Query 009208
Match_columns 540
No_of_seqs 662 out of 4876
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 21:16:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009208hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.2E-49 1.1E-53 388.2 13.3 204 301-508 13-233 (299)
2 4gt4_A Tyrosine-protein kinase 100.0 4.6E-49 1.6E-53 388.8 14.0 204 302-508 27-250 (308)
3 4aoj_A High affinity nerve gro 100.0 1.9E-48 6.7E-53 387.9 15.5 204 301-508 41-263 (329)
4 3omv_A RAF proto-oncogene seri 100.0 3.1E-48 1E-52 381.3 16.1 200 300-508 35-239 (307)
5 4b9d_A Serine/threonine-protei 100.0 3.5E-48 1.2E-52 386.3 16.5 203 301-509 24-228 (350)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-48 4.9E-53 382.8 13.3 202 301-509 32-237 (311)
7 4fih_A Serine/threonine-protei 100.0 2E-48 6.7E-53 387.5 11.9 198 301-508 74-272 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 9.5E-48 3.3E-52 381.5 11.7 195 301-508 58-258 (336)
9 4fie_A Serine/threonine-protei 100.0 2.8E-47 9.5E-52 388.5 13.6 198 301-508 151-349 (423)
10 3fpq_A Serine/threonine-protei 100.0 1.6E-46 5.5E-51 366.5 17.1 196 304-508 29-231 (290)
11 3ubd_A Ribosomal protein S6 ki 100.0 7.7E-48 2.7E-52 377.6 7.8 201 301-509 24-229 (304)
12 3hyh_A Carbon catabolite-derep 100.0 1.7E-46 5.8E-51 363.1 15.7 198 301-508 13-214 (275)
13 4ase_A Vascular endothelial gr 100.0 6.1E-47 2.1E-51 380.1 12.5 215 291-508 54-290 (353)
14 3hmm_A TGF-beta receptor type- 100.0 2.9E-46 9.9E-51 369.4 13.9 199 301-507 3-219 (303)
15 4g31_A Eukaryotic translation 100.0 2.5E-45 8.5E-50 361.1 14.9 200 301-507 5-228 (299)
16 4b99_A Mitogen-activated prote 100.0 2.6E-43 8.8E-48 359.9 15.3 201 301-509 54-266 (398)
17 3uim_A Brassinosteroid insensi 100.0 4.2E-43 1.4E-47 351.6 16.2 254 274-527 3-257 (326)
18 4f9c_A Cell division cycle 7-r 100.0 1.1E-42 3.7E-47 351.5 16.7 199 298-509 18-250 (361)
19 3v5w_A G-protein coupled recep 100.0 8.8E-43 3E-47 370.9 15.3 200 300-509 188-394 (689)
20 3uto_A Twitchin; kinase, muscl 100.0 3.9E-41 1.3E-45 360.2 17.4 200 300-508 156-358 (573)
21 4aw2_A Serine/threonine-protei 100.0 7.3E-41 2.5E-45 347.0 12.2 212 293-510 66-285 (437)
22 2qkw_B Protein kinase; three-h 100.0 1.4E-39 4.9E-44 325.3 18.3 227 292-523 30-257 (321)
23 3v8s_A RHO-associated protein 100.0 1.9E-40 6.4E-45 341.3 9.9 210 293-510 61-277 (410)
24 2vd5_A DMPK protein; serine/th 100.0 2.5E-40 8.6E-45 340.6 10.8 213 292-510 52-274 (412)
25 3zgw_A Maternal embryonic leuc 100.0 8.8E-40 3E-44 329.4 14.1 202 300-508 9-212 (347)
26 3fxz_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 314.5 20.3 199 300-508 19-218 (297)
27 2c30_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 321.8 15.8 211 289-509 23-244 (321)
28 1o6l_A RAC-beta serine/threoni 100.0 1.1E-38 3.9E-43 320.3 17.0 201 300-508 4-207 (337)
29 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-38 9.1E-43 314.4 19.1 202 300-508 9-224 (310)
30 4eqm_A Protein kinase; transfe 100.0 1.3E-38 4.6E-43 314.2 16.3 203 300-509 10-215 (294)
31 4dc2_A Protein kinase C IOTA t 100.0 1.3E-38 4.6E-43 325.8 16.8 201 300-508 51-255 (396)
32 4fr4_A YANK1, serine/threonine 100.0 1.3E-38 4.5E-43 324.8 16.4 200 301-509 15-220 (384)
33 3fe3_A MAP/microtubule affinit 100.0 1.1E-38 3.9E-43 319.3 15.7 201 300-509 14-217 (328)
34 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.9E-39 1.7E-43 325.1 12.3 203 299-509 21-227 (353)
35 2psq_A Fibroblast growth facto 100.0 1.9E-38 6.6E-43 323.3 16.8 206 300-508 80-308 (370)
36 3tki_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 317.4 16.2 203 300-509 6-211 (323)
37 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-38 4.8E-43 324.0 15.4 203 299-508 63-287 (365)
38 2nru_A Interleukin-1 receptor- 100.0 1.6E-37 5.4E-42 308.3 22.2 218 287-510 11-238 (307)
39 1fot_A TPK1 delta, CAMP-depend 100.0 1.9E-38 6.5E-43 316.3 15.5 198 300-508 5-205 (318)
40 1xjd_A Protein kinase C, theta 100.0 2.5E-38 8.4E-43 318.7 15.7 205 297-509 13-221 (345)
41 2yab_A Death-associated protei 100.0 7.1E-38 2.4E-42 317.4 19.0 200 300-508 11-220 (361)
42 3niz_A Rhodanese family protei 100.0 4.3E-38 1.5E-42 313.1 16.5 202 300-509 20-223 (311)
43 4euu_A Serine/threonine-protei 100.0 7E-38 2.4E-42 312.7 17.6 202 301-508 9-225 (319)
44 3c4z_A Rhodopsin kinase; Ser/T 100.0 4.5E-38 1.5E-42 333.2 16.8 206 300-509 184-392 (543)
45 1rdq_E PKA C-alpha, CAMP-depen 100.0 3E-38 1E-42 319.0 14.7 198 301-509 41-241 (350)
46 3p86_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 314.0 14.0 204 299-508 35-241 (309)
47 3c0i_A Peripheral plasma membr 100.0 4.1E-38 1.4E-42 318.6 15.2 204 301-508 24-235 (351)
48 3kul_A Ephrin type-A receptor 100.0 4.3E-38 1.5E-42 315.0 15.1 202 301-508 49-257 (325)
49 3a8x_A Protein kinase C IOTA t 100.0 7.3E-38 2.5E-42 315.7 16.7 200 301-508 9-212 (345)
50 4hcu_A Tyrosine-protein kinase 100.0 3.3E-38 1.1E-42 307.1 13.6 201 300-508 9-210 (269)
51 2i0e_A Protein kinase C-beta I 100.0 3.5E-38 1.2E-42 318.7 14.1 203 299-509 18-224 (353)
52 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.6E-38 2.3E-42 304.7 15.4 201 300-508 7-208 (268)
53 2pmi_A Negative RE, cyclin-dep 100.0 1.1E-37 3.7E-42 311.1 17.2 205 300-509 4-212 (317)
54 2qol_A Ephrin receptor; recept 100.0 3.8E-38 1.3E-42 321.3 14.2 203 300-508 44-253 (373)
55 3a62_A Ribosomal protein S6 ki 100.0 3.7E-38 1.3E-42 315.8 13.4 202 300-509 16-224 (327)
56 2acx_A G protein-coupled recep 100.0 7.3E-38 2.5E-42 332.4 16.2 203 300-509 183-388 (576)
57 1tki_A Titin; serine kinase, m 100.0 1.4E-37 4.9E-42 310.6 17.2 199 300-508 4-205 (321)
58 3qd2_B Eukaryotic translation 100.0 1.4E-37 4.8E-42 311.9 17.1 204 300-507 5-277 (332)
59 3vhe_A Vascular endothelial gr 100.0 4.1E-38 1.4E-42 319.6 12.3 216 290-508 11-298 (359)
60 3cbl_A C-FES, proto-oncogene t 100.0 2.9E-38 9.8E-43 323.0 11.1 203 300-508 113-318 (377)
61 2y0a_A Death-associated protei 100.0 2.9E-37 9.7E-42 309.2 17.9 199 301-508 11-219 (326)
62 2bdw_A Hypothetical protein K1 100.0 2.2E-37 7.5E-42 314.4 17.1 200 300-508 28-232 (362)
63 2r5t_A Serine/threonine-protei 100.0 5.9E-38 2E-42 319.2 12.8 202 300-509 37-242 (373)
64 2zv2_A Calcium/calmodulin-depe 100.0 3.9E-37 1.3E-41 304.2 18.0 200 300-508 12-242 (298)
65 1ob3_A PFPK5, cell division co 100.0 1.4E-37 4.8E-42 305.9 14.5 201 301-509 2-204 (288)
66 1luf_A Muscle-specific tyrosin 100.0 9.4E-38 3.2E-42 314.9 13.4 208 298-508 44-279 (343)
67 3h4j_B AMPK kdaid, SNF1-like p 100.0 2E-37 6.7E-42 311.0 15.0 199 300-508 8-210 (336)
68 3soa_A Calcium/calmodulin-depe 100.0 3.4E-37 1.2E-41 320.6 17.2 202 299-508 9-215 (444)
69 3gen_A Tyrosine-protein kinase 100.0 1.2E-37 4.1E-42 305.5 13.0 202 299-508 22-224 (283)
70 2ivs_A Proto-oncogene tyrosine 100.0 9.9E-38 3.4E-42 310.6 12.5 207 300-509 22-256 (314)
71 1kob_A Twitchin; kinase, intra 100.0 7.5E-37 2.5E-41 312.7 19.2 200 300-508 50-252 (387)
72 3l9p_A Anaplastic lymphoma kin 100.0 7.7E-38 2.6E-42 318.5 11.8 206 300-508 70-289 (367)
73 1mp8_A Focal adhesion kinase 1 100.0 1.8E-37 6.2E-42 304.0 13.6 203 300-509 14-221 (281)
74 2izr_A Casein kinase I isoform 100.0 3.9E-37 1.3E-41 308.8 16.3 199 301-509 9-220 (330)
75 3tt0_A Basic fibroblast growth 100.0 3.3E-37 1.1E-41 315.8 15.9 206 300-508 68-296 (382)
76 3soc_A Activin receptor type-2 100.0 9.8E-38 3.3E-42 312.1 11.7 201 300-508 23-240 (322)
77 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-36 3.8E-41 304.8 19.2 193 306-510 16-213 (325)
78 1qcf_A Haematopoetic cell kina 100.0 5.1E-38 1.7E-42 329.0 9.7 204 297-508 184-388 (454)
79 3ork_A Serine/threonine protei 100.0 8.6E-38 2.9E-42 311.0 10.9 203 300-509 11-222 (311)
80 1rjb_A FL cytokine receptor; k 100.0 1.6E-37 5.3E-42 313.5 12.9 210 297-509 41-278 (344)
81 4ejn_A RAC-alpha serine/threon 100.0 1.1E-37 3.9E-42 325.8 12.2 201 300-508 147-351 (446)
82 1opk_A P150, C-ABL, proto-onco 100.0 2.3E-37 7.8E-42 327.2 14.6 204 299-509 218-423 (495)
83 3o0g_A Cell division protein k 100.0 7.6E-37 2.6E-41 301.2 17.4 199 301-507 2-203 (292)
84 3poz_A Epidermal growth factor 100.0 2.3E-37 7.8E-42 310.1 13.7 201 301-508 15-222 (327)
85 1vzo_A Ribosomal protein S6 ki 100.0 6.9E-38 2.3E-42 317.5 9.6 203 300-509 53-265 (355)
86 3is5_A Calcium-dependent prote 100.0 3.9E-37 1.3E-41 302.3 14.4 202 301-508 22-227 (285)
87 1nxk_A MAP kinase-activated pr 100.0 8.7E-37 3E-41 314.1 17.4 198 301-511 61-268 (400)
88 3oz6_A Mitogen-activated prote 100.0 1.1E-36 3.9E-41 312.5 18.0 202 299-509 7-234 (388)
89 2w4o_A Calcium/calmodulin-depe 100.0 5.5E-37 1.9E-41 310.1 15.1 197 300-508 52-252 (349)
90 3lb7_A RAF proto-oncogene seri 100.0 1.1E-36 3.8E-41 302.3 16.7 200 300-508 35-239 (307)
91 2x4f_A Myosin light chain kina 100.0 6.6E-37 2.3E-41 312.0 15.4 195 306-509 94-291 (373)
92 3p1a_A MYT1 kinase, membrane-a 100.0 1.6E-36 5.5E-41 301.7 17.8 197 301-507 57-256 (311)
93 3hko_A Calcium/calmodulin-depe 100.0 4.7E-37 1.6E-41 310.1 14.1 209 297-508 22-278 (345)
94 3q4u_A Activin receptor type-1 100.0 7.8E-37 2.7E-41 302.2 15.3 196 300-508 7-235 (301)
95 2y94_A 5'-AMP-activated protei 100.0 7E-37 2.4E-41 320.4 15.7 199 301-508 16-218 (476)
96 3t9t_A Tyrosine-protein kinase 100.0 4.5E-37 1.5E-41 298.5 12.6 201 300-508 7-208 (267)
97 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.9E-37 1.3E-41 322.0 12.9 202 299-508 182-384 (452)
98 2yex_A Serine/threonine-protei 100.0 2.3E-36 7.7E-41 295.1 17.2 203 300-509 6-211 (276)
99 1t46_A HOMO sapiens V-KIT hard 100.0 8.1E-37 2.8E-41 303.9 14.3 206 300-508 22-250 (313)
100 3gni_B Strad alpha; kinase fol 100.0 2.2E-36 7.6E-41 310.4 17.9 204 300-508 24-239 (389)
101 3cok_A Serine/threonine-protei 100.0 1.3E-36 4.6E-41 297.2 15.5 203 300-509 10-215 (278)
102 3uc3_A Serine/threonine-protei 100.0 1.8E-36 6.3E-41 307.6 16.9 199 300-509 19-221 (361)
103 2a2a_A Death-associated protei 100.0 2.2E-36 7.5E-41 302.2 17.2 200 300-508 11-220 (321)
104 2pvf_A Fibroblast growth facto 100.0 1.4E-36 4.9E-41 305.2 15.9 206 300-508 34-262 (334)
105 3kfa_A Tyrosine-protein kinase 100.0 3.7E-37 1.3E-41 302.6 11.3 203 299-508 11-215 (288)
106 3ugc_A Tyrosine-protein kinase 100.0 3.9E-37 1.3E-41 303.7 11.5 202 300-508 9-219 (295)
107 3mtl_A Cell division protein k 100.0 2.9E-37 1E-41 308.9 10.6 202 301-510 2-205 (324)
108 2qr7_A Ribosomal protein S6 ki 100.0 2.6E-37 8.8E-42 311.3 10.1 196 300-508 21-222 (342)
109 1k9a_A Carboxyl-terminal SRC k 100.0 1.7E-36 5.7E-41 317.0 16.6 196 300-508 192-389 (450)
110 3kex_A Receptor tyrosine-prote 100.0 4.4E-37 1.5E-41 307.8 11.7 201 301-508 13-220 (325)
111 2h34_A Serine/threonine-protei 100.0 2.2E-36 7.6E-41 300.5 16.7 203 300-509 33-238 (309)
112 3pfq_A PKC-B, PKC-beta, protei 100.0 7.2E-37 2.5E-41 334.1 14.2 203 299-509 339-545 (674)
113 2i1m_A Macrophage colony-stimu 100.0 3.3E-37 1.1E-41 309.7 10.3 210 296-508 41-269 (333)
114 1qpc_A LCK kinase; alpha beta 100.0 5E-37 1.7E-41 300.4 11.1 202 299-508 11-213 (279)
115 3llt_A Serine/threonine kinase 100.0 1.4E-36 4.7E-41 308.6 14.8 209 289-509 23-262 (360)
116 3cc6_A Protein tyrosine kinase 100.0 1.3E-36 4.4E-41 297.8 14.0 202 300-508 11-217 (281)
117 4agu_A Cyclin-dependent kinase 100.0 2.3E-36 7.9E-41 300.4 16.0 202 301-510 3-207 (311)
118 4e5w_A Tyrosine-protein kinase 100.0 1.3E-36 4.5E-41 300.9 14.1 201 301-507 21-230 (302)
119 3f3z_A Calcium/calmodulin-depe 100.0 3.9E-36 1.3E-40 293.7 16.9 198 300-508 8-209 (277)
120 4eut_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 312.7 14.3 202 301-508 9-225 (396)
121 3dls_A PAS domain-containing s 100.0 1.2E-36 4E-41 305.9 13.6 201 299-508 22-232 (335)
122 3g33_A Cell division protein k 100.0 4E-36 1.4E-40 298.4 17.2 203 299-509 7-222 (308)
123 2xir_A Vascular endothelial gr 100.0 9.8E-37 3.3E-41 303.7 12.8 215 291-508 17-253 (316)
124 1csn_A Casein kinase-1; phosph 100.0 5.3E-36 1.8E-40 295.8 17.9 200 300-509 9-221 (298)
125 3qup_A Tyrosine-protein kinase 100.0 1.7E-36 5.7E-41 303.2 14.3 208 298-508 20-242 (323)
126 2eue_A Carbon catabolite derep 100.0 3.8E-36 1.3E-40 293.6 16.5 198 301-508 13-214 (275)
127 3pg1_A Mitogen-activated prote 100.0 1.6E-36 5.6E-41 308.3 14.4 210 291-509 12-237 (362)
128 1p4o_A Insulin-like growth fac 100.0 7.4E-37 2.5E-41 305.6 11.5 214 292-508 16-243 (322)
129 3kk8_A Calcium/calmodulin depe 100.0 4.8E-36 1.6E-40 294.1 16.6 200 300-508 5-209 (284)
130 3a7i_A MST3 kinase, serine/thr 100.0 8E-36 2.7E-40 295.5 18.3 200 300-508 21-221 (303)
131 1u5q_A Serine/threonine protei 100.0 2.8E-36 9.4E-41 304.6 15.1 196 301-508 54-255 (348)
132 3fdn_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 295.9 13.8 199 300-508 8-209 (279)
133 4f0f_A Serine/threonine-protei 100.0 8.2E-36 2.8E-40 293.0 17.9 197 300-508 18-230 (287)
134 2rku_A Serine/threonine-protei 100.0 3.6E-36 1.2E-40 296.6 15.4 201 300-508 14-217 (294)
135 3op5_A Serine/threonine-protei 100.0 8.9E-37 3.1E-41 310.5 11.4 202 300-508 34-263 (364)
136 3bhy_A Death-associated protei 100.0 5.8E-36 2E-40 293.3 16.5 199 301-508 5-213 (283)
137 2owb_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 302.5 15.2 201 300-508 40-243 (335)
138 3mi9_A Cell division protein k 100.0 2.5E-36 8.6E-41 305.6 14.2 203 300-509 16-232 (351)
139 4hgt_A Casein kinase I isoform 100.0 9.2E-36 3.1E-40 293.7 17.8 205 299-513 7-222 (296)
140 3dbq_A Dual specificity protei 100.0 1.9E-36 6.5E-41 305.5 13.2 200 300-508 8-222 (343)
141 1u59_A Tyrosine-protein kinase 100.0 3.3E-36 1.1E-40 295.9 14.5 201 301-508 9-216 (287)
142 3ttj_A Mitogen-activated prote 100.0 2.8E-36 9.6E-41 316.0 14.8 199 300-510 61-267 (464)
143 3i6u_A CDS1, serine/threonine- 100.0 4.8E-36 1.6E-40 310.6 16.4 200 299-508 133-346 (419)
144 2ozo_A Tyrosine-protein kinase 100.0 2.5E-36 8.4E-41 326.9 14.8 195 308-509 343-543 (613)
145 1mqb_A Ephrin type-A receptor 100.0 3.9E-36 1.3E-40 301.9 15.2 202 301-508 44-253 (333)
146 3lxp_A Non-receptor tyrosine-p 100.0 5.1E-36 1.7E-40 299.1 15.8 198 303-508 33-239 (318)
147 3eqc_A Dual specificity mitoge 100.0 1.9E-36 6.5E-41 307.6 12.8 201 300-509 32-233 (360)
148 2w5a_A Serine/threonine-protei 100.0 1.3E-36 4.5E-41 297.3 11.2 206 300-509 5-219 (279)
149 3lzb_A Epidermal growth factor 100.0 3.8E-36 1.3E-40 301.2 14.8 202 300-508 14-222 (327)
150 3kmu_A ILK, integrin-linked ki 100.0 3.6E-36 1.2E-40 292.6 14.0 197 300-508 9-213 (271)
151 3c1x_A Hepatocyte growth facto 100.0 2.2E-36 7.6E-41 308.0 13.1 201 302-508 90-299 (373)
152 3dtc_A Mitogen-activated prote 100.0 3.7E-36 1.3E-40 292.8 14.0 200 300-508 6-216 (271)
153 3qyz_A Mitogen-activated prote 100.0 3.9E-36 1.3E-40 305.8 14.8 202 300-510 26-236 (364)
154 2eva_A TAK1 kinase - TAB1 chim 100.0 3.1E-36 1.1E-40 299.1 13.5 197 301-508 8-205 (307)
155 2ac3_A MAP kinase-interacting 100.0 6.6E-36 2.2E-40 297.9 15.9 201 301-509 12-229 (316)
156 3uzp_A CKI-delta, CKID, casein 100.0 1.5E-35 5.3E-40 292.2 18.3 202 300-511 8-220 (296)
157 2zmd_A Dual specificity protei 100.0 4.1E-36 1.4E-40 308.2 14.4 199 301-508 56-269 (390)
158 4fvq_A Tyrosine-protein kinase 100.0 7.8E-37 2.7E-41 300.5 8.7 196 300-507 7-219 (289)
159 3eb0_A Putative uncharacterize 100.0 4.6E-36 1.6E-40 307.4 14.6 202 297-509 3-245 (383)
160 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-36 4E-41 324.7 10.4 202 299-508 265-467 (535)
161 1x8b_A WEE1HU, WEE1-like prote 100.0 6.4E-36 2.2E-40 293.4 14.8 200 300-507 10-232 (289)
162 2pml_X PFPK7, Ser/Thr protein 100.0 8.6E-36 2.9E-40 301.2 16.0 201 300-509 30-255 (348)
163 2wqm_A Serine/threonine-protei 100.0 6.6E-36 2.2E-40 297.1 14.9 205 300-508 31-238 (310)
164 2vgo_A Serine/threonine-protei 100.0 6.8E-36 2.3E-40 293.2 14.8 199 300-508 13-214 (284)
165 2y7j_A Phosphorylase B kinase 100.0 1.7E-35 6E-40 300.9 18.1 206 294-508 87-307 (365)
166 1fvr_A Tyrosine-protein kinase 100.0 4.5E-36 1.5E-40 300.7 13.6 203 301-508 25-244 (327)
167 3byv_A Rhoptry kinase; malaria 100.0 9.3E-37 3.2E-41 311.8 8.5 200 300-508 72-315 (377)
168 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.1E-36 1.4E-40 301.2 13.0 202 299-509 32-241 (329)
169 1cm8_A Phosphorylated MAP kina 100.0 8.3E-36 2.8E-40 303.4 15.4 197 300-509 24-229 (367)
170 3rp9_A Mitogen-activated prote 100.0 8.8E-36 3E-40 312.6 15.9 195 300-502 52-280 (458)
171 4aaa_A Cyclin-dependent kinase 100.0 8.3E-36 2.8E-40 299.3 15.0 201 301-509 25-228 (331)
172 1ua2_A CAK, cell division prot 100.0 7.6E-36 2.6E-40 301.5 14.6 203 299-509 8-216 (346)
173 3og7_A AKAP9-BRAF fusion prote 100.0 6.8E-36 2.3E-40 294.0 13.6 200 300-508 23-227 (289)
174 3com_A Serine/threonine-protei 100.0 2.4E-35 8.1E-40 293.6 17.7 200 299-508 27-227 (314)
175 2vwi_A Serine/threonine-protei 100.0 2.2E-36 7.4E-41 299.3 10.0 208 298-508 12-229 (303)
176 3n9x_A Phosphotransferase; mal 100.0 1.1E-35 3.9E-40 309.1 15.8 200 300-507 25-253 (432)
177 3pls_A Macrophage-stimulating 100.0 1.6E-35 5.6E-40 292.3 15.9 200 302-507 22-229 (298)
178 3lm5_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40 296.5 16.2 207 295-508 22-235 (327)
179 2buj_A Serine/threonine-protei 100.0 7E-36 2.4E-40 297.8 13.3 205 300-508 28-248 (317)
180 3nyv_A Calmodulin-domain prote 100.0 8.9E-36 3E-40 314.8 14.8 200 300-509 25-230 (484)
181 3f66_A Hepatocyte growth facto 100.0 1.3E-35 4.4E-40 293.2 15.0 201 301-507 25-234 (298)
182 3q5i_A Protein kinase; CDPK, m 100.0 2.2E-35 7.5E-40 313.2 17.5 200 300-509 35-250 (504)
183 3an0_A Dual specificity mitoge 100.0 7.9E-36 2.7E-40 300.6 13.3 204 300-508 50-259 (340)
184 3fme_A Dual specificity mitoge 100.0 7.9E-36 2.7E-40 293.4 13.0 204 300-508 6-215 (290)
185 2yfx_A Tyrosine-protein kinase 100.0 8.9E-36 3E-40 298.5 13.4 206 300-508 29-248 (327)
186 2jam_A Calcium/calmodulin-depe 100.0 1.4E-35 5E-40 293.8 14.7 198 300-508 8-209 (304)
187 3lxl_A Tyrosine-protein kinase 100.0 9.8E-36 3.4E-40 298.2 13.6 201 301-508 23-232 (327)
188 2h6d_A 5'-AMP-activated protei 100.0 1.8E-35 6.1E-40 288.8 14.9 200 300-508 10-213 (276)
189 2clq_A Mitogen-activated prote 100.0 4.6E-35 1.6E-39 288.7 17.7 201 302-508 23-227 (295)
190 1xbb_A Tyrosine-protein kinase 100.0 5.9E-36 2E-40 294.7 11.3 201 300-508 15-223 (291)
191 3mwu_A Calmodulin-domain prote 100.0 1.7E-35 6E-40 312.6 15.6 199 300-508 21-224 (486)
192 3brb_A Proto-oncogene tyrosine 100.0 2.1E-35 7.1E-40 293.9 15.3 210 297-509 30-253 (313)
193 1j1b_A Glycogen synthase kinas 100.0 1E-35 3.5E-40 308.3 13.5 198 301-509 54-260 (420)
194 2v62_A Serine/threonine-protei 100.0 5.5E-36 1.9E-40 302.4 11.1 200 301-508 37-262 (345)
195 2r3i_A Cell division protein k 100.0 1.8E-35 6.3E-40 292.2 14.6 202 301-509 3-207 (299)
196 3nsz_A CK II alpha, casein kin 100.0 6E-35 2.1E-39 292.7 18.2 192 301-508 36-233 (330)
197 3lij_A Calcium/calmodulin depe 100.0 2.2E-35 7.4E-40 312.5 15.6 199 300-508 36-239 (494)
198 2fst_X Mitogen-activated prote 100.0 1.3E-35 4.4E-40 301.8 13.4 198 300-510 28-234 (367)
199 3mdy_A Bone morphogenetic prot 100.0 7.6E-35 2.6E-39 292.7 18.5 199 294-502 30-248 (337)
200 2x7f_A TRAF2 and NCK-interacti 100.0 8.5E-36 2.9E-40 298.4 11.4 210 291-508 14-236 (326)
201 2xrw_A Mitogen-activated prote 100.0 3.2E-35 1.1E-39 299.7 15.8 198 300-509 24-229 (371)
202 2j7t_A Serine/threonine-protei 100.0 1.5E-35 5.3E-40 293.2 13.0 201 300-508 18-224 (302)
203 2a19_B Interferon-induced, dou 100.0 1.9E-35 6.6E-40 289.6 13.4 196 300-507 10-222 (284)
204 1t4h_A Serine/threonine-protei 100.0 6.4E-35 2.2E-39 287.1 17.1 196 302-508 27-231 (290)
205 3gxj_A TGF-beta receptor type- 100.0 8.4E-37 2.9E-41 302.2 3.6 189 301-502 3-214 (303)
206 1b6c_B TGF-B superfamily recep 100.0 5.9E-35 2E-39 294.3 16.9 205 291-508 32-269 (342)
207 3e3p_A Protein kinase, putativ 100.0 2.5E-35 8.6E-40 299.2 14.2 209 294-510 16-236 (360)
208 2ycf_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 293.5 14.8 200 300-509 9-222 (322)
209 2b9h_A MAP kinase FUS3, mitoge 100.0 4.1E-35 1.4E-39 296.8 15.4 201 300-509 10-226 (353)
210 3q60_A ROP5B; pseudokinase, tr 100.0 9.6E-36 3.3E-40 303.7 10.6 199 300-509 61-296 (371)
211 4e7w_A Glycogen synthase kinas 100.0 2.1E-35 7.2E-40 303.4 13.3 199 301-510 40-246 (394)
212 3g2f_A Bone morphogenetic prot 100.0 1.9E-35 6.6E-40 297.1 12.6 200 300-509 12-238 (336)
213 3kvw_A DYRK2, dual specificity 100.0 4.6E-35 1.6E-39 304.1 15.8 199 300-510 96-303 (429)
214 2w1i_A JAK2; chromosomal rearr 100.0 3E-35 1E-39 294.6 13.6 202 300-508 40-250 (326)
215 4fl3_A Tyrosine-protein kinase 100.0 2.4E-35 8.1E-40 320.0 13.7 194 307-508 375-575 (635)
216 2jii_A Serine/threonine-protei 100.0 9.6E-36 3.3E-40 301.5 9.9 197 301-509 42-271 (352)
217 2j0j_A Focal adhesion kinase 1 100.0 3.1E-35 1.1E-39 320.2 14.3 203 299-508 388-595 (656)
218 3ll6_A Cyclin G-associated kin 100.0 3.2E-35 1.1E-39 295.3 13.0 203 300-508 27-255 (337)
219 1phk_A Phosphorylase kinase; g 100.0 1.1E-34 3.6E-39 286.6 16.5 200 300-508 16-231 (298)
220 4exu_A Mitogen-activated prote 100.0 4.7E-35 1.6E-39 298.5 14.2 196 300-509 41-245 (371)
221 1byg_A CSK, protein (C-termina 100.0 2.2E-35 7.7E-40 288.5 11.2 197 300-509 20-218 (278)
222 3sv0_A Casein kinase I-like; t 100.0 1.7E-34 5.7E-39 302.9 18.5 201 300-510 6-217 (483)
223 2wtk_C Serine/threonine-protei 100.0 2.1E-34 7.1E-39 285.4 18.2 203 300-508 4-215 (305)
224 3rgf_A Cyclin-dependent kinase 100.0 4.4E-35 1.5E-39 302.4 12.7 200 303-509 22-239 (405)
225 2i6l_A Mitogen-activated prote 100.0 1.1E-34 3.9E-39 289.0 14.6 200 301-510 11-229 (320)
226 1blx_A Cyclin-dependent kinase 100.0 8.5E-35 2.9E-39 291.1 13.6 203 299-509 9-222 (326)
227 1u46_A ACK-1, activated CDC42 100.0 5.6E-35 1.9E-39 287.5 11.3 202 300-508 17-227 (291)
228 1wak_A Serine/threonine-protei 100.0 1.9E-34 6.5E-39 296.5 15.7 200 300-510 36-297 (397)
229 1z57_A Dual specificity protei 100.0 1.7E-34 5.7E-39 290.2 14.7 199 300-510 13-238 (339)
230 3coi_A Mitogen-activated prote 100.0 2.9E-34 1E-38 290.6 16.1 196 300-509 23-227 (353)
231 3aln_A Dual specificity mitoge 100.0 1.7E-34 6E-39 289.1 13.8 204 300-508 21-231 (327)
232 2wei_A Calmodulin-domain prote 100.0 3.3E-34 1.1E-38 281.6 15.3 201 298-508 19-224 (287)
233 3fhr_A MAP kinase-activated pr 100.0 2.6E-34 8.8E-39 289.0 13.7 197 300-509 27-232 (336)
234 2y4i_B KSR2, HKSR2, kinase sup 100.0 6.5E-35 2.2E-39 291.0 8.9 204 296-508 28-245 (319)
235 2pzi_A Probable serine/threoni 100.0 1.9E-34 6.6E-39 316.7 13.3 192 301-508 80-278 (681)
236 1zy4_A Serine/threonine-protei 100.0 4E-34 1.4E-38 282.7 13.9 194 300-501 5-226 (303)
237 3cek_A Dual specificity protei 100.0 3.6E-34 1.2E-38 285.0 13.6 201 299-508 26-241 (313)
238 2vx3_A Dual specificity tyrosi 100.0 5.6E-34 1.9E-38 291.7 15.3 201 299-509 52-261 (382)
239 2rio_A Serine/threonine-protei 100.0 2.8E-34 9.7E-39 298.7 13.3 199 302-508 16-242 (434)
240 2iwi_A Serine/threonine-protei 100.0 1.2E-34 4.1E-39 288.2 9.7 202 297-508 27-241 (312)
241 3a99_A Proto-oncogene serine/t 100.0 1E-34 3.5E-39 290.0 8.9 201 298-508 40-251 (320)
242 3qa8_A MGC80376 protein; kinas 100.0 2.9E-34 1E-38 307.8 12.0 203 300-508 13-225 (676)
243 2eu9_A Dual specificity protei 100.0 1.1E-33 3.6E-38 286.3 14.9 198 300-509 18-242 (355)
244 2vuw_A Serine/threonine-protei 100.0 7.6E-35 2.6E-39 292.9 6.2 192 300-507 19-278 (336)
245 1q8y_A SR protein kinase; tran 100.0 1.3E-33 4.6E-38 287.8 14.0 200 300-510 18-239 (373)
246 2dyl_A Dual specificity mitoge 100.0 1.7E-33 5.8E-38 280.5 13.9 200 300-508 24-231 (318)
247 3p23_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 293.7 12.9 197 300-507 23-231 (432)
248 3uqc_A Probable conserved tran 100.0 2.2E-32 7.4E-37 268.4 14.4 173 301-510 31-206 (286)
249 3dzo_A Rhoptry kinase domain; 100.0 5.1E-33 1.7E-37 287.3 8.4 200 301-509 78-320 (413)
250 3m2w_A MAP kinase-activated pr 100.0 2.7E-31 9.4E-36 262.4 15.4 174 301-508 17-200 (299)
251 4azs_A Methyltransferase WBDD; 100.0 2E-30 6.7E-35 277.4 5.2 186 309-506 242-438 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 9.8E-28 3.3E-32 255.2 9.4 186 304-507 339-539 (540)
253 1ogq_A PGIP-2, polygalacturona 99.9 4E-27 1.4E-31 234.0 11.6 171 29-201 2-186 (313)
254 1zar_A RIO2 kinase; serine kin 99.9 5.3E-24 1.8E-28 207.8 10.3 166 293-491 82-274 (282)
255 3rgz_A Protein brassinosteroid 99.9 3.9E-24 1.3E-28 238.1 10.5 153 27-183 6-164 (768)
256 4ecn_A Leucine-rich repeat pro 99.9 8E-24 2.7E-28 235.3 8.4 171 28-203 264-562 (876)
257 4eco_A Uncharacterized protein 99.9 2.1E-23 7.4E-28 227.1 10.0 172 30-203 27-319 (636)
258 3e6j_A Variable lymphocyte rec 99.9 1.8E-21 6.2E-26 184.1 13.0 148 58-206 14-176 (229)
259 4fcg_A Uncharacterized protein 99.8 5.1E-22 1.7E-26 198.4 6.3 175 25-203 19-220 (328)
260 2v9t_B SLIT homolog 2 protein 99.8 1E-20 3.5E-25 177.7 11.4 147 60-206 8-169 (220)
261 2v70_A SLIT-2, SLIT homolog 2 99.8 3.1E-20 1.1E-24 174.4 10.7 147 60-206 8-170 (220)
262 2o6s_A Variable lymphocyte rec 99.8 1E-19 3.5E-24 169.3 13.3 147 60-206 4-165 (208)
263 1zth_A RIO1 serine protein kin 99.8 1.1E-19 3.7E-24 175.0 10.3 138 303-456 49-220 (258)
264 1w8a_A SLIT protein; signaling 99.8 6.5E-19 2.2E-23 161.7 11.3 147 60-206 5-166 (192)
265 3rgz_A Protein brassinosteroid 99.8 7.1E-19 2.4E-23 195.7 9.5 135 77-212 611-749 (768)
266 3m19_A Variable lymphocyte rec 99.7 3.9E-18 1.3E-22 163.5 11.0 128 75-202 36-168 (251)
267 2o6r_A Variable lymphocyte rec 99.7 4.4E-18 1.5E-22 153.9 10.6 128 61-188 5-142 (177)
268 3oja_A Leucine-rich immune mol 99.7 8.4E-20 2.9E-24 192.2 -1.7 138 64-204 110-252 (487)
269 3m19_A Variable lymphocyte rec 99.7 1.2E-17 4.1E-22 160.0 12.6 131 74-204 59-194 (251)
270 1w8a_A SLIT protein; signaling 99.7 1E-17 3.5E-22 153.7 9.9 127 77-206 11-143 (192)
271 1ogq_A PGIP-2, polygalacturona 99.7 3.4E-18 1.2E-22 169.5 6.5 132 75-208 175-310 (313)
272 3rfs_A Internalin B, repeat mo 99.7 3.5E-17 1.2E-21 158.8 12.5 133 74-206 85-222 (272)
273 2o6q_A Variable lymphocyte rec 99.7 3.5E-17 1.2E-21 158.6 12.1 128 75-202 38-170 (270)
274 2xot_A Amphoterin-induced prot 99.7 1.1E-17 3.7E-22 169.3 8.8 127 61-187 16-153 (361)
275 2wfh_A SLIT homolog 2 protein 99.7 3E-17 1E-21 150.6 10.9 124 79-206 15-143 (193)
276 2wfh_A SLIT homolog 2 protein 99.7 2.6E-17 9E-22 151.0 10.3 125 60-185 7-141 (193)
277 4gyi_A RIO2 kinase; protein ki 99.7 8.3E-18 2.8E-22 168.4 7.0 148 295-457 89-267 (397)
278 1p9a_G Platelet glycoprotein I 99.7 4.9E-17 1.7E-21 159.2 12.0 131 74-205 77-211 (290)
279 2o6q_A Variable lymphocyte rec 99.7 9.2E-17 3.1E-21 155.6 12.6 110 75-184 62-171 (270)
280 4g8a_A TOLL-like receptor 4; l 99.7 4.8E-17 1.6E-21 176.8 11.1 131 74-204 52-188 (635)
281 2v70_A SLIT-2, SLIT homolog 2 99.7 1.2E-16 4.2E-21 149.8 9.5 114 74-187 57-170 (220)
282 3v47_A TOLL-like receptor 5B a 99.7 1.2E-16 4E-21 166.8 10.0 133 74-206 275-412 (455)
283 1ozn_A Reticulon 4 receptor; N 99.7 7.6E-17 2.6E-21 157.5 8.0 114 75-188 81-195 (285)
284 2z66_A Variable lymphocyte rec 99.6 1.5E-16 5E-21 157.1 8.4 110 75-184 102-213 (306)
285 2o6r_A Variable lymphocyte rec 99.6 4.7E-16 1.6E-20 140.5 10.6 128 76-206 9-141 (177)
286 2ell_A Acidic leucine-rich nuc 99.6 4.6E-16 1.6E-20 139.3 8.7 125 74-201 24-159 (168)
287 3g39_A Variable lymphocyte rec 99.6 7E-16 2.4E-20 138.4 9.9 110 77-189 12-121 (170)
288 2v9t_B SLIT homolog 2 protein 99.6 7.4E-16 2.5E-20 144.4 10.1 112 74-185 56-167 (220)
289 2z80_A TOLL-like receptor 2, v 99.6 3.3E-16 1.1E-20 157.8 8.0 140 60-202 27-187 (353)
290 2z62_A TOLL-like receptor 4, v 99.6 1E-15 3.5E-20 148.7 11.2 127 75-201 29-161 (276)
291 1ozn_A Reticulon 4 receptor; N 99.6 1.1E-15 3.8E-20 149.2 10.9 129 74-202 32-166 (285)
292 3v47_A TOLL-like receptor 5B a 99.6 6.1E-16 2.1E-20 161.4 9.3 143 61-203 6-168 (455)
293 3vq2_A TLR4, TOLL-like recepto 99.6 1.1E-15 3.7E-20 165.6 11.4 130 74-203 32-167 (606)
294 4g8a_A TOLL-like receptor 4; l 99.6 5.6E-16 1.9E-20 168.3 9.0 133 74-206 445-584 (635)
295 2o6s_A Variable lymphocyte rec 99.6 2E-15 6.9E-20 140.1 11.2 126 74-201 52-177 (208)
296 2r9u_A Variable lymphocyte rec 99.6 1.8E-15 6.2E-20 136.2 10.2 110 77-189 15-124 (174)
297 2je0_A Acidic leucine-rich nuc 99.6 6.1E-16 2.1E-20 135.5 6.8 112 74-187 17-130 (149)
298 3e6j_A Variable lymphocyte rec 99.6 1.9E-15 6.5E-20 142.6 10.4 114 74-188 64-177 (229)
299 4b8c_D Glucose-repressible alc 99.6 2.8E-16 9.6E-21 172.9 5.4 110 76-189 226-335 (727)
300 3zyi_A Leucine-rich repeat-con 99.6 1.1E-15 3.9E-20 159.4 9.7 130 74-203 75-210 (452)
301 2z81_A CD282 antigen, TOLL-lik 99.6 6.2E-16 2.1E-20 165.3 7.9 140 62-202 3-161 (549)
302 3rfs_A Internalin B, repeat mo 99.6 1.7E-15 5.7E-20 146.9 10.2 126 74-201 109-234 (272)
303 4fcg_A Uncharacterized protein 99.6 1.2E-15 4.2E-20 152.1 9.3 127 74-203 127-267 (328)
304 2z62_A TOLL-like receptor 4, v 99.6 1.4E-15 4.7E-20 147.8 9.3 114 74-187 52-166 (276)
305 3vq2_A TLR4, TOLL-like recepto 99.6 6.7E-16 2.3E-20 167.2 7.7 132 74-206 424-562 (606)
306 3j0a_A TOLL-like receptor 5; m 99.6 8.8E-16 3E-20 172.6 8.8 131 75-207 427-565 (844)
307 3zyj_A Leucine-rich repeat-con 99.6 1.4E-15 4.8E-20 158.1 9.5 138 65-202 45-198 (440)
308 2z66_A Variable lymphocyte rec 99.6 6.9E-16 2.4E-20 152.2 6.0 142 60-202 4-163 (306)
309 3zyj_A Leucine-rich repeat-con 99.6 2.6E-15 8.7E-20 156.1 10.3 130 75-206 137-296 (440)
310 2id5_A Lingo-1, leucine rich r 99.6 2.3E-15 7.8E-20 158.1 9.9 140 64-203 12-166 (477)
311 1p9a_G Platelet glycoprotein I 99.6 3.8E-15 1.3E-19 145.7 10.8 126 74-202 31-161 (290)
312 3t6q_A CD180 antigen; protein- 99.6 2.6E-15 8.9E-20 162.5 10.4 139 65-203 14-167 (606)
313 3oja_B Anopheles plasmodium-re 99.6 1.5E-15 5E-20 164.1 8.2 152 50-202 7-184 (597)
314 2ft3_A Biglycan; proteoglycan, 99.6 9.5E-15 3.3E-19 145.8 12.7 139 62-203 32-186 (332)
315 3zyi_A Leucine-rich repeat-con 99.6 4.9E-15 1.7E-19 154.5 10.2 131 74-206 147-307 (452)
316 2xwt_C Thyrotropin receptor; s 99.6 5.5E-15 1.9E-19 140.3 9.0 127 74-202 31-169 (239)
317 3t6q_A CD180 antigen; protein- 99.6 2.7E-15 9.3E-20 162.4 7.6 131 75-206 426-564 (606)
318 3o6n_A APL1; leucine-rich repe 99.6 3.4E-15 1.2E-19 152.5 7.4 129 74-202 45-178 (390)
319 2z63_A TOLL-like receptor 4, v 99.5 4.5E-15 1.5E-19 159.4 8.1 132 75-206 397-535 (570)
320 4eco_A Uncharacterized protein 99.5 1.9E-15 6.6E-20 164.3 4.4 128 74-202 206-366 (636)
321 1ziw_A TOLL-like receptor 3; i 99.5 1.3E-14 4.3E-19 159.4 10.7 129 74-202 25-158 (680)
322 1dce_A Protein (RAB geranylger 99.5 9.1E-15 3.1E-19 156.1 9.0 110 75-189 442-552 (567)
323 3j0a_A TOLL-like receptor 5; m 99.5 1E-14 3.5E-19 163.9 9.5 139 63-202 14-161 (844)
324 1xku_A Decorin; proteoglycan, 99.5 2.2E-14 7.4E-19 143.1 10.7 139 61-202 29-184 (330)
325 4ezg_A Putative uncharacterize 99.5 9E-15 3.1E-19 134.5 6.5 103 75-181 45-147 (197)
326 3g39_A Variable lymphocyte rec 99.5 2.9E-14 1E-18 127.8 9.6 105 99-206 10-119 (170)
327 2ifg_A High affinity nerve gro 99.5 2.6E-14 8.8E-19 143.6 9.9 132 62-207 7-146 (347)
328 4ezg_A Putative uncharacterize 99.5 1.1E-14 3.6E-19 134.0 6.5 123 74-201 66-193 (197)
329 3o53_A Protein LRIM1, AGAP0063 99.5 1.1E-14 3.6E-19 144.5 6.9 105 76-183 122-227 (317)
330 1ziw_A TOLL-like receptor 3; i 99.5 3E-14 1E-18 156.3 10.5 132 75-207 481-627 (680)
331 2xot_A Amphoterin-induced prot 99.5 2E-14 7E-19 145.2 8.4 132 74-206 64-206 (361)
332 2z7x_B TOLL-like receptor 1, v 99.5 1.8E-14 6.1E-19 153.0 8.1 108 74-183 324-434 (520)
333 3oja_B Anopheles plasmodium-re 99.5 4E-14 1.4E-18 152.9 10.8 128 74-201 75-204 (597)
334 2ell_A Acidic leucine-rich nuc 99.5 1.5E-14 5E-19 129.4 6.2 111 74-188 49-164 (168)
335 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 2.6E-14 8.9E-19 153.3 9.3 132 74-206 353-514 (562)
336 2id5_A Lingo-1, leucine rich r 99.5 1.5E-14 5.3E-19 151.8 7.2 131 76-206 202-337 (477)
337 2z63_A TOLL-like receptor 4, v 99.5 3.6E-14 1.2E-18 152.3 10.0 129 74-202 28-162 (570)
338 2r9u_A Variable lymphocyte rec 99.5 7.7E-14 2.6E-18 125.5 9.7 103 101-206 15-122 (174)
339 4ecn_A Leucine-rich repeat pro 99.5 1.3E-14 4.6E-19 161.3 5.7 127 74-202 448-608 (876)
340 3o6n_A APL1; leucine-rich repe 99.5 7.8E-14 2.7E-18 142.4 10.9 127 74-201 69-198 (390)
341 1xku_A Decorin; proteoglycan, 99.5 9.2E-14 3.1E-18 138.5 11.0 125 74-202 145-276 (330)
342 2z80_A TOLL-like receptor 2, v 99.5 3.5E-14 1.2E-18 143.0 6.9 127 74-201 76-210 (353)
343 1wwl_A Monocyte differentiatio 99.5 7E-15 2.4E-19 145.5 1.6 108 76-184 65-187 (312)
344 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 4.4E-14 1.5E-18 151.5 7.8 125 74-201 52-181 (562)
345 3cvr_A Invasion plasmid antige 99.5 4E-14 1.4E-18 150.5 7.0 134 52-203 33-174 (571)
346 2ft3_A Biglycan; proteoglycan, 99.5 8.5E-14 2.9E-18 138.9 8.6 106 74-183 147-254 (332)
347 1wwl_A Monocyte differentiatio 99.4 3.2E-14 1.1E-18 140.7 4.8 128 74-202 121-266 (312)
348 4glp_A Monocyte differentiatio 99.4 4.2E-14 1.4E-18 139.7 5.7 110 75-185 118-239 (310)
349 2xwt_C Thyrotropin receptor; s 99.4 6.9E-14 2.4E-18 132.7 6.9 126 74-202 55-193 (239)
350 1a9n_A U2A', U2A'; complex (nu 99.4 9.1E-14 3.1E-18 125.3 6.7 109 74-188 19-130 (176)
351 2z7x_B TOLL-like receptor 1, v 99.4 1E-13 3.5E-18 147.1 7.6 126 75-202 303-434 (520)
352 2z81_A CD282 antigen, TOLL-lik 99.4 9.1E-14 3.1E-18 148.5 6.9 117 74-190 50-168 (549)
353 2je0_A Acidic leucine-rich nuc 99.4 3.9E-14 1.3E-18 123.9 3.1 104 74-179 42-149 (149)
354 1xeu_A Internalin C; cellular 99.4 2.2E-13 7.5E-18 131.2 8.6 121 74-204 63-187 (263)
355 4b8c_D Glucose-repressible alc 99.4 1.6E-13 5.6E-18 150.9 8.5 169 30-203 129-330 (727)
356 1a9n_A U2A', U2A'; complex (nu 99.4 4.8E-14 1.6E-18 127.1 3.5 105 75-183 43-153 (176)
357 4glp_A Monocyte differentiatio 99.4 8.5E-14 2.9E-18 137.5 5.5 128 74-203 145-286 (310)
358 3oja_A Leucine-rich immune mol 99.4 9.2E-14 3.1E-18 146.1 5.5 126 75-202 59-204 (487)
359 1h6t_A Internalin B; cell adhe 99.4 5.3E-13 1.8E-17 130.5 9.3 120 74-202 68-191 (291)
360 2ifg_A High affinity nerve gro 99.4 4E-13 1.4E-17 134.8 8.1 104 101-206 11-120 (347)
361 1h6t_A Internalin B; cell adhe 99.4 4.9E-13 1.7E-17 130.8 8.0 122 74-204 90-215 (291)
362 1xeu_A Internalin C; cellular 99.4 7.5E-13 2.6E-17 127.4 9.0 121 74-204 41-165 (263)
363 1h6u_A Internalin H; cell adhe 99.4 4.3E-13 1.5E-17 132.3 7.0 122 74-204 85-210 (308)
364 1ds9_A Outer arm dynein; leuci 99.4 2.3E-15 8E-20 138.6 -9.6 125 75-204 19-155 (198)
365 1h6u_A Internalin H; cell adhe 99.4 1.2E-12 4.1E-17 129.1 9.1 120 74-202 63-186 (308)
366 4fmz_A Internalin; leucine ric 99.3 1E-12 3.6E-17 131.7 7.8 121 75-203 200-325 (347)
367 4ay9_X Follicle-stimulating ho 99.3 1.3E-12 4.4E-17 131.3 8.3 140 62-201 8-166 (350)
368 1m9s_A Internalin B; cell inva 99.3 2.1E-12 7.2E-17 138.7 9.7 120 74-202 65-188 (605)
369 1m9s_A Internalin B; cell inva 99.3 1.9E-12 6.7E-17 139.0 9.1 122 74-204 87-212 (605)
370 3o53_A Protein LRIM1, AGAP0063 99.3 2.2E-12 7.6E-17 127.8 7.5 112 74-189 144-257 (317)
371 3g06_A SSPH2 (leucine-rich rep 99.3 1E-12 3.6E-17 141.3 5.0 136 50-202 10-154 (622)
372 3tm0_A Aminoglycoside 3'-phosp 99.3 1.2E-11 3.9E-16 119.0 11.3 147 296-453 9-212 (263)
373 1o6v_A Internalin A; bacterial 99.3 3.9E-12 1.3E-16 133.0 8.1 102 75-184 244-345 (466)
374 1ds9_A Outer arm dynein; leuci 99.3 2.3E-14 7.8E-19 131.9 -8.5 109 74-188 48-158 (198)
375 1dce_A Protein (RAB geranylger 99.3 4.5E-12 1.5E-16 135.3 7.8 102 99-205 442-549 (567)
376 3cvr_A Invasion plasmid antige 99.2 5.6E-12 1.9E-16 134.0 7.3 112 75-203 121-244 (571)
377 3bz5_A Internalin-J, INLJ; leu 99.2 2.8E-11 9.4E-16 126.0 11.0 99 75-184 43-141 (457)
378 1o6v_A Internalin A; bacterial 99.2 1.4E-11 4.9E-16 128.7 8.7 123 74-204 221-346 (466)
379 4fmz_A Internalin; leucine ric 99.2 9.6E-12 3.3E-16 124.6 6.9 121 74-201 221-345 (347)
380 3bz5_A Internalin-J, INLJ; leu 99.2 4.1E-11 1.4E-15 124.7 10.0 104 74-188 148-251 (457)
381 1nd4_A Aminoglycoside 3'-phosp 99.2 3.5E-11 1.2E-15 115.3 8.6 137 301-453 20-213 (264)
382 1jl5_A Outer protein YOPM; leu 99.2 6.8E-11 2.3E-15 123.0 10.9 96 98-202 131-228 (454)
383 1jl5_A Outer protein YOPM; leu 99.2 8.6E-11 3E-15 122.2 11.5 116 74-202 131-250 (454)
384 2ca6_A RAN GTPase-activating p 99.1 1.2E-12 4.1E-17 133.4 -3.7 110 75-184 123-258 (386)
385 3goz_A Leucine-rich repeat-con 99.1 5.6E-12 1.9E-16 127.3 0.7 128 75-202 23-180 (362)
386 3dxp_A Putative acyl-COA dehyd 99.1 3E-10 1E-14 114.4 12.6 142 306-454 43-248 (359)
387 2ca6_A RAN GTPase-activating p 99.1 3.7E-12 1.3E-16 129.8 -2.6 130 74-203 159-317 (386)
388 2ast_B S-phase kinase-associat 99.1 2.5E-12 8.7E-17 128.2 -3.8 128 74-201 93-234 (336)
389 2ast_B S-phase kinase-associat 99.1 2.7E-12 9.4E-17 128.0 -3.5 117 62-183 36-156 (336)
390 3g06_A SSPH2 (leucine-rich rep 99.1 1E-10 3.5E-15 125.8 8.4 72 122-202 221-297 (622)
391 3goz_A Leucine-rich repeat-con 99.1 5.6E-12 1.9E-16 127.3 -1.5 113 75-187 52-184 (362)
392 4ay9_X Follicle-stimulating ho 99.1 9.8E-11 3.4E-15 117.5 7.5 115 68-189 7-123 (350)
393 3sg8_A APH(2'')-ID; antibiotic 98.9 3.9E-10 1.3E-14 110.8 4.8 186 306-507 25-288 (304)
394 1z7x_W Ribonuclease inhibitor; 98.9 1.6E-11 5.4E-16 128.0 -8.4 129 74-202 227-383 (461)
395 3rw6_A Nuclear RNA export fact 98.9 2.9E-11 9.9E-16 115.3 -6.1 163 22-188 24-238 (267)
396 1z7x_W Ribonuclease inhibitor; 98.8 1.3E-10 4.3E-15 121.2 -5.5 129 74-202 256-411 (461)
397 3un9_A NLR family member X1; l 98.7 1.7E-10 5.9E-15 116.5 -6.2 128 74-201 101-251 (372)
398 3rw6_A Nuclear RNA export fact 98.7 1.2E-09 4.2E-14 104.0 -0.4 80 95-176 167-257 (267)
399 3un9_A NLR family member X1; l 98.7 6.7E-10 2.3E-14 112.1 -2.6 111 75-185 127-254 (372)
400 3r70_A Aminoglycoside phosphot 98.6 2.1E-07 7.2E-12 91.8 12.4 136 302-454 38-237 (320)
401 3sb4_A Hypothetical leucine ri 98.6 7.1E-08 2.4E-12 95.6 7.0 100 75-176 227-327 (329)
402 1io0_A Tropomodulin; LRR prote 98.5 4.3E-09 1.5E-13 95.2 -2.8 110 74-183 36-164 (185)
403 3d1u_A Putative fructosamine-3 98.5 5.6E-07 1.9E-11 87.2 11.8 142 305-453 19-215 (288)
404 3sb4_A Hypothetical leucine ri 98.4 3.8E-07 1.3E-11 90.4 8.2 124 75-201 102-309 (329)
405 3tdw_A Gentamicin resistance p 98.3 3.1E-06 1.1E-10 82.8 12.2 136 306-454 24-224 (306)
406 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.4E-06 1.2E-10 84.6 11.6 143 305-454 45-243 (362)
407 4gkh_A Aminoglycoside 3'-phosp 98.3 4E-06 1.4E-10 80.3 11.5 135 308-454 31-223 (272)
408 3ats_A Putative uncharacterize 98.2 2.5E-06 8.5E-11 85.4 8.6 81 307-387 26-122 (357)
409 3ogk_B Coronatine-insensitive 98.2 1.9E-07 6.4E-12 100.3 -0.4 103 76-179 140-252 (592)
410 3ogk_B Coronatine-insensitive 98.1 6.7E-07 2.3E-11 95.9 2.2 106 74-180 164-280 (592)
411 2q83_A YTAA protein; 2635576, 98.1 1.6E-05 5.6E-10 78.7 12.1 141 307-453 38-251 (346)
412 1io0_A Tropomodulin; LRR prote 98.1 1.9E-07 6.5E-12 84.3 -2.5 96 89-184 27-137 (185)
413 2ra8_A Uncharacterized protein 98.0 4.5E-07 1.5E-11 90.7 -1.5 107 74-184 172-293 (362)
414 2p1m_B Transport inhibitor res 98.0 1.8E-07 6E-12 100.5 -4.9 127 74-201 372-518 (594)
415 2p1m_B Transport inhibitor res 98.0 1.7E-07 5.7E-12 100.7 -5.7 126 74-201 338-493 (594)
416 2olc_A MTR kinase, methylthior 97.9 3E-05 1E-09 78.7 10.7 76 306-383 35-120 (397)
417 3jr1_A Putative fructosamine-3 97.8 0.00013 4.5E-09 71.1 12.7 139 306-450 41-232 (312)
418 4fdw_A Leucine rich hypothetic 97.8 3.2E-05 1.1E-09 78.5 7.0 104 75-183 227-335 (401)
419 3e4g_A ATP synthase subunit S, 97.8 4.1E-06 1.4E-10 74.0 0.2 82 99-180 62-149 (176)
420 2pyw_A Uncharacterized protein 97.6 0.00023 7.8E-09 72.8 11.4 79 423-503 231-313 (420)
421 3f7w_A Putative fructosamine-3 97.6 0.00011 3.9E-09 70.8 8.7 78 303-385 17-97 (288)
422 3e4g_A ATP synthase subunit S, 97.6 1.3E-05 4.3E-10 70.8 0.4 86 74-159 61-153 (176)
423 2ra8_A Uncharacterized protein 97.5 1.3E-05 4.5E-10 80.0 0.2 125 74-201 139-291 (362)
424 3dxq_A Choline/ethanolamine ki 97.5 0.00035 1.2E-08 67.8 9.4 71 306-385 23-95 (301)
425 4fdw_A Leucine rich hypothetic 97.4 0.00017 5.7E-09 73.2 6.6 106 75-184 249-359 (401)
426 1zyl_A Hypothetical protein YI 97.3 0.0022 7.4E-08 62.9 13.1 159 291-454 11-223 (328)
427 2ppq_A HSK, HK, homoserine kin 97.3 0.002 6.7E-08 63.0 12.2 159 291-453 7-216 (322)
428 1pgv_A TMD-1, tropomodulin TMD 97.2 2E-05 7E-10 70.9 -2.5 109 74-182 41-169 (197)
429 3rfe_A Platelet glycoprotein I 97.1 0.00042 1.4E-08 58.1 5.1 56 78-135 12-68 (130)
430 3rfe_A Platelet glycoprotein I 97.1 0.00044 1.5E-08 58.0 5.1 55 102-158 12-67 (130)
431 1nw1_A Choline kinase (49.2 KD 97.1 0.0019 6.4E-08 66.1 10.6 72 307-385 79-159 (429)
432 3csv_A Aminoglycoside phosphot 97.1 0.0014 4.8E-08 64.5 9.2 142 307-454 24-217 (333)
433 3feg_A Choline/ethanolamine ki 96.9 0.0041 1.4E-07 62.2 10.3 141 307-453 56-253 (379)
434 3c5i_A Choline kinase; choline 96.8 0.003 1E-07 63.1 9.0 73 307-385 39-121 (369)
435 2qg7_A Ethanolamine kinase PV0 96.8 0.0083 2.9E-07 61.6 12.1 73 307-385 114-188 (458)
436 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00021 7E-09 64.3 -0.7 91 90-180 33-136 (197)
437 4gt6_A Cell surface protein; l 96.7 0.0029 9.8E-08 63.9 7.6 87 92-181 282-368 (394)
438 3i1a_A Spectinomycin phosphotr 96.6 0.017 5.8E-07 56.9 12.4 32 423-454 205-236 (339)
439 4h09_A Hypothetical leucine ri 96.5 0.0029 9.9E-08 63.4 6.1 101 76-179 219-319 (379)
440 4fs7_A Uncharacterized protein 96.3 0.0028 9.5E-08 64.0 4.9 87 91-180 290-376 (394)
441 4gt6_A Cell surface protein; l 96.2 0.0036 1.2E-07 63.1 5.0 103 75-183 289-391 (394)
442 4fs7_A Uncharacterized protein 95.9 0.0076 2.6E-07 60.7 5.6 102 75-183 254-355 (394)
443 3f2s_A CK, chetk-alpha, cholin 95.8 0.038 1.3E-06 55.5 10.2 143 307-453 58-279 (401)
444 4h09_A Hypothetical leucine ri 95.1 0.035 1.2E-06 55.3 7.2 88 93-183 212-299 (379)
445 3mes_A Choline kinase; malaria 94.8 0.073 2.5E-06 53.9 8.7 140 307-453 76-290 (424)
446 2ks1_B Epidermal growth factor 94.0 0.044 1.5E-06 35.5 3.1 32 239-270 11-42 (44)
447 2l2t_A Receptor tyrosine-prote 93.8 0.061 2.1E-06 34.7 3.5 33 238-270 9-41 (44)
448 2jwa_A Receptor tyrosine-prote 92.1 0.13 4.4E-06 33.1 3.2 30 240-269 12-41 (44)
449 3g15_A CK, chetk-alpha, cholin 92.0 0.087 3E-06 53.0 3.6 29 425-453 245-279 (401)
450 2yle_A Protein spire homolog 1 89.4 0.59 2E-05 42.2 6.1 105 383-507 33-137 (229)
451 3cxl_A N-chimerin; SH2, RHO-GA 86.1 0.1 3.6E-06 53.5 -1.0 61 305-368 146-214 (463)
452 4ann_A ESSB; membrane protein, 85.3 2.1 7.1E-05 38.5 7.2 116 356-507 43-158 (215)
453 4ano_A ESSB; membrane protein, 84.5 2.6 9E-05 38.0 7.5 84 356-453 48-132 (219)
454 2k1k_A Ephrin type-A receptor 82.3 1.3 4.4E-05 27.7 3.1 14 240-253 11-24 (38)
455 2k9y_A Ephrin type-A receptor 81.1 1 3.4E-05 28.6 2.5 26 239-264 13-38 (41)
456 1iij_A ERBB-2 receptor protein 71.3 1.1 3.7E-05 27.2 0.5 25 242-266 10-34 (35)
457 2l9u_A Receptor tyrosine-prote 51.7 7.2 0.00025 23.2 1.6 27 240-266 7-33 (40)
458 2lz0_A Uncharacterized protein 50.5 37 0.0013 26.0 6.2 46 85-131 7-52 (100)
459 3ls8_A Phosphatidylinositol 3- 46.3 1.5E+02 0.0052 30.9 11.7 47 400-453 453-501 (614)
460 2lz0_A Uncharacterized protein 39.8 31 0.0011 26.5 4.1 37 142-179 16-52 (100)
461 2klu_A T-cell surface glycopro 31.9 37 0.0013 23.7 2.9 8 241-248 12-19 (70)
462 3ox7_P MH027; urokinase-type p 26.5 15 0.00051 19.0 0.1 9 61-69 6-14 (23)
463 1cja_A Protein (actin-fragmin 23.5 2.9E+02 0.01 26.4 8.5 132 311-454 78-237 (342)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.2e-49 Score=388.24 Aligned_cols=204 Identities=28% Similarity=0.474 Sum_probs=177.1
Q ss_pred cCCCcCCeeeeccCccEEEEEeC------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
++|.+.+.||+|+||+||+|++. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 56778899999999999999874 47889999997643 344568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhccccC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 009208 375 LVYPYMPNGSVASRLRDHI---------HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~k 445 (540)
+|||||++|+|.++|+... .....++|..+..++.||++||+|||++ +|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999997531 2245799999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCCCCCce-eeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 446 VGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 446 l~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
|+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~ 233 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 99999998765433322 233468999999999999999999999999999999999 8999974
No 2
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.6e-49 Score=388.79 Aligned_cols=204 Identities=23% Similarity=0.357 Sum_probs=177.6
Q ss_pred CCCcCCeeeeccCccEEEEEeC------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 302 NFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
++.+.+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3556688999999999999873 4688999999876555567789999999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC
Q 009208 376 VYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE 443 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~ 443 (540)
|||||++|+|.++|+.... ....++|..+..|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999965321 124699999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccCCCCC-ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 444 AVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 444 ~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
+||+|||+++....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~ 250 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCC
Confidence 99999999987644322 22345569999999999999999999999999999999999 8999974
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-48 Score=387.89 Aligned_cols=204 Identities=28% Similarity=0.489 Sum_probs=171.2
Q ss_pred cCCCcCCeeeeccCccEEEEEeC------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
++|.+.+.||+|+||+||+|+++ +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45667789999999999999874 47889999997643 344568999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhccccCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC
Q 009208 375 LVYPYMPNGSVASRLRDHIH-----------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE 443 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~ 443 (540)
||||||++|+|.++|+.... ...+++|..+..|+.||++||+|||+. +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999976422 235699999999999999999999999 9999999999999999999
Q ss_pred eEEcccccccccCCCCC-ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 444 AVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 444 ~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
+||+|||+++....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~ 263 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCC
Confidence 99999999987654332 23345679999999999999999999999999999999999 8999974
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-48 Score=381.35 Aligned_cols=200 Identities=33% Similarity=0.492 Sum_probs=168.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.+++.+.+.||+|+||+||+|++++ .||||+++.... .....+|.+|++++++++|||||+++|+|.. +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3567788999999999999998753 699999875432 2334579999999999999999999998864 56899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
||++|+|.++|+.. ...++|..+..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999753 45799999999999999999999999 9999999999999999999999999999876533
Q ss_pred C-Cceeecccccccccccccccc---CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 D-SHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~-~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
. ........||+.|||||++.. ..++.++|||||||++|||+||+.||..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 2 223345679999999999864 3589999999999999999999999974
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.5e-48 Score=386.32 Aligned_cols=203 Identities=23% Similarity=0.360 Sum_probs=174.4
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
++|.+.+.||+|+||+||+|... +|+.||||+++..... .....+.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57889999999999999999975 6999999999765432 334579999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.++|... ....+++..+..++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999753 245689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
. .......||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 179 ~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 228 (350)
T 4b9d_A 179 V-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG 228 (350)
T ss_dssp H-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred c-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 1 2234557999999999999999999999999999999999999999743
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.4e-48 Score=382.80 Aligned_cols=202 Identities=26% Similarity=0.390 Sum_probs=181.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|.+.+.||+|+||+||+|+.. +|+.||||++++... ......+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56899999999999999999975 689999999975432 233567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.+++++. +.+++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 999999999999763 4699999999999999999999999 999999999999999999999999999998754
Q ss_pred CC-CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 458 RD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 458 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 33 23345668999999999999999999999999999999999999999743
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2e-48 Score=387.54 Aligned_cols=198 Identities=24% Similarity=0.361 Sum_probs=178.2
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
+.|+..+.||+|+||+||+|..+ +|+.||||+++.... .....+.+|++++++++|||||++++++.+++..||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 45788899999999999999975 699999999975442 3344688999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
+++|+|.+++.+ ..+++..+..++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 153 LEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 999999999864 3589999999999999999999999 99999999999999999999999999998775433
Q ss_pred CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..
