BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009212
(540 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana
GN=RH50 PE=2 SV=2
Length = 781
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/321 (69%), Positives = 269/321 (83%), Gaps = 4/321 (1%)
Query: 220 RSNKHEKSGTKIDRGWRSGGSIHNLQYEPTDCPKQRHKY--SADGDFFSRKSFKELGCSD 277
R H K RGW S+ + D ++R+K + + FFSRK+F E+GCS+
Sbjct: 326 RGGSHSKGSDTNSRGWGDRRSV--VYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSE 383
Query: 278 YMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQG 337
M+++LK QNF RP+ IQAMAF PV++GKSCI+ADQSGSGKTLAYL+PVIQRLR+EELQG
Sbjct: 384 DMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQG 443
Query: 338 LSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGV 397
SKS+ G PRV++L PTAELASQVL+NCRS+SK GVPFRSMVVTGGFRQ+TQLENL++GV
Sbjct: 444 HSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGV 503
Query: 398 DVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLF 457
DVLIATPGRF +L+ EGIL L NLRCAILDEVDILF D++FE ALQ+LI+SSPVTAQYLF
Sbjct: 504 DVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLF 563
Query: 458 VTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKK 517
VTATLP+EIYNKLVEVFPDC+VVMGP +HR+S LEEFLVDCSGD ++KTPETAF NKK
Sbjct: 564 VTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKK 623
Query: 518 SALLQLIEKSPVSKTIVFCNK 538
+ALLQ++E++PVSKTI+FCNK
Sbjct: 624 TALLQIMEENPVSKTIIFCNK 644
>sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp.
japonica GN=Os03g0108600 PE=2 SV=2
Length = 641
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 242/478 (50%), Positives = 319/478 (66%), Gaps = 39/478 (8%)
Query: 75 PLETAGACELIDNDTGEKVIVWGGTDDDHDHDPPIPPKHLLDSSNWNKDPSQPTTSAPVL 134
P++T GA L+D TG VIVWGGTDD P + S + P +P +
Sbjct: 58 PMDTPGAYRLVDRATGRSVIVWGGTDDVSMPSPAV-------LSTTTRVPDRPKENG--- 107
Query: 135 RNNDCSIPSKKGVISSFSRLKAQRVKAVVDKRSAMGKKTVNALKQEGRLSKTTPSLE--- 191
+ I +F RLKAQ+VK V+ +RSA K+ + R S++ PS E
Sbjct: 108 ---------RSTSIGNFGRLKAQKVK-VLARRSAHLKREDSGRISTSRFSES-PSDESDE 156
Query: 192 -----------NFRELGEHIVDNDVPAESIDKNISDYNSRSNKHEKSGTKIDRGWRSGGS 240
N R+ D A S++ + Y ++ + G++ G + G+
Sbjct: 157 DGTYFERDRARNTRQNSRSRDDKTRGAHSLNSVLRQYRG-ADDLDFPGSEATSGSKRWGN 215
Query: 241 IHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFP 300
I ++ + + QR K D FFSR+SFKE+GCSD ++ +L+ F RPS IQAMA+
Sbjct: 216 ISDVTFGRQN---QRQKGPLDSGFFSRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYR 272
Query: 301 PVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQ 360
PV+EGKSCI+ DQSGSGKTLAYL PV+Q LR+EE++GL +S+ +PRVV+L PTAELASQ
Sbjct: 273 PVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQ 332
Query: 361 VLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLIN 420
VL+NCRS+SK GVPFRSMV TGGFRQKTQLE+L + +DVLIATPGRF++L++EG +QL N
Sbjct: 333 VLNNCRSISKSGVPFRSMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNN 392
Query: 421 LRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVV 480
LRC +LDEVDIL+ +E FE L LI+ +P+T QYLFVTATLP++IYNK+VE FPDC+++
Sbjct: 393 LRCVVLDEVDILYGEESFEQVLHQLITVAPLTTQYLFVTATLPLDIYNKVVETFPDCELI 452
Query: 481 MGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNK 538
MGPG+HR S LEE LVDCSGD +K PETAF NKKSAL+++IE+SPV KTI+FCNK
Sbjct: 453 MGPGVHRTSSRLEEILVDCSGDDNEEKNPETAFSNKKSALVKIIEESPVRKTIIFCNK 510
>sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana
GN=RH39 PE=2 SV=2
Length = 621
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 151/279 (54%), Gaps = 21/279 (7%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
++F+ELG S+ ++ +L+ N P++IQ + P V+E KS +L +GSGKTLAYLLP++
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
Q +R++E K+ PR V+L PT EL+ QV +S+S FRS++V+GG R +
Sbjct: 172 QLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHA-RFRSILVSGGSRIR 230
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFND------EDFEVA 441
Q ++L +D+++ TPGR + I+EG + ++ +LDE D +F+ F
Sbjct: 231 PQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAP 290
Query: 442 L-QSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCS 500
L Q + ++ Q + VTAT+ + + + E F + + +H+ + S
Sbjct: 291 LNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTLHKKIANARHDFIKLS 350
Query: 501 GDQESDKTPETAFLNKKSALLQLIEKSPV--SKTIVFCN 537
G + +K ALLQ++E S SK +VFCN
Sbjct: 351 GGE-----------DKLEALLQVLEPSLAKGSKVMVFCN 378
>sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp.
