~~~~~V~~~Pt 219 (540)
-++.|+.+||+.|+ +....+ +.. +.+-.+|.+.++... .+.+.. + ...+|+
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L-------~~~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g------~~tvP~ 75 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFL-------EANKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG------NPLPPQ 75 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHH-------HHTTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSS------SCCSCE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHH-------HHcCCCEEEEECCCCHHHHHHHHHHhcccccccCC------CCCCCE
Confidence 36678899999998 444333 222 367788887554332 244453 4 668897
Q ss_pred EEEeCCC
Q 009206 220 LVAFPPG 226 (540)
Q Consensus 220 l~~f~~g 226 (540)
| |.+|
T Consensus 76 v--fi~g 80 (111)
T 2ct6_A 76 I--FNGD 80 (111)
T ss_dssp E--EETT
T ss_pred E--EECC
Confidence 7 4454
No 449
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=85.10 E-value=1.3 Score=39.57 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=33.9
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+++.|+|...|+++++...+.....+.|..+.+.+.++|..
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4688999999999888886666555557888888888887765
No 450
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=85.03 E-value=0.97 Score=40.04 Aligned_cols=63 Identities=21% Similarity=0.301 Sum_probs=40.1
Q ss_pred CceEEEEEe-CCC---CCCcHHHHHHHHhhcc--CceEEEEEeecccc----------------------HHHHHHcCCC
Q 009206 278 HKVKVIFFS-KTG---ERASPFVRQISRNYWA--YASFAFVLWREEES----------------------SIWWNTFEVE 329 (540)
Q Consensus 278 ~~~~vv~f~-~~~---~~~~~~~~~~A~~~~~--~~~f~~v~~~~~~~----------------------~~l~~~f~V~ 329 (540)
.++.+|.|. .-| ....+.+..++..|.+ .+.+..|....... ..+++.|+|.
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~ 127 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVE 127 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCC
Confidence 356666553 222 2234556667777764 45566665433211 5789999999
Q ss_pred CCCEEEEEeCC
Q 009206 330 SAPAIVFLKDP 340 (540)
Q Consensus 330 ~~Ptlv~fk~~ 340 (540)
..|+++++...
T Consensus 128 ~~Pt~~lid~~ 138 (165)
T 3s9f_A 128 SIPTLIGLNAD 138 (165)
T ss_dssp SSSEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 99999999864
No 451
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=84.94 E-value=0.36 Score=42.01 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=35.8
Q ss_pred cEEEEEEe----cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhh-HHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 155 PWLIQVYS----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 155 ~~lV~FYa----pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~-~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
.+.|..++ |||+.|++....+.+. + +.+..+|.++++... .|.+..| ..++|.| |.+|
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-----g-v~y~~vdI~~d~~~~~~L~~~~G------~~tvP~V--fI~G 98 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC-----G-ERFAYVDILQNPDIRAELPKYAN------WPTFPQL--WVDG 98 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT-----C-SCCEEEEGGGCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc-----C-CceEEEECCCCHHHHHHHHHHHC------CCCcCEE--EECC
Confidence 45554444 9999998877665443 1 367788887554322 2444445 6788986 4555
No 452
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=84.65 E-value=1.6 Score=39.17 Aligned_cols=42 Identities=12% Similarity=0.271 Sum_probs=29.7
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCC----------CChhHHHHHHHhh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGS----------FNNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~----------~~~~~l~~fi~~~ 363 (540)
..+++.|+|...|+++++...+. +.+.|. .+.+.|.+.|+..
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~--i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDERRL--LRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp SHHHHHTTCCEESEEEEECTTCB--EEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred chHHHHcCCCCCCeEEEECCCCc--EEEEEecCCccccccccCHHHHHHHHHHH
Confidence 46889999999999999955443 233343 3567788888764
No 453
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=84.58 E-value=0.27 Score=43.91 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=45.8
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcCC--CCCCEEEEEeCCCCceeeecCC--
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEV--ESAPAIVFLKDPGVKPVVYYGS-- 350 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~V--~~~Ptlv~fk~~~~~~~~y~G~-- 350 (540)
++.+|.|. +-| ....|.+..++..+.....|+.|...... ..++..|++ ...||+++|...+.....+.|.
T Consensus 47 k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~-~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~ 125 (164)
T 1sen_A 47 LPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEE-EPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENG 125 (164)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGG-SCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTS
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCc-hHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCC
Confidence 45566553 322 22334444443333334567777654332 126778888 5599999994333322224452
Q ss_pred --------CChhHHHHHHHh
Q 009206 351 --------FNNSRLSEVMEQ 362 (540)
Q Consensus 351 --------~~~~~l~~fi~~ 362 (540)
.+.+.|.++|+.
