BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009209
(540 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3AQU|A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|B Chain B, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|C Chain C, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
pdb|3AQU|D Chain D, Crystal Structure Of A Class V Chitinase From Arabidopsis
Thaliana
Length = 356
Score = 255 bits (652), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 204/356 (57%), Gaps = 5/356 (1%)
Query: 24 QTLIKVGYWDSGDGFPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVK 83
QT++K YW FP++D++ +LFTHL C FAD+NS T ++++S +++ +FS FT TV+
Sbjct: 2 QTVVKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQ 61
Query: 84 IKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSAN 143
+NPS+ TLLSIGGG + I++AR YGF GLDL W +
Sbjct: 62 RRNPSVKTLLSIGGG-IADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYPS 120
Query: 144 TSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
++ + N G L +EWR+AV EA ++S + +L+L A V +S + YPV ++ L+W
Sbjct: 121 SATEMTNFGTLLREWRSAVVAEA-SSSGKPRLLLAAAVFYSNNYYSVLYPVSAVASSLDW 179
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-NSVSNTEYGITEWIEEGLSADKLVLCLPFYGFA 262
V++M + P W+ TG AAL+DP N+ + + G WI+ GL A K VL P+YG+A
Sbjct: 180 VNLMAYDFYGPGWSRVTGPPAALFDPSNAGPSGDAGTRSWIQAGLPAKKAVLGFPYYGYA 239
Query: 263 WTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
W L + A TG A+ DG + Y +I+ I + G +YNST V +YC G
Sbjct: 240 WRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFIVDNG--ATTVYNSTVVGDYCYAGTN 297
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAEEDNKNRQNKRLL 378
W G+DD +++ KV YAK++ L GY+ W V D LSRAA++ + R +
Sbjct: 298 WIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQAWDATTATTRTI 353
>pdb|3ALG|A Chain A, Crystal Structure Of Class V Chitinase (E115q Mutant) From
Nicotiana Tobaccum In Complex With Nag4
Length = 353
Score = 254 bits (650), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 199/345 (57%), Gaps = 10/345 (2%)
Query: 27 IKVGYWDSGDGFPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKN 86
+K GYW G +++++ LFTHL C FAD+N +L +SP +++ F FT TV+ KN
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63
Query: 87 PSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
PS+ T LSI GG N I++AR GF GLDL W ++
Sbjct: 64 PSVKTFLSIAGG-RANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWQYPLSAA 122
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHV 206
D N+G L EWR A++ EAR NS ++ L+LTA V++SP YPV+S+ + L+W+++
Sbjct: 123 DMTNLGTLLNEWRTAINTEAR-NSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINL 181
Query: 207 MTTGYSKPTWT-NFTGAHAALYDP-NSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWT 264
M + P W+ + T +HA L+DP N VS ++ GI WI+ G+ KLVL +PFYG+AW
Sbjct: 182 MAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSD-GINAWIQAGVPTKKLVLGIPFYGYAWR 240
Query: 265 LVKPEDNGIGAAATGPA---LYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGK 321
LV +G+ A A G + DDG +TY I+++I +YN+T V +YC G
Sbjct: 241 LVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDYCYSGS 298
Query: 322 IWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
W +DD + VR KV+Y K + L GY+ W V+ D W LSR A++
Sbjct: 299 NWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQ 343
>pdb|3ALF|A Chain A, Crystal Structure Of Class V Chitinase From Nicotiana
Tobaccum
Length = 353
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 199/345 (57%), Gaps = 10/345 (2%)
Query: 27 IKVGYWDSGDGFPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKN 86
+K GYW G +++++ LFTHL C FAD+N +L +SP +++ F FT TV+ KN
Sbjct: 4 VKGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN 63
Query: 87 PSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
PS+ T LSI GG N I++AR GF GLDL W ++
Sbjct: 64 PSVKTFLSIAGG-RANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPLSAA 122
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHV 206
D N+G L EWR A++ EAR NS ++ L+LTA V++SP YPV+S+ + L+W+++
Sbjct: 123 DMTNLGTLLNEWRTAINTEAR-NSGRAALLLTAAVSNSPRVNGLNYPVESLARNLDWINL 181
Query: 207 MTTGYSKPTWT-NFTGAHAALYDP-NSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWT 264
M + P W+ + T +HA L+DP N VS ++ GI WI+ G+ KLVL +PFYG+AW
Sbjct: 182 MAYDFYGPNWSPSQTNSHAQLFDPVNHVSGSD-GINAWIQAGVPTKKLVLGIPFYGYAWR 240
Query: 265 LVKPEDNGIGAAATGPA---LYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGK 321
LV +G+ A A G + DDG +TY I+++I +YN+T V +YC G
Sbjct: 241 LVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVE--SRATTVYNATIVGDYCYSGS 298
Query: 322 IWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
W +DD + VR KV+Y K + L GY+ W V+ D W LSR A++
Sbjct: 299 NWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSRTASQ 343
>pdb|1GUV|A Chain A, Structure Of Human Chitotriosidase
Length = 366
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 158/338 (46%), Gaps = 31/338 (9%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D++ +L THL+ FA + T ++LS + ++E + +K NP + TLL+IGG
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGG 77
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N I+ R Y F GLDL W + + + DK
Sbjct: 78 WNF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L ++ A EA+ S + +L+L+A V A Y VD I Q L++V++M +
Sbjct: 137 LVQDLANAFQQEAQT-SGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 214 PTWTNFTGAHAALYDPNSVS------NTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W TG ++ LY S N + + +W+E+G A KL+L +P YG ++TL
Sbjct: 196 -SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLEKGTPASKLILGMPTYGRSFTLAS 254
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEI---KNHIKNYGPNVRVMYNSTYVVNYCSI 319
D +GA AT GP + G++ Y E+ K K + +V Y + N
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPY--IFRDNQ--- 309
Query: 320 GKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W GFDDVE+ + KVSY K+K L G VW + D +
Sbjct: 310 ---WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDF 344
>pdb|1HKI|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Glucoallosamidin B
pdb|1HKJ|A Chain A, Crystal Structure Of Human Chitinase In Complex With
Methylallosamidin
pdb|1HKM|A Chain A, High Resolution Crystal Structure Of Human Chitinase In
Complex With Demethylallosamidin
Length = 365
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 31/338 (9%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D++ +L THL+ FA + T ++LS + ++E + +K NP + TLL+IGG
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGG 77
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N I+ R Y F GLDL W + + + DK
Sbjct: 78 WNF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L ++ A EA+ S + +L+L+A V A Y VD I Q L++V++M +
Sbjct: 137 LVQDLANAFQQEAQT-SGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 214 PTWTNFTGAHAALYDPNSVS------NTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W TG ++ LY S N + + +W+++G A KL+L +P YG ++TL
Sbjct: 196 -SWEKVTGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEI---KNHIKNYGPNVRVMYNSTYVVNYCSI 319
D +GA AT GP + G++ Y E+ K K + +V Y + N
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPY--IFRDNQ--- 309
Query: 320 GKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W GFDDVE+ + KVSY K+K L G VW + D +
Sbjct: 310 ---WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDF 344
>pdb|1HKK|A Chain A, High Resoultion Crystal Structure Of Human Chitinase In
Complex With Allosamidin
Length = 364
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 31/338 (9%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D++ +L THL+ FA + T ++LS + ++E + +K NP + TLL+IGG
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGG 77
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N I+ R Y F GLDL W + + + DK
Sbjct: 78 WNF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L ++ A EA+ S + +L+L+A V A Y VD I Q L++V++M +
Sbjct: 137 LVQDLANAFQQEAQT-SGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 214 PTWTNFTGAHAALYDPNSVS------NTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W TG ++ LY S N + + +W+++G A KL+L +P YG ++TL
Sbjct: 196 -SWEKVTGHNSPLYKRQEQSGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEI---KNHIKNYGPNVRVMYNSTYVVNYCSI 319
D +GA AT GP + G++ Y E+ K K + +V Y + N
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPY--IFRDNQ--- 309
Query: 320 GKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W GFDDVE+ + KVSY K+K L G VW + D +
Sbjct: 310 ---WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDF 344
>pdb|1LG1|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Chitobiose
pdb|1LG2|A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With
Ethylene Glycol
pdb|1LQ0|A Chain A, Crystal Structure Of Human Chitotriosidase At 2.2 Angstrom
Resolution
Length = 365
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 31/338 (9%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D++ +L THL+ FA + T ++LS + ++E + +K NP + TLL+IGG
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGG 77
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N I+ R Y F GLDL W + + + DK
Sbjct: 78 WNF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L ++ A EA+ S + +L+L+A V A Y VD I Q L++V++M +
Sbjct: 137 LVQDLANAFQQEAQT-SGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 214 PTWTNFTGAHAALYDPNSVS------NTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W TG ++ LY S N + + +W+++G A KL+L +P YG ++TL
Sbjct: 196 -SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEI---KNHIKNYGPNVRVMYNSTYVVNYCSI 319
D +GA AT GP + G++ Y E+ K K + +V Y + N
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPY--IFRDNQ--- 309
Query: 320 GKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W GFDDVE+ + KVSY K+K L G VW + D +
Sbjct: 310 ---WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDF 344
>pdb|1WAW|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Human
Chitinase
pdb|1WB0|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitor Argifin Against Human
Chitinase
Length = 445
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 31/338 (9%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D++ +L THL+ FA + T ++LS + ++E + +K NP + TLL+IGG
Sbjct: 20 FLPKDLDPSLCTHLIYAFAGM--TNHQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGG 77
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N I+ R Y F GLDL W + + + DK
Sbjct: 78 WNF-GTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTT 136
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L ++ A EA+ S + +L+L+A V A Y VD I Q L++V++M +
Sbjct: 137 LVQDLANAFQQEAQT-SGKERLLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHG 195
Query: 214 PTWTNFTGAHAALYDPNSVS------NTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W TG ++ LY S N + + +W+++G A KL+L +P YG ++TL
Sbjct: 196 -SWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWLQKGTPASKLILGMPTYGRSFTLAS 254
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEI---KNHIKNYGPNVRVMYNSTYVVNYCSI 319
D +GA AT GP + G++ Y E+ K K + +V Y + N
Sbjct: 255 SSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCSWKGATKQRIQDQKVPY--IFRDNQ--- 309
Query: 320 GKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W GFDDVE+ + KVSY K+K L G VW + D +
Sbjct: 310 ---WVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDF 344
>pdb|1HJV|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|C Chain C, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJV|D Chain D, Crystal Structure Of Hcgp-39 In Complex With Chitin
Tetramer
pdb|1HJW|A Chain A, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJW|B Chain B, Crystal Structure Of Hcgp-39 In Complex With Chitin
Octamer
pdb|1HJX|A Chain A, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|B Chain B, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|C Chain C, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1HJX|D Chain D, Ligand-Induced Signalling And Conformational Change Of The
39 Kd Glycoprotein From Human Articular Chondrocytes
pdb|1NWR|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWR|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39)
pdb|1NWS|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWS|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitobiose
pdb|1NWT|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWT|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitopentaose
pdb|1NWU|A Chain A, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|B Chain B, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|C Chain C, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
pdb|1NWU|D Chain D, Crystal Structure Of Human Cartilage Gp39 (Hc-Gp39) In
Complex With Chitotetraose
Length = 362
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 167/339 (49%), Gaps = 32/339 (9%)
Query: 35 GDG--FPISDVNFALFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSI 89
GDG FP + F L TH++ FA++++ T+E ++ +T+K +NP++
Sbjct: 16 GDGSCFPDALDRF-LCTHIIYSFANISNDHIDTWEW-----NDVTLYGMLNTLKNRNPNL 69
Query: 90 TTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKY 149
TLLS+GG N + R +GF GLDL+W RDK
Sbjct: 70 KTLLSVGGWNFGS-QRFSKIASNTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPG-RRDKQ 127
Query: 150 NIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTT 209
+ L KE +A EA+ + QL+L+A ++ ++ ++Y + I Q+L+++ +MT
Sbjct: 128 HFTTLIKEMKAEFIKEAQ--PGKKQLLLSAALSAGKVTIDSSYDIAKISQHLDFISIMTY 185
Query: 210 GYSKPTWTNFTGAHAALY------DPNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAW 263
+ W TG H+ L+ P+ SNT+Y + + G A KLV+ +P +G ++
Sbjct: 186 DFHG-AWRGTTGHHSPLFRGQEDASPDRFSNTDYAVGYMLRLGAPASKLVMGIPTFGRSF 244
Query: 264 TLVKPEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCS 318
TL E G+GA +GP + + G + Y EI + ++ G V + V Y +
Sbjct: 245 TLASSE-TGVGAPISGPGIPGRFTKEAGTLAYYEICDFLR--GATVHRILGQQ--VPYAT 299
Query: 319 IGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
G W G+DD E+V+ KV Y K+++L G VW + D +
Sbjct: 300 KGNQWVGYDDQESVKSKVQYLKDRQLAGAMVWALDLDDF 338
>pdb|3FXY|A Chain A, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|B Chain B, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|C Chain C, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FXY|D Chain D, Acidic Mammalian Chinase, Catalytic Domain
pdb|3FY1|A Chain A, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3FY1|B Chain B, The Acidic Mammalian Chitinase Catalytic Domain In Complex
With Methylallosamidin
pdb|3RM4|A Chain A, Amcase In Complex With Compound 1
pdb|3RM4|B Chain B, Amcase In Complex With Compound 1
pdb|3RM8|A Chain A, Amcase In Complex With Compound 2
pdb|3RM8|B Chain B, Amcase In Complex With Compound 2
pdb|3RM9|A Chain A, Amcase In Complex With Compound 3
pdb|3RM9|B Chain B, Amcase In Complex With Compound 3
pdb|3RME|A Chain A, Amcase In Complex With Compound 5
pdb|3RME|B Chain B, Amcase In Complex With Compound 5
Length = 395
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 155/335 (46%), Gaps = 23/335 (6%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D+N L THL+ FA + + E++ ++ + +K KN + TLL+IGG
Sbjct: 20 FMPDDINPCLCTHLIYAFAGMQNN--EITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGG 77
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N IK R Y F GLD W + + +DK+ +
Sbjct: 78 WNF-GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTV 136
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L +E R A + EA+ ++ +L++TA VA + + Y + + QYL+++HVMT
Sbjct: 137 LVQEMREAFEQEAKQ-INKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHG 195
Query: 214 PTWTNFTGAHAALYD------PNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W +TG ++ LY N+ N +Y + W + G A+KL++ P YG + L
Sbjct: 196 -SWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSN 254
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
P + GIGA + GP + G+ Y EI +KN +++ V Y G +
Sbjct: 255 PSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNV 311
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W G+D+V++ +K + K K G VW + D +
Sbjct: 312 WVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDDF 346
>pdb|2YBT|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBT|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin C
pdb|2YBU|A Chain A, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|B Chain B, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|C Chain C, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|D Chain D, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|E Chain E, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
pdb|2YBU|F Chain F, Crystal Structure Of Human Acidic Chitinase In Complex
With Bisdionin F
Length = 381
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 155/335 (46%), Gaps = 23/335 (6%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F D+N L THL+ FA + + E++ ++ + +K KN + TLL+IGG
Sbjct: 24 FMPDDINPCLCTHLIYAFAGMQNN--EITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGG 81
Query: 98 GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDKYNIGI 153
N IK R Y F GLD W + + +DK+ +
Sbjct: 82 WNF-GTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTV 140
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L +E R A + EA+ ++ +L++TA VA + + Y + + QYL+++HVMT
Sbjct: 141 LVQEMREAFEQEAKQ-INKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHG 199
Query: 214 PTWTNFTGAHAALYD------PNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
+W +TG ++ LY N+ N +Y + W + G A+KL++ P YG + L
Sbjct: 200 -SWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSN 258
Query: 268 PEDNGIGAAAT-----GPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
P + GIGA + GP + G+ Y EI +KN +++ V Y G +
Sbjct: 259 PSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN---GATQGWDAPQEVPYAYQGNV 315
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W G+D++++ +K + K K G VW + D +
Sbjct: 316 WVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDF 350
>pdb|1LJY|A Chain A, Crystal Structure Of A Novel Regulatory 40 Kda Mammary
Gland Protein (Mgp-40) Secreted During Involution
Length = 361
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 161/335 (48%), Gaps = 25/335 (7%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP + TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPKLKTLL 73
Query: 94 SIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIG 152
S+GG N P R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGPERFSAIASKTQSRRTFIKSVP--PFLRTHGFDGLDLAWLYPG-RRDKRHLT 130