japonica GN=Os01g0184500 PE=2 SV=1
Length = 625
Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 149/281 (53%), Gaps = 27/281 (9%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF+ELG + ++ +L +P++IQ + P V+ G S +L +GSGKTLAYLLP++Q
Sbjct: 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170
Query: 329 RLRQEE-LQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
LR++E + G+S PR V+L PT EL QV +S+S FRS +V+GG R +
Sbjct: 171 LLRRDEAMLGMSMKPR-RPRAVVLCPTRELTEQVFRVAKSISHHA-RFRSTMVSGGSRIR 228
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLIS 447
Q ++L VD+++ TPGR + IK+G + +++ +LDE D +F D+ F ++ ++
Sbjct: 229 PQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMF-DQGFGPDIRKFLA 287
Query: 448 SSPVTA--------QYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMH-RISPGLEEFLVD 498
A Q + VTAT+ + + E F + R++ +F +
Sbjct: 288 PLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHDF-IK 346
Query: 499 CSGDQESDKTPETAFLNKKSALLQLIEKSPV--SKTIVFCN 537
SG + NK ALLQ++E S +K +VFCN
Sbjct: 347 LSGSE-----------NKLEALLQVLEPSLAKGNKVMVFCN 376
>sp|Q8SRB2|DBP2_ENCCU ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=DBP2 PE=3 SV=1
Length = 495
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 139/275 (50%), Gaps = 23/275 (8%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
+ F+E G S ++ SL + F P+ IQ +P + G+ + Q+GSGKTL+++LP +
Sbjct: 87 QKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPAL 146
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGV-PFRSMVVTGGFRQ 386
+ ++ Q L + P V++LAPT EL Q+ CG+ RS V GG
Sbjct: 147 --VHAKDQQPLRRGD--GPIVLVLAPTRELVMQIKKVVDEF--CGMFNLRSTAVYGGASS 200
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLI 446
+ Q+ L EG +V+IATPGR + L +G L + +LDE D + D FE L+ +I
Sbjct: 201 QPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRML-DMGFEPQLRKII 259
Query: 447 SSSPVTAQYLFVTATLPVEIYNKLVEVFPD--CKVVMGPGMHRISPGLEEFLVDCSGDQE 504
+ Q L +AT P E+ L E + + +VV+G + + +++ + CSG ++
Sbjct: 260 PKTNANRQTLMWSATWPREV-RGLAESYMNEYIQVVVGNEELKTNSKIKQIVEVCSGREK 318
Query: 505 SDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
DK L+ +++ K IVFCN K
Sbjct: 319 EDK------------LIGVLDNFKGDKVIVFCNMK 341
>sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DBP10 PE=1 SV=2
Length = 995
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 19/265 (7%)
Query: 243 NLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPV 302
N + + K +HK + SF G S ++ ++KR+ F +P+ IQ P +
Sbjct: 121 NEYFSTNNLEKTKHK---------KGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLI 171
Query: 303 VEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVL 362
++ + + ++GSGKT A++LP++++L+ S S R VIL+P+ ELA Q
Sbjct: 172 LQSRDIVGMARTGSGKTAAFILPMVEKLK-------SHSGKIGARAVILSPSRELAMQTF 224
Query: 363 SNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLR 422
+ + ++ G RS+++TGG + Q + DV+IATPGRF+ L E L L ++
Sbjct: 225 NVFKDFAR-GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVE 283
Query: 423 CAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMG 482
+ DE D LF + F+ L L++S P T Q L +ATLP + + + + +V
Sbjct: 284 YVVFDEADRLF-EMGFQEQLNELLASLPTTRQTLLFSATLPNSLVDFVKAGLVNPVLVRL 342
Query: 483 PGMHRISPGLEE-FLVDCSGDQESD 506
++S LE FL + D+E++
Sbjct: 343 DAETKVSENLEMLFLSSKNADREAN 367
>sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DBP10 PE=3 SV=1
Length = 995
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 19/265 (7%)
Query: 243 NLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPV 302
N + + K +HK + SF G S ++ ++KR+ F +P+ IQ P +
Sbjct: 121 NEYFSTNNLEKTKHK---------KGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLI 171
Query: 303 VEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVL 362
++ + + ++GSGKT A++LP++++L+ S S R VIL+P+ ELA Q
Sbjct: 172 LQSRDIVGMARTGSGKTAAFILPMVEKLK-------SHSGKIGARAVILSPSRELAMQTF 224
Query: 363 SNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLR 422
+ + ++ G RS+++TGG + Q + DV+IATPGRF+ L E L L ++
Sbjct: 225 NVFKDFAR-GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVE 283
Query: 423 CAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMG 482
+ DE D LF + F+ L L++S P T Q L +ATLP + + + + +V
Sbjct: 284 YVVFDEADRLF-EMGFQEQLNELLASLPTTRQTLLFSATLPNSLVDFVKAGLVNPVLVRL 342
Query: 483 PGMHRISPGLEE-FLVDCSGDQESD 506
++S LE FL + D+E++
Sbjct: 343 DAETKVSENLEMLFLSSKNADREAN 367
>sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP10 PE=3 SV=2
Length = 932
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 110/199 (55%), Gaps = 17/199 (8%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S +++ ++ ++ F +P+ IQ P ++E + + ++GSGKT A+ LP+++
Sbjct: 98 SFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157
Query: 329 RLRQEELQGLSKSTSGSPRV----VILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGF 384
+L+ S SPRV +IL+P+ ELASQ + SK G RS+V+ GG
Sbjct: 158 KLK-----------SHSPRVGVRAIILSPSRELASQTFKQVKEFSK-GTDLRSIVLIGGD 205
Query: 385 RQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQS 444
+ Q ++ DV++ATPGRF+ L E L+L + + DE D LF + F L
Sbjct: 206 SLEEQFSSMMTNPDVIVATPGRFLHLKVEMELELKTVEYIVFDEADRLF-EMGFAEQLNE 264
Query: 445 LISSSPVTAQYLFVTATLP 463
LI++ P + Q L +ATLP
Sbjct: 265 LIAALPSSRQSLLFSATLP 283
>sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp.