T Consensus 225 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 225 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2 33456799999999999999999999999999999999999999974
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9.5e-48 Score=381.47 Aligned_cols=195 Identities=25% Similarity=0.297 Sum_probs=171.2
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
+.|...+.||+|+||.||+|..+ +|+.||||+++.... ..+|++++++++|||||++++++.+++..+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45777889999999999999975 689999999976432 24799999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEcccccccccCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLLDHR 458 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~Dfgla~~~~~~ 458 (540)
+++|+|.++|++. ..+++..+..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 9999999999763 4699999999999999999999999 999999999999999887 6999999999977543
Q ss_pred CCc----eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 DSH----VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||..
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~ 258 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 221 12335699999999999999999999999999999999999999974
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.8e-47 Score=388.48 Aligned_cols=198 Identities=24% Similarity=0.361 Sum_probs=178.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
+.|+..+.||+|+||.||+|... +|+.||||+++.... .....+.+|+++|++++|||||++++++.+++..||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56888999999999999999975 699999999976542 3344689999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
|++|+|.++++. ..+++..+..++.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 230 LEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 999999999864 3589999999999999999999999 99999999999999999999999999998775433
Q ss_pred CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
. .....+||+.|||||++.+..|+.++|||||||++|||++|+.||..
T Consensus 302 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 302 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp C-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred c-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2 33456799999999999999999999999999999999999999974
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-46 Score=366.46 Aligned_cols=196 Identities=29% Similarity=0.445 Sum_probs=168.2
Q ss_pred CcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEec----CCeeEEEE
Q 009208 304 SAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCST----ENERLLVY 377 (540)
Q Consensus 304 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lV~ 377 (540)
...+.||+|+||+||+|... ++..||+|++...... .....|.+|++++++++|||||++++++.. ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999975 5899999999764432 334579999999999999999999999864 34579999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeEEcccccccccC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~Dfgla~~~~ 456 (540)
|||++|+|.+++++. ..+++..+..++.||++||+|||++ .++|+||||||+|||++ +++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 999999999999763 4699999999999999999999998 12399999999999998 47899999999998644
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.. ......||+.|||||++.+ .|+.++|||||||++|||+||+.||..
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 32 2345679999999998865 699999999999999999999999963
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.7e-48 Score=377.57 Aligned_cols=201 Identities=28% Similarity=0.371 Sum_probs=170.8
Q ss_pred cCCCcCCeeeeccCccEEEEEeC----CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
++|++.+.||+|+||+||+|+.. .++.||||+++..... ....++.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56899999999999999999852 4789999999754322 233468899999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++.+. ..+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 99999999999999763 4699999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.... .......||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 4322 2234567999999999999999999999999999999999999999743
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.7e-46 Score=363.10 Aligned_cols=198 Identities=24% Similarity=0.427 Sum_probs=163.0
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|++.+.||+|+||+||+|... +|+.||+|+++.... ......+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999974 699999999976432 233457999999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+ +|+|.+++.+ ...+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 6899999875 35799999999999999999999999 999999999999999999999999999986653
Q ss_pred CCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.. ......||+.|||||++.+..+ +.++||||+||++|||+||+.||+.
T Consensus 165 ~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 22 2344679999999999988776 5899999999999999999999974
No 13
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.1e-47 Score=380.14 Aligned_cols=215 Identities=26% Similarity=0.359 Sum_probs=185.8
Q ss_pred cCHHHHHHHhcCCCcCCeeeeccCccEEEEEeCC------CcEEEEEEeccCCccccHHHHHHHHHHHhcccC-CCccce
Q 009208 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVH-RNLLRL 363 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l 363 (540)
+..++++...++|.+.+.||+|+||+||+|.+.. ++.||||.++........++|.+|++++.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4455666677899999999999999999998642 468999999876655556789999999999976 899999
Q ss_pred eEEEecC-CeeEEEEecCCCCChhhhccccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 009208 364 CGFCSTE-NERLLVYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRD 430 (540)
Q Consensus 364 ~~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~D 430 (540)
+|+|..+ +..++|||||++|+|.++|+.... ....++|..+..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 568999999999999999975321 134589999999999999999999999 999999
Q ss_pred CCCCceeeCCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 431 VKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 431 lk~~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
|||+|||+++++.+||+|||+|+.+...... ......||+.|||||++.+..++.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876544333 3445679999999999999999999999999999999998 9999974
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.9e-46 Score=369.41 Aligned_cols=199 Identities=27% Similarity=0.402 Sum_probs=164.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC----eeEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN----ERLLV 376 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~lV 376 (540)
.+|.+.+.||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++|+|..++ ..+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 3567788999999999999998 68999999997532 11223345666667889999999999997654 57999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ-----CDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-----~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
||||++|+|.++|++ ..++|..+.+++.|+++||+|||++ +.++|+||||||+|||+++++.+||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 999999999999975 3589999999999999999999976 356899999999999999999999999999
Q ss_pred ccccCCCCCce---eeccccccccccccccccC------CCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 452 AKLLDHRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 452 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
++......... .....||+.|||||++.+. .++.++|||||||++|||+||+.||.
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~ 219 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence 98765543322 2345699999999998754 46789999999999999999988775
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.5e-45 Score=361.10 Aligned_cols=200 Identities=26% Similarity=0.401 Sum_probs=163.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC--------
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN-------- 371 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-------- 371 (540)
++|++.+.||+|+||+||+|..+ +|+.||||+++..........+.+|++++++++|||||++++++...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888999999999999999975 689999999986554455567999999999999999999999986543
Q ss_pred ----eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEc
Q 009208 372 ----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 447 (540)
Q Consensus 372 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 447 (540)
..++||||+++|+|.+++.... .....++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 3689999999999999997532 223467788899999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCc-----------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 448 DFGLAKLLDHRDSH-----------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 448 Dfgla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
|||+|+.+...... .....+||+.|||||++.+..|+.++|||||||++|||++ ||.
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 99999876543221 1223569999999999999999999999999999999996 776
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=359.85 Aligned_cols=201 Identities=21% Similarity=0.336 Sum_probs=171.8
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEec------CCe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCST------ENE 372 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~ 372 (540)
++|.+.+.||+|+||+||+|... +|+.||||+++.... ......+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 56889999999999999999975 699999999975432 2334568899999999999999999998754 357
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.|||||||+ |+|.+++.+ ...+++..+..++.||+.||.|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999996 678888864 45799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---CceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 453 KLLDHRD---SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 453 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+.+.... .......+||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 8764321 2223456799999999998775 5699999999999999999999999754
No 17
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.2e-43 Score=351.63 Aligned_cols=254 Identities=72% Similarity=1.152 Sum_probs=210.2
Q ss_pred cCCCCCCCccccCcccccCHHHHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHh
Q 009208 274 DVNDQYDPEVSLGHLKRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETIS 353 (540)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~ 353 (540)
+.....++....+....+++.++....++|...+.||+|+||.||+|...+|+.||||+++..........+.+|++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~ 82 (326)
T 3uim_A 3 DVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMIS 82 (326)
T ss_dssp ------------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGG
T ss_pred CCCcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHH
Confidence 33445566666777889999999999999999999999999999999988899999999987554444447899999999
Q ss_pred cccCCCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 009208 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433 (540)
Q Consensus 354 ~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~ 433 (540)
.++||||+++++++...+..++||||+++|+|.++++........+++..+..++.|++.||+|||+.+.++|+||||||
T Consensus 83 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp 162 (326)
T 3uim_A 83 MAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 162 (326)
T ss_dssp TCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSG
T ss_pred hccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCch
Confidence 99999999999999999999999999999999999987666667799999999999999999999998888999999999
Q ss_pred CceeeCCCCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcccccc
Q 009208 434 ANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN 513 (540)
Q Consensus 434 ~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~~~~ 513 (540)
+||++++++.+||+|||+++..............||+.|+|||++.+..++.++||||||+++|||++|+.||+......
T Consensus 163 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 242 (326)
T 3uim_A 163 ANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242 (326)
T ss_dssp GGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT
T ss_pred hhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc
Confidence 99999999999999999998776555555556679999999999988899999999999999999999999997433222
Q ss_pred -cCCcHHHHHHHHhh
Q 009208 514 -QRGVMLDWVCSHIL 527 (540)
Q Consensus 514 -~~~~~~~w~~~~~~ 527 (540)
......+|+.....
T Consensus 243 ~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 243 DDDVMLLDWVKGLLK 257 (326)
T ss_dssp TSCSBHHHHHTTTTS
T ss_pred ccchhHHHHHHHHhh
Confidence 23334466665444
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.1e-42 Score=351.46 Aligned_cols=199 Identities=23% Similarity=0.382 Sum_probs=171.0
Q ss_pred HHhcCCCcCCeeeeccCccEEEEEeC----CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCe
Q 009208 298 AATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENE 372 (540)
Q Consensus 298 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 372 (540)
...+.|.+.+.||+|+||+||+|+.+ .++.||+|++.... ...++.+|++++..+ .||||+++++++.+++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 34578999999999999999999853 46889999986543 345688999999988 69999999999999999
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGL 451 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~Dfgl 451 (540)
.++||||+++|+|.+++. .+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 999999999999999884 388999999999999999999999 99999999999999876 7999999999
Q ss_pred ccccCCCCC---------------------------ceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCC
Q 009208 452 AKLLDHRDS---------------------------HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQ 503 (540)
Q Consensus 452 a~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~ 503 (540)
|+....... ......+||+.|+|||++.+. .++.++||||+||++|||+||+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 986543211 112334699999999999775 5899999999999999999999
Q ss_pred CCCCcc
Q 009208 504 RALDFG 509 (540)
Q Consensus 504 ~p~~~~ 509 (540)
.||..+
T Consensus 245 ~Pf~~~ 250 (361)
T 4f9c_A 245 YPFYKA 250 (361)
T ss_dssp SSSSCC
T ss_pred CCCCCC
Confidence 999644
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.8e-43 Score=370.93 Aligned_cols=200 Identities=29% Similarity=0.393 Sum_probs=173.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHH---HHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQT---EVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~---E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.++|.+.++||+|+||+||+|..+ +|+.||+|++++... ........+ +++++..++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367899999999999999999975 699999999975322 122223333 46667788999999999999999999
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
|+||||++||+|.++|.+. +.+++..+..++.||+.||+|||++ +||||||||+|||++++|.+||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 9999999999999999763 4699999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.+.... ....+||+.|||||++.. ..|+.++||||+||++|||++|+.||...
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~ 394 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 394 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGG
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 765432 344679999999999975 57899999999999999999999999743
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.9e-41 Score=360.25 Aligned_cols=200 Identities=24% Similarity=0.383 Sum_probs=178.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|..+ +|+.||+|+++... ......+.+|+++|+.++|||||++++++.+++..++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 367999999999999999999975 68999999997644 3334578999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC--CCeEEcccccccccC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED--FEAVVGDFGLAKLLD 456 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~--~~~kl~Dfgla~~~~ 456 (540)
||++|+|.++|.+. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++.+.
T Consensus 235 ~~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 235 FMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred ecCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 99999999998642 35699999999999999999999999 99999999999999854 899999999999876
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|||||++.+..|+.++||||+||++|||++|+.||..
T Consensus 309 ~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~ 358 (573)
T 3uto_A 309 PKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358 (573)
T ss_dssp TTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 433 33455799999999999999999999999999999999999999974
No 21
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=7.3e-41 Score=347.02 Aligned_cols=212 Identities=22% Similarity=0.329 Sum_probs=183.9
Q ss_pred HHHHHHHhcCCCcCCeeeeccCccEEEEEeCC-CcEEEEEEeccCCcc--ccHHHHHHHHHHHhcccCCCccceeEEEec
Q 009208 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCST 369 (540)
Q Consensus 293 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 369 (540)
+.+++...++|.+.+.||+|+||+||+|..++ ++.||+|+++..... .....+.+|..++..++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 44555667899999999999999999999864 789999999753211 112248899999999999999999999999
Q ss_pred CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccc
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 449 (540)
.+..++||||+++|+|.+++.+. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcch
Confidence 99999999999999999999752 35699999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccc-----cCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
|+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||...+
T Consensus 220 Gla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~ 285 (437)
T 4aw2_A 220 GSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES 285 (437)
T ss_dssp TTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred hhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence 999876654444445567999999999987 4578999999999999999999999997543
No 22
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.4e-39 Score=325.27 Aligned_cols=227 Identities=41% Similarity=0.731 Sum_probs=192.4
Q ss_pred CHHHHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC
Q 009208 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (540)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 371 (540)
++.++...+++|...+.||+|+||.||+|..++++.||||++.... ......+.+|++++..++||||+++++++...+
T Consensus 30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3444555778999999999999999999999889999999987653 344567999999999999999999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
..++||||+++|+|.+++.........++|..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999999976544445699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC-CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcccccccCCcHHHHHH
Q 009208 452 AKLLDHRD-SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAANQRGVMLDWVC 523 (540)
Q Consensus 452 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~~~~~~~~~~~w~~ 523 (540)
++...... ........||+.|+|||++.+..++.++||||||+++|||++|+.||....+.+ .....+|..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~-~~~~~~~~~ 257 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE-MVNLAEWAV 257 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSS-CCCHHHHTH
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHH-HHHHHHHhh
Confidence 98654322 222334458999999999998999999999999999999999999998544332 223445544
No 23
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.9e-40 Score=341.33 Aligned_cols=210 Identities=22% Similarity=0.347 Sum_probs=181.8
Q ss_pred HHHHHHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEec
Q 009208 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCST 369 (540)
Q Consensus 293 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 369 (540)
+.+++...++|.+.+.||+|+||.||+|..+ +++.||+|+++.... ......+.+|++++..++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556788999999999999999999986 589999999865321 1122357899999999999999999999999
Q ss_pred CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccc
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 449 (540)
.+..++||||+++|+|.+++++ ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 9999999999999999999875 2589999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCC----CCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ----SSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
|+++..............||+.|+|||++.... ++.++|||||||++|||++|+.||...+
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 277 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence 999876654433344667999999999997655 7899999999999999999999997543
No 24
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=340.61 Aligned_cols=213 Identities=23% Similarity=0.323 Sum_probs=183.8
Q ss_pred CHHHHHHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEe
Q 009208 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCS 368 (540)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 368 (540)
.+++.+...++|.+.+.||+|+||.||++..+ +|+.||+|++++... ......+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34455556788999999999999999999985 689999999975321 111234789999999999999999999999
Q ss_pred cCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcc
Q 009208 369 TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGD 448 (540)
Q Consensus 369 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 448 (540)
+.+..++||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999753 23689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCceeeccccccccccccccc-------cCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 449 FGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS-------TGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 449 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
||+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 274 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence 9999877654433344567999999999987 3568999999999999999999999997543
No 25
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=329.42 Aligned_cols=202 Identities=25% Similarity=0.404 Sum_probs=170.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||||++...........+.+|++++.+++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 56788999999999999999996 47899999999765544444578999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 89 ~~~gg~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 161 (347)
T 3zgw_A 89 YCPGGELFDYIISQ----DRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN 161 (347)
T ss_dssp CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC----
T ss_pred CCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCC
Confidence 99999999998753 4689999999999999999999999 9999999999999999999999999999866544
Q ss_pred CCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.........||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp ----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 4333455679999999999988775 8999999999999999999999974
No 26
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.4e-38 Score=314.46 Aligned_cols=199 Identities=23% Similarity=0.377 Sum_probs=178.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
..+|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 46788999999999999999986 468999999987554 3345678999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++.+. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999752 589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 218 (297)
T 3fxz_A 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (297)
T ss_dssp TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 32 23345699999999999999999999999999999999999999974
No 27
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.2e-39 Score=321.84 Aligned_cols=211 Identities=23% Similarity=0.327 Sum_probs=184.9
Q ss_pred cccCHHHHHHHhcC----------CCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccC
Q 009208 289 KRYTFKELRAATSN----------FSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH 357 (540)
Q Consensus 289 ~~~~~~~l~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h 357 (540)
..+++++++.+++. |...+.||+|+||.||+|... +|+.||||+++... ......+.+|+.++++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 45778888877765 566679999999999999986 69999999997644 3445678999999999999
Q ss_pred CCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 009208 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL 437 (540)
Q Consensus 358 ~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIL 437 (540)
|||+++++++...+..++||||+++|+|.+++.+ ..+++..+..++.|+++||.|||+. +|+||||||+||+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999998864 3589999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 438 LDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 438 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++.++.+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~ 244 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999987654322 233456999999999999999999999999999999999999999743
No 28
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-38 Score=320.28 Aligned_cols=201 Identities=24% Similarity=0.319 Sum_probs=177.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC--ccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN--IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|..+ +|+.||+|+++... .......+.+|++++..++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357888999999999999999975 68999999997542 123445788999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++.+. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999999999998753 4689999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 207 (337)
T 1o6l_A 157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence 222 223455699999999999999999999999999999999999999974
No 29
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=314.44 Aligned_cols=202 Identities=30% Similarity=0.498 Sum_probs=176.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|...+.||+|+||.||+|... +++.||+|++.... ......+.+|++++.+++||||+++++++..++..++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 356788899999999999999975 58999999986533 3445679999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 99999999999763 35699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCce-------------eeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 DSHV-------------TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... .....||+.|+|||++.+..++.++||||||+++|||++|..|+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 2211 1145699999999999999999999999999999999999999874
No 30
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-38 Score=314.20 Aligned_cols=203 Identities=26% Similarity=0.371 Sum_probs=173.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc--ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +++.||+|++...... .....+.+|++++.+++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357888999999999999999964 6899999998654322 2235789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 9999999999999753 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
...........||+.|+|||.+.+..++.++||||||+++|||+||+.||+..
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 44333344556999999999999999999999999999999999999999743
No 31
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=325.83 Aligned_cols=201 Identities=25% Similarity=0.362 Sum_probs=176.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcccc--HHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGG--EVQFQTEVETISLA-VHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 375 (540)
.++|.+.+.||+|+||.||+|+.+ +++.||+|+++....... ...+.+|..++.++ +||||+++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467889999999999999999976 578999999986542222 23578899999876 89999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|..++.+. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 99999999999998753 4699999999999999999999999 9999999999999999999999999999853
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 204 ~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 204 LRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred ccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 322 2234456799999999999999999999999999999999999999974
No 32
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=324.75 Aligned_cols=200 Identities=26% Similarity=0.340 Sum_probs=176.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC--ccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN--IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|.+.+.||+|+||.||++... +++.||+|+++... .......+.+|++++..++||||+++++++...+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888999999999999999975 58899999986532 1233457889999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++.+..
T Consensus 95 e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp CCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 99999999999875 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeecccccccccccccccc---CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 168 ~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~ 220 (384)
T 4fr4_A 168 ET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR 220 (384)
T ss_dssp TC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence 32 2345569999999999864 35899999999999999999999999743
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.1e-38 Score=319.32 Aligned_cols=201 Identities=25% Similarity=0.402 Sum_probs=177.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
..+|.+.+.||+|+||.||+|.. .+|+.||||++..... .....++.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46788999999999999999997 5799999999976432 233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 999999999999753 4689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCC-ccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSS-EKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. ......||+.|+|||++.+..++ .++||||+||++|||++|+.||+..
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 32 23445699999999999887764 8999999999999999999999743
No 34
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=325.09 Aligned_cols=203 Identities=30% Similarity=0.391 Sum_probs=173.6
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC--ccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN--IAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 374 (540)
..++|.+.+.||+|+||.||+|..+ +|+.||+|+++... .......+.+|.+++..+ +||||+++++++...+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999975 58999999997542 123345678999999987 6999999999999999999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999999753 4699999999999999999999999 999999999999999999999999999985
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 174 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 227 (353)
T 3txo_A 174 GICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCC
Confidence 4322 22334557999999999999888999999999999999999999999743
No 35
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.9e-38 Score=323.26 Aligned_cols=206 Identities=30% Similarity=0.437 Sum_probs=178.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC--------CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTE 370 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 370 (540)
.++|.+.+.||+|+||.||+|... ++..||||+++.........++.+|++++.++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888899999999999999852 35679999998765444556799999999999 899999999999999
Q ss_pred CeeEEEEecCCCCChhhhccccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 009208 371 NERLLVYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (540)
Q Consensus 371 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 438 (540)
+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999976421 124589999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 439 DEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~ 308 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999866543221 2233457889999999999999999999999999999999 9999974
No 36
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-38 Score=317.36 Aligned_cols=203 Identities=26% Similarity=0.397 Sum_probs=174.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... +++.||||++...........+.+|+.++..++||||+++++++...+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 357889999999999999999976 7899999999765544445678999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999998864 35699999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-ceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DS-HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||+..
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 211 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 21 22234569999999999987765 78999999999999999999999743
No 37
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=323.96 Aligned_cols=203 Identities=17% Similarity=0.184 Sum_probs=175.7
Q ss_pred HhcCCCcCCeeeeccCccEEEEE------eCCCcEEEEEEeccCCccccHHHHHHHHHHHhccc---CCCccceeEEEec
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGC------FSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV---HRNLLRLCGFCST 369 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 369 (540)
..++|.+.+.||+|+||.||+|. ..+++.||||+++.. ...++..|++++..++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 35678889999999999999994 346899999998753 3456788888888776 9999999999999
Q ss_pred CCeeEEEEecCCCCChhhhccccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--------
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIH-GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-------- 440 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-------- 440 (540)
.+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999975322 245799999999999999999999999 9999999999999998
Q ss_pred ---CCCeEEcccccccccCC-CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 441 ---DFEAVVGDFGLAKLLDH-RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 441 ---~~~~kl~Dfgla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
++.+||+|||+++.+.. ..........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 89999999999976542 223344556799999999999999999999999999999999999999963
No 38
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.6e-37 Score=308.30 Aligned_cols=218 Identities=43% Similarity=0.739 Sum_probs=189.5
Q ss_pred cccccCHHHHHHHhcCCCcC------CeeeeccCccEEEEEeCCCcEEEEEEeccCC---ccccHHHHHHHHHHHhcccC
Q 009208 287 HLKRYTFKELRAATSNFSAK------NILGRGGFGIVYKGCFSDGALVAVKRLKDYN---IAGGEVQFQTEVETISLAVH 357 (540)
Q Consensus 287 ~~~~~~~~~l~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h 357 (540)
....+++.++..++.+|... +.||+|+||.||+|.. +++.||||++.... .......+.+|++++.+++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45678999999999999887 8999999999999987 68899999987532 12335679999999999999
Q ss_pred CCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 009208 358 RNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANIL 437 (540)
Q Consensus 358 ~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NIL 437 (540)
|||+++++++...+..++||||+++|+|.+++... .....+++..+..++.|+++||.|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTG-GGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 99999999999999999999999999999998753 2345699999999999999999999999 9999999999999
Q ss_pred eCCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 438 LDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 438 l~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
+++++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||+...
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 999999999999999876543222 2334569999999998764 58899999999999999999999998543
No 39
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=316.31 Aligned_cols=198 Identities=30% Similarity=0.398 Sum_probs=176.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|+++.... ......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 356888999999999999999975 689999999975421 22345688999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999975 24689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 32 2345699999999999999999999999999999999999999974
No 40
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.5e-38 Score=318.74 Aligned_cols=205 Identities=29% Similarity=0.420 Sum_probs=178.1
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcc-cCCCccceeEEEecCCe
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENE 372 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 372 (540)
....++|.+.+.||+|+||.||+|..+ +|+.||+|+++.... ......+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999985 589999999976421 23345678899999876 89999999999999999
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 99999999999999999753 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 166 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 166 KENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp BCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 8543222 2234567999999999999999999999999999999999999999743
No 41
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.1e-38 Score=317.36 Aligned_cols=200 Identities=23% Similarity=0.324 Sum_probs=178.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-----cHHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.+.|.+.+.||+|+||.||+|... +|+.||+|.++...... ....+.+|++++.+++||||+++++++...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467889999999999999999975 58999999997654322 356799999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDF 449 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~Df 449 (540)
++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||++++++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 999999999999999864 35699999999999999999999999 999999999999998777 7999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 9998765432 23345699999999999988999999999999999999999999974
No 42
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.3e-38 Score=313.12 Aligned_cols=202 Identities=25% Similarity=0.355 Sum_probs=172.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|...+|+.||+|+++...... ....+.+|++++++++||||+++++++..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788899999999999999999889999999997544322 24578899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++ +|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 788777642 34689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 173 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 223 (311)
T 3niz_A 173 VRS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223 (311)
T ss_dssp CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence 222 233468999999999876 56899999999999999999999999743
No 43
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=312.71 Aligned_cols=202 Identities=21% Similarity=0.341 Sum_probs=176.6
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC--eeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN--ERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV~ 377 (540)
++|.+.+.||+|+||.||+|... +++.||||+++..........+.+|++++.+++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888899999999999999986 489999999987655556677899999999999999999999987655 679999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL----DEDFEAVVGDFGLAK 453 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~Dfgla~ 453 (540)
||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp ECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred eCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 9999999999998642 233489999999999999999999999 99999999999999 778889999999998
Q ss_pred ccCCCCCceeeccccccccccccccc--------cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLS--------TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
....... .....||+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 165 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 225 (319)
T 4euu_A 165 ELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (319)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred ecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7654332 23446999999999986 56789999999999999999999999974
No 44
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=4.5e-38 Score=333.20 Aligned_cols=206 Identities=28% Similarity=0.393 Sum_probs=181.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|...+.||+|+||.||+|..+ +|+.||+|+++.... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999985 689999999975432 23345788999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++.........+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999986544456799999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 4332 233457999999999999999999999999999999999999999753
No 45
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3e-38 Score=319.02 Aligned_cols=198 Identities=25% Similarity=0.313 Sum_probs=177.2
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|.+.+.||+|+||.||+|... +|+.||+|+++.... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56888899999999999999975 689999999875431 233457889999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 999999999999763 4589999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 241 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCC
Confidence 2 23456999999999999999999999999999999999999999743
No 46
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.9e-38 Score=313.98 Aligned_cols=204 Identities=32% Similarity=0.494 Sum_probs=169.2
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
...+|.+.+.||+|+||.||+|.. +|+.||||++...... ....++.+|++++.+++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 456788899999999999999987 6889999998765432 22357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||+++|+|.+++... .....+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 114 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 114 EYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp ECCTTCBHHHHHHST-THHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred ecCCCCcHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999752 1122489999999999999999999998 8 999999999999999999999999999855
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~ 241 (309)
T 3p86_A 190 ASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred cccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 4322 223345699999999999999999999999999999999999999974
No 47
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.1e-38 Score=318.61 Aligned_cols=204 Identities=22% Similarity=0.325 Sum_probs=177.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc----cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI----AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
+.|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|++++..++||||+++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56888999999999999999875 689999999864321 1235679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEcccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDFGLA 452 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~Dfgla 452 (540)
||||+++|+|.+++.+.......+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 9999999999988876444445689999999999999999999999 9999999999999986654 999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 87654322 23345699999999999998999999999999999999999999974
No 48
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=315.04 Aligned_cols=202 Identities=29% Similarity=0.450 Sum_probs=174.9
Q ss_pred cCCCcCCeeeeccCccEEEEEeC----CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
++|.+.+.||+|+||.||+|.+. .+..||||+++..........+.+|++++.+++||||+++++++...+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56778899999999999999984 35569999998765455566899999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.++++.. ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 129 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 129 TEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred eeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 9999999999999643 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc--eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 457 HRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 457 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
..... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 43222 2223346788999999998899999999999999999999 9999963
No 49
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.3e-38 Score=315.68 Aligned_cols=200 Identities=26% Similarity=0.366 Sum_probs=176.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc--cHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 376 (540)
++|.+.+.||+|+||.||+|..+ +++.||+|+++...... ....+.+|..++.++ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888899999999999999985 58999999998654322 234578999999887 899999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 89 ~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 9999999999998753 4689999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+.
T Consensus 162 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 162 RPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 222 223455799999999999999999999999999999999999999974
No 50
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.3e-38 Score=307.12 Aligned_cols=201 Identities=28% Similarity=0.475 Sum_probs=178.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
.++|.+.+.||+|+||.||+|...+++.||+|+++... ....++.+|++++.+++||||+++++++..++..++||||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 35688889999999999999999889999999998654 3346799999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 87 MEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp CTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 9999999999653 34689999999999999999999999 99999999999999999999999999998665433
Q ss_pred CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
........+|+.|+|||.+....++.++||||+|+++|||++ |+.||..
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 222334457788999999998999999999999999999999 9999974
No 51
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.5e-38 Score=318.68 Aligned_cols=203 Identities=26% Similarity=0.344 Sum_probs=177.8
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCC-CcEEEEEEeccCCc--cccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNI--AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 374 (540)
..++|.+.+.||+|+||.||+|..+. |+.||+|+++.... ......+..|.+++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 35789999999999999999999864 78999999975431 23345688999999887 7999999999999999999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 999999999999999753 4689999999999999999999999 999999999999999999999999999985
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 171 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 224 (353)
T 2i0e_A 171 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224 (353)
T ss_dssp CCCTT-CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCC-cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCC
Confidence 43222 2234567999999999999999999999999999999999999999743
No 52
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.6e-38 Score=304.73 Aligned_cols=201 Identities=30% Similarity=0.476 Sum_probs=179.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
.++|.+.+.||+|+||.||+|..+++..||+|+++... ....++.+|++++.+++||||+++++++...+..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 46788889999999999999999888899999997644 2346799999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 85 ISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp CTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred cCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 9999999999763 33589999999999999999999999 99999999999999999999999999998766544
Q ss_pred CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||+.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 333344457788999999998899999999999999999999 9999974
No 53
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.1e-37 Score=311.13 Aligned_cols=205 Identities=28% Similarity=0.407 Sum_probs=164.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|+++..........+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467889999999999999999875 5899999999865544445678999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 379 YMPNGSVASRLRDHI--HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|++ |+|.+++.... .....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 69999886532 2224589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 3322 22334689999999998764 6899999999999999999999999754
No 54
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.8e-38 Score=321.32 Aligned_cols=203 Identities=29% Similarity=0.466 Sum_probs=166.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC----CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
..+|.+.+.||+|+||.||+|... ++..||||+++.........+|.+|++++.+++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999875 5778999999865444455689999999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 99999999999999753 34699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCce--eeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 456 DHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 456 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 5432211 122235778999999999999999999999999999998 9999963
No 55
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.7e-38 Score=315.81 Aligned_cols=202 Identities=26% Similarity=0.350 Sum_probs=168.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEe----CCCcEEEEEEeccCCc---cccHHHHHHHHHHHhcccCCCccceeEEEecCCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF----SDGALVAVKRLKDYNI---AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 372 (540)
.++|.+.+.||+|+||.||++.. .+|+.||+|+++.... ......+.+|++++.+++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46788999999999999999987 4789999999976532 1233467899999999999999999999999999
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 99999999999999998753 4688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 224 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCC
Confidence 7543222 2234456999999999999989999999999999999999999999743
No 56
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.3e-38 Score=332.40 Aligned_cols=203 Identities=29% Similarity=0.407 Sum_probs=179.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|...+.||+|+||.||+|... +|+.||+|+++.... ......+.+|++++..++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999985 689999999975421 23345688999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++... ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~--~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 9999999999998753 234599999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 338 ~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 338 EGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp TTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred cCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 432 233457999999999999989999999999999999999999999854
No 57
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=310.64 Aligned_cols=199 Identities=22% Similarity=0.308 Sum_probs=177.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... +++.||+|.++... .....+.+|++++..++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 467888999999999999999975 58899999987532 334568899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--CCCeEEcccccccccC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--DFEAVVGDFGLAKLLD 456 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~--~~~~kl~Dfgla~~~~ 456 (540)
|+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 82 ~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 82 FISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred eCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 99999999998642 34689999999999999999999999 9999999999999997 7899999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 205 (321)
T 1tki_A 156 PGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205 (321)
T ss_dssp TTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence 433 23445699999999999988899999999999999999999999974
No 58
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.4e-37 Score=311.85 Aligned_cols=204 Identities=24% Similarity=0.367 Sum_probs=174.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC-------
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN------- 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------- 371 (540)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++++++||||+++++++...+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888999999999999999986 799999999986655555678999999999999999999999985543
Q ss_pred --------------------------------------------------eeEEEEecCCCCChhhhccccCCCCCCCCH
Q 009208 372 --------------------------------------------------ERLLVYPYMPNGSVASRLRDHIHGRPALDW 401 (540)
Q Consensus 372 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~ 401 (540)
..++||||+++|+|.+++.... .....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC-SLEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-SGGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-Cccchhh
Confidence 2789999999999999998642 2345678
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCCC-----------ceeecccccc
Q 009208 402 ARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDS-----------HVTTAVRGTV 470 (540)
Q Consensus 402 ~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~gt~ 470 (540)
..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 999999999999999999999999999987664321 1123346999
Q ss_pred ccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 471 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 471 ~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
.|+|||++.+..++.++||||||+++|||++|..|+.
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~ 277 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM 277 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence 9999999999999999999999999999999988874
No 59
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.1e-38 Score=319.61 Aligned_cols=216 Identities=25% Similarity=0.369 Sum_probs=183.3
Q ss_pred ccCHHHHHHHhcCCCcCCeeeeccCccEEEEEe------CCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccc
Q 009208 290 RYTFKELRAATSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLR 362 (540)
Q Consensus 290 ~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~ 362 (540)
.+...++....++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 344556666788999999999999999999974 246899999998765455556799999999999 7899999
Q ss_pred eeEEEecCCe-eEEEEecCCCCChhhhccccCCC----------------------------------------------
Q 009208 363 LCGFCSTENE-RLLVYPYMPNGSVASRLRDHIHG---------------------------------------------- 395 (540)
Q Consensus 363 l~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~~---------------------------------------------- 395 (540)
+++++...+. .++||||+++|+|.++++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 89999999999999999764221
Q ss_pred ----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 396 ----------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 396 ----------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12289999999999999999999999 99999999999999999999999999998664332
Q ss_pred C-ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 460 S-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 460 ~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
. .......||+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 298 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCc
Confidence 2 23344568999999999999999999999999999999998 9999974
No 60
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.9e-38 Score=322.96 Aligned_cols=203 Identities=28% Similarity=0.420 Sum_probs=176.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|.+. +++.||||.++.........+|.+|++++.+++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888899999999999999986 6899999999865433344578999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 99999999999753 24589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCcee-eccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 459 DSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 459 ~~~~~-~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
..... ....+++.|+|||.+....++.++|||||||++|||+| |+.||..
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~ 318 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN 318 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11111 12235778999999998899999999999999999998 9999974
No 61
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=309.24 Aligned_cols=199 Identities=23% Similarity=0.338 Sum_probs=177.0
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-----ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-----GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
+.|.+.+.||+|+||.||+|... +|+.||+|.++..... .....+.+|++++.+++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56888999999999999999975 5899999999764422 23567999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEcccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDFG 450 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~Dfg 450 (540)
+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999864 35689999999999999999999999 999999999999999887 89999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
+++....... .....||+.|+|||++....++.++|||||||++|||++|+.||..
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 9987653322 2345699999999999988999999999999999999999999974
No 62
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.2e-37 Score=314.39 Aligned_cols=200 Identities=24% Similarity=0.372 Sum_probs=176.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|+++..... .....+.+|++++.+++||||+++++++...+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 467999999999999999999975 5899999999765432 23456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---EAVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~Dfgla~~ 454 (540)
||+++|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++ .+||+|||++..
T Consensus 108 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 108 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp CCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999998864 34689999999999999999999999 999999999999998654 599999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 181 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 181 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp CTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 65432 22345699999999999998999999999999999999999999974
No 63
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.9e-38 Score=319.25 Aligned_cols=202 Identities=28% Similarity=0.354 Sum_probs=169.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc--ccHHHHHHHHHH-HhcccCCCccceeEEEecCCeeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVET-ISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
.++|.+.+.||+|+||.||+|+.+ +++.||+|+++..... .....+.+|..+ ++.++||||+++++++...+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356888999999999999999986 5889999999765432 223356777776 467899999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 99999999999998753 4688999999999999999999999 9999999999999999999999999999864
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 190 IEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp BCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 3222 2334567999999999999999999999999999999999999999743
No 64
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=304.24 Aligned_cols=200 Identities=27% Similarity=0.407 Sum_probs=168.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-------------------------cHHHHHHHHHHHh
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-------------------------GEVQFQTEVETIS 353 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------------------------~~~~~~~E~~~l~ 353 (540)
.++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367888999999999999999874 68999999987543211 1246889999999
Q ss_pred cccCCCccceeEEEec--CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 009208 354 LAVHRNLLRLCGFCST--ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDV 431 (540)
Q Consensus 354 ~l~h~nIv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl 431 (540)
+++||||+++++++.. .+..++||||+++++|.+++. ...+++..+..++.|+++||+|||+. +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 567899999999999887654 34699999999999999999999999 9999999
Q ss_pred CCCceeeCCCCCeEEcccccccccCCCCCceeeccccccccccccccccCC---CCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 432 KAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 432 k~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
||+||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 233456999999999987655 47889999999999999999999974
No 65
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-37 Score=305.93 Aligned_cols=201 Identities=23% Similarity=0.361 Sum_probs=171.5
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
++|.+.+.||+|+||.||+|...+|+.||+|+++..... .....+.+|++++.+++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468888999999999999999988999999999754422 2235788999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 985 888888643 35689999999999999999999999 99999999999999999999999999998665332
Q ss_pred CceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 204 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV 204 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2 22334589999999998764 5899999999999999999999999743
No 66
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-38 Score=314.86 Aligned_cols=208 Identities=27% Similarity=0.427 Sum_probs=179.3
Q ss_pred HHhcCCCcCCeeeeccCccEEEEEeC------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC
Q 009208 298 AATSNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (540)
Q Consensus 298 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 371 (540)
...++|.+.+.||+|+||.||+|... +++.||||.++..........+.+|++++.+++||||+++++++...+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578899999999999999999974 348899999987654445567999999999999999999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHG--------------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDV 431 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dl 431 (540)
..++||||+++|+|.+++...... ...+++..++.++.|+++||.|||+. +|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 999999999999999999764211 25799999999999999999999999 9999999
Q ss_pred CCCceeeCCCCCeEEcccccccccCCCCC-ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 432 KAANILLDEDFEAVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 432 k~~NILl~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
||+||++++++.+||+|||+++....... .......+|+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999986543221 12234458899999999998899999999999999999999 9999974
No 67
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-37 Score=311.02 Aligned_cols=199 Identities=23% Similarity=0.417 Sum_probs=174.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
..+|.+.+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+++++.++||||+++++++..++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788899999999999999997 4789999999865321 22234789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+ +|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 78999888653 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||++.+..+ ++++|||||||++|||++|+.||+.