Query: 153 ILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYS 212
L KE +A EA+ + +L+L+A V+ ++ Y + I ++L+++ ++T +
Sbjct: 131 ALVKEMKAEFAREAQ--AGTERLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFH 188
Query: 213 KPTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
W G H+ L+ NS SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 189 G-AWRQTVGHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSFTLAS 247
Query: 268 PEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
+ +G GA +GP + + G++ Y EI + + +G + V Y + G
Sbjct: 248 SKTDG-GAPISGPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQ 302
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W +DD E+V+ K Y K ++L G VW + D +
Sbjct: 303 WVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1SYT|A Chain A, Crystal Structure Of Signalling Protein From Goat Spg-40
In The Presense Of N,n',n''-triacetyl-chitotriose At
2.6a Resolution
Length = 361
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 161/335 (48%), Gaps = 25/335 (7%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP + TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPKLKTLL 73
Query: 94 SIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIG 152
S+GG N P R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGPERFSKIASKTQSRRTFIKSVP--PFLRTHGFDGLDLAWLYPG-RRDKRHLT 130
Query: 153 ILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYS 212
L KE +A EA+ + +L+L+A V+ ++ Y + I ++L+++ ++T +
Sbjct: 131 ALVKEMKAEFAREAQ--AGTERLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFH 188
Query: 213 KPTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
W G H+ L+ NS SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 189 G-AWRQTVGHHSPLFRGNSDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSFTLAS 247
Query: 268 PEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
+ +G GA +GP + + G++ Y EI + + +G + V Y + G
Sbjct: 248 SKTDG-GAPISGPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQ 302
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W +DD E+V+ K Y K ++L G VW + D +
Sbjct: 303 WVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1ZBV|A Chain A, Crystal Structure Of The Goat Signalling Protein (Spg-40)
Complexed With A Designed Peptide Trp-Pro-Trp At 3.2a
Resolution
pdb|1ZBW|A Chain A, Crystal Structure Of The Complex Formed Between Signalling
Protein From Goat Mammary Gland (Spg-40) And A
Tripeptide Trp-Pro-Trp At 2.8a Resolution
pdb|1ZU8|A Chain A, Crystal Structure Of The Goat Signalling Protein With A
Bound Trisaccharide Reveals That Trp78 Reduces The
Carbohydrate Binding Site To Half
pdb|2AOS|A Chain A, Protein-protein Interactions Of Protective Signalling
Factor: Crystal Structure Of Ternary Complex Involving
Signalling Protein From Goat (spg-40), Tetrasaccharide
And A Tripeptide Trp-pro-trp At 2.9 A Resolution
pdb|2B31|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 3.1 A
Resolution Reveals Large Scale Conformational Changes In
The Residues Of Tim Barrel
pdb|2DSZ|A Chain A, Three Dimensional Structure Of A Goat Signalling Protein
Secreted During Involution
pdb|2DT0|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With The Trimer Of N-acetylglucosamine At 2.45a
Resolution
pdb|2DT1|A Chain A, Crystal Structure Of The Complex Of Goat Signalling
Protein With Tetrasaccharide At 2.09 A Resolution
pdb|2DT2|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein With Pentasaccharide At 2.9a
Resolution
pdb|2DT3|A Chain A, Crystal Structure Of The Complex Formed Between Goat
Signalling Protein And The Hexasaccharide At 2.28 A
Resolution
pdb|2O92|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Tetrasaccharide At 3.0a Resolution
pdb|2OLH|A Chain A, Crystal Structure Of A Signalling Protein (Spg-40) Complex
With Cellobiose At 2.78 A Resolution
Length = 361
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 161/335 (48%), Gaps = 25/335 (7%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP + TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPKLKTLL 73
Query: 94 SIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIG 152
S+GG N P R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGPERFSKIASKTQSRRTFIKSVP--PFLRTHGFDGLDLAWLYPG-RRDKRHLT 130
Query: 153 ILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYS 212
L KE +A EA+ + +L+L+A V+ ++ Y + I ++L+++ ++T +
Sbjct: 131 ALVKEMKAEFAREAQ--AGTERLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFH 188
Query: 213 KPTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
W G H+ L+ NS SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 189 G-AWRQTVGHHSPLFRGNSDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSFTLAS 247
Query: 268 PEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
+ + +GA +GP + + G++ Y EI + + +G + V Y + G
Sbjct: 248 SKTD-VGAPISGPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQ 302
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W +DD E+V+ K Y K ++L G VW + D +
Sbjct: 303 WVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1SR0|A Chain A, Crystal Structure Of Signalling Protein From Sheep(Sps-40)
At 3.0a Resolution Using Crystal Grown In The Presence
Of Polysaccharides
pdb|1ZBK|A Chain A, Recognition Of Specific Peptide Sequences By Signalling
Protein From Sheep Mammary Gland (Sps-40): Crystal
Structure Of The Complex Of Sps-40 With A Peptide
Trp-Pro-Trp At 2.9a Resolution
pdb|1ZL1|A Chain A, Crystal Structure Of The Complex Of Signalling Protein
From Sheep (Sps-40) With A Designed Peptide Trp-His-Trp
Reveals Significance Of Asn79 And Trp191 In The Complex
Formation
pdb|2FDM|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Glycoprotein Frm Sheep (Sps-40)with Hexasaccharide
(Nag6) And Peptide Trp-Pro-Trp At 3.0a Resolution
pdb|2G41|A Chain A, Crystal Structure Of The Complex Of Sheep Signalling
Glycoprotein With Chitin Trimer At 3.0a Resolution
pdb|2G8Z|A Chain A, Crystal Structure Of The Ternary Complex Of Signalling
Protein From Sheep (Sps-40) With Trimer And Designed
Peptide At 2.5a Resolution
pdb|2DPE|A Chain A, Crystal Structure Of A Secretory 40kda Glycoprotein From
Sheep At 2.0a Resolution
pdb|2DSU|A Chain A, Binding Of Chitin-Like Polysaccharide To Protective
Signalling Factor: Crystal Structure Of The Complex
Formed Between Signalling Protein From Sheep (Sps-40)
With A Tetrasaccharide At 2.2 A Resolution
pdb|2DSV|A Chain A, Interactions Of Protective Signalling Factor With
Chitin-like Polysaccharide: Crystal Structure Of The
Complex Between Signalling Protein From Sheep (sps-40)
And A Hexasaccharide At 2.5a Resolution
pdb|2DSW|A Chain A, Binding Of Chitin-Like Polysaccharides To Protective
Signalling Factor: Crystal Structure Of The Complex Of
Signalling Protein From Sheep (Sps-40) With A
Pentasaccharide At 2.8 A Resolution
Length = 361
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 160/335 (47%), Gaps = 25/335 (7%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP + TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPKLKTLL 73
Query: 94 SIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIG 152
S+GG N P R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGPERFSAIASKTQSRRTFIKSVP--PFLRTHGFDGLDLAWLYPG-RRDKRHLT 130
Query: 153 ILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYS 212
L KE +A EA+ + QL+L+A V+ ++ Y + I ++L+++ ++T +
Sbjct: 131 TLVKEMKAEFIREAQ--AGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFH 188
Query: 213 KPTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
W G H+ L+ N SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 189 G-AWRQTVGHHSPLFAGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSFTLAS 247
Query: 268 PEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
+ + +GA +GP + + G++ Y EI + + +G + V Y + G
Sbjct: 248 SKTD-VGAPVSGPGVPGRFTKEKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQ 302
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W +DD E+V+ K Y K ++L G VW + D +
Sbjct: 303 WVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|2PI6|A Chain A, Crystal Structure Of The Sheep Signalling Glycoprotein
(Sps-40) Complex With 2-Methyl-2-4-Pentanediol At 1.65a
Resolution Reveals Specific Binding Characteristics Of
Sps-40
Length = 361
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 160/335 (47%), Gaps = 25/335 (7%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP + TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYTFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPKLKTLL 73
Query: 94 SIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIG 152
S+GG N P R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGPERFSKIASKTQSRRTFIKSVP--PFLRTHGFDGLDLAWLYPG-RRDKRHLT 130
Query: 153 ILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYS 212
L KE +A EA+ + QL+L+A V+ ++ Y + I ++L+++ ++T +
Sbjct: 131 TLVKEMKAEFIREAQ--AGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFH 188
Query: 213 KPTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
W G H+ L+ N SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 189 G-AWRQTVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSFTLAS 247
Query: 268 PEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
+ + +GA +GP + + G++ Y EI + + +G + V Y + G
Sbjct: 248 SKTD-VGAPVSGPGIPGRFTKEKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQ 302
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W +DD E+V+ K Y K ++L G VW + D +
Sbjct: 303 WVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1XHG|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein From
Porcine (spp-40) At 2.89a Resolution
pdb|1XRV|A Chain A, Crystal Structure Of The Novel Secretory Signalling
Protein From Porcine (Spp-40) At 2.1a Resolution.
pdb|1ZBC|A Chain A, Crystal Structure Of The Porcine Signalling Protein
Liganded With The Peptide Trp-Pro-Trp (Wpw) At 2.3 A
Resolution
pdb|1ZB5|A Chain A, Recognition Of Peptide Ligands By Signalling Protein From
Porcine Mammary Gland (Spp-40): Crystal Structure Of The
Complex Of Spp-40 With A Peptide Trp-Pro-Trp At 2.45a
Resolution
Length = 361
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 163/335 (48%), Gaps = 25/335 (7%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP++ TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPNLKTLL 73
Query: 94 SIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIG 152
S+GG N P R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGPQRFSKIASKTQSRRTFIKSVP--PFLRTHGFDGLDLAWLYPG-RRDKRHLT 130
Query: 153 ILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYS 212
L KE +A EA+ + QL+L+A V+ ++ Y + I ++L+++ ++T +
Sbjct: 131 TLVKEMKAEFIREAQ--AGTEQLLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFH 188
Query: 213 KPTWTNFTGAHAALY----DPNS-VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVK 267
W G H+ L+ D +S SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 189 G-AWRQTVGHHSPLFRGQEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGKSFTLAS 247
Query: 268 PEDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKI 322
+ + +GA +GP + + G++ Y EI + ++ G + V Y + G
Sbjct: 248 SKTD-VGAPVSGPGIPGQFTKEKGILAYYEICDFLQ--GATTHRFRDQQ--VPYATKGNQ 302
Query: 323 WFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
W +DD E+V+ K Y K ++L G VW + D +
Sbjct: 303 WVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|2ESC|A Chain A, Crystal Structure Of A 40 Kda Protective Signalling
Protein From Bovine (Spc-40) At 2.1 A Resolution
Length = 361
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 159/334 (47%), Gaps = 23/334 (6%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP++ TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPNLKTLL 73
Query: 94 SIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIGI 153
S+GG N + R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGS-ERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGW-RDKRHLTT 131
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L KE +A EA+ + QL+L+A V ++ Y + I ++L+++ ++T +
Sbjct: 132 LVKEMKAEFVREAQ--AGTEQLLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHG 189
Query: 214 PTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVKP 268
W G H+ L+ NS SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 190 -GWRGTVGHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSYTLASS 248
Query: 269 EDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIW 323
+GA +GP + + G++ Y EI + + +G + V Y + G W
Sbjct: 249 STR-VGAPISGPGIPGQFTKEKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQW 303
Query: 324 FGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
+DD E+V+ K Y K ++L G VW + D +
Sbjct: 304 VAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1OWQ|A Chain A, Crystal Structure Of A 40 Kda Signalling Protein (Spc-40)
Secreted During Involution
Length = 361
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 23/334 (6%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP++ TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPNLKTLL 73
Query: 94 SIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIGI 153
S+GG N + R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNFGS-ERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLYPGW-RDKRHLTT 131
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L KE +A EA+ + QL+L+A V ++ Y + I ++L+++ ++T +
Sbjct: 132 LVKEMKAEFVREAQ--AGTEQLLLSAAVPAGKIAIDRGYDIAQISRHLDFISLLTYDFHG 189
Query: 214 PTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVKP 268
W G H+ L+ NS SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 190 -GWRGTVGHHSPLFRGNSDGSSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSYTLASS 248
Query: 269 EDNGIGAAATGPAL-----YDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIW 323
+ + +GA +GP + + G + Y EI + + +G + V Y + G W
Sbjct: 249 KTD-VGAPISGPGIPGQFTKEKGTLAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQW 303
Query: 324 FGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
+DD E+V+ K Y K ++L G VW + D +
Sbjct: 304 VAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1TFV|A Chain A, Crystal Structure Of A Buffalo Signaling Glycoprotein
(Spb-40) Secreted During Involution
pdb|2O9O|A Chain A, Crystal Structure Of The Buffalo Secretory Signalling
Glycoprotein At 2.8 A Resolution
pdb|2QF8|A Chain A, Crystal Structure Of The Complex Of Buffalo Secretory
Glycoprotein With Tetrasaccharide At 2.8a Resolution
Length = 361
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 159/334 (47%), Gaps = 23/334 (6%)
Query: 35 GDGFPISD-VNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLL 93
GDG D ++ L TH++ FA++++ E+ ++ + +T+K +NP++ TLL
Sbjct: 16 GDGSCFPDAIDPFLCTHVIYSFANISNN--EIDTWEWNDVTLYDTLNTLKNRNPNLKTLL 73
Query: 94 SIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNIGI 153
S+GG N + R +GF GLDL+W RDK ++
Sbjct: 74 SVGGWNYGS-QRFSKIASKTQSRRTFIKSVPPFLRTHGFDGLDLAWLWPGW-RDKRHLTT 131
Query: 154 LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSK 213
L KE +A EA+ + QL+L+A V ++ Y + I ++L+++ ++T +
Sbjct: 132 LVKEMKAEFVREAQ--AGTEQLLLSAAVTAGKIAIDRGYDIAQISRHLDFISLLTYDFHG 189
Query: 214 PTWTNFTGAHAALYDPNS-----VSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVKP 268
W G H+ L+ N SN +Y ++ + G A+KLV+ +P +G ++TL
Sbjct: 190 -AWRQTVGHHSPLFRGNEDASSRFSNADYAVSYMLRLGAPANKLVMGIPTFGRSYTLASS 248
Query: 269 EDNGIGAAATGPALYD-----DGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIW 323
+ + +GA +GP + G++ Y EI + + +G + V Y + G W
Sbjct: 249 KTD-VGAPISGPGIPGRFTKWKGILAYYEICDFL--HGATTHRFRDQQ--VPYATKGNQW 303
Query: 324 FGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
+DD E+V+ K Y K ++L G VW + D +
Sbjct: 304 VAYDDQESVKNKARYLKNRQLAGAMVWALDLDDF 337
>pdb|1E9L|A Chain A, The Crystal Structure Of Novel Mammalian Lectin Ym1
Suggests A Saccharide Binding Site
pdb|1VF8|A Chain A, The Crystal Structure Of Ym1 At 1.31 A Resolution
Length = 377
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 149/340 (43%), Gaps = 33/340 (9%)
Query: 38 FPISDVNFALFTHLMCGFADV--NSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSI 95
F +++ L THL+ FA + N TY D E + D KN + TLL+I
Sbjct: 20 FKPGNIDPCLCTHLIYAFAGMQNNEITYTHEQDLRDYEALNGLKD----KNTELKTLLAI 75
Query: 96 GG---GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW----NSANTSRDK 148
GG G P I+ R Y F GL+L W + + +DK
Sbjct: 76 GGWKFGPAP----FSAMVSTPQNRQIFIQSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDK 131
Query: 149 YNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMT 208
+ +L KE R A + E+ +L+LT+ A + Y + + Q L+++ VMT
Sbjct: 132 HLFSVLVKEMRKAFEEESVEKDI-PRLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMT 190
Query: 209 TGYSKPTWTNFTGAHAALY-DPNSVS-----NTEYGITEWIEEGLSADKLVLCLPFYGFA 262
P +TG ++ LY P + N + I+ W + G +++KL++ P YG
Sbjct: 191 YDLHDPK-DGYTGENSPLYKSPYDIGKSADLNVDSIISYWKDHGAASEKLIVGFPAYGHT 249
Query: 263 WTLVKPEDNGIGAA--ATGP-ALYDD--GLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYC 317
+ L P GIGA +TGP Y D GL+ Y E+ + V +++ V Y
Sbjct: 250 FILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLNEGATEV---WDAPQEVPYA 306
Query: 318 SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
G W G+D+V + ++K + K+ L G VW + D +
Sbjct: 307 YQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDF 346
>pdb|4AY1|A Chain A, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|B Chain B, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|C Chain C, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|D Chain D, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|E Chain E, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|F Chain F, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|G Chain G, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|H Chain H, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|I Chain I, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|J Chain J, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|K Chain K, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
pdb|4AY1|L Chain L, Human Ykl-39 Is A Pseudo-Chitinase With Retained
Chitooligosaccharide Binding Properties
Length = 365
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 149/338 (44%), Gaps = 34/338 (10%)
Query: 38 FPISDVNFALFTHLMCGFADVNSTTYELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGG 97
F +++ L +HL+ FA + + ++ + E +++K KNP + LLSIGG