japonica GN=Os07g0301200 PE=2 SV=1
Length = 512
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 129/230 (56%), Gaps = 12/230 (5%)
Query: 257 KYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGS 316
K SAD + SF +++ K F RPS IQA A+P +++G+ I +GS
Sbjct: 83 KGSADAKYAPLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGS 140
Query: 317 GKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSN-CRSLSKCGVPF 375
GKT+A+ +P + +R++ G + G PRV++L+PT ELA Q+ C + + CG+
Sbjct: 141 GKTIAFGVPALMHVRRK--MGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCGIS- 197
Query: 376 RSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFND 435
S+ + GG + Q+ L+ GVD++I TPGR LI+ GI +L ++ +LDE D + D
Sbjct: 198 -SVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRML-D 255
Query: 436 EDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPD---CKVVMG 482
FE +++++S + Q + +AT P ++ +L + F D KVV+G
Sbjct: 256 MGFEPEVRAILSQTASVRQTVMFSATWPPAVH-QLAQEFMDPNPIKVVIG 304
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 152/304 (50%), Gaps = 22/304 (7%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAM 297
S+ + E + ++R + + +G + + F+++G +Y+++ + + F+ P+ IQ+
Sbjct: 61 SVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQ 120
Query: 298 AFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAEL 357
+P + G+ I ++GSGKTLAYLLP I + + + + P V++LAPT EL
Sbjct: 121 GWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPIL----APGDGPIVLVLAPTREL 176
Query: 358 ASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQ 417
A Q+ +S + GG + Q+ +LQ+GV+++IATPGR + +I+
Sbjct: 177 AVQIQQEATKFGASS-KIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTN 235
Query: 418 LINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVE--VFP 475
L + +LDE D + D FE ++ ++S Q L+ +AT P E+ +L +F
Sbjct: 236 LRRVTYLVLDEADRML-DMGFEPQIKKIVSQIRPDRQTLYWSATWPKEV-EQLARNFLFD 293
Query: 476 DCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVF 535
KV++G EE + + Q + E+ NK LL+ I S+ ++F
Sbjct: 294 PYKVIIGS---------EELKANHAISQHVEILSESQKYNKLVNLLEDIMDG--SRILIF 342
Query: 536 CNKK 539
+ K
Sbjct: 343 MDTK 346
>sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp10 PE=3 SV=1
Length = 932
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 124/236 (52%), Gaps = 10/236 (4%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + +++++ R+ F P+ IQ P ++E + + ++GSGKT A+++P+IQ+
Sbjct: 92 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQK 151
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S ST R +IL+P+ ELA Q L + L K G +++++ GG + Q
Sbjct: 152 LK-------SHSTQVGARGLILSPSRELALQTLKVVKELGK-GTDLKAVLLVGGDSLEEQ 203
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L ++R + DE D LF + F L ++
Sbjct: 204 FSMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLF-EMGFAAQLTEILHGL 262
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEE-FLVDCSGDQE 504
P T Q L +ATLP + + +V +ISP L+ F SGD+E
Sbjct: 263 PSTRQTLLFSATLPKSLVEFARAGLQEPTLVRLDTESKISPDLQNAFFSVKSGDKE 318
>sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP10 PE=3 SV=1
Length = 969
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 124/235 (52%), Gaps = 9/235 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S ++ ++ ++ F +P+ IQ P +++ + + ++GSGKT A++LP+I+
Sbjct: 116 SFASFGLSKLILVNISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIE 175
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ + S+ R +IL+P+ ELA Q S + S+ G RS+++TGG +
Sbjct: 176 KLK-------THSSKIGARAIILSPSRELAMQTHSVFKEFSR-GTHLRSVLLTGGDSLED 227
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS 448
Q + DV+IATPGRF+ L E L L ++ A+ DE D LF + F+ L L+++
Sbjct: 228 QFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYAVFDEADRLF-EMGFQEQLNELLAA 286
Query: 449 SPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQ 503
P + Q L +ATLP + + + +V +IS LE + D+
Sbjct: 287 LPSSRQTLLFSATLPTSLVDFAKAGLVNPVLVRLDAESKISDNLEMLFLSTKNDE 341
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 127/247 (51%), Gaps = 11/247 (4%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAM 297
SI + + T +QR G R K+F++ G S ++ ++K+Q + +P+ IQ
Sbjct: 198 SISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQ 257
Query: 298 AFPPVVEGKSCILADQSGSGKTLAYLLP-VIQRLRQEELQGLSKSTSGSPRVVILAPTAE 356
A P V+ G+ I ++GSGKT A++LP ++ + Q ELQ P VI APT E
Sbjct: 258 ALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQ-----RDEGPIGVICAPTRE 312
Query: 357 LASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGIL 416
LA Q+ + SK R V GG + Q + L+ G ++++ATPGR + ++K L
Sbjct: 313 LAHQIFLEAKKFSKA-YGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKAL 371
Query: 417 QLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPD 476
++ +LDE D +F D FE ++S++ Q L +AT+P ++ E+ D
Sbjct: 372 TMMRASYLVLDEADRMF-DLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSD 430
Query: 477 -CKVVMG 482
+V +G
Sbjct: 431 PIRVTVG 437
>sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP10 PE=3 SV=2
Length = 914
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 107/195 (54%), Gaps = 9/195 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S ++++++ ++ F +P+ IQ P V+E + + ++GSGKT A++LPV++
Sbjct: 100 SFASFGLSKFLLKNIAKKGFKQPTPIQRKTIPLVMESRDVVGMARTGSGKTAAFVLPVVE 159