T Consensus 160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 432 2234569999999999988776 7899999999999999999999974
No 68
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=320.59 Aligned_cols=202 Identities=22% Similarity=0.336 Sum_probs=176.2
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
..++|.+.+.||+|+||.||+|... +|+.||+|++...... .....+.+|++++++++||||+++++++...+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567899999999999999999864 6899999999765432 2345689999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC---CCCCeEEccccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAK 453 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~---~~~~~kl~Dfgla~ 453 (540)
|||+++|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||++ +++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999875 34699999999999999999999999 999999999999998 46789999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 7654332 23345699999999999998999999999999999999999999964
No 69
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.2e-37 Score=305.46 Aligned_cols=202 Identities=25% Similarity=0.437 Sum_probs=175.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
..++|.+.+.||+|+||.||+|.+.++..||+|+++... ....++.+|++++.+++||||+++++++...+..++|||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 346788889999999999999999888999999998654 234679999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 100 YMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred ccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 99999999999753 34589999999999999999999999 9999999999999999999999999999866543
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
.........+|+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 2222233447788999999998899999999999999999998 9999974
No 70
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=9.9e-38 Score=310.62 Aligned_cols=207 Identities=31% Similarity=0.426 Sum_probs=179.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEe------CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.++|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+|++++.+++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 56788899999999999999986 245889999998655444556799999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhccccCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 009208 374 LLVYPYMPNGSVASRLRDHIH--------------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~ 433 (540)
++||||+++|+|.+++..... ....+++..+..++.|+++||.|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999976432 123589999999999999999999999 999999999
Q ss_pred CceeeCCCCCeEEcccccccccCCCCCce-eeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCcc
Q 009208 434 ANILLDEDFEAVVGDFGLAKLLDHRDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (540)
Q Consensus 434 ~NILl~~~~~~kl~Dfgla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~~ 509 (540)
+||++++++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999998765433222 223447889999999998889999999999999999999 99999743
No 71
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-37 Score=312.68 Aligned_cols=200 Identities=22% Similarity=0.324 Sum_probs=176.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|++++.+++||||+++++++...+..++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 467899999999999999999975 68999999987543 2334578999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--CCCeEEcccccccccC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--DFEAVVGDFGLAKLLD 456 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~--~~~~kl~Dfgla~~~~ 456 (540)
|+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 99999999988642 34689999999999999999999999 9999999999999974 5689999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 203 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 252 (387)
T 1kob_A 203 PDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252 (387)
T ss_dssp TTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence 4332 2334699999999999998999999999999999999999999974
No 72
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=318.51 Aligned_cols=206 Identities=31% Similarity=0.401 Sum_probs=177.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.++|.+.+.||+|+||.||+|.+. +++.||||+++.........++.+|+.++.+++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356888899999999999999953 46789999997665555666899999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhccccC---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEc
Q 009208 374 LLVYPYMPNGSVASRLRDHI---HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---EAVVG 447 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~ 447 (540)
++||||+++|+|.+++.... .....+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997643 2234699999999999999999999999 999999999999999554 59999
Q ss_pred ccccccccCCC-CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 448 DFGLAKLLDHR-DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 448 Dfgla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999754321 1122334558999999999999999999999999999999998 9999974
No 73
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.8e-37 Score=303.96 Aligned_cols=203 Identities=24% Similarity=0.377 Sum_probs=164.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCC----CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
.++|.+.+.||+|+||.||+|.... +..||+|+++..........+.+|+.++.+++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578888999999999999998743 45799999876554455567999999999999999999999984 567899
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccccc
Confidence 99999999999999753 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCcc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~~ 509 (540)
............+|+.|+|||.+....++.++||||||+++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 5443333334457889999999998899999999999999999997 99999743
No 74
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.9e-37 Score=308.82 Aligned_cols=199 Identities=19% Similarity=0.200 Sum_probs=174.8
Q ss_pred cCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
++|.+.+.||+|+||.||+|.. .+|+.||||.+..... ...+.+|++++.++ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5788899999999999999996 4789999999875432 23588999999999 99999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-----eEEccccccc
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-----AVVGDFGLAK 453 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~Dfgla~ 453 (540)
|+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999999753 35799999999999999999999999 9999999999999998887 9999999998
Q ss_pred ccCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 454 LLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 454 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~ 220 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL 220 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence 76543221 123456999999999999999999999999999999999999999854
No 75
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=315.75 Aligned_cols=206 Identities=31% Similarity=0.419 Sum_probs=179.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC--------CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTE 370 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 370 (540)
.++|.+.+.||+|+||.||+|... .+..||||+++.........++.+|++++.++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888899999999999999852 34679999998765555556799999999999 899999999999999
Q ss_pred CeeEEEEecCCCCChhhhccccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 009208 371 NERLLVYPYMPNGSVASRLRDHIH------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (540)
Q Consensus 371 ~~~~lV~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 438 (540)
+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999976431 124699999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccCCCCC-ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 439 DEDFEAVVGDFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
++++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999987654322 22334457899999999999999999999999999999999 9999974
No 76
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=9.8e-38 Score=312.13 Aligned_cols=201 Identities=31% Similarity=0.443 Sum_probs=171.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC----eeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN----ERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~l 375 (540)
.++|++.+.||+|+||.||+|.+. ++.||||+++... .....+..|+.++.+++||||+++++++.... ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 467889999999999999999884 8999999986542 23345677999999999999999999997644 3699
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEecCCCCCceeeCCCCCeEEcc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ-------CDPKIIHRDVKAANILLDEDFEAVVGD 448 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------~~~~ivH~Dlk~~NILl~~~~~~kl~D 448 (540)
||||+++|+|.++++. ..+++..+..++.|+++||+|||+. +.++|+||||||+|||++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999975 3589999999999999999999975 244899999999999999999999999
Q ss_pred cccccccCCCCCc-eeecccccccccccccccc-----CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 449 FGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 449 fgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 240 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSS
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence 9999876543322 2233569999999999876 3567789999999999999999999974
No 77
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-36 Score=304.75 Aligned_cols=193 Identities=23% Similarity=0.377 Sum_probs=152.4
Q ss_pred CCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CCCccceeEEEecCCeeEEEEecCCCC
Q 009208 306 KNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNG 383 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~~~~g 383 (540)
.+.||+|+||.||+|... +++.||||++... ....+.+|++++..+. ||||+++++++.+.+..++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999985 5899999998653 3457889999999997 999999999999999999999999999
Q ss_pred ChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEcccccccccCCCCC
Q 009208 384 SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---EAVVGDFGLAKLLDHRDS 460 (540)
Q Consensus 384 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~Dfgla~~~~~~~~ 460 (540)
+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 92 ~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 163 (325)
T 3kn6_A 92 ELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN- 163 (325)
T ss_dssp BHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-
Confidence 99999975 35699999999999999999999999 999999999999998665 89999999998655432
Q ss_pred ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 461 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 461 ~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 22334568999999999999999999999999999999999999998543
No 78
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.1e-38 Score=328.98 Aligned_cols=204 Identities=25% Similarity=0.440 Sum_probs=177.4
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
+...++|.+.+.||+|+||.||+|.++++..||||+++... ....+|.+|++++.+++||||+++++++. .+..++|
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 34567788899999999999999999889999999998643 34668999999999999999999999986 5678999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.++++... ...+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++...
T Consensus 261 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp ECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999997531 23578899999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
...........+|+.|+|||++....++.++|||||||++|||+| |+.||..
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 322222223346789999999998999999999999999999999 9999974
No 79
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.6e-38 Score=310.97 Aligned_cols=203 Identities=25% Similarity=0.352 Sum_probs=168.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccc--cHHHHHHHHHHHhcccCCCccceeEEEecCCe----
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENE---- 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 372 (540)
.++|.+.+.||+|+||.||+|.. .+++.||||+++...... ....+.+|++++.+++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46788999999999999999996 578999999997654322 23468999999999999999999999876543
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 39999999999999999753 4689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc--eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 453 KLLDHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 453 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 222 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 866543222 223456899999999999999999999999999999999999999743
No 80
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-37 Score=313.52 Aligned_cols=210 Identities=27% Similarity=0.391 Sum_probs=176.9
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEe------CCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEec
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCST 369 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 369 (540)
+...++|.+.+.||+|+||.||+|.. .++..||||.++..........+.+|++++.++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 33467889999999999999999986 245689999998654444456799999999999 89999999999999
Q ss_pred CCeeEEEEecCCCCChhhhccccCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIHG-------------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRD 430 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~D 430 (540)
.+..++||||+++|+|.+++...... ...+++..+..++.|+++||.|||+. +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999764211 13489999999999999999999999 999999
Q ss_pred CCCCceeeCCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 431 VKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 431 lk~~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
|||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999866543322 2334557889999999999999999999999999999998 9999974
Q ss_pred c
Q 009208 509 G 509 (540)
Q Consensus 509 ~ 509 (540)
.
T Consensus 278 ~ 278 (344)
T 1rjb_A 278 I 278 (344)
T ss_dssp C
T ss_pred C
Confidence 3
No 81
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.1e-37 Score=325.78 Aligned_cols=201 Identities=25% Similarity=0.312 Sum_probs=167.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC--ccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN--IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +|+.||||+++... .......+.+|++++..++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 457888999999999999999975 68999999997542 122334678999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE-QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999998753 468999999999999999999998 7 9999999999999999999999999999854
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 3322 223446799999999999999999999999999999999999999974
No 82
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.3e-37 Score=327.25 Aligned_cols=204 Identities=29% Similarity=0.449 Sum_probs=179.6
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCC-CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
..++|.+.+.||+|+||.||+|.+.. +..||||.++... ....+|.+|++++.+++||||++++++|...+..++||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 34668888999999999999999864 8899999997653 34568999999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.++++.. ....+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 296 E~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 296 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp ECCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999753 235689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCcc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~~ 509 (540)
..........+++.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 33222333446789999999998999999999999999999999 99999743
No 83
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.6e-37 Score=301.22 Aligned_cols=199 Identities=22% Similarity=0.325 Sum_probs=171.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
++|.+.+.||+|+||.||+|... +++.||+|+++...... ....+.+|++++.+++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888999999999999999985 58999999997654333 34578899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++ ++.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 555555432 35699999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeeccccccccccccccccCC-CCccCCeehhhHHHHHHHhCCCCCC
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
.. ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~ 203 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSC
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCc
Confidence 22 233456899999999997765 7999999999999999999998864
No 84
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.3e-37 Score=310.13 Aligned_cols=201 Identities=27% Similarity=0.493 Sum_probs=167.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCc----EEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
++|...+.||+|+||.||+|.+. +++ +||+|.++.........++.+|++++.+++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888899999999999999964 343 468888876555556678999999999999999999999998754 789
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
|+||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 94 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 99999999999999763 35699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 456 DHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
...... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||+.
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 222 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccC
Confidence 543322 2233457889999999999999999999999999999999 9999974
No 85
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.9e-38 Score=317.49 Aligned_cols=203 Identities=27% Similarity=0.365 Sum_probs=174.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEe----CCCcEEEEEEeccCCc---cccHHHHHHHHHHHhcc-cCCCccceeEEEecCC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF----SDGALVAVKRLKDYNI---AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTEN 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 371 (540)
.++|.+.+.||+|+||.||+|.. .+++.||||+++.... ......+.+|++++..+ .||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999997 3689999999875432 12234577899999999 5999999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
..++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 999999999999999999753 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccccccccccc--CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 98665433333445679999999999975 34789999999999999999999999743
No 86
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-37 Score=302.27 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=173.9
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
++|.+.+.||+|+||.||++... ++..||+|++...........+.+|++++.+++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56888999999999999999975 68999999998766555667899999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEcccccccccC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~~~~ 456 (540)
+++|+|.+++.........+++..+..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 999999999875433346799999999999999999999999 99999999999999 456789999999998655
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||++. ..++.++||||||+++|||++|+.||..
T Consensus 179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~ 227 (285)
T 3is5_A 179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence 432 233456999999999875 5689999999999999999999999974
No 87
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=8.7e-37 Score=314.14 Aligned_cols=198 Identities=24% Similarity=0.336 Sum_probs=162.6
Q ss_pred cCCCcC-CeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHh-cccCCCccceeEEEec----CCee
Q 009208 301 SNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETIS-LAVHRNLLRLCGFCST----ENER 373 (540)
Q Consensus 301 ~~~~~~-~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~----~~~~ 373 (540)
++|.+. +.||+|+||.||+|... +|+.||||+++.. ..+.+|++++. ..+||||+++++++.. .+..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 455554 68999999999999975 6899999998642 35678888874 4589999999998865 5678
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEcccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFG 450 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~Dfg 450 (540)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 9999999999999999753 234699999999999999999999999 9999999999999997 7899999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcccc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~~ 511 (540)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 268 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 268 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc
Confidence 998654322 22345689999999999999999999999999999999999999975443
No 88
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-36 Score=312.48 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=162.6
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC-ccccHHHHHHHHHHHhccc-CCCccceeEEEecCC--ee
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN-IAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTEN--ER 373 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~--~~ 373 (540)
..++|.+.+.||+|+||.||+|... +|+.||||++.... ......++.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999874 68999999986532 2233456889999999997 999999999997544 68
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||++ |+|.++++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 87 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 99999997 588888864 3688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC--------------------CCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 454 LLDHR--------------------DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 454 ~~~~~--------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.+... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 65321 1112234569999999999876 67899999999999999999999999754
No 89
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.5e-37 Score=310.06 Aligned_cols=197 Identities=27% Similarity=0.389 Sum_probs=160.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.+.|.+.+.||+|+||.||+|... +++.||||+++... ....+.+|++++.+++||||+++++++...+..++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 467888999999999999999986 57899999997543 34568899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEccccccccc
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFGLAKLL 455 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~Dfgla~~~ 455 (540)
|+++|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999998864 34689999999999999999999999 9999999999999975 889999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 4322 22345699999999999998999999999999999999999999974
No 90
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.1e-36 Score=302.31 Aligned_cols=200 Identities=33% Similarity=0.497 Sum_probs=167.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|.+. ..+|+|.++..... .....+.+|++++.+++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467888999999999999999874 46999998764432 23457899999999999999999999875 456889999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 99999999998643 45799999999999999999999999 9999999999999999999999999999865432
Q ss_pred -CCceeeccccccccccccccc---cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 -DSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 -~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.........||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~ 239 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 122233456999999999986 56688999999999999999999999974
No 91
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=312.04 Aligned_cols=195 Identities=26% Similarity=0.353 Sum_probs=167.2
Q ss_pred CCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEecCCCCC
Q 009208 306 KNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGS 384 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 384 (540)
.+.||+|+||.||+|... +|+.||+|+++... .....++.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 568999999999999874 68999999998654 2345579999999999999999999999999999999999999999
Q ss_pred hhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee--CCCCCeEEcccccccccCCCCCce
Q 009208 385 VASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL--DEDFEAVVGDFGLAKLLDHRDSHV 462 (540)
Q Consensus 385 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl--~~~~~~kl~Dfgla~~~~~~~~~~ 462 (540)
|.+++.+. ...+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 173 L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 173 LFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp EHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 99988642 34689999999999999999999999 99999999999999 5678999999999987654332
Q ss_pred eeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 463 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.....||+.|+|||++....++.++|||||||++|||++|+.||...
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 291 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 23345999999999999889999999999999999999999999743
No 92
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=301.75 Aligned_cols=197 Identities=27% Similarity=0.280 Sum_probs=166.4
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|+..+.||+|+||+||+|... +|+.||||++..... .....++..|+..+.++ +||||+++++++...+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57899999999999999999986 699999999865432 22333556666666555 8999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+ +++|.+++... ...++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++.....
T Consensus 137 e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp ECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred ecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 999 77999988754 34699999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|+.|+.
T Consensus 210 ~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 210 AG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred CC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 32 2334459999999999875 78999999999999999999977765
No 93
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.7e-37 Score=310.07 Aligned_cols=209 Identities=26% Similarity=0.309 Sum_probs=172.9
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC----ccccHHHHHHHHHHHhcccCCCccceeEEEecCC
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN----IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 371 (540)
....++|.+.+.||+|+||.||+|... +++.||+|+++... .......+.+|++++.+++||||+++++++...+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 445678999999999999999999974 68899999986532 1334567999999999999999999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCC------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHG------------------------------------RPALDWARRKRIALGTARGL 415 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~~l 415 (540)
..++||||+++|+|.+++...... ...+++..+..++.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998632111 12346778889999999999
Q ss_pred HHHHhcCCCCeEecCCCCCceeeCCCC--CeEEcccccccccCCCC---Cceeecccccccccccccccc--CCCCccCC
Q 009208 416 LYLHEQCDPKIIHRDVKAANILLDEDF--EAVVGDFGLAKLLDHRD---SHVTTAVRGTVGHIAPEYLST--GQSSEKTD 488 (540)
Q Consensus 416 ~~LH~~~~~~ivH~Dlk~~NILl~~~~--~~kl~Dfgla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~--~~~~~k~D 488 (540)
+|||+. +|+||||||+||+++.++ .+||+|||+++.+.... ........||+.|+|||++.. ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 89999999998654321 112344569999999999865 67899999
Q ss_pred eehhhHHHHHHHhCCCCCCc
Q 009208 489 VFGFGILLLELITGQRALDF 508 (540)
Q Consensus 489 v~S~Gvil~elltg~~p~~~ 508 (540)
|||||+++|||++|+.||..
T Consensus 259 iwslG~il~el~~g~~pf~~ 278 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPG 278 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCC
T ss_pred HHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999974
No 94
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7.8e-37 Score=302.24 Aligned_cols=196 Identities=29% Similarity=0.434 Sum_probs=166.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhc--ccCCCccceeEEEec----CCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCGFCST----ENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~----~~~~ 373 (540)
.++|.+.+.||+|+||.||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46788999999999999999998 7899999998653 34456677777765 799999999998654 3457
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceeeCCCCCeE
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--------EQCDPKIIHRDVKAANILLDEDFEAV 445 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NILl~~~~~~k 445 (540)
++||||+++|+|.++++. ..+++..+..++.|+++||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 899999999999999953 36999999999999999999999 66 999999999999999999999
Q ss_pred EcccccccccCCCCCce---eeccccccccccccccccC------CCCccCCeehhhHHHHHHHhC----------CCCC
Q 009208 446 VGDFGLAKLLDHRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----------QRAL 506 (540)
Q Consensus 446 l~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvil~elltg----------~~p~ 506 (540)
|+|||+++......... .....||+.|+|||++.+. .+++++||||||+++|||+|| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998665443322 1234699999999999876 456799999999999999999 8888
Q ss_pred Cc
Q 009208 507 DF 508 (540)
Q Consensus 507 ~~ 508 (540)
..
T Consensus 234 ~~ 235 (301)
T 3q4u_A 234 YD 235 (301)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 95
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7e-37 Score=320.36 Aligned_cols=199 Identities=27% Similarity=0.446 Sum_probs=176.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999975 799999999975432 123457899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.+++.+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999864 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.. ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.
T Consensus 169 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 169 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp TC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 32 2334569999999999988765 7899999999999999999999974
No 96
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.5e-37 Score=298.54 Aligned_cols=201 Identities=28% Similarity=0.463 Sum_probs=177.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
.++|.+.+.||+|+||.||+|...+++.||+|+++... ....++.+|++++.+++||||+++++++..++..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 35688889999999999999999889999999998654 2346799999999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp CTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 9999999999753 34689999999999999999999999 99999999999999999999999999998664322
Q ss_pred CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
........+++.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 222233457789999999998899999999999999999999 8999974
No 97
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.9e-37 Score=321.95 Aligned_cols=202 Identities=30% Similarity=0.453 Sum_probs=170.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
..++|.+.+.||+|+||.||+|.+.++..||||+++... ....+|.+|++++.+++||||+++++++.. +..++|||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 346688889999999999999999888889999998654 235679999999999999999999999876 67899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.++++... ...+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 259 ~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 259 YMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 999999999997531 24589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
.........+++.|+|||.+....++.++||||||+++|||+| |+.||..
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 3222334457889999999999999999999999999999999 9999974
No 98
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.3e-36 Score=295.06 Aligned_cols=203 Identities=26% Similarity=0.397 Sum_probs=178.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... +++.||+|+++..........+.+|++++..++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457888999999999999999975 6899999999765545556789999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 86 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999998864 35689999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-ceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DS-HVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. .......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||+..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 211 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP 211 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCS
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCC
Confidence 21 12234568999999999987665 78999999999999999999999753
No 99
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.1e-37 Score=303.87 Aligned_cols=206 Identities=29% Similarity=0.401 Sum_probs=179.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEe------CCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 372 (540)
.++|.+.+.||+|+||.||+|.+ .+++.||+|+++..........+.+|++++.++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788899999999999999985 356899999998665444556799999999999 99999999999999999
Q ss_pred eEEEEecCCCCChhhhccccCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 009208 373 RLLVYPYMPNGSVASRLRDHIH--------------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 438 (540)
.++||||+++|+|.+++..... ....+++..+..++.|+++||.|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999976421 123589999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 439 DEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
++++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 250 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999876544332 2234457889999999999999999999999999999999 9999974
No 100
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-36 Score=310.43 Aligned_cols=204 Identities=21% Similarity=0.284 Sum_probs=175.9
Q ss_pred hcCCCcCCeeeec--cCccEEEEEeC-CCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 300 TSNFSAKNILGRG--GFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
..+|.+.+.||+| +||.||+|... +|+.||||+++...... ....+.+|++++++++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4568889999999 99999999986 68999999997654322 23468889999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999997632 34589999999999999999999999 9999999999999999999999999988654
Q ss_pred CCCC------Cceeecccccccccccccccc--CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRD------SHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~------~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 2211 111122358999999999987 5789999999999999999999999974
No 101
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=297.16 Aligned_cols=203 Identities=27% Similarity=0.450 Sum_probs=157.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||+|.+..... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35688899999999999999997 4789999999865321 22345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999998753 35689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 164 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 164 MPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 3322 223346899999999999888999999999999999999999999753
No 102
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.8e-36 Score=307.56 Aligned_cols=199 Identities=24% Similarity=0.298 Sum_probs=165.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||++... +++.||||++..... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 467889999999999999999986 689999999976432 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--eEEcccccccccC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE--AVVGDFGLAKLLD 456 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~Dfgla~~~~ 456 (540)
|+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++...
T Consensus 97 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 97 YASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred eCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 99999999998653 4689999999999999999999999 9999999999999987765 9999999997433
Q ss_pred CCCCceeeccccccccccccccccCCCCcc-CCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k-~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
... ......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...
T Consensus 170 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (361)
T 3uc3_A 170 LHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred ccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence 221 2234469999999999988877655 89999999999999999999743
No 103
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.2e-36 Score=302.17 Aligned_cols=200 Identities=23% Similarity=0.332 Sum_probs=177.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-----cHHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|.++...... ...++.+|++++.+++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356889999999999999999975 68999999997654322 356799999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDF 449 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~Df 449 (540)
++||||+++++|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999975 34689999999999999999999999 999999999999999887 7999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|++........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 99987654322 2344699999999999988999999999999999999999999974
No 104
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.4e-36 Score=305.23 Aligned_cols=206 Identities=30% Similarity=0.441 Sum_probs=177.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC--------CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTE 370 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 370 (540)
.++|.+.+.||+|+||.||+|... ++..||+|+++.........++.+|++++.++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467889999999999999999863 46789999998665445556799999999999 899999999999999
Q ss_pred CeeEEEEecCCCCChhhhccccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 009208 371 NERLLVYPYMPNGSVASRLRDHIHG------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (540)
Q Consensus 371 ~~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 438 (540)
+..++||||+++|+|.+++...... ...+++..+..++.|+++||.|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999764221 23489999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 439 DEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
+.++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 99999999999999876543322 1233457889999999988889999999999999999999 9999974
No 105
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.7e-37 Score=302.63 Aligned_cols=203 Identities=30% Similarity=0.463 Sum_probs=181.2
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCC-CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
..++|.+.+.||+|+||.||+|.... +..||+|.++... ....++.+|++++.+++||||+++++++...+..++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 45778889999999999999999864 8899999997543 34567999999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++++|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 89 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp ECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999753 345689999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
..........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 54444455567889999999998999999999999999999999 9999974
No 106
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.9e-37 Score=303.73 Aligned_cols=202 Identities=29% Similarity=0.493 Sum_probs=170.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-----CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEec--CCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST--ENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~ 372 (540)
.++|++.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++.+++||||+++++++.. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 35688889999999999999984 368899999987543 3334578999999999999999999999864 355
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred eEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 89999999999999999763 23589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc--eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 453 KLLDHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 453 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
+........ ......++..|+|||.+.+..++.++||||||+++|||+||..|+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 876543221 22334477889999999999999999999999999999999999874
No 107
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=308.94 Aligned_cols=202 Identities=27% Similarity=0.387 Sum_probs=166.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEec
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~ 379 (540)
++|.+.+.||+|+||.||+|... +++.||+|+++..........+.+|++++.+++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999986 68999999997544332222456899999999999999999999999999999999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCC
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~ 459 (540)
++ |+|.+++... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 5898888753 34689999999999999999999999 99999999999999999999999999998654332
Q ss_pred Cceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 460 SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 2 2233458999999999876 568999999999999999999999997543
No 108
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.6e-37 Score=311.31 Aligned_cols=196 Identities=22% Similarity=0.344 Sum_probs=170.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||++..+ +|+.||+|+++.... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999975 589999999976432 235688888877 7999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-C---CeEEccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-F---EAVVGDFGLAK 453 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-~---~~kl~Dfgla~ 453 (540)
||+++|+|.+++.+ ...+++..+..++.|++.||+|||+. +|+||||||+|||+.++ + .+||+|||+++
T Consensus 96 E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 96 ELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999998865 34689999999999999999999999 99999999999998533 3 59999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 169 QLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp ECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 7654332 23345689999999999888899999999999999999999999974
No 109
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.7e-36 Score=317.03 Aligned_cols=196 Identities=33% Similarity=0.478 Sum_probs=171.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC-eeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN-ERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|.+ .|+.||||+++... ....|.+|++++.+++||||+++++++...+ ..++|||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 46788889999999999999998 47899999998643 3457999999999999999999999987665 7899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.++++.. ....+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999864 233478999999999999999999999 9999999999999999999999999999854322
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
.....+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 389 (450)
T 1k9a_A 343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 122357889999999999999999999999999999998 9999974
No 110
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.4e-37 Score=307.77 Aligned_cols=201 Identities=29% Similarity=0.492 Sum_probs=170.2
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCc----EEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
++|.+.+.||+|+||.||+|.+. +++ .||+|.+...........+.+|+.++.+++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56788899999999999999974 344 388888765443333446788999999999999999999986 456889
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 99999999999999753 34688999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 456 DHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
...... ......||+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 220 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccc
Confidence 544322 2344557889999999999999999999999999999999 9999974
No 111
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.2e-36 Score=300.49 Aligned_cols=203 Identities=23% Similarity=0.300 Sum_probs=167.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc--cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +++.||+|+++...... ....+.+|++++.+++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 477899999999999999999975 68899999997653322 235789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 9999999999999753 4689999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
...........||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 44333334456999999999999989999999999999999999999999743
No 112
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.2e-37 Score=334.14 Aligned_cols=203 Identities=26% Similarity=0.335 Sum_probs=177.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC--ccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN--IAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 374 (540)
..++|.+.+.||+|+||.||+|... +++.||||+++... .......+..|.+++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999975 58899999997532 123344678899999887 7999999999999999999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 419 lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 999999999999999763 4699999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 492 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~ 545 (674)
T 3pfq_A 492 NIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545 (674)
T ss_dssp CCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC
Confidence 43322 2344567999999999999999999999999999999999999999743
No 113
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.3e-37 Score=309.65 Aligned_cols=210 Identities=28% Similarity=0.388 Sum_probs=179.8
Q ss_pred HHHHhcCCCcCCeeeeccCccEEEEEeCC------CcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEe
Q 009208 296 LRAATSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCS 368 (540)
Q Consensus 296 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 368 (540)
++...++|.+.+.||+|+||.||+|.... +..||+|.++..........+.+|++++.++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 33456789999999999999999999642 3489999998765445566799999999999 8999999999999
Q ss_pred cCCeeEEEEecCCCCChhhhccccCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 009208 369 TENERLLVYPYMPNGSVASRLRDHIH----------GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL 438 (540)
Q Consensus 369 ~~~~~~lV~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl 438 (540)
..+..++||||+++|+|.+++..... ....+++..+..++.|+++||.|||+. +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999875311 134589999999999999999999999 99999999999999
Q ss_pred CCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 439 DEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 439 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
++++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 269 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcc
Confidence 99999999999999865433322 2234457889999999998899999999999999999999 9999974
No 114
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5e-37 Score=300.40 Aligned_cols=202 Identities=30% Similarity=0.485 Sum_probs=175.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
..++|.+.+.||+|+||.||+|...++..||+|.++... .....+.+|++++.+++||||+++++++. .+..++|||
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 346788899999999999999999888899999997643 33567999999999999999999999986 456899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++... ....+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 88 ~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 88 YMENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp CCTTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred cCCCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 99999999998742 112589999999999999999999999 9999999999999999999999999999876644
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 3333334457889999999988889999999999999999999 9999974
No 115
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-36 Score=308.57 Aligned_cols=209 Identities=21% Similarity=0.259 Sum_probs=180.7
Q ss_pred cccCHHHHHHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhccc-----CCCccc
Q 009208 289 KRYTFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-----HRNLLR 362 (540)
Q Consensus 289 ~~~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv~ 362 (540)
..+++.+.....++|.+.+.||+|+||.||+|... +++.||||+++.. ......+..|++++..+. ||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44555555556789999999999999999999974 6899999998743 233446788999999886 999999
Q ss_pred eeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--
Q 009208 363 LCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-- 440 (540)
Q Consensus 363 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-- 440 (540)
+++++...+..++||||+ +++|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+|||+++
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRN--NYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 999999999999999999 99999999763 234589999999999999999999999 9999999999999975
Q ss_pred -----------------------CCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHH
Q 009208 441 -----------------------DFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLL 497 (540)
Q Consensus 441 -----------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ 497 (540)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 789999999999865432 23456899999999999999999999999999999
Q ss_pred HHHhCCCCCCcc
Q 009208 498 ELITGQRALDFG 509 (540)
Q Consensus 498 elltg~~p~~~~ 509 (540)
||++|+.||...
T Consensus 251 ell~g~~pf~~~ 262 (360)
T 3llt_A 251 ELYTGSLLFRTH 262 (360)
T ss_dssp HHHHSSCSCCCS
T ss_pred HHHHCCCCCCCC
Confidence 999999999743
No 116
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-36 Score=297.84 Aligned_cols=202 Identities=23% Similarity=0.415 Sum_probs=171.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCC----CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
.++|.+.+.||+|+||.||+|.+.+ +..||+|.++..........+.+|++++.+++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678888999999999999998643 346999999876545556789999999999999999999999864 45689
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 90 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 99999999999999753 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 5443333344557889999999998899999999999999999998 9999964
No 117
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=300.45 Aligned_cols=202 Identities=24% Similarity=0.308 Sum_probs=170.4
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
++|.+.+.||+|+||.||+|... +|+.||+|++....... ....+.+|++++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999985 58999999987654322 24568899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 9999999888764 34689999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
.. ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 207 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 22 2234468999999999876 568999999999999999999999997543
No 118
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.3e-36 Score=300.87 Aligned_cols=201 Identities=27% Similarity=0.452 Sum_probs=173.2
Q ss_pred cCCCcCCeeeeccCccEEEEEe-----CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC--Cee
Q 009208 301 SNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NER 373 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 373 (540)
..|.+.+.||+|+||.||+|.+ .+++.||+|+++..........+.+|++++.+++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4577889999999999999984 368999999998665555667899999999999999999999999876 668
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccc
Confidence 9999999999999999653 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc--eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 454 LLDHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 454 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
........ ......||..|+|||++.+..++.++||||||+++|||+||+.|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 77654332 2234458889999999999999999999999999999999999875
No 119
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.9e-36 Score=293.71 Aligned_cols=198 Identities=22% Similarity=0.337 Sum_probs=174.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... ++..||+|++.... ......+.+|++++.+++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 456888999999999999999975 47899999987654 2345679999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEccccccccc
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~~~ 455 (540)
|+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVHK----RVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 99999999988753 4689999999999999999999999 99999999999999 78899999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (277)
T 3f3z_A 160 KPGK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA 209 (277)
T ss_dssp CTTS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCcc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCC
Confidence 5433 22344699999999998654 89999999999999999999999974
No 120
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=312.71 Aligned_cols=202 Identities=21% Similarity=0.338 Sum_probs=175.6
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC--eeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN--ERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lV~ 377 (540)
++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++.+++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888899999999999999986 489999999987655556677899999999999999999999998655 679999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL----DEDFEAVVGDFGLAK 453 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~Dfgla~ 453 (540)
||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 89 e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp CCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred ecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 9999999999997642 223489999999999999999999999 99999999999999 777889999999998
Q ss_pred ccCCCCCceeecccccccccccccccc--------CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLST--------GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
...... ......||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 165 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 165 ELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp ECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred EccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 765432 2234569999999999865 5678899999999999999999999974
No 121
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=305.87 Aligned_cols=201 Identities=24% Similarity=0.333 Sum_probs=175.6
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-------cHHHHHHHHHHHhcccCCCccceeEEEecC
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-------GEVQFQTEVETISLAVHRNLLRLCGFCSTE 370 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 370 (540)
..++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++.+++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467899999999999999999864 68999999997653211 223577899999999999999999999999
Q ss_pred CeeEEEEecCCCC-ChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccc
Q 009208 371 NERLLVYPYMPNG-SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (540)
Q Consensus 371 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 449 (540)
+..++||||+.+| +|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999877 99998875 34699999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|++........ .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 99987654332 234569999999999988776 8899999999999999999999974
No 122
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=298.39 Aligned_cols=203 Identities=28% Similarity=0.377 Sum_probs=170.7
Q ss_pred HhcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCc----cccHHHHHHHHHHHhccc---CCCccceeEEEecC
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI----AGGEVQFQTEVETISLAV---HRNLLRLCGFCSTE 370 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~ 370 (540)
..++|.+.+.||+|+||.||+|.. .+++.||+|+++.... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999996 4689999999874321 112345677888877665 99999999999765
Q ss_pred C-----eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 009208 371 N-----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (540)
Q Consensus 371 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~k 445 (540)
. ..++||||+. |+|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKA--PPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTC--CTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4789999997 6999998753 234499999999999999999999999 999999999999999999999
Q ss_pred EcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 446 VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 446 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 161 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 222 (308)
T 3g33_A 161 LADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222 (308)
T ss_dssp ECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCS
T ss_pred EeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999998665332 234456899999999999999999999999999999999999999743
No 123
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.8e-37 Score=303.70 Aligned_cols=215 Identities=26% Similarity=0.372 Sum_probs=182.8
Q ss_pred cCHHHHHHHhcCCCcCCeeeeccCccEEEEEe------CCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccce
Q 009208 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRL 363 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l 363 (540)
+...++....++|.+.+.||+|+||.||+|.+ .+++.||||+++..........+.+|++++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44455556678899999999999999999984 356899999998765444556799999999999 68999999
Q ss_pred eEEEecCC-eeEEEEecCCCCChhhhccccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 009208 364 CGFCSTEN-ERLLVYPYMPNGSVASRLRDHIHG------------RPALDWARRKRIALGTARGLLYLHEQCDPKIIHRD 430 (540)
Q Consensus 364 ~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~D 430 (540)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|+++||.|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987655 489999999999999999764221 22388999999999999999999999 999999
Q ss_pred CCCCceeeCCCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 431 VKAANILLDEDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 431 lk~~NILl~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
|||+||+++.++.+||+|||+++........ ......||+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999866543322 2334558899999999999999999999999999999998 9999974
No 124
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=5.3e-36 Score=295.81 Aligned_cols=200 Identities=18% Similarity=0.228 Sum_probs=174.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.... ...+.+|++++..+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35688899999999999999996 5789999999875432 23578899999998 7999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-----eEEcccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-----AVVGDFGLA 452 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~Dfgla 452 (540)
||+ +++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 86 e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 86 DLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred Eec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999 99999999753 34699999999999999999999999 9999999999999987776 999999999
Q ss_pred cccCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 453 KLLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 453 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 221 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 221 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence 876543321 223456999999999999999999999999999999999999999853
No 125
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.7e-36 Score=303.24 Aligned_cols=208 Identities=27% Similarity=0.403 Sum_probs=161.5
Q ss_pred HHhcCCCcCCeeeeccCccEEEEEeCCC----cEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCe
Q 009208 298 AATSNFSAKNILGRGGFGIVYKGCFSDG----ALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (540)
Q Consensus 298 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~g----~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 372 (540)
...++|.+.+.||+|+||.||+|..... ..||||+++.... .....++.+|++++.+++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 3456799999999999999999997543 2799999976432 2335679999999999999999999999987765
Q ss_pred e------EEEEecCCCCChhhhccccCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 009208 373 R------LLVYPYMPNGSVASRLRDHIH--GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEA 444 (540)
Q Consensus 373 ~------~lV~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 444 (540)
. ++||||+++|+|.+++..... ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999865322 223589999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 445 VVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 242 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAG 242 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 99999999866443221 2223447889999999999999999999999999999999 9999974
No 126
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.8e-36 Score=293.55 Aligned_cols=198 Identities=23% Similarity=0.412 Sum_probs=153.1
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|.+.+.||+|+||.||+|... +|+.||+|+++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57889999999999999999864 689999999976432 233557899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+ ++++.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 6788887764 34689999999999999999999999 999999999999999999999999999986554
Q ss_pred CCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||+.
T Consensus 165 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (275)
T 2eue_A 165 GNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 322 233458999999999987765 7899999999999999999999974
No 127
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.6e-36 Score=308.28 Aligned_cols=210 Identities=23% Similarity=0.287 Sum_probs=172.3
Q ss_pred cCHHHHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccc----------cHHHHHHHHHHHhcccCCCc
Q 009208 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG----------GEVQFQTEVETISLAVHRNL 360 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~nI 360 (540)
..+.++....++|.+.+.||+|+||.||+|...+|+.||||++....... ....+.+|++++.+++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34667888899999999999999999999998889999999986533221 12578999999999999999
Q ss_pred cceeEEEec-----CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 009208 361 LRLCGFCST-----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (540)
Q Consensus 361 v~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~N 435 (540)
+++++++.. ....++||||++ |+|.+++.. ....+++..+..++.|++.||.|||+. +|+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 999999843 335799999998 688888764 245699999999999999999999999 99999999999
Q ss_pred eeeCCCCCeEEcccccccccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 436 ILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 436 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
|+++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 237 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS 237 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCC
Confidence 999999999999999997544322 2234568999999999877 67899999999999999999999999853
No 128
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=7.4e-37 Score=305.55 Aligned_cols=214 Identities=26% Similarity=0.408 Sum_probs=182.2
Q ss_pred CHHHHHHHhcCCCcCCeeeeccCccEEEEEeC------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeE
Q 009208 292 TFKELRAATSNFSAKNILGRGGFGIVYKGCFS------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCG 365 (540)
Q Consensus 292 ~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~ 365 (540)
..++++...++|.+.+.||+|+||.||+|... +++.||+|.++.........++.+|++++.+++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33444556788999999999999999999864 368899999986654555567999999999999999999999
Q ss_pred EEecCCeeEEEEecCCCCChhhhccccC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC
Q 009208 366 FCSTENERLLVYPYMPNGSVASRLRDHI------HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD 439 (540)
Q Consensus 366 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~ 439 (540)
++...+..++||||+++|+|.+++.... .....+++..+..++.|+++||.|||+. +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 9999999999999999999999987521 1124578999999999999999999999 999999999999999
Q ss_pred CCCCeEEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 440 EDFEAVVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 440 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
+++.+||+|||+++........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 9999999999999865432221 1123346889999999998899999999999999999999 8999974
No 129
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.8e-36 Score=294.11 Aligned_cols=200 Identities=23% Similarity=0.369 Sum_probs=175.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|++...... .....+.+|++++.+++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467889999999999999999975 5899999999765432 23456889999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~Dfgla~~ 454 (540)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 999999999888753 4689999999999999999999999 9999999999999986655 99999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 158 ~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 158 VNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp CCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 654322 2345699999999999999999999999999999999999999964
No 130
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8e-36 Score=295.47 Aligned_cols=200 Identities=29% Similarity=0.404 Sum_probs=179.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.+.|...+.||+|+||.||+|... +++.||+|.++..........+.+|+.++..++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888899999999999999864 6899999999876655566789999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 9999999999863 4689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 173 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 173 QI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp BC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 22 22345689999999999999999999999999999999999999974
No 131
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.8e-36 Score=304.62 Aligned_cols=196 Identities=32% Similarity=0.432 Sum_probs=171.1
Q ss_pred cCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCcc--ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIA--GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
+.|...+.||+|+||.||+|.. .+|+.||||++...... ....++.+|++++.+++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4477889999999999999996 47899999999754322 22346899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||++ |++.+++... ...+++..+..++.|+++||.|||+. +|+||||||+|||+++++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 6888877543 35689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeccccccccccccccc---cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2 2346999999999984 56789999999999999999999999974
No 132
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.1e-36 Score=295.92 Aligned_cols=199 Identities=31% Similarity=0.476 Sum_probs=172.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467888999999999999999875 578999999865321 22345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp ECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 9999999999998753 4589999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 209 (279)
T 3fdn_A 161 SSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence 322 2344689999999999998999999999999999999999999974
No 133
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.2e-36 Score=292.97 Aligned_cols=197 Identities=32% Similarity=0.564 Sum_probs=169.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccH------HHHHHHHHHHhcccCCCccceeEEEecCCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGE------VQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 372 (540)
.++|.+.+.||+|+||.||+|... +++.||+|++......... ..+.+|++++.+++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888899999999999999974 7899999998754433222 57899999999999999999999986655
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCC-----eE
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFE-----AV 445 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlk~~NILl~~~~~-----~k 445 (540)
++||||+++|+|.+++.+. ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 6999999999999988653 45799999999999999999999998 7 999999999999988776 99
Q ss_pred EcccccccccCCCCCceeeccccccccccccccc--cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 446 VGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS--TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 446 l~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|+|||+++.... ......||+.|+|||++. ...++.++||||||+++|||++|+.||+.
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 230 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcc
Confidence 999999974332 234456999999999983 45578999999999999999999999974
No 134
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.6e-36 Score=296.65 Aligned_cols=201 Identities=24% Similarity=0.391 Sum_probs=177.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||++... +++.||+|.+..... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888899999999999999986 578999999875432 23345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 9999999999988653 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 217 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3322 22345689999999999988899999999999999999999999974
No 135
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.9e-37 Score=310.49 Aligned_cols=202 Identities=18% Similarity=0.224 Sum_probs=167.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCC------CcEEEEEEeccCCccc----------cHHHHHHHHHHHhcccCCCccce
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSD------GALVAVKRLKDYNIAG----------GEVQFQTEVETISLAVHRNLLRL 363 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l 363 (540)
.++|.+.+.||+|+||.||+|.+.. ++.||||++....... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999998864 4789999987543110 01124456666778889999999
Q ss_pred eEEEecC----CeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC
Q 009208 364 CGFCSTE----NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD 439 (540)
Q Consensus 364 ~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~ 439 (540)
++++... ...++||||+ +++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998764 4579999999 99999999753 35699999999999999999999999 999999999999999
Q ss_pred --CCCCeEEcccccccccCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 440 --EDFEAVVGDFGLAKLLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 440 --~~~~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 8899999999999866432211 11234599999999999999999999999999999999999999984
No 136
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.8e-36 Score=293.35 Aligned_cols=199 Identities=22% Similarity=0.345 Sum_probs=174.0
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-----ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-----GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
++|.+.+.||+|+||.||+|... +|+.||+|.++..... .....+.+|++++.+++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46888999999999999999986 6899999998764322 23567999999999999999999999999999999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEcccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF----EAVVGDFG 450 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~Dfg 450 (540)
+||||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 85 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999752 4689999999999999999999999 999999999999999877 89999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
++....... ......||+.|+|||++....++.++||||||+++|||++|+.||..
T Consensus 158 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 158 IAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 998765432 22344589999999999988999999999999999999999999974
No 137
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.5e-36 Score=302.55 Aligned_cols=201 Identities=24% Similarity=0.391 Sum_probs=177.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
..+|.+.+.||+|+||.||++... +++.||+|++..... ......+.+|+.++..++||||+++++++...+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888899999999999999985 478999999875432 23345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999999988653 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 243 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence 3322 23345689999999999988899999999999999999999999974
No 138
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.5e-36 Score=305.61 Aligned_cols=203 Identities=28% Similarity=0.401 Sum_probs=171.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEec--------
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCST-------- 369 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------- 369 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+|++++.+++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 35788999999999999999998 47899999998654432 234568899999999999999999999876
Q ss_pred CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccc
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 449 (540)
.+..++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccc
Confidence 3468999999975 777777543 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCC---Cceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 450 GLAKLLDHRD---SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 450 gla~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
|+++.+.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 232 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence 9998765322 112234568999999999876 45799999999999999999999999854
No 139
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.2e-36 Score=293.71 Aligned_cols=205 Identities=20% Similarity=0.247 Sum_probs=170.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEE-ecCCeeEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC-STENERLLV 376 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lV 376 (540)
..++|.+.+.||+|+||.||+|.. .+++.||||++...... .++.+|++++..++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 357899999999999999999996 57899999987654322 2578899999999998888777766 567788999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEccccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAK 453 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~ 453 (540)
|||+ +++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++ ++++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 99999998743 34699999999999999999999999 99999999999999 788999999999998
Q ss_pred ccCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcccccc
Q 009208 454 LLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRAAN 513 (540)
Q Consensus 454 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~~~~ 513 (540)
........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 222 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAAT 222 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSS
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhh
Confidence 76543321 1234569999999999999999999999999999999999999998644333
No 140
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=305.51 Aligned_cols=200 Identities=22% Similarity=0.309 Sum_probs=167.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccC--CCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVH--RNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV 376 (540)
.+.|.+.+.||+|+||.||++...+++.||||+++..... .....+.+|++++.+++| +||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 3568888999999999999999988999999998754422 233578999999999986 9999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|| +.+|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 568899999975 34689999999999999999999999 999999999999997 5789999999998765
Q ss_pred CCCCc-eeecccccccccccccccc-----------CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 43322 2334569999999999865 6789999999999999999999999973
No 141
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-36 Score=295.94 Aligned_cols=201 Identities=27% Similarity=0.424 Sum_probs=173.5
Q ss_pred cCCCcCC-eeeeccCccEEEEEeC---CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 301 SNFSAKN-ILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 301 ~~~~~~~-~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
++|.+.+ .||+|+||.||+|.+. ++..||||+++.........++.+|++++.+++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455555 8999999999999864 57889999998765445566799999999999999999999999 45668999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp EECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred EEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 9999999999998642 45699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcee--eccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 457 HRDSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 457 ~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
....... ....+|+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 4332221 23346899999999988889999999999999999999 9999974
No 142
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.8e-36 Score=316.00 Aligned_cols=199 Identities=23% Similarity=0.264 Sum_probs=165.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC-ccccHHHHHHHHHHHhcccCCCccceeEEEecC------C
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN-IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE------N 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 371 (540)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ......++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467889999999999999999865 68999999997542 223345788999999999999999999999654 3
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
..++||||++++ +.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 569999999765 5555532 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...+
T Consensus 211 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 211 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp C-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 98665422 2344569999999999999999999999999999999999999997543
No 143
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.8e-36 Score=310.62 Aligned_cols=200 Identities=24% Similarity=0.362 Sum_probs=163.8
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-------ccHHHHHHHHHHHhcccCCCccceeEEEecC
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-------GGEVQFQTEVETISLAVHRNLLRLCGFCSTE 370 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 370 (540)
..++|.+.+.||+|+||.||+|... +++.||||++...... .....+.+|++++.+++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 4678999999999999999999875 5899999998754321 11224889999999999999999999975 4
Q ss_pred CeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEc
Q 009208 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---EAVVG 447 (540)
Q Consensus 371 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~ 447 (540)
+..++||||+++|+|.+++.. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 557999999999999988864 35699999999999999999999999 999999999999997544 59999
Q ss_pred ccccccccCCCCCceeecccccccccccccccc---CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 448 DFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST---GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 448 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|||+++..... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 285 DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~ 346 (419)
T 3i6u_A 285 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999876532 22344569999999999853 5678999999999999999999999974
No 144
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-36 Score=326.88 Aligned_cols=195 Identities=27% Similarity=0.419 Sum_probs=166.9
Q ss_pred eeeeccCccEEEEEeC---CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEecCCCCC
Q 009208 308 ILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPNGS 384 (540)
Q Consensus 308 ~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gs 384 (540)
.||+|+||.||+|.+. ++..||||+++.........+|.+|++++.+++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999874 4678999999876555567789999999999999999999999976 56899999999999
Q ss_pred hhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCCCcee-
Q 009208 385 VASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVT- 463 (540)
Q Consensus 385 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~- 463 (540)
|.+++... ...+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.+........
T Consensus 422 L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 495 (613)
T 2ozo_A 422 LHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 495 (613)
T ss_dssp HHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------
T ss_pred HHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeee
Confidence 99999653 45699999999999999999999999 999999999999999999999999999987654322211
Q ss_pred -eccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCcc
Q 009208 464 -TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (540)
Q Consensus 464 -~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~~ 509 (540)
....+|+.|+|||++....++.++|||||||++|||+| |+.||...
T Consensus 496 ~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 496 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp ------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 22335689999999999999999999999999999998 99999743
No 145
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-36 Score=301.92 Aligned_cols=202 Identities=30% Similarity=0.487 Sum_probs=168.8
Q ss_pred cCCCcCCeeeeccCccEEEEEeCC-----CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSD-----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
.+|...+.||+|+||.||+|.... +..||||.++.........++.+|++++.+++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456677899999999999998643 246999999865544455679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 124 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 99999999999999753 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 456 DHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 456 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
...... ......+|+.|+|||.+....++.++||||||+++|||++ |+.||..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 543221 1222346789999999998899999999999999999999 9999963
No 146
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=5.1e-36 Score=299.13 Aligned_cols=198 Identities=32% Similarity=0.470 Sum_probs=173.3
Q ss_pred CCcCCeeeeccCccEEEEEeC-----CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC--CeeEE
Q 009208 303 FSAKNILGRGGFGIVYKGCFS-----DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NERLL 375 (540)
Q Consensus 303 ~~~~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~l 375 (540)
|.+.+.||+|+||.||++.+. +++.||||+++..........+.+|++++.+++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998753 58899999998765445566799999999999999999999999874 57899
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 99999999999999753 489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc--eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSH--VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
...... ......+|+.|+|||++.+..++.++||||||+++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 654322 12344578899999999998999999999999999999999999974
No 147
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.9e-36 Score=307.57 Aligned_cols=201 Identities=24% Similarity=0.361 Sum_probs=176.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... +++.||+|+++..........+.+|++++.+++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356888899999999999999986 6899999999876544455679999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++... ..+++..+..++.+++.||.|||+.+ +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999999763 46899999999999999999999842 7999999999999999999999999999755322
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 123346899999999999999999999999999999999999999753
No 148
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-36 Score=297.32 Aligned_cols=206 Identities=26% Similarity=0.367 Sum_probs=175.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEe--cCCeeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENERLL 375 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~l 375 (540)
.++|.+.+.||+|+||.||+|... +++.||+|.+..... ......+.+|++++.+++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457888999999999999999985 689999999976543 233457899999999999999999999874 4678899
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCceeeCCCCCeEEcccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK-----IIHRDVKAANILLDEDFEAVVGDFG 450 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-----ivH~Dlk~~NILl~~~~~~kl~Dfg 450 (540)
||||+++|+|.+++.........+++..+..++.|+++||+|||+. + |+||||||+||++++++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999986544455699999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 162 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 162 LARILNHDT-SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp HHHHC---C-HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hheeecccc-ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 998765432 1223346899999999999889999999999999999999999999743
No 149
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=301.17 Aligned_cols=202 Identities=27% Similarity=0.491 Sum_probs=168.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCc----EEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGA----LVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
.++|.+.+.||+|+||.||+|... +++ +||+|.++.........++.+|++++.+++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 357888999999999999999964 343 468888876655666778999999999999999999999998754 78
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+|+||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 999999999999999763 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 455 LDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 455 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||+.
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 222 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 6533222 2233447889999999999999999999999999999999 9999974
No 150
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.6e-36 Score=292.61 Aligned_cols=197 Identities=23% Similarity=0.366 Sum_probs=170.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecC--CeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTE--NERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|.+ +++.||||+++.... .....++.+|++++.+++||||+++++++... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 35688889999999999999998 489999999986542 23345799999999999999999999999877 778999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
|||+++|+|.+++... ....+++..+..++.|+++||+|||+. + |+||||||+||++++++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 9999999999999753 234689999999999999999999998 7 99999999999999999999999988764
Q ss_pred cCCCCCceeeccccccccccccccccCCCCc---cCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSE---KTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||..
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 332 2235899999999998765544 89999999999999999999974
No 151
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-36 Score=308.04 Aligned_cols=201 Identities=34% Similarity=0.509 Sum_probs=161.8
Q ss_pred CCCcCCeeeeccCccEEEEEeC--C--CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEec-CCeeEEE
Q 009208 302 NFSAKNILGRGGFGIVYKGCFS--D--GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST-ENERLLV 376 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~--~--g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~lV 376 (540)
.|...+.||+|+||.||+|.+. + +..||||.++.........+|.+|++++.+++||||+++++++.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999864 2 246899998765544556689999999999999999999999754 5678999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.++++.. ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 9999999999999753 34688999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCc---eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 457 HRDSH---VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 457 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
..... ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||..
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~ 299 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence 32211 1233457889999999999999999999999999999999 6777763
No 152
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.7e-36 Score=292.84 Aligned_cols=200 Identities=30% Similarity=0.459 Sum_probs=162.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc---ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA---GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|.+ .++.||||+++..... .....+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35788889999999999999998 4899999998754322 2345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC--------CCCeEEcc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE--------DFEAVVGD 448 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~--------~~~~kl~D 448 (540)
|||+++++|.+++.. ..+++..+..++.|+++||.|||+....+|+||||||+||++++ ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999998853 46899999999999999999999982222999999999999986 67899999
Q ss_pred cccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 449 FGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 449 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
||++....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99998654332 2234589999999999998999999999999999999999999974
No 153
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.9e-36 Score=305.77 Aligned_cols=202 Identities=21% Similarity=0.344 Sum_probs=172.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC-----Cee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-----NER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 373 (540)
..+|.+.+.||+|+||.||+|... +++.||||++...........+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 357889999999999999999875 68899999998655444456789999999999999999999998654 368
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||++ |+|.+++.. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 106 ~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 589988864 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 454 LLDHRDSHV--TTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 454 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 236 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence 665332211 234469999999998755 458999999999999999999999997543
No 154
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=299.13 Aligned_cols=197 Identities=31% Similarity=0.493 Sum_probs=163.9
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEecC
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYM 380 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 380 (540)
++|.+.+.||+|+||.||+|.+ .++.||||++... .....|.+|++++.+++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 4677889999999999999998 5789999998643 34567999999999999999999999886 4478999999
Q ss_pred CCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-eEEcccccccccCCCC
Q 009208 381 PNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-AVVGDFGLAKLLDHRD 459 (540)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-~kl~Dfgla~~~~~~~ 459 (540)
++|+|.+++... .....+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 82 EGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TTCBHHHHHHCS-SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCHHHHHhcc-CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 999999999753 12235789999999999999999999943339999999999999998886 799999999755432
Q ss_pred CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||+.
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 2233589999999999998999999999999999999999999974
No 155
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.6e-36 Score=297.88 Aligned_cols=201 Identities=23% Similarity=0.329 Sum_probs=168.1
Q ss_pred cCCCcC-CeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~-~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
+.|.+. +.||+|+||.||+|... +++.||||+++... ......+.+|++++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 457664 78999999999999964 68999999997653 34456789999999884 7999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~Dfgla~~ 454 (540)
||+++|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++..
T Consensus 91 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 999999999999763 4689999999999999999999999 9999999999999998776 99999999976
Q ss_pred cCCCCC------ceeecccccccccccccccc-----CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 455 LDHRDS------HVTTAVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 455 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
...... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 542211 11223459999999999875 45789999999999999999999999754
No 156
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.5e-35 Score=292.19 Aligned_cols=202 Identities=20% Similarity=0.248 Sum_probs=173.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEE-ecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC-STENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||||++..... ..++.+|++++..++|++++..+.++ ...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS---CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc---hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46788999999999999999996 5789999999875432 23688999999999998877777666 5667789999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~~ 454 (540)
||+ +++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++ ++++.+||+|||++..
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 99999999743 34699999999999999999999999 99999999999999 4888999999999987
Q ss_pred cCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcccc
Q 009208 455 LDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGRA 511 (540)
Q Consensus 455 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~~ 511 (540)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence 6544321 12345699999999999999999999999999999999999999985443
No 157
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.1e-36 Score=308.19 Aligned_cols=199 Identities=22% Similarity=0.303 Sum_probs=168.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-cccHHHHHHHHHHHhccc--CCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-AGGEVQFQTEVETISLAV--HRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lV~ 377 (540)
..|.+.+.||+|+||.||+|...+++.||||++..... ......+.+|++++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45888999999999999999988899999999976442 233457899999999996 599999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
| +.+++|.+++... ..+++..+..++.||++||.|||+. +|+||||||+|||++ ++.+||+|||+++.+..
T Consensus 136 E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp E-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred e-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 9 5688999999753 4688999999999999999999999 999999999999996 57999999999987654
Q ss_pred CCCc-eeecccccccccccccccc-----------CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 3322 2334569999999999865 3688999999999999999999999974
No 158
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.8e-37 Score=300.49 Aligned_cols=196 Identities=23% Similarity=0.367 Sum_probs=169.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCC-C-------cEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSD-G-------ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~-g-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 371 (540)
.++|.+.+.||+|+||.||+|.... + ..||+|++.... ......+.+|++++.+++||||+++++++..++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 3568888999999999999998653 3 579999986543 344567999999999999999999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--------
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE-------- 443 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~-------- 443 (540)
..++||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999763 33489999999999999999999999 9999999999999998887
Q ss_pred eEEcccccccccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 444 AVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 444 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
+||+|||++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|..|+.