Sbjct: 21 FTPENIDPFLCSHLIYSFASIENN--KVIIKDKSEVMLYQTINSLKTKNPKLKILLSIGG 78
Query: 98 ------GNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSRDKYNI 151
G +P I R + F GLD+SW + ++ +
Sbjct: 79 YLFGSKGFHP-------MVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPD-QKENTHF 130
Query: 152 GILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGY 211
+L E A + S++ +L+LTA V+ +Y V+ + + L+++++++ +
Sbjct: 131 TVLIHELAEAFQKDF-TKSTKERLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDF 189
Query: 212 SKPTWTN--FTGAHAALYD------PNSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAW 263
+W TG ++ L P+S N EY + WI +G+ ++K+V+ +P YG ++
Sbjct: 190 HG-SWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSF 248
Query: 264 TLVKPEDN----GIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVNYCSI 319
TL E G A GP G + Y EI +K ++ V Y
Sbjct: 249 TLASAETTVGAPASGPGAAGPITESSGFLAYYEICQFLK----GAKITRLQDQQVPYAVK 304
Query: 320 GKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHY 357
G W G+DDV+++ KV + K L G +W + D +
Sbjct: 305 GNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDF 342
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 433 LREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFE-EFKN 491
L+ +SL +++ A+D +N LG GG+G VYKG L DG ++AVK+L + TQG E +F+
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 492 EVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
EV + + H NL+R+ GFC+ E +L+Y YM
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 109
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 433 LREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFE-EFKN 491
L+ +SL +++ A+D S +N LG GG+G VYKG L DG ++AVK+L + QG E +F+
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 492 EVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
EV + + H NL+R+ GFC+ E +L+Y YM
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 117
>pdb|1ITX|A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans
Wl-12
Length = 419
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 131/323 (40%), Gaps = 43/323 (13%)
Query: 77 NFTDTVKIKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLD 136
N + +K NP++ T++S+GG N + R Y F G+D
Sbjct: 111 NQLNKLKQTNPNLKTIISVGGWTWSN--RFSDVAATAATREVFANSAVDFLRKYNFDGVD 168
Query: 137 LSWN-------SANTSR--DKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLS 187
L W N+ R DK N +L + R +D + + L + + + +
Sbjct: 169 LDWEYPVSGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGAS---AT 225
Query: 188 TAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAAL-YDPNSVS---------NTEY 237
AA + I ++W+++MT ++ W + +A L YDP + + N
Sbjct: 226 YAANTELAKIAAIVDWINIMTYDFNG-AWQKISAHNAPLNYDPAASAAGVPDANTFNVAA 284
Query: 238 GITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPA---LYDDGLVTYKEIK 294
G ++ G+ A KLVL +PFYG W NG TG + ++ G + +++
Sbjct: 285 GAQGHLDAGVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVGTWEAGSFDFYDLE 344
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEV 352
+ N R +N T V Y + K + +DD E+V K +Y K K L G WE+
Sbjct: 345 ANYINKNGYTR-YWNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWEL 403
Query: 353 SYDHYWMLSRAAAEEDNKNRQNK 375
S D NK QNK
Sbjct: 404 SGDR------------NKTLQNK 414
>pdb|1W9P|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9P|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Inhibitors Against Aspergillus
Fumigatus, Human And Bacterial Chitinasefra
pdb|1W9U|A Chain A, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9U|B Chain B, Specificity And Affnity Of Natural Product
Cyclopentapeptide Inhibitor Argadin Against Aspergillus
Fumigatus Chitinase
pdb|1W9V|A Chain A, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|1W9V|B Chain B, Specificity And Affinity Of Natural Product
Cyclopentapeptide Argifin Against Aspergillus Fumigatus
pdb|2A3A|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3A|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Theophylline
pdb|2A3B|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3B|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Caffeine
pdb|2A3C|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3C|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Pentoxifylline
pdb|2A3E|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2A3E|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Allosamidin
pdb|2IUZ|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|2IUZ|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With C2-Dicaffeine
pdb|3CH9|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CH9|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dimethylguanylurea
pdb|3CHC|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHC|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Monopeptide
pdb|3CHD|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHD|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Dipeptide
pdb|3CHE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tripeptide
pdb|3CHF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
pdb|3CHF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Chitinase B1 In
Complex With Tetrapeptide
Length = 433
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 43/342 (12%)
Query: 42 DVNFALFTHLMCGFADVNSTTYELSLSPS--DEEQF---SNFTDT-------------VK 83
D+ TH++ FA+V T E+ ++ S D E+ +++DT +K
Sbjct: 63 DLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLK 122
Query: 84 IKNPSITTLLSIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSA 142
+N ++ LLSIGG +PN+ +K+ + GF GLD+ W
Sbjct: 123 KQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFAKTA---VKLLQDLGFDGLDIDWEYP 179
Query: 143 NTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLN 202
+ + +L KE R A+D + N+ +LT P + D + Q L+
Sbjct: 180 ENDQQANDFVLLLKEVRTALDSYSAANAGGQHFLLTVASPAGPDKIKVLHLKD-MDQQLD 238
Query: 203 WVHVMTTGYSKPTWTNFTGAHAALYDPNSVS-----NTEYGITEWIEEGLSADKLVLCLP 257
+ ++M Y+ ++++ +G A +Y+ S NT+ + + G+ A+K+VL +P
Sbjct: 239 FWNLMAYDYAG-SFSSLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIVLGMP 297
Query: 258 FYGFAWTLV----KPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYV 313
YG ++ KP NG+G + +++G+ YK + G V+ +
Sbjct: 298 LYGRSFANTDGPGKPY-NGVGQGS-----WENGVWDYKALPQA----GATEHVLPDIMAS 347
Query: 314 VNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYD 355
+Y + K +D+ + +K Y K L G W+ S D
Sbjct: 348 YSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 389
>pdb|1WNO|A Chain A, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
pdb|1WNO|B Chain B, Crystal Structure Of A Native Chitinase From Aspergillus
Fumigatus Yj- 407
Length = 395
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 147/342 (42%), Gaps = 43/342 (12%)
Query: 42 DVNFALFTHLMCGFADVNSTTYELSLSPS--DEEQF---SNFTDT-------------VK 83
D+ TH++ FA+V T E+ ++ S D E+ +++DT +K
Sbjct: 25 DLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLK 84
Query: 84 IKNPSITTLLSIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSA 142
+N ++ LLSIGG +PN+ +K+ + GF GLD+ W
Sbjct: 85 KQNRNLKVLLSIGGWTYSPNFAPAASTDAGRKNFAKTA---VKLLQDLGFDGLDIDWEYP 141
Query: 143 NTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVDSIRQYLN 202
+ + +L +E R A+D + N+ +LT P + D + Q L+
Sbjct: 142 ENDQQANDFVLLLREVRTALDSYSAANAGGQHFLLTVASPAGPDKIKVLHLKD-MDQQLD 200
Query: 203 WVHVMTTGYSKPTWTNFTGAHAALYDPNSVS-----NTEYGITEWIEEGLSADKLVLCLP 257
+ ++M Y+ ++++ +G A +Y+ S NT+ + + G+ A+K+VL +P
Sbjct: 201 FWNLMAYDYAG-SFSSLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIVLGMP 259
Query: 258 FYGFAWTLV----KPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYV 313
YG ++ KP NG+G + +++G+ YK + G V+ +
Sbjct: 260 LYGRSFANTDGPGKPY-NGVGQGS-----WENGVWDYKALPQA----GATEHVLPDIMAS 309
Query: 314 VNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYD 355
+Y + K +D+ + +K Y K L G W+ S D
Sbjct: 310 YSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSD 351
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%)
Query: 438 LADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTA 497
L D+E AT+ + +G G +G VYKGVL DG +A+K+ + S+QG EEF+ E+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 498 KLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFG 535
+H +L+ ++GFC + E +LIY+YM +L L+G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%)
Query: 438 LADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTA 497
L D+E AT+ + +G G +G VYKGVL DG +A+K+ + S+QG EEF+ E+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 498 KLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFG 535
+H +L+ ++GFC + E +LIY+YM +L L+G
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG 128
>pdb|1LL6|A Chain A, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|B Chain B, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|C Chain C, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
pdb|1LL6|D Chain D, Structure Of The D169n Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 147/347 (42%), Gaps = 40/347 (11%)
Query: 35 GDGFPISDVNFALFTHLMCGFADVNSTTYELSLS----------PSD--EEQFSNFTDTV 82
G G D+ FTH++ FA++ + E+ LS P D +E +N +
Sbjct: 16 GRGHNPQDLKADQFTHILYAFANIRPSG-EVYLSDTWADTDKHYPGDKWDEPGNNVYGCI 74
Query: 83 K------IKNPSITTLLSIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGL 135
K N ++ TLLSIGG +PN+ +K+ + GF G+
Sbjct: 75 KQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTS---LKLMKDLGFDGI 131
Query: 136 DLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVD 195
D++W + + +L K R A+D + + + + +LT P +
Sbjct: 132 DINWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGP-QNYNKLKLA 190
Query: 196 SIRQYLNWVHVMTTGYSKPTWTNFTGAHAALY----DPNSVS-NTEYGITEWIEEGLSAD 250
+ +YL++ ++M +S +W +G + ++ P S +++ + ++I+ G+ A+
Sbjct: 191 EMDKYLDFWNLMAYDFSG-SWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPAN 249
Query: 251 KLVLCLPFYGFAWTLVKPEDNGIGAA--ATGPALYDDGLVTYKEIKNHIKNYGPNVRVMY 308
K+VL +P YG A+ +GIG + G +++G+ YK++ G V +
Sbjct: 250 KIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GAQVTELE 301
Query: 309 NSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYD 355
+ +Y + +D V+ K Y + + G WE S D
Sbjct: 302 DIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|1LL7|A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
pdb|1LL7|B Chain B, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Length = 392
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 40/347 (11%)
Query: 35 GDGFPISDVNFALFTHLMCGFADVNSTTYELSLS----------PSD--EEQFSNFTDTV 82
G G D+ FTH++ FA++ + E+ LS P D +E +N +
Sbjct: 16 GRGHNPQDLKADQFTHILYAFANIRPSG-EVYLSDTWADTDKHYPGDKWDEPGNNVYGCI 74
Query: 83 K------IKNPSITTLLSIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGL 135
K N ++ TLLSIGG +PN+ +K+ + GF G+
Sbjct: 75 KQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTS---LKLMKDLGFDGI 131
Query: 136 DLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVD 195
D+ W + + +L K R A+D + + + + +LT P +
Sbjct: 132 DIDWQYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGP-QNYNKLKLA 190
Query: 196 SIRQYLNWVHVMTTGYSKPTWTNFTGAHAALY----DPNSVS-NTEYGITEWIEEGLSAD 250
+ +YL++ ++M +S +W +G + ++ P S +++ + ++I+ G+ A+
Sbjct: 191 EMDKYLDFWNLMAYDFSG-SWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPAN 249
Query: 251 KLVLCLPFYGFAWTLVKPEDNGIGAA--ATGPALYDDGLVTYKEIKNHIKNYGPNVRVMY 308
K+VL +P YG A+ +GIG + G +++G+ YK++ G V +
Sbjct: 250 KIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GAQVTELE 301
Query: 309 NSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYD 355
+ +Y + +D V+ K Y + + G WE S D
Sbjct: 302 DIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|1D2K|A Chain A, C. Immitis Chitinase 1 At 2.2 Angstroms Resolution
pdb|1LL4|A Chain A, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|B Chain B, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|C Chain C, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
pdb|1LL4|D Chain D, Structure Of C. Immitis Chitinase 1 Complexed With
Allosamidin
Length = 392
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 146/347 (42%), Gaps = 40/347 (11%)
Query: 35 GDGFPISDVNFALFTHLMCGFADVNSTTYELSLS----------PSD--EEQFSNFTDTV 82
G G D+ FTH++ FA++ + E+ LS P D +E +N +
Sbjct: 16 GRGHNPQDLKADQFTHILYAFANIRPSG-EVYLSDTWADTDKHYPGDKWDEPGNNVYGCI 74
Query: 83 K------IKNPSITTLLSIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGL 135
K N ++ TLLSIGG +PN+ +K+ + GF G+
Sbjct: 75 KQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTS---LKLMKDLGFDGI 131
Query: 136 DLSWNSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLSTAAAYPVD 195
D+ W + + +L K R A+D + + + + +LT P +
Sbjct: 132 DIDWEYPEDEKQANDFVLLLKACREALDAYSAKHPNGKKFLLTIASPAGP-QNYNKLKLA 190
Query: 196 SIRQYLNWVHVMTTGYSKPTWTNFTGAHAALY----DPNSVS-NTEYGITEWIEEGLSAD 250
+ +YL++ ++M +S +W +G + ++ P S +++ + ++I+ G+ A+
Sbjct: 191 EMDKYLDFWNLMAYDFSG-SWDKVSGHMSNVFPSTTKPESTPFSSDKAVKDYIKAGVPAN 249
Query: 251 KLVLCLPFYGFAWTLVKPEDNGIGAA--ATGPALYDDGLVTYKEIKNHIKNYGPNVRVMY 308
K+VL +P YG A+ +GIG + G +++G+ YK++ G V +
Sbjct: 250 KIVLGMPLYGRAFAST----DGIGTSFNGVGGGSWENGVWDYKDMPQQ----GAQVTELE 301
Query: 309 NSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYD 355
+ +Y + +D V+ K Y + + G WE S D
Sbjct: 302 DIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSD 348
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 452 NKLGEGGYGPVYKGVLPDGQIIAVKKLSK----TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
NK+GEGG+G VYKG + + +AVKKL+ T+ + ++F E+ + AK QH NL+ +
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LGF D + L+Y YMP SL
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 452 NKLGEGGYGPVYKGVLPDGQIIAVKKLSK----TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
NK+GEGG+G VYKG + + +AVKKL+ T+ + ++F E+ + AK QH NL+ +
Sbjct: 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LGF D + L+Y YMP SL
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 452 NKLGEGGYGPVYKGVLPDGQIIAVKKLSK----TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
NK+GEGG+G VYKG + + +AVKKL+ T+ + ++F E+ + AK QH NL+ +
Sbjct: 31 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LGF D + L+Y YMP SL
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSL 111
>pdb|3G6L|A Chain A, The Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea
pdb|3G6M|A Chain A, Crystal Structure Of A Chitinase Crchi1 From The
Nematophagous Fungus Clonostachys Rosea In Complex With
A Potent Inhibitor Caffeine
Length = 406
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 21/282 (7%)
Query: 82 VKIKNPSITTLLSIGGGN-NPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWN 140
+K N S+ +LSIGG + N+ ++ + +GF G+D+ W
Sbjct: 98 LKKANRSLKIMLSIGGWTWSTNFPAAASTEATRATFAKTA---VEFMKDWGFDGIDVDWE 154
Query: 141 SANTSRDKYNIGILFKEWRAAVDLEARN--NSSQSQLILTAKVAHSPLSTAAAYPVDSIR 198
+ D N+ +L + R +D + N QL + A S + + S+
Sbjct: 155 YPASETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYNVLKLAQLGSV- 213
Query: 199 QYLNWVHVMTTGYSKPTWTNFTGAHAALY----DPNSVS-NTEYGITEWIEEGLSADKLV 253
L+ +++M Y+ +W + +G LY +P+S +T+ + +I G+ A K++
Sbjct: 214 --LDNINLMAYDYAG-SWDSVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKII 270
Query: 254 LCLPFYGFAWTLVKPEDNGIGAAATGPALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYV 313
L +P YG A V + G + G ++ G+ YK + G V +
Sbjct: 271 LGMPIYGRA--FVGTDGPGKPYSTIGEGSWESGIWDYKVLPKA----GATVITDSAAGAT 324
Query: 314 VNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYD 355
+Y S + +D + VR KVSYAK L G WE S D
Sbjct: 325 YSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASAD 366
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 452 NKLGEGGYGPVYKGVLPDGQIIAVKKLSK----TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
NK GEGG+G VYKG + + +AVKKL+ T+ + ++F E+ + AK QH NL+ +
Sbjct: 28 NKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LGF D + L+Y Y P SL
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSL 108
>pdb|1RD6|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a
pdb|1X6L|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a
pdb|1X6N|A Chain A, Crystal Structure Of S. Marcescens Chitinase A Mutant
W167a In Complex With Allosamidin
Length = 563
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 307 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG 366
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 367 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 423
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 424 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 483
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 484 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 540
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 541 IDADNGDILNSMNASLGN 558
>pdb|1JND|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
pdb|1JNE|A Chain A, Crystal Structure Of Imaginal Disc Growth Factor-2
Length = 420
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 157/382 (41%), Gaps = 67/382 (17%)
Query: 39 PISDVNFALFTHLMCGFADV---NSTTYELSLSPSD-EEQFSNFTDTVKIKNPSITTLLS 94
P ++ +HL+ G+A + N Y ++ + + QFS T ++K K P + LLS
Sbjct: 24 PDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVLLS 82
Query: 95 IGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIA----RLYGFQGLDLSWN-SANTSRDKY 149
+GG ++ + I+ A + YGF GLDL++ N R +
Sbjct: 83 VGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTYGFDGLDLAYQFPKNKPRKVH 142
Query: 150 -NIGI--------------------LFKEWRAAVDLEARNNSSQSQLILTAKVAHSPLST 188
++G+ L KE A+ + +++ +L+ V + +++
Sbjct: 143 GDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLPN-VNS 201
Query: 189 AAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAA-LYDPNSVS------NTEYGITE 241
+ + ++ +++V++ T + P ++A +Y P+ N ++ +
Sbjct: 202 TWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKDRLAHLNADFQVEY 261
Query: 242 WIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI----------GAAATGPALYDDGLVTYK 291
W+ +G ++K+ L + YG AW L K D+G+ G A G GL++Y
Sbjct: 262 WLSQGFPSNKINLGVATYGNAWKLTK--DSGLEGVPVVPETSGPAPEGFQSQKPGLLSYA 319
Query: 292 EIKNHIKN----------------YGPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVK 335
EI + N P R + V+ IW +DD ++ K
Sbjct: 320 EICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNK 379
Query: 336 VSYAKEKKLRGYYVWEVSYDHY 357
+YA+ K L G ++++SYD +
Sbjct: 380 AAYARVKNLGGVALFDLSYDDF 401
>pdb|2WLY|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitotrio-Thiazoline.
pdb|2WLZ|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitobio-Thiazoline.