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ S S R VIL+P+ ELA Q + +K G RS+V+ GG +
Sbjct: 160 KLK-------SHSPKVGVRAVILSPSRELALQTFKQVKEFTK-GTDLRSIVLIGGDSLED 211
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS 448
Q ++ D+L+ATPGRF+ L E L L + + DE D LF + F L L+ +
Sbjct: 212 QFSSMMTNPDILVATPGRFLHLKVEMNLDLKTVEYIVFDEADRLF-EMGFAEQLNELLVA 270
Query: 449 SPVTAQYLFVTATLP 463
P + Q L +ATLP
Sbjct: 271 LPPSRQSLLFSATLP 285
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 141/272 (51%), Gaps = 16/272 (5%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
KSF+++G DY++E +K+ F P+ IQ+ +P ++G+ I ++GSGKTL+YLLP I
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ + + + P V++LAPT ELA Q+ ++ + GG +
Sbjct: 159 VHVNAQPML----AHGDGPIVLVLAPTRELAVQIQQEASKFGSSS-KIKTTCIYGGVPKG 213
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLIS 447
Q+ +LQ+GV+++IATPGR + +++ L + +LDE D + D F+ ++ ++S
Sbjct: 214 PQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRML-DMGFDPQIRKIVS 272
Query: 448 SSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDK 507
Q L+ +AT P E+ +L + F + P +++ G + + + Q D
Sbjct: 273 HIRPDRQTLYWSATWPKEV-EQLSKKF-----LYNP--YKVIIGSSDLKANRAIRQIVDV 324
Query: 508 TPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
E+ NK LL+ I S+ +VF + K
Sbjct: 325 ISESQKYNKLVKLLEDIMDG--SRILVFLDTK 354
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 130/261 (49%), Gaps = 16/261 (6%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
+SF E G Y+++ +K++ F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 113 RSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGI 172
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFR 385
+ + L S P V++LAPT ELA Q+ C SK G R+ V GG
Sbjct: 173 VHINAQPLL----SPGDGPIVLVLAPTRELAVQIQKEC---SKFGASSRIRNTCVYGGVP 225
Query: 386 QKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSL 445
+ Q+ +LQ GV++LIATPGR + +++ G L + +LDE D + D FE ++ +
Sbjct: 226 KSQQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML-DMGFEPQIRKI 284
Query: 446 ISSSPVTAQYLFVTATLPVEIYNKLVEVFPD-CKVVMG----PGMHRISPGLEEFLVDCS 500
+ Q L +AT P E+ + D +V +G H I+ + E L D
Sbjct: 285 VDQIRPDRQTLMWSATWPKEVKQLASDYLHDPIQVQIGSLELSASHTITQ-IVEVLTDFE 343
Query: 501 GDQESDKTPETAFLNKKSALL 521
K ETA ++ S ++
Sbjct: 344 KRDRLAKHLETASQDQDSKII 364
>sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12)
GN=rhlE PE=1 SV=3
Length = 454
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF LG S ++ ++ Q + P+ IQ A P V+EG+ + + Q+G+GKT + LP++Q
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 329 RL--RQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQ 386
L RQ +G R +IL PT ELA+Q+ N R SK + RS+VV GG
Sbjct: 62 HLITRQPHAKGRRPV-----RALILTPTRELAAQIGENVRDYSKY-LNIRSLVVFGGVSI 115
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLI 446
Q+ L+ GVDVL+ATPGR + L + ++L + +LDE D + D F ++ ++
Sbjct: 116 NPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRML-DMGFIHDIRRVL 174
Query: 447 SSSPVTAQYLFVTATLPVEI 466
+ P Q L +AT +I
Sbjct: 175 TKLPAKRQNLLFSATFSDDI 194
>sp|Q3MSQ8|DDX4_RANLE Probable ATP-dependent RNA helicase DDX4 OS=Rana lessonae GN=ddx4
PE=2 SV=1
Length = 724
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 138/275 (50%), Gaps = 17/275 (6%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F+E D + +++ + +++ + IQ + P +V G+ + Q+GSGKT A+LLP++
Sbjct: 287 TFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILA 346
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
L + ++ + T P +I+APT EL +Q+ + R S G R +V+ GG +
Sbjct: 347 HLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFS-YGTCVRPVVIYGGTQMFH 405
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFN---DEDFEVALQSL 445
L+ + EG ++L ATPGR + +I++ + L LR +LDE D + + ED E L+S
Sbjct: 406 SLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSS 465
Query: 446 ISSSPVTAQYLFVTATLPVEIYNKLVEVF-PDCKVVMGPGMHRISPGLEEFLVDCSGDQE 504
S Q L +AT P I + E+ PD V+ + +E+ ++
Sbjct: 466 GMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQMVI------- 518
Query: 505 SDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
E KK L++++++ +T+VF K
Sbjct: 519 -----EVDEFGKKDKLMEILQEIGSERTMVFVKTK 548
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 6/199 (3%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
++F E G +Y+++ +K + F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 114 RTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGI 173
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ + L S P V++LAPT ELA Q+ C + R+ V GG +
Sbjct: 174 VHINAQPLL----SPGDGPVVLVLAPTRELAVQIQKECSKFGRSS-RIRNTCVYGGVPKS 228
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLIS 447
Q+ +LQ GV++LIATPGR + +++ G L + +LDE D + D FE ++ ++
Sbjct: 229 QQIRDLQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRML-DMGFEPQIRKIVD 287
Query: 448 SSPVTAQYLFVTATLPVEI 466
Q L +AT P E+
Sbjct: 288 QIRPDRQTLMWSATWPKEV 306
>sp|Q0UMB6|DBP10_PHANO ATP-dependent RNA helicase DBP10 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP10 PE=3 SV=1
Length = 878
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 140/274 (51%), Gaps = 26/274 (9%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + +++++ ++ F P+ IQ A P +++G + ++GSGKT A+++P+I+R