T Consensus 160 ~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~ 219 (289)
T 4fvq_A 160 IKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL 219 (289)
T ss_dssp EEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred eeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence 99999999975432 123458999999999987 678999999999999999999654443
No 159
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.6e-36 Score=307.36 Aligned_cols=202 Identities=23% Similarity=0.328 Sum_probs=169.6
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC-----
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE----- 370 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 370 (540)
....++|.+.+.||+|+||.||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567899999999999999999987 4789999999875432 234799999999999999999998443
Q ss_pred ---------------------------------CeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 009208 371 ---------------------------------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLY 417 (540)
Q Consensus 371 ---------------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~ 417 (540)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33789999998 58888887655556789999999999999999999
Q ss_pred HHhcCCCCeEecCCCCCceeeC-CCCCeEEcccccccccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHH
Q 009208 418 LHEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGIL 495 (540)
Q Consensus 418 LH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvi 495 (540)
||+. +|+||||||+||+++ +++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999998 688999999999987654332 2344589999999998765 48999999999999
Q ss_pred HHHHHhCCCCCCcc
Q 009208 496 LLELITGQRALDFG 509 (540)
Q Consensus 496 l~elltg~~p~~~~ 509 (540)
+|||++|+.||...
T Consensus 232 l~ell~g~~pf~~~ 245 (383)
T 3eb0_A 232 FGELILGKPLFSGE 245 (383)
T ss_dssp HHHHHHSSCSSCCS
T ss_pred HHHHHhCCCCCCCC
Confidence 99999999999854
No 160
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=324.71 Aligned_cols=202 Identities=30% Similarity=0.453 Sum_probs=175.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
..++|.+.+.||+|+||.||+|.+.++..||||+++... ....+|.+|++++.+++||||+++++++.. +..++|||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 456788889999999999999999888899999998654 235679999999999999999999999876 67899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.++++... ...+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 342 ~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 342 YMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 999999999997531 23589999999999999999999999 9999999999999999999999999999866432
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
.........++..|+|||++....++.++|||||||++|||+| |+.||..
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2111223346789999999999999999999999999999999 9999974
No 161
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=6.4e-36 Score=293.38 Aligned_cols=200 Identities=24% Similarity=0.365 Sum_probs=173.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +++.||+|+++.... .....++.+|+..+..+ +||||+++++++..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467889999999999999999986 789999999976432 23455788999999998 999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC----------------
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---------------- 440 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---------------- 440 (540)
|||+++|+|.+++.........+++..+..++.|+++||.|||+. +|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999976433335689999999999999999999999 9999999999999984
Q ss_pred ---CCCeEEcccccccccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 441 ---DFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 441 ---~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
...+||+|||.+....... ...||+.|+|||.+.+. .+++++||||||+++|||++|+.|+.
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 4479999999998765432 23489999999999766 56789999999999999999998765
No 162
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=8.6e-36 Score=301.19 Aligned_cols=201 Identities=23% Similarity=0.355 Sum_probs=175.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcccc----------------HHHHHHHHHHHhcccCCCccce
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGG----------------EVQFQTEVETISLAVHRNLLRL 363 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~----------------~~~~~~E~~~l~~l~h~nIv~l 363 (540)
.++|.+.+.||+|+||.||+|.. +|+.||+|++........ ...+.+|++++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46788999999999999999999 999999999875432211 1679999999999999999999
Q ss_pred eEEEecCCeeEEEEecCCCCChhhh------ccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCce
Q 009208 364 CGFCSTENERLLVYPYMPNGSVASR------LRDHIHGRPALDWARRKRIALGTARGLLYLHE-QCDPKIIHRDVKAANI 436 (540)
Q Consensus 364 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NI 436 (540)
++++...+..++||||+++|+|.++ +.. .....+++..+..++.|++.||.|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 443 124679999999999999999999999 8 999999999999
Q ss_pred eeCCCCCeEEcccccccccCCCCCceeeccccccccccccccccC-CCCc-cCCeehhhHHHHHHHhCCCCCCcc
Q 009208 437 LLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSE-KTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 437 Ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+++.++.+||+|||.+...... ......||+.|+|||++.+. .++. ++||||||+++|||++|+.||...
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999876433 33445699999999999877 5666 999999999999999999999743
No 163
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.6e-36 Score=297.10 Aligned_cols=205 Identities=21% Similarity=0.381 Sum_probs=167.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
..+|.+.+.||+|+||.||+|.. .+|+.||+|+++.... .....++.+|++++.+++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35688889999999999999997 4789999999975432 23345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++.........+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999976444456789999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... ......|++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 4322 22344689999999999998999999999999999999999999964
No 164
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.8e-36 Score=293.15 Aligned_cols=199 Identities=29% Similarity=0.451 Sum_probs=176.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 356888999999999999999976 578999999865321 22345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++|+|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999999998753 3689999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .....|++.|+|||++.+..++.++||||||+++|||++|+.||+.
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence 322 2344689999999999998999999999999999999999999974
No 165
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.7e-35 Score=300.91 Aligned_cols=206 Identities=23% Similarity=0.383 Sum_probs=178.1
Q ss_pred HHHHHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-------ccHHHHHHHHHHHhcc-cCCCcccee
Q 009208 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-------GGEVQFQTEVETISLA-VHRNLLRLC 364 (540)
Q Consensus 294 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l-~h~nIv~l~ 364 (540)
.......++|.+.+.||+|+||.||+|... +|+.||||+++..... .....+.+|+.++.++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334445677999999999999999999985 6999999998754321 1134678999999999 799999999
Q ss_pred EEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 009208 365 GFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEA 444 (540)
Q Consensus 365 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 444 (540)
+++...+..++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 9999999999999999999999999753 4689999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCCCCCceeecccccccccccccccc------CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 445 VVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST------GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 240 kl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp EECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 9999999987654322 234569999999999863 3578999999999999999999999974
No 166
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.5e-36 Score=300.69 Aligned_cols=203 Identities=30% Similarity=0.485 Sum_probs=170.8
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcE--EEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGAL--VAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV 376 (540)
++|.+.+.||+|+||.||+|... ++.. ||+|.++..........+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999875 4554 5999987655444556799999999999 899999999999999999999
Q ss_pred EecCCCCChhhhccccC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 009208 377 YPYMPNGSVASRLRDHI------------HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEA 444 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 444 (540)
|||+++|+|.+++.... .....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999997532 2235799999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 445 VVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
||+|||+++...... ......+++.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 244 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244 (327)
T ss_dssp EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence 999999997433211 1223347889999999988889999999999999999998 9999974
No 167
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.3e-37 Score=311.85 Aligned_cols=200 Identities=14% Similarity=0.152 Sum_probs=164.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCc--cccHHHHHHHH---HHHhcccCCCcccee-------EE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNI--AGGEVQFQTEV---ETISLAVHRNLLRLC-------GF 366 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~~E~---~~l~~l~h~nIv~l~-------~~ 366 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.... ......+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46688889999999999999997 4699999999975422 23346789999 455566899999998 66
Q ss_pred EecCC-----------------eeEEEEecCCCCChhhhccccC---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 009208 367 CSTEN-----------------ERLLVYPYMPNGSVASRLRDHI---HGRPALDWARRKRIALGTARGLLYLHEQCDPKI 426 (540)
Q Consensus 367 ~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 426 (540)
+..++ ..++||||+ +|+|.+++.... .....+++..+..++.|+++||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 65543 278999999 689999997531 1123455788999999999999999999 99
Q ss_pred EecCCCCCceeeCCCCCeEEcccccccccCCCCCceeeccccccccccccccccC-----------CCCccCCeehhhHH
Q 009208 427 IHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-----------QSSEKTDVFGFGIL 495 (540)
Q Consensus 427 vH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~Dv~S~Gvi 495 (540)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 3344557 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCc
Q 009208 496 LLELITGQRALDF 508 (540)
Q Consensus 496 l~elltg~~p~~~ 508 (540)
+|||++|+.||..
T Consensus 303 l~elltg~~Pf~~ 315 (377)
T 3byv_A 303 IYWIWCADLPITK 315 (377)
T ss_dssp HHHHHHSSCCC--
T ss_pred HHHHHHCCCCCcc
Confidence 9999999999974
No 168
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.1e-36 Score=301.24 Aligned_cols=202 Identities=22% Similarity=0.309 Sum_probs=165.6
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
..++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++.+++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4567899999999999999999864 68999999997544322 234678999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-----CCCCeEEccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-----EDFEAVVGDFGL 451 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-----~~~~~kl~Dfgl 451 (540)
|||++ |+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|||+
T Consensus 112 ~e~~~-~~L~~~~~~~----~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKN----PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCS-EEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCC-CCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 99998 5999988753 4689999999999999999999999 999999999999994 555699999999
Q ss_pred ccccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 184 a~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 241 (329)
T 3gbz_A 184 ARAFGIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccCCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 9876533222 2334589999999999775 4899999999999999999999999743
No 169
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-36 Score=303.44 Aligned_cols=197 Identities=26% Similarity=0.374 Sum_probs=165.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCC------
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN------ 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 371 (540)
.++|...+.||+|+||.||+|... +|+.||||++..... .....++.+|++++..++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 357888899999999999999974 689999999865332 223457899999999999999999999997653
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 8899998874 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 229 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS 229 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9875432 234468999999999877 67899999999999999999999999854
No 170
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8.8e-36 Score=312.62 Aligned_cols=195 Identities=23% Similarity=0.327 Sum_probs=154.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEec-----CCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCST-----ENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~ 372 (540)
.++|.+.+.||+|+||.||+|... +++.||||++..... .....++.+|++++..++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367899999999999999999875 689999999865432 2234578999999999999999999999843 356
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||+ +|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccc
Confidence 89999998 5788888864 35699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC--------------------------ceeecccccccccccccc-ccCCCCccCCeehhhHHHHHHHhC
Q 009208 453 KLLDHRDS--------------------------HVTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITG 502 (540)
Q Consensus 453 ~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~Dv~S~Gvil~elltg 502 (540)
+....... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 87643221 122345689999999986 456799999999999999999993
No 171
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.3e-36 Score=299.31 Aligned_cols=201 Identities=23% Similarity=0.364 Sum_probs=169.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
++|.+.+.||+|+||.||+|... +|+.||+|++....... ....+.+|++++.+++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 56888899999999999999986 48999999987554322 24467899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999998887653 34689999999999999999999999 9999999999999999999999999999865543
Q ss_pred CCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. ......||+.|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 178 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 178 GE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 22 23344689999999998775 6899999999999999999999999754
No 172
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-36 Score=301.49 Aligned_cols=203 Identities=28% Similarity=0.349 Sum_probs=167.9
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcccc----HHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGG----EVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
..++|.+.+.||+|+||.||+|... +|+.||||+++....... ...+.+|++++.+++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999985 589999999875432211 23678999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||+++ +|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 888887642 34688899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~ 216 (346)
T 1ua2_A 161 SFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216 (346)
T ss_dssp TTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 7654322 23345689999999998664 4899999999999999999999999743
No 173
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.8e-36 Score=294.03 Aligned_cols=200 Identities=34% Similarity=0.508 Sum_probs=160.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|... ..||+|+++..... .....+.+|++++.+++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467889999999999999999874 35999999765432 3345789999999999999999999965 4566899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 99999999998643 45699999999999999999999999 9999999999999999999999999999865432
Q ss_pred C-Cceeeccccccccccccccc---cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 D-SHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~-~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
. ........||+.|+|||.+. ...++.++||||||+++|||++|+.||..
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 2 22233456899999999986 56688899999999999999999999974
No 174
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=293.57 Aligned_cols=200 Identities=28% Similarity=0.391 Sum_probs=172.0
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
..++|.+.+.||+|+||.||+|... +|+.||+|.++... ...++.+|++++.+++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4567899999999999999999986 58999999987643 3357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++|+|.+++... ...+++..+..++.+++.||.|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 104 EYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp ECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 999999999998642 35689999999999999999999999 999999999999999999999999999986654
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 227 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 322 22344689999999999998999999999999999999999999974
No 175
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.2e-36 Score=299.26 Aligned_cols=208 Identities=28% Similarity=0.409 Sum_probs=159.4
Q ss_pred HHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 298 AATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 298 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
...++|.+.+.||+|+||.||+|... +++.||||++..........++.+|++++.+++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999864 68999999987654444456789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 377 YPYMPNGSVASRLRDHI----HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
|||+++++|.+++.... .....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 99999999999986421 1245689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC----Cceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 453 KLLDHRD----SHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 453 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
....... ........||+.|+|||++.. ..++.++||||||+++|||++|+.||..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 7654321 112234468999999999876 5689999999999999999999999974
No 176
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.1e-35 Score=309.14 Aligned_cols=200 Identities=24% Similarity=0.323 Sum_probs=166.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecC-----Ce
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-----NE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 372 (540)
.++|.+.+.||+|+||.||+|... +++.||||+++.... .....++.+|++++..++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467889999999999999999975 588999999975432 23345789999999999999999999998765 57
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||++ |+|.+++.. ...+++..+..++.||++||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999986 599988864 35699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCc---------------------eeecccccccccccccc-ccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 453 KLLDHRDSH---------------------VTTAVRGTVGHIAPEYL-STGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 453 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
+........ ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876543211 12455699999999986 55669999999999999999998655553
No 177
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-35 Score=292.32 Aligned_cols=200 Identities=32% Similarity=0.438 Sum_probs=169.6
Q ss_pred CCCcCCeeeeccCccEEEEEeCC----CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCee-EEE
Q 009208 302 NFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER-LLV 376 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~lV 376 (540)
.|...+.||+|+||.||+|.+.+ +..||+|.++..........+.+|++++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 34556899999999999998632 3379999998755445556799999999999999999999999876655 999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
+||+.+|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 9999999999999752 45689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC---CceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 457 HRD---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 457 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
... ........+|+.|+|||.+.+..++.++||||||+++|||++|..|+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~ 229 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCC
Confidence 321 112233457899999999999999999999999999999999665543
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.7e-35 Score=296.50 Aligned_cols=207 Identities=24% Similarity=0.322 Sum_probs=175.0
Q ss_pred HHHHHhcCCCcC-CeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhccc-CCCccceeEEEecC
Q 009208 295 ELRAATSNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAV-HRNLLRLCGFCSTE 370 (540)
Q Consensus 295 ~l~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~ 370 (540)
..+...+.|.+. +.||+|+||.||+|... +++.||+|+++.... .....++.+|+.++..++ ||||+++++++...
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 334445667766 88999999999999976 589999999876432 334568999999999985 69999999999999
Q ss_pred CeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEc
Q 009208 371 NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVG 447 (540)
Q Consensus 371 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~ 447 (540)
+..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred CeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEe
Confidence 9999999999999999998642 235699999999999999999999999 9999999999999997 7899999
Q ss_pred ccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 448 DFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 448 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 177 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 177 DFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp CGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999998765332 22345699999999999999999999999999999999999999974
No 179
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=7e-36 Score=297.79 Aligned_cols=205 Identities=28% Similarity=0.386 Sum_probs=172.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEe----cCCeeE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS----TENERL 374 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~ 374 (540)
.++|.+.+.||+|+||.||++.. .+|+.||||++.... ......+.+|++++..++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 46788999999999999999997 578999999986543 334557899999999999999999999986 345788
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++|+|.+++.........+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999987555567799999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCc--------eeeccccccccccccccccCC---CCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRDSH--------VTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
....... ......||+.|+|||++.... ++.++||||||+++|||++|+.||+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 4321100 011234799999999987543 68999999999999999999999963
No 180
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8.9e-36 Score=314.82 Aligned_cols=200 Identities=27% Similarity=0.412 Sum_probs=176.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ......+.+|++++.+++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888999999999999999986 789999999875432 34466799999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEccccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAK 453 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~ 453 (540)
|||+.+|+|.+++.. ...+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 105 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 105 GEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp ECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999998865 34689999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
....... .....||+.|+|||++.+ .++.++||||+||++|||++|+.||...
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 230 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGA 230 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCC
Confidence 7654332 234569999999999865 6899999999999999999999999743
No 181
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.3e-35 Score=293.18 Aligned_cols=201 Identities=35% Similarity=0.531 Sum_probs=169.2
Q ss_pred cCCCcCCeeeeccCccEEEEEeCC----CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEe-cCCeeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS-TENERLL 375 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~l 375 (540)
..|.+.+.||+|+||.||+|...+ +..||+|.++..........+.+|++++++++||||+++++++. .++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457778999999999999998643 23689999887554455567999999999999999999999865 4567899
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 99999999999999752 35689999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC---ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCC
Q 009208 456 DHRDS---HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALD 507 (540)
Q Consensus 456 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~ 507 (540)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~ 234 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 234 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCc
Confidence 43221 12233457889999999999999999999999999999999 555655
No 182
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.2e-35 Score=313.20 Aligned_cols=200 Identities=24% Similarity=0.348 Sum_probs=172.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc------------ccHHHHHHHHHHHhcccCCCccceeEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA------------GGEVQFQTEVETISLAVHRNLLRLCGF 366 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~nIv~l~~~ 366 (540)
.++|.+.+.||+|+||.||+|... +++.||+|+++..... .....+.+|++++.+++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 567889999999999999999975 5789999999764322 234578999999999999999999999
Q ss_pred EecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---C
Q 009208 367 CSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---E 443 (540)
Q Consensus 367 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---~ 443 (540)
+...+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999988753 4689999999999999999999999 999999999999999775 6
Q ss_pred eEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 444 AVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 444 ~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+||+|||++....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||...
T Consensus 188 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp EEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999998765432 233456999999999986 46899999999999999999999999743
No 183
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.9e-36 Score=300.57 Aligned_cols=204 Identities=23% Similarity=0.322 Sum_probs=173.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHH-HhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVET-ISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.........++..|..+ +..++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788889999999999999997 47899999999876544445566666666 67889999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++ +|.+++.........+++..+..++.|+++||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 999988764444568999999999999999999999742 899999999999999999999999999986643
Q ss_pred CCCceeeccccccccccccccc----cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLS----TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~----~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
. .......||+.|+|||++. ...++.++|||||||++|||+||+.||+.
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~ 259 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 2 1122346999999999964 34689999999999999999999999974
No 184
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=7.9e-36 Score=293.37 Aligned_cols=204 Identities=23% Similarity=0.293 Sum_probs=161.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHH-HHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|+++.........+ +.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467888999999999999999974 789999999976543333333 445555578889999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||++ |+|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 5888888765555678999999999999999999999842 899999999999999999999999999986654
Q ss_pred CCCceeecccccccccccccc----ccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... .....||+.|+|||++ ....++.++||||||+++|||++|+.||+.
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 322 2334599999999996 556789999999999999999999999973
No 185
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.9e-36 Score=298.54 Aligned_cols=206 Identities=31% Similarity=0.406 Sum_probs=173.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEe------CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF------SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.++|.+.+.||+|+||.||+|.+ .+++.||||.+..........++.+|+.++.+++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999984 247789999997655455566899999999999999999999999999999
Q ss_pred EEEEecCCCCChhhhccccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEc
Q 009208 374 LLVYPYMPNGSVASRLRDHIH---GRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVG 447 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~ 447 (540)
++||||+++|+|.+++..... ....+++..+..++.|+++||.|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999986432 124589999999999999999999999 9999999999999994 4469999
Q ss_pred ccccccccCCCCC-ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 448 DFGLAKLLDHRDS-HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 448 Dfgla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
|||++........ .......||+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 248 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 9999975543221 22234458899999999998899999999999999999998 9999974
No 186
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-35 Score=293.82 Aligned_cols=198 Identities=25% Similarity=0.403 Sum_probs=173.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||++... +|+.||+|.++... ......+.+|++++.+++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 456888999999999999999975 68999999998643 2234468899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEccccccccc
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~~~ 455 (540)
|+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||++ ++++.+||+|||++...
T Consensus 87 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 99999999988653 4689999999999999999999999 99999999999999 78889999999999754
Q ss_pred CCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp CCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 432 12334589999999999998999999999999999999999999974
No 187
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.8e-36 Score=298.23 Aligned_cols=201 Identities=30% Similarity=0.444 Sum_probs=174.7
Q ss_pred cCCCcCCeeeeccCccEEEEEe-----CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEe--cCCee
Q 009208 301 SNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENER 373 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~ 373 (540)
++|.+.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++.+++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5688889999999999999984 368899999997643 333457999999999999999999999886 45668
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||+++++|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccce
Confidence 8999999999999999753 23589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 765443322 2234578889999999988899999999999999999999999864
No 188
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.8e-35 Score=288.77 Aligned_cols=200 Identities=25% Similarity=0.426 Sum_probs=168.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCC--ccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYN--IAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
.++|.+.+.||+|+||.||+|... +|+.||+|.++... .......+.+|++++..++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357888999999999999999986 68999999986532 123345789999999999999999999999999999999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 9999999999999753 4589999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||+.
T Consensus 163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 432 2234458999999999987765 6899999999999999999999974
No 189
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=288.68 Aligned_cols=201 Identities=25% Similarity=0.412 Sum_probs=170.5
Q ss_pred CCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEecC
Q 009208 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYM 380 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~ 380 (540)
+|.....||+|+||.||+|... +++.||+|.++... ......+.+|+.++..++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 4555679999999999999974 68899999987653 334557899999999999999999999999999999999999
Q ss_pred CCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEcccccccccCCCC
Q 009208 381 PNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-DFEAVVGDFGLAKLLDHRD 459 (540)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~Dfgla~~~~~~~ 459 (540)
++++|.+++... .....+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 102 PGGSLSALLRSK-WGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp SEEEHHHHHHHT-TCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCHHHHHHhh-ccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 999999999763 2234577999999999999999999999 9999999999999987 8999999999998765322
Q ss_pred CceeeccccccccccccccccCC--CCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 460 SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 460 ~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.......||+.|+|||++.... ++.++||||||+++|||++|+.||..
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 2223456899999999987643 78999999999999999999999963
No 190
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.9e-36 Score=294.72 Aligned_cols=201 Identities=27% Similarity=0.395 Sum_probs=169.8
Q ss_pred hcCCCcCC-eeeeccCccEEEEEeC---CCcEEEEEEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 300 TSNFSAKN-ILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 300 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
..+|.+.+ .||+|+||.||+|.+. .++.||||+++...... ...++.+|++++..++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999652 46889999997654322 245799999999999999999999999 566789
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 999999999999999752 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCcee--eccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 455 LDHRDSHVT--TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
......... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 655433222 22346789999999988889999999999999999999 9999974
No 191
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.7e-35 Score=312.61 Aligned_cols=199 Identities=26% Similarity=0.373 Sum_probs=173.3
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|... +++.||||+++.... ......+.+|++++.+++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999975 689999999865322 234567899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC---CCCCeEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---EDFEAVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~---~~~~~kl~Dfgla~~ 454 (540)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 999999999988653 4689999999999999999999999 999999999999995 456799999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 224 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65432 2334569999999999875 589999999999999999999999974
No 192
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.1e-35 Score=293.92 Aligned_cols=210 Identities=28% Similarity=0.399 Sum_probs=165.7
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEeC----CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCC
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 371 (540)
....++|.+.+.||+|+||.||+|... .+..||+|.++..... .....+.+|++++.+++||||+++++++...+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 334577888999999999999999864 3458999998765322 23456899999999999999999999997655
Q ss_pred e-----eEEEEecCCCCChhhhccccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 009208 372 E-----RLLVYPYMPNGSVASRLRDHI--HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEA 444 (540)
Q Consensus 372 ~-----~~lV~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~ 444 (540)
. .++||||+++|+|.+++.... .....+++..+..++.|+++||.|||+. +|+||||||+||++++++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3 499999999999999985322 2345799999999999999999999999 99999999999999999999
Q ss_pred EEcccccccccCCCCCc-eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCcc
Q 009208 445 VVGDFGLAKLLDHRDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~~ 509 (540)
||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 99999999866443221 2233457889999999999999999999999999999999 89999743
No 193
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1e-35 Score=308.27 Aligned_cols=198 Identities=28% Similarity=0.388 Sum_probs=164.9
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC----C--ee
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE----N--ER 373 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----~--~~ 373 (540)
.+|...+.||+|+||.||+|... +|+.||||++..... .+.+|+++++.++||||+++++++... + ..
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 35778899999999999999985 589999999865431 234799999999999999999988532 2 35
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEcccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-FEAVVGDFGLA 452 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~Dfgla 452 (540)
++||||+++ ++.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 689999986 66666654334456799999999999999999999999 99999999999999955 56899999999
Q ss_pred cccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~ 260 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD 260 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 87654322 2345689999999998765 7899999999999999999999999854
No 194
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=302.39 Aligned_cols=200 Identities=19% Similarity=0.209 Sum_probs=164.9
Q ss_pred cCCCcCCeeeeccCccEEEEEeC----CCcEEEEEEeccCCccc----------cHHHHHHHHHHHhcccCCCccceeEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS----DGALVAVKRLKDYNIAG----------GEVQFQTEVETISLAVHRNLLRLCGF 366 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l~~~ 366 (540)
++|.+.+.||+|+||.||+|... .+..||+|++....... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999985 57889999987643211 11246778889999999999999999
Q ss_pred Eec----CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 009208 367 CST----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF 442 (540)
Q Consensus 367 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~ 442 (540)
+.. ....++||||+ +++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67899999999 99999999753 3799999999999999999999999 999999999999999877
Q ss_pred --CeEEcccccccccCCCCC------ceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 443 --EAVVGDFGLAKLLDHRDS------HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 443 --~~kl~Dfgla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999999999986643211 111344699999999999998999999999999999999999999963
No 195
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-35 Score=292.15 Aligned_cols=202 Identities=24% Similarity=0.375 Sum_probs=171.6
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
++|.+.+.||+|+||.||+|... +|+.||||+++..... .....+.+|++++.+++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999986 6899999998754322 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|++ |+|.+++... ....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 83 ~~~-~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhh--hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 6999988753 234688999999999999999999999 9999999999999999999999999999866533
Q ss_pred CCceeeccccccccccccccccCC-CCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
.. ......+|+.|+|||.+.+.. ++.++||||||+++|||+||+.||...
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 22 223345899999999987765 799999999999999999999999754
No 196
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6e-35 Score=292.73 Aligned_cols=192 Identities=20% Similarity=0.300 Sum_probs=169.4
Q ss_pred cCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CCCccceeEEEec--CCeeEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCST--ENERLLV 376 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~--~~~~~lV 376 (540)
++|++.+.||+|+||.||+|.. .+++.||||+++.. ....+.+|++++.+++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5688899999999999999986 46899999998743 3567899999999997 9999999999987 5678999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEccccccccc
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF-EAVVGDFGLAKLL 455 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~Dfgla~~~ 455 (540)
|||+++++|.+++. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 99999999999885 378899999999999999999999 999999999999999776 8999999999876
Q ss_pred CCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~ 233 (330)
T 3nsz_A 182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233 (330)
T ss_dssp CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 54332 233468999999999877 6689999999999999999999999964
No 197
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-35 Score=312.48 Aligned_cols=199 Identities=25% Similarity=0.395 Sum_probs=169.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.+.|.+.+.||+|+||.||+|... ++..||+|+++.... ......+.+|++++..++||||+++++++...+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356888999999999999999985 689999999976432 233457899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED---FEAVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~Dfgla~~ 454 (540)
||+++|+|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+|||++.+ +.+||+|||++..
T Consensus 116 e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999988653 4689999999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 65432 233456999999999986 5689999999999999999999999974
No 198
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-35 Score=301.85 Aligned_cols=198 Identities=25% Similarity=0.340 Sum_probs=154.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecC------C
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTE------N 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 371 (540)
.++|.+.+.||+|+||.||+|... +|+.||||++..... .....++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 367889999999999999999864 689999999865432 23345788999999999999999999998654 5
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
..++|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 6898888753 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865432 234568999999999877 678999999999999999999999997543
No 199
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-35 Score=292.71 Aligned_cols=199 Identities=27% Similarity=0.416 Sum_probs=164.3
Q ss_pred HHHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcc--cCCCccceeEEEecC-
Q 009208 294 KELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA--VHRNLLRLCGFCSTE- 370 (540)
Q Consensus 294 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~- 370 (540)
.......++|.+.+.||+|+||.||+|... ++.||||++... ....+..|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 333445678999999999999999999984 899999998643 234556666666554 899999999999876
Q ss_pred ---CeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeeCCCC
Q 009208 371 ---NERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC-----DPKIIHRDVKAANILLDEDF 442 (540)
Q Consensus 371 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~Dlk~~NILl~~~~ 442 (540)
...++||||+++|+|.++++. ..+++..+..++.|++.||.|||+.+ .++|+||||||+||+++.++
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CCCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCC
Confidence 678999999999999999965 25899999999999999999999752 44899999999999999999
Q ss_pred CeEEcccccccccCCCCCce---eeccccccccccccccccCCCCcc------CCeehhhHHHHHHHhC
Q 009208 443 EAVVGDFGLAKLLDHRDSHV---TTAVRGTVGHIAPEYLSTGQSSEK------TDVFGFGILLLELITG 502 (540)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------~Dv~S~Gvil~elltg 502 (540)
.+||+|||++.......... .....||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 99999999997665433221 124469999999999987766655 9999999999999999
No 200
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.5e-36 Score=298.39 Aligned_cols=210 Identities=29% Similarity=0.432 Sum_probs=171.1
Q ss_pred cCHHHHHHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEe
Q 009208 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCS 368 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 368 (540)
+.+.++....++|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+|++++.++ +||||+++++++.
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 334444456788999999999999999999974 68999999987543 3345789999999998 7999999999987
Q ss_pred c------CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 009208 369 T------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF 442 (540)
Q Consensus 369 ~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~ 442 (540)
. .+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~ 166 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENA 166 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTC
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCC
Confidence 6 467899999999999999997532 34689999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccCCCCCceeeccccccccccccccc-----cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 443 EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.+||+|||++........ ......||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 167 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 167 EVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp CEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CEEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 999999999986543221 223446899999999986 56689999999999999999999999974
No 201
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.2e-35 Score=299.71 Aligned_cols=198 Identities=23% Similarity=0.275 Sum_probs=162.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCC------
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN------ 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 371 (540)
.++|.+.+.||+|+||.||+|... +++.||||+++.... ......+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367889999999999999999875 689999999975432 233456889999999999999999999997654
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
..++||||+++ +|.+++.. .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 68999999975 78777752 488999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 174 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 174 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 98654322 223456899999999999989999999999999999999999999754
No 202
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.5e-35 Score=293.17 Aligned_cols=201 Identities=24% Similarity=0.360 Sum_probs=169.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
.+.|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++..++||||+++++++...+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 467889999999999999999986 58999999987543 3445679999999999999999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++++|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 99999999988753 34689999999999999999999999 9999999999999999999999999987532211
Q ss_pred CCceeeccccccccccccccc-----cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
........||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 224 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc
Confidence 11122345899999999983 56789999999999999999999999974
No 203
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-35 Score=289.58 Aligned_cols=196 Identities=26% Similarity=0.448 Sum_probs=172.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEec---------
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST--------- 369 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 369 (540)
..+|.+.+.||+|+||.||+|... +++.||+|+++... ..+.+|++++.+++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 456889999999999999999986 78999999987543 257789999999999999999998754
Q ss_pred -------CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 009208 370 -------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF 442 (540)
Q Consensus 370 -------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~ 442 (540)
....++||||+++|+|.+++.... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 345789999999999999997532 34689999999999999999999999 999999999999999999
Q ss_pred CeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 443 EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
.+||+|||++........ .....||+.|+|||.+.+..++.++||||||+++|||++|..|+.
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999987654322 233458999999999999899999999999999999999999885
No 204
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.4e-35 Score=287.09 Aligned_cols=196 Identities=29% Similarity=0.420 Sum_probs=168.8
Q ss_pred CCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEec----CCeeEE
Q 009208 302 NFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCST----ENERLL 375 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~l 375 (540)
.|.+.+.||+|+||.||+|... ++..||+|.+..... ......+.+|++++.+++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3667788999999999999875 578999999876443 2334578999999999999999999998864 455899
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeC-CCCCeEEcccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLD-EDFEAVVGDFGLA 452 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlk~~NILl~-~~~~~kl~Dfgla 452 (540)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+||+++ +++.+||+|||++
T Consensus 107 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 99999999999999753 4689999999999999999999998 7 99999999999998 7899999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
....... .....||+.|+|||++. ..++.++||||||+++|||++|+.||..
T Consensus 180 ~~~~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 180 TLKRASF---AKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp GGCCTTS---BEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccc---cccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 7554322 23456999999999876 4589999999999999999999999974
No 205
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.4e-37 Score=302.19 Aligned_cols=189 Identities=29% Similarity=0.443 Sum_probs=150.0
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhc--ccCCCccceeEEEecCC----eeE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCGFCSTEN----ERL 374 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~ 374 (540)
++|.+.+.||+|+||.||+|.. +|+.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 5788999999999999999987 5899999998643 34567888888887 79999999999998766 789
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceeeCCCCCeEE
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--------EQCDPKIIHRDVKAANILLDEDFEAVV 446 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NILl~~~~~~kl 446 (540)
+||||+++|+|.+++.+ ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 99999999999999965 25788889999999999999999 66 9999999999999999999999
Q ss_pred cccccccccCCCCCce---eeccccccccccccccccC------CCCccCCeehhhHHHHHHHhC
Q 009208 447 GDFGLAKLLDHRDSHV---TTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG 502 (540)
Q Consensus 447 ~Dfgla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvil~elltg 502 (540)
+|||++.......... .....||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 9999997665433221 2234699999999998776 445789999999999999999
No 206
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.9e-35 Score=294.26 Aligned_cols=205 Identities=28% Similarity=0.396 Sum_probs=174.4
Q ss_pred cCHHHHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhc--ccCCCccceeEEEe
Q 009208 291 YTFKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISL--AVHRNLLRLCGFCS 368 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~ 368 (540)
.++.......++|.+.+.||+|+||.||+|.. +|+.||||+++.. ....+.+|.+++.. ++||||+++++++.
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 34444455678899999999999999999998 6899999998643 34567888888887 78999999999998
Q ss_pred cCC----eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCce
Q 009208 369 TEN----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--------EQCDPKIIHRDVKAANI 436 (540)
Q Consensus 369 ~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~Dlk~~NI 436 (540)
..+ ..++||||+++|+|.+++.+ ..+++..+..++.|++.||.||| +. +|+||||||+||
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI 178 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI 178 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence 776 78999999999999999975 35899999999999999999999 66 999999999999
Q ss_pred eeCCCCCeEEcccccccccCCCCCc---eeeccccccccccccccccC------CCCccCCeehhhHHHHHHHhC-----
Q 009208 437 LLDEDFEAVVGDFGLAKLLDHRDSH---VTTAVRGTVGHIAPEYLSTG------QSSEKTDVFGFGILLLELITG----- 502 (540)
Q Consensus 437 Ll~~~~~~kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~Dv~S~Gvil~elltg----- 502 (540)
++++++.+||+|||++......... ......||+.|+|||++.+. .++.++||||||+++|||+||
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999876544332 12344699999999998765 334789999999999999999
Q ss_pred -----CCCCCc
Q 009208 503 -----QRALDF 508 (540)
Q Consensus 503 -----~~p~~~ 508 (540)
+.||..
T Consensus 259 ~~~~~~~p~~~ 269 (342)
T 1b6c_B 259 IHEDYQLPYYD 269 (342)
T ss_dssp BCCCCCCTTTT
T ss_pred cccccccCccc
Confidence 778864
No 207
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.5e-35 Score=299.21 Aligned_cols=209 Identities=23% Similarity=0.306 Sum_probs=163.9
Q ss_pred HHHHHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCe
Q 009208 294 KELRAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE 372 (540)
Q Consensus 294 ~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 372 (540)
.+.....++|.+.+.||+|+||.||+|... +|+.||||++...... ...+.+|++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 445667789999999999999999999985 6899999998654322 2356778888899999999999999865433
Q ss_pred -------eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCceeeCC-CC
Q 009208 373 -------RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH--EQCDPKIIHRDVKAANILLDE-DF 442 (540)
Q Consensus 373 -------~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~Dlk~~NILl~~-~~ 442 (540)
.++||||+++ +|...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999986 555555544445667899999999999999999999 77 9999999999999996 89
Q ss_pred CeEEcccccccccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 443 EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 443 ~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
.+||+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 236 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236 (360)
T ss_dssp EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 999999999987654332 2344689999999998665 48999999999999999999999998543
No 208
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.6e-35 Score=293.48 Aligned_cols=200 Identities=26% Similarity=0.379 Sum_probs=168.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-------ccHHHHHHHHHHHhcccCCCccceeEEEecCC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-------GGEVQFQTEVETISLAVHRNLLRLCGFCSTEN 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 371 (540)
.++|.+.+.||+|+||.||+|... +++.||||.++..... .....+.+|++++.+++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467899999999999999999975 5789999998754321 12235889999999999999999999987655
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEcc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGD 448 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~D 448 (540)
.++||||+++|+|.+++.. ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 8999999999999998864 35689999999999999999999999 9999999999999987654 99999
Q ss_pred cccccccCCCCCceeeccccccccccccccc---cCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 449 FGLAKLLDHRDSHVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 449 fgla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
||+++..... .......||+.|+|||++. ...++.++||||||+++|||++|+.||...
T Consensus 161 fg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 161 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp CTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred Cccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 9999876432 2223456899999999974 466889999999999999999999999743
No 209
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.1e-35 Score=296.81 Aligned_cols=201 Identities=24% Similarity=0.398 Sum_probs=171.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC-----Cee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-----NER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 373 (540)
.++|.+.+.||+|+||.||+|... +|+.||||+++.........++.+|++++.+++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999975 68999999997655444456788999999999999999999988654 678
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||++ |+|.+++.. ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 689888864 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCc---------eeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 454 LLDHRDSH---------VTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 454 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
........ ......||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 76532211 1123468999999998765 67899999999999999999999999754
No 210
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=9.6e-36 Score=303.68 Aligned_cols=199 Identities=11% Similarity=0.036 Sum_probs=152.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc--ccHHHHHHHHHHHhcc--cCCCcccee-------EEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA--GGEVQFQTEVETISLA--VHRNLLRLC-------GFC 367 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~h~nIv~l~-------~~~ 367 (540)
..+|...+.||+|+||.||+|... +|+.||||+++..... .....+.+|++++..+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345788899999999999999975 7899999999875432 2234577885544444 699988754 444
Q ss_pred ecC-----------------CeeEEEEecCCCCChhhhccccCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCC
Q 009208 368 STE-----------------NERLLVYPYMPNGSVASRLRDHIHGRPALDWARR------KRIALGTARGLLYLHEQCDP 424 (540)
Q Consensus 368 ~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~ 424 (540)
..+ ...++||||++ |+|.+++... ...+.+..+ ..++.|+++||+|||+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 332 33799999999 8999999863 123344555 77889999999999999
Q ss_pred CeEecCCCCCceeeCCCCCeEEcccccccccCCCCCceeecccccccccccccccc--CCCCccCCeehhhHHHHHHHhC
Q 009208 425 KIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITG 502 (540)
Q Consensus 425 ~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvil~elltg 502 (540)
+|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986542 2224457899999999987 6789999999999999999999
Q ss_pred CCCCCcc
Q 009208 503 QRALDFG 509 (540)
Q Consensus 503 ~~p~~~~ 509 (540)
+.||...
T Consensus 290 ~~Pf~~~ 296 (371)
T 3q60_A 290 FLPFGLV 296 (371)
T ss_dssp SCSTTBC
T ss_pred CCCCCCc
Confidence 9999754
No 211
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.1e-35 Score=303.38 Aligned_cols=199 Identities=24% Similarity=0.341 Sum_probs=165.1
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCe------eE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE------RL 374 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~------~~ 374 (540)
.+|...+.||+|+||.||+|....+..||+|++...... ..+|+++++.++||||+++++++...+. .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468888999999999999999987777999988654321 2469999999999999999999864433 78
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeEEccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAVVGDFGLAK 453 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~Dfgla~ 453 (540)
+||||++++. ...+.........+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETV-YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEH-HHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccH-HHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 9999998754 333333223345799999999999999999999999 999999999999999 79999999999998
Q ss_pred ccCCCCCceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
....... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 191 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 246 (394)
T 4e7w_A 191 ILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246 (394)
T ss_dssp ECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 7644332 2345689999999998764 58999999999999999999999998543
No 212
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=297.10 Aligned_cols=200 Identities=34% Similarity=0.527 Sum_probs=162.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHH--HhcccCCCccceeEEEec-----CCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVET--ISLAVHRNLLRLCGFCST-----ENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~~~-----~~~ 372 (540)
.++|.+.+.||+|+||.||+|.. +++.||||+++... ...+..|.++ +..++||||+++++.+.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46788899999999999999987 78999999987532 3345555555 445899999999986532 335
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCceeeCCCCCeEE
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------DPKIIHRDVKAANILLDEDFEAVV 446 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~Dlk~~NILl~~~~~~kl 446 (540)
.++||||+++|+|.+++... ..++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 68999999999999999753 4589999999999999999999863 348999999999999999999999
Q ss_pred cccccccccCCCC-------Cceeecccccccccccccccc-------CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 447 GDFGLAKLLDHRD-------SHVTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 447 ~Dfgla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+|||+++.+.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..+
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~ 238 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence 9999998765322 111224469999999999876 45678999999999999999998877543
No 213
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.6e-35 Score=304.10 Aligned_cols=199 Identities=21% Similarity=0.252 Sum_probs=171.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcc------cCCCccceeEEEecCCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLA------VHRNLLRLCGFCSTENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~l~~~~~~~~~ 372 (540)
..+|.+.+.||+|+||.||+|... +++.||||+++... ....++.+|++++..+ .|+||+++++++...+.
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 356888999999999999999875 58999999997532 2344677888888776 56799999999999999
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--eEEcccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE--AVVGDFG 450 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~Dfg 450 (540)
.++||||+. ++|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKN--KFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999996 6899988753 234589999999999999999999999 9999999999999999887 9999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...+
T Consensus 248 ~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 248 SSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 99765432 233468999999999999999999999999999999999999997543
No 214
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=294.63 Aligned_cols=202 Identities=28% Similarity=0.482 Sum_probs=173.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-----CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCC--e
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-----SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTEN--E 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~ 372 (540)
.++|.+.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|++++.+++||||+++++++...+ .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 35678889999999999999984 368999999997643 334557999999999999999999999987654 6
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLA 452 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla 452 (540)
.++||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 89999999999999999763 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCce--eeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 453 KLLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 453 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.......... .....++..|+|||.+.+..++.++||||||+++|||+||+.|+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 8765443321 1233477889999999988899999999999999999999999863
No 215
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.4e-35 Score=320.00 Aligned_cols=194 Identities=28% Similarity=0.412 Sum_probs=164.7
Q ss_pred CeeeeccCccEEEEEeC---CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEEecCCC
Q 009208 307 NILGRGGFGIVYKGCFS---DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVYPYMPN 382 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~e~~~~ 382 (540)
+.||+|+||.||+|.+. .++.||||+++.... .....++.+|++++.+++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999763 467899999986433 2335689999999999999999999999964 458899999999
Q ss_pred CChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCCCc-
Q 009208 383 GSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSH- 461 (540)
Q Consensus 383 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~- 461 (540)
|+|.+++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++.+......
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999975 34689999999999999999999999 9999999999999999999999999999876543321
Q ss_pred -eeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 462 -VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 462 -~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
......+|+.|+|||++....++.++|||||||++|||++ |+.||..
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~ 575 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2233346789999999999999999999999999999998 9999974
No 216
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.6e-36 Score=301.48 Aligned_cols=197 Identities=20% Similarity=0.257 Sum_probs=169.3
Q ss_pred cCCCcCCeeeeccCccEEEEEeCC---------CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccc---------
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSD---------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLR--------- 362 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~--------- 362 (540)
++|.+.+.||+|+||.||+|.... ++.||+|.++.. ..+.+|++++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 578889999999999999999764 789999998754 25889999999999999998
Q ss_pred ------eeEEEec-CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 009208 363 ------LCGFCST-ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (540)
Q Consensus 363 ------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~N 435 (540)
+++++.. .+..++||||+ +++|.+++... ....+++..+..++.|+++||.|||+. +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 5677765 67889999999 99999999753 135699999999999999999999999 99999999999
Q ss_pred eeeCCCC--CeEEcccccccccCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 436 ILLDEDF--EAVVGDFGLAKLLDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 436 ILl~~~~--~~kl~Dfgla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
|+++.++ .+||+|||+++.+...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 9999999999866432211 1133469999999999999899999999999999999999999998
Q ss_pred cc
Q 009208 508 FG 509 (540)
Q Consensus 508 ~~ 509 (540)
..
T Consensus 270 ~~ 271 (352)
T 2jii_A 270 NC 271 (352)
T ss_dssp GG
T ss_pred cC
Confidence 53
No 217
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.1e-35 Score=320.22 Aligned_cols=203 Identities=24% Similarity=0.382 Sum_probs=172.3
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCC----CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSD----GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
..++|.+.+.||+|+||.||+|.+.. +..||+|+++..........+.+|+.++.+++||||+++++++. ++..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34678888999999999999998742 56799999876554445567999999999999999999999985 46689
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 467 lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCee
Confidence 999999999999999753 34689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 455 LDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 455 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
.............+|+.|+|||++....++.++||||||+++|||++ |+.||..
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 65544333344457889999999998899999999999999999997 9999974
No 218
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=295.30 Aligned_cols=203 Identities=27% Similarity=0.354 Sum_probs=157.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CCCccceeEEEe--------c
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCS--------T 369 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~--------~ 369 (540)
..+|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++.++. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 356888999999999999999975 68999999986543 333457899999999996 999999999984 3
Q ss_pred CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeeCCCCCeEEc
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPK--IIHRDVKAANILLDEDFEAVVG 447 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~--ivH~Dlk~~NILl~~~~~~kl~ 447 (540)
....++||||+. |+|.+++.... ....+++..+..++.|++.||.|||+. + |+||||||+||++++++.+||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 345789999996 79999887532 245699999999999999999999998 7 9999999999999999999999
Q ss_pred ccccccccCCCCCce-----------eecccccccccccccc---ccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 448 DFGLAKLLDHRDSHV-----------TTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 448 Dfgla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|||+++......... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||..
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 999998765432211 1134589999999998 566789999999999999999999999974
No 219
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.1e-34 Score=286.58 Aligned_cols=200 Identities=26% Similarity=0.366 Sum_probs=174.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc--------cccHHHHHHHHHHHhccc-CCCccceeEEEec
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI--------AGGEVQFQTEVETISLAV-HRNLLRLCGFCST 369 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 369 (540)
.++|.+.+.||+|+||.||+|... +|+.||||+++.... ......+.+|++++.++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467889999999999999999985 689999999975431 112346889999999996 9999999999999
Q ss_pred CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccc
Q 009208 370 ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDF 449 (540)
Q Consensus 370 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 449 (540)
.+..++||||+++++|.+++... ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999753 4689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccc------cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLS------TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|++........ .....||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 169 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 169 GFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp TTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 99987654322 23456899999999985 45678999999999999999999999964
No 220
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.7e-35 Score=298.49 Aligned_cols=196 Identities=23% Similarity=0.345 Sum_probs=166.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCee----
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENER---- 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---- 373 (540)
.++|...+.||+|+||.||+|... +|+.||||+++..... .....+.+|++++..++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888899999999999999875 6899999999764322 2245788999999999999999999999876654
Q ss_pred --EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 374 --LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 374 --~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 688777642 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 245 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 245 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 9865432 234568999999999877 67899999999999999999999999743
No 221
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.2e-35 Score=288.52 Aligned_cols=197 Identities=32% Similarity=0.469 Sum_probs=164.8
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecC-CeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTE-NERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lV~e 378 (540)
.++|.+.+.||+|+||.||+|.. .|+.||||.++... ....+.+|++++.+++||||+++++++... +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 46788899999999999999988 58899999987532 345789999999999999999999997654 47899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCC
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHR 458 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~ 458 (540)
|+++|+|.+++... ....+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 170 (278)
T ss_dssp CCTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred cCCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence 99999999999753 122378999999999999999999999 9999999999999999999999999999755432
Q ss_pred CCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCcc
Q 009208 459 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDFG 509 (540)
Q Consensus 459 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~~ 509 (540)
. ....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 171 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 171 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred c----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 22347889999999998899999999999999999998 99999743
No 222
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-34 Score=302.87 Aligned_cols=201 Identities=19% Similarity=0.241 Sum_probs=171.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccC-CCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH-RNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|.+.+.||+|+||.||+|.. .+++.||||+++..... .++.+|++++..++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 36788999999999999999997 46899999987754322 257899999999987 55556666667788899999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---CCCCCeEEcccccccc
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL---DEDFEAVVGDFGLAKL 454 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~Dfgla~~ 454 (540)
||+ +++|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+|||+ ++++.+||+|||+++.
T Consensus 83 e~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999 99999999753 34699999999999999999999999 99999999999999 6889999999999987
Q ss_pred cCCCCCc------eeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 455 LDHRDSH------VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 455 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 6543321 1224569999999999999999999999999999999999999998543
No 223
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=285.45 Aligned_cols=203 Identities=23% Similarity=0.337 Sum_probs=170.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc---cccHHHHHHHHHHHhcccCCCccceeEEEe--cCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI---AGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~ 373 (540)
.++|.+.+.||+|+||.||++... +++.||+|+++.... ......+.+|++++.+++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 467999999999999999999975 689999999975431 234567999999999999999999999984 45678
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||++++ |.+++... ....+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999877 77777643 245689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CceeeccccccccccccccccCC--CCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRD-SHVTTAVRGTVGHIAPEYLSTGQ--SSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
...... ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 765322 22234456999999999987644 47899999999999999999999974
No 224
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.4e-35 Score=302.37 Aligned_cols=200 Identities=25% Similarity=0.342 Sum_probs=154.2
Q ss_pred CCc-CCeeeeccCccEEEEEeC---CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEe--cCCeeEEE
Q 009208 303 FSA-KNILGRGGFGIVYKGCFS---DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS--TENERLLV 376 (540)
Q Consensus 303 ~~~-~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~lV 376 (540)
|.+ .+.||+|+||.||+|..+ +++.||+|++..... ...+.+|++++++++||||+++++++. .....++|
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 444 458999999999999975 578999999975432 246889999999999999999999995 46789999
Q ss_pred EecCCCCChhhhccccC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEc
Q 009208 377 YPYMPNGSVASRLRDHI-----HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL----DEDFEAVVG 447 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~ 447 (540)
|||++ |+|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ +.++.+||+
T Consensus 99 ~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~ 174 (405)
T 3rgf_A 99 FDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 174 (405)
T ss_dssp EECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEEC
T ss_pred EeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEE
Confidence 99997 57887775321 1223589999999999999999999999 99999999999999 678899999
Q ss_pred ccccccccCCCCC--ceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 448 DFGLAKLLDHRDS--HVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 448 Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 175 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 175 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999987654321 222345689999999998874 5899999999999999999999999743
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=289.04 Aligned_cols=200 Identities=25% Similarity=0.373 Sum_probs=163.1
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEe-----------
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCS----------- 368 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----------- 368 (540)
++|.+.+.||+|+||.||+|... +++.||+|++.... .....++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 57888899999999999999986 48999999987543 334457899999999999999999999874
Q ss_pred ---cCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCe
Q 009208 369 ---TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEA 444 (540)
Q Consensus 369 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ 444 (540)
..+..++||||++ |+|.+++.+ ..+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999997 699998863 4689999999999999999999999 999999999999997 56799
Q ss_pred EEcccccccccCCCCC--ceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 445 VVGDFGLAKLLDHRDS--HVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
||+|||+++....... .......+|..|+|||.+.. ..++.++||||||+++|||++|+.||....
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 229 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999987643221 12233457999999998865 678999999999999999999999998543
No 226
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.5e-35 Score=291.07 Aligned_cols=203 Identities=25% Similarity=0.390 Sum_probs=171.2
Q ss_pred HhcCCCcCCeeeeccCccEEEEEe--CCCcEEEEEEeccCCccc-cHHHHHHHHHHHhcc---cCCCccceeEEEe----
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCF--SDGALVAVKRLKDYNIAG-GEVQFQTEVETISLA---VHRNLLRLCGFCS---- 368 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~nIv~l~~~~~---- 368 (540)
..++|.+.+.||+|+||.||+|.. .+|+.||+|+++...... ....+.+|++++..+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 368899999987543221 123466777777666 8999999999987
Q ss_pred -cCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEc
Q 009208 369 -TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVG 447 (540)
Q Consensus 369 -~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 447 (540)
.....++||||++ |+|.+++.... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 69999987632 34589999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 448 DFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 448 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
|||+++...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 222 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence 999998654321 223456899999999999989999999999999999999999999754
No 227
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.6e-35 Score=287.47 Aligned_cols=202 Identities=34% Similarity=0.477 Sum_probs=163.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC--CCc--EEEEEEeccCCc--cccHHHHHHHHHHHhcccCCCccceeEEEecCCee
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS--DGA--LVAVKRLKDYNI--AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENER 373 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~--~g~--~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 373 (540)
.++|.+.+.||+|+||.||+|.+. +++ .||||.++.... ......+.+|++++.+++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 356888899999999999999863 333 699999876432 233457899999999999999999999998765 8
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++|+||+++|+|.+++... ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 8999999999999999753 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCce--eeccccccccccccccccCCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 454 LLDHRDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
......... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 765443322 223457889999999988889999999999999999999 9999974
No 228
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-34 Score=296.48 Aligned_cols=200 Identities=21% Similarity=0.252 Sum_probs=169.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhccc--------CCCccceeEEEe--
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV--------HRNLLRLCGFCS-- 368 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l~~~~~-- 368 (540)
.++|.+.+.||+|+||.||+|... +++.||||+++.. ......+.+|++++..++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 367899999999999999999864 6889999999753 233457889999999886 788999999987
Q ss_pred --cCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----
Q 009208 369 --TENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDF---- 442 (540)
Q Consensus 369 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~---- 442 (540)
.....++||||+ ++++.+++... ....+++..+..++.|++.||.|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 556789999999 66666666542 2346899999999999999999999854 799999999999999775
Q ss_pred ---------------------------------------------CeEEcccccccccCCCCCceeeccccccccccccc
Q 009208 443 ---------------------------------------------EAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEY 477 (540)
Q Consensus 443 ---------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~ 477 (540)
.+||+|||++...... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999866432 233468999999999
Q ss_pred cccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 478 LSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 478 ~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
+.+..++.++|||||||++|||+||+.||....