pdb|2WM0|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitobio-Thiazoline Thioamide
Length = 548
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|2WK2|A Chain A, Chitinase A From Serratia Marcescens Atcc990 In Complex
With Chitotrio-Thiazoline Dithioamide
Length = 540
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSAETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLTQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|1CTN|A Chain A, Crystal Structure Of A Bacterial Chitinase At 2.3
Angstroms Resolution
Length = 540
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSTETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|1K9T|A Chain A, Chitinase A Complexed With Tetra-N-Acetylchitotriose
Length = 540
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 22/256 (8%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPV--DSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSNTEYGIT 240
+ A Y V +S+ + + + T +A + P++ T G+
Sbjct: 344 KDKIDKVA-YNVAQNSMDHIFLMSYAFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVN 402
Query: 241 EWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIKNH 296
+ +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 403 ALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIAGQ 462
Query: 297 IKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVS 353
+ + Y++T Y S G + FDD +V+ K Y +K+L G + WE+
Sbjct: 463 FMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWEID 519
Query: 354 YDHYWMLSRAAAEEDN 369
D+ +L+ A N
Sbjct: 520 ADNGDILNSMNASLGN 535
>pdb|1EIB|A Chain A, Crystal Structure Of Chitinase A Mutant D313a Complexed
With Octa-N- Acetylchitooctaose (Nag)8
Length = 540
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D++W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIAWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|1EHN|A Chain A, Crystal Structure Of Chitinase A Mutant E315q Complexed
With Octa-N- Acetylchitooctaose (Nag)8
Length = 540
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWQFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|1FFR|A Chain A, Crystal Structure Of Chitinase A Mutant Y390f Complexed
With Hexa-n- Acetylchitohexaose (nag)6
Length = 540
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSFDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|1EDQ|A Chain A, Crystal Structure Of Chitinase A From S. Marcescens At
1.55 Angstroms
pdb|1FFQ|A Chain A, Crystal Structure Of Chitinase A Complexed With
Allosamidin
Length = 540
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W N+G +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 GQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|3QOK|A Chain A, Crystal Structure Of Putative Chitinase Ii From Klebsiella
Pneumoniae
Length = 420
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 148/410 (36%), Gaps = 84/410 (20%)
Query: 23 AQTLIKVGYWD------SGDGFPISDVNFALFTHLMCGFA----DVNSTT---------- 62
AQ L VGY++ +G G I ++ THL F D T
Sbjct: 23 AQPLXSVGYFNGGGDVTAGPGGDIDKLDVRQITHLNYSFGLIYNDEKDETNAALKDPAHL 82
Query: 63 YELSLSPSDEEQFSNFTDTVKIKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXX 122
+E+ LSP + ++ +NP + LLS+GG +
Sbjct: 83 HEIWLSPKVQADLQKLP-ALRKQNPDLKVLLSVGGWGARGFSGAAATAESRAVFIRSAQ- 140
Query: 123 XIKIARLYGFQGLDLSWN---------SANTSRDKYNIGILFKEWRAAVDLEARNNSSQS 173
KI + YG G+DL W A+ D+ N L K R AV
Sbjct: 141 --KIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTALLKSLREAVG---------E 189
Query: 174 QLILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYD----P 229
Q ++T V + S + V ++ LN++++ T Y T + ++ LYD P
Sbjct: 190 QKLVTIAVGANAESPKSWVDVKAVAPVLNYINLXT--YDXAYGTQYFNSN--LYDSSHWP 245
Query: 230 NSVSNTEYG----ITEWIEEGLSADKLVLCLPFYG----------FAWTLVKPEDNGIGA 275
+ +Y + ++ GL + L + FYG WT ++N +
Sbjct: 246 TVAAADKYSADFVVNNYLAAGLKPSQXNLGIGFYGRVPKRAVEPGIDWTKADAQNNPVTQ 305
Query: 276 AATGPA-----------LYDDGLVTYKEIKNHIKNYGPNVRVM--YNSTYVVNYCSI--- 319
GP L D V Y +I + N P R ++ V + S+
Sbjct: 306 PYFGPQQIALFASLGYDLSKDTYVKYNDIVGKLLN-DPQKRFTEHWDDEAKVPWLSVQSA 364
Query: 320 -GKIWFG--FDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
GK F +++ +V +K Y K K L G WE D L+R AE
Sbjct: 365 EGKPLFALSYENPRSVAIKADYIKAKGLAGAXFWEYGADDQNQLARQLAE 414
>pdb|1NH6|A Chain A, Structure Of S. Marcescens Chitinase A, E315l, Complex
With Hexasaccharide
Length = 540
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 26/258 (10%)
Query: 132 FQGLDLSW-----NSAN----TSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAKVA 182
F G+D+ W AN + +D +L KE RA +D + + +L
Sbjct: 284 FDGVDIDWLFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAG 343
Query: 183 HSPLSTAAAYPVDSIRQYLNWVHVMT----TGYSKPTWTNFTGAHAALYDPNSVSNTEYG 238
+ A Y V + ++ + +M+ + + T +A + P++ T G
Sbjct: 344 KDKIDKVA-YNV--AQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNG 400
Query: 239 ITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGI--GAAATGP--ALYDDGLVTYKEIK 294
+ + +G+ K+V+ YG WT V N I ATGP +++G+V Y++I
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGPVKGTWENGIVDYRQIA 460
Query: 295 NHIKNYGPNVRVMYNSTYVVNYC---SIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWE 351
+ + + Y++T Y S G + FDD +V+ K Y +K+L G + WE
Sbjct: 461 SQFMS--GEWQYTYDATAEAPYVFKPSTGDL-ITFDDARSVQAKGKYVLDKQLGGLFSWE 517
Query: 352 VSYDHYWMLSRAAAEEDN 369
+ D+ +L+ A N
Sbjct: 518 IDADNGDILNSMNASLGN 535
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 453 KLGEGGYGPVY----KGVLP--DGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIR 506
+LGEG +G V+ +LP D ++AVK L + S ++F+ E L LQH +++R
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 507 VLGFCIDTQEHMLIYEYMPKRSLDYFL 533
G C + + ++++EYM L+ FL
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 453 KLGEGGYGPVY----KGVLP--DGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIR 506
+LGEG +G V+ +LP D ++AVK L + S ++F+ E L LQH +++R
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 507 VLGFCIDTQEHMLIYEYMPKRSLDYFL 533
G C + + ++++EYM L+ FL
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 453 KLGEGGYGPVY----KGVLP--DGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIR 506
+LGEG +G V+ +LP D ++AVK L + S ++F+ E L LQH +++R
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 507 VLGFCIDTQEHMLIYEYMPKRSLDYFL 533
G C + + ++++EYM L+ FL
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|3ARS|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure Of Mutant
W275g
pdb|3ART|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Dequalinium
pdb|3ARU|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Pentoxifylline
pdb|3AS0|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Sanguinarine
pdb|3AS1|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Chelerythrine
pdb|3AS2|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With Propentofylline
pdb|3AS3|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - W275g Mutant Complex
Structure With 2-(Imidazolin-
2-Yl)-5-Isothiocyanatobenzofuran
Length = 584
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 128/326 (39%), Gaps = 59/326 (18%)
Query: 82 VKIKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWN- 140
+K +NP + + SIGGG + +K + Y G+D+ W
Sbjct: 238 LKQRNPDLKIIPSIGGGTLSDPFYDFVDKKNRDTFVASVKKFLKTWKFY--DGVDIDWEF 295
Query: 141 -----SANTSRDKYNIG----ILFKEWRAAVD-LEARNNSSQSQLILTAKVAHSPLSTAA 190
+A D N G L +E R +D LEA + +L V + +
Sbjct: 296 PGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTY-ELTSAIGVGYDKIEDVD 354
Query: 191 AYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALY---------------DPNS---- 231
D++ QY++++ MT + W N G ALY D N
Sbjct: 355 Y--ADAV-QYMDYIFAMTYDFYG-GWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYK 410
Query: 232 --VSNTEYGITEWIEEGLSADKLVLCLPFYGFAW------TLVKPEDNGIGAA------A 277
+ GI + +G+ A+KLVL YG W TL P D G A +
Sbjct: 411 GPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGS 470
Query: 278 TGPALYDDGLVTYKEIKNHI---KNYGPN-VRVMYNSTYVVNYC---SIGKIWFGFDDVE 330
T +++DG++ YK IK+ + N G N Y++ + S G++ FDD
Sbjct: 471 TAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGEL-ITFDDHR 529
Query: 331 AVRVKVSYAKEKKLRGYYVWEVSYDH 356
+V K +YAK L G + WE+ D+
Sbjct: 530 SVLAKGNYAKSLGLAGLFSWEIDADN 555
>pdb|1OGB|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGB|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n
pdb|1OGG|A Chain A, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
pdb|1OGG|B Chain B, Chitinase B From Serratia Marcescens Mutant D142n In
Complex With Inhibitor Allosamidin
Length = 499
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 151/385 (39%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+D++W +
Sbjct: 91 MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQAAE 150
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 151 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 208
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 209 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 266
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 267 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 326
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 327 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 384
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 385 FKYKAKYIKQQQLGGVMFWHLGQDN 409
>pdb|1UR9|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR9|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
Length = 499
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 151/385 (39%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+D++W +
Sbjct: 91 MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDINWEYPQAAE 150
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 151 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 208
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 209 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 266
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 267 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 326
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 327 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 384
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 385 FKYKAKYIKQQQLGGVMFWHLGQDN 409
>pdb|1E6N|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
pdb|1E6P|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6P|B Chain B, Chitinase B From Serratia Marcescens Inactive Mutant E144q
pdb|1E6N|A Chain A, Chitinase B From Serratia Marcescens Inactive Mutant E144q
In Complex With N-Acetylglucosamine-Pentamer
Length = 499
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+D+ W +
Sbjct: 91 MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWQYPQAAE 150
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 151 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 208
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 209 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 266
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 267 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 326
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 327 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 384
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 385 FKYKAKYIKQQQLGGVMFWHLGQDN 409
>pdb|1H0G|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0G|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argadin From Clonostachys
pdb|1H0I|A Chain A, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
pdb|1H0I|B Chain B, Complex Of A Chitinase With The Natural Product
Cyclopentapeptide Argifin From Gliocladium
Length = 499
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+D+ W +
Sbjct: 91 MFSIGGWYYSNDLGVSHANYVNAVKTPASRTKFAQSCVRIMKDYGFDGVDIDWEYPQAAE 150
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 151 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 208
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 209 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 266
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 267 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 326
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 327 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 384
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 385 FKYKAKYIKQQQLGGVMFWHLGQDN 409
>pdb|1E15|A Chain A, Chitinase B From Serratia Marcescens
pdb|1E15|B Chain B, Chitinase B From Serratia Marcescens
pdb|1E6R|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1E6R|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Inhibitor Allosamidin
pdb|1GPF|A Chain A, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1GPF|B Chain B, Chitinase B From Serratia Marcescens In Complex With
Inhibitor Psammaplin
pdb|1UR8|A Chain A, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1UR8|B Chain B, Interactions Of A Family 18 Chitinase With The Designed
Inhibitor Hm508, And Its Degradation Product,
Chitobiono-Delta-Lactone
pdb|1W1P|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1P|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(Gly-L-Pro) At
2.1 A Resolution
pdb|1W1T|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1T|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(his-l-pro) At
1.9 A Resolution
pdb|1W1V|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1V|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(L-Arg-L-Pro)
At 1.85 A Resolution
pdb|1W1Y|A Chain A, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1W1Y|B Chain B, Crystal Structure Of S. Marcescens Chitinase B In Complex
With The Cyclic Dipeptide Inhibitor Cyclo-(l-tyr-l-pro)
At 1.85 A Resolution
pdb|1O6I|A Chain A, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4.
pdb|1O6I|B Chain B, Chitinase B From Serratia Marcescens Complexed With The
Catalytic Intermediate Mimic Cyclic Dipeptide Ci4
Length = 499
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+D+ W +
Sbjct: 91 MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQAAE 150
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 151 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 208
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 209 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 266
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 267 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 326
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 327 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 384
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 385 FKYKAKYIKQQQLGGVMFWHLGQDN 409
>pdb|1E6Z|A Chain A, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
pdb|1E6Z|B Chain B, Chitinase B From Serratia Marcescens Wildtype In Complex
With Catalytic Intermediate
Length = 498
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 30 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 89
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+D+ W +
Sbjct: 90 MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVDIDWEYPQAAE 149
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 150 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 207
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 208 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 265
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 266 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 325
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 326 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 383
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 384 FKYKAKYIKQQQLGGVMFWHLGQDN 408
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLT 496
S+ E +++++KLG G YG VY GV + K K T EEF E +
Sbjct: 23 SMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 82
Query: 497 AKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRS-LDYF 532
+++H NL+++LG C ++ EYMP + LDY
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL 119
>pdb|1GOI|A Chain A, Crystal Structure Of The D140n Mutant Of Chitinase B From
Serratia Marcescens At 1.45 A Resolution
pdb|1GOI|B Chain B, Crystal Structure Of The D140n Mutant Of Chitinase B From
Serratia Marcescens At 1.45 A Resolution
Length = 499
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 150/385 (38%), Gaps = 72/385 (18%)
Query: 38 FPISDVNFA---LFTHLMCGFADVNST---TYELSLSPSDEEQFSNFTDTVKIKNPSITT 91
FP+S++ A TH+ F D+NS ++ + + + N +K NPS+
Sbjct: 31 FPVSNITPAKAKQLTHINFSFLDINSNLECAWDPATNDAKARDVVNRLTALKAHNPSLRI 90
Query: 92 LLSIGGGNNPN-----YXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWNSANTSR 146
+ SIGG N + ++I + YGF G+++ W +
Sbjct: 91 MFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDWEYPQAAE 150
Query: 147 DKYNIGILFKEWRAAVDLEARNNSSQS---QLILTAKVAHSPLSTAAAYPVDSIRQYLNW 203
I L +E R ++ + + Q+ QL + LS + + I L++
Sbjct: 151 VDGFIAAL-QEIRTLLNQQTITDGRQALPYQLTIAGAGGAFFLSRYYS-KLAQIVAPLDY 208
Query: 204 VHVMTTGYSKPTWTNFTGAHAALYDP-------NSVSNTEYGITEWIE------------ 244
+++MT + P W T AAL+ N++ G + W E
Sbjct: 209 INLMTYDLAGP-WEKVTNHQAALFGDAAGPTFYNALREANLGWS-WEELTRAFPSPFSLT 266
Query: 245 -----------EGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL----------- 282
EG+ + K+V+ +PFYG A+ V + G ++ + P
Sbjct: 267 VDAAVQQHLMMEGVPSAKIVMGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLV 326
Query: 283 --------YDDGLVTYKEIKNHIK-NYGPNVRVMYNSTYVVNYC--SIGKIWFGFDDVEA 331
D + +Y++++ ++ NYG + ++N Y + ++ +DD E+
Sbjct: 327 GCEECVRDKDPRIASYRQLEQMLQGNYG--YQRLWNDKTKTPYLYHAQNGLFVTYDDAES 384
Query: 332 VRVKVSYAKEKKLRGYYVWEVSYDH 356
+ K Y K+++L G W + D+
Sbjct: 385 FKYKAKYIKQQQLGGVMFWHLGQDN 409
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEF 489
DP Y ++E TD +++++KLG G YG VY+GV + K K T EEF
Sbjct: 4 DPSSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
E + +++H NL+++LG C +I E+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFM 96
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEF 489
DP Y ++E TD +++++KLG G YG VY+GV + K K T EEF
Sbjct: 4 DPSSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
E + +++H NL+++LG C +I E+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEF 489
DP Y ++E TD +++++KLG G YG VY+GV + K K T EEF
Sbjct: 4 DPSSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
E + +++H NL+++LG C +I E+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLT 496
SL E +++++KLG G YG VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 497 AKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
+++H NL+++LG C +I E+M
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFM 89
>pdb|3B8S|A Chain A, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3B8S|B Chain B, Crystal Structure Of Wild-Type Chitinase A From Vibrio
Harveyi
pdb|3ARO|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Apo Structure
pdb|3ARP|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Dequalinium
pdb|3ARQ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Idarubicin
pdb|3ARR|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Pentoxifylline
pdb|3ARV|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Sanguinarine
pdb|3ARW|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Chelerythrine
pdb|3ARX|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
Propentofylline
pdb|3ARY|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
pdb|3ARZ|A Chain A, Crystal Structure Analysis Of Chitinase A From Vibrio
Harveyi With Novel Inhibitors - Complex Structure With
2-(Imidazolin-2-Yl)-5- Isothiocyanatobenzofuran
Length = 584
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 127/327 (38%), Gaps = 61/327 (18%)
Query: 82 VKIKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSWN- 140
+K +NP + + SIGG + +K + Y G+D+ W
Sbjct: 238 LKQRNPDLKIIPSIGGWTLSDPFYDFVDKKNRDTFVASVKKFLKTWKFY--DGVDIDWEF 295
Query: 141 -----SANTSRDKYNIG----ILFKEWRAAVD-LEARNNSSQSQLILTAKVAHSPLSTAA 190
+A D N G L +E R +D LEA + +L V + +
Sbjct: 296 PGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTY-ELTSAIGVGYDKIEDVD 354
Query: 191 AYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALY---------------DPNS---- 231
D++ QY++++ MT + W N G ALY D N
Sbjct: 355 Y--ADAV-QYMDYIFAMTYDFYG-GWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYK 410
Query: 232 --VSNTEYGITEWIEEGLSADKLVLCLPFYGFAW------TLVKPEDNGIGAA------A 277
+ GI + +G+ A+KLVL YG W TL P D G A +
Sbjct: 411 GPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGS 470
Query: 278 TGPALYDDGLVTYKEIKNHI---KNYGPN-----VRVMYNSTYVVNYCSIGKIWFGFDDV 329
T +++DG++ YK IK+ + N G N + +V N S G++ FDD
Sbjct: 471 TAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNR-STGEL-ITFDDH 528
Query: 330 EAVRVKVSYAKEKKLRGYYVWEVSYDH 356
+V K +YAK L G + WE+ D+
Sbjct: 529 RSVLAKGNYAKSLGLAGLFSWEIDADN 555
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEF 489
DP Y ++E TD +++++KLG G YG VY+GV + K K T EEF
Sbjct: 4 DPSSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
E + +++H NL+++LG C +I E+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEF 489
DP Y ++E TD +++++KLG G YG VY+GV + K K T EEF
Sbjct: 4 DPSSPNYDKWEMER-TD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 61
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
E + +++H NL+++LG C +I E+M
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 96
>pdb|3B9A|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Hexasaccharide
pdb|3B9D|A Chain A, Crystal Structure Of Vibrio Harveyi Chitinase A Complexed
With Pentasaccharide
pdb|3B9E|A Chain A, Crystal Structure Of Inactive Mutant E315m Chitinase A
From Vibrio Harveyi
Length = 584
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 127/327 (38%), Gaps = 61/327 (18%)
Query: 82 VKIKNPSITTLLSIGGGNNPNYXXXXXXXXXXXXXXXXXXXXIKIARLYGFQGLDLSW-- 139
+K +NP + + SIGG + +K + Y G+D+ W
Sbjct: 238 LKQRNPDLKIIPSIGGWTLSDPFYDFVDKKNRDTFVASVKKFLKTWKFY--DGVDIDWMF 295
Query: 140 ----NSANTSRDKYNIG----ILFKEWRAAVD-LEARNNSSQSQLILTAKVAHSPLSTAA 190
+A D N G L +E R +D LEA + +L V + +
Sbjct: 296 PGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTY-ELTSAIGVGYDKIEDVD 354
Query: 191 AYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALY---------------DPNS---- 231
D++ QY++++ MT + W N G ALY D N
Sbjct: 355 Y--ADAV-QYMDYIFAMTYDFYG-GWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYK 410
Query: 232 --VSNTEYGITEWIEEGLSADKLVLCLPFYGFAW------TLVKPEDNGIGAA------A 277
+ GI + +G+ A+KLVL YG W TL P D G A +
Sbjct: 411 GPAYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGS 470
Query: 278 TGPALYDDGLVTYKEIKNHI---KNYGPN-----VRVMYNSTYVVNYCSIGKIWFGFDDV 329
T +++DG++ YK IK+ + N G N + +V N S G++ FDD
Sbjct: 471 TAQGVWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNR-STGEL-ITFDDH 528
Query: 330 EAVRVKVSYAKEKKLRGYYVWEVSYDH 356
+V K +YAK L G + WE+ D+
Sbjct: 529 RSVLAKGNYAKSLGLAGLFSWEIDADN 555
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLT 496
SL E +++++KLG G YG VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 497 AKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
+++H NL+++LG C +I E+M
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFM 89
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 222 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 281
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 282 LGVCTREPPFYIITEFM 298
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 19 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 78
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 79 LGVCTREPPFYIITEFM 95
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 75 LGVCTREPPFYIITEFM 91
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 75 LGVCTREPPFYIITEFM 91
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 75 LGVCTREPPFYIIIEFM 91
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 76 LGVCTREPPFYIIIEFM 92
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 75 LGVCTREPPFYIIIEFM 91
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 75 LGVCTREPPFYIITEFM 91