T Consensus 126 ~~~~~~~~~~~~~l~~~l~~ 145 (164)
T 1sen_A 126 NPSYKYFYVSAEQVVQGMKE 145 (164)
T ss_dssp CTTSTTCCCSHHHHHHHHHH
T ss_pred ccchhcccCCHHHHHHHHHH
Confidence 567788888765
No 454
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=84.16 E-value=1.2 Score=45.05 Aligned_cols=43 Identities=14% Similarity=0.259 Sum_probs=34.0
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|++
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~ 196 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQ 196 (352)
T ss_dssp SHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4688999999999999996555555557888888888888765
No 455
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=83.92 E-value=1.1 Score=38.02 Aligned_cols=63 Identities=25% Similarity=0.423 Sum_probs=39.1
Q ss_pred ceEEEEEe-CCC---CCCcHHHHHHHHhhc--cCceEEEEEeeccc----------------------cHHHHHHcCCCC
Q 009206 279 KVKVIFFS-KTG---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVES 330 (540)
Q Consensus 279 ~~~vv~f~-~~~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~V~~ 330 (540)
++.+|.|. ..| ....+.+..++..|. ..+.+..|...... ...+++.|+|..
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 108 (144)
T 1o73_A 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVES 108 (144)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCS
T ss_pred CEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCC
Confidence 46566553 222 223455566666665 34566666544321 246899999999
Q ss_pred CCEEEEEe-CCC
Q 009206 331 APAIVFLK-DPG 341 (540)
Q Consensus 331 ~Ptlv~fk-~~~ 341 (540)
.|+++++. ..+
T Consensus 109 ~Pt~~lid~~~G 120 (144)
T 1o73_A 109 IPTLITINADTG 120 (144)
T ss_dssp SSEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 99999998 444
No 456
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=83.91 E-value=1.2 Score=40.10 Aligned_cols=44 Identities=2% Similarity=-0.045 Sum_probs=32.4
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceee---------ecCCCChhHHHHHHHhh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVV---------YYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~---------y~G~~~~~~l~~fi~~~ 363 (540)
..+++.|+|...|+++++...+..... +.|..+.+.|.+.|+..
T Consensus 120 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 120 QEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 468899999999999999655543322 24666788888888764
No 457
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=83.88 E-value=1.2 Score=38.08 Aligned_cols=64 Identities=25% Similarity=0.415 Sum_probs=40.1
Q ss_pred CceEEEEEeC-CC---CCCcHHHHHHHHhhc--cCceEEEEEeeccc----------------------cHHHHHHcCCC
Q 009206 278 HKVKVIFFSK-TG---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVE 329 (540)
Q Consensus 278 ~~~~vv~f~~-~~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~V~ 329 (540)
.++.+|.|.. .| ....+.+..++..|. ..+.+..|...+.. ...++++|+|.
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE 107 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC
Confidence 3466665532 22 223455666777776 35566666654321 25789999999
Q ss_pred CCCEEEEEe-CCC
Q 009206 330 SAPAIVFLK-DPG 341 (540)
Q Consensus 330 ~~Ptlv~fk-~~~ 341 (540)
+.|+++++. ..+
T Consensus 108 ~~Pt~~lid~~~G 120 (146)
T 1o8x_A 108 SIPTLIGVDADSG 120 (146)
T ss_dssp SSSEEEEEETTTC
T ss_pred CCCEEEEEECCCC
Confidence 999999997 444
No 458
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=83.44 E-value=0.64 Score=36.50 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=35.0
Q ss_pred EEEEEec----CCCCccCChHHHHHHHHHHhcccceeeeecc-----chhh-hhHHHHhCCCCccceee-----eeeEEE
Q 009206 157 LIQVYSD----GSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIRL-ATHLAERKPIGQIFFRR-----GLPSLV 221 (540)
Q Consensus 157 lV~FYap----wC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~-----~~~~-~~~l~~~~~~~~~~~V~-----~~Ptl~ 221 (540)
++.|..+ ||++|++....+++. + +.+-.+|.+ +++. ...|.+..| .. ++|+|.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~-----g-i~y~~idI~~~~~~~~~~~~~~l~~~~g------~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK-----K-QPFEFINIMPEKGVFDDEKIAELLTKLG------RDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT-----T-CCEEEEESCSBTTBCCHHHHHHHHHHHT------CSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc-----C-CCEEEEEeeccccccCHHHHHHHHHHhC------CCCCCCCccCEEE
Confidence 4567789 999998766555442 2 256666666 3322 234666666 66 899874
Q ss_pred EeCCC
Q 009206 222 AFPPG 226 (540)
Q Consensus 222 ~f~~g 226 (540)
+ .+|
T Consensus 70 i-~~g 73 (87)
T 1aba_A 70 A-PDG 73 (87)
T ss_dssp C-TTS
T ss_pred E-ECC
Confidence 3 255
No 459
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=82.66 E-value=1.9 Score=37.43 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=31.7
Q ss_pred HHHHHcCCCCCC---------------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 321 ~l~~~f~V~~~P---------------tlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
.+++.|+|...| +++++...+.....+.|..+.+.|.+.|+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 488899998778 777776656555557888888888888765
No 460
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=82.63 E-value=1.3 Score=37.71 Aligned_cols=63 Identities=21% Similarity=0.328 Sum_probs=39.6
Q ss_pred ceEEEEEeC-CC---CCCcHHHHHHHHhhc--cCceEEEEEeeccc----------------------cHHHHHHcCCCC
Q 009206 279 KVKVIFFSK-TG---ERASPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVES 330 (540)
Q Consensus 279 ~~~vv~f~~-~~---~~~~~~~~~~A~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~V~~ 330 (540)
++.+|.|.. .| ....+.+..++..|. ..+.+..|...... ...+++.|+|..