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ + S R VI++P+ ELA Q L + + G R++++ GG + Q
Sbjct: 140 LK-------THSAKVGARGVIMSPSRELALQTLKVVKEFGR-GTDLRTILLVGGDSLEEQ 191
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
++ D++IATPGRF+ L E L L +++ + DE D LF + F L ++ +
Sbjct: 192 FNSMTTNPDIIIATPGRFLHLKVEMGLDLSSVQYIVFDEADRLF-EMGFAAQLAEILYAL 250
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEE-FLVDCSGDQESDKT 508
P + Q L +ATLP + + K++ +ISP L+ + SGD++
Sbjct: 251 PTSRQTLLFSATLPKSLVEFARAGLQEPKLIRLDAESKISPDLKSAYFTIKSGDRD---- 306
Query: 509 PETAFLNKKSALLQLIE---KSPVSKTIVFCNKK 539
AL+ L+E K PV +T V+ K
Sbjct: 307 ---------GALIHLLENVIKMPVGQTEVWKQAK 331
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 10/257 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F E G Y+++ +K+Q F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 117 NFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPAIV 176
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+ + + S P V++LAPT ELA Q+ C K R+ V GG +
Sbjct: 177 HINAQPML----SHGDGPIVLVLAPTRELAVQIQQECSKFGKSS-KIRNTCVYGGVPRGQ 231
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS 448
Q+ +L GV+++IATPGR + +++ G L + +LDE D + D FE ++ ++
Sbjct: 232 QIRDLARGVEIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRML-DMGFEPQIRKIVDQ 290
Query: 449 SPVTAQYLFVTATLPVEIYNKLVEVFPD-CKVVMGPGMHRISPGLEEFLVDCSGDQESD- 506
Q L +AT P E+ + D +V +G S + + + C+ ++ D
Sbjct: 291 IRPDRQTLMWSATWPKEVQRLAHDYLKDQIQVNIGSLELSASHNITQVVEVCTEYEKRDR 350
Query: 507 --KTPETAFLNKKSALL 521
K ET NK+S L
Sbjct: 351 LVKHLETVMENKESKCL 367
>sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp.
japonica GN=Os07g0143700 PE=2 SV=2
Length = 602
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 129/281 (45%), Gaps = 43/281 (15%)
Query: 272 ELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR-L 330
LG S +++E L + R IQ P ++GK I ++G+GKTLA+ +P++ R L
Sbjct: 88 RLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRIL 147
Query: 331 RQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQL 390
R E G ++ P +ILAPT ELA QV K P S+ V GG Q+
Sbjct: 148 RHNEKNGSGRN----PLAIILAPTRELARQVEKEF----KESAPLDSLCVYGGVPISHQM 199
Query: 391 ENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFN---DEDFEVALQSLIS 447
L GVDV++ TPGR + L++ G+L L ++ +LDE D + DED EV +++L
Sbjct: 200 RALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL-- 257
Query: 448 SSPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDK 507
P Q + +AT+P I + D ++D GD E K
Sbjct: 258 --PQNRQSMLFSATMPSWIRKITSKYLKD-----------------PIIIDLVGD-EDQK 297
Query: 508 TPE--------TAFLNKKSALLQLI-EKSPVSKTIVFCNKK 539
PE + K S L LI E + K IVF K
Sbjct: 298 LPEGISLYSIASEHYGKPSILGPLIKEHANGGKCIVFTQTK 338
>sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp.
japonica GN=Os01g0549400 PE=2 SV=2
Length = 792
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 144/296 (48%), Gaps = 24/296 (8%)
Query: 249 TDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGK 306
T+ + RH+ + GD SF+ G +++ ++R F P+ IQA ++P ++ +
Sbjct: 129 TEAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQ 188
Query: 307 SCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCR 366
+ ++GSGKTL YLLP +++ L + P V++LAPT ELA+Q+L
Sbjct: 189 DVVAIAKTGSGKTLGYLLPGFMHIKR-----LQNNPRSGPTVLVLAPTRELATQILEEAV 243
Query: 367 SLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAIL 426
+ S + GG + QL +L GVDV++ATPGR +++ + L + +L
Sbjct: 244 KFGRSSR-ISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVL 302
Query: 427 DEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVE---VFPDCKVVMGP 483
DE D + D FE ++ ++ P Q L TAT P E+ ++ E V P +V +G
Sbjct: 303 DEADRML-DMGFEPQIRKIVKEIPPRRQTLMYTATWPKEV-RRIAEDLLVHP-VQVTIG- 358
Query: 484 GMHRISPGLEEFLVDCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
++E + + + Q + + L + +L+ + SK ++FC K
Sbjct: 359 -------SVDELVANSAITQNVELITPSEKLRRLEQILRSQDSG--SKVLIFCTTK 405
>sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp2 PE=3 SV=1
Length = 549
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 110/216 (50%), Gaps = 8/216 (3%)
Query: 253 KQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCIL 310
+Q HK + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+ +
Sbjct: 108 RQEHKMTVQGKNVPRPVETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVG 167
Query: 311 ADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSK 370
++GSGKTL Y LP I + + L + P V++LAPT ELA Q+ + K
Sbjct: 168 IAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLVLAPTRELAVQIQTEITKFGK 223
Query: 371 CGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVD 430
R+ V GG + Q+ +L GV+V IATPGR + +++ G L + +LDE D
Sbjct: 224 SS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEAD 282
Query: 431 ILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEI 466
+ D FE ++ +IS Q +AT P E+
Sbjct: 283 RML-DMGFEPQIRKIISQIRPDRQTCMWSATWPKEV 317
>sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1
Length = 977
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 108/195 (55%), Gaps = 9/195 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S ++ ++ ++ F +P+ IQ P +++ + + ++GSGKT A++LP+I+
Sbjct: 122 SFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIE 181
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ S S+ R VIL+P+ ELA Q + SK G RS+++TGG +