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 77 LGVCTREPPFYIITEFM 93
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 16 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 75
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 76 LGVCTREPPFYIITEFM 92
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 77 LGVCTREPPFYIITEFM 93
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 219 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 278
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 279 LGVCTREPPFYIITEFM 295
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 261 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 320
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 321 LGVCTREPPFYIITEFM 337
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 74
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 75 LGVCTREPPFYIITEFM 91
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 17 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 76
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 77 LGVCTREPPFYIITEFM 93
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
+++++KLG G YG VY+GV + K K T EEF E + +++H NL+++
Sbjct: 28 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 87
Query: 508 LGFCIDTQEHMLIYEYM 524
LG C +I E+M
Sbjct: 88 LGVCTREPPFYIITEFM 104
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQG-- 485
++ L +I + R E LGE +G VYKG L Q +A+K L K +G
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPL 72
Query: 486 FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
EEF++E ML A+LQH N++ +LG Q +I+ Y L FL
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 452 NKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQG--FEEFKNEVMLTAKLQHLN 503
+LGE +G VYKG L Q +A+K L K +G EEF++E ML A+LQH N
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 504 LIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
++ +LG Q +I+ Y L FL
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLT 496
SL E +++++KLG G +G VY+GV + K K T EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 497 AKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
+++H NL+++LG C +I E+M
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFM 89
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 448 LSIENKLGEGGYGPVYKG----VLP--DGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
+ ++ +LGEG +G V+ + P D ++AVK L S ++F E L LQH
Sbjct: 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH 74
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
++++ G C++ ++++EYM L+ FL
Sbjct: 75 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 448 LSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
+ ++ +LGEG +G V+ D ++AVK L + ++F+ E L LQH
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 76
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
++++ G C D ++++EYM L+ FL
Sbjct: 77 EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|1KFW|A Chain A, Structure Of Catalytic Domain Of Psychrophilic Chitinase B
From Arthrobacter Tad20
Length = 435
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 97/247 (39%), Gaps = 34/247 (13%)
Query: 132 FQGLDLSW-----------NSANTSRDKYNIGILFKEWRAAVDLEARNNSSQSQLILTAK 180
F G+D+ W N +T D+ N L E+R +D A +++ + +L+A
Sbjct: 175 FDGIDIDWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLD--AYGSTNNKKYVLSAF 232
Query: 181 VAHSPLSTAAAYPVDSIR-QYLNWVHVMT---TGYSKPTWTNFTGAHAALYD-------P 229
+ +P A D + L++ + G PT TG A LYD P
Sbjct: 233 LPANPADIDAGGWDDPANFKSLDFGSIQGYDLHGAWNPT---LTGHQANLYDDPADPRAP 289
Query: 230 NSVSNTEYGITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPALYDDGLVT 289
+ + + + +++ G+ +L L L YG WT K A P Y+
Sbjct: 290 SKKFSADKAVKKYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPWGPATDGAPGTYETANED 349
Query: 290 YKEIKNHIKNYGPNVRVMYNSTYVVNYCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYV 349
Y ++K ++ Y++ + G W+ +D++ + K Y K L G
Sbjct: 350 YDKLKTLGTDH-------YDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMW 402
Query: 350 WEVSYDH 356
WE+S D
Sbjct: 403 WELSGDR 409
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 14/109 (12%)
Query: 435 EYSLADIEAATDRLSIENKLGEGGYGPVYK----GVLP--DGQIIAVKKLSKTSTQGFE- 487
EY +IE D +GEG +G V++ G+LP ++AVK L + ++ +
Sbjct: 43 EYPRNNIEYVRD-------IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA 95
Query: 488 EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
+F+ E L A+ + N++++LG C + L++EYM L+ FL M
Sbjct: 96 DFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSM 144
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 15/103 (14%)
Query: 431 PDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL-PDGQIIAVKKLSKTSTQG---- 485
P R +LAD E + E ++G+GG+G V+KG L D ++A+K L ++G
Sbjct: 9 PKSRLPTLADNE-----IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 486 ---FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
F+EF+ EV + + L H N++++ G + ++ E++P
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 15/103 (14%)
Query: 431 PDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL-PDGQIIAVKKLSKTSTQG---- 485
P R +LAD E + E ++G+GG+G V+KG L D ++A+K L ++G
Sbjct: 9 PKSRLPTLADNE-----IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 486 ---FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
F+EF+ EV + + L H N++++ G + ++ E++P
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 56/103 (54%), Gaps = 15/103 (14%)
Query: 431 PDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL-PDGQIIAVKKLSKTSTQG---- 485
P R +LAD E + E ++G+GG+G V+KG L D ++A+K L ++G
Sbjct: 9 PKSRLPTLADNE-----IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 486 ---FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
F+EF+ EV + + L H N++++ G + ++ E++P
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVP 104
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQII----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ + A+K L++T+ + EF +E ++ A + H +L+R+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LG C+ + L+ + MP L
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCL 103
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQII----AVKKLSKTS-TQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ + A+K L++T+ + EF +E ++ A + H +L+R+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LG C+ L+ + MP L
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCL 126
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 76
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 77
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 72
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 78
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 102
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 425 DFNRTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQ 484
D NR R S D E ++++ ++G G +G VYKG + + ++ + Q
Sbjct: 7 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 66
Query: 485 GFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQ 515
+ FKNEV + K +H+N++ +G+ Q
Sbjct: 67 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ 97
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI EY+P SL +L
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 425 DFNRTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQ 484
D NR R S D E ++++ ++G G +G VYKG + + ++ + Q
Sbjct: 15 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 485 GFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQ 515
+ FKNEV + K +H+N++ +G+ Q
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ 105
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 425 DFNRTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQ 484
D NR R S D E ++++ ++G G +G VYKG + + ++ + Q
Sbjct: 15 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 74
Query: 485 GFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQ 515
+ FKNEV + K +H+N++ +G+ Q
Sbjct: 75 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ 105
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 425 DFNRTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQ 484
D NR R S D E ++++ ++G G +G VYKG + + ++ + Q
Sbjct: 14 DRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQ 73
Query: 485 GFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQ 515
+ FKNEV + K +H+N++ +G+ Q
Sbjct: 74 QLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ 104
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +KL H N++R +G + + ++ E M L FL
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +KL H N++R +G + + ++ E M L FL
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 448 LSIENKLGEGGYGPVYK---GVLPD--GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
L +LG+G +G V L D G+++AVKKL ++ + +F+ E+ + LQH
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 503 NLIRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
N+++ G C LI E++P SL +L
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL 107
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 321
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 322 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 354
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + + + +LG G +G V+ G + +AVK L K T + F E L LQH
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 67
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
L+R+ + +I EYM K SL FL
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFL 99
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 62
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 63 EKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFLKG 95
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 65
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 66 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 98
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 61
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 62 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 94
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 63
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 64 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 96
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKG 105
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 238
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKG 271
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKG 105
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKG 105
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + + + KLG G +G V+ G + +AVK L K T + F E L LQH
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQH 66
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
L+R+ + +I E+M K SL FL
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL 98
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVYKGVLP--DGQI--IAVK--KLSKTSTQGFEEFK 490
L D+ + L + LGEG +G V +G L DG +AVK KL +S + EEF
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 491 NEVMLTAKLQHLNLIRVLGFCIDTQEH-----MLIYEYMPKRSLDYFLF 534
+E H N+IR+LG CI+ M+I +M L +L
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLL 133
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKG 102
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 116
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 139
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 125
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 124
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 69
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKG 102
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 131
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 QR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 QR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 Q-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 QR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 Q-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 Q-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 89 Q-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 141
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 28 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 86
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ EYM SLD FL
Sbjct: 87 QR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 448 LSIENKLGEGGYGPVYKGVLP----DGQIIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHL 502
+ IE +G G +G V +G L +A+K L T+ EF +E + + +H
Sbjct: 16 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 75
Query: 503 NLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+IR+ G ++ M++ E+M +LD FL
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFL 106
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 142
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 448 LSIENKLGEGGYGPVYKGVLP----DGQIIAVKKLSKTSTQ-GFEEFKNEVMLTAKLQHL 502
+ IE +G G +G V +G L +A+K L T+ EF +E + + +H
Sbjct: 18 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 77
Query: 503 NLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+IR+ G ++ M++ E+M +LD FL
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFL 108
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQGFE-E 488
S++D+ E +++ LG G +G VY+G + P +AVK L + ++ E +
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 106
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 151
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 448 LSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTSTQGFEEFKNEVMLTAKLQH 501
+SI+ +G G +G V G L P + I+V K+ T Q +F E + + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 76
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+IR+ G ++ M++ EYM SLD FL
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + K++H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 105
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 448 LSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTSTQGFEEFKNEVMLTAKLQH 501
+SI+ +G G +G V G L P + I+V K+ T Q +F E + + H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 93
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+IR+ G ++ M++ EYM SLD FL
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
+IEA+ LS ++G G +G VYKG + + K+ + + F+ F+NEV + K
Sbjct: 32 EIEASEVMLS--TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 500 QHLNLIRVLGF 510
+H+N++ +G+
Sbjct: 90 RHVNILLFMGY 100
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 62 RHVNILLFMGYSTKPQ 77
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 437 SLADI-EAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKT-STQGFEE 488
S++D+ E +++ LG G +G VY+G + P +AVK L + S Q +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 489 FKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
F E ++ +K H N++R +G + + ++ E M L FL
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 139
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKL-----SKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G V+KGV +P+G+ I + K+ Q F+ + ++ L H +++R+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LG C + L+ +Y+P SL
Sbjct: 81 LGLCPGSSLQ-LVTQYLPLGSL 101
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 62 RHVNILLFMGYSTKPQ 77
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 64 RHVNILLFMGYSTKPQ 79
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 67 RHVNILLFMGYSTKPQ 82
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 67 RHVNILLFMGYSTKPQ 82
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKL-----SKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G V+KGV +P+G+ I + K+ Q F+ + ++ L H +++R+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 508 LGFCIDTQEHMLIYEYMPKRSL 529
LG C + L+ +Y+P SL
Sbjct: 99 LGLCPGSSLQ-LVTQYLPLGSL 119
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLP-DGQ---IIAVKKLSKTSTQ-GFEEFKNEVM 494
+IEA+ R+ IE +G G G V G L GQ +A+K L T+ +F +E
Sbjct: 45 EIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + H N+IR+ G + M++ EYM SLD FL
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLP-DGQ---IIAVKKLSKTSTQ-GFEEFKNEVM 494
+IEA+ R+ IE +G G G V G L GQ +A+K L T+ +F +E
Sbjct: 45 EIEAS--RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEAS 102
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + H N+IR+ G + M++ EYM SLD FL
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL 141
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K L FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKG 105
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K E F E + KL+H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRH 239
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K SL FL G
Sbjct: 240 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKG 272
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 66 RHVNILLFMGYSTKPQ 81
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ ++G G +G V+ G + +A+K + + E+F E + KL H L+++
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 508 LGFCIDTQEHMLIYEYMPKRSL-DYF-----------LFGMCL 538
G C++ L++E+M L DY L GMCL
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG+G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFLFG 535
L+++ + + ++E + ++ EYM K L FL G
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKG 105
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ ++G G +G V+ G + +A+K + + E+F E + KL H L+++
Sbjct: 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 508 LGFCIDTQEHMLIYEYMPKRSL-DYF-----------LFGMCL 538
G C++ L++E+M L DY L GMCL
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 113
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 62 RHVNILLFMGYSTAPQ 77
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 78 RHVNILLFMGYSTKPQ 93
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 426 FNRTDPD--LREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQ--IIAVKKLS 479
F DP+ +RE++ +I+A+ + IE +G G +G V G L P + +A+K L
Sbjct: 10 FTFEDPNQAVREFA-KEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 480 KTST-QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
T + +F +E + + H N+I + G + M+I EYM SLD FL
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 121
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ ++G G +G V+ G + +A+K + + E+F E + KL H L+++
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 508 LGFCIDTQEHMLIYEYMPKRSL-DYF-----------LFGMCL 538
G C++ L++E+M L DY L GMCL
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 108
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ ++G G +G V+ G + +A+K + + E+F E + KL H L+++
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 508 LGFCIDTQEHMLIYEYMPKRSL-DYF-----------LFGMCL 538
G C++ L++E+M L DY L GMCL
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 110
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVLPDGQ-----IIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHLNLIRV 507
+G G +G VYKG+L +A+K L T+ +F E + + H N+IR+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFL 533
G + M+I EYM +LD FL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL 137
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 87 LGICL-TSTVQLIMQLMP 103
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 85 LGICL-TSTVQLIMQLMP 101
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 84 LGICL-TSTVQLIMQLMP 100
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ ++G G +G V+ G + +A+K + K + ++F E + KL H L+++
Sbjct: 29 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 508 LGFCIDTQEHMLIYEYMPKRSL-DYF-----------LFGMCL 538
G C++ L++E+M L DY L GMCL
Sbjct: 88 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL 130
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 85 LGICL-TSTVQLIMQLMP 101
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 85 LGICL-TSTVQLIMQLMP 101
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 87 LGICL-TSTVQLIMQLMP 103
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 84 LGICL-TSTVQLIMQLMP 100
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 86 LGICL-TSTVQLIMQLMP 102
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 83 LGICL-TSTVQLIMQLMP 99
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKL 499
D E ++++ ++G G +G VYKG + + ++ + Q + FKNEV + K
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 500 QHLNLIRVLGFCIDTQ 515
+H+N++ +G+ Q
Sbjct: 78 RHVNILLFMGYSTAPQ 93
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 77 LGICL-TSTVQLITQLMP 93
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 436 YSLADI------EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTS 482
+S AD+ E A +++++ +LG+G +G VY+GV P+ + +A+K +++ +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAA 61
Query: 483 TQGFE-EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ EF NE + + +++R+LG Q ++I E M + L +L
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 436 YSLADI------EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTS 482
+S AD+ E A +++++ +LG+G +G VY+GV P+ + +A+K +++ +
Sbjct: 31 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAA 89
Query: 483 TQGFE-EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ EF NE + + +++R+LG Q ++I E M + L +L
Sbjct: 90 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 141
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D+ LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP 91
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 85 LGICL-TSTVQLITQLMP 101
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 90 LGICL-TSTVQLITQLMP 106
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 436 YSLADI------EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTS 482
+S AD+ E A +++++ +LG+G +G VY+GV P+ + +A+K +++ +
Sbjct: 3 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAA 61
Query: 483 TQGFE-EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ EF NE + + +++R+LG Q ++I E M + L +L
Sbjct: 62 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 113
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 436 YSLADI------EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTS 482
+S AD+ E A +++++ +LG+G +G VY+GV P+ + +A+K +++ +
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAA 67
Query: 483 TQGFE-EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ EF NE + + +++R+LG Q ++I E M + L +L
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 85 LGICL-TSTVQLITQLMP 101
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 89 LGICL-TSTVQLITQLMP 105
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 93 LGICL-TSTVQLITQLMP 109
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 90 LGICL-TSTVQLITQLMP 106
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 83 LGICL-TSTVQLITQLMP 99
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 83 LGICL-TSTVQLITQLMP 99
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 86 LGICL-TSTVQLITQLMP 102
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 86 LGICL-TSTVQLITQLMP 102
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 80 LGICL-TSTVQLITQLMP 96
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 83 LGICL-TSTVQLITQLMP 99
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 59/112 (52%), Gaps = 15/112 (13%)
Query: 436 YSLADI------EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTS 482
+S AD+ E A +++++ +LG+G +G VY+GV P+ + +A+K +++ +
Sbjct: 9 FSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAA 67
Query: 483 TQGFE-EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ EF NE + + +++R+LG Q ++I E M + L +L
Sbjct: 68 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 108 LGICL-TSTVQLITQLMP 124
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 86 LGICL-TSTVQLITQLMP 102
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLA-DIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQ--IIAVKKLSKTSTQ 484
DP+ + A +IEA+ ++IE +G G +G V G L P + +A+K L T+
Sbjct: 7 DPNQAVHEFAKEIEASC--ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE 64
Query: 485 G-FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+F E + + H N+I + G ++ M++ EYM SLD FL