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999999999999999999999998544
No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.7e-34 Score=290.16 Aligned_cols=199 Identities=22% Similarity=0.318 Sum_probs=172.2
Q ss_pred hcCCCcCCeeeeccCccEEEEEe--CCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCC------ccceeEEEecCC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF--SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN------LLRLCGFCSTEN 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~ 371 (540)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+|++++..++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 35788999999999999999986 368899999987532 33456889999998887654 999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-----------
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE----------- 440 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~----------- 440 (540)
..++||||+ +++|.+++... ....+++..+..++.|+++||+|||+. +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKEN--GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cEEEEEcCC-CCCHHHHHHhc--CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 999999999 89999998753 234689999999999999999999999 9999999999999987
Q ss_pred --------CCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 441 --------DFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 441 --------~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 238 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence 668999999999865432 233468999999999999899999999999999999999999998543
No 230
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=290.65 Aligned_cols=196 Identities=23% Similarity=0.341 Sum_probs=165.9
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCcc-ccHHHHHHHHHHHhcccCCCccceeEEEecCCe-----
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIA-GGEVQFQTEVETISLAVHRNLLRLCGFCSTENE----- 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 372 (540)
.++|...+.||+|+||.||+|... +|+.||||++...... .....+.+|+.++..++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 356888899999999999999975 6899999999754322 224578899999999999999999999987654
Q ss_pred -eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccc
Q 009208 373 -RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGL 451 (540)
Q Consensus 373 -~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgl 451 (540)
.++||||++ |+|.+++.. .+++..+..++.|+++||.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 588777642 489999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCceeecccccccccccccccc-CCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 452 AKLLDHRDSHVTTAVRGTVGHIAPEYLST-GQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 452 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 227 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 227 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9865432 233468999999999877 67899999999999999999999999854
No 231
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.7e-34 Score=289.10 Aligned_cols=204 Identities=26% Similarity=0.334 Sum_probs=153.1
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHH-HHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVE-TISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|...+.||+|+||.||+|... +|+.||||+++.........++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888899999999999999985 689999999986544444455666666 677889999999999999999999999
Q ss_pred ecCCCCChhhhccccC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 378 PYMPNGSVASRLRDHI-HGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
||+++ +|.+++.... .....+++..+..++.|+++||.|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 7777765311 12457899999999999999999999842 89999999999999999999999999998664
Q ss_pred CCCCceeecccccccccccccc----ccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYL----STGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
.... .....||+.|+|||++ .+..++.++||||||+++|||++|+.||..
T Consensus 178 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 178 DSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred cccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 3322 2233589999999998 456689999999999999999999999974
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.3e-34 Score=281.65 Aligned_cols=201 Identities=25% Similarity=0.361 Sum_probs=174.5
Q ss_pred HHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeEE
Q 009208 298 AATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 298 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 375 (540)
...++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++.+++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34567999999999999999999986 689999999875432 3345679999999999999999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEcccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED---FEAVVGDFGLA 452 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~Dfgla 452 (540)
|+||+++++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999988653 3689999999999999999999999 99999999999999754 47999999999
Q ss_pred cccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 453 KLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 453 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
........ .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||..
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 86654322 223458999999999865 489999999999999999999999974
No 233
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.6e-34 Score=289.01 Aligned_cols=197 Identities=23% Similarity=0.310 Sum_probs=146.1
Q ss_pred hcCCCcC-CeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEec----CCee
Q 009208 300 TSNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST----ENER 373 (540)
Q Consensus 300 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 373 (540)
.++|.+. +.||+|+||.||+|... +|+.||||++.... ....+....+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4678774 46999999999999986 68999999986532 122223334566789999999999865 4458
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEcccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFG 450 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~Dfg 450 (540)
++||||+++|+|.+++.+. ....+++..+..++.|+++||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 9999999999999999753 234699999999999999999999999 9999999999999986 4559999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+++...... .....||+.|+|||++....++.++||||||+++|||++|+.||...
T Consensus 177 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 177 FAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred cceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 998654322 23445899999999998888999999999999999999999999743
No 234
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=290.97 Aligned_cols=204 Identities=25% Similarity=0.406 Sum_probs=168.2
Q ss_pred HHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-cccHHHHHHHHHHHhcccCCCccceeEEEecCCeeE
Q 009208 296 LRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-AGGEVQFQTEVETISLAVHRNLLRLCGFCSTENERL 374 (540)
Q Consensus 296 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 374 (540)
+....++|.+.+.||+|+||.||+|...+ .||+|+++.... ......+.+|++++.+++||||+++++++...+..+
T Consensus 28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp SSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 33446788999999999999999998853 499999875432 222345788999999999999999999999999999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
+||||+++++|.+++.+. ...+++..+..++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||++..
T Consensus 106 iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp EECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred EEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 999999999999999753 34689999999999999999999999 999999999999998 67999999999875
Q ss_pred cCCCC----Cceeecccccccccccccccc---------CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 455 LDHRD----SHVTTAVRGTVGHIAPEYLST---------GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 455 ~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... ........||+.|+|||++.. ..++.++||||||+++|||++|+.||..
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 245 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT 245 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSS
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 43211 112233458999999999864 3578899999999999999999999974
No 235
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-34 Score=316.71 Aligned_cols=192 Identities=23% Similarity=0.339 Sum_probs=166.8
Q ss_pred cCCCcCCeeeeccCccEEEEEeC--CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEecCCe-----e
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS--DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCSTENE-----R 373 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-----~ 373 (540)
++|.+.+.||+|+||.||+|... +|+.||||++...........+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67889999999999999999975 5899999998765444445678999999999999999999999987655 6
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
++||||+++++|.+++.. .+++..+..++.|+++||.|||+. +|+||||||+|||++++ .+||+|||+++
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccch
Confidence 999999999999887643 589999999999999999999999 99999999999999986 99999999998
Q ss_pred ccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 454 LLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 454 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
..... ....||++|+|||++.+.. +.++|||||||++|||++|..||..
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcc
Confidence 76543 3346999999999987654 8999999999999999999999874
No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4e-34 Score=282.74 Aligned_cols=194 Identities=28% Similarity=0.421 Sum_probs=161.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEec---------
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST--------- 369 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 369 (540)
.++|.+.+.||+|+||.||+|... +++.||+|+++.. ......+.+|++++.+++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 457888999999999999999974 7899999998643 2334578999999999999999999998754
Q ss_pred ----CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 009208 370 ----ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAV 445 (540)
Q Consensus 370 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~k 445 (540)
.+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 35678999999999999999752 34678899999999999999999999 999999999999999999999
Q ss_pred EcccccccccCCCC-------------CceeeccccccccccccccccC-CCCccCCeehhhHHHHHHHh
Q 009208 446 VGDFGLAKLLDHRD-------------SHVTTAVRGTVGHIAPEYLSTG-QSSEKTDVFGFGILLLELIT 501 (540)
Q Consensus 446 l~Dfgla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~Dv~S~Gvil~ellt 501 (540)
|+|||++....... ........||+.|+|||++.+. .++.++||||||+++|||++
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 99999998654321 1122344589999999998764 68999999999999999998
No 237
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.6e-34 Score=285.01 Aligned_cols=201 Identities=21% Similarity=0.298 Sum_probs=167.5
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-cccHHHHHHHHHHHhccc--CCCccceeEEEecCCeeEE
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-AGGEVQFQTEVETISLAV--HRNLLRLCGFCSTENERLL 375 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~l 375 (540)
..++|.+.+.||+|+||.||++...+++.||||++..... ......+.+|++++.+++ |+||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 4567889999999999999999998899999999975432 223457899999999997 5999999999999999999
Q ss_pred EEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccccc
Q 009208 376 VYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLL 455 (540)
Q Consensus 376 V~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~ 455 (540)
||| +.+++|.+++... ..+++..+..++.|+++||.|||+. +|+||||||+||++++ +.+||+|||+++..
T Consensus 106 v~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 999 6688999999753 4689999999999999999999999 9999999999999975 79999999999876
Q ss_pred CCCCCc-eeecccccccccccccccc-----------CCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 456 DHRDSH-VTTAVRGTVGHIAPEYLST-----------GQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 456 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
...... ......||+.|+|||.+.. ..++.++||||||+++|||++|+.||..
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 543221 2234468999999999865 4678899999999999999999999974
No 238
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.6e-34 Score=291.75 Aligned_cols=201 Identities=24% Similarity=0.297 Sum_probs=170.2
Q ss_pred HhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CC-----CccceeEEEecCC
Q 009208 299 ATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HR-----NLLRLCGFCSTEN 371 (540)
Q Consensus 299 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~ 371 (540)
..++|.+.+.||+|+||.||+|... +++.||||+++... ....++..|++++..++ |+ +|+++.+++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 4578999999999999999999875 68899999997532 23446778888888775 55 4999999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC--CCCCeEEccc
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD--EDFEAVVGDF 449 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~--~~~~~kl~Df 449 (540)
..++||||++ |+|.+++... ....+++..+..++.|++.||.|||.. ..+|+||||||+|||++ .++.+||+||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNT--NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred ceEEEEecCC-CCHHHHHhhc--CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999996 5999998763 224589999999999999999999952 22899999999999995 5778999999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 206 G~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 206 GSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999876432 23356899999999999999999999999999999999999999854
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.8e-34 Score=298.68 Aligned_cols=199 Identities=25% Similarity=0.293 Sum_probs=156.5
Q ss_pred CCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEEecC
Q 009208 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYPYM 380 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e~~ 380 (540)
.|...+.||+|+||+||.+...+|+.||||++... ....+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 34456889999999998776668999999998653 234678999999876 8999999999999999999999999
Q ss_pred CCCChhhhccccCCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-------------CCe
Q 009208 381 PNGSVASRLRDHIHGRPA---LDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDED-------------FEA 444 (540)
Q Consensus 381 ~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~-------------~~~ 444 (540)
+ |+|.+++......... .++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999999754221111 13334678999999999999999 99999999999999754 489
Q ss_pred EEcccccccccCCCCCc---eeecccccccccccccccc-------CCCCccCCeehhhHHHHHHHh-CCCCCCc
Q 009208 445 VVGDFGLAKLLDHRDSH---VTTAVRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELIT-GQRALDF 508 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~k~Dv~S~Gvil~ellt-g~~p~~~ 508 (540)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||..
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 99999999877643322 1234569999999999865 568999999999999999999 9999963
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=288.23 Aligned_cols=202 Identities=26% Similarity=0.393 Sum_probs=164.9
Q ss_pred HHHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-----cHHHHHHHHHHHhcc----cCCCccceeEE
Q 009208 297 RAATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLA----VHRNLLRLCGF 366 (540)
Q Consensus 297 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l----~h~nIv~l~~~ 366 (540)
....++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344578999999999999999999874 68999999997543221 122466789999888 89999999999
Q ss_pred EecCCeeEEEEec-CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCe
Q 009208 367 CSTENERLLVYPY-MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEA 444 (540)
Q Consensus 367 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~ 444 (540)
+...+..++|+|| +.+++|.+++.+. ..+++..+..++.|+++||.|||+. +|+||||||+||+++ +++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 8899999999763 4689999999999999999999999 999999999999999 88999
Q ss_pred EEcccccccccCCCCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 445 VVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 445 kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
||+|||++....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..
T Consensus 180 kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 180 KLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp EECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 999999998765432 234458999999999877666 4589999999999999999999974
No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1e-34 Score=289.97 Aligned_cols=201 Identities=24% Similarity=0.366 Sum_probs=173.2
Q ss_pred HHhcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc-----cHHHHHHHHHHHhccc--CCCccceeEEEec
Q 009208 298 AATSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG-----GEVQFQTEVETISLAV--HRNLLRLCGFCST 369 (540)
Q Consensus 298 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~ 369 (540)
...++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++++.+++ |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 34577999999999999999999864 68999999997653221 2235678999999986 5999999999999
Q ss_pred CCeeEEEEecCCC-CChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeEEc
Q 009208 370 ENERLLVYPYMPN-GSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD-EDFEAVVG 447 (540)
Q Consensus 370 ~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~ 447 (540)
.+..++|+||+.+ ++|.+++.+. ..+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999986 8999998752 4689999999999999999999999 999999999999999 78899999
Q ss_pred ccccccccCCCCCceeeccccccccccccccccCCC-CccCCeehhhHHHHHHHhCCCCCCc
Q 009208 448 DFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQS-SEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 448 Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|||+++...... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..
T Consensus 193 Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 193 DFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred eCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 999998765432 233459999999999887665 7889999999999999999999974
No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.9e-34 Score=307.76 Aligned_cols=203 Identities=28% Similarity=0.392 Sum_probs=174.6
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEEec------CCe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFCST------ENE 372 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~ 372 (540)
.++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++.+++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999874 6899999998765545556679999999999999999999998765 667
Q ss_pred eEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC---eEEccc
Q 009208 373 RLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFE---AVVGDF 449 (540)
Q Consensus 373 ~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~Df 449 (540)
.++||||+++|+|.+++... .....+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~-~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQF-ENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSS-SCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 89999999999999999863 2234688999999999999999999999 9999999999999997665 899999
Q ss_pred ccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 450 GLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 450 gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
|.+........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 169 G~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 169 GYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 99987654332 2345699999999999999999999999999999999999999964
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-33 Score=286.31 Aligned_cols=198 Identities=19% Similarity=0.294 Sum_probs=170.0
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CC-cEEEEEEeccCCccccHHHHHHHHHHHhcccCCC------ccceeEEEecCC
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DG-ALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN------LLRLCGFCSTEN 371 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~ 371 (540)
.++|.+.+.||+|+||.||+|... ++ +.||+|+++.. ......+.+|++++.+++|++ ++.+.+++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 467889999999999999999974 34 78999998753 233456888999999988766 899999999999
Q ss_pred eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-------------
Q 009208 372 ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILL------------- 438 (540)
Q Consensus 372 ~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl------------- 438 (540)
..++||||+ ++++.+++... ....+++..+..++.|+++||+|||+. +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 999999999 66777777653 234689999999999999999999999 99999999999999
Q ss_pred ------CCCCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCcc
Q 009208 439 ------DEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFG 509 (540)
Q Consensus 439 ------~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~ 509 (540)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 56789999999999864432 23346999999999999999999999999999999999999999854
No 244
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=7.6e-35 Score=292.90 Aligned_cols=192 Identities=16% Similarity=0.152 Sum_probs=160.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-------cccHHHHHHHHHHHhccc---------CCCccce
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-------AGGEVQFQTEVETISLAV---------HRNLLRL 363 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------h~nIv~l 363 (540)
.++|.+.+.||+|+||.||+|+. +|+.||||+++.... ......+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688889999999999999998 789999999986532 223367889999998886 6666666
Q ss_pred eEEE-----------------ec-------------CCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHH
Q 009208 364 CGFC-----------------ST-------------ENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTAR 413 (540)
Q Consensus 364 ~~~~-----------------~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 413 (540)
.+++ .. .+..++||||+++|++.+.+.+ ..+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 6653 22 6789999999999987776643 45899999999999999
Q ss_pred HHHHHH-hcCCCCeEecCCCCCceeeCCCC--------------------CeEEcccccccccCCCCCceeecccccccc
Q 009208 414 GLLYLH-EQCDPKIIHRDVKAANILLDEDF--------------------EAVVGDFGLAKLLDHRDSHVTTAVRGTVGH 472 (540)
Q Consensus 414 ~l~~LH-~~~~~~ivH~Dlk~~NILl~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y 472 (540)
||+||| +. +|+||||||+|||++.++ .+||+|||+++..... ...||+.|
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 88 999999999999999887 8999999999876532 23699999
Q ss_pred ccccccccCCCCccCCeehhhHH-HHHHHhCCCCCC
Q 009208 473 IAPEYLSTGQSSEKTDVFGFGIL-LLELITGQRALD 507 (540)
Q Consensus 473 ~aPE~~~~~~~~~k~Dv~S~Gvi-l~elltg~~p~~ 507 (540)
+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 9999998666 899999998766 888999999995
No 245
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.3e-33 Score=287.80 Aligned_cols=200 Identities=21% Similarity=0.299 Sum_probs=167.7
Q ss_pred hcCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccccHHHHHHHHHHHhccc-----------CCCccceeEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-----------HRNLLRLCGFC 367 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~l~~~~ 367 (540)
..+|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+|++++.+++ |+||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 35788999999999999999997 468999999987532 23456889999998876 89999999998
Q ss_pred ecCC----eeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC----
Q 009208 368 STEN----ERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLD---- 439 (540)
Q Consensus 368 ~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~---- 439 (540)
...+ ..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7544 789999999 899999997632 345899999999999999999999853 899999999999994
Q ss_pred --CCCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 440 --EDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 440 --~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||+...
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 239 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE 239 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence 4458999999999866532 223468999999999999999999999999999999999999998543
No 246
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=280.51 Aligned_cols=200 Identities=24% Similarity=0.343 Sum_probs=151.4
Q ss_pred hcCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHH-HHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQ-FQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.++|...+.||+|+||.||+|... +|+.||||+++.........+ +.++..++..++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 456888899999999999999985 689999999986543333333 444555678889999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHE-QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
||+ ++.+....... ...+++..+..++.|+++||.|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 44444444321 3468999999999999999999998 5 89999999999999999999999999997654
Q ss_pred CCCCceeeccccccccccccccc-----cCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 457 HRDSHVTTAVRGTVGHIAPEYLS-----TGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 457 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
... ......||+.|+|||++. ...++.++||||||+++|||++|+.||..
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 322 223345899999999984 45688999999999999999999999974
No 247
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=293.66 Aligned_cols=197 Identities=27% Similarity=0.361 Sum_probs=157.5
Q ss_pred hcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEEe
Q 009208 300 TSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 300 ~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~e 378 (540)
..+|...+.||+|+||+||.....+|+.||||++...... .+.+|++++.++ +||||+++++++...+..++|||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 3457788999999999976555568999999999754322 356799999998 79999999999999999999999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-----CCCeEEccccccc
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE-----DFEAVVGDFGLAK 453 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~-----~~~~kl~Dfgla~ 453 (540)
|++ |+|.+++.... ....+..+..++.|+++||.|||+. +|+||||||+|||++. ...+||+|||+++
T Consensus 99 ~~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 99 LCA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp CCS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred CCC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 996 69999987532 2344445678999999999999999 9999999999999953 3368899999998
Q ss_pred ccCCCCC--ceeeccccccccccccccc---cCCCCccCCeehhhHHHHHHHh-CCCCCC
Q 009208 454 LLDHRDS--HVTTAVRGTVGHIAPEYLS---TGQSSEKTDVFGFGILLLELIT-GQRALD 507 (540)
Q Consensus 454 ~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~k~Dv~S~Gvil~ellt-g~~p~~ 507 (540)
....... .......||+.|+|||++. ...++.++|||||||++|||+| |+.||.
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~ 231 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG 231 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTB
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 7653321 2233456999999999997 4567889999999999999999 999996
No 248
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.98 E-value=2.2e-32 Score=268.44 Aligned_cols=173 Identities=12% Similarity=0.046 Sum_probs=150.7
Q ss_pred cCCCcCCeeeeccCccEEEEEeC-CCcEEEEEEeccCCccc--cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
++|.+.+.||+|+||.||+|... +++.||||+++...... ....+.+|++.+.+++||||+++++++..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999986 48999999998654322 2357899999999999999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||+++++|.+++++. .....+..++.|+++||+|||+. +|+||||||+||++++++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999998531 34557888999999999999999 99999999999999999999998543
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCccc
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDFGR 510 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~~~ 510 (540)
|++| ++.++|||||||++|||+||+.||....
T Consensus 175 --------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 175 --------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp --------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred --------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 3332 6889999999999999999999998543
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=5.1e-33 Score=287.35 Aligned_cols=200 Identities=16% Similarity=0.122 Sum_probs=155.3
Q ss_pred cCCCcCCeeeeccCccEEEEEe-CCCcEEEEEEeccCCccc--cHHHHHHHHHHHhcccC-CCcccee---------EEE
Q 009208 301 SNFSAKNILGRGGFGIVYKGCF-SDGALVAVKRLKDYNIAG--GEVQFQTEVETISLAVH-RNLLRLC---------GFC 367 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h-~nIv~l~---------~~~ 367 (540)
.+|...+.||+|+||.||+|.+ .+|+.||||+++...... ....+.+|+.++..++| +|..... ..+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4566778999999999999996 469999999987443222 24578999999999987 3322111 111
Q ss_pred ------------ec-----CCeeEEEEecCCCCChhhhcccc---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 009208 368 ------------ST-----ENERLLVYPYMPNGSVASRLRDH---IHGRPALDWARRKRIALGTARGLLYLHEQCDPKII 427 (540)
Q Consensus 368 ------------~~-----~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~iv 427 (540)
.. ....+++|+++ +++|.+++... ......+++..+..++.|+++||+|||+. +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 11 12356677755 68999888521 22345688999999999999999999999 999
Q ss_pred ecCCCCCceeeCCCCCeEEcccccccccCCCCCceeecccccccccccccc----------ccCCCCccCCeehhhHHHH
Q 009208 428 HRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYL----------STGQSSEKTDVFGFGILLL 497 (540)
Q Consensus 428 H~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~Dv~S~Gvil~ 497 (540)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999864422 344557 999999999 5556889999999999999
Q ss_pred HHHhCCCCCCcc
Q 009208 498 ELITGQRALDFG 509 (540)
Q Consensus 498 elltg~~p~~~~ 509 (540)
||+||+.||...
T Consensus 309 elltg~~Pf~~~ 320 (413)
T 3dzo_A 309 WIWCADLPNTDD 320 (413)
T ss_dssp HHHHSSCCCCTT
T ss_pred HHHHCCCCCCCc
Confidence 999999999854
No 250
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.97 E-value=2.7e-31 Score=262.42 Aligned_cols=174 Identities=24% Similarity=0.363 Sum_probs=150.7
Q ss_pred cCCCcC-CeeeeccCccEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHH-hcccCCCccceeEEEec----CCee
Q 009208 301 SNFSAK-NILGRGGFGIVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETI-SLAVHRNLLRLCGFCST----ENER 373 (540)
Q Consensus 301 ~~~~~~-~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~----~~~~ 373 (540)
++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|++++ ...+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456665 78999999999999974 6899999998642 3577888888 56689999999999876 6678
Q ss_pred EEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEcccc
Q 009208 374 LLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDE---DFEAVVGDFG 450 (540)
Q Consensus 374 ~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~Dfg 450 (540)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 9999999999999999863 234699999999999999999999999 9999999999999998 7899999999
Q ss_pred cccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCCc
Q 009208 451 LAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALDF 508 (540)
Q Consensus 451 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~~ 508 (540)
++.... +..++.++|||||||++|||++|+.||..
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~ 200 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYS 200 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 986432 13467899999999999999999999963
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2e-30 Score=277.42 Aligned_cols=186 Identities=15% Similarity=0.057 Sum_probs=130.2
Q ss_pred eeeccCccEEEEE-eCCCcEEEEEEeccCCc---------cccHHHHHHHHHHHhcc-cCCCccceeEEEecCCeeEEEE
Q 009208 309 LGRGGFGIVYKGC-FSDGALVAVKRLKDYNI---------AGGEVQFQTEVETISLA-VHRNLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 309 lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lV~ 377 (540)
.+.|+.|.+.++. ..-|+.+|+|.+..... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4455555555433 22488999999975421 12234699999999999 6999999999999999999999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCC
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDH 457 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~ 457 (540)
||++|++|.++|.+ ..+++.. +|+.||++||+|+|++ +||||||||+|||+++++.+||+|||+|+....
T Consensus 322 Eyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 322 EKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp ECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred ecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 99999999999975 2456653 5889999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCC
Q 009208 458 RDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL 506 (540)
Q Consensus 458 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~ 506 (540)
... ......||++|+|||++.+ .+..++|+||+|++++++.++..++
T Consensus 392 ~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 392 DCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 332 2345679999999999865 4677899999999988877665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=9.8e-28 Score=255.15 Aligned_cols=186 Identities=16% Similarity=0.195 Sum_probs=148.6
Q ss_pred CcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccc-------cHHHHHHHHHHHhcccCCCccceeEEEecCCeeEEE
Q 009208 304 SAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAG-------GEVQFQTEVETISLAVHRNLLRLCGFCSTENERLLV 376 (540)
Q Consensus 304 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lV 376 (540)
...+.||+|+||.||+|.. .++.+++|+........ ..+++.+|++++.+++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999955 67889999865432211 123589999999999999999777777788888999
Q ss_pred EecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccC
Q 009208 377 YPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 377 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||+++++|.+++.+ +..++.|+++||+|||++ +|+||||||+|||+++ .+||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999874 458999999999999999 9999999999999999 99999999999775
Q ss_pred CCCCce------eecccccccccccccccc--CCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 457 HRDSHV------TTAVRGTVGHIAPEYLST--GQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 457 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
...... .....||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 432211 135569999999999977 567888999999999999998887774
No 253
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.94 E-value=4e-27 Score=233.98 Aligned_cols=171 Identities=28% Similarity=0.519 Sum_probs=157.0
Q ss_pred CCCchHHHHHHHHHHhcCCCCCccCCCCCCCCCCcc--ceeeeecCC---CcEEEecCCCCCCcc--ccCccccCCCccC
Q 009208 29 AGINYEVVALVAVKNNLHDPYNVLENWDITSVDPCS--WRMITCSPD---GYVSALGLPSQSLSG--TLSPWIGNLTKLQ 101 (540)
Q Consensus 29 ~~~~~~~~~l~~~k~~~~~~~~~~~~w~~~~~~~c~--w~gv~c~~~---~~l~~l~l~~~~l~~--~~~~~~~~l~~L~ 101 (540)
.|.+.|+.||++||.++.||. .+++|+. +.+||. |.||+|+.. ++|+.|+|++|+++| .+|+.|+++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 477889999999999999887 7899974 578998 999999864 799999999999999 9999999999999
Q ss_pred EEEccc-CCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccC
Q 009208 102 SVLLQN-NAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYN 180 (540)
Q Consensus 102 ~L~l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (540)
+|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|++++.+|..+..+++|++|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999994 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCc------ccccccCCCC
Q 009208 181 NLSGSLPKISA------RTFKVTGNPL 201 (540)
Q Consensus 181 ~l~~~~p~~~~------~~~~~~~n~~ 201 (540)
++++.+|.... +.+++++|.+
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l 186 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCee
Confidence 99988886432 4567777765
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=5.3e-24 Score=207.82 Aligned_cols=166 Identities=12% Similarity=0.048 Sum_probs=129.1
Q ss_pred HHHHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCcc-----------------ccHHHHHHHHHHHhcc
Q 009208 293 FKELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIA-----------------GGEVQFQTEVETISLA 355 (540)
Q Consensus 293 ~~~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l 355 (540)
+..+......|.+.+.||+|+||.||+|...+|+.||+|.++..... .....+.+|++++.++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 34455555667778999999999999999977999999998643211 1245689999999999
Q ss_pred cCCCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 009208 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (540)
Q Consensus 356 ~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~N 435 (540)
+ | +++.+++. .+..++||||+++|+|.+ +.. .....++.|+++||.|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYA-WEGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEE-EETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEe-ccceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 8 5 66666553 356799999999999988 531 12346999999999999999 99999999999
Q ss_pred eeeCCCCCeEEcccccccccCCCCCceeecccccccccccccccc----------CCCCccCCeeh
Q 009208 436 ILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLST----------GQSSEKTDVFG 491 (540)
Q Consensus 436 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~k~Dv~S 491 (540)
||++ ++.+||+|||+++. +..|.|||++.. ..+..++|+|.
T Consensus 224 ILl~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVE--------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EEEE-TTEEEECCCTTCEE--------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEEE-CCcEEEEECCCCeE--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9999 99999999999963 345688998753 34555666654
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.90 E-value=3.9e-24 Score=238.13 Aligned_cols=153 Identities=31% Similarity=0.486 Sum_probs=92.7
Q ss_pred CCCCCchHHHHHHHHHHhcCCCCCccCCCCCCCCCCccceeeeecCCCcEEEecCCCCCCccc---cCccccCCCccCEE
Q 009208 27 SPAGINYEVVALVAVKNNLHDPYNVLENWDITSVDPCSWRMITCSPDGYVSALGLPSQSLSGT---LSPWIGNLTKLQSV 103 (540)
Q Consensus 27 ~~~~~~~~~~~l~~~k~~~~~~~~~~~~w~~~~~~~c~w~gv~c~~~~~l~~l~l~~~~l~~~---~~~~~~~l~~L~~L 103 (540)
++++.+.|+.||++||+++.||. .+++|+ ++.|||.|+||+|+ .++|+.|+|+++.+.|. +|+.+.+|++|+.+
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~-~l~~W~-~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKN-LLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTT-SSTTCC-TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcc-cccCCC-CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 34446789999999999999998 899997 56899999999999 78999999999999987 66544444444444
Q ss_pred EcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCc--cccCCCCcchhhccCccCCCCCCccc-cCCccccEEecccC
Q 009208 104 LLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD--SLGDLGNLNYLRLNNNSLTGSCPESL-SKIESLTLVDLSYN 180 (540)
Q Consensus 104 ~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N 180 (540)
+++.|.+. .+|+.|+++++|++|||++|+++|.+|. .++++++|++|+|++|++++.+|..+ .++++|++|++++|
T Consensus 83 ~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 83 FLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp ECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred CCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 44444433 2333444444444444444444444444 44444444444444444443333332 33333444444443
Q ss_pred ccc
Q 009208 181 NLS 183 (540)
Q Consensus 181 ~l~ 183 (540)
+++
T Consensus 162 ~l~ 164 (768)
T 3rgz_A 162 SIS 164 (768)
T ss_dssp CCE
T ss_pred ccC
Confidence 333
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=8e-24 Score=235.33 Aligned_cols=171 Identities=24% Similarity=0.314 Sum_probs=150.4
Q ss_pred CCCCchHHHHHHHHHHhcCCCCCccCCCCCCC----CCC--ccc------------eeeeecCCCcEEEecCCCCCCccc
Q 009208 28 PAGINYEVVALVAVKNNLHDPYNVLENWDITS----VDP--CSW------------RMITCSPDGYVSALGLPSQSLSGT 89 (540)
Q Consensus 28 ~~~~~~~~~~l~~~k~~~~~~~~~~~~w~~~~----~~~--c~w------------~gv~c~~~~~l~~l~l~~~~l~~~ 89 (540)
.+....|+.||++||+++.+| +|+.++ .+| |.| .||+|+..++|+.|+|++|+|+|.
T Consensus 264 ~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 264 TAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEE
T ss_pred cccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCc
Confidence 344567899999999999887 797654 466 999 999999889999999999999999
Q ss_pred cCccccCCCccCEEEc-ccCCCCCC-------------------------------------------------------
Q 009208 90 LSPWIGNLTKLQSVLL-QNNAILGP------------------------------------------------------- 113 (540)
Q Consensus 90 ~~~~~~~l~~L~~L~l-~~N~l~~~------------------------------------------------------- 113 (540)
+|++|++|++|+.|+| ++|.++|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 77765444
Q ss_pred ---------------------CCcccCCCCcccEEEeeCCCCcc-----------------cCCcccc--CCCCcchhhc
Q 009208 114 ---------------------IPASLGKLEKLQTLDLSNNKFTG-----------------EIPDSLG--DLGNLNYLRL 153 (540)
Q Consensus 114 ---------------------~p~~~~~l~~L~~L~ls~N~l~~-----------------~~p~~~~--~l~~L~~L~l 153 (540)
+|..|+++++|++|+|++|+|+| .+|+.++ ++++|++|+|
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~L 498 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVEL 498 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred cccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEEC
Confidence 88899999999999999999998 3999988 9999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCc-ccc-cCCCC------------CcccccccCCCCCc
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNN-LSG-SLPKI------------SARTFKVTGNPLIC 203 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~------------~~~~~~~~~n~~~~ 203 (540)
++|++.+.+|..|.++++|+.|+|++|+ ++| .+|.. ..+.+++++|.+..
T Consensus 499 s~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ 562 (876)
T 4ecn_A 499 YNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE 562 (876)
T ss_dssp ESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB
T ss_pred cCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCc
Confidence 9999999999999999999999999998 998 66642 23567888888763
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.88 E-value=2.1e-23 Score=227.08 Aligned_cols=172 Identities=22% Similarity=0.346 Sum_probs=150.3
Q ss_pred CCchHHHHHHHHHHhcCCC-CC-------ccCCCCCCCCCCccc---eeeeecCCCcEEEecCCCCCCccccCccccCCC
Q 009208 30 GINYEVVALVAVKNNLHDP-YN-------VLENWDITSVDPCSW---RMITCSPDGYVSALGLPSQSLSGTLSPWIGNLT 98 (540)
Q Consensus 30 ~~~~~~~~l~~~k~~~~~~-~~-------~~~~w~~~~~~~c~w---~gv~c~~~~~l~~l~l~~~~l~~~~~~~~~~l~ 98 (540)
....|+.||.++|.++++| +. ..++|+. +.+||.| .||+|+..++|+.|+|++++++|.+|+++++|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~ 105 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLT 105 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCT
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCc
Confidence 3446889999999998654 22 3458984 6899999 999999889999999999999999999999999
Q ss_pred ccCEEEcccCC---------------------------------------------------------------------
Q 009208 99 KLQSVLLQNNA--------------------------------------------------------------------- 109 (540)
Q Consensus 99 ~L~~L~l~~N~--------------------------------------------------------------------- 109 (540)
+|++|+|++|.
T Consensus 106 ~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~ 185 (636)
T 4eco_A 106 ELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKD 185 (636)
T ss_dssp TCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCT
T ss_pred cceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhh
Confidence 99999999884
Q ss_pred ---------CCCCCCcccCCCCcccEEEeeCCCCccc-----------------CCcccc--CCCCcchhhccCccCCCC
Q 009208 110 ---------ILGPIPASLGKLEKLQTLDLSNNKFTGE-----------------IPDSLG--DLGNLNYLRLNNNSLTGS 161 (540)
Q Consensus 110 ---------l~~~~p~~~~~l~~L~~L~ls~N~l~~~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~ 161 (540)
++| +|+.|+++++|++|+|++|+|+|. +|+.++ ++++|++|+|++|++.+.
T Consensus 186 l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~ 264 (636)
T 4eco_A 186 TQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTK 264 (636)
T ss_dssp TTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSS
T ss_pred hhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCcc
Confidence 445 889999999999999999999986 999999 999999999999999999
Q ss_pred CCccccCCccccEEecccCc-ccc-cCCCC-----------CcccccccCCCCCc
Q 009208 162 CPESLSKIESLTLVDLSYNN-LSG-SLPKI-----------SARTFKVTGNPLIC 203 (540)
Q Consensus 162 ~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~-----------~~~~~~~~~n~~~~ 203 (540)
+|..|.++++|+.|++++|+ ++| .+|.. ..+.+++++|.+..
T Consensus 265 ~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ 319 (636)
T 4eco_A 265 LPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKT 319 (636)
T ss_dssp CCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSS
T ss_pred ChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCc
Confidence 99999999999999999999 998 77752 23567888888763
No 258
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=1.8e-21 Score=184.09 Aligned_cols=148 Identities=22% Similarity=0.260 Sum_probs=131.3
Q ss_pred CCCCCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEE
Q 009208 58 TSVDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTL 127 (540)
Q Consensus 58 ~~~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 127 (540)
.+.+.|+|++|.|+.. ..++.|+|++|.|++..|..|.++++|++|+|++|+|++..+..|.++++|++|
T Consensus 14 ~~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp CTTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 4678899999999842 369999999999999889999999999999999999997666778999999999
Q ss_pred EeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 128 DLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 128 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.... +.+.+.+|++.
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 99999999666666899999999999999999 8999999999999999999999976655332 56789999999
Q ss_pred cCCC
Q 009208 203 CGPK 206 (540)
Q Consensus 203 ~~~~ 206 (540)
|.+.
T Consensus 173 c~c~ 176 (229)
T 3e6j_A 173 CECR 176 (229)
T ss_dssp TTBG
T ss_pred CCcc
Confidence 8764
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=5.1e-22 Score=198.41 Aligned_cols=175 Identities=19% Similarity=0.272 Sum_probs=150.1
Q ss_pred ccCCCCCchHHHHHHHHHHhc-CCCCCccCCCC---CCCCCCccceeeeec---------CCCcEEEecCCCCCCccccC
Q 009208 25 TLSPAGINYEVVALVAVKNNL-HDPYNVLENWD---ITSVDPCSWRMITCS---------PDGYVSALGLPSQSLSGTLS 91 (540)
Q Consensus 25 ~~~~~~~~~~~~~l~~~k~~~-~~~~~~~~~w~---~~~~~~c~w~gv~c~---------~~~~l~~l~l~~~~l~~~~~ 91 (540)
....+....++.||++||.++ .||.+.+.+|. ....++|.|.|++|. ...+|+.|+|++|+++ .+|
T Consensus 19 ~~~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp 97 (328)
T 4fcg_A 19 FQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFP 97 (328)
T ss_dssp CC--CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCC
T ss_pred eeccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcC
Confidence 344566778999999999998 68877888994 346789999999995 2368999999999999 889
Q ss_pred ccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccC---
Q 009208 92 PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSK--- 168 (540)
Q Consensus 92 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~--- 168 (540)
+.++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 98 ~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~ 175 (328)
T 4fcg_A 98 DQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDA 175 (328)
T ss_dssp SCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-
T ss_pred hhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccc
Confidence 99999999999999999999 89999999999999999999999 89999999999999999999998899987765
Q ss_pred ------CccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 169 ------IESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 169 ------l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
+++|+.|++++|+++ .+|.... +.+++++|.+..
T Consensus 176 ~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 176 SGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred hhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 999999999999998 6665322 567788887753
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=1e-20 Score=177.70 Aligned_cols=147 Identities=23% Similarity=0.312 Sum_probs=129.9
Q ss_pred CCCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEe
Q 009208 60 VDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (540)
Q Consensus 60 ~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 129 (540)
...|.|..|.|+.. ..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEEC
T ss_pred CCEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEEC
Confidence 34578999999742 36999999999999877789999999999999999999888999999999999999
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcC
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (540)
++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+.... +.+++.+|+|.|+
T Consensus 88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999944445578999999999999999988899999999999999999999987776432 5678999999997
Q ss_pred CC
Q 009208 205 PK 206 (540)
Q Consensus 205 ~~ 206 (540)
|.
T Consensus 168 c~ 169 (220)
T 2v9t_B 168 CH 169 (220)
T ss_dssp GG
T ss_pred Cc
Confidence 64
No 261
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=3.1e-20 Score=174.42 Aligned_cols=147 Identities=20% Similarity=0.279 Sum_probs=130.1
Q ss_pred CCCccceeeeecCC----------CcEEEecCCCCCCccccC-ccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEE
Q 009208 60 VDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLS-PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLD 128 (540)
Q Consensus 60 ~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 128 (540)
..-|.|+.+.|+.. ..++.|+|++|.|++..+ ..|.++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 34578999999742 257899999999998755 4689999999999999999988888999999999999
Q ss_pred eeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 129 LSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 129 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|.... +.+++++|++.|
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 999999977777799999999999999999988899999999999999999999988776543 567899999999
Q ss_pred CCC
Q 009208 204 GPK 206 (540)
Q Consensus 204 ~~~ 206 (540)
.+.
T Consensus 168 ~c~ 170 (220)
T 2v70_A 168 NCY 170 (220)
T ss_dssp SGG
T ss_pred CCc
Confidence 765
No 262
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1e-19 Score=169.33 Aligned_cols=147 Identities=23% Similarity=0.262 Sum_probs=127.2
Q ss_pred CCCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEe
Q 009208 60 VDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (540)
Q Consensus 60 ~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 129 (540)
...|.|.+|.|+.. .+++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 34589999999753 36999999999999777778899999999999999999777777899999999999
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcC
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (540)
++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++.++.... +.+++.+|++.|.
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 99999966566689999999999999999977777789999999999999999977665332 5678999999887
Q ss_pred CC
Q 009208 205 PK 206 (540)
Q Consensus 205 ~~ 206 (540)
++
T Consensus 164 ~~ 165 (208)
T 2o6s_A 164 CP 165 (208)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 263
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=1.1e-19 Score=175.02 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=106.1
Q ss_pred CCcCCeeeeccCccEEEEEe-CCCcE--EEEEEeccCCcc-----------------------ccHHHHHHHHHHHhccc
Q 009208 303 FSAKNILGRGGFGIVYKGCF-SDGAL--VAVKRLKDYNIA-----------------------GGEVQFQTEVETISLAV 356 (540)
Q Consensus 303 ~~~~~~lG~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 356 (540)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|++.+.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55778999999999999998 68888 999997643211 01135789999999998
Q ss_pred CCCc--cceeEEEecCCeeEEEEecCCC-C----ChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEe
Q 009208 357 HRNL--LRLCGFCSTENERLLVYPYMPN-G----SVASRLRDHIHGRPALDWARRKRIALGTARGLLYLH-EQCDPKIIH 428 (540)
Q Consensus 357 h~nI--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH 428 (540)
|+++ ..++.+ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8865 333332 357899999942 5 55544322 224456789999999999999 88 9999
Q ss_pred cCCCCCceeeCCCCCeEEcccccccccC
Q 009208 429 RDVKAANILLDEDFEAVVGDFGLAKLLD 456 (540)
Q Consensus 429 ~Dlk~~NILl~~~~~~kl~Dfgla~~~~ 456 (540)
|||||+|||+++ .++|+|||++....
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999998 99999999998654
No 264
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=6.5e-19 Score=161.70 Aligned_cols=147 Identities=23% Similarity=0.309 Sum_probs=121.5
Q ss_pred CCCccceeeeecCC----------CcEEEecCCCCCCccccCc-cccCCCccCEEEcccCCCCCCCCcccCCCCcccEEE
Q 009208 60 VDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSP-WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLD 128 (540)
Q Consensus 60 ~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 128 (540)
...|.|+.+.|+.. ..++.|+|++|.|++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 34578999999743 2789999999999866654 489999999999999999988899999999999999
Q ss_pred eeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcC
Q 009208 129 LSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (540)
Q Consensus 129 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (540)
|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+-... +...+.++...|.
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 999999987788899999999999999999988899999999999999999999987653211 1223455555665
Q ss_pred CC
Q 009208 205 PK 206 (540)
Q Consensus 205 ~~ 206 (540)
.+
T Consensus 165 ~P 166 (192)
T 1w8a_A 165 AP 166 (192)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.76 E-value=7.1e-19 Score=195.71 Aligned_cols=135 Identities=35% Similarity=0.583 Sum_probs=124.7
Q ss_pred EEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCc
Q 009208 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (540)
Q Consensus 77 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (540)
..++++.|.++|.+|..++++++|+.|+|++|+++|.+|.+|+++++|+.|+|++|+|+|.+|..++++++|+.|||++|
T Consensus 611 ~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 34677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcCCCCCCCCc
Q 009208 157 SLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGPKATNNCT 212 (540)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~~~~~~c~ 212 (540)
+++|.+|..+..+++|++|++++|+++|.||.... ...++.||+.+|+.+.. .|.
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~ 749 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCD 749 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCC
T ss_pred cccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCC
Confidence 99999999999999999999999999999998643 34578999999998754 564
No 266
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.74 E-value=3.9e-18 Score=163.48 Aligned_cols=128 Identities=23% Similarity=0.239 Sum_probs=107.4
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 58889999999998888889999999999999999998888888999999999999999996666778889999999999
Q ss_pred CccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
+|+|++..+..|..+++|+.|+|++|+|++.+|.... +.+++++|.+.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 9999866666678899999999999999876664322 56778888764
No 267
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.74 E-value=4.4e-18 Score=153.91 Aligned_cols=128 Identities=27% Similarity=0.297 Sum_probs=104.9
Q ss_pred CCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEee
Q 009208 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLS 130 (540)
Q Consensus 61 ~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 130 (540)
..|+|++|.|+.. ..++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 5 C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp CEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 4578999999742 368889999999887666678888999999999999987666678889999999999
Q ss_pred CCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCC
Q 009208 131 NNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
+|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++.+|.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 9999866566678889999999999999855555568888999999999998887764
No 268
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.74 E-value=8.4e-20 Score=192.19 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=74.2
Q ss_pred cceeeeecCCCcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccC-CCCcccEEEeeCCCCcccCCccc
Q 009208 64 SWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLG-KLEKLQTLDLSNNKFTGEIPDSL 142 (540)
Q Consensus 64 ~w~gv~c~~~~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~ 142 (540)
.+.++.|..-..++.|+|++|.|++..|..++++++|+.|+|++|.+++.+|..+. ++++|++|+|++|+|++. |. +
T Consensus 110 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~ 187 (487)
T 3oja_A 110 NISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-Q 187 (487)
T ss_dssp CCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-C
T ss_pred cCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-c
Confidence 34444444334556666666666655555566666666666666666655555554 456666666666666533 22 2
Q ss_pred cCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCC----cccccccCCCCCcC
Q 009208 143 GDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS----ARTFKVTGNPLICG 204 (540)
Q Consensus 143 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~~~~~~~n~~~~~ 204 (540)
..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|+|++.++.+. ...+++++|++.|+
T Consensus 188 ~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 188 VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred ccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 245666666666666663 33345566666666666666664222221 13345555655543
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.73 E-value=1.2e-17 Score=160.04 Aligned_cols=131 Identities=24% Similarity=0.285 Sum_probs=117.8
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 47999999999999888888999999999999999999888888999999999999999999666666899999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (540)
++|+|++..+..|..+++|+.|+|++|+|++.+|.... +.+++.+|++.|.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999976666899999999999999999977775432 5678999999887
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1e-17 Score=153.68 Aligned_cols=127 Identities=20% Similarity=0.333 Sum_probs=113.4
Q ss_pred EEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCc-ccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccC
Q 009208 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPA-SLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (540)
Q Consensus 77 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (540)
+.+++++|+|+ .+|..+.. +|++|+|++|+|++..|. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67999999997 78877654 999999999999976664 489999999999999999988899999999999999999
Q ss_pred ccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
|+|++..|..|..+++|+.|+|++|+|++.+|.... +.+++++|++.|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999988888899999999999999999998886543 567899999988764
No 271
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.72 E-value=3.4e-18 Score=169.49 Aligned_cols=132 Identities=27% Similarity=0.455 Sum_probs=94.3
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|+|++|.+++.+|..+..++ |++|+|++|.+++.+|..|.++++|+.|+|++|++++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 344555555555555555555554 55555555555555666666777777777777777755544 6778888888888
Q ss_pred CccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcCCCCC
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGPKAT 208 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~~~~ 208 (540)
+|++++.+|..+..+++|+.|++++|+++|.+|.... +.+++.+|++.|+.+..
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 8888888888899999999999999999998888632 56788999988986543
No 272
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.71 E-value=3.5e-17 Score=158.78 Aligned_cols=133 Identities=22% Similarity=0.236 Sum_probs=91.5
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|++
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 35777777777777655666677777777777777777666666777777777777777777555555677777777777
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
++|++++..+..+..+++|+.|++++|++++.+|.... +.+++.+|++.|.++
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 77777765555667777777777777777766654322 446677777766543
No 273
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.71 E-value=3.5e-17 Score=158.60 Aligned_cols=128 Identities=27% Similarity=0.330 Sum_probs=88.6
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 46777777777776555677777777777777777775555556777777777777777775444556777777777777
Q ss_pred CccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
+|++++..|..|..+++|++|++++|++++..+.... +.+++++|.+.
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 170 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc
Confidence 7777766666677777777777777777755444221 44566666553
No 274
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.71 E-value=1.1e-17 Score=169.31 Aligned_cols=127 Identities=27% Similarity=0.325 Sum_probs=102.0
Q ss_pred CCccceeeeecCC----------CcEEEecCCCCCCccccCcccc-CCCccCEEEcccCCCCCCCCcccCCCCcccEEEe
Q 009208 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIG-NLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (540)
Q Consensus 61 ~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 129 (540)
.-|.+..|.|+.. ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..|..|.++++|++|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 3467888888642 3578899999999877777777 8889999999999988777778888888999999
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCC
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLP 187 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 187 (540)
++|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 8888886666678888888888888888887667788888888888888888875433
No 275
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=3e-17 Score=150.56 Aligned_cols=124 Identities=24% Similarity=0.344 Sum_probs=87.4
Q ss_pred ecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccC
Q 009208 79 LGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSL 158 (540)
Q Consensus 79 l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 158 (540)
+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 445566666 5565443 57777788888777 6677777777888888888887766666677777888888888887
Q ss_pred CCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 159 TGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 159 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
++..|..|..+++|+.|+|++|+|++..+..+. +.+++.+|+|.|+|.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 766666777777888888888877755554322 456777888877654
No 276
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=2.6e-17 Score=150.98 Aligned_cols=125 Identities=22% Similarity=0.281 Sum_probs=112.3
Q ss_pred CCCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEe
Q 009208 60 VDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (540)
Q Consensus 60 ~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 129 (540)
...|.|..|.|+.. ..++.|+|++|.|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|++|+|
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~L 85 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLIL 85 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEEC
Confidence 34577888888742 37999999999998 78899999999999999999999888889999999999999
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCccccc
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGS 185 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 185 (540)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99999977777899999999999999999965556799999999999999999854
No 277
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=8.3e-18 Score=168.41 Aligned_cols=148 Identities=14% Similarity=0.106 Sum_probs=102.5
Q ss_pred HHHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCc-------------cccHHHHH--------HHHHHHh
Q 009208 295 ELRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNI-------------AGGEVQFQ--------TEVETIS 353 (540)
Q Consensus 295 ~l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-------------~~~~~~~~--------~E~~~l~ 353 (540)
.+.....-|.+.+.||+|++|.||+|...+|+.||||+++.... ........ +|...+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 33333344888999999999999999999999999999764211 01112222 3444444
Q ss_pred cccCCCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 009208 354 LAVHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKA 433 (540)
Q Consensus 354 ~l~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~ 433 (540)
++.+.++.-..-+.. ...++||||+++++|...... .....++.|++.+|.|||+. +||||||||
T Consensus 169 rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp 233 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNE 233 (397)
T ss_dssp HHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCST
T ss_pred HHHhcCCCCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCH
Confidence 443333221111111 234799999999887665421 12356789999999999998 999999999
Q ss_pred CceeeCCCCC----------eEEcccccccccCC
Q 009208 434 ANILLDEDFE----------AVVGDFGLAKLLDH 457 (540)
Q Consensus 434 ~NILl~~~~~----------~kl~Dfgla~~~~~ 457 (540)
.|||+++++. +.|+||+-+....+
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~h 267 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSMDH 267 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEETTS
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccCCC
Confidence 9999998763 89999998765443
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=4.9e-17 Score=159.21 Aligned_cols=131 Identities=25% Similarity=0.229 Sum_probs=97.5
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|+|++|.|+ .+|..+.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 36777788888777 67777788888888888888888666677888888888888888888555556777888888888
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICGP 205 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~~ 205 (540)
++|+|++..+..|..+++|+.|+|++|+|+..++.+.. +.+.+.+|||.|.|
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 88888854445567788888888888888843333221 45677888888875
No 279
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=9.2e-17 Score=155.65 Aligned_cols=110 Identities=23% Similarity=0.275 Sum_probs=52.5
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
+++.|+|++|.++...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 62 ~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 141 (270)
T 2o6q_A 62 KLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLG 141 (270)
T ss_dssp TCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECC
Confidence 45555555555553333334455555555555555554444444445555555555555553333344444555555555
Q ss_pred CccCCCCCCccccCCccccEEecccCcccc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
+|++++..+..|..+++|+.|++++|++++
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 554443333334444444444444444443
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.69 E-value=4.8e-17 Score=176.81 Aligned_cols=131 Identities=18% Similarity=0.141 Sum_probs=114.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|||++|.|++..+.+|.++++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 37999999999999877789999999999999999999887889999999999999999999655567999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccc-cCCCCCc-----ccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~~~ 204 (540)
++|++++..+..|+++++|++|++++|++++ .+|.... +.+++.+|.+...
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccc
Confidence 9999997667789999999999999999986 3455432 5678888887543
No 281
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=149.78 Aligned_cols=114 Identities=20% Similarity=0.255 Sum_probs=107.6
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 47999999999999888889999999999999999999888888999999999999999999888999999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLP 187 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 187 (540)
++|+|++..|..|..+++|+.|++++|++++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999998889999999999999999999997654
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=1.2e-16 Score=166.83 Aligned_cols=133 Identities=21% Similarity=0.212 Sum_probs=122.6
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|+|++|.+++..|..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 37999999999999999999999999999999999999888999999999999999999999877889999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
++|++++..|..|..+++|+.|++++|+|++.++.... +.+++++|++.|.++
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 99999988899999999999999999999976665432 567899999999876
No 283
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.66 E-value=7.6e-17 Score=157.48 Aligned_cols=114 Identities=24% Similarity=0.295 Sum_probs=62.7
Q ss_pred cEEEecCCCCC-CccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 75 YVSALGLPSQS-LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 75 ~l~~l~l~~~~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
+++.|+|++|. ++...|..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..+..+++|++|+|
T Consensus 81 ~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 160 (285)
T 1ozn_A 81 LLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFL 160 (285)
T ss_dssp TCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEEC
Confidence 45566666664 54444555555666666666666665555555555556666666666555333344555555555555
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
++|++++..+..+..+++|+.|++++|++++..|.
T Consensus 161 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 195 (285)
T 1ozn_A 161 HGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccccCHHHhcCccccCEEECCCCcccccCHh
Confidence 55555533333455555555555555555544443
No 284
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.65 E-value=1.5e-16 Score=157.12 Aligned_cols=110 Identities=21% Similarity=0.324 Sum_probs=55.2
Q ss_pred cEEEecCCCCCCccccC-ccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcc-cCCccccCCCCcchhh
Q 009208 75 YVSALGLPSQSLSGTLS-PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG-EIPDSLGDLGNLNYLR 152 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ 152 (540)
+++.|+|++|.+++..+ ..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 102 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 181 (306)
T 2z66_A 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 181 (306)
T ss_dssp TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEE
Confidence 45555555555553332 345555555555555555554444445555555555555555543 3444455555555555
Q ss_pred ccCccCCCCCCccccCCccccEEecccCcccc
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
|++|++++..|..+..+++|+.|++++|++++
T Consensus 182 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 213 (306)
T 2z66_A 182 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213 (306)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCSB
T ss_pred CCCCCcCCcCHHHhcCCCCCCEEECCCCccCc
Confidence 55555554444445555555555555555543
No 285
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=4.7e-16 Score=140.53 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=109.3
Q ss_pred EEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccC
Q 009208 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (540)
Q Consensus 76 l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (540)
.+.+++++++++ .+|..+ .++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467899999998 566554 37999999999999977777889999999999999999966566689999999999999
Q ss_pred ccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
|++++..+..+..+++|+.|++++|+|++.++.... +.+++.+|++.|.++
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999977777789999999999999999976665432 567899999988653
No 286
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.6e-16 Score=139.27 Aligned_cols=125 Identities=25% Similarity=0.279 Sum_probs=108.3
Q ss_pred CcEEEecCCCCCCc-cccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLS-GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 152 (540)
.+++.|+|++|.++ +.+|..+.++++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 47999999999998 78999999999999999999999965 7899999999999999999977888888899999999
Q ss_pred ccCccCCCCCC--ccccCCccccEEecccCcccccCC---CCC-----cccccccCCCC
Q 009208 153 LNNNSLTGSCP--ESLSKIESLTLVDLSYNNLSGSLP---KIS-----ARTFKVTGNPL 201 (540)
Q Consensus 153 l~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p---~~~-----~~~~~~~~n~~ 201 (540)
|++|++++ +| ..+..+++|+.|++++|++++..+ ... .+.+++.+|..