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (144)
T 1i5g_A 29 KTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKS 108 (144)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCS
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCC
Confidence 466665532 22 223455666777776 35566666644321 257899999999
Q ss_pred CCEEEEEe-CCC
Q 009206 331 APAIVFLK-DPG 341 (540)
Q Consensus 331 ~Ptlv~fk-~~~ 341 (540)
.|+++++. ..+
T Consensus 109 ~P~~~lid~~~G 120 (144)
T 1i5g_A 109 IPTLVGVEADSG 120 (144)
T ss_dssp SSEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 99999996 444
No 461
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=82.07 E-value=1.3 Score=40.53 Aligned_cols=55 Identities=9% Similarity=0.059 Sum_probs=41.1
Q ss_pred CCcEEEEEE-ecCCCCcc-CChHHHHHHHHHH-hccc--ceeeeeccchhhhhHHHHhCC
Q 009206 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALL-EGIA--NTGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 153 ~~~~lV~FY-apwC~~C~-~l~p~~~~~A~~l-~~~~--~v~~Vdc~~~~~~~~l~~~~~ 207 (540)
++.+++.|| +.||+-|. .-.+.|.+.+.++ +..+ .|..|.++........|++.+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~ 102 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMD 102 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcC
Confidence 455566666 56999999 7889999999999 6554 388888886555555788877
No 462
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=81.75 E-value=0.71 Score=38.48 Aligned_cols=55 Identities=9% Similarity=0.044 Sum_probs=34.3
Q ss_pred EEEEe-----cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhh-HHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 158 IQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 158 V~FYa-----pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~-~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
|.|.. |||++|++....+.+. + +.+-.+|.+.++... .|.+..| ...+|+| |.+|
T Consensus 19 vlf~kg~~~~~~Cp~C~~ak~~L~~~-----g-i~y~~~di~~d~~~~~~l~~~~g------~~tvP~i--fi~g 79 (111)
T 3zyw_A 19 MLFMKGTPQEPRCGFSKQMVEILHKH-----N-IQFSSFDIFSDEEVRQGLKAYSS------WPTYPQL--YVSG 79 (111)
T ss_dssp EEEESBCSSSBSSHHHHHHHHHHHHT-----T-CCCEEEEGGGCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred EEEEecCCCCCcchhHHHHHHHHHHc-----C-CCeEEEECcCCHHHHHHHHHHHC------CCCCCEE--EECC
Confidence 45666 9999998877555432 2 256677877554432 2333335 6689987 4455
No 463
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=81.68 E-value=3.5 Score=36.70 Aligned_cols=69 Identities=9% Similarity=0.159 Sum_probs=42.9
Q ss_pred HHHHHHHHhhc-cCceEEEEEeecc--c-cHHHHHHcCCC-----------------------CCCEEEEEeCCCCceee
Q 009206 294 PFVRQISRNYW-AYASFAFVLWREE--E-SSIWWNTFEVE-----------------------SAPAIVFLKDPGVKPVV 346 (540)
Q Consensus 294 ~~~~~~A~~~~-~~~~f~~v~~~~~--~-~~~l~~~f~V~-----------------------~~Ptlv~fk~~~~~~~~ 346 (540)
+.+..+...|. ..+.+..|..... + ...+++++++. +.|+++++...+.....
T Consensus 80 ~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 80 PALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 44455565564 3455666654322 1 14567777774 78999999655555445
Q ss_pred ecCCCC--hhHHHHHHHh
Q 009206 347 YYGSFN--NSRLSEVMEQ 362 (540)
Q Consensus 347 y~G~~~--~~~l~~fi~~ 362 (540)
+.|..+ .++|.++|+.
T Consensus 160 ~~g~~~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 160 IAGPAEWASEDALKLIRA 177 (186)
T ss_dssp EESCCCTTSHHHHHHHHH
T ss_pred EecCCccCHHHHHHHHHH
Confidence 677654 6778888876
No 464
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=81.24 E-value=3.4 Score=36.07 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=31.5
Q ss_pred HHHHHcCCCCCC---------------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 321 ~l~~~f~V~~~P---------------tlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
.+++.|+|...| +++++-..+.....+.|..+.+.|.+.|+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 588899998766 777776555555557888888888888765
No 465
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=81.06 E-value=1.6 Score=34.75 Aligned_cols=57 Identities=7% Similarity=0.005 Sum_probs=34.0
Q ss_pred EEEEEecCCCCc------cCChHHHHHHHHHHhcc-cceeeeeccchhhh-hHHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 157 LIQVYSDGSYLC------GQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 157 lV~FYapwC~~C------~~l~p~~~~~A~~l~~~-~~v~~Vdc~~~~~~-~~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
++.|+++||+.| ++..-.++ .. +.+-.+|.+.++.. ..+.+..|.+ ...+|+| |.+|
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~-------~~~i~~~~~di~~~~~~~~~l~~~~g~~----~~~vP~i--fi~g 68 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD-------GKRIQYQLVDISQDNALRDEMRTLAGNP----KATPPQI--VNGN 68 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH-------HTTCCCEEEETTSCHHHHHHHHHHTTCT----TCCSCEE--EETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH-------HCCCceEEEECCCCHHHHHHHHHHhCCC----CCCCCEE--EECC
Confidence 567889999999 55443332 22 36778888755332 2355555521 3589987 4455
No 466
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=81.04 E-value=1.1 Score=42.11 Aligned_cols=53 Identities=8% Similarity=-0.071 Sum_probs=41.5
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHH
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAE 204 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~ 204 (540)
.++.+++.|| +.||+.|..-.+.+.+...+++... .+..|.++........++