Sbjct: 65 KQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL 114
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 83 LGICL-TSTVQLITQLMP 99
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 98
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTS----TQGFEEFKNEVMLTAKLQHLN 503
L++E +G GG+G VY+ G +AVK +Q E + E L A L+H N
Sbjct: 9 LTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 504 LIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFG 535
+I + G C+ L+ E+ L+ L G
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSG 99
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 431 PDL--REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKL--SKTSTQG 485
PD+ R +++ D E I LG+G +G VY I+A+K L S+ +G
Sbjct: 13 PDILTRHFTIDDFE-------IGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG 65
Query: 486 FE-EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMC 537
E + + E+ + A L H N++R+ + D + LI EY P+ L L C
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC 118
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 98
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 68
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 69 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 99
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 69
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 70 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 100
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 72
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 73 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 103
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 98
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 74 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 104
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 63
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 64 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 94
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 8 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPK 526
+ EV + + L+H N++R+ G+ D LI EY P+
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPR 97
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 76
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 77 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 107
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 77
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 78 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 108
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 8 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPK 526
+ EV + + L+H N++R+ G+ D LI EY P+
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPR 97
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 62
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 63 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 93
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 69
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 70 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 109
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 75
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 76 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 106
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +AVK L K + + F E L +LQH
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 74 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 104
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 70
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 71 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 110
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 433 LREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQ--IIAVKKLSKTST-QGFE 487
+RE++ +I+A+ + IE +G G +G V G L P + +A+K L T +
Sbjct: 4 VREFA-KEIDASC--IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 60
Query: 488 EFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+F +E + + H N+I + G + M+I EYM SLD FL
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL 106
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D + I LG+G +G VY + I+A+K L KT + G E +
Sbjct: 7 RQWTLEDFD-------IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL 59
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D + I LG+G +G VY + I+A+K L KT + G E +
Sbjct: 7 RQWTLEDFD-------IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL 59
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 72
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 73 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 112
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ E M SLD FL
Sbjct: 89 Q-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 66
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 67 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 106
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL-------PDGQIIAVKKLSKTSTQGFE-EFKNEV 493
E A +++++ +LG+G +G VY+GV P+ + +A+K +++ ++ EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETR-VAIKTVNEAASMRERIEFLNEA 64
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +++R+LG Q ++I E M + L +L
Sbjct: 65 SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 104
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP + A AT+ +SI+ +G G +G V G L P + I+V K+ T
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N+IR+ G ++ M++ E M SLD FL
Sbjct: 89 Q-RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ ++G G +G V+ G + +A+K + + E+F E + KL H L+++
Sbjct: 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 508 LGFCIDTQEHMLIYEYMPKRSL-DYF-----------LFGMCL 538
G C++ L+ E+M L DY L GMCL
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL 111
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 6 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 7 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 59
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 2 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 54
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 55 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 90
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 6 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 4 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 6 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 8 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 4 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 4 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 56
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 57 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 5 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 57
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 6 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 6 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 8 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 6 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 58
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 59 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 448 LSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTSTQGFEEFKNEVMLTAKLQH 501
+SI+ +G G +G V G L P + I+V K+ T Q +F E + + H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDH 76
Query: 502 LNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+IR+ G ++ M++ E M SLD FL
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 5 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 57
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 58 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 3 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 55
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 8 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 60
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 61 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 20 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 72
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 73 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 108
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 446 DRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLI 505
D L + +G G YG VYKG L D + +AVK S + Q F KN + ++H N+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIA 70
Query: 506 R-VLG---FCIDTQ-EHMLIYEYMPKRSLDYFL 533
R ++G D + E++L+ EY P SL +L
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 29 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 117
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 434 REYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EF 489
R+++L D E I LG+G +G VY + I+A+K L K + G E +
Sbjct: 29 RQWALEDFE-------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQL 81
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMP 525
+ EV + + L+H N++R+ G+ D LI EY P
Sbjct: 82 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 117
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G G V+ G +AVK L K + + F E L +LQH
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+R+ + + TQE + +I EYM SL FL
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL 98
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 448 LSIENKLGEGGYGPVYKGVL--PDGQ--IIAVKKLSKTST-QGFEEFKNEVMLTAKLQHL 502
+ IE +G G +G V G L P + +A+K L T + +F +E + + H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 503 NLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+I + G + M+I EYM SLD FL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFL 100
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 90 LGICL-TSTVQLIMQLMP 106
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 454 LGEGGYGPVYKGVLPD----GQI----IAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLI 505
LG+G + ++KGV + GQ+ + +K L K E F + +KL H +L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 506 RVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
G C+ E++L+ E++ SLD +L
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL 103
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 426 FNRTDPD--LREYSLADIEAATDRLSIENKLGEGGYGPVYKG--VLPDGQ--IIAVKKLS 479
F DP+ +RE++ E + IE +G G +G V G LP + +A+K L
Sbjct: 14 FTFEDPNEAVREFAK---EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 70
Query: 480 KTSTQG-FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
T+ +F +E + + H N+I + G + M+I E+M SLD FL
Sbjct: 71 SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL 125
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 83 LGICL-TSTVQLITQLMP 99
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L G +G VYKG+ +P+G+ +A+K+L + TS + +E +E + A + + ++ R+
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 90 LGICL-TSTVQLITQLMP 106
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +PDG+ +A+K L + TS + +E +E + A + + R+
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T L+ + MP
Sbjct: 85 LGICL-TSTVQLVTQLMP 101
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 454 LGEGGYGPVYKGV-LPDGQ----IIAVKKLSK-TSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG G +G VYKG+ +P+G+ +A+ +L + TS + +E +E + A + + ++ R+
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 508 LGFCIDTQEHMLIYEYMP 525
LG C+ T LI + MP
Sbjct: 117 LGICL-TSTVQLITQLMP 133
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 101
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 101
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L + +LG G +G V+ G +A+K L K T E F E + KL+H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKH 63
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+++ + + ++E + ++ EYM K SL FL
Sbjct: 64 DKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFL 94
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 100
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 100
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 100
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 103
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTG 102
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 102
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 101
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 102
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 98
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG 103
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 448 LSIENKLGEGGYGPVYKG--VLPDGQ--IIAVKKLSKTSTQG-FEEFKNEVMLTAKLQHL 502
+ IE +G G +G V G LP + +A+K L T+ +F +E + + H
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 503 NLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
N+I + G + M+I E+M SLD FL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFL 99
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 98
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHLNLI 505
L+I+ K+G G +G V++ G +AVK L + + EF EV + +L+H N++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 506 RVLGFCIDTQEHMLIYEYMPKRSL 529
+G ++ EY+ + SL
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSL 121
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 98
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTS--TQGFEEFKNEVMLTAKLQHLNLI 505
L+I+ K+G G +G V++ G +AVK L + + EF EV + +L+H N++
Sbjct: 39 LNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 506 RVLGFCIDTQEHMLIYEYMPKRSL 529
+G ++ EY+ + SL
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSL 121
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 69
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 100
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 435 EYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ----IIAVKKLSKTST-QGFEEF 489
+Y +A + +R+ LGEG +G VY+GV + + +AVK K T E+F
Sbjct: 2 QYGIAREDVVLNRI-----LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 56
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+E ++ L H ++++++G I+ + +I E P L ++L
Sbjct: 57 MSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 99
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 435 EYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ----IIAVKKLSKTST-QGFEEF 489
+Y +A + +R+ LGEG +G VY+GV + + +AVK K T E+F
Sbjct: 6 QYGIAREDVVLNRI-----LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 60
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+E ++ L H ++++++G I+ + +I E P L ++L
Sbjct: 61 MSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 103
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 106
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 435 EYSLADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQ----IIAVKKLSKTST-QGFEEF 489
+Y +A + +R+ LGEG +G VY+GV + + +AVK K T E+F
Sbjct: 18 QYGIAREDVVLNRI-----LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 72
Query: 490 KNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+E ++ L H ++++++G I+ + +I E P L ++L
Sbjct: 73 MSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL 115
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 444 ATDRLSIENKLGEGGYGPVYKGVLPDGQ-IIAVKKLSKTSTQ--GFE-EFKNEVMLTAKL 499
A + I LG+G +G VY + I+A+K L K + G E + + EV + + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 500 QHLNLIRVLGFCIDTQEHMLIYEYMP 525
+H N++R+ G+ D LI EY P
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP 88
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 98
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 106
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTG 99
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 69
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+++ + T+E + +I E+M K SL FL
Sbjct: 70 DKLVKL--HAVVTKEPIYIITEFMAKGSLLDFL 100
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 452 NKLGEGGYGPVYKGVLPDGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLG 509
K+GEG YG VYK G+I+A+K++ +G E+ L +L H N++ ++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 510 FCIDTQEHMLIYEYMPK 526
+ L++E+M K
Sbjct: 87 VIHSERCLTLVFEFMEK 103
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+KK+ T T+G E+ L +L H N++++L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 68 DVIHTENKLYLVFEHV-HQDLKTFMDASALTG 98
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
H N++++L + L++E++ + L F+ LT
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTG 102
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 242
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+++ + T+E + +I E+M K SL FL
Sbjct: 243 DKLVKL--HAVVTKEPIYIITEFMAKGSLLDFL 273
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYM 524
H N++++L + L++E++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 454 LGEGGYGPVYKGVLPD----GQI----IAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLI 505
LG+G + ++KGV + GQ+ + +K L K E F + +KL H +L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 506 RVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
G C E++L+ E++ SLD +L
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL 103
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 452 NKLGEGGYGPVYKGVLPDGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLG 509
K+GEG YG VYK G+I+A+K++ +G E+ L +L H N++ ++
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 510 FCIDTQEHMLIYEYMPK 526
+ L++E+M K
Sbjct: 87 VIHSERCLTLVFEFMEK 103
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYM 524
H N++++L + L++E++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYM 524
H N++++L + L++E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 448 LSIENKLGEGGYGPVYKGVL-PDGQIIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHLNLI 505
L + ++G G +G V+ G L D ++AVK +T + +F E + + H N++
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 506 RVLGFCIDTQEHMLIYEYM 524
R++G C Q ++ E +
Sbjct: 176 RLIGVCTQKQPIYIVMELV 194
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 449 SIEN-----KLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQ 500
S+EN K+GEG YG VYK G+++A+KK+ T T+G E+ L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYM 524
H N++++L + L++E++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 448 LSIENKLGEGGYGPVYKGVL-PDGQIIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHLNLI 505
L + ++G G +G V+ G L D ++AVK +T + +F E + + H N++
Sbjct: 116 LVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIV 175
Query: 506 RVLGFCIDTQEHMLIYEYM 524
R++G C Q ++ E +
Sbjct: 176 RLIGVCTQKQPIYIVMELV 194
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
E + L +E KLG G +G V+ +AVK + K + E F E + LQH
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQH 236
Query: 502 LNLIRVLGFCIDTQEHM-LIYEYMPKRSLDYFL 533
L+++ + T+E + +I E+M K SL FL
Sbjct: 237 DKLVKL--HAVVTKEPIYIITEFMAKGSLLDFL 267
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 431 PDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEE 488
P S A + DR KLGEG YG VYK + + +A+K++ + +G
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 489 FK-NEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEY 523
EV L +LQH N+I + LI+EY
Sbjct: 79 TAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEE--FKNEVMLTAKLQHLNLIRVLGF 510
+GEG YG V K D G+I+A+KK ++ + E+ L +L+H NL+ +L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 511 CIDTQEHMLIYEYMPKRSLD 530
C + L++E++ LD
Sbjct: 93 CKKKKRWYLVFEFVDHTILD 112
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLS---KTSTQG 485
DPD+ E D S ++G G +G VY + + +++A+KK+S K S +
Sbjct: 1 DPDVAELFFKD--DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK 58
Query: 486 FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEY 523
+++ EV KL+H N I+ G + L+ EY
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPE 131
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPE 137
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLS---KTSTQG 485
DPD+ E D S ++G G +G VY + + +++A+KK+S K S +
Sbjct: 40 DPDVAELFFKD--DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEK 97
Query: 486 FEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEY 523
+++ EV KL+H N I+ G + L+ EY
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE 103
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPE 108
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPE 137
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPE 141
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPE 139
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE 103
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPE 182
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPE 115
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPE 115
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPE 116
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPE 111
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 13/80 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ QG + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMP 525
+ E L+ +Y+P
Sbjct: 83 YSSGEKKDEVYLNLVLDYVP 102
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPE 122
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFI 182
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPE 103
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFI 121
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE 103
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFI 124
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPE 104
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE 103
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFI 128
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPE 103
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-EVMLTAKLQHLNLIRVLGFC 511
+G G +G VY+ L D G+++A+KK+ + + FKN E+ + KL H N++R+ F
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 512 IDTQEHM------LIYEYMPK 526
+ E L+ +Y+P+
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPE 107
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFI 124
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFI 142
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFI 141
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFI 122
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFI 123
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFI 122
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFI 115
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFI 118
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 445 TDRLSIENKLGEGGYGPVYK------GVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAK 498
+D ++ +LG+G + V + G+ +II KKLS + F++ + E + K
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 60
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYEYM 524
LQH N++R+ + H L+++ +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLV 86
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 445 TDRLSIENKLGEGGYGPVYK------GVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAK 498
+D ++ +LG+G + V + G+ +II KKLS + F++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYEYM 524
LQH N++R+ + H L+++ +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLV 87
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFI 120
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+ K+ T T+G E+ L +L H N++++L
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 99
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 452 NKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVL 508
K+GEG YG VYK G+++A+ K+ T T+G E+ L +L H N++++L
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 509 GFCIDTQEHMLIYEYMPKRSLDYFLFGMCLTA 540
+ L++E++ + L F+ LT
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKFMDASALTG 98
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 454 LGEGGYGPVYKGVL--PDGQII--AVKKLSKTSTQG-FEEFKNEVMLTAKLQHLNLIRVL 508
+G G +G VY G L DG+ I AVK L++ + G +F E ++ H N++ +L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 509 GFCIDTQ-EHMLIYEYMPKRSLDYFL 533
G C+ ++ +++ YM L F+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFI 121
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 445 TDRLSIENKLGEGGYGPVYK------GVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAK 498