T Consensus 102 Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999995 44 789999999999999999997655 111 14566666665
No 287
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.63 E-value=7e-16 Score=138.41 Aligned_cols=110 Identities=27% Similarity=0.322 Sum_probs=96.4
Q ss_pred EEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCc
Q 009208 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (540)
Q Consensus 77 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (540)
+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 35667788888 5777663 89999999999999888999999999999999999999666666899999999999999
Q ss_pred cCCCCCCccccCCccccEEecccCcccccCCCC
Q 009208 157 SLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI 189 (540)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (540)
+|++..+..|..+++|+.|+|++|+++...+++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l 121 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDI 121 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhH
Confidence 999766667999999999999999999776644
No 288
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.63 E-value=7.4e-16 Score=144.43 Aligned_cols=112 Identities=25% Similarity=0.261 Sum_probs=104.3
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 47999999999999888999999999999999999999666667899999999999999999888899999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCccccc
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGS 185 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 185 (540)
++|+|++..+..|..+++|+.|+|++|++...
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999977777899999999999999999853
No 289
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.3e-16 Score=157.85 Aligned_cols=140 Identities=22% Similarity=0.298 Sum_probs=116.7
Q ss_pred CCCccceeeeecC------------CCcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEE
Q 009208 60 VDPCSWRMITCSP------------DGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTL 127 (540)
Q Consensus 60 ~~~c~w~gv~c~~------------~~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 127 (540)
..+|.|.|+ |+. ..+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 466888776 542 1379999999999997767799999999999999999998888899999999999
Q ss_pred EeeCCCCcccCCcc-ccCCCCcchhhccCccCCCCCCc--cccCCccccEEecccCc-ccccCCCCCc-----ccccccC
Q 009208 128 DLSNNKFTGEIPDS-LGDLGNLNYLRLNNNSLTGSCPE--SLSKIESLTLVDLSYNN-LSGSLPKISA-----RTFKVTG 198 (540)
Q Consensus 128 ~ls~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~-l~~~~p~~~~-----~~~~~~~ 198 (540)
+|++|+++ .+|.. +.++++|++|+|++|+++ .+|. .+..+++|+.|++++|+ +++..|.... +.+++++
T Consensus 106 ~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~ 183 (353)
T 2z80_A 106 DLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDA 183 (353)
T ss_dssp ECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEE
T ss_pred ECCCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCC
Confidence 99999999 55554 899999999999999999 5555 78999999999999995 6655454332 5567888
Q ss_pred CCCC
Q 009208 199 NPLI 202 (540)
Q Consensus 199 n~~~ 202 (540)
|.+.
T Consensus 184 n~l~ 187 (353)
T 2z80_A 184 SDLQ 187 (353)
T ss_dssp TTCC
T ss_pred CCcC
Confidence 8763
No 290
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.62 E-value=1e-15 Score=148.69 Aligned_cols=127 Identities=18% Similarity=0.175 Sum_probs=106.7
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58999999999997777789999999999999999997777789999999999999999997777889999999999999
Q ss_pred CccCCCCCCccccCCccccEEecccCcccc-cCCCCCc-----ccccccCCCC
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPL 201 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~ 201 (540)
+|++++..+..+..+++|+.|++++|++++ .+|.... +.+++++|.+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l 161 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCC
Confidence 999987666678899999999999999986 3465332 4567777765
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.62 E-value=1.1e-15 Score=149.16 Aligned_cols=129 Identities=21% Similarity=0.230 Sum_probs=113.0
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCC-CcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK-FTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L~ 152 (540)
..++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+ ++...|..+..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 479999999999998777889999999999999999998889999999999999999997 8855588899999999999
Q ss_pred ccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
|++|++++..|..+..+++|++|++++|++++..+.... +.+++++|.+.
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccc
Confidence 999999987788899999999999999999976665332 56778888764
No 292
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.62 E-value=6.1e-16 Score=161.38 Aligned_cols=143 Identities=22% Similarity=0.233 Sum_probs=122.2
Q ss_pred CCcccee--eeecCC---------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCC-CcccCCCCcccEEE
Q 009208 61 DPCSWRM--ITCSPD---------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPI-PASLGKLEKLQTLD 128 (540)
Q Consensus 61 ~~c~w~g--v~c~~~---------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~ 128 (540)
..|.|.+ |.|+.. .+++.|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4465555 788642 46999999999999888999999999999999999998655 56799999999999
Q ss_pred eeCCCCcccCCccccCCCCcchhhccCccCCCCCCcc--ccCCccccEEecccCcccccCCCC-Cc-----ccccccCCC
Q 009208 129 LSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPES--LSKIESLTLVDLSYNNLSGSLPKI-SA-----RTFKVTGNP 200 (540)
Q Consensus 129 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~-----~~~~~~~n~ 200 (540)
|++|++++..|..|.++++|++|+|++|++++.+|.. +..+++|+.|++++|++++..|.. .. +.+++++|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999766555 999999999999999999887763 11 567888888
Q ss_pred CCc
Q 009208 201 LIC 203 (540)
Q Consensus 201 ~~~ 203 (540)
+..
T Consensus 166 l~~ 168 (455)
T 3v47_A 166 VKS 168 (455)
T ss_dssp BSC
T ss_pred ccc
Confidence 744
No 293
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.61 E-value=1.1e-15 Score=165.59 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=108.5
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 47889999999999877788999999999999999999877888999999999999999998777888999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccc-cCCCCCc-----ccccccCCCCCc
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~~ 203 (540)
++|++++..|..++++++|++|++++|++++ .+|.... +.+++++|.+..
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 9999986666788888899999999998875 5565432 556777776643
No 294
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=5.6e-16 Score=168.34 Aligned_cols=133 Identities=19% Similarity=0.261 Sum_probs=120.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCC-CCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAIL-GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 152 (540)
..++.++++.|.+++..+..+..+++|+.|+|++|++. +.+|..|..+++|++|+|++|+|++..|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 36788999999999989999999999999999999754 46788999999999999999999988899999999999999
Q ss_pred ccCccCCCCCCccccCCccccEEecccCcccccCCCCCc------ccccccCCCCCcCCC
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA------RTFKVTGNPLICGPK 206 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~------~~~~~~~n~~~~~~~ 206 (540)
|++|+|++..|..|..+++|+.|+|++|+|++.+|.... +.+++++|||.|+|.
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999988888999999999999999999998887532 457899999999875
No 295
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.61 E-value=2e-15 Score=140.08 Aligned_cols=126 Identities=23% Similarity=0.222 Sum_probs=109.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 47999999999999766677899999999999999999777777899999999999999999666666899999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCcccccccCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISARTFKVTGNPL 201 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~n~~ 201 (540)
++|++++..+..+..+++|+.|++++|++.+..|.+ +.+.+.+|.+
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l--~~L~~~~n~~ 177 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI--RYLSEWINKH 177 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTTT--HHHHHHHHHC
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCCCH--HHHHHHHHhC
Confidence 999999766667899999999999999999988865 3444455544
No 296
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.61 E-value=1.8e-15 Score=136.19 Aligned_cols=110 Identities=26% Similarity=0.286 Sum_probs=96.8
Q ss_pred EEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCc
Q 009208 77 SALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (540)
Q Consensus 77 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (540)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999997 7887775 89999999999999988999999999999999999999554455789999999999999
Q ss_pred cCCCCCCccccCCccccEEecccCcccccCCCC
Q 009208 157 SLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI 189 (540)
Q Consensus 157 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (540)
+|++..+..|..+++|+.|+|++|++....+++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 999655556999999999999999999765543
No 297
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=6.1e-16 Score=135.50 Aligned_cols=112 Identities=27% Similarity=0.309 Sum_probs=102.2
Q ss_pred CcEEEecCCCCCCc-cccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLS-GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 152 (540)
.+++.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 47899999999998 88999999999999999999999966 7899999999999999999977898888899999999
Q ss_pred ccCccCCCC-CCccccCCccccEEecccCcccccCC
Q 009208 153 LNNNSLTGS-CPESLSKIESLTLVDLSYNNLSGSLP 187 (540)
Q Consensus 153 l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 187 (540)
+++|++++. .|..+..+++|+.|++++|++++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999953 34789999999999999999996654
No 298
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.60 E-value=1.9e-15 Score=142.58 Aligned_cols=114 Identities=25% Similarity=0.234 Sum_probs=104.8
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 47999999999998666677899999999999999999877778899999999999999999 89999999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
++|+|++..+..|..+++|+.|++++|++++..++
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 99999966667899999999999999999987764
No 299
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.60 E-value=2.8e-16 Score=172.92 Aligned_cols=110 Identities=28% Similarity=0.420 Sum_probs=67.9
Q ss_pred EEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccC
Q 009208 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (540)
Q Consensus 76 l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (540)
++.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 302 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD 302 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC
Confidence 445666666665 45555556666666666666666 55666666666666666666666 5566666666666666666
Q ss_pred ccCCCCCCccccCCccccEEecccCcccccCCCC
Q 009208 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI 189 (540)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (540)
|.|+ .+|..|.+|++|+.|+|++|+|++.+|..
T Consensus 303 N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~ 335 (727)
T 4b8c_D 303 NMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKI 335 (727)
T ss_dssp SCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHH
T ss_pred CCCC-ccChhhhcCCCccEEeCCCCccCCCChHH
Confidence 6665 55655666666666666666666655544
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.60 E-value=1.1e-15 Score=159.36 Aligned_cols=130 Identities=18% Similarity=0.136 Sum_probs=111.1
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 47999999999999988999999999999999999999888899999999999999999999666666999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCC-C-----cccccccCCCCCc
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI-S-----ARTFKVTGNPLIC 203 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~-----~~~~~~~~n~~~~ 203 (540)
++|+++...+..|.++++|+.|++++|+..+.+|.. . .+.+++++|.+..
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 999999666668889999999999986555555542 1 1556778887643
No 301
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.60 E-value=6.2e-16 Score=165.34 Aligned_cols=140 Identities=19% Similarity=0.259 Sum_probs=119.3
Q ss_pred CccceeeeecCC------------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEe
Q 009208 62 PCSWRMITCSPD------------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (540)
Q Consensus 62 ~c~w~gv~c~~~------------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 129 (540)
.|.|.|+ |+.. .+++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4888887 7521 37999999999999888899999999999999999999888899999999999999
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCC-CCCccccCCccccEEecccCcccccCCCC-Cc-----ccccccCCCCC
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTG-SCPESLSKIESLTLVDLSYNNLSGSLPKI-SA-----RTFKVTGNPLI 202 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~-----~~~~~~~n~~~ 202 (540)
++|++++..|..|+++++|++|+|++|++++ ..|..+.++++|+.|++++|++.+.+|.. .. +.+++.+|.+.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999997666679999999999999999986 35778999999999999999966666632 21 45677777764
No 302
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.60 E-value=1.7e-15 Score=146.91 Aligned_cols=126 Identities=25% Similarity=0.229 Sum_probs=111.5
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|+|++|.+++..+..++++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 188 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL 188 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEEC
Confidence 47999999999999877788999999999999999999887778899999999999999999777777899999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCcccccccCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISARTFKVTGNPL 201 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~~n~~ 201 (540)
++|++++..|..+..+++|+.|++++|++.+.+|.+ +.+.+.+|.+
T Consensus 189 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~l--~~l~~~~n~~ 234 (272)
T 3rfs_A 189 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGI--RYLSEWINKH 234 (272)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT--HHHHHHHHHT
T ss_pred CCCcCCccCHHHHhCCcCCCEEEccCCCccccCcHH--HHHHHHHHhC
Confidence 999999888888999999999999999999998865 3344444433
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.60 E-value=1.2e-15 Score=152.06 Aligned_cols=127 Identities=22% Similarity=0.340 Sum_probs=111.5
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCC---------CCcccEEEeeCCCCcccCCccccC
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGK---------LEKLQTLDLSNNKFTGEIPDSLGD 144 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~---------l~~L~~L~ls~N~l~~~~p~~~~~ 144 (540)
.+++.|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+.. +++|++|+|++|+|+ .+|..+++
T Consensus 127 ~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~ 204 (328)
T 4fcg_A 127 AGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN 204 (328)
T ss_dssp TTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG
T ss_pred CCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC
Confidence 47999999999999 88999999999999999999998899987765 999999999999999 89999999
Q ss_pred CCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 145 LGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 145 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
+++|++|+|++|+++ .+|..+..+++|+.|++++|++.+.+|.... +.+++.+|.+..
T Consensus 205 l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 205 LQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL 267 (328)
T ss_dssp CTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCC
T ss_pred CCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchh
Confidence 999999999999999 5777899999999999999999998887543 556788876543
No 304
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.60 E-value=1.4e-15 Score=147.77 Aligned_cols=114 Identities=21% Similarity=0.254 Sum_probs=77.9
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|++++..+..+..+++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 35777777777777655566777777777777777777666666777777777777777777544445677777777777
Q ss_pred cCccCCC-CCCccccCCccccEEecccCcccccCC
Q 009208 154 NNNSLTG-SCPESLSKIESLTLVDLSYNNLSGSLP 187 (540)
Q Consensus 154 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 187 (540)
++|++++ .+|..+..+++|+.|++++|++++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 7777764 246667777777777777777665433
No 305
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.60 E-value=6.7e-16 Score=167.20 Aligned_cols=132 Identities=19% Similarity=0.212 Sum_probs=99.1
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCC-CCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG-PIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 152 (540)
..++.|++++|.+++..|..++++++|++|+|++|.+++ .+|..|.++++|++|+|++|++++..|..+.++++|++|+
T Consensus 424 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 424 EKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 357777777777777777777777778888888887776 3677777888888888888888877777788888888888
Q ss_pred ccCccCCCCCCccccCCccccEEecccCcccccCCCCC------cccccccCCCCCcCCC
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS------ARTFKVTGNPLICGPK 206 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~------~~~~~~~~n~~~~~~~ 206 (540)
|++|++++..|..+..+++|+.|++++|+|+. +|... .+.+++.+|++.|+|+
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 88888887777778888888888888888873 44321 2456788888888765
No 306
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.60 E-value=8.8e-16 Score=172.58 Aligned_cols=131 Identities=24% Similarity=0.281 Sum_probs=99.2
Q ss_pred cEEEecCCCCCCccccCc-cccCCCccCEEEcccCCCC-----CCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCc
Q 009208 75 YVSALGLPSQSLSGTLSP-WIGNLTKLQSVLLQNNAIL-----GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNL 148 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 148 (540)
+++.|+|++|.+++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++..|..|..+++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 566677777777654332 3555677777777777776 3445567888888888888888887777778888888
Q ss_pred chhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc--ccccccCCCCCcCCCC
Q 009208 149 NYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLICGPKA 207 (540)
Q Consensus 149 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~~~~~~ 207 (540)
+.|+|++|+|++..|..+. ++|+.|++++|+|++.+|+... ..+++++||+.|+|..
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp SEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred heeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 8888888888865555554 7888899999999888887644 5678999999998763
No 307
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.60 E-value=1.4e-15 Score=158.09 Aligned_cols=138 Identities=20% Similarity=0.187 Sum_probs=113.7
Q ss_pred ceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCC
Q 009208 65 WRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKF 134 (540)
Q Consensus 65 w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 134 (540)
|..|.|... ..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 556777632 4689999999999988889999999999999999999988888999999999999999999
Q ss_pred cccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCC-C-----cccccccCCCCC
Q 009208 135 TGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI-S-----ARTFKVTGNPLI 202 (540)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~-----~~~~~~~~n~~~ 202 (540)
++..+..|..+++|++|+|++|+++...+..|.++++|+.|++++|+..+.+|.. . .+.+++++|.+.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~ 198 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR 198 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc
Confidence 9555557999999999999999999666668888999999999986555555542 1 145677777664
No 308
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.59 E-value=6.9e-16 Score=152.25 Aligned_cols=142 Identities=22% Similarity=0.239 Sum_probs=118.0
Q ss_pred CCCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCC--CCCcccCCCCcccEE
Q 009208 60 VDPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG--PIPASLGKLEKLQTL 127 (540)
Q Consensus 60 ~~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L 127 (540)
...|.|.+|.|+.. ..++.|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 34589999999853 379999999999995444568999999999999999983 236777889999999
Q ss_pred EeeCCCCcccCCccccCCCCcchhhccCccCCCCCC-ccccCCccccEEecccCcccccCCCCCc-----ccccccCCCC
Q 009208 128 DLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCP-ESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPL 201 (540)
Q Consensus 128 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~ 201 (540)
+|++|+++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|++++.+|.... +.+++++|.+
T Consensus 84 ~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 162 (306)
T 2z66_A 84 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 162 (306)
T ss_dssp ECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEE
T ss_pred ECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcc
Confidence 99999999 788889999999999999999985544 5788999999999999999987776432 5567888876
Q ss_pred C
Q 009208 202 I 202 (540)
Q Consensus 202 ~ 202 (540)
.
T Consensus 163 ~ 163 (306)
T 2z66_A 163 Q 163 (306)
T ss_dssp G
T ss_pred c
Confidence 3
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.58 E-value=2.6e-15 Score=156.10 Aligned_cols=130 Identities=24% Similarity=0.285 Sum_probs=97.1
Q ss_pred cEEEecCCCCCCccccCc-------------------------cccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEe
Q 009208 75 YVSALGLPSQSLSGTLSP-------------------------WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDL 129 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~-------------------------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 129 (540)
+++.|+|++|.|++..+. .|.++++|++|+|++|+++ .+| .+..+++|++|+|
T Consensus 137 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~L 214 (440)
T 3zyj_A 137 KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDL 214 (440)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEEC
T ss_pred cCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEEC
Confidence 677778877777654433 3555666666666666666 444 3667777888888
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcC
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICG 204 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~ 204 (540)
++|+|++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+.... +.+++.+|||.|+
T Consensus 215 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 215 SGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 88888877777888888888888888888877778888888899999999988876665432 5678899999988
Q ss_pred CC
Q 009208 205 PK 206 (540)
Q Consensus 205 ~~ 206 (540)
|.
T Consensus 295 C~ 296 (440)
T 3zyj_A 295 CD 296 (440)
T ss_dssp ST
T ss_pred CC
Confidence 75
No 310
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.58 E-value=2.3e-15 Score=158.14 Aligned_cols=140 Identities=16% Similarity=0.181 Sum_probs=119.4
Q ss_pred cceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCC
Q 009208 64 SWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK 133 (540)
Q Consensus 64 ~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 133 (540)
.|..|.|... ..++.|+|++|.|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3677888632 378999999999998888999999999999999999998889999999999999999999
Q ss_pred CcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 134 FTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 134 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
+++..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|++++..|.... +.+++.+|.+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 166 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 166 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc
Confidence 9954445689999999999999999988888999999999999999999877665432 556777876643
No 311
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.58 E-value=3.8e-15 Score=145.72 Aligned_cols=126 Identities=24% Similarity=0.203 Sum_probs=90.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|+|++|.|++..+..|.++++|++|+|++|.|++. |. ...+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 3678888888888877777888888888888888887743 32 266777777777777777 67777777777777777
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
++|+|++..|..|..+++|+.|+|++|+|++.+|..+. +.+++++|.+.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 161 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT 161 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC
Confidence 77777755556677777777777777777765554322 44566677654
No 312
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.58 E-value=2.6e-15 Score=162.53 Aligned_cols=139 Identities=17% Similarity=0.140 Sum_probs=121.7
Q ss_pred ceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCC
Q 009208 65 WRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKF 134 (540)
Q Consensus 65 w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 134 (540)
+..+.|... ..++.|+|++|.|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 455778631 4799999999999988899999999999999999999988899999999999999999999
Q ss_pred cccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccc-cCCCCCc----ccccccCCCCCc
Q 009208 135 TGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA----RTFKVTGNPLIC 203 (540)
Q Consensus 135 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~----~~~~~~~n~~~~ 203 (540)
++..|..|+++++|++|+|++|++++..|..+.++++|++|++++|++++ .+|.... +.+++++|.+..
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY 167 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc
Confidence 98889999999999999999999997667889999999999999999997 4455432 567788887643
No 313
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.58 E-value=1.5e-15 Score=164.15 Aligned_cols=152 Identities=13% Similarity=0.117 Sum_probs=94.1
Q ss_pred CccCCCCCCCCCCcc----ceeeeecC------C-----------CcEEEecCCCCCCccccCccccCCCccCEEEcccC
Q 009208 50 NVLENWDITSVDPCS----WRMITCSP------D-----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNN 108 (540)
Q Consensus 50 ~~~~~w~~~~~~~c~----w~gv~c~~------~-----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N 108 (540)
..+++|. ++.+||. |.++.|+. . ..++.|++++|.++...+..+.++++|++|+|++|
T Consensus 7 ~~l~~~~-~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n 85 (597)
T 3oja_B 7 YNVKPRQ-PEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL 85 (597)
T ss_dssp ----CCC-SEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTS
T ss_pred ccccCCC-CCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCC
Confidence 3467886 3456663 66655541 0 24566666777666444445666777777777777
Q ss_pred CCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCC
Q 009208 109 AILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 109 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
.+++..|..|.++++|++|+|++|.|++..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|++++.+|.
T Consensus 86 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 165 (597)
T 3oja_B 86 QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD 165 (597)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred CCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh
Confidence 77766666777777777777777777765556667777777777777777744444456777777777777777766654
Q ss_pred CCc-----ccccccCCCCC
Q 009208 189 ISA-----RTFKVTGNPLI 202 (540)
Q Consensus 189 ~~~-----~~~~~~~n~~~ 202 (540)
... +.+++++|.+.
T Consensus 166 ~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 166 TFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp TTTTCTTCCEEECTTSCCS
T ss_pred hhhcCCcCcEEECcCCCCC
Confidence 322 44566666553
No 314
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.57 E-value=9.5e-15 Score=145.84 Aligned_cols=139 Identities=24% Similarity=0.320 Sum_probs=119.2
Q ss_pred CccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeC
Q 009208 62 PCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (540)
Q Consensus 62 ~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 131 (540)
.|.|+.+.|+.. ..++.|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 378999999742 3799999999999987788999999999999999999988899999999999999999
Q ss_pred CCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccc--cCCCCC----cccccccCCCCCc
Q 009208 132 NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG--SLPKIS----ARTFKVTGNPLIC 203 (540)
Q Consensus 132 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~----~~~~~~~~n~~~~ 203 (540)
|+++ .+|..+. ++|++|++++|++++..+..|..+++|+.|++++|+++. ..|... .+.+++++|.+..
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc
Confidence 9999 8888766 899999999999996666679999999999999999963 444432 2556777776643
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.56 E-value=4.9e-15 Score=154.51 Aligned_cols=131 Identities=24% Similarity=0.275 Sum_probs=102.2
Q ss_pred CcEEEecCCCCCCccccCcc-------------------------ccCCCccCEEEcccCCCCCCCCcccCCCCcccEEE
Q 009208 74 GYVSALGLPSQSLSGTLSPW-------------------------IGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLD 128 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~-------------------------~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 128 (540)
.+++.|+|++|.|++..+.. |.++++|++|+|++|++++ +| .+..+++|++|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELE 224 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEE
Confidence 36888888888887544333 5556667777777777773 34 477778888888
Q ss_pred eeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 129 LSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 129 ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++.++.... +.+++.+|||.|
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 888888877788888999999999999999877788889999999999999999876665432 567899999999
Q ss_pred CCC
Q 009208 204 GPK 206 (540)
Q Consensus 204 ~~~ 206 (540)
+|.
T Consensus 305 dC~ 307 (452)
T 3zyi_A 305 DCD 307 (452)
T ss_dssp STT
T ss_pred CCC
Confidence 875
No 316
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.56 E-value=5.5e-15 Score=140.29 Aligned_cols=127 Identities=21% Similarity=0.270 Sum_probs=109.3
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCC-CCCCCCcccCCCCcccEEEeeC-CCCcccCCccccCCCCcchh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNA-ILGPIPASLGKLEKLQTLDLSN-NKFTGEIPDSLGDLGNLNYL 151 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L 151 (540)
..++.|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 479999999999997777799999999999999997 8866667899999999999999 99996666789999999999
Q ss_pred hccCccCCCCCCccccCCcccc---EEecccC-cccccCCCCCc-----c-cccccCCCCC
Q 009208 152 RLNNNSLTGSCPESLSKIESLT---LVDLSYN-NLSGSLPKISA-----R-TFKVTGNPLI 202 (540)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~~~~-----~-~~~~~~n~~~ 202 (540)
++++|++++ +|. +..+++|+ .|++++| ++++..+.... + .+++++|.+.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 999999994 776 88888888 9999999 99866655332 4 6777788764
No 317
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.56 E-value=2.7e-15 Score=162.38 Aligned_cols=131 Identities=28% Similarity=0.348 Sum_probs=74.0
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCC---CCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchh
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG---PIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYL 151 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~---~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 151 (540)
+++.|+|++|.+++..|..++++++|++|+|++|.+++ ..+..+..+++|++|+|++|++++..|..|..+++|++|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 45555555555555455555555555555555555554 122345555555555555555555555556666666666
Q ss_pred hccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 152 RLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
+|++|++++..|..+..+++| .|++++|++++.+|.... +.+++.+|++.|.|.
T Consensus 506 ~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 666666665555666666666 666666666655554321 456677777766543
No 318
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.55 E-value=3.4e-15 Score=152.53 Aligned_cols=129 Identities=15% Similarity=0.146 Sum_probs=98.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|++++|.++...+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 35777888888887544445788888888888888888777778888888888888888888766777888888888888
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
++|+++...+..|.++++|++|++++|++++..|.... +.+++++|.+.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 88888843334467888888888888888876665332 45677777664
No 319
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.55 E-value=4.5e-15 Score=159.35 Aligned_cols=132 Identities=20% Similarity=0.302 Sum_probs=83.6
Q ss_pred cEEEecCCCCCCccccC-ccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCc-ccCCccccCCCCcchhh
Q 009208 75 YVSALGLPSQSLSGTLS-PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFT-GEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~ 152 (540)
+++.|++++|.+++..| ..+.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ +.+|..+..+++|++|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 34455555555554433 34566666666666666666666666666667777777777665 45666666777777777
Q ss_pred ccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
|++|++++..|..|..+++|+.|++++|++++.+|.... +.+++.+|++.|.++
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 777777666666677777777777777777766554322 445667777766554
No 320
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.54 E-value=1.9e-15 Score=164.30 Aligned_cols=128 Identities=22% Similarity=0.389 Sum_probs=117.8
Q ss_pred CcEEEecCCCCCCccc-----------------cCcccc--CCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCC-
Q 009208 74 GYVSALGLPSQSLSGT-----------------LSPWIG--NLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK- 133 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~-----------------~~~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~- 133 (540)
.+++.|+|++|.++|. +|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 4799999999999986 999999 99999999999999999999999999999999999999
Q ss_pred Ccc-cCCccccCC------CCcchhhccCccCCCCCCc--cccCCccccEEecccCcccccCCCCCc----ccccccCCC
Q 009208 134 FTG-EIPDSLGDL------GNLNYLRLNNNSLTGSCPE--SLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNP 200 (540)
Q Consensus 134 l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~ 200 (540)
++| .+|..++++ ++|++|+|++|+++ .+|. .+.++++|+.|++++|+++|.+|.+.. +.+++++|.
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQ 364 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSE
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCc
Confidence 998 899999887 99999999999999 8998 899999999999999999999994422 567888887
Q ss_pred CC
Q 009208 201 LI 202 (540)
Q Consensus 201 ~~ 202 (540)
+.
T Consensus 365 l~ 366 (636)
T 4eco_A 365 IT 366 (636)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 321
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.54 E-value=1.3e-14 Score=159.40 Aligned_cols=129 Identities=22% Similarity=0.228 Sum_probs=105.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47889999999999777778999999999999999999888888888999999999999998433346888999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
++|++++..|..|.++++|++|++++|++++.+|.... +.+++.+|.+.
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc
Confidence 99998866667888889999999999988887765432 45667777653
No 322
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.53 E-value=9.1e-15 Score=156.11 Aligned_cols=110 Identities=26% Similarity=0.321 Sum_probs=102.1
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|+|++|.|++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 58889999999996 676 999999999999999999 889999999999999999999995 78 89999999999999
Q ss_pred CccCCCCC-CccccCCccccEEecccCcccccCCCC
Q 009208 155 NNSLTGSC-PESLSKIESLTLVDLSYNNLSGSLPKI 189 (540)
Q Consensus 155 ~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (540)
+|+|++.. |..+..+++|+.|+|++|+|++.+|..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999776 999999999999999999999877654
No 323
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.53 E-value=1e-14 Score=163.92 Aligned_cols=139 Identities=21% Similarity=0.209 Sum_probs=109.3
Q ss_pred ccceeeeecCCCcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCC-CcccCCCCcccEEEeeCCCCcccCCcc
Q 009208 63 CSWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPI-PASLGKLEKLQTLDLSNNKFTGEIPDS 141 (540)
Q Consensus 63 c~w~gv~c~~~~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~~ 141 (540)
|.|..|.+ -..+++.|+|++|.|++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|+|++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666766 3468899999999999888888888999999999888666555 778888888888888888888777888
Q ss_pred ccCCCCcchhhccCccCCCCCCcc--ccCCccccEEecccCcccccCCC-CC-----cccccccCCCCC
Q 009208 142 LGDLGNLNYLRLNNNSLTGSCPES--LSKIESLTLVDLSYNNLSGSLPK-IS-----ARTFKVTGNPLI 202 (540)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~-~~-----~~~~~~~~n~~~ 202 (540)
|.++++|++|+|++|.+++.+|.. |.++++|++|+|++|++++..|. .. .+.+++++|.+.
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 888888888888888888766655 88888888888888888876542 11 145667777653
No 324
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.53 E-value=2.2e-14 Score=143.11 Aligned_cols=139 Identities=23% Similarity=0.352 Sum_probs=117.7
Q ss_pred CCccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEee
Q 009208 61 DPCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLS 130 (540)
Q Consensus 61 ~~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls 130 (540)
..|.|+.+.|+.. ..++.|+|++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4478999999742 368999999999998777799999999999999999998889999999999999999
Q ss_pred CCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccc--cCCCCCc-----ccccccCCCCC
Q 009208 131 NNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG--SLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 131 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~-----~~~~~~~n~~~ 202 (540)
+|+++ .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|+++. ..|.... +.+++++|.+.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 99999 7888765 799999999999997777789999999999999999963 4443221 45667777653
No 325
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.52 E-value=9e-15 Score=134.51 Aligned_cols=103 Identities=17% Similarity=0.284 Sum_probs=51.3
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
+++.|++++|.++ .+| .+..+++|++|++++|.++ . +..+..+++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 3445555555554 333 3455555555555555443 1 2244555555555555555554444455555555555555
Q ss_pred CccCCCCCCccccCCccccEEecccCc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNN 181 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~ 181 (540)
+|++++..|..+..+++|+.|++++|+
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 555554444445555555555555554
No 326
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2.9e-14 Score=127.76 Aligned_cols=105 Identities=24% Similarity=0.260 Sum_probs=92.0
Q ss_pred ccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecc
Q 009208 99 KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLS 178 (540)
Q Consensus 99 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (540)
+.+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3578999999999 6787664 899999999999998778899999999999999999997777778999999999999
Q ss_pred cCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 179 YNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 179 ~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
+|+|++..|.... +.+++++|++.|.+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999987775432 567899999999864
No 327
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.51 E-value=2.6e-14 Score=143.60 Aligned_cols=132 Identities=20% Similarity=0.199 Sum_probs=105.3
Q ss_pred CccceeeeecCCCcEEEecCCCC-CCccccCccccCCCccCEEEccc-CCCCCCCCcccCCCCcccEEEeeCCCCcccCC
Q 009208 62 PCSWRMITCSPDGYVSALGLPSQ-SLSGTLSPWIGNLTKLQSVLLQN-NAILGPIPASLGKLEKLQTLDLSNNKFTGEIP 139 (540)
Q Consensus 62 ~c~w~gv~c~~~~~l~~l~l~~~-~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 139 (540)
.|.|..|.|+ ++ +|+ .+|. |..+++|+.|+|++ |+|++..|..|.+|++|++|+|++|+|++..|
T Consensus 7 ~C~~~~v~~~-----------~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 73 (347)
T 2ifg_A 7 PHGSSGLRCT-----------RDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP 73 (347)
T ss_dssp CSSSSCEECC-----------SSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT
T ss_pred cccCCEEEcC-----------CCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCH
Confidence 3888888775 34 677 4788 99999999999996 99998877899999999999999999998888
Q ss_pred ccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCC------cccccccCCCCCcCCCC
Q 009208 140 DSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS------ARTFKVTGNPLICGPKA 207 (540)
Q Consensus 140 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~------~~~~~~~~n~~~~~~~~ 207 (540)
..|.+|++|+.|+|++|+|++..+..|..++ |+.|+|++|+|.....-.. .....+..+.+.|..+.
T Consensus 74 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 74 DAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp TGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred HHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 8999999999999999999965555566665 9999999999985432100 02233455667776543
No 328
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.51 E-value=1.1e-14 Score=134.03 Aligned_cols=123 Identities=15% Similarity=0.242 Sum_probs=105.9
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|++++|.++ .++.+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999775 3458999999999999999999878899999999999999999999888999999999999999
Q ss_pred cCcc-CCCCCCccccCCccccEEecccCcccccCCCCC----cccccccCCCC
Q 009208 154 NNNS-LTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS----ARTFKVTGNPL 201 (540)
Q Consensus 154 ~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~~~~~~~n~~ 201 (540)
++|+ ++ .+| .+..+++|+.|++++|++++ ++.+. .+.+++.+|++
T Consensus 144 ~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 144 SYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YRGIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CTTGGGCSSCCEEEECBC--
T ss_pred cCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hHHhccCCCCCEEEeeCccc
Confidence 9998 66 676 69999999999999999996 33322 15677888875
No 329
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.51 E-value=1.1e-14 Score=144.54 Aligned_cols=105 Identities=20% Similarity=0.158 Sum_probs=48.9
Q ss_pred EEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccC-CCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLG-KLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 76 l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
++.|+|++|.+++..+..++++++|++|+|++|.+++..|..+. .+++|++|+|++|+|++ +|. ...+++|++|+|+
T Consensus 122 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls 199 (317)
T 3o53_A 122 KKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLS 199 (317)
T ss_dssp CEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECC
T ss_pred CCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECC
Confidence 44444444444444444444445555555555555444333332 34455555555555542 222 1234455555555
Q ss_pred CccCCCCCCccccCCccccEEecccCccc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
+|+++ .+|..+..+++|+.|++++|+|+
T Consensus 200 ~N~l~-~l~~~~~~l~~L~~L~L~~N~l~ 227 (317)
T 3o53_A 200 SNKLA-FMGPEFQSAAGVTWISLRNNKLV 227 (317)
T ss_dssp SSCCC-EECGGGGGGTTCSEEECTTSCCC
T ss_pred CCcCC-cchhhhcccCcccEEECcCCccc
Confidence 55555 23333445555555555555555
No 330
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.50 E-value=3e-14 Score=156.33 Aligned_cols=132 Identities=24% Similarity=0.288 Sum_probs=96.9
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCC--------CcccCCCCcccEEEeeCCCCcccCCc-cccCC
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPI--------PASLGKLEKLQTLDLSNNKFTGEIPD-SLGDL 145 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~--------p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l 145 (540)
.++.|+|++|+|++..+..|.++++|++|+|++|++++.. +..|.++++|++|+|++|+|+ .+|. .|.++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l 559 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDL 559 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccc
Confidence 5777777777777666666777777777777777776431 123677777888888888887 5554 57888
Q ss_pred CCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCC------cccccccCCCCCcCCCC
Q 009208 146 GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS------ARTFKVTGNPLICGPKA 207 (540)
Q Consensus 146 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~------~~~~~~~~n~~~~~~~~ 207 (540)
++|+.|+|++|++++..+..|..+++|+.|++++|+|++.+|... .+.+++.+|||.|+|..
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 888888888888886555667788888888888888887666422 25678999999998763
No 331
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.50 E-value=2e-14 Score=145.21 Aligned_cols=132 Identities=24% Similarity=0.245 Sum_probs=114.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 47999999999999888889999999999999999999877778999999999999999999877889999999999999
Q ss_pred cCccCCCCCCcc-c---cCCccccEEecccCcccccCCCCC-------cccccccCCCCCcCCC
Q 009208 154 NNNSLTGSCPES-L---SKIESLTLVDLSYNNLSGSLPKIS-------ARTFKVTGNPLICGPK 206 (540)
Q Consensus 154 ~~N~l~~~~p~~-~---~~l~~L~~L~l~~N~l~~~~p~~~-------~~~~~~~~n~~~~~~~ 206 (540)
++|+|++ +|.. | ..+++|+.|+|++|+|++..+... .+.+.+.+|+|.|+|.
T Consensus 144 ~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 144 SQNQISR-FPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CSSCCCS-CCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred CCCcCCe-eCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 9999994 5554 4 579999999999999995443211 2568899999999864
No 332
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.50 E-value=1.8e-14 Score=153.01 Aligned_cols=108 Identities=24% Similarity=0.299 Sum_probs=66.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCC--CCCcccCCCCcccEEEeeCCCCcccCCcc-ccCCCCcch
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILG--PIPASLGKLEKLQTLDLSNNKFTGEIPDS-LGDLGNLNY 150 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~ 150 (540)
..++.|+|++|.+++.+|..++++++|++|+|++|++++ .+|..+.++++|++|+|++|++++.+|.. +..+++|++
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 467777777777777777777777777777777777775 44556777777777777777777545553 555555555
Q ss_pred hhccCccCCCCCCccccCCccccEEecccCccc
Q 009208 151 LRLNNNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 151 L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
|+|++|++++.+|..+. ++|+.|++++|+|+
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 55555555444333332 34444444444444
No 333
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=4e-14 Score=152.91 Aligned_cols=128 Identities=20% Similarity=0.146 Sum_probs=110.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 47999999999999888889999999999999999999988888999999999999999999444445799999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc--ccccccCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPL 201 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~ 201 (540)
++|.+++..|..|..+++|+.|++++|++++..+.... ..+++.+|.+
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcc
Confidence 99999988888999999999999999999965332221 4456666654
No 334
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.50 E-value=1.5e-14 Score=129.43 Aligned_cols=111 Identities=27% Similarity=0.297 Sum_probs=99.1
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCC--ccccCCCCcchh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIP--DSLGDLGNLNYL 151 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p--~~~~~l~~L~~L 151 (540)
.+++.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|+|++|+|+ .+| ..+..+++|+.|
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-DISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC-SSGGGGGGSSCSCCCEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC-cchhHHHHhcCCCCCEE
Confidence 4799999999999965 88999999999999999999878988888999999999999999 454 789999999999
Q ss_pred hccCccCCCCCC---ccccCCccccEEecccCcccccCCC
Q 009208 152 RLNNNSLTGSCP---ESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 152 ~l~~N~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
++++|++++..+ ..+..+++|+.|++++|.+. .+|+
T Consensus 126 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 126 DLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp ECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred EeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 999999995444 38999999999999999998 4443
No 335
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.50 E-value=2.6e-14 Score=153.27 Aligned_cols=132 Identities=20% Similarity=0.290 Sum_probs=76.8
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCC--CCcccCCCCcccEEEeeCCCCcccCCcc-ccCC-----
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGP--IPASLGKLEKLQTLDLSNNKFTGEIPDS-LGDL----- 145 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l----- 145 (540)
.+++.|+|++|.+++.+|..++++++|++|+|++|++++. +|..|.++++|++|+|++|++++.+|.. +..+
T Consensus 353 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred CCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 3566666666666666666666666666666666666642 2344566666666666666666434433 3333
Q ss_pred -----------------CCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 146 -----------------GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 146 -----------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++.++.... +.+++++|++.|
T Consensus 433 L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp EECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred EECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCC
Confidence 45566666666665 5565555666777777777777633222111 345667777766
Q ss_pred CCC
Q 009208 204 GPK 206 (540)
Q Consensus 204 ~~~ 206 (540)
.|+
T Consensus 512 ~c~ 514 (562)
T 3a79_B 512 TCP 514 (562)
T ss_dssp CHH
T ss_pred Ccc
Confidence 543
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.50 E-value=1.5e-14 Score=151.78 Aligned_cols=131 Identities=20% Similarity=0.208 Sum_probs=95.2
Q ss_pred EEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccC
Q 009208 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (540)
Q Consensus 76 l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (540)
++.|+|++|.+.+.+|+.+....+|+.|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 33344444333333443333344566666666777744335678888899999999998877777788899999999999
Q ss_pred ccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 156 NSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
|++++..|..|..+++|+.|+|++|+|++..+..+. +.+++.+|++.|+|.
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 999888888899999999999999999876554432 567899999998765
No 337
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.49 E-value=3.6e-14 Score=152.30 Aligned_cols=129 Identities=18% Similarity=0.154 Sum_probs=96.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 36788888888888777778888888888888888888776777888888888888888888666677888888888888
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccc-cCCCCCc-----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSG-SLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~-----~~~~~~~n~~~ 202 (540)
++|++++..+..++++++|++|++++|.+++ .+|.... +.+++++|.+.
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 8888875444467788888888888888776 3454322 45667777654
No 338
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=7.7e-14 Score=125.49 Aligned_cols=103 Identities=29% Similarity=0.307 Sum_probs=89.8
Q ss_pred CEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccC
Q 009208 101 QSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYN 180 (540)
Q Consensus 101 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N 180 (540)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999998 7888775 89999999999999888889999999999999999999665566799999999999999
Q ss_pred cccccCCCCCc-----ccccccCCCCCcCCC
Q 009208 181 NLSGSLPKISA-----RTFKVTGNPLICGPK 206 (540)
Q Consensus 181 ~l~~~~p~~~~-----~~~~~~~n~~~~~~~ 206 (540)
+|++.++.... +.+++.+|++.|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99977665332 567899999988764
No 339
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.3e-14 Score=161.32 Aligned_cols=127 Identities=21% Similarity=0.301 Sum_probs=114.3
Q ss_pred CcEEEecCCCCCCcc-----------------ccCcccc--CCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCC-
Q 009208 74 GYVSALGLPSQSLSG-----------------TLSPWIG--NLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK- 133 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~-----------------~~~~~~~--~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~- 133 (540)
.+++.|+|++|.|+| .+|+.++ ++++|++|+|++|++.+.+|..|.++++|++|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 579999999999998 4999988 99999999999999999999999999999999999998
Q ss_pred Ccc-cCCccccCCC-------CcchhhccCccCCCCCCc--cccCCccccEEecccCcccccCCCCCc----ccccccCC
Q 009208 134 FTG-EIPDSLGDLG-------NLNYLRLNNNSLTGSCPE--SLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGN 199 (540)
Q Consensus 134 l~~-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n 199 (540)
|+| .+|..+++++ +|+.|+|++|+++ .+|. .+.++++|+.|+|++|+++ .+|.+.. +.+++++|
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N 605 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYN 605 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcCC
Confidence 998 8998777665 9999999999999 8998 8999999999999999999 8885432 56788888
Q ss_pred CCC
Q 009208 200 PLI 202 (540)
Q Consensus 200 ~~~ 202 (540)
.+.
T Consensus 606 ~l~ 608 (876)
T 4ecn_A 606 QIE 608 (876)
T ss_dssp CCS
T ss_pred ccc
Confidence 875
No 340
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.48 E-value=7.8e-14 Score=142.42 Aligned_cols=127 Identities=21% Similarity=0.194 Sum_probs=110.0
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCcc-ccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDS-LGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~ 152 (540)
.+++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. |.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 47999999999999877789999999999999999999888888999999999999999999 66665 68999999999
Q ss_pred ccCccCCCCCCccccCCccccEEecccCcccccCCCCCc--ccccccCCCC
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPL 201 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~ 201 (540)
+++|++++..|..+..+++|+.|++++|++++....... +.+++++|.+
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccc
Confidence 999999977788899999999999999999864222111 4456666654
No 341
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.48 E-value=9.2e-14 Score=138.53 Aligned_cols=125 Identities=26% Similarity=0.281 Sum_probs=77.1
Q ss_pred CcEEEecCCCCCCcc--ccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchh
Q 009208 74 GYVSALGLPSQSLSG--TLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYL 151 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 151 (540)
..++.|+|++|.++. ..+..+.++++|++|++++|.++ .+|..+. ++|++|+|++|++++..|..+..+++|+.|
T Consensus 145 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 145 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred ccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 367777777777753 55666777777777777777766 3454443 566666666666665555666666666666
Q ss_pred hccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCC
Q 009208 152 RLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLI 202 (540)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~ 202 (540)
+|++|++++..+..+..+++|+.|++++|+++ .+|.... +.+++++|++.
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~ 276 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNIS 276 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCC
Confidence 66666666555555666666666666666666 3333211 34556666553
No 342
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.47 E-value=3.5e-14 Score=142.96 Aligned_cols=127 Identities=18% Similarity=0.199 Sum_probs=109.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCc--cccCCCCcchh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD--SLGDLGNLNYL 151 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L 151 (540)
.+++.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++ .+|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 47999999999999888889999999999999999999655555999999999999999999 6766 78999999999
Q ss_pred hccCc-cCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCC
Q 009208 152 RLNNN-SLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPL 201 (540)
Q Consensus 152 ~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~ 201 (540)
++++| .+++..|..|..+++|+.|++++|++++..|.... +.+++.+|.+
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999 47766678899999999999999999988776543 3456666654
No 343
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.47 E-value=7e-15 Score=145.50 Aligned_cols=108 Identities=23% Similarity=0.312 Sum_probs=64.9
Q ss_pred EEEecCCCCCC-ccccCcccc-------CCCccCEEEcccCCCCCCCCccc--CCCCcccEEEeeCCCCcccCCccccCC
Q 009208 76 VSALGLPSQSL-SGTLSPWIG-------NLTKLQSVLLQNNAILGPIPASL--GKLEKLQTLDLSNNKFTGEIPDSLGDL 145 (540)
Q Consensus 76 l~~l~l~~~~l-~~~~~~~~~-------~l~~L~~L~l~~N~l~~~~p~~~--~~l~~L~~L~ls~N~l~~~~p~~~~~l 145 (540)
++.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|++++. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 55566666666 334454444 56666666666666666666554 5666666666666666644 5555555
Q ss_pred -----CCcchhhccCccCCCCCCccccCCccccEEecccCcccc
Q 009208 146 -----GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 146 -----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
++|++|+|++|++++..|..|..+++|+.|++++|++.+
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 666666666666665555666666666666666666554
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.46 E-value=4.4e-14 Score=151.52 Aligned_cols=125 Identities=21% Similarity=0.189 Sum_probs=108.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++..|..|.++++|++|+|++|++++..|+.|.++++|++|+|++|+|+ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999999 78887 8999999999
Q ss_pred cCccCCC-CCCccccCCccccEEecccCcccccC----CCCCcccccccCCCC
Q 009208 154 NNNSLTG-SCPESLSKIESLTLVDLSYNNLSGSL----PKISARTFKVTGNPL 201 (540)
Q Consensus 154 ~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~----p~~~~~~~~~~~n~~ 201 (540)
++|++++ .+|..|.++++|++|++++|++++.. +.+..+.+++++|.+
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSC
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccc
Confidence 9999986 35689999999999999999998521 111115567777766
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.46 E-value=4e-14 Score=150.53 Aligned_cols=134 Identities=25% Similarity=0.431 Sum_probs=95.5
Q ss_pred cCCCCCCCCCCc-----cceee-eecCCCcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCccc
Q 009208 52 LENWDITSVDPC-----SWRMI-TCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQ 125 (540)
Q Consensus 52 ~~~w~~~~~~~c-----~w~gv-~c~~~~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 125 (540)
+.+|.. +.+|| .|.|+ .|.. ++++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~-~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLI-NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHH-TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhc-cCCccccccchhhhcccccc-CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCC
Confidence 556753 56778 79999 7863 478999999999986 777663 78888888888888 667 4467888
Q ss_pred EEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc--ccccccCCCCCc
Q 009208 126 TLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNPLIC 203 (540)
Q Consensus 126 ~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~~~~ 203 (540)
+|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.... +.+++++|.+..
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC
Confidence 88888888884 777 554 77788888887774 665 56777777777777775 444221 445666666533
No 346
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.46 E-value=8.5e-14 Score=138.92 Aligned_cols=106 Identities=26% Similarity=0.309 Sum_probs=56.1
Q ss_pred CcEEEecCCCCCCc--cccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchh
Q 009208 74 GYVSALGLPSQSLS--GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYL 151 (540)
Q Consensus 74 ~~l~~l~l~~~~l~--~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 151 (540)
.+++.|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|+|++|++++..|..+..+++|+.|
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred ccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 36777777777775 3555666655 55555555555552 343332 445555555555554444445555555555
Q ss_pred hccCccCCCCCCccccCCccccEEecccCccc
Q 009208 152 RLNNNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 152 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
+|++|++++..|..+..+++|+.|++++|+++
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 55555555444444455555555555555554
No 347
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.45 E-value=3.2e-14 Score=140.72 Aligned_cols=128 Identities=22% Similarity=0.234 Sum_probs=93.9
Q ss_pred CcEEEecCCCCCCccccCccccCC-----CccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCccc--CCccc--cC
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNL-----TKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE--IPDSL--GD 144 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~~--~~ 144 (540)
.+++.|+|++|.+++. |..++++ ++|++|+|++|++++..|..|.++++|++|+|++|++.+. +|..+ ..
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4688888888888876 7777776 8888888888888877778888888888888888887755 34444 77
Q ss_pred CCCcchhhccCccCCC--CCC-ccccCCccccEEecccCcccccCCC--CC----cccccccCCCCC
Q 009208 145 LGNLNYLRLNNNSLTG--SCP-ESLSKIESLTLVDLSYNNLSGSLPK--IS----ARTFKVTGNPLI 202 (540)
Q Consensus 145 l~~L~~L~l~~N~l~~--~~p-~~~~~l~~L~~L~l~~N~l~~~~p~--~~----~~~~~~~~n~~~ 202 (540)
+++|++|+|++|++++ .++ ..+..+++|+.|++++|++++.+|. .. .+.+++++|.+.
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 8888888888888873 122 2345677888888888888876642 11 155677777765
No 348
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.45 E-value=4.2e-14 Score=139.73 Aligned_cols=110 Identities=20% Similarity=0.102 Sum_probs=49.4
Q ss_pred cEEEecCCCCCCccccC----ccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCccc--CC--ccccCCC
Q 009208 75 YVSALGLPSQSLSGTLS----PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE--IP--DSLGDLG 146 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p--~~~~~l~ 146 (540)
+++.|+|++|.+++..+ ..+..+++|++|+|++|++++..|..|.++++|++|+|++|++.+. ++ ..+..++
T Consensus 118 ~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~ 197 (310)
T 4glp_A 118 ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFP 197 (310)
T ss_dssp CCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSC
T ss_pred CCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCC
Confidence 34555555555554322 2233445555555555555544444555555555555555554321 11 1123444
Q ss_pred CcchhhccCccCCCCCCc----cccCCccccEEecccCccccc
Q 009208 147 NLNYLRLNNNSLTGSCPE----SLSKIESLTLVDLSYNNLSGS 185 (540)
Q Consensus 147 ~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~ 185 (540)
+|++|+|++|+++ .+|. .+..+++|++|+|++|+|++.
T Consensus 198 ~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 239 (310)
T 4glp_A 198 AIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRAT 239 (310)
T ss_dssp CCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCC
T ss_pred CCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCcc
Confidence 4445555554444 2222 123444444444444444444
No 349
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.45 E-value=6.9e-14 Score=132.66 Aligned_cols=126 Identities=20% Similarity=0.206 Sum_probs=107.3
Q ss_pred CcEEEecCCCCC-CccccCccccCCCccCEEEccc-CCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcc--
Q 009208 74 GYVSALGLPSQS-LSGTLSPWIGNLTKLQSVLLQN-NAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLN-- 149 (540)
Q Consensus 74 ~~l~~l~l~~~~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~-- 149 (540)
.+++.|+|++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+|++|+++ .+|. +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc-cccccccccc
Confidence 479999999997 8866667899999999999998 9999777788999999999999999999 4887 88888888
Q ss_pred -hhhccCc-cCCCCCCccccCCcccc-EEecccCcccccCCCC-Cc----ccccccCCC-CC
Q 009208 150 -YLRLNNN-SLTGSCPESLSKIESLT-LVDLSYNNLSGSLPKI-SA----RTFKVTGNP-LI 202 (540)
Q Consensus 150 -~L~l~~N-~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~-~~----~~~~~~~n~-~~ 202 (540)
+|++++| ++++..+..|..+++|+ .|++++|+++ .+|.. +. +.+++.+|+ +.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~ 193 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLT 193 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCC
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcc
Confidence 9999999 99966666799999999 9999999999 55543 21 456788885 53
No 350
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.44 E-value=9.1e-14 Score=125.29 Aligned_cols=109 Identities=22% Similarity=0.231 Sum_probs=91.3
Q ss_pred CcEEEecCCCCCCccccCccccCCC-ccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLT-KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 152 (540)
..++.|+|++|+++. +|. +..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 378999999999994 554 55555 999999999999965 6799999999999999999944334458999999999
Q ss_pred ccCccCCCCCCc--cccCCccccEEecccCcccccCCC
Q 009208 153 LNNNSLTGSCPE--SLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 153 l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
|++|+++ .+|. .+..+++|+.|++++|+++. +|.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~ 130 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKH 130 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STT
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHh
Confidence 9999997 6776 78899999999999999984 444
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.43 E-value=1e-13 Score=147.11 Aligned_cols=126 Identities=17% Similarity=0.249 Sum_probs=80.5
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcc--cCCccccCCCCcchhh
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG--EIPDSLGDLGNLNYLR 152 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~ 152 (540)
+++.|++++|++.... .+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .+|..+..+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 4666777777665321 12566677777777777776666677777777777777777764 4455666777777777
Q ss_pred ccCccCCCCCCcc-ccCCccccEEecccCcccccCCCCC---cccccccCCCCC
Q 009208 153 LNNNSLTGSCPES-LSKIESLTLVDLSYNNLSGSLPKIS---ARTFKVTGNPLI 202 (540)
Q Consensus 153 l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~---~~~~~~~~n~~~ 202 (540)
|++|++++.+|.. +..+++|+.|++++|++++.+|... .+.+++++|.+.
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 7777777545543 6666777777777777766555432 245566666654
No 352
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.43 E-value=9.1e-14 Score=148.49 Aligned_cols=117 Identities=19% Similarity=0.209 Sum_probs=104.9
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcc-cCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTG-EIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~ 152 (540)
.++++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 479999999999998888999999999999999999998877779999999999999999996 4678899999999999
Q ss_pred ccCccCCCCCC-ccccCCccccEEecccCcccccCCCCC
Q 009208 153 LNNNSLTGSCP-ESLSKIESLTLVDLSYNNLSGSLPKIS 190 (540)
Q Consensus 153 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~ 190 (540)
+++|++.+.+| ..|.++++|+.|++++|++++.+|...