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~ 105 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTN 105 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHT
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHH
Confidence 3577888999 9999999999999999999998765 788888885444333343
No 467
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=79.91 E-value=2.5 Score=39.73 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=42.5
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-ceeeeeccchhhhhHHHHh
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-NTGMVELGDIRLATHLAER 205 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~v~~Vdc~~~~~~~~l~~~ 205 (540)
.++.+++.|| ++||+.|..-...+.+...+++... .|..|.++........+++
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~ 110 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQ 110 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHS
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhh
Confidence 3577888899 8999999999999999999998765 8888888855444444444
No 468
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=79.85 E-value=3.4 Score=35.68 Aligned_cols=34 Identities=6% Similarity=0.098 Sum_probs=25.2
Q ss_pred HHHHcCCCCCCEEEEEeCCCCceeeecCCCChhH
Q 009206 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (540)
Q Consensus 322 l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~ 355 (540)
+.+.|++...|+++++...+.....+.|..+.++
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~ 138 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGENIKDLDE 138 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHH
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCCHHHHHH
Confidence 8899999999999999765654444567655444
No 469
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=79.16 E-value=0.82 Score=42.33 Aligned_cols=42 Identities=14% Similarity=0.168 Sum_probs=29.9
Q ss_pred CCCcEEEEEEecCCCCccCChHHH-HHHHHHH--hcccceeeeec
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL--EGIANTGMVEL 193 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~-~~~A~~l--~~~~~v~~Vdc 193 (540)
+.++.+|+|+...|+||+++.+.. ..+.+.+ .|.+++...+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 467889999999999999998875 5555555 34444444443
No 470
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=79.10 E-value=2.8 Score=37.83 Aligned_cols=56 Identities=2% Similarity=-0.064 Sum_probs=42.8
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhccc-c-eeeeeccchhhhhHHHHhCC
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIA-N-TGMVELGDIRLATHLAERKP 207 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~-~-v~~Vdc~~~~~~~~l~~~~~ 207 (540)
.++.+++.|| +.||+-|..-.+.|.+.+.+++..+ . |..|.++........|++.+
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVD 99 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHC
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 3455566666 4699999999999999999998654 4 88888886655556788776
No 471
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=79.05 E-value=1.8 Score=34.21 Aligned_cols=47 Identities=13% Similarity=0.177 Sum_probs=33.8
Q ss_pred EEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 309 FAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 309 f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+..|++. +.++++++||+. .|+|++ .++. .+ . |.++.+.|.+++...
T Consensus 29 ~~~vdid--~~~~l~~~~g~~-vPtl~~-~~G~--~v-~-g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 29 FFSVFID--DDAALESAYGLR-VPVLRD-PMGR--EL-D-WPFDAPRLRAWLDAA 75 (87)
T ss_dssp EEEEECT--TCHHHHHHHTTT-CSEEEC-TTCC--EE-E-SCCCHHHHHHHHHTC
T ss_pred eEEEECC--CCHHHHHHhCCC-cCeEEE-ECCE--EE-e-CCCCHHHHHHHHHHH
Confidence 4555543 246799999997 999888 5432 22 2 888999999999763
No 472
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=78.47 E-value=2 Score=47.39 Aligned_cols=49 Identities=12% Similarity=0.082 Sum_probs=37.9
Q ss_pred CCCccccccccCccCCCCH--HHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHH
Q 009206 33 RSFPPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYEL 86 (540)
Q Consensus 33 ~~~~~~~y~iLgv~~~a~~--~~Ik~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~ 86 (540)
.+...+||.+||++.+... .+|++|||+|++..+++ .+++..+..|+.+
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHhccc
Confidence 3445679999999766555 66999999999976554 5688888888765
No 473
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=78.02 E-value=1.2 Score=36.74 Aligned_cols=50 Identities=14% Similarity=0.113 Sum_probs=31.3
Q ss_pred cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhh-hHHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 163 pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~-~~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
|||++|++....+.+. + +.+-.+|.++++.. ..|.+..+ ...+|++ |.+|
T Consensus 31 p~Cp~C~~ak~~L~~~-----g-i~~~~~dI~~~~~~~~~l~~~~g------~~tvP~i--fi~g 81 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL-----N-VPFEDVNILENEMLRQGLKEYSN------WPTFPQL--YIGG 81 (109)
T ss_dssp BSSHHHHHHHHHHHHT-----T-CCCEEEEGGGCHHHHHHHHHHHT------CSSSCEE--EETT
T ss_pred CCChhHHHHHHHHHHc-----C-CCcEEEECCCCHHHHHHHHHHHC------CCCCCeE--EECC
Confidence 6999998877665543 1 25677777654432 23444445 6799976 4455
No 474
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=76.54 E-value=1.2 Score=37.56 Aligned_cols=51 Identities=8% Similarity=0.088 Sum_probs=30.5