Sbjct: 182 KLK-------SHSSKIGARAVILSPSRELALQTHRVFKEFSK-GTHLRSVLLTGGDSLED 233
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS 448
Q + DV++ATPGRF+ L E L L + + DE D LF + F+ L L+++
Sbjct: 234 QFSMMMSNPDVIVATPGRFLHLKVEMSLDLKTVEYVVFDEADRLF-EMGFQEQLNELLAA 292
Query: 449 SPVTAQYLFVTATLP 463
P+ Q L +ATLP
Sbjct: 293 LPMNRQTLLFSATLP 307
>sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP2 PE=3 SV=1
Length = 536
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 18/225 (8%)
Query: 242 HNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPP 301
H+++ + TD PK SF E G DY+++ +K+Q F +P+ IQ +P
Sbjct: 91 HDMKCDGTDIPK------------PITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPM 138
Query: 302 VVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQV 361
+ G+ + +GSGKTL+Y LP I + + L S P V++LAPT ELA Q+
Sbjct: 139 ALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLL----SPGDGPIVLVLAPTRELAVQI 194
Query: 362 LSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINL 421
C R+ V GG + Q+ +L GV++ IATPGR + +++ G L +
Sbjct: 195 QQECSKFGSSS-RIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDMLETGKTNLRRV 253
Query: 422 RCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEI 466
+LDE D + D FE ++ ++ Q L +AT P E+
Sbjct: 254 TYLVLDEADRML-DMGFEPQIRKIVDQIRPDRQTLMWSATWPKEV 297
>sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP10 PE=3
SV=1
Length = 897
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 120/232 (51%), Gaps = 9/232 (3%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G ++ +++++ R+ F P+ IQ A P +++ K + ++GSGKT A+++P+I++
Sbjct: 84 FQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEK 143
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
LR + S R +I++P+ ELA Q L + S+ G + +++ GG + Q
Sbjct: 144 LR-------AHSARFGTRALIMSPSRELAIQTLKVVKEFSR-GTDLKCVLLVGGDSLEEQ 195
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L +++ + DE D LF + F L ++ +
Sbjct: 196 FGYMAANPDIVIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLF-EMGFAAQLTEILHAL 254
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSG 501
P + Q L +ATLP + D +V ++SP LE G
Sbjct: 255 PPSRQSLLFSATLPASLVEFARAGLQDPSLVRLDAEQKVSPDLESAFFAVKG 306
>sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-10 PE=3 SV=1
Length = 934
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 127/256 (49%), Gaps = 21/256 (8%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + +++ ++ R+ F P+ IQ A P ++E K + ++GSGKT A+++P+I+R
Sbjct: 101 FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIER 160
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S R +I++P+ ELA Q L + L + G +++++ GG + Q
Sbjct: 161 LK-------GHSPRVGSRALIMSPSRELALQTLKVVKELGR-GTDLKTVLLVGGDSLEEQ 212
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L +++ + DE D LF + F L ++ +
Sbjct: 213 FGMMASNPDIIIATPGRFLHLKVEMNLSLASIKYVVFDEADRLF-EMGFATELTEILHAL 271
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTP 509
P + Q L +ATLP + + +V ++SP LE G +
Sbjct: 272 PPSRQTLLFSATLPSSLVEFARAGLQEPSLVRLDAETKVSPDLESAFFAVKGGE------ 325
Query: 510 ETAFLNKKSALLQLIE 525
K+ ALL L+
Sbjct: 326 ------KEGALLHLLH 335
>sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP2 PE=3 SV=1
Length = 552
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF E G DY++ LK Q F +P+ IQ +P + G+ + +GSGKTL+Y LP I
Sbjct: 117 SFDEAGFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 176
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFRQ 386
+ Q L K G P V++LAPT ELA Q+ + C SK G R+ V GG +
Sbjct: 177 HINA---QPLLKRGDG-PIVLVLAPTRELACQIQTEC---SKFGASSRIRNTCVYGGAPK 229
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLI 446
Q+ +L GV++ IATPGR + +++ G L + +LDE D + D FE ++ ++
Sbjct: 230 GPQIRDLANGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRML-DMGFEPQIRKIV 288
Query: 447 SSSPVTAQYLFVTATLPVEIYN 468
Q L +AT P E+ N
Sbjct: 289 DQIRPDRQTLMWSATWPKEVQN 310
>sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP1 PE=3 SV=1
Length = 617
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 26/272 (9%)
Query: 279 MIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQ------ 332
++E++K +F +P+ +Q + P V +G+ + Q+GSGKT +L P+ L +
Sbjct: 165 LMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPV 224
Query: 333 -EELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLE 391
E+ Q S G P ++LAPT ELA+Q+ R + R VV GG Q+
Sbjct: 225 PEKAQSF-YSRKGYPSALVLAPTRELATQIFEEARKFTYRSW-VRPCVVYGGAPIGNQMR 282
Query: 392 NLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS--- 448
+ G D+L+ATPGR L++ G + L N++ +LDE D + D FE ++ ++
Sbjct: 283 EVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRML-DMGFEPQIRHIVEECDM 341
Query: 449 -SPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDK 507
S Q L +AT PV+I L F D + + G V + + + +
Sbjct: 342 PSVENRQTLMFSATFPVDI-QHLARDFLDNYIFLSVGR-----------VGSTSENITQR 389
Query: 508 TPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
++KKSALL L+ T++F K
Sbjct: 390 ILYVDDMDKKSALLDLLSAEHKGLTLIFVETK 421
>sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP10 PE=3 SV=1
Length = 900
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 108/194 (55%), Gaps = 9/194 (4%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ LG + +++++ R+ F P+ IQ P V++ + + ++GSGKT A+++P+I++