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 99999555665 689999999999999999998777653
No 353
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.42 E-value=3.9e-14 Score=123.90 Aligned_cols=104 Identities=25% Similarity=0.249 Sum_probs=93.3
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCccc-CCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE-IPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~ 152 (540)
.+++.|+|++|.+++. ..++++++|++|+|++|.+++.+|..+.++++|++|+|++|++++. .|..+..+++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5799999999999976 8899999999999999999987898888899999999999999952 348899999999999
Q ss_pred ccCccCCCCCC---ccccCCccccEEeccc
Q 009208 153 LNNNSLTGSCP---ESLSKIESLTLVDLSY 179 (540)
Q Consensus 153 l~~N~l~~~~p---~~~~~l~~L~~L~l~~ 179 (540)
+++|++++..+ ..+..+++|+.|++++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999996554 4789999999999874
No 354
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.42 E-value=2.2e-13 Score=131.19 Aligned_cols=121 Identities=24% Similarity=0.327 Sum_probs=87.8
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++..+ +.++++|++|+|++|++++ +|. +.. ++|++|+|++|+|++ +| .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 368888888888885433 7888888888888888884 443 333 788888888888884 44 5788888888888
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (540)
++|++++ +| .+..+++|+.|++++|++++. +.+.. +.+++++|++.+.
T Consensus 136 s~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 136 RNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCcCCC-Ch-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCC
Confidence 8888884 44 677888888888888888865 33321 4567778877554
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.42 E-value=1.6e-13 Score=150.89 Aligned_cols=169 Identities=24% Similarity=0.203 Sum_probs=107.0
Q ss_pred CCchHHHHHHHHHHhcC-CCCCccCCCCCCCCCCccceeeeecCCCcE------------------EEecCCCCCCcc--
Q 009208 30 GINYEVVALVAVKNNLH-DPYNVLENWDITSVDPCSWRMITCSPDGYV------------------SALGLPSQSLSG-- 88 (540)
Q Consensus 30 ~~~~~~~~l~~~k~~~~-~~~~~~~~w~~~~~~~c~w~gv~c~~~~~l------------------~~l~l~~~~l~~-- 88 (540)
....++.+|+++..+.. .....-.+|..+....+.|.+++++. +++ ..++|+.|.|.+
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~ 207 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDD 207 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchhhHhhcCccCcccccCcc
Confidence 34456678888887762 22333445755555667788877654 223 334444444443
Q ss_pred -------ccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCC
Q 009208 89 -------TLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGS 161 (540)
Q Consensus 89 -------~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 161 (540)
..+..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|+|+ .+|..|++|++|+.|+|++|+|+ .
T Consensus 208 ~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~ 284 (727)
T 4b8c_D 208 DIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-S 284 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-S
T ss_pred ccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-c
Confidence 33677889999999999999999 78888889999999999999999 99999999999999999999999 8
Q ss_pred CCccccCCccccEEecccCcccccCCCCCc-----ccccccCCCCCc
Q 009208 162 CPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKVTGNPLIC 203 (540)
Q Consensus 162 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~~~ 203 (540)
+|..|.+|++|++|+|++|.|+ .+|.... +.+++++|++..
T Consensus 285 lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 285 LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp CCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred cChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC
Confidence 8999999999999999999998 6665332 567899998854
No 356
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.42 E-value=4.8e-14 Score=127.14 Aligned_cols=105 Identities=24% Similarity=0.306 Sum_probs=95.3
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCc--cccCCCCcchhh
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD--SLGDLGNLNYLR 152 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~ 152 (540)
+++.|+|++|.|++. +.++++++|++|+|++|+|++..|..|..+++|++|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 799999999999975 78999999999999999999655555699999999999999997 7887 899999999999
Q ss_pred ccCccCCCCCCcc----ccCCccccEEecccCccc
Q 009208 153 LNNNSLTGSCPES----LSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 153 l~~N~l~~~~p~~----~~~l~~L~~L~l~~N~l~ 183 (540)
+++|.++ .+|.. +..+++|+.|++++|.+.
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999 67775 899999999999999876
No 357
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.42 E-value=8.5e-14 Score=137.55 Aligned_cols=128 Identities=21% Similarity=0.235 Sum_probs=107.0
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCC--C--CcccCCCCcccEEEeeCCCCcccCCc----cccCC
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGP--I--PASLGKLEKLQTLDLSNNKFTGEIPD----SLGDL 145 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~ls~N~l~~~~p~----~~~~l 145 (540)
.+++.|+|++|.+++..+..++++++|++|+|++|++.+. + +..+.++++|++|+|++|+++ .+|. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 4799999999999988889999999999999999998752 2 233478999999999999998 5554 25788
Q ss_pred CCcchhhccCccCCCCCCccccCC---ccccEEecccCcccccCCCCCc---ccccccCCCCCc
Q 009208 146 GNLNYLRLNNNSLTGSCPESLSKI---ESLTLVDLSYNNLSGSLPKISA---RTFKVTGNPLIC 203 (540)
Q Consensus 146 ~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~l~~N~l~~~~p~~~~---~~~~~~~n~~~~ 203 (540)
++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|.... +.+++++|.+..
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~l~~ 286 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNRLNR 286 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCCCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCcCCC
Confidence 999999999999998878888777 69999999999999 5555322 667899998753
No 358
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.41 E-value=9.2e-14 Score=146.06 Aligned_cols=126 Identities=24% Similarity=0.278 Sum_probs=66.5
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCc----------------ccCCCCcccEEEeeCCCCcccC
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPA----------------SLGKLEKLQTLDLSNNKFTGEI 138 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~----------------~~~~l~~L~~L~ls~N~l~~~~ 138 (540)
.++.|+|++|.+++..| ++++++|++|+|++|.|++..+. ....+++|+.|+|++|+|++..
T Consensus 59 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~ 136 (487)
T 3oja_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLR 136 (487)
T ss_dssp TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGG
T ss_pred CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCC
Confidence 56666666666665444 55555555555555554421110 0012344555555555555555
Q ss_pred CccccCCCCcchhhccCccCCCCCCcccc-CCccccEEecccCcccccCCCCC---cccccccCCCCC
Q 009208 139 PDSLGDLGNLNYLRLNNNSLTGSCPESLS-KIESLTLVDLSYNNLSGSLPKIS---ARTFKVTGNPLI 202 (540)
Q Consensus 139 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~---~~~~~~~~n~~~ 202 (540)
|..++.+++|+.|+|++|++++..|..+. .+++|+.|+|++|.|++..+... .+.+++++|.+.
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp GBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCC
T ss_pred chhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCC
Confidence 55566666666666666666655555554 55666666666666654433221 134455555553
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.39 E-value=5.3e-13 Score=130.50 Aligned_cols=120 Identities=28% Similarity=0.421 Sum_probs=90.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+ +.++++|++|+|++|.+++ +| .+.++++|++|+|++|++++ + +.+..+++|+.|++
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 468888888888885443 8888888888888888884 34 48888888888888888884 4 45778888888888
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~ 202 (540)
++|++++. ..+..+++|+.|++++|++++..| +.. +.+++++|.+.
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCC
Confidence 88888843 567888888888888888886554 221 45667777653
No 360
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=4e-13 Score=134.83 Aligned_cols=104 Identities=23% Similarity=0.313 Sum_probs=92.3
Q ss_pred CEEEcccC-CCCCCCCcccCCCCcccEEEeeC-CCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecc
Q 009208 101 QSVLLQNN-AILGPIPASLGKLEKLQTLDLSN-NKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLS 178 (540)
Q Consensus 101 ~~L~l~~N-~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (540)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35689988 899 6888 99999999999996 99997766889999999999999999998888899999999999999
Q ss_pred cCcccccCCCCCc----ccccccCCCCCcCCC
Q 009208 179 YNNLSGSLPKISA----RTFKVTGNPLICGPK 206 (540)
Q Consensus 179 ~N~l~~~~p~~~~----~~~~~~~n~~~~~~~ 206 (540)
+|+|++.+|..+. +.+++.+|++.|.|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 9999977666543 567899999999865
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.38 E-value=4.9e-13 Score=130.79 Aligned_cols=122 Identities=28% Similarity=0.370 Sum_probs=103.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++ + +.+.++++|++|+|++|++++. +.+..+++|++|+|++|++++ + ..+..+++|+.|+|
T Consensus 90 ~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 163 (291)
T ss_dssp TTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEc
Confidence 579999999999986 3 3499999999999999999964 579999999999999999995 4 67999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (540)
++|++++..| +..+++|+.|++++|++++ +|.+.. +.+++.+|++.+.
T Consensus 164 ~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 164 EDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEEECC
T ss_pred cCCccccchh--hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcccCC
Confidence 9999995544 9999999999999999995 444322 5678888887553
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.38 E-value=7.5e-13 Score=127.43 Aligned_cols=121 Identities=21% Similarity=0.312 Sum_probs=101.6
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|++++|+++ .++ .+..+++|++|+|++|+|++. |. +.++++|++|+|++|+++ .+|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEc
Confidence 47999999999998 455 799999999999999999965 44 999999999999999999 5665433 99999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (540)
++|++++ ++ .+..+++|+.|++++|++++. |.+.. +.+++++|.+...
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCBC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcch
Confidence 9999995 54 699999999999999999964 43321 5678899987543
No 363
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.37 E-value=4.3e-13 Score=132.34 Aligned_cols=122 Identities=25% Similarity=0.363 Sum_probs=96.9
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++ + +.+.++++|++|+|++|++++ +| .+..+++|++|+|++|++++ +|. +..+++|+.|+|
T Consensus 85 ~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKN-V-SAIAGLQSIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSC-C-GGGTTCTTCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCC-c-hhhcCCCCCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEc
Confidence 479999999999985 3 368899999999999999985 44 38889999999999999984 444 888899999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCC----cccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS----ARTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~~~~~~~n~~~~~ 204 (540)
++|++++ ++. +..+++|+.|++++|++++..| +. .+.+++++|.+...
T Consensus 159 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~ 210 (308)
T 1h6u_A 159 GNAQVSD-LTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDV 210 (308)
T ss_dssp CSSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBC
T ss_pred cCCcCCC-Chh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcc
Confidence 9999984 444 8888999999999999886543 21 15567888877544
No 364
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.36 E-value=2.3e-15 Score=138.57 Aligned_cols=125 Identities=23% Similarity=0.316 Sum_probs=78.0
Q ss_pred cEEEecCCCCCCccccCc------cccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCc
Q 009208 75 YVSALGLPSQSLSGTLSP------WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNL 148 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 148 (540)
+++.++++.+.++|.+|. .+.++++|++|+|++|.+++ +| .+.++++|++|+|++|+|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455556666666665555 66667777777777777764 55 6666777777777777776 566666666677
Q ss_pred chhhccCccCCCCCCccccCCccccEEecccCcccccCC-----CC-CcccccccCCCCCcC
Q 009208 149 NYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLP-----KI-SARTFKVTGNPLICG 204 (540)
Q Consensus 149 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-----~~-~~~~~~~~~n~~~~~ 204 (540)
+.|+|++|++++ +| .+..+++|+.|++++|++++..+ .. ..+.+++.+|++.+.
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 777777777763 44 46666777777777777664211 11 114456666665443
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.35 E-value=1.2e-12 Score=129.12 Aligned_cols=120 Identities=25% Similarity=0.443 Sum_probs=88.5
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++. ++ +.++++|++|+|++|++++ +| .+.++++|++|+|++|++++ +|. +..+++|++|++
T Consensus 63 ~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 4688888888888754 33 8888888888888888885 33 68888888888888888884 544 788888888888
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~ 202 (540)
++|++++ ++. +..+++|+.|++++|++++..+ +.. +.+++++|.+.
T Consensus 137 ~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 137 DLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred CCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccC
Confidence 8888884 333 7788888888888888885433 211 45667777653
No 366
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.34 E-value=1e-12 Score=131.69 Aligned_cols=121 Identities=21% Similarity=0.319 Sum_probs=67.4
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|++++|.+++..+ +..+++|++|+|++|.+++. |. +..+++|++|+|++|++++ + +.+..+++|++|+++
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVG 273 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEcc
Confidence 45666666666654333 55666666666666666633 22 5566666666666666653 3 345566666666666
Q ss_pred CccCCCCCCccccCCccccEEecccCcccccCCCCC-----cccccccCCCCCc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS-----ARTFKVTGNPLIC 203 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-----~~~~~~~~n~~~~ 203 (540)
+|++++ + ..+..+++|+.|++++|++++..|... .+.+++++|++..
T Consensus 274 ~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 274 SNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp SSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred CCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 666653 2 235556666666666666655443321 1345556665543
No 367
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.34 E-value=1.3e-12 Score=131.32 Aligned_cols=140 Identities=18% Similarity=0.181 Sum_probs=99.8
Q ss_pred CccceeeeecCC----------CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCC-cccCCCCcccE-EEe
Q 009208 62 PCSWRMITCSPD----------GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIP-ASLGKLEKLQT-LDL 129 (540)
Q Consensus 62 ~c~w~gv~c~~~----------~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~-L~l 129 (540)
-|+|+.|.|+.. ..++.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|++ +++
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 378999999742 357888888888885445678888888888888888876555 46778887765 566
Q ss_pred eCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEeccc-CcccccCCCCCc------ccccccCCCC
Q 009208 130 SNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSY-NNLSGSLPKISA------RTFKVTGNPL 201 (540)
Q Consensus 130 s~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~------~~~~~~~n~~ 201 (540)
+.|+|++..|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..+. ..+.+++|.+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 77888866677788888888888888888865555666677777787765 455533222211 2345666665
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.33 E-value=2.1e-12 Score=138.68 Aligned_cols=120 Identities=29% Similarity=0.419 Sum_probs=81.1
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+|+.|+|++|.|++..| +.++++|+.|+|++|.|++ +| .+..+++|+.|+|++|+|++ + +.+..+++|+.|+|
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 367778888887775443 7777777777777777774 33 57777777777777777773 3 34677777777777
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~ 202 (540)
++|+|++. ..+..+++|+.|+|++|+|++.+| +.. +.+++++|.+.
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCC
Confidence 77777743 456777777777777777776554 211 44566666553
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.32 E-value=1.9e-12 Score=138.97 Aligned_cols=122 Identities=28% Similarity=0.374 Sum_probs=103.9
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.|++ + +.+.++++|+.|+|++|.|++ + +.+..+++|+.|+|++|+|++ + ..+..+++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEEC
Confidence 479999999999985 3 479999999999999999995 3 469999999999999999995 4 67999999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~~~ 204 (540)
++|+|++..| +..+++|+.|+|++|+|++. |.+.. +.+++.+|++...
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCC
Confidence 9999996655 99999999999999999964 44322 5678888887544
No 370
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.30 E-value=2.2e-12 Score=127.75 Aligned_cols=112 Identities=25% Similarity=0.281 Sum_probs=99.0
Q ss_pred CcEEEecCCCCCCccccCccc-cCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhh
Q 009208 74 GYVSALGLPSQSLSGTLSPWI-GNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLR 152 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 152 (540)
.+++.|+|++|.+++..+..+ .++++|++|+|++|.+++. | ....+++|++|+|++|+|+ .+|..+..+++|+.|+
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 220 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWIS 220 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEE
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEEE
Confidence 479999999999998877777 4799999999999999955 4 3446999999999999999 6777799999999999
Q ss_pred ccCccCCCCCCccccCCccccEEecccCccc-ccCCCC
Q 009208 153 LNNNSLTGSCPESLSKIESLTLVDLSYNNLS-GSLPKI 189 (540)
Q Consensus 153 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~~ 189 (540)
|++|+++ .+|..+..+++|+.|++++|+++ +.+|..
T Consensus 221 L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 221 LRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp CTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred CcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 9999999 68889999999999999999999 555544
No 371
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.29 E-value=1e-12 Score=141.33 Aligned_cols=136 Identities=23% Similarity=0.316 Sum_probs=91.7
Q ss_pred CccCCCCCCCCCCccceeeeecC-------CCcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCC
Q 009208 50 NVLENWDITSVDPCSWRMITCSP-------DGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLE 122 (540)
Q Consensus 50 ~~~~~w~~~~~~~c~w~gv~c~~-------~~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 122 (540)
...++|. .+.+||.|+|..|.. ...++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .++
T Consensus 10 ~~w~~W~-~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 10 AVWSAWR-RAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp CHHHHHH-HTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHH-hcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 3455675 346788886643221 134788888888888 6777665 78888888888888 5665 567
Q ss_pred cccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc--ccccccCCC
Q 009208 123 KLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA--RTFKVTGNP 200 (540)
Q Consensus 123 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~~~~~~~n~ 200 (540)
+|++|+|++|+|+ .+|. .+++|++|+|++|+++ .+|. .+++|+.|++++|+|++ +|.... +.+++++|.
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N~ 152 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDNQ 152 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCCc
Confidence 8888888888888 6776 5677888888888887 4554 45667777777777764 333211 445666665
Q ss_pred CC
Q 009208 201 LI 202 (540)
Q Consensus 201 ~~ 202 (540)
+.
T Consensus 153 l~ 154 (622)
T 3g06_A 153 LA 154 (622)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 372
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=1.2e-11 Score=118.97 Aligned_cols=147 Identities=13% Similarity=0.061 Sum_probs=113.4
Q ss_pred HHHHhcCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CCCccceeEEEecCCeeE
Q 009208 296 LRAATSNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTENERL 374 (540)
Q Consensus 296 l~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 374 (540)
+.....+|......+.|+.+.||+... +++.+++|....... .....+.+|.++++.+. +..+.++++++...+..+
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 344556788888888889999999976 478999999864221 12235888999998884 677888999998888999
Q ss_pred EEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------------------------------
Q 009208 375 LVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ--------------------------------- 421 (540)
Q Consensus 375 lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------- 421 (540)
+||||++|.+|.+.+.. ......++.++++++..||+.
T Consensus 87 lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 99999999998775321 112346888999999999981
Q ss_pred -----------------------CCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 422 -----------------------CDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 422 -----------------------~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
..+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01469999999999999876556799999875
No 373
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.28 E-value=3.9e-12 Score=133.03 Aligned_cols=102 Identities=28% Similarity=0.421 Sum_probs=55.9
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
+++.|++++|.+++..+ +.++++|+.|+|++|.+++..| +..+++|+.|+|++|++++. +. +..+++|+.|+|+
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~ 317 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLY 317 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECC
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECc
Confidence 56666666666664333 5566666666666666664322 55556666666666665532 22 4555555555555
Q ss_pred CccCCCCCCccccCCccccEEecccCcccc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
+|++++..| +..+++|+.|++++|++++
T Consensus 318 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 318 FNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp SSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCcCCCchh--hccCccCCEeECCCCccCC
Confidence 555554333 4455555555555555553
No 374
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.27 E-value=2.3e-14 Score=131.89 Aligned_cols=109 Identities=22% Similarity=0.280 Sum_probs=98.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+..+++|++|+|++|+|++ +| .+..+++|+.|+|
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 479999999999996 67 8999999999999999999 788888889999999999999994 66 6899999999999
Q ss_pred cCccCCCCCC--ccccCCccccEEecccCcccccCCC
Q 009208 154 NNNSLTGSCP--ESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 154 ~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
++|++++ +| ..+..+++|+.|++++|++++.+|.
T Consensus 123 ~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCc-hhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999994 44 4789999999999999999988765
No 375
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.26 E-value=4.5e-12 Score=135.25 Aligned_cols=102 Identities=23% Similarity=0.304 Sum_probs=90.1
Q ss_pred ccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecc
Q 009208 99 KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLS 178 (540)
Q Consensus 99 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 178 (540)
.|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..++++++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 46789999999995 776 999999999999999999 999999999999999999999995 78 89999999999999
Q ss_pred cCcccccC-CCCCc-----ccccccCCCCCcCC
Q 009208 179 YNNLSGSL-PKISA-----RTFKVTGNPLICGP 205 (540)
Q Consensus 179 ~N~l~~~~-p~~~~-----~~~~~~~n~~~~~~ 205 (540)
+|+|++.+ |.... +.+++++|++...+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 99999886 65432 56789999875443
No 376
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.25 E-value=5.6e-12 Score=134.03 Aligned_cols=112 Identities=24% Similarity=0.329 Sum_probs=80.7
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|+
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 56666666666665 554 56778888888888885 665 56788999999999884 777 65 888888888
Q ss_pred CccCCCCCCccccCCccc-------cEEecccCcccccCCC-CCc----ccccccCCCCCc
Q 009208 155 NNSLTGSCPESLSKIESL-------TLVDLSYNNLSGSLPK-ISA----RTFKVTGNPLIC 203 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L-------~~L~l~~N~l~~~~p~-~~~----~~~~~~~n~~~~ 203 (540)
+|+|+ .+|. +.. +| +.|+|++|+|+. +|. +.. +.+++++|++.+
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCH
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCC
Confidence 88888 7777 554 67 888888888884 554 221 456788888754
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.22 E-value=2.8e-11 Score=126.04 Aligned_cols=99 Identities=26% Similarity=0.330 Sum_probs=61.1
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
+++.|+|++|.+++. | .++++++|++|+|++|++++. | ++.+++|++|+|++|+|++ +| ++++++|++|+++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 566666666666643 3 566666666666666666643 3 6666666666666666663 33 5666666666666
Q ss_pred CccCCCCCCccccCCccccEEecccCcccc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
+|++++ +| +..+++|+.|++++|++++
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~ 141 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTE 141 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSC
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCccce
Confidence 666664 33 5666666666666666665
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.22 E-value=1.4e-11 Score=128.68 Aligned_cols=123 Identities=30% Similarity=0.392 Sum_probs=96.0
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|++++|.+++. +.+..+++|+.|+|++|.+++..| +..+++|++|+|++|++++ +|. +..+++|+.|+|
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEc
Confidence 4688899999988853 467888999999999999986544 8888999999999999984 444 888899999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCC---CcccccccCCCCCcC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI---SARTFKVTGNPLICG 204 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---~~~~~~~~~n~~~~~ 204 (540)
++|++++..| +..+++|+.|++++|++++..|-. ..+.+++.+|++...
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCCCCC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchhhccCccCCEeECCCCccCCc
Confidence 9999985433 788899999999999998766521 115567788876543
No 379
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.22 E-value=9.6e-12 Score=124.64 Aligned_cols=121 Identities=24% Similarity=0.353 Sum_probs=104.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++. +.+..+++|++|++++|++++ + +.+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEEC
Confidence 479999999999996443 99999999999999999964 479999999999999999994 4 46899999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCC----cccccccCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKIS----ARTFKVTGNPL 201 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~~~~~~~n~~ 201 (540)
++|++++..|..+..+++|+.|++++|++++.+| +. .+.+++.+|++
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQVI 345 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC--
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhcc
Confidence 9999998888899999999999999999998776 22 15678888876
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.18 E-value=4.1e-11 Score=124.75 Aligned_cols=104 Identities=21% Similarity=0.197 Sum_probs=88.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
..++.|++++|...+.+ .++.+++|+.|+|++|++++ +| +..+++|+.|++++|++++ + .++.+++|+.|++
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSC-C--CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCe-e--ccccCCCCCEEEC
Confidence 47889999999766666 58889999999999999996 55 8889999999999999995 3 3888999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 188 (540)
++|++++ +| +..+++|+.|++++|++++..+.
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 9999996 66 88899999999999999976544
No 381
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.18 E-value=3.5e-11 Score=115.25 Aligned_cols=137 Identities=14% Similarity=0.052 Sum_probs=99.9
Q ss_pred cCCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCC--ccceeEEEecCCeeEEEEe
Q 009208 301 SNFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRLCGFCSTENERLLVYP 378 (540)
Q Consensus 301 ~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lV~e 378 (540)
.++......+.|..+.||+....+|..+++|...... ...+.+|.++++.+.+.+ +.+++++....+..++|||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3444433334556699999988778889999976531 135778999998886545 4568888887788899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------------------------------------ 422 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 422 (540)
|++|.++. ... .+ ...++.++++.+..||+..
T Consensus 96 ~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 96 EVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp CCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred ecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99998874 211 11 2356778888888888642
Q ss_pred -------------------CCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 423 -------------------DPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 423 -------------------~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
...++|+|++|.||+++++..+.|+|||.+.
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1239999999999999877666799999875
No 382
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.17 E-value=6.8e-11 Score=122.96 Aligned_cols=96 Identities=26% Similarity=0.397 Sum_probs=62.2
Q ss_pred CccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEec
Q 009208 98 TKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDL 177 (540)
Q Consensus 98 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 177 (540)
++|++|+|++|++++ +| +|+++++|++|++++|+++ .+|..+ ++|++|++++|++++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~-~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLK-KLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCS-CCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCc-ccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 466777777777774 56 4777777777777777777 355543 467777777777774 55 4777777777777
Q ss_pred ccCcccccCCCCC--cccccccCCCCC
Q 009208 178 SYNNLSGSLPKIS--ARTFKVTGNPLI 202 (540)
Q Consensus 178 ~~N~l~~~~p~~~--~~~~~~~~n~~~ 202 (540)
++|++++ +|... .+.+++++|.+.
T Consensus 203 ~~N~l~~-l~~~~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 203 DNNSLKK-LPDLPLSLESIVAGNNILE 228 (454)
T ss_dssp CSSCCSS-CCCCCTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCcCcccEEECcCCcCC
Confidence 7777775 34332 245566666553
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.17 E-value=8.6e-11 Score=122.16 Aligned_cols=116 Identities=26% Similarity=0.329 Sum_probs=90.7
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.+++.|+|++|.+++ +| +++++++|++|++++|++++ +|..+ .+|++|+|++|++++ +| .++++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 478999999999996 77 69999999999999999995 67544 589999999999995 77 5888999999999
Q ss_pred cCccCCCCCCccccCCccccEEecccCcccccCCCCCc----ccccccCCCCC
Q 009208 154 NNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA----RTFKVTGNPLI 202 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~----~~~~~~~n~~~ 202 (540)
++|++++ +|... ++|+.|++++|+++ .+|++.. +.+++++|.+.
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCCCTTCTTCCEEECCSSCCS
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccccCCCCCCCEEECCCCcCC
Confidence 9998884 55433 47778888888877 5665322 44566777653
No 384
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.15 E-value=1.2e-12 Score=133.38 Aligned_cols=110 Identities=21% Similarity=0.273 Sum_probs=55.1
Q ss_pred cEEEecCCCCCCcc----ccCccccCC---------CccCEEEcccCCCC-CCCC---cccCCCCcccEEEeeCCCCc--
Q 009208 75 YVSALGLPSQSLSG----TLSPWIGNL---------TKLQSVLLQNNAIL-GPIP---ASLGKLEKLQTLDLSNNKFT-- 135 (540)
Q Consensus 75 ~l~~l~l~~~~l~~----~~~~~~~~l---------~~L~~L~l~~N~l~-~~~p---~~~~~l~~L~~L~ls~N~l~-- 135 (540)
+++.|+|++|.+++ .++..+..+ ++|++|+|++|+++ +.+| ..+..+++|++|+|++|+|+
T Consensus 123 ~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~ 202 (386)
T 2ca6_A 123 PLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE 202 (386)
T ss_dssp TCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH
T ss_pred CCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh
Confidence 45555555555542 233444444 55555555555554 2233 23444555555555555554
Q ss_pred c---cCCccccCCCCcchhhccCccCC----CCCCccccCCccccEEecccCcccc
Q 009208 136 G---EIPDSLGDLGNLNYLRLNNNSLT----GSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 136 ~---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++
T Consensus 203 g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~ 258 (386)
T 2ca6_A 203 GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSA 258 (386)
T ss_dssp HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCH
T ss_pred HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCch
Confidence 1 22334555555555555555553 3444555555555555555555543
No 385
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.14 E-value=5.6e-12 Score=127.28 Aligned_cols=128 Identities=21% Similarity=0.238 Sum_probs=93.3
Q ss_pred cEEEecCCCCCCccccC----ccccCCC-ccCEEEcccCCCCCCCCcccCCC-----CcccEEEeeCCCCcccCCcccc-
Q 009208 75 YVSALGLPSQSLSGTLS----PWIGNLT-KLQSVLLQNNAILGPIPASLGKL-----EKLQTLDLSNNKFTGEIPDSLG- 143 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~----~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~~~~p~~~~- 143 (540)
.++.|+|++|.|++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++|++|+|++|++++..+..+.
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~ 102 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVK 102 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHH
Confidence 48888888888886655 6777888 88889998888887777777665 8888899998888866665443
Q ss_pred ---CC-CCcchhhccCccCCCCCCccc----cC-CccccEEecccCcccccCCC----------CCcccccccCCCCC
Q 009208 144 ---DL-GNLNYLRLNNNSLTGSCPESL----SK-IESLTLVDLSYNNLSGSLPK----------ISARTFKVTGNPLI 202 (540)
Q Consensus 144 ---~l-~~L~~L~l~~N~l~~~~p~~~----~~-l~~L~~L~l~~N~l~~~~p~----------~~~~~~~~~~n~~~ 202 (540)
.+ ++|++|+|++|++++..+..+ .. .++|+.|+|++|++++..+. ...+.+++++|.+.
T Consensus 103 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 103 TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 34 788888999888886555443 33 25888889998888842211 12356677777663
No 386
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.12 E-value=3e-10 Score=114.40 Aligned_cols=142 Identities=14% Similarity=0.200 Sum_probs=105.6
Q ss_pred CCeeeeccCccEEEEEeCCCcEEEEEEec--cCCccccHHHHHHHHHHHhccc--CCCccceeEEEecC---CeeEEEEe
Q 009208 306 KNILGRGGFGIVYKGCFSDGALVAVKRLK--DYNIAGGEVQFQTEVETISLAV--HRNLLRLCGFCSTE---NERLLVYP 378 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~---~~~~lV~e 378 (540)
.+.++.|.++.||+.... +..+++|+.. ..........+.+|.++++.+. +..+.+++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 467899999999999875 4678888875 3322223346788999998886 45578888888766 45899999
Q ss_pred cCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 009208 379 YMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------------------------------------ 422 (540)
Q Consensus 379 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------ 422 (540)
|++|..+.+.. ...++...+..++.++++.|..||...
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99998764421 124678888899999999999999731
Q ss_pred -------------------CCCeEecCCCCCceeeCCCCC--eEEcccccccc
Q 009208 423 -------------------DPKIIHRDVKAANILLDEDFE--AVVGDFGLAKL 454 (540)
Q Consensus 423 -------------------~~~ivH~Dlk~~NILl~~~~~--~kl~Dfgla~~ 454 (540)
.+.++|||+++.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998863
No 387
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.10 E-value=3.7e-12 Score=129.78 Aligned_cols=130 Identities=22% Similarity=0.291 Sum_probs=108.3
Q ss_pred CcEEEecCCCCCCc-cccC---ccccCCCccCEEEcccCCCC--C---CCCcccCCCCcccEEEeeCCCCc----ccCCc
Q 009208 74 GYVSALGLPSQSLS-GTLS---PWIGNLTKLQSVLLQNNAIL--G---PIPASLGKLEKLQTLDLSNNKFT----GEIPD 140 (540)
Q Consensus 74 ~~l~~l~l~~~~l~-~~~~---~~~~~l~~L~~L~l~~N~l~--~---~~p~~~~~l~~L~~L~ls~N~l~----~~~p~ 140 (540)
.+++.|+|++|.++ +.++ ..+.++++|+.|+|++|+++ | ..|..+.++++|++|+|++|+|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 58999999999998 4455 57788999999999999998 3 34557889999999999999996 67899
Q ss_pred cccCCCCcchhhccCccCCCC----CCccc--cCCccccEEecccCcccc----cCCCCC------cccccccCCCCCc
Q 009208 141 SLGDLGNLNYLRLNNNSLTGS----CPESL--SKIESLTLVDLSYNNLSG----SLPKIS------ARTFKVTGNPLIC 203 (540)
Q Consensus 141 ~~~~l~~L~~L~l~~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~~p~~~------~~~~~~~~n~~~~ 203 (540)
.+..+++|+.|+|++|++++. +|..+ ..+++|+.|+|++|++++ .+|... .+.+++.+|++..
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 999999999999999999865 56666 449999999999999997 355422 2567889998754
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.10 E-value=2.5e-12 Score=128.22 Aligned_cols=128 Identities=21% Similarity=0.290 Sum_probs=100.3
Q ss_pred CcEEEecCCCCCCccc-cCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCC-CCcc-cCCccccCCCCcch
Q 009208 74 GYVSALGLPSQSLSGT-LSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNN-KFTG-EIPDSLGDLGNLNY 150 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N-~l~~-~~p~~~~~l~~L~~ 150 (540)
.+++.|+|++|.+++. ++..+.++++|++|+|++|.+++..|..+.++++|++|+|++| .+++ .+|..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 4788899999988866 7888888999999999999888778888888999999999998 6775 36777888889999
Q ss_pred hhccCc-cCCCC-CCccccCCc-cccEEecccC--ccc-ccCCCCC-----cccccccCCCC
Q 009208 151 LRLNNN-SLTGS-CPESLSKIE-SLTLVDLSYN--NLS-GSLPKIS-----ARTFKVTGNPL 201 (540)
Q Consensus 151 L~l~~N-~l~~~-~p~~~~~l~-~L~~L~l~~N--~l~-~~~p~~~-----~~~~~~~~n~~ 201 (540)
|++++| .+++. ++..+..++ +|+.|++++| .++ +.+|... .+.+++++|..
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~ 234 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM 234 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCc
Confidence 999998 88753 566778888 8899999888 455 3333321 25667777773
No 389
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.10 E-value=2.7e-12 Score=127.97 Aligned_cols=117 Identities=20% Similarity=0.222 Sum_probs=64.2
Q ss_pred CccceeeeecCCCcEEEecCCCCCCccccCccccCC--CccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCccc-C
Q 009208 62 PCSWRMITCSPDGYVSALGLPSQSLSGTLSPWIGNL--TKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGE-I 138 (540)
Q Consensus 62 ~c~w~gv~c~~~~~l~~l~l~~~~l~~~~~~~~~~l--~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~-~ 138 (540)
|..|.++.|++ ..++.|+++++.+. +..+..+ ++++.|++++|.+++..|. +.++++|++|+|++|++++. +
T Consensus 36 c~~W~~~~~~~-~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~ 110 (336)
T 2ast_B 36 CKRWYRLASDE-SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTL 110 (336)
T ss_dssp CHHHHHHHTCS-TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHH
T ss_pred HHHHHHHhcCc-hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHH
Confidence 34566665542 23555666655554 3334444 5556666666665544443 44555666666666655543 5
Q ss_pred CccccCCCCcchhhccCccCCCCCCccccCCccccEEecccC-ccc
Q 009208 139 PDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYN-NLS 183 (540)
Q Consensus 139 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N-~l~ 183 (540)
|..+..+++|++|+|++|++++..|..++.+++|++|++++| .++
T Consensus 111 ~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~ 156 (336)
T 2ast_B 111 HGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFS 156 (336)
T ss_dssp HHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCC
T ss_pred HHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 555555566666666666555555555555566666666665 444
No 390
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.10 E-value=1e-10 Score=125.78 Aligned_cols=72 Identities=32% Similarity=0.400 Sum_probs=43.0
Q ss_pred CcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccccEEecccCcccccCCCCCc-----ccccc
Q 009208 122 EKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKISA-----RTFKV 196 (540)
Q Consensus 122 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~~~~~ 196 (540)
++|++|+|++|+|+ .+| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|.... +.+++
T Consensus 221 ~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 55666666666666 355 34466666677777666 4554 4566667777777766 4443221 34566
Q ss_pred cCCCCC
Q 009208 197 TGNPLI 202 (540)
Q Consensus 197 ~~n~~~ 202 (540)
++|++.
T Consensus 292 ~~N~l~ 297 (622)
T 3g06_A 292 EGNPLS 297 (622)
T ss_dssp CSCCCC
T ss_pred cCCCCC
Confidence 666654
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.09 E-value=5.6e-12 Score=127.28 Aligned_cols=113 Identities=23% Similarity=0.236 Sum_probs=69.5
Q ss_pred cEEEecCCCCCCccccCccccCC-----CccCEEEcccCCCCCCCCcccCC----C-CcccEEEeeCCCCcccCCcccc-
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNL-----TKLQSVLLQNNAILGPIPASLGK----L-EKLQTLDLSNNKFTGEIPDSLG- 143 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~----l-~~L~~L~ls~N~l~~~~p~~~~- 143 (540)
+++.|+|++|.|++..+..+..+ ++|++|+|++|.+++..+..+.. + ++|++|+|++|+|++..+..+.
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 57777777777776555555554 77777777777777555543333 3 6777777777777644443332
Q ss_pred ---C-CCCcchhhccCccCCCCC----CccccCCc-cccEEecccCcccccCC
Q 009208 144 ---D-LGNLNYLRLNNNSLTGSC----PESLSKIE-SLTLVDLSYNNLSGSLP 187 (540)
Q Consensus 144 ---~-l~~L~~L~l~~N~l~~~~----p~~~~~l~-~L~~L~l~~N~l~~~~p 187 (540)
. .++|++|+|++|++++.. +..+..++ +|+.|+|++|++++..+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 2 247777777777776432 22334444 67777777777765443
No 392
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.09 E-value=9.8e-11 Score=117.53 Aligned_cols=115 Identities=12% Similarity=0.123 Sum_probs=95.2
Q ss_pred eeecCCCcEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCc-cccCCC
Q 009208 68 ITCSPDGYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPD-SLGDLG 146 (540)
Q Consensus 68 v~c~~~~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~ 146 (540)
.+|+. ++++.++++|+ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+|. .|.+++
T Consensus 7 C~C~~----~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 7 CHCSN----RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp SEEET----TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred cEeeC----CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 45653 34678899999 788766 36899999999999955556899999999999999999767775 578898
Q ss_pred Ccch-hhccCccCCCCCCccccCCccccEEecccCcccccCCCC
Q 009208 147 NLNY-LRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSGSLPKI 189 (540)
Q Consensus 147 ~L~~-L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~ 189 (540)
+|++ +.+++|+++...|..|..+++|++|++++|++++..+..
T Consensus 80 ~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~ 123 (350)
T 4ay9_X 80 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVH 123 (350)
T ss_dssp TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCT
T ss_pred hhhhhhcccCCcccccCchhhhhccccccccccccccccCCchh
Confidence 8775 677789999777889999999999999999999655543
No 393
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.94 E-value=3.9e-10 Score=110.79 Aligned_cols=186 Identities=19% Similarity=0.164 Sum_probs=120.0
Q ss_pred CCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CCC--ccceeEEEecCC---eeEEEEec
Q 009208 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRN--LLRLCGFCSTEN---ERLLVYPY 379 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--Iv~l~~~~~~~~---~~~lV~e~ 379 (540)
.+.++.|....||+.. ..+++|..... .....+.+|.++++.+. +.. +.+++......+ ..++||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568999999999862 56888886432 23456889999998773 333 334444433332 35789999
Q ss_pred CCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 009208 380 MPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ-------------------------------------- 421 (540)
Q Consensus 380 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------- 421 (540)
++|.++.+... ..++...+..++.++++.+..||+.
T Consensus 98 i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 99988765332 1356677778888888888888851
Q ss_pred -----------------CCCCeEecCCCCCceeeCC--CCCeEEcccccccccCCCCCceeec--------------ccc
Q 009208 422 -----------------CDPKIIHRDVKAANILLDE--DFEAVVGDFGLAKLLDHRDSHVTTA--------------VRG 468 (540)
Q Consensus 422 -----------------~~~~ivH~Dlk~~NILl~~--~~~~kl~Dfgla~~~~~~~~~~~~~--------------~~g 468 (540)
..+.++|+|+++.||++++ +..+.|+||+.+..-+... ..... ...
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHHH
Confidence 1246899999999999998 4567899999886433210 00000 000
Q ss_pred cccccc-ccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 469 TVGHIA-PEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 469 t~~y~a-PE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
..+... |+.... .....+.|+++.++|++.+|+.+|-
T Consensus 251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 001111 222111 1122588999999999999998874
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.88 E-value=1.6e-11 Score=128.02 Aligned_cols=129 Identities=19% Similarity=0.178 Sum_probs=85.0
Q ss_pred CcEEEecCCCCCCcccc-----CccccCCCccCEEEcccCCCCCC----CCcccCCCCcccEEEeeCCCCcccCCccccC
Q 009208 74 GYVSALGLPSQSLSGTL-----SPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFTGEIPDSLGD 144 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~-----~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 144 (540)
.+++.|+|++|.+++.- +..+..+++|++|+|++|.++.. +|..+.++++|++|+|++|++++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 46888888888877532 22334577888888888888743 5666777788888888888876543333332
Q ss_pred -----CCCcchhhccCccCCCC----CCccccCCccccEEecccCcccccCCC----------CCcccccccCCCCC
Q 009208 145 -----LGNLNYLRLNNNSLTGS----CPESLSKIESLTLVDLSYNNLSGSLPK----------ISARTFKVTGNPLI 202 (540)
Q Consensus 145 -----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~----------~~~~~~~~~~n~~~ 202 (540)
.++|++|+|++|.+++. +|..+..+++|+.|++++|++++..+. ...+.+++++|.+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 25788888888887754 455566677888888888877653211 12245667777653
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.87 E-value=2.9e-11 Score=115.28 Aligned_cols=163 Identities=20% Similarity=0.236 Sum_probs=102.2
Q ss_pred HhhccCCCCCchHHHHHHHHHHhc-CCCCCccCCCCC-------------CCCCCccceeeeecCCC-cEEEecCCC---
Q 009208 22 CYATLSPAGINYEVVALVAVKNNL-HDPYNVLENWDI-------------TSVDPCSWRMITCSPDG-YVSALGLPS--- 83 (540)
Q Consensus 22 ~~~~~~~~~~~~~~~~l~~~k~~~-~~~~~~~~~w~~-------------~~~~~c~w~gv~c~~~~-~l~~l~l~~--- 83 (540)
|.....+.+..+|..-|+.+-... ..|.. .-.|.. +....|.|.|+.|+.++ +|..+...+
T Consensus 24 w~kv~I~~g~ky~k~~ll~~i~~~~~~~f~-p~~~~~~~~~~~ffV~~~~~A~~l~~~~g~i~~~~~~ki~~~v~~~~~~ 102 (267)
T 3rw6_A 24 WFKITIPYGRKYDKAWLLSMIQSKCSVPFT-PIEFHYENTRAQFFVEDASTASALKAVNYKILDRENRRISIIINSSAPP 102 (267)
T ss_dssp CEEEEETTGGGSCHHHHHHHHHHTCSSCCC-CEEEEEETTEEEEEESCHHHHHHHHHTTSSCBCTTSCBCCCEEEECCCC
T ss_pred eEEEEecCccccCHHHHHHHHHHhCCCCcE-eEEEEEeCCEEEEEeCChHHHHHHHhcCcEEECCCCCEEEEEEecCCCc
Confidence 445556778888888777665543 33321 111210 11235789999998753 554444433
Q ss_pred CCCccccCc------------------------cccCCCccCE--EEcccCCCCCCCCc----ccCCCCcccEEEeeCCC
Q 009208 84 QSLSGTLSP------------------------WIGNLTKLQS--VLLQNNAILGPIPA----SLGKLEKLQTLDLSNNK 133 (540)
Q Consensus 84 ~~l~~~~~~------------------------~~~~l~~L~~--L~l~~N~l~~~~p~----~~~~l~~L~~L~ls~N~ 133 (540)
..+.+.+++ .+...+.|.. ++++.|+.. .++. ...++++|+.|+||+|+
T Consensus 103 ~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~ 181 (267)
T 3rw6_A 103 HTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNR 181 (267)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSC
T ss_pred ccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCC
Confidence 122222221 1223333444 566666433 2222 22457899999999999
Q ss_pred Ccc--cCCccccCCCCcchhhccCccCCCCCCccccCCc--cccEEecccCcccccCCC
Q 009208 134 FTG--EIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIE--SLTLVDLSYNNLSGSLPK 188 (540)
Q Consensus 134 l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~ 188 (540)
|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|++++.+|+
T Consensus 182 l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 182 LYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp CCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred CCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCc
Confidence 997 5667788899999999999999854 3345555 899999999999987774
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.78 E-value=1.3e-10 Score=121.17 Aligned_cols=129 Identities=20% Similarity=0.166 Sum_probs=101.0
Q ss_pred CcEEEecCCCCCCccc----cCccccCCCccCEEEcccCCCCCCCCcccCC-----CCcccEEEeeCCCCccc----CCc
Q 009208 74 GYVSALGLPSQSLSGT----LSPWIGNLTKLQSVLLQNNAILGPIPASLGK-----LEKLQTLDLSNNKFTGE----IPD 140 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~~----~p~ 140 (540)
.+++.|+|++|.+++. ++..+.++++|++|+|++|.+++..+..+.. .++|++|+|++|++++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5799999999999864 6778888999999999999987544433433 36999999999999865 567
Q ss_pred cccCCCCcchhhccCccCCCCCCccccC-----CccccEEecccCcccc----cCCCC-----CcccccccCCCCC
Q 009208 141 SLGDLGNLNYLRLNNNSLTGSCPESLSK-----IESLTLVDLSYNNLSG----SLPKI-----SARTFKVTGNPLI 202 (540)
Q Consensus 141 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~----~~p~~-----~~~~~~~~~n~~~ 202 (540)
.+..+++|++|+|++|++++..+..+.. .++|+.|++++|++++ .+|.. ..+.+++++|++.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 7888899999999999998654444432 6799999999999985 44432 1266788888774
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.73 E-value=1.7e-10 Score=116.50 Aligned_cols=128 Identities=20% Similarity=0.193 Sum_probs=89.9
Q ss_pred CcEEEecCCCCCCccccCccc-cCCCccCEEEcccCCCCCCCCccc-----CCCCcccEEEeeCCCCcc----cCCcccc
Q 009208 74 GYVSALGLPSQSLSGTLSPWI-GNLTKLQSVLLQNNAILGPIPASL-----GKLEKLQTLDLSNNKFTG----EIPDSLG 143 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~ls~N~l~~----~~p~~~~ 143 (540)
..++.|+|++|.|+..-...+ ..+++|+.|+|++|.|+......+ ...++|++|+|++|+|+. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 478899999998875433333 345678899999998874433333 346789999999998873 3555567
Q ss_pred CCCCcchhhccCccCCCC----CCccccCCccccEEecccCccccc----CCC-----CCcccccccCCCC
Q 009208 144 DLGNLNYLRLNNNSLTGS----CPESLSKIESLTLVDLSYNNLSGS----LPK-----ISARTFKVTGNPL 201 (540)
Q Consensus 144 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~-----~~~~~~~~~~n~~ 201 (540)
.+++|++|+|++|+|++. ++..+...++|+.|+|++|+|+.. ++. -..+.+++++|++
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 788899999999998742 345667778899999999988742 111 1125677888876
No 398
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.72 E-value=1.2e-09 Score=104.00 Aligned_cols=80 Identities=28% Similarity=0.392 Sum_probs=66.7
Q ss_pred cCCCccCEEEcccCCCCC--CCCcccCCCCcccEEEeeCCCCcccCCccccCCC--CcchhhccCccCCCCCCc------
Q 009208 95 GNLTKLQSVLLQNNAILG--PIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLG--NLNYLRLNNNSLTGSCPE------ 164 (540)
Q Consensus 95 ~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 164 (540)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 568999999999999997 4567778999999999999999954 4455555 999999999999987763
Q ss_pred -cccCCccccEEe
Q 009208 165 -SLSKIESLTLVD 176 (540)
Q Consensus 165 -~~~~l~~L~~L~ 176 (540)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367788888876
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.71 E-value=6.7e-10 Score=112.14 Aligned_cols=111 Identities=20% Similarity=0.235 Sum_probs=89.3
Q ss_pred cEEEecCCCCCCccccCccc-----cCCCccCEEEcccCCCCC----CCCcccCCCCcccEEEeeCCCCcc----cCCcc
Q 009208 75 YVSALGLPSQSLSGTLSPWI-----GNLTKLQSVLLQNNAILG----PIPASLGKLEKLQTLDLSNNKFTG----EIPDS 141 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~-----~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~----~~p~~ 141 (540)
+++.|+|++|.|+..-...+ ...++|++|+|++|.|+. .++..+..+++|++|+|++|+|+. .++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 69999999999986444444 356899999999999974 244556788999999999999984 24566
Q ss_pred ccCCCCcchhhccCccCCCC----CCccccCCccccEEecccCccccc
Q 009208 142 LGDLGNLNYLRLNNNSLTGS----CPESLSKIESLTLVDLSYNNLSGS 185 (540)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~ 185 (540)
+...++|++|+|++|.|++. ++..+...++|+.|+|++|+|+..
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 78889999999999999852 344556678999999999999853
No 400
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=2.1e-07 Score=91.84 Aligned_cols=136 Identities=18% Similarity=0.173 Sum_probs=98.7
Q ss_pred CCCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccC--C--CccceeEEEecCCeeEEEE
Q 009208 302 NFSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH--R--NLLRLCGFCSTENERLLVY 377 (540)
Q Consensus 302 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~--nIv~l~~~~~~~~~~~lV~ 377 (540)
.+...+.++.|....||+. |..+++|..... .....+.+|.+++..+.+ . .+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~---~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD---SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH---HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH---HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 5556678999999999997 667888876432 223458899998888865 1 23344444 5678999
Q ss_pred ecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 009208 378 PYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC----------------------------------- 422 (540)
Q Consensus 378 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~----------------------------------- 422 (540)
||++|.++..... ..++......++.++++.+..||+..
T Consensus 107 e~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 9999988764321 13456666777778888888777432
Q ss_pred -------------------------CCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 423 -------------------------DPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 423 -------------------------~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
.+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 13459999999999999866679999998864
No 401
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=7.1e-08 Score=95.63 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=66.4
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCccc-EEEeeCCCCcccCCccccCCCCcchhhc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQ-TLDLSNNKFTGEIPDSLGDLGNLNYLRL 153 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~L~~L~l 153 (540)
.++.|+|++|+++..-+..|.++++|+.|+|.+| ++..-+..|.++++|+ .|+|++ +++..-+..|.++++|+.|++
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l 304 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLA 304 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEe
Confidence 5677777777776444456777777777777776 5545555677777777 777776 565344456777777777777
Q ss_pred cCccCCCCCCccccCCccccEEe
Q 009208 154 NNNSLTGSCPESLSKIESLTLVD 176 (540)
Q Consensus 154 ~~N~l~~~~p~~~~~l~~L~~L~ 176 (540)
++|+++..-+..|.++++|+.++
T Consensus 305 ~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 305 TGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCccCccchhhhcCCcchhhhc
Confidence 77777644455677777777665
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.52 E-value=4.3e-09 Score=95.24 Aligned_cols=110 Identities=15% Similarity=0.194 Sum_probs=86.2
Q ss_pred CcEEEecCCCC-CCcc----ccCccccCCCccCEEEcccCCCCCC----CCcccCCCCcccEEEeeCCCCccc----CCc
Q 009208 74 GYVSALGLPSQ-SLSG----TLSPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFTGE----IPD 140 (540)
Q Consensus 74 ~~l~~l~l~~~-~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~----~p~ 140 (540)
..++.|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|+|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 47999999999 8874 2556677789999999999998742 334455668899999999999843 556
Q ss_pred cccCCCCcchhhc--cCccCCCC----CCccccCCccccEEecccCccc
Q 009208 141 SLGDLGNLNYLRL--NNNSLTGS----CPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 141 ~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
.+...++|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6778889999999 88999743 3345566688999999999886
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.51 E-value=5.6e-07 Score=87.23 Aligned_cols=142 Identities=21% Similarity=0.200 Sum_probs=93.6
Q ss_pred cCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCC---CccceeEEEecCCeeEEEEecCC
Q 009208 305 AKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR---NLLRLCGFCSTENERLLVYPYMP 381 (540)
Q Consensus 305 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lV~e~~~ 381 (540)
..+.++.|.++.||++...+|+.++||+..... ......|.+|.+.++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 346799999999999998889999999965432 22335789999999999865 466777653 4689999999
Q ss_pred CCChhh-----------hccccCCC-----------------CCCCCHHHHHH--------------------HHHHHHH
Q 009208 382 NGSVAS-----------RLRDHIHG-----------------RPALDWARRKR--------------------IALGTAR 413 (540)
Q Consensus 382 ~gsL~~-----------~l~~~~~~-----------------~~~l~~~~~~~--------------------i~~~ia~ 413 (540)
++++.. .||..... ...-+|..... ....+-+
T Consensus 94 g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~ 173 (288)
T 3d1u_A 94 ERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEK 173 (288)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 987532 12322111 00123443211 0111112
Q ss_pred HHHHHH----hcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 414 GLLYLH----EQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 414 ~l~~LH----~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
.+..+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 174 l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 174 VLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 222232 2235689999999999999984 5889999 654
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=3.8e-07 Score=90.38 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=83.3
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccC-----------------------------------
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLG----------------------------------- 119 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~----------------------------------- 119 (540)
.++.|+|++ +++..-+.+|.++++|+.|+|++|.++...+..|.
T Consensus 102 ~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~ 180 (329)
T 3sb4_A 102 TLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLET 180 (329)
T ss_dssp TCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEE
T ss_pred CCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccce
Confidence 688888888 78765567788888888888888875321111110
Q ss_pred -------------------------------------------CCCcccEEEeeCCCCcccCCccccCCCCcchhhccCc
Q 009208 120 -------------------------------------------KLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNN 156 (540)
Q Consensus 120 -------------------------------------------~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N 156 (540)
.+++|+.|+|++|+++..-+..|.++++|+.|+|.+|
T Consensus 181 ~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n 260 (329)
T 3sb4_A 181 TIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN 260 (329)
T ss_dssp EEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT
T ss_pred eEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc
Confidence 1568888888888888433445888888888888887
Q ss_pred cCCCCCCccccCCcccc-EEecccCcccccCCCCCc-----ccccccCCCC
Q 009208 157 SLTGSCPESLSKIESLT-LVDLSYNNLSGSLPKISA-----RTFKVTGNPL 201 (540)
Q Consensus 157 ~l~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~-----~~~~~~~n~~ 201 (540)
++..-+.+|.++++|+ .+++.+ +++..-+..+. +.+.+.+|.+
T Consensus 261 -i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i 309 (329)
T 3sb4_A 261 -LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKI 309 (329)
T ss_dssp -CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCC
T ss_pred -cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCcc
Confidence 6645566788888888 888887 56533223222 3345555554
No 405
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.33 E-value=3.1e-06 Score=82.79 Aligned_cols=136 Identities=18% Similarity=0.181 Sum_probs=92.0
Q ss_pred CCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCC---CccceeEEEe-cCCeeEEEEecCC
Q 009208 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR---NLLRLCGFCS-TENERLLVYPYMP 381 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~~lV~e~~~ 381 (540)
.+.++.|....||+. |..+++|+... ......+.+|.+++..+.+. .+.+++.++. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 356788888899987 56788888532 22345788999999988653 2456666664 4556789999999
Q ss_pred CCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 009208 382 NGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQ---------------------------------------- 421 (540)
Q Consensus 382 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~---------------------------------------- 421 (540)
|.++.+.... .++......++.++++.|..||+.