Q ss_pred cCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhh-HHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 163 pwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~-~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
|||++|++....+++. +...+-.+|+++++... .|.+..+ ...+|+| |.+|
T Consensus 33 p~Cp~C~~ak~lL~~~-----gv~~~~~vdV~~d~~~~~~l~~~tg------~~tvP~v--fI~g 84 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH-----GVRDYAAYNVLDDPELRQGIKDYSN------WPTIPQV--YLNG 84 (118)
T ss_dssp BSSHHHHHHHHHHHHT-----TCCCCEEEESSSCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CccHHHHHHHHHHHHc-----CCCCCEEEEcCCCHHHHHHHHHHhC------CCCcCeE--EECC
Confidence 6999998876555542 11026677777554432 2334435 6789987 4455
No 475
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=76.11 E-value=1.3 Score=41.88 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=29.7
Q ss_pred CCCcEEEEEEecCCCCccCChHH-HHHHHHHH--hcccceeeee
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGA-WKTIAALL--EGIANTGMVE 192 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~-~~~~A~~l--~~~~~v~~Vd 192 (540)
+.++.+|+|....|++|+++.|. ..++.+.+ .|.+++.-.+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~ 81 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRH 81 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 45678999999999999999985 56777666 3444443333
No 476
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=75.94 E-value=2.1 Score=36.08 Aligned_cols=51 Identities=10% Similarity=0.039 Sum_probs=32.0
Q ss_pred cCCCCccCChHHHHHHHHHHhccc--ceeeeeccchhhh-hHHHHhCCCCccceeeeeeEEEEeCCC
Q 009206 163 DGSYLCGQFSGAWKTIAALLEGIA--NTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (540)
Q Consensus 163 pwC~~C~~l~p~~~~~A~~l~~~~--~v~~Vdc~~~~~~-~~l~~~~~~~~~~~V~~~Ptl~~f~~g 226 (540)
|||++|++....+.+. +.. .+..+|..+++.. ..|.+..| ...+|.| |.+|
T Consensus 29 p~Cp~C~~ak~lL~~~-----gv~~~~~~~~dv~~~~~~~~~l~~~sg------~~tvP~v--fI~g 82 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ-----GVDPAKFAAYNVLEDPELREGIKEFSE------WPTIPQL--YVNK 82 (121)
T ss_dssp BCTTHHHHHHHHHHHH-----TBCGGGEEEEECTTCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CCCccHHHHHHHHHHc-----CCCcceEEEEEecCCHHHHHHHHHHhC------CCCCCeE--EECC
Confidence 6999999887666654 221 2667777755433 23444445 6689987 4455
No 477
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=75.67 E-value=0.83 Score=45.08 Aligned_cols=71 Identities=8% Similarity=0.035 Sum_probs=44.7
Q ss_pred EEEEeC---CCCCCcHHHHHHHHhhccCceEEEEEeecc-c-cHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHH
Q 009206 282 VIFFSK---TGERASPFVRQISRNYWAYASFAFVLWREE-E-SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (540)
Q Consensus 282 vv~f~~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~-~-~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l 356 (540)
+.|+.+ .++...|.+..+|.++ .+..+...+. + .++++++|+|+++||+++ + ++ .|.|..+.++|
T Consensus 202 V~F~A~WC~~Ck~l~p~le~lA~~l----~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~-G~---~~~G~~~~~~L 271 (291)
T 3kp9_A 202 TMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWII--N-GR---TYTGVRSLEAL 271 (291)
T ss_dssp EEEECTTCHHHHHHHHHHGGGGGGS----CEEESCSSCSSSCCCHHHHTTTCCSTTEEEE--T-TE---EEESCCCHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHc----CEEEEeecCchhhHHHHHHHcCCcccCeEEE--C-CE---EecCCCCHHHH
Confidence 555543 2334456666666543 2333322221 2 468999999999999655 3 32 38999999999
Q ss_pred HHHHHh
Q 009206 357 SEVMEQ 362 (540)
Q Consensus 357 ~~fi~~ 362 (540)
.+|+.-
T Consensus 272 ~~~l~~ 277 (291)
T 3kp9_A 272 AVASGY 277 (291)
T ss_dssp HHHTCC
T ss_pred HHHHCC
Confidence 999753
No 478
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=75.28 E-value=11 Score=30.16 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=36.6
Q ss_pred cCceEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 305 ~~~~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..+.|..++..+.+.++++.+|| .+.|+|+ .++. .+ ..|.++.+.|.++|...
T Consensus 42 ~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~--~~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 42 DRFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQ--FL-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp SSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSS--EE-EESSCCHHHHHHHHHSS
T ss_pred hCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCE--EE-EecCCCHHHHHHHHHHH
Confidence 34677777765323478999999 8999763 4432 22 34557889999999764
No 479
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=74.45 E-value=1.1 Score=40.80 Aligned_cols=32 Identities=3% Similarity=-0.194 Sum_probs=26.5
Q ss_pred cCCCcEEEEEEecCCCCccCChHHHHHHHHHH
Q 009206 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALL 182 (540)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~l~p~~~~~A~~l 182 (540)
.+..+.+|+|....|+||+++.+...++.++.
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~ 43 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQA 43 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHh
Confidence 45678899999999999999999888766554
No 480
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=74.31 E-value=3.6 Score=34.64 Aligned_cols=37 Identities=14% Similarity=0.339 Sum_probs=27.5
Q ss_pred HHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 324 NTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 324 ~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
+.|+|...|+++++...+. +.+ +..+.+.|.++|++.