+D ++ +LG+G + V + G+ +II KKLS + F++ + E + K
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 61
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYEYM 524
LQH N++R+ + H L+++ +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLV 87
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 453 KLGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGF--EEFKNEVMLTAKLQHLNLIRVLG 509
K+GEG YG V+K D GQI+A+KK ++ + E+ + +L+H NL+ +L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 510 FCIDTQEHMLIYEY 523
+ L++EY
Sbjct: 70 VFRRKRRLHLVFEY 83
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQII-AVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
++EN +G G +G V V +I A KK+ K + + FK E+ + L H N+IR+
Sbjct: 12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71
Query: 508 LGFCIDTQEHMLIYE 522
D + L+ E
Sbjct: 72 YETFEDNTDIYLVME 86
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQII-AVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
++EN +G G +G V V +I A KK+ K + + FK E+ + L H N+IR+
Sbjct: 29 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 88
Query: 508 LGFCIDTQEHMLIYE 522
D + L+ E
Sbjct: 89 YETFEDNTDIYLVME 103
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 445 TDRLSIENKLGEGGYGPVYK------GVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAK 498
+D ++ +LG+G + V + G+ +II KKLS + F++ + E + K
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS---ARDFQKLEREARICRK 84
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYEYM 524
LQH N++R+ + H L+++ +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLV 110
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 39/84 (46%)
Query: 446 DRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLI 505
++L I +G+G +G VY G I + + + + + FK EVM + +H N++
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 506 RVLGFCIDTQEHMLIYEYMPKRSL 529
+G C+ +I R+L
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTL 116
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKL---SKTSTQGFEEFKNEVMLTAKLQHLNLIRVL 508
KLG+G YG V+K + G+++AVKK+ + ST F+ ++LT H N++ +L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 509 GF--CIDTQEHMLIYEYM 524
+ ++ L+++YM
Sbjct: 76 NVLRADNDRDVYLVFDYM 93
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 452 NKLGEGGYGPV--YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLG 509
KLGEGG+ V +G L DG A+K++ Q EE + E + H N++R++
Sbjct: 35 QKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA 93
Query: 510 FCI 512
+C+
Sbjct: 94 YCL 96
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 74 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 101
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L + +G+G +G V G G +AVK + +T + F E + +L+H NL+++
Sbjct: 14 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 70
Query: 508 LGFCIDTQEHM-LIYEYMPKRSL-DYF 532
LG ++ + + ++ EYM K SL DY
Sbjct: 71 LGVIVEEKGGLYIVTEYMAKGSLVDYL 97
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L + +G+G +G V G G +AVK + +T + F E + +L+H NL+++
Sbjct: 23 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 79
Query: 508 LGFCIDTQEHM-LIYEYMPKRSL-DYF-------LFGMCL 538
LG ++ + + ++ EYM K SL DY L G CL
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 119
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 454 LGEGGYGPVYKGVLPDGQI-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFCI 512
LG+G YG VY G Q+ IA+K++ + ++ + E+ L L+H N+++ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 513 DTQEHMLIYEYMPKRSLDYFL 533
+ + E +P SL L
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL 96
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 107
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 80 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 107
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L + +G+G +G V G G +AVK + +T + F E + +L+H NL+++
Sbjct: 8 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 64
Query: 508 LGFCIDTQEHM-LIYEYMPKRSL-DYF 532
LG ++ + + ++ EYM K SL DY
Sbjct: 65 LGVIVEEKGGLYIVTEYMAKGSLVDYL 91
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 74 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 101
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L + +G+G +G V G G +AVK + +T + F E + +L+H NL+++
Sbjct: 195 LKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQL 251
Query: 508 LGFCIDTQEHM-LIYEYMPKRSL-DYF-------LFGMCL 538
LG ++ + + ++ EYM K SL DY L G CL
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL 291
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 454 LGEGGYGPVYKGVLPDGQI-IAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFCI 512
LG+G YG VY G Q+ IA+K++ + ++ + E+ L L+H N+++ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 513 DTQEHMLIYEYMPKRSLDYFL 533
+ + E +P SL L
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL 110
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 448 LSIENKLGEGGYGPVYKGV--LPDGQII--AVKKLSK---TSTQGFEEFKNEVMLTAKLQ 500
L + KLG+G +G V +G P G+ + AVK L + + ++F EV L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYMPKRSL 529
H NLIR+ G + T ++ E P SL
Sbjct: 70 HRNLIRLYGVVL-TPPMKMVTELAPLGSL 97
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 430 DPDLREYSLADIEAATDR----LSIENKLGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQ 484
+P R+ D ++ T + + KLGEG YG VYK + + GQI+A+K++ S
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-- 66
Query: 485 GFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEY 523
+E E+ + + ++++ G + ++ EY
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 424 GDFNR---TDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKG-VLPDGQII--AVKK 477
G NR +PD Y + D + + ++ +GEG +G V K + DG + A+K+
Sbjct: 1 GALNRKVKNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKR 56
Query: 478 LSK-TSTQGFEEFKNEVMLTAKL-QHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + S +F E+ + KL H N+I +LG C L EY P +L FL
Sbjct: 57 MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 114
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFK-NEVMLTAKLQHLNLIRVLGF 510
KLG G Y VYKG+ G +A+K++ S +G E+ L +L+H N++R+
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 511 CIDTQEHMLIYEYM 524
+ L++E+M
Sbjct: 72 IHTENKLTLVFEFM 85
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 26 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREM 113
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 14 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 112
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 430 DPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKGVL--PDGQIIAVK----KLSKTST 483
DP+ + A E + IE +G G +G V G L P + +AV K+ T
Sbjct: 28 DPNRAVHQFAK-ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK 86
Query: 484 QGFEEFKNEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
Q +F E + + H N++ + G + M++ E+M +LD FL
Sbjct: 87 QR-RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL 135
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 17 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREM 104
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 428 RTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKG-VLPDGQII--AVKKLSK-TST 483
+ +PD Y + D + + ++ +GEG +G V K + DG + A+K++ + S
Sbjct: 1 KNNPDPTIYPVLD----WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 56
Query: 484 QGFEEFKNEVMLTAKL-QHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+F E+ + KL H N+I +LG C L EY P +L FL
Sbjct: 57 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 107
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 10 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREM 97
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 11 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREM 98
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 26 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREM 113
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 428 RTDPDLREYSLADIEAATDRLSIENKLGEGGYGPVYKG-VLPDGQII--AVKKLSK-TST 483
+ +PD Y + D + + ++ +GEG +G V K + DG + A+K++ + S
Sbjct: 11 KNNPDPTIYPVLDW----NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK 66
Query: 484 QGFEEFKNEVMLTAKL-QHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+F E+ + KL H N+I +LG C L EY P +L FL
Sbjct: 67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 11 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREM 98
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 10 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 108
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 13 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 111
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Query: 448 LSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
L+ +LG G +G V G GQ K+ K + +EF E + L H L+++
Sbjct: 6 LTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
G C + +I EYM L +L M
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREM 93
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 453 KLGEGGYGPVYKGVLPDGQIIAVKKLSKT-STQGFEEFKNEVMLTAKLQHLNLIRVL 508
+LG+G +G VYK + ++A K+ T S + E++ E+ + A H N++++L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVLPD---GQI---IAVKKLSKT-STQGFEEFKNEVM 494
E + +++++ +LG+G +G VY+G D G+ +AVK ++++ S + EF NE
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ +++R+LG Q +++ E M L +L
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL 110
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 453 KLGEGGYGPVYKGVLPDGQIIAVKKLSKT-STQGFEEFKNEVMLTAKLQHLNLIRVL 508
+LG+G +G VYK + ++A K+ T S + E++ E+ + A H N++++L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 453 KLGEGGYGPVYKGVLPDGQIIAVKKLSKT-STQGFEEFKNEVMLTAKLQHLNLIRVL 508
+LG+G +G VYK + ++A K+ T S + E++ E+ + A H N++++L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 100
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKGVL------PDGQIIAVKKLSKTSTQG-FEE 488
Y + E A +RL + LG G +G V + P + +AVK L + +T ++
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 489 FKNEV-MLTAKLQHLNLIRVLGFCIDT-QEHMLIYEY 523
E+ +LT HLN++ +LG C M+I EY
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEY 113
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 449 SIENKLGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
I +LG+G +G VYK + G + A K + S + E++ E+ + A H ++++
Sbjct: 14 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 73
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
LG + ++ E+ P ++D + +
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLEL 102
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 449 SIENKLGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
I +LG+G +G VYK + G + A K + S + E++ E+ + A H ++++
Sbjct: 22 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81
Query: 508 LGFCIDTQEHMLIYEYMPKRSLDYFLFGM 536
LG + ++ E+ P ++D + +
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLEL 110
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 442 EAATDRLSIENKLGEGGYGPVY----KGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTA 497
+ +DR KLG G YG V K + I +KK S T+T +EV +
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 498 KLQHLNLIRVLGFCIDTQEHMLIYE 522
+L H N++++ F D + + L+ E
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVME 101
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 8 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 67
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 119
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 13 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 72
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 124
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 10 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 69
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 121
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 67 EYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 126
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 454 LGEGGYG--------PVYKGVLPDGQIIAVKKL-SKTSTQGFEEFKNEVMLTAKLQHLNL 504
LGEG +G P G G+++AVK L + Q +K E+ + L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 505 IRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
I+ G C D E L+ EY+P SL +L
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 14/91 (15%)
Query: 454 LGEGGYG--------PVYKGVLPDGQIIAVKKL-SKTSTQGFEEFKNEVMLTAKLQHLNL 504
LGEG +G P G G+++AVK L + Q +K E+ + L H ++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGT---GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 505 IRVLGFCIDTQEH--MLIYEYMPKRSLDYFL 533
I+ G C D E L+ EY+P SL +L
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL 109
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 441 IEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 500
+E + +++ +LG G +G V G GQ K+ K + +EF E KL
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKW-KGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS 61
Query: 501 HLNLIRVLGFCIDTQEHMLIYEYM 524
H L++ G C ++ EY+
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYI 85
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 453 KLGEGGYGPVYKGVLPDGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLGF 510
K+GEG YG VYK G+ A+KK+ + +G E+ + +L+H N++++
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 511 CIDTQEHMLIYEYM 524
+ +L++E++
Sbjct: 69 IHTKKRLVLVFEHL 82
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 453 KLGEGGYGPVYKGVLPDGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLGF 510
K+GEG YG VYK G+ A+KK+ + +G E+ + +L+H N++++
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 511 CIDTQEHMLIYEYM 524
+ +L++E++
Sbjct: 69 IHTKKRLVLVFEHL 82
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 453 KLGEGGYGPVYKGVLPDGQIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLGF 510
K+GEG YG VYK G+ A+KK+ + +G E+ + +L+H N++++
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 511 CIDTQEHMLIYEYM 524
+ +L++E++
Sbjct: 69 IHTKKRLVLVFEHL 82
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 452 NKLGEGGYGPVYKG--VLPDGQIIAVKKLSKTSTQGFE-EFKNEVMLTAKLQHLNLIRVL 508
+KLGEG Y VYKG L D ++A+K++ +G EV L L+H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 509 GFCIDTQEHMLIYEYMPK 526
+ L++EY+ K
Sbjct: 67 DIIHTEKSLTLVFEYLDK 84
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 454 LGEGGYGPVYK-GVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFCI 512
LG G +G V+K G +A K + + EE KNE+ + +L H NLI++
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 513 DTQEHMLIYEYM 524
+ +L+ EY+
Sbjct: 157 SKNDIVLVMEYV 168
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 445 TDRLSIENKLGEGGYGPVY----KGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQ 500
+DR KLG G YG V K + I +KK S T+T +EV + +L
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 501 HLNLIRVLGFCIDTQEHMLIYE 522
H N++++ F D + + L+ E
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVME 84
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 453 KLGEGGYGPV-YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 512 IDTQEHMLIYEYM 524
+ E ++ E++
Sbjct: 87 LVGDELWVVMEFL 99
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 453 KLGEGGYGPV-YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 512 IDTQEHMLIYEYM 524
+ E ++ E++
Sbjct: 91 LVGDELWVVMEFL 103
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 453 KLGEGGYGPV-YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 512 IDTQEHMLIYEYM 524
+ E ++ E++
Sbjct: 96 LVGDELWVVMEFL 108
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 453 KLGEGGYGPV-YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 512 IDTQEHMLIYEYM 524
+ E ++ E++
Sbjct: 98 LVGDELWVVMEFL 110
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTST 483
EY L + E DRL + LGEG +G V G+ D +AVK L +T
Sbjct: 55 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 114
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 115 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTST 483
EY L + E DRL + LGEG +G V G+ D +AVK L +T
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTST 483
EY L + E DRL + LGEG +G V G+ D +AVK L +T
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTST 483
EY L + E DRL + LGEG +G V G+ D +AVK L +T
Sbjct: 6 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 65
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTST 483
EY L + E DRL + LGEG +G V G+ D +AVK L +T
Sbjct: 14 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 73
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTSTQ-GFEEFKNE 492
E DRL + LGEG +G V G+ D +AVK L +T+ + +E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 493 V-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTST 483
EY L + E DRL + LGEG +G V G+ D +AVK L +T
Sbjct: 3 EYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT 62
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 114
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTSTQ-GFEEFKNE 492
E DRL + LGEG +G V G+ D +AVK L +T+ + +E
Sbjct: 17 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 76
Query: 493 V-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 118
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 453 KLGEGGYGPV-YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 512 IDTQEHMLIYEYM 524
+ E ++ E++
Sbjct: 141 LVGDELWVVMEFL 153
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 453 KLGEGGYGPV-YKGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+GEG G V V G+++AVKK+ Q E NEV++ QH N++ +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 512 IDTQEHMLIYEYM 524
+ E ++ E++
Sbjct: 218 LVGDELWVVMEFL 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQ----IIAVKKLSKTSTQ-GFEEFKNE 492
E DRL + LGEG +G V G+ D +AVK L +T+ + +E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 493 V-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ M+ +H N+I +LG C +I EY K +L +L
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I Y K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL 132
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 446 DRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNL 504
D I +LG G +G V++ G A K + E + E+ + L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 505 IRVLGFCIDTQEHMLIYEYM 524
+ + D E ++IYE+M
Sbjct: 217 VNLHDAFEDDNEMVMIYEFM 236
>pdb|4A5Q|A Chain A, Crystal Structure Of The Chitinase Chi1 Fitted Into The 3d
Structure Of The Yersinia Entomophaga Toxin Complex
pdb|4A5Q|B Chain B, Crystal Structure Of The Chitinase Chi1 Fitted Into The 3d
Structure Of The Yersinia Entomophaga Toxin Complex
pdb|4A5Q|C Chain C, Crystal Structure Of The Chitinase Chi1 Fitted Into The 3d
Structure Of The Yersinia Entomophaga Toxin Complex
pdb|4A5Q|D Chain D, Crystal Structure Of The Chitinase Chi1 Fitted Into The 3d
Structure Of The Yersinia Entomophaga Toxin Complex
pdb|4A5Q|E Chain E, Crystal Structure Of The Chitinase Chi1 Fitted Into The 3d
Structure Of The Yersinia Entomophaga Toxin Complex
Length = 546
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 316 YCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAEEDNKNRQNK 375
Y K++ D +VR K Y K+K L G ++W D+ +L+ AA E + +NK
Sbjct: 456 YSEATKVFISLDTPRSVRDKGRYVKDKGLGGLFIWSGDQDN-GILTNAAHEGLKRRIKNK 514
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 446 DRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNL 504
D I +LG G +G V++ G A K + E + E+ + L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 505 IRVLGFCIDTQEHMLIYEYM 524
+ + D E ++IYE+M
Sbjct: 111 VNLHDAFEDDNEMVMIYEFM 130
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 454 LGEGGYGPVYKGVL-PDG----QIIAVKKLSKTST-QGFEEFKNEVMLTAKLQHLNLIRV 507
LGEG +G V P+G + +AVK L S + K E+ + L H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 508 LGFCIDTQEH--MLIYEYMPKRSLDYFL 533
G C + + LI E++P SL +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL 116
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 454 LGEGGYGPVYKGVL-PDG----QIIAVKKLSKTST-QGFEEFKNEVMLTAKLQHLNLIRV 507
LGEG +G V P+G + +AVK L S + K E+ + L H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 508 LGFCIDTQEH--MLIYEYMPKRSLDYFL 533
G C + + LI E++P SL +L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL 104
>pdb|3OA5|A Chain A, The Structure Of Chi1, A Chitinase From Yersinia
Entomophaga
pdb|3OA5|B Chain B, The Structure Of Chi1, A Chitinase From Yersinia
Entomophaga
Length = 574
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 316 YCSIGKIWFGFDDVEAVRVKVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAEEDNKNRQNK 375
Y K++ D +VR K Y K+K L G ++W D+ +L+ AA E + +NK
Sbjct: 484 YSEATKVFISLDTPRSVRDKGRYVKDKGLGGLFIWSGDQDN-GILTNAAHEGLKRRIKNK 542
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 445 TDRLSIENKLGEGGYGPVYKGV-LPDGQ-----IIAVKKLSKTSTQGFEEFKNEVMLTAK 498
TD + +LG+G + V + + +P GQ II KKLS Q E E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYE 522
L+H N++R+ + H L+++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFD 83
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 445 TDRLSIENKLGEGGYGPVYKGV-LPDGQ-----IIAVKKLSKTSTQGFEEFKNEVMLTAK 498
TD + +LG+G + V + + +P GQ II KKLS Q E E +
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE---REARICRL 59
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYE 522
L+H N++R+ + H L+++
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFD 83
>pdb|4DWS|D Chain D, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 99/272 (36%), Gaps = 44/272 (16%)
Query: 128 RLYGFQGLDLSW-------NSANTSRDK--YNIGILFKEWRAAVD----LEARNNSSQSQ 174
R F +D+ W + N S DK N +L KE R+A+D R S +
Sbjct: 250 RFPMFSCVDIDWEYPGGGGDEGNISSDKDGENYVLLIKELRSALDSRFGYSNRXEISIAC 309
Query: 175 LILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSN 234
+ A + S + A +D+I ++M+ + W ++ G H LY P
Sbjct: 310 SGVXAXLKKSNIDQLVANGLDNI-------YLMSYDFFGTIWADYIGHHTNLYSPKDPGE 362
Query: 235 TEY------GITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL--YDDG 286
E +++ L + L + + + V + GPAL ++G
Sbjct: 363 QELFDLSAEAAIDYLHNELGIPMEXIHLGYANYGRSAVGGDLTTRQYTXNGPALGTMENG 422
Query: 287 LVTYKEIKNHIKNY---------GPNVRVMYNSTYVVN---YCSIGKIWFGFDDVEAVRV 334
+ +I +KNY G N V+ T + + D V+
Sbjct: 423 APEFFDI---VKNYMDAEHSLSMGKNGFVLMTDTNADADFLFSEAKGHFISLDTPRTVKQ 479
Query: 335 KVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
K YA + KL G + W D +L+ AA E
Sbjct: 480 KGEYAAKNKLGGVFSWSGDQD-CGLLANAARE 510
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 453 KLGEGGYGPVYKGVLPDG-QIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLG 509
K+GEG YG V+K + +I+A+K++ +G E+ L +L+H N++R+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 510 FCIDTQEHMLIYEYMPKRSLDYF 532
++ L++E+ + YF
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF 91
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 435 EYSLADI---EAATDRLSIENKLGEGGYGPVY--------KGVLPDGQIIAVKKLSKTST 483
EY L + E D+L++ LGEG +G V K + +AVK L +T
Sbjct: 21 EYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT 80
Query: 484 Q-GFEEFKNEV-MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ + +E+ M+ +H N+I +LG C +I Y K +L +L
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL 132
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 453 KLGEGGYGPVYKGVLPDG-QIIAVKKLS-KTSTQGFEEFK-NEVMLTAKLQHLNLIRVLG 509
K+GEG YG V+K + +I+A+K++ +G E+ L +L+H N++R+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 510 FCIDTQEHMLIYEYMPKRSLDYF 532
++ L++E+ + YF
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYF 91
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQH 501
+G G YG VYKG + GQ+ A+K + T + EE K E+ + K H
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSH 79
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
Query: 452 NKLGEGGYGPVYKGVL----PDGQIIAVKKL--SKTSTQGFEEFKNEVMLTAKLQHLNLI 505
K+GEG +G K +L DG+ +K++ S+ S++ EE + EV + A ++H N++
Sbjct: 30 QKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIV 86
Query: 506 R 506
+
Sbjct: 87 Q 87