Sbjct: 88 FQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 147
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S S R +IL+P+ ELA Q L + L + G +S+++ GG + Q
Sbjct: 148 LK-------SHSAKFGSRALILSPSRELALQTLKVVKELGR-GTDLKSVLLVGGDSLEEQ 199
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
E + D++IATPGRF+ L E L L ++R + DE D LF + F L ++
Sbjct: 200 FEYMASNPDIIIATPGRFLHLKVEMSLDLSSIRYVVFDEADRLF-EMGFATQLTEILHGL 258
Query: 450 PVTAQYLFVTATLP 463
P + Q L +ATLP
Sbjct: 259 PSSRQTLLFSATLP 272
>sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP1 PE=1 SV=2
Length = 617
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 26/272 (9%)
Query: 279 MIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQ------ 332
++E++K +F +P+ +Q + P V +G+ + Q+GSGKT +L P+ L +
Sbjct: 165 LMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPV 224
Query: 333 -EELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLE 391
E+ Q S G P ++LAPT ELA+Q+ R + R VV GG Q+
Sbjct: 225 PEKAQSF-YSRKGYPSALVLAPTRELATQIFEEARKFTYRSW-VRPCVVYGGAPIGNQMR 282
Query: 392 NLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS--- 448
+ G D+L+ATPGR L++ G + L N++ +LDE D + D FE ++ ++
Sbjct: 283 EVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRML-DMGFEPQIRHIVEECDM 341
Query: 449 -SPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDK 507
S Q L +AT PV+I L F D + + G V + + + +
Sbjct: 342 PSVENRQTLMFSATFPVDI-QHLARDFLDNYIFLSVGR-----------VGSTSENITQR 389
Query: 508 TPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
++KKSALL L+ T++F K
Sbjct: 390 ILYVDDMDKKSALLDLLSAEHKGLTLIFVETK 421
>sp|A4R5B8|DBP10_MAGO7 ATP-dependent RNA helicase DBP10 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=DBP10 PE=3 SV=1
Length = 914
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 131/260 (50%), Gaps = 18/260 (6%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + +++++ R+ F P+ IQ + P +++ + + ++GSGKT A+++P+I+R
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
LR + S R +I++P+ ELA Q L + K G +++++ GG + Q
Sbjct: 152 LR-------AHSARVGARALIMSPSRELALQTLKVVKEFGK-GTDLKTVLLVGGDSLEDQ 203
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L +++ + DE D LF + F L ++ S
Sbjct: 204 FGFMTTNPDIIIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLF-EMGFATQLTEILHSL 262
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTP 509
P + Q L +ATLP + D +V +ISP LE G ++
Sbjct: 263 PPSRQTLLFSATLPRSLVEFARAGLQDPSLVRLDAETKISPDLESAFFSVKGAEK----- 317
Query: 510 ETAFLNKKSALLQLIEKSPV 529
E A L+ +LQ + K P
Sbjct: 318 EGALLH----ILQDVIKMPT 333
>sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP2 PE=3 SV=3
Length = 554
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 105/200 (52%), Gaps = 10/200 (5%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF E G DY++ +K+Q F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 126 SFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 185
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVP--FRSMVVTGGFRQ 386
+ + L G P V++LAPT ELA Q+ C SK G R+ + GG +
Sbjct: 186 HINAQPLLG----PGDGPIVLVLAPTRELAVQIQQEC---SKFGASSRIRNTCIYGGAPK 238
Query: 387 KTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLI 446
Q+ +L GV++ IATPGR + +++ G L + +LDE D + D FE ++ ++
Sbjct: 239 GQQIRDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRML-DMGFEPQIRKIV 297
Query: 447 SSSPVTAQYLFVTATLPVEI 466
Q L +AT P E+
Sbjct: 298 DQIRPDRQTLMWSATWPKEV 317
>sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dbp10 PE=3 SV=1
Length = 929
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 119/224 (53%), Gaps = 9/224 (4%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + ++++++ R+ F P+ IQ P +++G+ + ++GSGKT A+++P+I++
Sbjct: 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEK 150
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S ST R +IL+P+ ELA Q L + L K G +S+++ GG + Q
Sbjct: 151 LK-------SHSTKVGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGDSLEEQ 202
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L ++R + DE D LF + F L ++
Sbjct: 203 FSLMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLF-EMGFADQLTEILYGL 261
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLE 493
P Q L +ATLP + + ++ +ISP LE
Sbjct: 262 PANRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPDLE 305
>sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=DBP10 PE=3 SV=1
Length = 762
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 9/235 (3%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + ++ ++ R+ F P+ IQ P V+E + + ++GSGKT A+++P+I+R
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ + S R +I++P+ ELA Q L + L K G +++++ GG + Q
Sbjct: 148 LK-------AHSARVGARAIIMSPSRELALQTLKVVKELGK-GTDLKTVLLVGGDSLEEQ 199
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L ++R + DE D LF + F L ++ +
Sbjct: 200 FGLMAANPDIIIATPGRFLHLKVEMSLNLSSVRYVVFDEADRLF-EMGFAAQLTEILHAL 258
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQE 504
P + Q L +ATLP + + ++ ++SP LE G ++
Sbjct: 259 PPSRQTLLFSATLPSSLVEFARAGLQEPSLIRLDAETKVSPDLESAFFSVKGGEK 313
>sp|A4QSS5|DBP2_MAGO7 ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1
Length = 548
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 133/282 (47%), Gaps = 27/282 (9%)