T Consensus 103 ~~~~v~~~P~~~lid~~G~--i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 103 QLYDIRATPTIYLLDGRKR--VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp TCSCCCSSSEEEEECTTCB--EEE-CSCCHHHHHHHHHC-
T ss_pred HHcCCCCCCeEEEECCCCC--EEe-cCCCHHHHHHHHHHH
Confidence 3899999999999965443 233 567889999998764
No 481
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=73.11 E-value=1.1 Score=39.67 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=32.1
Q ss_pred eEEEEEeeccccHHHHHHcCCCCCCEEEEEeCCCCceeeecCC-------CChhHHHHHHH
Q 009206 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-------FNNSRLSEVME 361 (540)
Q Consensus 308 ~f~~v~~~~~~~~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~-------~~~~~l~~fi~ 361 (540)
.|..|.+.+ +...++.++++.+.||+++|+..+..-....|. +..+.+..+++
T Consensus 79 ~fv~V~vD~-e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~ 138 (151)
T 3ph9_A 79 KFIMLNLMH-ETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIE 138 (151)
T ss_dssp TCEEEEESS-CCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHH
T ss_pred CeEEEEecC-CchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHH
Confidence 466666532 223467789999999999998545432234554 44444444444
No 482
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=72.39 E-value=5.3 Score=33.66 Aligned_cols=37 Identities=11% Similarity=0.248 Sum_probs=26.3
Q ss_pred HHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHH
Q 009206 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (540)
Q Consensus 322 l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~ 361 (540)
+.+.|+|.+.|+++++...+. +++.+ .+.+.|.+||+
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 105 NKNLYDLRAIPTLYLLDKNKT--VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp HTTCSCCTTCSEEEEECTTCB--EEEEE-ECHHHHHHHHH
T ss_pred hhhhcCCCcCCeEEEECCCCc--EEecC-CCHHHHHHHHh
Confidence 577899999999999965443 33332 25678888875
No 483
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=72.23 E-value=1.9 Score=42.98 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=54.4
Q ss_pred CCCcEEEEEE-ecCCCCccCChHHHHHHHHHHhcccceeeeeccchhhhhHHHHhCCC------------Cccceee---
Q 009206 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI------------GQIFFRR--- 215 (540)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~l~p~~~~~A~~l~~~~~v~~Vdc~~~~~~~~l~~~~~~------------~~~~~V~--- 215 (540)
.++++++.|| +.||+.|..-.+.+.+. ..++ ..|..|+++........++++++ .+.|+|.
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~~~-~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~ 99 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSRE--NFEK-AQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENG 99 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHHS--CCTT-EEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHH--hhCC-CEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCC
Confidence 3678899999 56899997655555331 1122 35566676644444445555443 2234473
Q ss_pred -eeeEEEEe-CCCCCCCCCccccc---CCCCHHHHHHHHHHh
Q 009206 216 -GLPSLVAF-PPGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (540)
Q Consensus 216 -~~Ptl~~f-~~g~~~~~~~~~y~---G~~~~~~i~~fi~~~ 252 (540)
.+|+..++ ++|.. ...|. ....++.|.+++.+.
T Consensus 100 ~~~r~tfiId~~G~i----~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFV----RKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp EECCEEEEECTTSBE----EEEEESCCSTTHHHHHHHHHHHH
T ss_pred cCccEEEEECCCCEE----EEEEeCCCccccHHHHHHHHhhh
Confidence 46776666 44532 12233 345688999998765
No 484
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=69.77 E-value=3.1 Score=37.23 Aligned_cols=79 Identities=6% Similarity=-0.124 Sum_probs=47.2
Q ss_pred ceEEEEEe-C---CCCCCcHHHHHHHHhhccCceEEEEEeeccccHHHHHHcC---CCCCCEEEEEeCCCCceeeecCCC
Q 009206 279 KVKVIFFS-K---TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFE---VESAPAIVFLKDPGVKPVVYYGSF 351 (540)
Q Consensus 279 ~~~vv~f~-~---~~~~~~~~~~~~A~~~~~~~~f~~v~~~~~~~~~l~~~f~---V~~~Ptlv~fk~~~~~~~~y~G~~ 351 (540)
++.+|.|. + .|....|.+..++..+. .+.|..|... +.++++.+|+ +.+.||+++|++++.....+ |..
T Consensus 55 k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~ 130 (167)
T 1z6n_A 55 RYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF-VER 130 (167)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESS
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCC
Confidence 46566553 2 22234677777777663 4556555432 2356888887 99999999998765543333 543
Q ss_pred ChhHHHHHHHh
Q 009206 352 NNSRLSEVMEQ 362 (540)
Q Consensus 352 ~~~~l~~fi~~ 362 (540)
. ..+.+.+.+
T Consensus 131 p-~~~~~~i~~ 140 (167)
T 1z6n_A 131 P-QAVLDGGPQ 140 (167)
T ss_dssp C-HHHHHHCHH
T ss_pred C-HHHHHhHHH
Confidence 3 445555544
No 485
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=69.02 E-value=4.5 Score=35.19 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=24.1
Q ss_pred CCCCEEEEEeCCCCceeeecCCC--ChhHHHHHHHh
Q 009206 329 ESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (540)
Q Consensus 329 ~~~Ptlv~fk~~~~~~~~y~G~~--~~~~l~~fi~~ 362 (540)
.+.|+++++. .+.....+.|.. +.+.|.+.|++
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 4579999998 665555567766 77888888765
No 486
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=66.17 E-value=13 Score=32.33 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=26.9
Q ss_pred HcCCCCCC------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 325 TFEVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 325 ~f~V~~~P------tlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
.|++.+.| +.+++-..+.....+.|..+.+.|.+.|+.