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPV-----YKGVLPDGQIIAVKKLSKTSTQ--GFEEFKNEVM 494
E +RLS LG G +G V Y + D + K+ K S E +E+
Sbjct: 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 78
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L H+N++ +LG C ++I EY
Sbjct: 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEY 108
>pdb|4DWS|C Chain C, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 95/269 (35%), Gaps = 38/269 (14%)
Query: 128 RLYGFQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVD----LEARNNSSQSQ 174
R F +D+ W D+ NI +L KE R+A+D R S +
Sbjct: 250 RFPMFSCVDIDWEYPGGGGDEGNISSDXDGENYVLLIKELRSALDSRFGYSNRXEISIAC 309
Query: 175 LILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSN 234
+ A + S + A +D+I ++M+ + W ++ G H LY P
Sbjct: 310 SGVXAXLKKSNIDQLVANGLDNI-------YLMSYDFFGTIWADYIGHHTNLYSPKDPGE 362
Query: 235 TEY------GITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL--YDDG 286
E +++ L + L + + + V + GPAL ++G
Sbjct: 363 QELFDLSAEAAIDYLHNELGIPMEXIHLGYANYGRSAVGGDLTTRQYTXNGPALGTMENG 422
Query: 287 LVTYKEI------KNHIKNYGPNVRVMYNSTYVVN---YCSIGKIWFGFDDVEAVRVKVS 337
+ +I H + G N V+ T + + D V+ K
Sbjct: 423 APEFFDIVXNYMDAEHSLSMGKNGFVLMTDTNADADFLFSEAXGHFISLDTPRTVKQKGE 482
Query: 338 YAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
YA + KL G + W D +L+ AA E
Sbjct: 483 YAAKNKLGGVFSWSGDQD-CGLLANAARE 510
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 427 NRTDPDLREYSLADIEAATDR--LSIENKLGEGGYGPVYKGVLPDGQI------IAVKKL 478
N+ D+ E + + D L + ++G G + VYKG+ + + + +KL
Sbjct: 5 NQQQDDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL 64
Query: 479 SKTSTQGFEEFKNEVMLTAKLQHLNLIR 506
+K+ Q FK E LQH N++R
Sbjct: 65 TKSERQ---RFKEEAEXLKGLQHPNIVR 89
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 425 DFNRTDPDLREYSLADIEAATDRL-SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKT 481
D D D S + + R+ SI ++G GG V++ + QI A+K L +
Sbjct: 34 DLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 93
Query: 482 STQGFEEFKNEVMLTAKLQHLN--LIRVLGFCIDTQ 515
Q + ++NE+ KLQ + +IR+ + I Q
Sbjct: 94 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 129
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 425 DFNRTDPDLREYSLADIEAATDRL-SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKT 481
D D D S + + R+ SI ++G GG V++ + QI A+K L +
Sbjct: 34 DLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 93
Query: 482 STQGFEEFKNEVMLTAKLQHLN--LIRVLGFCIDTQ 515
Q + ++NE+ KLQ + +IR+ + I Q
Sbjct: 94 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 129
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+G+G G VY + + GQ +A+++++ E NE+++ + ++ N++ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 512 IDTQEHMLIYEYMPKRSLDYFLFGMCL 538
+ E ++ EY+ SL + C+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCM 113
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPV-----YKGVLPDGQIIAVKKLSKTSTQ--GFEEFKNEVM 494
E +RLS LG G +G V Y + D + K+ K S E +E+
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L H+N++ +LG C ++I EY
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRV 507
LG GG G V+ V D + +A+KK+ T Q + E+ + +L H N+++V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKV 73
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPV-----YKGVLPDGQIIAVKKLSKTSTQ--GFEEFKNEVM 494
E +RLS LG G +G V Y + D + K+ K S E +E+
Sbjct: 37 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 96
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L H+N++ +LG C ++I EY
Sbjct: 97 VLSYLGNHMNIVNLLGACTIGGPTLVITEY 126
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPV-----YKGVLPDGQIIAVKKLSKTSTQ--GFEEFKNEVM 494
E +RLS LG G +G V Y + D + K+ K S E +E+
Sbjct: 42 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 101
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L H+N++ +LG C ++I EY
Sbjct: 102 VLSYLGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 425 DFNRTDPDLREYSLADIEAATDRL-SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKT 481
D D D S + + R+ SI ++G GG V++ + QI A+K L +
Sbjct: 34 DLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA 93
Query: 482 STQGFEEFKNEVMLTAKLQHLN--LIRVLGFCIDTQ 515
Q + ++NE+ KLQ + +IR+ + I Q
Sbjct: 94 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ 129
>pdb|4DWS|A Chain A, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 99/270 (36%), Gaps = 40/270 (14%)
Query: 128 RLYGFQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVD----LEARNNSSQSQ 174
R F +D+ W D+ NI +L KE R+A+D R S +
Sbjct: 250 RFPMFSCVDIDWEYPGGGGDEGNISSDXDGENYVLLIKELRSALDSRFGYSNRXEISIAC 309
Query: 175 LILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSN 234
+ A + S + A +D+I ++M+ + W ++ G H LY P
Sbjct: 310 SGVXAXLKXSNIDQLVANGLDNI-------YLMSYDFFGTIWADYIGHHTNLYSPKDPGE 362
Query: 235 TEY------GITEWI--EEGLSADKLVLCLPFYGFA-----WTLVKPEDNG--IGAAATG 279
E +++ E G+ +K+ L YG + T + NG +G G
Sbjct: 363 QELFDLSAEAAIDYLHNELGIPMEKIHLGYANYGRSAVGGDLTTRQYTXNGPALGTMENG 422
Query: 280 PALYDDGLVTYKEIKNHIKNYGPNVRVMYNSTYVVN---YCSIGKIWFGFDDVEAVRVKV 336
+ D + Y + + H + G N V+ T + + D V K
Sbjct: 423 APEFFDIVXNYMDAE-HSLSMGKNGFVLMTDTNADADFLFSEAXGHFISLDTPRTVXQKG 481
Query: 337 SYAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
YA + KL G + W D +L+ AA E
Sbjct: 482 EYAAKNKLGGVFSWSGDQD-CGLLANAARE 510
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+G+G G VY + + GQ +A+++++ E NE+++ + ++ N++ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 512 IDTQEHMLIYEYMPKRSLDYFLFGMCL 538
+ E ++ EY+ SL + C+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCM 113
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPV-----YKGVLPDGQIIAVKKLSKTSTQ--GFEEFKNEVM 494
E +RLS LG G +G V Y + D + K+ K S E +E+
Sbjct: 35 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELK 94
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L H+N++ +LG C ++I EY
Sbjct: 95 VLSYLGNHMNIVNLLGACTIGGPTLVITEY 124
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+G+G G VY + + GQ +A+++++ E NE+++ + ++ N++ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 512 IDTQEHMLIYEYMPKRSLDYFLFGMCL 538
+ E ++ EY+ SL + C+
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCM 113
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+G+G G VY + + GQ +A+++++ E NE+++ + ++ N++ L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 512 IDTQEHMLIYEYMPKRSLDYFLFGMCL 538
+ E ++ EY+ SL + C+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCM 114
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
K+G+G G VY + + GQ +A+++++ E NE+++ + ++ N++ L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 512 IDTQEHMLIYEYMPKRSLDYFLFGMCL 538
+ E ++ EY+ SL + C+
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCM 114
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHLN--L 504
SI ++G GG V++ + QI A+K L + Q + ++NE+ KLQ + +
Sbjct: 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 90
Query: 505 IRVLGFCIDTQEHMLIYE 522
IR+ + I Q ++ E
Sbjct: 91 IRLYDYEITDQYIYMVME 108
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHLN--L 504
SI ++G GG V++ + QI A+K L + Q + ++NE+ KLQ + +
Sbjct: 31 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 90
Query: 505 IRVLGFCIDTQ 515
IR+ + I Q
Sbjct: 91 IRLYDYEITDQ 101
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 441 IEAATDRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLSKT 481
+E D L +LG G YG V K +P GQI+AVK++ T
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT 43
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 450 IENKLGEGGYGPVYK-GVLPDGQIIAVKKLS---KTSTQGFEEFKNEVMLTAKLQHLNLI 505
IE K+G G + VY+ L DG +A+KK+ + + E+ L +L H N+I
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVI 95
Query: 506 RVLGFCIDTQEHMLIYE 522
+ I+ E ++ E
Sbjct: 96 KYYASFIEDNELNIVLE 112
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHLN--L 504
SI ++G GG V++ + QI A+K L + Q + ++NE+ KLQ + +
Sbjct: 12 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 71
Query: 505 IRVLGFCIDTQ 515
IR+ + I Q
Sbjct: 72 IRLYDYEITDQ 82
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHLN--L 504
SI ++G GG V++ + QI A+K L + Q + ++NE+ KLQ + +
Sbjct: 15 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 74
Query: 505 IRVLGFCIDTQEHMLIYE 522
IR+ + I Q ++ E
Sbjct: 75 IRLYDYEITDQYIYMVME 92
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 444 ATDRLSIENKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFE-EFKNEVMLTAKL- 499
AT R ++G G YG VYK P G +A+K + +G EV L +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 500 --QHLNLIRVLGFCIDTQ 515
+H N++R++ C ++
Sbjct: 62 AFEHPNVVRLMDVCATSR 79
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 444 ATDRLSIENKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFE-EFKNEVMLTAKL- 499
AT R ++G G YG VYK P G +A+K + +G EV L +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 500 --QHLNLIRVLGFCIDTQ 515
+H N++R++ C ++
Sbjct: 62 AFEHPNVVRLMDVCATSR 79
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 449 SIENKLGEGGYGPVYKGVLPDGQIIAVK--KLSKTSTQGFEEFKNEVMLTAKLQHLN--L 504
SI ++G GG V++ + QI A+K L + Q + ++NE+ KLQ + +
Sbjct: 11 SILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 70
Query: 505 IRVLGFCIDTQEHMLIYE 522
IR+ + I Q ++ E
Sbjct: 71 IRLYDYEITDQYIYMVME 88
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 444 ATDRLSIENKLGEGGYGPVYKGVLP-DGQIIAVKKLS-KTSTQGFE-EFKNEVMLTAKL- 499
AT R ++G G YG VYK P G +A+K + +G EV L +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 500 --QHLNLIRVLGFCIDTQ 515
+H N++R++ C ++
Sbjct: 62 AFEHPNVVRLMDVCATSR 79
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + A L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 505 IRVLGFCIDTQEHMLIYEYM 524
IR+L + +LI E M
Sbjct: 76 IRLLDWFERPDSFVLILERM 95
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 447 RLSIENKLGEGGYGPVYKGVLPDGQIIA-VKKLSKTSTQGFEEFKNEVMLTAKLQHLNLI 505
+L+ KL E G ++KG I+ V K+ ST+ +F E H N++
Sbjct: 11 QLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 506 RVLGFC--IDTQEHMLIYEYMPKRSL 529
VLG C LI +MP SL
Sbjct: 71 PVLGACQSPPAPHPTLITHWMPYGSL 96
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLSKT 481
+ E D L +LG G YG V K +P GQI+AVK++ T
Sbjct: 45 NFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT 87
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 119
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLSKT 481
+ E D L +LG G YG V K +P GQI AVK++ T
Sbjct: 28 NFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRAT 70
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 104
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 120
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 133
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 446 DRLSIENKLGEGGYGPVYKGVLPDGQI----IAVKKL---SKTSTQGFEEFKNEVMLTAK 498
+R I +KLG GG VY L + I +A+K + + + + F+ EV +++
Sbjct: 11 ERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 499 LQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
L H N++ ++ + + L+ EY+ +L ++
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI 102
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 120
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 100
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 105
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 105
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 119
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 100
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 100
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 105
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 132
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 120
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 454 LGEGGYGPVYKGVLP-DGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFCI 512
+G GG+G V+K DG+ ++++ + E+ + EV AKL H+N++ G C
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNG-CW 74
Query: 513 DTQEHMLIYEYMPKRSLD 530
D ++Y P+ S D
Sbjct: 75 DG------FDYDPETSDD 86
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 103
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 147
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 147
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 454 LGEGGYGPVYKGVLP-DGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFCI 512
+G GG+G V+K DG+ +K++ + E+ + EV AKL H+N++ G C
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNG-CW 73
Query: 513 DTQEHMLIYEYMPKRS 528
D ++Y P+ S
Sbjct: 74 DG------FDYDPETS 83
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 432 DLREYSLADI--EAATDRLSIENKLGEGGYGPVYK----GVLPDGQII--AVKKL-SKTS 482
D REY D+ E + L LG G +G V G+ G I AVK L K
Sbjct: 30 DFREYEY-DLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD 88
Query: 483 TQGFEEFKNEVMLTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ E +E+ + +L H N++ +LG C + LI+EY
Sbjct: 89 SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEY 130
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 124 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 152
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 139
>pdb|2FN6|A Chain A, Helicobacter Pylori Psec, Aminotransferase Involved In The
Biosynthesis Of Pseudoaminic Acid
pdb|2FN6|B Chain B, Helicobacter Pylori Psec, Aminotransferase Involved In The
Biosynthesis Of Pseudoaminic Acid
pdb|2FNI|A Chain A, Psec Aminotransferase Involved In Pseudoaminic Acid
Biosynthesis
pdb|2FNI|B Chain B, Psec Aminotransferase Involved In Pseudoaminic Acid
Biosynthesis
pdb|2FNU|A Chain A, Psec Aminotransferase With External Aldimine
pdb|2FNU|B Chain B, Psec Aminotransferase With External Aldimine
Length = 375
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 452 NKLGEGGYGPVYKGVLPDGQI--IAVKKLSKTSTQGF--EEFKNEVMLTAKLQHLNLIRV 507
N L E GY PV+ G+ DG I +A++KL T+ ++ + + +Q L
Sbjct: 89 NMLLESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHS 148
Query: 508 LGFCIDTQEHMLIYEYMPKR 527
L F D+ H L EY K+
Sbjct: 149 LSFLSDSS-HALGSEYQNKK 167
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 454 LGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFCI 512
LG+G +G K + G+++ +K+L + + F EV + L+H N+++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 513 DTQEHMLIYEYM 524
+ I EY+
Sbjct: 78 KDKRLNFITEYI 89
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKGVLPD-GQIIAVKKLSKTSTQGFEEFKN-----EV 493
D+++ R + LGEG + VYK + QI+A+KK+ ++ N E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 494 MLTAKLQHLNLIRVLGFCIDTQEHMLIYEYM 524
L +L H N+I +L L++++M
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 446 DRLSIENKLGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNL 504
D I +LG G +G V++ V G++ K ++ KNE+ + +L H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 505 IRVLGFCIDTQEHMLIYEYM 524
I + D E +LI E++
Sbjct: 111 INLHDAFEDKYEMVLILEFL 130
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKN------EVMLTAKLQH--LNL 504
LG GG+G VY G+ + D +A+K + K + E N EV+L K+ +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 505 IRVLGFCIDTQEHMLIYEYMPKRSLDYFLF 534
IR+L + +LI E P+ D F F
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDF 127
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIR 506
LG+G +G V K D + A+KK+ T + +EVML A L H ++R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVR 66
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 453 KLGEGGYGPVYKGV-LPDGQIIAVKKLSKT 481
++G G YG V K V P GQI+AVK++ T
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRST 58
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 12/104 (11%)
Query: 440 DIEAATDRLSIENKLGEGGYGPVYKG-VLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAK 498
D EA + LG+GG+G V+ G L D +A+K + + G+ + V +
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 499 LQ----------HLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYF 532
+ H +IR+L + +TQE ++ P + D F
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDW-FETQEGFMLVLERPLPAQDLF 127
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL++ LG G +G V + + +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGAC 100
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL++ LG G +G V + + +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGAC 100
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHLNLIR 506
LG+G +G V K D + A+KK+ T + +EVML A L H ++R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVR 66
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 438 LADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQG 485
+A++ A +++ + G YG V GV +G +A+K++ T + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 438 LADIEAATDRLSIENKLGEGGYGPVYKGVLPDGQIIAVKKLSKTSTQG 485
+A++ A +++ + G YG V GV +G +A+K++ T + G
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDG 61
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVY------KGVLPDGQIIAVKKLSKTSTQGFEEFK 490
SLAD A I LGEG +G V G +II K L+K+ QG +
Sbjct: 6 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 62
Query: 491 NEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
E+ L+H ++I++ E +++ EY DY +
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 105
>pdb|4DWS|B Chain B, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 96/272 (35%), Gaps = 44/272 (16%)
Query: 128 RLYGFQGLDLSWNSANTSRDKYNIG---------ILFKEWRAAVD----LEARNNSSQSQ 174
R F +D+ W D+ NI +L E R+A+D R S +
Sbjct: 250 RFPMFSCVDIDWEYPGGGGDEGNISSDXDGENYVLLIXELRSALDSRFGYSNRXEISIAC 309
Query: 175 LILTAKVAHSPLSTAAAYPVDSIRQYLNWVHVMTTGYSKPTWTNFTGAHAALYDPNSVSN 234
+ A + S + A +D+I ++M+ + W ++ G H LY P
Sbjct: 310 SGVXAXLKXSNIDQLVANGLDNI-------YLMSYDFFGTIWADYIGHHTNLYSPKDPGE 362
Query: 235 TEY------GITEWIEEGLSADKLVLCLPFYGFAWTLVKPEDNGIGAAATGPAL--YDDG 286
E +++ L + L + + + V + GPAL ++G
Sbjct: 363 QELFDLSAEAAIDYLHNELGIPMEXIHLGYANYGRSAVGGDLTTRQYTXNGPALGTMENG 422
Query: 287 LVTYKEIKNHIKNY---------GPNVRVMYNSTYVVN---YCSIGKIWFGFDDVEAVRV 334
+ +I +KNY G N V+ T + + D V+
Sbjct: 423 APEFFDI---VKNYMDAEHSLSMGKNGFVLMTDTNADADFLFSEAKGHFISLDTPRTVKQ 479
Query: 335 KVSYAKEKKLRGYYVWEVSYDHYWMLSRAAAE 366
K YA + KL G + W D +L+ AA E
Sbjct: 480 KGEYAAKNKLGGVFSWSGDQD-CGLLANAARE 510
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 437 SLADIEAATDRLSIENKLGEGGYGPVY------KGVLPDGQIIAVKKLSKTSTQGFEEFK 490
SLAD A I LGEG +G V G +II K L+K+ QG +
Sbjct: 5 SLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIE 61
Query: 491 NEVMLTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
E+ L+H ++I++ E +++ EY DY +
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 104
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL++ LG G +G V + + +AVK L + +T
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGAC 101
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGAC 91
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGAC 91
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 447 RLSIENKLGEGGYGPVYKGVLPDGQIIA-VKKLSKTSTQGFEEFKNEVMLTAKLQHLNLI 505
+L+ KL E G ++KG I+ V K+ ST+ +F E H N++
Sbjct: 11 QLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70
Query: 506 RVLGFC 511
VLG C
Sbjct: 71 PVLGAC 76
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGAC 102
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGAC 100
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGAC 100
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGAC 91
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGAC 100
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGAC 91
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGAC 102
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 73 REGNIQYLFLEY 84
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGAC 137
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL--PDGQ----IIAVKKLSK-TSTQGFEEFKNEVM 494
E L + LGEG +G V K G+ +AVK L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ ++ H ++I++ G C +LI EY SL FL
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 74 REGNIQYLFLEY 85
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGAC 93
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL--PDGQ----IIAVKKLSK-TSTQGFEEFKNEVM 494
E L + LGEG +G V K G+ +AVK L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ ++ H ++I++ G C +LI EY SL FL
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGAC 95
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQI--IAVKKLSKTSTQGFEE-FKNEVM 494
E + L LG G +G V + G+ + + +AVK L T+ +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L QH N++ +LG C ++I EY
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 454 LGEGGYGPVYKGV-LPDGQIIAVKKLS-KTSTQGFEEFKNEVMLTAKLQHLNLIRVLGFC 511
LGEG YG V V + +AVK + K + E K E+ + L H N+++ G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 512 IDTQEHMLIYEY 523
+ L EY
Sbjct: 75 REGNIQYLFLEY 86
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 442 EAATDRLSIENKLGEGGYGPVYKGVL--PDGQ----IIAVKKLSK-TSTQGFEEFKNEVM 494
E L + LGEG +G V K G+ +AVK L + S + +E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN 78
Query: 495 LTAKLQHLNLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
+ ++ H ++I++ G C +LI EY SL FL
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQI--IAVKKLSKTSTQGFEE-FKNEVM 494
E + L LG G +G V + G+ + + +AVK L T+ +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L QH N++ +LG C ++I EY
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGAC 100
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 436 YSLADIEAATDRLSIENKLGEGGYGPVYKG------VLPDGQIIAVKKLSKTSTQG-FEE 488
Y + E DRL + LG G +G V + + +AVK L + +T
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 489 FKNEVMLTAKL-QHLNLIRVLGFC 511
+E+ + + HLN++ +LG C
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGAC 102
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 444 ATDRLSIENKLGEGGYGPVYKGVLP-DGQIIAVKKLSKTSTQGFEEF-----KNEVMLTA 497
AT R ++G G YG VYK P G +A+K + + G EV L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 498 KL---QHLNLIRVLGFCIDTQ 515
+L +H N++R++ C ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSR 87
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQI--IAVKKLSKTSTQGFEE-FKNEVM 494
E + L LG G +G V + G+ + + +AVK L T+ +E +E+
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L QH N++ +LG C ++I EY
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEY 116
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQI--IAVKKLSKTSTQGFEE-FKNEVM 494
E + L LG G +G V + G+ + + +AVK L T+ +E +E+
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L QH N++ +LG C ++I EY
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEY 123
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQI--IAVKKLSKTSTQGFEE-FKNEVM 494
E + L LG G +G V + G+ + + +AVK L T+ +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L QH N++ +LG C ++I EY
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 442 EAATDRLSIENKLGEGGYGPVYK----GVLPDGQI--IAVKKLSKTSTQGFEE-FKNEVM 494
E + L LG G +G V + G+ + + +AVK L T+ +E +E+
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 495 LTAKL-QHLNLIRVLGFCIDTQEHMLIYEY 523
+ + L QH N++ +LG C ++I EY
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 449 SIENKLGEGGYGPVY------KGVLPDGQIIAVKKLSKTSTQGFEEFKNEVMLTAKLQHL 502
I LGEG +G V G +II K L+K+ QG + E+ L+H
Sbjct: 7 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYLRLLRHP 64
Query: 503 NLIRVLGFCIDTQEHMLIYEYMPKRSLDYFL 533
++I++ E +++ EY DY +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIV 95
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,977,879
Number of Sequences: 62578
Number of extensions: 654701
Number of successful extensions: 2329
Number of sequences better than 100.0: 627
Number of HSP's better than 100.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 383
Number of HSP's that attempted gapping in prelim test: 1774
Number of HSP's gapped (non-prelim): 640
length of query: 540
length of database: 14,973,337
effective HSP length: 104
effective length of query: 436
effective length of database: 8,465,225
effective search space: 3690838100
effective search space used: 3690838100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)