T Consensus 97 G~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (306)
T 3tdw_A 97 GQILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD 170 (306)
T ss_dssp SEECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred CeECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence 9887653211 123334444444555555444432
Q ss_pred -----------------CCCCeEecCCCCCceeeCC---CCCe-EEcccccccc
Q 009208 422 -----------------CDPKIIHRDVKAANILLDE---DFEA-VVGDFGLAKL 454 (540)
Q Consensus 422 -----------------~~~~ivH~Dlk~~NILl~~---~~~~-kl~Dfgla~~ 454 (540)
..+.++|+|+++.||+++. ++.+ .|+||+.+..
T Consensus 171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999997 4554 7999998864
No 406
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.29 E-value=3.4e-06 Score=84.61 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=90.4
Q ss_pred cCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCC--ccceeEEEecC-CeeEEEEecCC
Q 009208 305 AKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRLCGFCSTE-NERLLVYPYMP 381 (540)
Q Consensus 305 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~-~~~~lV~e~~~ 381 (540)
..+.++.|....+|+... +|..+++|..... ..+..|..++..+.... +.+++.++... +..++||||++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 346788999999999886 6888999987432 25788888888876433 45667776654 66899999999
Q ss_pred CCChhhh------------------ccccCCCC---------C----CCCHHHH---------------------HHHHH
Q 009208 382 NGSVASR------------------LRDHIHGR---------P----ALDWARR---------------------KRIAL 409 (540)
Q Consensus 382 ~gsL~~~------------------l~~~~~~~---------~----~l~~~~~---------------------~~i~~ 409 (540)
|.++.+. |+...... . .-.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8765421 11110000 0 0011111 01112
Q ss_pred HHHHHHHHHHhc-CCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 410 GTARGLLYLHEQ-CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 410 ~ia~~l~~LH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
.+....+++... ..+.++|+|+++.||+++++..+.|+||+.+..
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 222222333221 125789999999999998777788999998864
No 407
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.28 E-value=4e-06 Score=80.30 Aligned_cols=135 Identities=19% Similarity=0.137 Sum_probs=95.0
Q ss_pred eeeeccCc-cEEEEEeC-CCcEEEEEEeccCCccccHHHHHHHHHHHhccc-CCCccceeEEEecCCeeEEEEecCCCCC
Q 009208 308 ILGRGGFG-IVYKGCFS-DGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-HRNLLRLCGFCSTENERLLVYPYMPNGS 384 (540)
Q Consensus 308 ~lG~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lV~e~~~~gs 384 (540)
.+..|..| .||+.... ++..+.+|+.... ....+.+|...++.+. +--+.++++++...+..++|||++++.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556666 58988765 4567889986532 2346788999887764 3335678888888899999999999987
Q ss_pred hhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 009208 385 VASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQC------------------------------------------ 422 (540)
Q Consensus 385 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------ 422 (540)
+.+..... ......+..++++.|..||...
T Consensus 107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 76654321 1123345566666666666421
Q ss_pred -------------CCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 423 -------------DPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 423 -------------~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
.+.++|+|+++.||++++++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12489999999999999877777999998863
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.21 E-value=2.5e-06 Score=85.40 Aligned_cols=81 Identities=9% Similarity=-0.048 Sum_probs=54.4
Q ss_pred Cee-eeccCccEEEEEeC-------CCcEEEEEEeccCCc--cccHHHHHHHHHHHhcccC---CCccceeEEEecC---
Q 009208 307 NIL-GRGGFGIVYKGCFS-------DGALVAVKRLKDYNI--AGGEVQFQTEVETISLAVH---RNLLRLCGFCSTE--- 370 (540)
Q Consensus 307 ~~l-G~G~~g~Vy~~~~~-------~g~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~--- 370 (540)
+.| +.|....+|+.... ++..+++|....... ......+.+|.++++.+.. -.+.+++.++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 556 78888999998764 267888998654320 0011346778888877642 3466777777654
Q ss_pred CeeEEEEecCCCCChhh
Q 009208 371 NERLLVYPYMPNGSVAS 387 (540)
Q Consensus 371 ~~~~lV~e~~~~gsL~~ 387 (540)
+..++||||++|.++.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35789999999877654
No 409
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.18 E-value=1.9e-07 Score=100.31 Aligned_cols=103 Identities=11% Similarity=0.131 Sum_probs=61.6
Q ss_pred EEEecCCCCC-Ccc-ccCccccCCCccCEEEcccCCCCCC----CCcccCCCCcccEEEeeCCCCc----ccCCccccCC
Q 009208 76 VSALGLPSQS-LSG-TLSPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFT----GEIPDSLGDL 145 (540)
Q Consensus 76 l~~l~l~~~~-l~~-~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l 145 (540)
++.|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|++|+|++|+++ +.++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7777777665 111 1222233567777777777776654 2333455667777777777775 2344445566
Q ss_pred CCcchhhccCccCCCCCCccccCCccccEEeccc
Q 009208 146 GNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSY 179 (540)
Q Consensus 146 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 179 (540)
++|+.|+|++|.+.+ +|..+..+++|+.|+++.
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 777777777777663 555566666666666654
No 410
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.11 E-value=6.7e-07 Score=95.92 Aligned_cols=106 Identities=14% Similarity=0.070 Sum_probs=75.5
Q ss_pred CcEEEecCCCCCCccc----cCccccCCCccCEEEcccCCCCC----CCCcccCCCCcccEEEeeCCCCcccCCccccCC
Q 009208 74 GYVSALGLPSQSLSGT----LSPWIGNLTKLQSVLLQNNAILG----PIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDL 145 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~----~~~~~~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 145 (540)
.+++.|+|++|.+++. ++..+.++++|++|+|++|.+++ .++..+.++++|+.|+|++|.+. .+|..+.++
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHhhh
Confidence 4789999999988765 44456678899999999999873 33445567889999999999888 477778888
Q ss_pred CCcchhhccCccCC---CCCCccccCCccccEEecccC
Q 009208 146 GNLNYLRLNNNSLT---GSCPESLSKIESLTLVDLSYN 180 (540)
Q Consensus 146 ~~L~~L~l~~N~l~---~~~p~~~~~l~~L~~L~l~~N 180 (540)
++|++|+++++... +..+..+..+++|+.|+++++
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 280 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM 280 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCcccc
Confidence 88888888753322 223344555566666666554
No 411
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.11 E-value=1.6e-05 Score=78.68 Aligned_cols=141 Identities=17% Similarity=0.214 Sum_probs=79.6
Q ss_pred CeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhccc-----CCCcccee-E--EEecCCeeEEEEe
Q 009208 307 NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV-----HRNLLRLC-G--FCSTENERLLVYP 378 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv~l~-~--~~~~~~~~~lV~e 378 (540)
+.++.|..+.||+....+| .+++|+.... ..+...|.+++..+. .|.++... | +....+..+++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3456677899999987555 5889988652 123334455444432 23333311 1 1234667899999
Q ss_pred cCCCCChh--------------hhccccCCCC----------CCCCHHHHH-----------------------------
Q 009208 379 YMPNGSVA--------------SRLRDHIHGR----------PALDWARRK----------------------------- 405 (540)
Q Consensus 379 ~~~~gsL~--------------~~l~~~~~~~----------~~l~~~~~~----------------------------- 405 (540)
|++|.++. ..+|...... ..-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99987653 0122111100 012332211
Q ss_pred --HHHHHHHHHHHHHHh----------cCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 406 --RIALGTARGLLYLHE----------QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 406 --~i~~~ia~~l~~LH~----------~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
.+...+.+++.+|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111223445666653 124589999999999999888899999999875
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.08 E-value=1.9e-07 Score=84.28 Aligned_cols=96 Identities=22% Similarity=0.237 Sum_probs=77.3
Q ss_pred ccCccccCCCccCEEEcccC-CCCCC----CCcccCCCCcccEEEeeCCCCcc----cCCccccCCCCcchhhccCccCC
Q 009208 89 TLSPWIGNLTKLQSVLLQNN-AILGP----IPASLGKLEKLQTLDLSNNKFTG----EIPDSLGDLGNLNYLRLNNNSLT 159 (540)
Q Consensus 89 ~~~~~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~ 159 (540)
.+...+...++|++|+|++| .|... +...+...++|++|+|++|+|.. .+...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 45566778899999999999 88742 34456778999999999999973 24455667789999999999998
Q ss_pred CC----CCccccCCccccEEec--ccCcccc
Q 009208 160 GS----CPESLSKIESLTLVDL--SYNNLSG 184 (540)
Q Consensus 160 ~~----~p~~~~~l~~L~~L~l--~~N~l~~ 184 (540)
.. +...+...++|+.|+| ++|.|+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 53 4567788889999999 8899984
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.01 E-value=4.5e-07 Score=90.73 Aligned_cols=107 Identities=15% Similarity=0.208 Sum_probs=70.1
Q ss_pred CcEEEecCCCCC-CccccCccccCCCccCEEEcccCCCCCCCCcccC--CCCcccEEEeeC--CCCccc-----CCccc-
Q 009208 74 GYVSALGLPSQS-LSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLG--KLEKLQTLDLSN--NKFTGE-----IPDSL- 142 (540)
Q Consensus 74 ~~l~~l~l~~~~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~ls~--N~l~~~-----~p~~~- 142 (540)
.+++.|+|++|. + .+++ +. +++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l--~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL--SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp TTCCEEEEECCBTC--BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCcEEEEeCCCCc--eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 479999998873 3 2333 43 78899999988877633222333 688899998863 222111 11222
Q ss_pred -cCCCCcchhhccCccCCCCCCcccc---CCccccEEecccCcccc
Q 009208 143 -GDLGNLNYLRLNNNSLTGSCPESLS---KIESLTLVDLSYNNLSG 184 (540)
Q Consensus 143 -~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~ 184 (540)
..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|++
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 2478899999998888743333332 47889999999998875
No 414
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.01 E-value=1.8e-07 Score=100.52 Aligned_cols=127 Identities=12% Similarity=0.092 Sum_probs=84.5
Q ss_pred CcEEEecCCCCCCccccCcccc-CCCccCEEEcc--c----CCCCCCC-----CcccCCCCcccEEEeeCCCCcccCCcc
Q 009208 74 GYVSALGLPSQSLSGTLSPWIG-NLTKLQSVLLQ--N----NAILGPI-----PASLGKLEKLQTLDLSNNKFTGEIPDS 141 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~-~l~~L~~L~l~--~----N~l~~~~-----p~~~~~l~~L~~L~ls~N~l~~~~p~~ 141 (540)
.+++.|++..|++++.....+. ++++|+.|+|+ + |.++... +..+.++++|+.|+|++ ++++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 3678888888888876666665 58888898888 3 5565221 11256678888888876 666555555
Q ss_pred ccC-CCCcchhhccCccCCCCCCccc-cCCccccEEecccCcccccCCC-C-----CcccccccCCCC
Q 009208 142 LGD-LGNLNYLRLNNNSLTGSCPESL-SKIESLTLVDLSYNNLSGSLPK-I-----SARTFKVTGNPL 201 (540)
Q Consensus 142 ~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~-~-----~~~~~~~~~n~~ 201 (540)
+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|++++..+. + ..+.+++++|+.
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 555 7888888888888865444444 5678888888888888643221 1 114566777654
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=1.7e-07 Score=100.67 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=87.9
Q ss_pred CcEEEecC---------CCCCCccccCcccc-CCCccCEEEcccCCCCCCCCcccC-CCCcccEEEee--C----CCCcc
Q 009208 74 GYVSALGL---------PSQSLSGTLSPWIG-NLTKLQSVLLQNNAILGPIPASLG-KLEKLQTLDLS--N----NKFTG 136 (540)
Q Consensus 74 ~~l~~l~l---------~~~~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~ls--~----N~l~~ 136 (540)
.+++.|+| +.+.+++.....+. ++++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |+++
T Consensus 338 ~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~- 416 (594)
T 2p1m_B 338 KDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT- 416 (594)
T ss_dssp TTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT-
T ss_pred CCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc-
Confidence 46888888 44566644333333 488999999999999865555554 58899999999 4 6666
Q ss_pred cCC------ccccCCCCcchhhccCccCCCCCCccccC-CccccEEecccCcccccCCC-C-----CcccccccCCCC
Q 009208 137 EIP------DSLGDLGNLNYLRLNNNSLTGSCPESLSK-IESLTLVDLSYNNLSGSLPK-I-----SARTFKVTGNPL 201 (540)
Q Consensus 137 ~~p------~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~~N~l~~~~p~-~-----~~~~~~~~~n~~ 201 (540)
..| ..+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+. + ..+.+++++|++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 222 2366789999999977 666554455555 88999999999998753221 1 126678888886
No 416
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.95 E-value=3e-05 Score=78.68 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=48.8
Q ss_pred CCeeeeccCccEEEEEeC-CCcEEEEEEeccCCc------cccHHHHHHHHHHHhcccC--CCcc-ceeEEEecCCeeEE
Q 009208 306 KNILGRGGFGIVYKGCFS-DGALVAVKRLKDYNI------AGGEVQFQTEVETISLAVH--RNLL-RLCGFCSTENERLL 375 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~nIv-~l~~~~~~~~~~~l 375 (540)
.+.+|.|..+.||++... +++.++||....... .....++..|.+++..+.. +..+ +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999764 468899998653221 1122356778888877642 3333 44443 3455789
Q ss_pred EEecCCCC
Q 009208 376 VYPYMPNG 383 (540)
Q Consensus 376 V~e~~~~g 383 (540)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.84 E-value=0.00013 Score=71.13 Aligned_cols=139 Identities=17% Similarity=0.150 Sum_probs=92.6
Q ss_pred CCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhccc---CCCccceeEEEecCCeeEEEEecCCC
Q 009208 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAV---HRNLLRLCGFCSTENERLLVYPYMPN 382 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lV~e~~~~ 382 (540)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...+.+++.++...+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 45789999999999887 5678889986542 2456888988888774 35677888888888889999999999
Q ss_pred CChhh-----------hccccCC-C-----------------CCCCCHHHHH---HHHH----------------HHHHH
Q 009208 383 GSVAS-----------RLRDHIH-G-----------------RPALDWARRK---RIAL----------------GTARG 414 (540)
Q Consensus 383 gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~ia~~ 414 (540)
..+.. .||.... . .-.-+|.... ++.. .+.+.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 86532 1232211 0 0012465432 1111 11111
Q ss_pred -HHHHHh-cCCCCeEecCCCCCceeeCCCCCeEEcccc
Q 009208 415 -LLYLHE-QCDPKIIHRDVKAANILLDEDFEAVVGDFG 450 (540)
Q Consensus 415 -l~~LH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfg 450 (540)
...|.. ...+.++|+|+.+.|++++.++ +.|+|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 123321 2357899999999999999887 8999984
No 418
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.76 E-value=3.2e-05 Score=78.52 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=75.8
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCc-----ccCCccccCCCCcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFT-----GEIPDSLGDLGNLN 149 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-----~~~p~~~~~l~~L~ 149 (540)
.++.|+|+++ ++..-..+|.+ .+|+.+.| .|.++..-+..|.++++|+.+++.+|.+. ..-+..|.++++|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 5777888764 55444566766 78888888 45566555678888889999998888765 23445688888888
Q ss_pred hhhccCccCCCCCCccccCCccccEEecccCccc
Q 009208 150 YLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 150 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
.++|.+ .++..-..+|.++++|+.+.+..| ++
T Consensus 304 ~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~ 335 (401)
T 4fdw_A 304 RFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VT 335 (401)
T ss_dssp EECCCT-TCCEECTTTTTTCCSCCEEEECTT-CC
T ss_pred eEEeCC-ceEEEhhhhhcCCCCccEEEECcc-cc
Confidence 888884 466445567888888888888655 44
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.75 E-value=4.1e-06 Score=73.96 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=38.2
Q ss_pred ccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCC-CcccCCccccCC----CCcchhhccCcc-CCCCCCccccCCccc
Q 009208 99 KLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNK-FTGEIPDSLGDL----GNLNYLRLNNNS-LTGSCPESLSKIESL 172 (540)
Q Consensus 99 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~L 172 (540)
+|+.|||+++.|+..--..+.++++|++|+|++|. |+..--..+..+ ++|++|+|+++. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555443322334455555555555553 442211223332 245555555543 443222234455666
Q ss_pred cEEecccC
Q 009208 173 TLVDLSYN 180 (540)
Q Consensus 173 ~~L~l~~N 180 (540)
+.|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666655
No 420
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.65 E-value=0.00023 Score=72.77 Aligned_cols=79 Identities=13% Similarity=0.073 Sum_probs=46.7
Q ss_pred CCCeEecCCCCCceeeCCCCCeEEcccccccccCCCCCceeecc-ccccccccccccccC---CCCccCCeehhhHHHHH
Q 009208 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAV-RGTVGHIAPEYLSTG---QSSEKTDVFGFGILLLE 498 (540)
Q Consensus 423 ~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~~~k~Dv~S~Gvil~e 498 (540)
.+.++|||+++.||+++.++ ++++||+.+..-... ....... .-...|++|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 45899999999999999776 999999988642211 0000000 012346666654311 11223445567777777
Q ss_pred HHhCC
Q 009208 499 LITGQ 503 (540)
Q Consensus 499 lltg~ 503 (540)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76654
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00011 Score=70.82 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=54.8
Q ss_pred CCcCCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCC---CccceeEEEecCCeeEEEEec
Q 009208 303 FSAKNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHR---NLLRLCGFCSTENERLLVYPY 379 (540)
Q Consensus 303 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lV~e~ 379 (540)
....+.+|.|..+.||+.++.+|+.|.+|+..... ......|..|.+.|+.+.-. -+.+++++ +..++||||
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~ 91 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEW 91 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEe
Confidence 44457789999999999999999999999865432 22233578899888877422 23344443 234789999
Q ss_pred CCCCCh
Q 009208 380 MPNGSV 385 (540)
Q Consensus 380 ~~~gsL 385 (540)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987754
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.55 E-value=1.3e-05 Score=70.83 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=66.4
Q ss_pred CcEEEecCCCCCCccccCccccCCCccCEEEcccCC-CCCCCCcccCCC----CcccEEEeeCCC-CcccCCccccCCCC
Q 009208 74 GYVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNA-ILGPIPASLGKL----EKLQTLDLSNNK-FTGEIPDSLGDLGN 147 (540)
Q Consensus 74 ~~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~~~~p~~~~~l~~ 147 (540)
-+++.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|++|. |+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 379999999999886545667899999999999985 664322345554 479999999985 87433345778999
Q ss_pred cchhhccCcc-CC
Q 009208 148 LNYLRLNNNS-LT 159 (540)
Q Consensus 148 L~~L~l~~N~-l~ 159 (540)
|++|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999975 44
No 423
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.53 E-value=1.3e-05 Score=80.03 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=81.4
Q ss_pred CcEEEecCCCCCCc---------cccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCcccc-
Q 009208 74 GYVSALGLPSQSLS---------GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLG- 143 (540)
Q Consensus 74 ~~l~~l~l~~~~l~---------~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~- 143 (540)
.+++.|.+.++... +.++..+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..|.++......+.
T Consensus 139 ~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~ 215 (362)
T 2ra8_A 139 AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILG 215 (362)
T ss_dssp TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHH
T ss_pred chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHH
Confidence 47888888655331 234455677899999999988312 2343 4 389999999999988744334444
Q ss_pred -CCCCcchhhccC--ccCCCC-----CCccc--cCCccccEEecccCcccccCC-------CC-CcccccccCCCC
Q 009208 144 -DLGNLNYLRLNN--NSLTGS-----CPESL--SKIESLTLVDLSYNNLSGSLP-------KI-SARTFKVTGNPL 201 (540)
Q Consensus 144 -~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~p-------~~-~~~~~~~~~n~~ 201 (540)
.+++|+.|+|+. |...+. +...+ ..+++|++|+|++|.+++..+ .. ..+.++++.|.+
T Consensus 216 ~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 216 SDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp SBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred ccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 789999999863 332221 11122 257899999999999874321 11 125677777765
No 424
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.46 E-value=0.00035 Score=67.84 Aligned_cols=71 Identities=8% Similarity=0.022 Sum_probs=43.8
Q ss_pred CCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCcc-ceeEEEecCCeeEEEEecC-CCC
Q 009208 306 KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLL-RLCGFCSTENERLLVYPYM-PNG 383 (540)
Q Consensus 306 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~lV~e~~-~~g 383 (540)
.+.++.|....+|+. ..+++|+........ ....+|..+++.+....+. +++++ ..+..++|+||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~--~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY--INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C--CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce--eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 577889999999998 568888876432110 1234677777666433333 44443 344457899999 554
Q ss_pred Ch
Q 009208 384 SV 385 (540)
Q Consensus 384 sL 385 (540)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 425
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.41 E-value=0.00017 Score=73.21 Aligned_cols=106 Identities=13% Similarity=0.076 Sum_probs=86.6
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCC-----CCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAIL-----GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLN 149 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 149 (540)
.++.+.| .++++..-+..|.++++|+.+++.+|.+. ...+..|.++++|+.++|. |+++..-...|.++++|+
T Consensus 249 ~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 249 GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVT 326 (401)
T ss_dssp CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCC
T ss_pred CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCcc
Confidence 5788888 45577566789999999999999998875 3456789999999999999 558844456799999999
Q ss_pred hhhccCccCCCCCCccccCCccccEEecccCcccc
Q 009208 150 YLRLNNNSLTGSCPESLSKIESLTLVDLSYNNLSG 184 (540)
Q Consensus 150 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 184 (540)
.++|.+| ++..-+.+|.++ +|+.|++++|.+..
T Consensus 327 ~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 327 QLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp EEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred EEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 9999665 664556789999 99999999997763
No 426
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.30 E-value=0.0022 Score=62.89 Aligned_cols=159 Identities=16% Similarity=0.105 Sum_probs=89.0
Q ss_pred cCHHHHHHHhcCCCc-----CCeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCC--ccce
Q 009208 291 YTFKELRAATSNFSA-----KNILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRL 363 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l 363 (540)
.+.+++....+.|.. ...++ |....||+....+|+.+++|...... .....+..|..++..+.... +.++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecce
Confidence 344444444444432 23466 88889999887778789999986432 12345667777777664222 3344
Q ss_pred eEE-----EecCCeeEEEEecCCCCChhh----h----------ccccCC-----CCCCCCHHHH----HHH--------
Q 009208 364 CGF-----CSTENERLLVYPYMPNGSVAS----R----------LRDHIH-----GRPALDWARR----KRI-------- 407 (540)
Q Consensus 364 ~~~-----~~~~~~~~lV~e~~~~gsL~~----~----------l~~~~~-----~~~~l~~~~~----~~i-------- 407 (540)
+.. ....+..+++++|++|.++.. . +|.... .....++... ..+
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 432 122456678999998865421 0 111110 1112333221 001
Q ss_pred -------HHHHHHHHHHHHhc----CCCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 408 -------ALGTARGLLYLHEQ----CDPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 408 -------~~~ia~~l~~LH~~----~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
...+.+.++.+... ....++|||+++.||+++ + .+.|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234689999999999999 4 899999987753
No 427
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.26 E-value=0.002 Score=62.99 Aligned_cols=159 Identities=11% Similarity=0.041 Sum_probs=87.4
Q ss_pred cCHHHHHHHhcCCCcC-----CeeeeccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCC--ccce
Q 009208 291 YTFKELRAATSNFSAK-----NILGRGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRN--LLRL 363 (540)
Q Consensus 291 ~~~~~l~~~~~~~~~~-----~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l 363 (540)
++.+++......|... +.++.|....+|+....+| .+++|...... ...++..|.+++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4455555555556542 3456688889999987655 67889876521 1123556676666553222 2233
Q ss_pred eEE------EecCCeeEEEEecCCCCChhhh--------------ccccCCC---C-----CCCCHHHHHH---------
Q 009208 364 CGF------CSTENERLLVYPYMPNGSVASR--------------LRDHIHG---R-----PALDWARRKR--------- 406 (540)
Q Consensus 364 ~~~------~~~~~~~~lV~e~~~~gsL~~~--------------l~~~~~~---~-----~~l~~~~~~~--------- 406 (540)
+.. ....+..+++++|++|..+... +|..... . ....|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 1224567899999998654320 2211110 0 0012332111
Q ss_pred ---HHHHHHHHHHHHHhc----CCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 407 ---IALGTARGLLYLHEQ----CDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 407 ---i~~~ia~~l~~LH~~----~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
+...+.+.+++++.. ....++|+|+++.||+++++..+.|+||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455566532 23479999999999999987556899998775
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.22 E-value=2e-05 Score=70.87 Aligned_cols=109 Identities=18% Similarity=0.195 Sum_probs=58.1
Q ss_pred CcEEEecCCCC-CCcc----ccCccccCCCccCEEEcccCCCCCC----CCcccCCCCcccEEEeeCCCCccc----CCc
Q 009208 74 GYVSALGLPSQ-SLSG----TLSPWIGNLTKLQSVLLQNNAILGP----IPASLGKLEKLQTLDLSNNKFTGE----IPD 140 (540)
Q Consensus 74 ~~l~~l~l~~~-~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~----~p~ 140 (540)
..++.|+|++| .|.. .+-..+..-++|+.|+|++|+|... +-+.+..-+.|+.|+|++|+|+.. +-+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 35667777764 5542 2334455556677777777776631 222333456677777777776521 223
Q ss_pred cccCCCCcchhhccCcc---CCC----CCCccccCCccccEEecccCcc
Q 009208 141 SLGDLGNLNYLRLNNNS---LTG----SCPESLSKIESLTLVDLSYNNL 182 (540)
Q Consensus 141 ~~~~l~~L~~L~l~~N~---l~~----~~p~~~~~l~~L~~L~l~~N~l 182 (540)
.+..-+.|++|+|++|. +.. .+...+..-++|+.|+++.|.+
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34444566666666542 221 1223344445666666665543
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.15 E-value=0.00042 Score=58.09 Aligned_cols=56 Identities=20% Similarity=0.274 Sum_probs=30.6
Q ss_pred EecCCCCCCc-cccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCc
Q 009208 78 ALGLPSQSLS-GTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFT 135 (540)
Q Consensus 78 ~l~l~~~~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 135 (540)
.++.++++|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555566664 23443321 24666666666666444445555666666666666543
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.13 E-value=0.00044 Score=57.98 Aligned_cols=55 Identities=22% Similarity=0.245 Sum_probs=25.9
Q ss_pred EEEcccCCCC-CCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccC
Q 009208 102 SVLLQNNAIL-GPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSL 158 (540)
Q Consensus 102 ~L~l~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l 158 (540)
.++.+++.++ ..+|..+. ++|++|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5566666654 23443322 2455556666655522222344444444444444443
No 431
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.11 E-value=0.0019 Score=66.07 Aligned_cols=72 Identities=18% Similarity=0.230 Sum_probs=48.8
Q ss_pred CeeeeccCccEEEEEeCC--------CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCc-cceeEEEecCCeeEEEE
Q 009208 307 NILGRGGFGIVYKGCFSD--------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVY 377 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~ 377 (540)
+.|+.|....||+....+ +..+++|+.... .....+.+|..++..+...++ .++++.+. + .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 567788889999998753 578999987432 111355678888887754444 45666543 2 3899
Q ss_pred ecCCCCCh
Q 009208 378 PYMPNGSV 385 (540)
Q Consensus 378 e~~~~gsL 385 (540)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987544
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.09 E-value=0.0014 Score=64.50 Aligned_cols=142 Identities=15% Similarity=0.038 Sum_probs=71.7
Q ss_pred CeeeeccCcc-EEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccC--CCccceeEEEecCCeeEEEEecCCCC
Q 009208 307 NILGRGGFGI-VYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVH--RNLLRLCGFCSTENERLLVYPYMPNG 383 (540)
Q Consensus 307 ~~lG~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lV~e~~~~g 383 (540)
+.++.|+... +|+....+|..+++|....... ..+..|++++..+.. -.+.+++.+....+ +++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 3455555444 6677654477777776543211 123445565555532 23445666543333 7899999776
Q ss_pred Chhhhccc---------------------cCC-CCCCCCHHHHH--------------------HHHHHHHHHHHHHHh-
Q 009208 384 SVASRLRD---------------------HIH-GRPALDWARRK--------------------RIALGTARGLLYLHE- 420 (540)
Q Consensus 384 sL~~~l~~---------------------~~~-~~~~l~~~~~~--------------------~i~~~ia~~l~~LH~- 420 (540)
.+.+++.. ... ..+.++..... .....+.+.+..+..
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 66443321 000 01112221110 000111222233311
Q ss_pred --cCCCCeEecCCCCCceeeCCC----CCeEEcccccccc
Q 009208 421 --QCDPKIIHRDVKAANILLDED----FEAVVGDFGLAKL 454 (540)
Q Consensus 421 --~~~~~ivH~Dlk~~NILl~~~----~~~kl~Dfgla~~ 454 (540)
...+.++|||+++.||+++.+ ..+.|+||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 124589999999999999874 6789999998864
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.87 E-value=0.0041 Score=62.23 Aligned_cols=141 Identities=14% Similarity=0.175 Sum_probs=82.8
Q ss_pred CeeeeccCccEEEEEeC--------CCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCc-cceeEEEecCCeeEEEE
Q 009208 307 NILGRGGFGIVYKGCFS--------DGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVY 377 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~ 377 (540)
+.+..|-...+|+.... +++.+.+|+.... ........+|.++++.+....+ .++++++.+ .+|+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45667888899998874 2478999986331 2234456789998887753333 455665543 2999
Q ss_pred ecCCCCChhhh-----------------cccc-CCCCCCC--CHHHHHHHHHHHHH-------------------HHHHH
Q 009208 378 PYMPNGSVASR-----------------LRDH-IHGRPAL--DWARRKRIALGTAR-------------------GLLYL 418 (540)
Q Consensus 378 e~~~~gsL~~~-----------------l~~~-~~~~~~l--~~~~~~~i~~~ia~-------------------~l~~L 418 (540)
||++|.++..- ||.. ....... -|.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665421 1111 1111122 24555555444322 23333
Q ss_pred H----h-cCCCCeEecCCCCCceeeCCC----CCeEEccccccc
Q 009208 419 H----E-QCDPKIIHRDVKAANILLDED----FEAVVGDFGLAK 453 (540)
Q Consensus 419 H----~-~~~~~ivH~Dlk~~NILl~~~----~~~kl~Dfgla~ 453 (540)
. . .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 2 2 123478999999999999876 789999999876
No 434
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.82 E-value=0.003 Score=63.08 Aligned_cols=73 Identities=7% Similarity=-0.027 Sum_probs=42.9
Q ss_pred CeeeeccCccEEEEEeCC---------CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCc-cceeEEEecCCeeEEE
Q 009208 307 NILGRGGFGIVYKGCFSD---------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLV 376 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV 376 (540)
+.++.|....+|+....+ +..+++|+....... ......|.+++..+...++ .++++.. . .++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~--~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE--LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG--TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc--eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 457778888999988754 268888987543211 1123567777776643333 3555543 2 3689
Q ss_pred EecCCCCCh
Q 009208 377 YPYMPNGSV 385 (540)
Q Consensus 377 ~e~~~~gsL 385 (540)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987544
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.79 E-value=0.0083 Score=61.62 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=46.4
Q ss_pred CeeeeccCccEEEEEeCC-CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCc-cceeEEEecCCeeEEEEecCCCCC
Q 009208 307 NILGRGGFGIVYKGCFSD-GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVYPYMPNGS 384 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~e~~~~gs 384 (540)
+.|+.|-...+|+....+ +..+++|+..... .. ...-.+|..++..+...++ .++++.+. + .+|+||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 567888889999998865 4788899874322 11 1112578888887765555 45666652 2 35999999755
Q ss_pred h
Q 009208 385 V 385 (540)
Q Consensus 385 L 385 (540)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.68 E-value=0.00021 Score=64.28 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=68.1
Q ss_pred cCccccCCCccCEEEcccC-CCCCC----CCcccCCCCcccEEEeeCCCCcc----cCCccccCCCCcchhhccCccCCC
Q 009208 90 LSPWIGNLTKLQSVLLQNN-AILGP----IPASLGKLEKLQTLDLSNNKFTG----EIPDSLGDLGNLNYLRLNNNSLTG 160 (540)
Q Consensus 90 ~~~~~~~l~~L~~L~l~~N-~l~~~----~p~~~~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~ 160 (540)
+...+.+-+.|++|+|++| +|... +-+.+..-+.|+.|+|++|+|.. .+.+.+..-+.|+.|+|++|+|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344556688999999986 77631 33456677899999999999973 344556677899999999999984
Q ss_pred C----CCccccCCccccEEecccC
Q 009208 161 S----CPESLSKIESLTLVDLSYN 180 (540)
Q Consensus 161 ~----~p~~~~~l~~L~~L~l~~N 180 (540)
. +-..+..-+.|+.|+|++|
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHHhhCCceeEEECCCC
Confidence 2 3345666778999999875
No 437
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.68 E-value=0.0029 Score=63.86 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=46.1
Q ss_pred ccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCcc
Q 009208 92 PWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIES 171 (540)
Q Consensus 92 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 171 (540)
..|.++++|+.+.+. +.++..-...|.++.+|+.++|.+| ++..-...|.++++|+.+.+..+ ++..-..+|.++++
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 445555566666554 3333233445666666666666543 44222344666666666666443 44233345666666
Q ss_pred ccEEecccCc
Q 009208 172 LTLVDLSYNN 181 (540)
Q Consensus 172 L~~L~l~~N~ 181 (540)
|+.+++.+|.
T Consensus 359 L~~i~~~~~~ 368 (394)
T 4gt6_A 359 LNNIEYSGSR 368 (394)
T ss_dssp CCEEEESSCH
T ss_pred CCEEEECCce
Confidence 6666666553
No 438
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.60 E-value=0.017 Score=56.88 Aligned_cols=32 Identities=22% Similarity=0.339 Sum_probs=28.0
Q ss_pred CCCeEecCCCCCceeeCCCCCeEEcccccccc
Q 009208 423 DPKIIHRDVKAANILLDEDFEAVVGDFGLAKL 454 (540)
Q Consensus 423 ~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~ 454 (540)
...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34799999999999999888899999987763
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.48 E-value=0.0029 Score=63.38 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=53.6
Q ss_pred EEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccC
Q 009208 76 VSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNN 155 (540)
Q Consensus 76 l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~ 155 (540)
++.+.+..+ +...-...+.+++.|+.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-...|.++++|+.+.+.+
T Consensus 219 l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~ 295 (379)
T 4h09_A 219 LKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDN 295 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECC
T ss_pred cceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccc
Confidence 444444332 33233445566666666666554 34333445566666666666543 4422233455666666666666
Q ss_pred ccCCCCCCccccCCccccEEeccc
Q 009208 156 NSLTGSCPESLSKIESLTLVDLSY 179 (540)
Q Consensus 156 N~l~~~~p~~~~~l~~L~~L~l~~ 179 (540)
|.++..-..+|.++.+|+.+.|..
T Consensus 296 ~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 296 SAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCT
T ss_pred cccceehhhhhcCCCCCCEEEcCc
Confidence 665533344566666666666653
No 440
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.33 E-value=0.0028 Score=63.96 Aligned_cols=87 Identities=14% Similarity=0.054 Sum_probs=69.5
Q ss_pred CccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCc
Q 009208 91 SPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIE 170 (540)
Q Consensus 91 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 170 (540)
...|..+++|+.+.+.++ ++..-..+|.++++|+.++|.++ ++..-...|.++++|+.+++..| ++..-..+|.+++
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 356788999999999766 66455678999999999999755 77344567999999999999877 6644567899999
Q ss_pred cccEEecccC
Q 009208 171 SLTLVDLSYN 180 (540)
Q Consensus 171 ~L~~L~l~~N 180 (540)
+|+.+++..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999999765
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.21 E-value=0.0036 Score=63.11 Aligned_cols=103 Identities=10% Similarity=0.155 Sum_probs=69.3
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.+.++ +.++..-...|.++++|+.++|..| ++..-..+|.++++|+.+.|..+ ++..-...|.++++|+.+++.
T Consensus 289 ~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 289 ALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYS 365 (394)
T ss_dssp TCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEES
T ss_pred ccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEEC
Confidence 35555554 3455444568999999999999865 66455678999999999999765 773334569999999999999
Q ss_pred CccCCCCCCccccCCccccEEecccCccc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
+|.... ..+....+|+.+.+..|.+.
T Consensus 366 ~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 366 GSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp SCHHHH---HTCBCCCCC-----------
T ss_pred Cceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 987542 45777888999988877654
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.89 E-value=0.0076 Score=60.72 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=76.9
Q ss_pred cEEEecCCCCCCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhcc
Q 009208 75 YVSALGLPSQSLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLN 154 (540)
Q Consensus 75 ~l~~l~l~~~~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~ 154 (540)
.++.+.+..+..+ .-...|.++..|+.+.+..+.+. ...|..+.+|+.+.+.++ ++..-...|.++++|+.++|.
T Consensus 254 ~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp 328 (394)
T 4fs7_A 254 DLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLP 328 (394)
T ss_dssp SCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeC
Confidence 4555556555333 55677888999999988877544 357889999999999876 663445568999999999997
Q ss_pred CccCCCCCCccccCCccccEEecccCccc
Q 009208 155 NNSLTGSCPESLSKIESLTLVDLSYNNLS 183 (540)
Q Consensus 155 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 183 (540)
++ ++..-..+|.++++|+.+.+..| ++
T Consensus 329 ~~-v~~I~~~aF~~c~~L~~i~lp~~-l~ 355 (394)
T 4fs7_A 329 YL-VEEIGKRSFRGCTSLSNINFPLS-LR 355 (394)
T ss_dssp TT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred Cc-ccEEhHHhccCCCCCCEEEECcc-cc
Confidence 55 66344678999999999999876 55
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.80 E-value=0.038 Score=55.47 Aligned_cols=143 Identities=14% Similarity=0.177 Sum_probs=81.6
Q ss_pred CeeeeccCccEEEEEeCC--------CcEEEEEEeccCCcc----------ccHH-------HHHHHHHHHhcccCCC-c
Q 009208 307 NILGRGGFGIVYKGCFSD--------GALVAVKRLKDYNIA----------GGEV-------QFQTEVETISLAVHRN-L 360 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~----------~~~~-------~~~~E~~~l~~l~h~n-I 360 (540)
+.+..|-...+|+....+ +..|.+++.-..... -.+. ....|.++++.+...+ .
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667888999988753 367888886442210 0011 1234888887775333 4
Q ss_pred cceeEEEecCCeeEEEEecCCCCChhhh-c----------------ccc-CCCCCCCC--HHHHHHHHHHHH--------
Q 009208 361 LRLCGFCSTENERLLVYPYMPNGSVASR-L----------------RDH-IHGRPALD--WARRKRIALGTA-------- 412 (540)
Q Consensus 361 v~l~~~~~~~~~~~lV~e~~~~gsL~~~-l----------------~~~-~~~~~~l~--~~~~~~i~~~ia-------- 412 (540)
.++++++. +. +|+||+++-+|... + |.. ........ |....++..++.
T Consensus 138 Pkl~~~~~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 46666653 22 89999997654321 1 110 11112223 334444443321
Q ss_pred --------------HHHH----HHHhc-CCCCeEecCCCCCceeeCCC------CCeEEccccccc
Q 009208 413 --------------RGLL----YLHEQ-CDPKIIHRDVKAANILLDED------FEAVVGDFGLAK 453 (540)
Q Consensus 413 --------------~~l~----~LH~~-~~~~ivH~Dlk~~NILl~~~------~~~kl~Dfgla~ 453 (540)
+-+. +|... ....++|+|+.+.||+++++ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 22221 23468899999999999876 789999999875
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.09 E-value=0.035 Score=55.31 Aligned_cols=88 Identities=13% Similarity=0.053 Sum_probs=37.9
Q ss_pred cccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeCCCCcccCCccccCCCCcchhhccCccCCCCCCccccCCccc
Q 009208 93 WIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSNNKFTGEIPDSLGDLGNLNYLRLNNNSLTGSCPESLSKIESL 172 (540)
Q Consensus 93 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 172 (540)
.+...++|+.+.+..+ +.......|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3444445555554433 22123334445555555555443 33122233444555555554332 221222344455555
Q ss_pred cEEecccCccc
Q 009208 173 TLVDLSYNNLS 183 (540)
Q Consensus 173 ~~L~l~~N~l~ 183 (540)
+.+.+.+|.++
T Consensus 289 ~~i~l~~~~i~ 299 (379)
T 4h09_A 289 TKVVMDNSAIE 299 (379)
T ss_dssp CEEEECCTTCC
T ss_pred ccccccccccc
Confidence 55555544444
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.82 E-value=0.073 Score=53.90 Aligned_cols=140 Identities=9% Similarity=0.067 Sum_probs=82.4
Q ss_pred CeeeeccCccEEEEEeCC--------CcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCc-cceeEEEecCCeeEEEE
Q 009208 307 NILGRGGFGIVYKGCFSD--------GALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNL-LRLCGFCSTENERLLVY 377 (540)
Q Consensus 307 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lV~ 377 (540)
+.+..|-...+|+....+ +..+++|+..... .......+|.++++.+...++ .++++.+ . .++|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t--~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV--GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc--chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence 456678888999998753 5789999864422 111123567777776643333 3455433 2 37899
Q ss_pred ecCCCCChhhh-----------------cccc-C-----C---CCCCCCHHHHHHHHHHH-------------------H
Q 009208 378 PYMPNGSVASR-----------------LRDH-I-----H---GRPALDWARRKRIALGT-------------------A 412 (540)
Q Consensus 378 e~~~~gsL~~~-----------------l~~~-~-----~---~~~~l~~~~~~~i~~~i-------------------a 412 (540)
||++|.+|..- ||.. . . ...+..|.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 99998764321 1110 0 1 11222344444443322 2
Q ss_pred HHHHHHHh---------------------cCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 413 RGLLYLHE---------------------QCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 413 ~~l~~LH~---------------------~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
..+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+.
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~ 290 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSA 290 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCC
Confidence 22333321 11346899999999999 778899999999886
No 446
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=94.01 E-value=0.044 Score=35.50 Aligned_cols=32 Identities=19% Similarity=0.409 Sum_probs=20.0
Q ss_pred chhhhhhhhhhHHHHHHHHHhhhhheeccccc
Q 009208 239 VAVALGASFGAAFFVIIVVGLLVWLRYRHNQQ 270 (540)
Q Consensus 239 ~~iii~~~~g~~~~~ii~~~~~~~~~~r~~~~ 270 (540)
..++.+++.|.++++++++.+++++|+|+.++
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~~ 42 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHIVR 42 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 45666666666666666666666666665543
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.83 E-value=0.061 Score=34.72 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=20.3
Q ss_pred cchhhhhhhhhhHHHHHHHHHhhhhheeccccc
Q 009208 238 RVAVALGASFGAAFFVIIVVGLLVWLRYRHNQQ 270 (540)
Q Consensus 238 ~~~iii~~~~g~~~~~ii~~~~~~~~~~r~~~~ 270 (540)
...++.+++.|.++++++++.+++++|+|+.++
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 345666666666666666666666666665543
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=92.14 E-value=0.13 Score=33.14 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=17.9
Q ss_pred hhhhhhhhhhHHHHHHHHHhhhhheecccc
Q 009208 240 AVALGASFGAAFFVIIVVGLLVWLRYRHNQ 269 (540)
Q Consensus 240 ~iii~~~~g~~~~~ii~~~~~~~~~~r~~~ 269 (540)
..+++.++|.++++++.+.+++|+|+|+.+
T Consensus 12 ~~Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 12 TSIISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred cchHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 344555566555566666666676666654
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.99 E-value=0.087 Score=53.04 Aligned_cols=29 Identities=31% Similarity=0.461 Sum_probs=24.8
Q ss_pred CeEecCCCCCceee------CCCCCeEEccccccc
Q 009208 425 KIIHRDVKAANILL------DEDFEAVVGDFGLAK 453 (540)
Q Consensus 425 ~ivH~Dlk~~NILl------~~~~~~kl~Dfgla~ 453 (540)
.++|+|+.+.||++ +++..+.++||.+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35799999999999 456789999999886
No 450
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=89.37 E-value=0.59 Score=42.21 Aligned_cols=105 Identities=16% Similarity=0.095 Sum_probs=67.5
Q ss_pred CChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEcccccccccCCCCCce
Q 009208 383 GSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHV 462 (540)
Q Consensus 383 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~~~~~~~~~~ 462 (540)
-||.+.|... ..++++.+++.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.+.+.+ +.+.
T Consensus 33 vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc---------
Confidence 3788888754 46899999999999999998776221111 1233456889999999998764 1110
Q ss_pred eeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 463 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 463 ~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
.....+.|||... ...+.+.=|||+|+++|.-+--..|-+
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~ 137 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN 137 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc
Confidence 0123456888753 345678889999999998877555543
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.12 E-value=0.1 Score=53.51 Aligned_cols=61 Identities=5% Similarity=-0.046 Sum_probs=17.6
Q ss_pred cCCeeeeccCccEEEEEeCC-CcEEEE------EEeccCCccc-cHHHHHHHHHHHhcccCCCccceeEEEe
Q 009208 305 AKNILGRGGFGIVYKGCFSD-GALVAV------KRLKDYNIAG-GEVQFQTEVETISLAVHRNLLRLCGFCS 368 (540)
Q Consensus 305 ~~~~lG~G~~g~Vy~~~~~~-g~~vav------K~~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 368 (540)
+.+.+| ||.||+|.+.. ..+||| |..+...... ....|.+|..++...+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999999864 367888 7766533322 2346888999999999999999988764
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.35 E-value=2.1 Score=38.52 Aligned_cols=116 Identities=10% Similarity=0.098 Sum_probs=77.0
Q ss_pred cCCCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 009208 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLLYLHEQCDPKIIHRDVKAAN 435 (540)
Q Consensus 356 ~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~Dlk~~N 435 (540)
.||+.++. .+....+...+.|+.-+.+-=...++ ..+...+++++..|+....+++.. +|=-++|+|
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik-------~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK-------SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG-------GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH-------hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 57888866 56666666666666544322111232 467889999999999988666654 788899999
Q ss_pred eeeCCCCCeEEcccccccccCCCCCceeeccccccccccccccccCCCCccCCeehhhHHHHHHHhCCCCCC
Q 009208 436 ILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALD 507 (540)
Q Consensus 436 ILl~~~~~~kl~Dfgla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~Dv~S~Gvil~elltg~~p~~ 507 (540)
++++.++.+++.=.|+-..+ +|.- .++..=.-.+=+++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999866654322 2211 1111112236678888889988886
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=84.49 E-value=2.6 Score=37.96 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=60.3
Q ss_pred cCCCccceeEEEecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCC
Q 009208 356 VHRNLLRLCGFCSTENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGTARGLL-YLHEQCDPKIIHRDVKAA 434 (540)
Q Consensus 356 ~h~nIv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~Dlk~~ 434 (540)
.||++ -...-.+.+...+.|+.-+++.=...++ ..+...+++++..++.... +++.. +|--++|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 47777 4555577777777777654442222332 3677889999999888766 55544 77889999
Q ss_pred ceeeCCCCCeEEccccccc
Q 009208 435 NILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 435 NILl~~~~~~kl~Dfgla~ 453 (540)
|+++|.++.+++.=.|+-.
T Consensus 114 NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp GEEECTTCCEEESCCEETT
T ss_pred eEEEeCCCcEEEEEcCCcc
Confidence 9999999999998666543
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=82.30 E-value=1.3 Score=27.66 Aligned_cols=14 Identities=14% Similarity=0.157 Sum_probs=6.8
Q ss_pred hhhhhhhhhhHHHH
Q 009208 240 AVALGASFGAAFFV 253 (540)
Q Consensus 240 ~iii~~~~g~~~~~ 253 (540)
..+.++++|+++.+
T Consensus 11 GaIAGiVvG~v~gv 24 (38)
T 2k1k_A 11 GEIVAVIFGLLLGA 24 (38)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CceeeeehHHHHHH
Confidence 34455555554433
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=81.10 E-value=1 Score=28.64 Aligned_cols=26 Identities=19% Similarity=0.271 Sum_probs=12.2
Q ss_pred chhhhhhhhhhHHHHHHHHHhhhhhe
Q 009208 239 VAVALGASFGAAFFVIIVVGLLVWLR 264 (540)
Q Consensus 239 ~~iii~~~~g~~~~~ii~~~~~~~~~ 264 (540)
..++.+++.|.++++.+++.+++++|
T Consensus 13 ~~I~~~vv~Gv~ll~~iv~~~~~~~r 38 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLLVLAGVGFFIHR 38 (41)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSSSS
T ss_pred EEEEeehhHHHHHHHHHHHHheeEee
Confidence 44555555565554423333334433
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=71.32 E-value=1.1 Score=27.24 Aligned_cols=25 Identities=24% Similarity=0.494 Sum_probs=12.8
Q ss_pred hhhhhhhhHHHHHHHHHhhhhheec
Q 009208 242 ALGASFGAAFFVIIVVGLLVWLRYR 266 (540)
Q Consensus 242 ii~~~~g~~~~~ii~~~~~~~~~~r 266 (540)
++..++|.++++++.+++.+++|+|
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 3333445444555555555565555
No 457
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=51.65 E-value=7.2 Score=23.20 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=14.2
Q ss_pred hhhhhhhhhhHHHHHHHHHhhhhheec
Q 009208 240 AVALGASFGAAFFVIIVVGLLVWLRYR 266 (540)
Q Consensus 240 ~iii~~~~g~~~~~ii~~~~~~~~~~r 266 (540)
..++.+++|.++++.++.+.+++||-|
T Consensus 7 ~malt~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 7 TMALTVIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCceeEEEccc
Confidence 344555566555555555555555444
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=50.47 E-value=37 Score=26.04 Aligned_cols=46 Identities=17% Similarity=0.134 Sum_probs=26.3
Q ss_pred CCccccCccccCCCccCEEEcccCCCCCCCCcccCCCCcccEEEeeC
Q 009208 85 SLSGTLSPWIGNLTKLQSVLLQNNAILGPIPASLGKLEKLQTLDLSN 131 (540)
Q Consensus 85 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ls~ 131 (540)
+++.+-...|.++++|+.+.|..+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344334456666666666666654 3334445666666666666654
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=46.29 E-value=1.5e+02 Score=30.95 Aligned_cols=47 Identities=19% Similarity=0.123 Sum_probs=33.7
Q ss_pred CHHHHHHHHHHHHH--HHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEccccccc
Q 009208 400 DWARRKRIALGTAR--GLLYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAK 453 (540)
Q Consensus 400 ~~~~~~~i~~~ia~--~l~~LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Dfgla~ 453 (540)
.|..+..++...|- .+.|+=.. +|=+++|||++.+|++.=+|||..-
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 35556666555543 34444433 6889999999999999999999874
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.84 E-value=31 Score=26.53 Aligned_cols=37 Identities=11% Similarity=0.010 Sum_probs=16.7
Q ss_pred ccCCCCcchhhccCccCCCCCCccccCCccccEEeccc
Q 009208 142 LGDLGNLNYLRLNNNSLTGSCPESLSKIESLTLVDLSY 179 (540)
Q Consensus 142 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 179 (540)
|.++++|+.+.+-.+ ++..-..+|.++.+|+.+.+..
T Consensus 16 F~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 16 FAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred hcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 444444444444432 2212234455555555555544
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=31.92 E-value=37 Score=23.70 Aligned_cols=8 Identities=38% Similarity=0.733 Sum_probs=3.3
Q ss_pred hhhhhhhh
Q 009208 241 VALGASFG 248 (540)
Q Consensus 241 iii~~~~g 248 (540)
+++|.+++
T Consensus 12 ivlGg~~~ 19 (70)
T 2klu_A 12 IVLGGVAG 19 (70)
T ss_dssp HHHHHHHH
T ss_pred HHHhHHHH
Confidence 34444443
No 462
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=26.46 E-value=15 Score=18.98 Aligned_cols=9 Identities=44% Similarity=1.191 Sum_probs=6.8
Q ss_pred CCccceeee
Q 009208 61 DPCSWRMIT 69 (540)
Q Consensus 61 ~~c~w~gv~ 69 (540)
-.|+|+|+.
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 359999974
No 463
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.50 E-value=2.9e+02 Score=26.36 Aligned_cols=132 Identities=13% Similarity=0.006 Sum_probs=66.6
Q ss_pred eccCccEEEEEeCCCcEEEEEEeccCCccccHHHHHHHHHHHhcccCCCccceeEEE-----------------------
Q 009208 311 RGGFGIVYKGCFSDGALVAVKRLKDYNIAGGEVQFQTEVETISLAVHRNLLRLCGFC----------------------- 367 (540)
Q Consensus 311 ~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~----------------------- 367 (540)
++|.+.||.... ++..|.||... . ...+-|..++...-.+.-|+.--+ .+.
T Consensus 78 ~~Gstgvff~~t-d~~~~VVK~s~--~--l~~E~l~s~LA~~LGlpiP~~Riv-~~~~~E~~e~~~~L~~~~~~~~~l~~ 151 (342)
T 1cja_A 78 EKGTEGLFFVET-ESGVFIVKRST--N--IESETFCSLLCMRLGLHAPKVRVV-SSNSEEGTNMLECLAAIDKSFRVITT 151 (342)
T ss_dssp CSTTSCEEEEEE-SSCEEEEECCT--T--HHHHHHHHHHHHHHTCCCCCEEEE-ESSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred cCCCCCeEEEEe-CCCEEEEeCcH--H--HHHHHHHHHHHHHhCCCCCCeeEE-eeCcHHHHHHHHHHHHhhhhhHHHHH
Confidence 344566776666 68889999542 1 112234444444444444442111 100
Q ss_pred ecCCeeEEEEecCCCCChhhhccccCCCCCCCCHHHHHHHHHHH--HHHHHHHHhcCCC-C-eEecCCCCCceeeCCCCC
Q 009208 368 STENERLLVYPYMPNGSVASRLRDHIHGRPALDWARRKRIALGT--ARGLLYLHEQCDP-K-IIHRDVKAANILLDEDFE 443 (540)
Q Consensus 368 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i--a~~l~~LH~~~~~-~-ivH~Dlk~~NILl~~~~~ 443 (540)
......+++|+|.+|..|.+.=.... ...+... ...++ .-++.++..+... + +.+.--.++|||+++++.
T Consensus 152 l~~~~~~l~meyv~G~~L~e~~~~~~--~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 152 LANQANILLMELVRGITLNKLTTTSA--PEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HTTCSEEEEEECCCEEESTTCCSSSH--HHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred hhcccceehhhhcCCCccccchhhhh--hhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 01224669999999766543211100 0112222 22332 2235555544221 1 222235789999986554
Q ss_pred -eEEcccccccc
Q 009208 444 -AVVGDFGLAKL 454 (540)
Q Consensus 444 -~kl~Dfgla~~ 454 (540)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88999998864
Done!