T Consensus 122 ~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 122 KSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp SCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred cCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 46777788 777775555554456787788888888765
No 487
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=66.06 E-value=9.4 Score=34.41 Aligned_cols=43 Identities=5% Similarity=0.066 Sum_probs=31.2
Q ss_pred HHHHHHcCCC-----CCCEEEEEeCCCCceeeecCCC----ChhHHHHHHHh
Q 009206 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~-----~~Ptlv~fk~~~~~~~~y~G~~----~~~~l~~fi~~ 362 (540)
..+.+.|++. ..|+.+++...+.....+.|.. +.++|.+.|+.
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4688999998 8999999976665444455543 45678888775
No 488
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=65.00 E-value=2.6 Score=39.03 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=28.6
Q ss_pred HHH-HHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHhh
Q 009206 321 IWW-NTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (540)
Q Consensus 321 ~l~-~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~~ 363 (540)
..+ .++||.+.|++++ ++. .+.|..+.+.|.+.|...
T Consensus 158 ~~a~~~~GV~GtPtfvv---ng~---~~~G~~~~e~l~~~i~~~ 195 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI---DGI---LLAGTHDWASLRPQILAR 195 (205)
T ss_dssp HHHHHHHCCCSSSEEEE---TTE---ECTTCCSHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE---CCE---EEeCCCCHHHHHHHHHHH
Confidence 356 8899999999988 332 368888888898888763
No 489
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=64.98 E-value=2.9 Score=37.55 Aligned_cols=31 Identities=10% Similarity=0.149 Sum_probs=25.0
Q ss_pred CCCcEEEEEEecCCCCccCChHHH-HHHHHHH
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL 182 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~-~~~A~~l 182 (540)
+.++.++.|+.+.|++|..+.+.. .++.+.+
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~ 41 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNY 41 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHh
Confidence 456789999999999999999987 4566655
No 490
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=64.55 E-value=12 Score=34.59 Aligned_cols=70 Identities=10% Similarity=0.188 Sum_probs=45.0
Q ss_pred CcHHHHHHHHhhccC-ceEEEEEeec---------------------------cccHHHHHHcCCCCCCEEEEEeCCCCc
Q 009206 292 ASPFVRQISRNYWAY-ASFAFVLWRE---------------------------EESSIWWNTFEVESAPAIVFLKDPGVK 343 (540)
Q Consensus 292 ~~~~~~~~A~~~~~~-~~f~~v~~~~---------------------------~~~~~l~~~f~V~~~Ptlv~fk~~~~~ 343 (540)
..+.+..+..+|.+. +.+..|...+ .....+++.|+|...|+++++...+.
T Consensus 77 ~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~- 155 (218)
T 3u5r_E 77 IREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERR- 155 (218)
T ss_dssp THHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCB-
T ss_pred HHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCc-
Confidence 456666677777554 5566665421 11246899999999999999955443
Q ss_pred eeeecC-----------CCChhHHHHHHHhh
Q 009206 344 PVVYYG-----------SFNNSRLSEVMEQN 363 (540)
Q Consensus 344 ~~~y~G-----------~~~~~~l~~fi~~~ 363 (540)
+.|.| ..+.+.|.+.|+..
T Consensus 156 -i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 156 -LVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp -EEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred -EEEeccccccccccccccCHHHHHHHHHHH
Confidence 34543 23467788888763
No 491
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=63.06 E-value=16 Score=32.35 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=30.8
Q ss_pred HHHHHHcCCC------CCCEEEEEeCCCCceeeecCCC----ChhHHHHHHHh
Q 009206 320 SIWWNTFEVE------SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~------~~Ptlv~fk~~~~~~~~y~G~~----~~~~l~~fi~~ 362 (540)
..+++.|++. ..|+++++...+.....+.|.. +.++|.+.|+.
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4688899998 7899999965555444455543 56778888775
No 492
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=61.80 E-value=15 Score=32.85 Aligned_cols=44 Identities=9% Similarity=-0.059 Sum_probs=31.7
Q ss_pred HHHHHHcCCC-----CCCEEEEEeCCCCceeeecCCC----ChhHHHHHHHhh
Q 009206 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~-----~~Ptlv~fk~~~~~~~~y~G~~----~~~~l~~fi~~~ 363 (540)
..+.+.|++. ..|+++++...+.....+.|.. +.++|.+.|+..
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4688899998 8999999976555444455543 567788888763
No 493
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=60.89 E-value=6.9 Score=35.80 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=33.3
Q ss_pred HHHhCCCCccceeeeeeEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 009206 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (540)
Q Consensus 202 l~~~~~~~~~~~V~~~Ptl~~f~~g~~~~~~~~~y~G~~~~~~i~~fi~~~v 253 (540)
+++++| |.|+||++++.+|+. ...+.|..+.+.+.+++.+.+
T Consensus 168 ~a~~~g------v~g~Pt~~i~~~G~~----~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 168 RVAQWG------ISGFPALVVESGTDR----YLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHTT------CCSSSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHcC------CcccceEEEEECCEE----EEeccCCCCHHHHHHHHHHHH
Confidence 677888 999999999888742 124689899999999987764
No 494
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=60.11 E-value=2.8 Score=40.84 Aligned_cols=28 Identities=11% Similarity=-0.024 Sum_probs=23.6
Q ss_pred CCCcEEEEEEecCCCCccCChHHHHHHH
Q 009206 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIA 179 (540)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~l~p~~~~~A 179 (540)
+.+..++.|.-|.|++|+++.+..++..
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l 173 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHL 173 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHh
Confidence 4678999999999999999988777543
No 495
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=58.46 E-value=18 Score=32.24 Aligned_cols=36 Identities=6% Similarity=0.068 Sum_probs=24.4
Q ss_pred CCCCCC------EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 327 EVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 327 ~V~~~P------tlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
++.+.| +.+++...+.....+.|..+.+.|.+.|++
T Consensus 141 ~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 182 (190)
T 2vup_A 141 GILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIP 182 (190)
T ss_dssp CGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred CcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 555567 667765555544456788788888888765
No 496
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=57.73 E-value=9.8 Score=30.75 Aligned_cols=41 Identities=10% Similarity=0.031 Sum_probs=25.1
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCC---ChhHHHHHHHhh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF---NNSRLSEVMEQN 363 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~---~~~~l~~fi~~~ 363 (540)
..++++|++.+.|++ |.+ +..-..+.|.. +...|.++++..
T Consensus 63 ~~l~~~~~v~~~Pt~--~~~-g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV--FIG-GKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHSCCSSCEE--EET-TEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHhCCCCcCEE--EEC-CEEECChHHHHHHHhCChHHHHHHHc
Confidence 468999999999998 333 22211123322 445677887763
No 497
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=56.55 E-value=19 Score=30.86 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=22.5
Q ss_pred CCCC---EEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 329 ESAP---AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 329 ~~~P---tlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
...| +.+++...+.....+.|..+.+.|.+.|++
T Consensus 129 ~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (170)
T 2p5q_A 129 DDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQ 165 (170)
T ss_dssp SCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred CcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 3456 777775555544456787777788888765
No 498
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=55.76 E-value=10 Score=31.89 Aligned_cols=40 Identities=15% Similarity=0.359 Sum_probs=27.1
Q ss_pred HHHHHHcCCCCCCEEEEEeCCCCceeeecCCCChhHHHHHHHh
Q 009206 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~~~~~~y~G~~~~~~l~~fi~~ 362 (540)
..+.+.|+|...|+.+++...+.. .+.+ ...++|.+++++
T Consensus 103 ~~~~~~~~v~~~P~~~lid~~G~i--~~~~-~~~~~l~~~l~~ 142 (143)
T 4fo5_A 103 SELYKKYDLRKGFKNFLINDEGVI--IAAN-VTPEKLTEILKA 142 (143)
T ss_dssp SHHHHHTTGGGCCCEEEECTTSBE--EEES-CCHHHHHHHHTC
T ss_pred hHHHHHcCCCCCCcEEEECCCCEE--EEcc-CCHHHHHHHHHh
Confidence 358899999999999988654432 2322 356677777653
No 499
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=59.13 E-value=2.7 Score=35.37 Aligned_cols=22 Identities=27% Similarity=0.435 Sum_probs=18.0
Q ss_pred HHHHHHcCCCCCCEEEEEeCCC
Q 009206 320 SIWWNTFEVESAPAIVFLKDPG 341 (540)
Q Consensus 320 ~~l~~~f~V~~~Ptlv~fk~~~ 341 (540)
..+++.|+|.+.|+++++...+
T Consensus 98 ~~~~~~~~v~~~P~~~lid~~G 119 (143)
T 2lus_A 98 SNVTAKYGITGIPALVIVKKDG 119 (143)
Confidence 4688999999999999997544
No 500
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=53.88 E-value=7.2 Score=35.10 Aligned_cols=42 Identities=12% Similarity=-0.113 Sum_probs=26.8
Q ss_pred HHHhhccCceEEEEEeeccccHHHHHHc--------CCCCCCEEEEEeCCCC
Q 009206 299 ISRNYWAYASFAFVLWREEESSIWWNTF--------EVESAPAIVFLKDPGV 342 (540)
Q Consensus 299 ~A~~~~~~~~f~~v~~~~~~~~~l~~~f--------~V~~~Ptlv~fk~~~~ 342 (540)
++..+.+.+.++.|+. .+.+++.+.| |+.+.|++++|.+.+.
T Consensus 67 va~~l~~~fv~ikVD~--de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~ 116 (173)
T 3ira_A 67 VAGLMNEAFVSIKVDR--EERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK 116 (173)
T ss_dssp HHHHHHHHCEEEEEET--TTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC
T ss_pred HHHHHHhcCceeeeCC--cccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC
Confidence 3444433444455543 2346788888 9999999999975443
Done!