Query: 217 YNSRSNKHEKSGTKIDRGWRSGGSIHNLQYEPTDCPKQRHKYSADGDFFSRKSFKELGCS 276
Y + +S ++D+ R H++ + +D PK ++F E G
Sbjct: 90 YKEHPDVTNRSQAEVDKFRRE----HSMAVQGSDVPK------------PVETFDEAGFP 133
Query: 277 DYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQ 336
Y+++ +K Q F P+ IQ+ +P + G+ + ++GSGKTL Y LP I + + L
Sbjct: 134 RYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLL 193
Query: 337 GLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEG 396
+ P V+ILAPT ELA Q+ + K R+ V GG + Q+ +L G
Sbjct: 194 ----APGDGPIVLILAPTRELAVQIQAEISKFGKSS-RIRNTCVYGGVPKGPQIRDLSRG 248
Query: 397 VDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYL 456
V+V IATPGR + +++ G L + +LDE D + D FE ++ +I Q L
Sbjct: 249 VEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRML-DMGFEPQIRKIIGQIRPDRQTL 307
Query: 457 FVTATLPVEIYNKLVEVFPD-CKVVMG----PGMHRISPGLE 493
+AT P E+ N + D +V +G HRI+ +E
Sbjct: 308 MWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVE 349
>sp|Q757U8|DBP10_ASHGO ATP-dependent RNA helicase DBP10 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP10
PE=3 SV=1
Length = 960
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 119/235 (50%), Gaps = 9/235 (3%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF G S +++ ++ R+ F +P+ IQ P +++ + + ++GSGKT A++LP+I+
Sbjct: 121 SFASFGLSKFILGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIE 180
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ S R +IL+P+ ELA Q + +K G RS+++TGG +
Sbjct: 181 KLKMH-------SAKIGARAMILSPSRELAMQTHKVFKEFAK-GSNLRSVLLTGGDGLED 232
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS 448
Q + DV+IATPGRF+ L E L L ++ + DE D LF + F+ L L+ S
Sbjct: 233 QFSMMMSNPDVIIATPGRFLHLKVEMNLDLHSIEYVVFDEADRLF-EMGFQEQLNELLGS 291
Query: 449 SPVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQ 503
P Q L +ATLP + + + +V ++S LE + D+
Sbjct: 292 LPTARQTLLFSATLPSSLVDFAKAGLTNPVLVRLDTETKVSENLEMLFLSVKNDE 346
>sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP2 PE=3 SV=1
Length = 542
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 8/219 (3%)
Query: 250 DCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKS 307
D ++ H+ + G R ++F E G Y++ +K Q F RP+ IQA +P + G+
Sbjct: 105 DAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRD 164
Query: 308 CILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRS 367
+ ++GSGKTL Y LP I + + L + P V++LAPT ELA Q+ +
Sbjct: 165 VVGIAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLVLAPTRELAVQIQTEITK 220
Query: 368 LSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILD 427
K R+ V GG + Q+ +L GV+V IATPGR + +++ G L + +LD
Sbjct: 221 FGKSS-RIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLD 279
Query: 428 EVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEI 466
E D + D FE ++ ++S Q +AT P ++
Sbjct: 280 EADRML-DMGFEPQIRKIVSQIRPDRQTCMWSATWPKDV 317
>sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=dbp10 PE=3 SV=1
Length = 936
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 118/224 (52%), Gaps = 9/224 (4%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + +++++ R+ F P+ IQ P ++E + + ++GSGKT A+++P+I++
Sbjct: 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S ST R +IL+P+ ELA Q L + L K G +S+++ GG + Q
Sbjct: 153 LK-------SHSTKFGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGDSLEEQ 204
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L +++ + DE D LF + F L ++
Sbjct: 205 FGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLF-EMGFAAQLTEILHGL 263
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLE 493
P T Q L +ATLP + D +V +ISP L+
Sbjct: 264 PSTRQTLLFSATLPKSLVEFARAGLQDPTLVRLDTESKISPDLQ 307
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
+F E G DY+++ +K Q F +P+ IQ +P + G+ I +GSGKTL+Y LP I
Sbjct: 128 TFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 187
Query: 329 RLR-QEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ Q +LQ P V++LAPT ELA Q+ + C K R+ V GG +
Sbjct: 188 HINAQPQLQ-----YGDGPIVLVLAPTRELAVQIQTECSKFGKSSR-IRNTCVYGGAPKG 241
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLIS 447
Q+ +L GV++ IATPGR + +++ G L + +LDE D + D FE ++ ++
Sbjct: 242 PQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRML-DMGFEPQIRKIVD 300
Query: 448 SSPVTAQYLFVTATLPVEI 466
Q L +AT P E+
Sbjct: 301 QIRPDRQTLMWSATWPKEV 319
>sp|A6R3L3|DED1_AJECN ATP-dependent RNA helicase DED1 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DED1 PE=3 SV=1
Length = 694
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 134/282 (47%), Gaps = 25/282 (8%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI- 327
+F ++++ ++ + P+ +Q + P V+ G+ + Q+GSGKT +L P++
Sbjct: 204 AFTNPPLHEHLLSNIVLARYTVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILS 263
Query: 328 QRLRQ-----EELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTG 382
Q L E +GL + P +IL PT EL SQ+ R VV G
Sbjct: 264 QSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELVSQIYDEARKFC-YRTALHPRVVYG 322
Query: 383 GFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVAL 442
G QL L +G +VL+ATPGR + +++ G + L +++ +LDE D + D FE +
Sbjct: 323 GAEMGNQLRQLDQGCNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRML-DMGFEPQI 381
Query: 443 QSLISSSPV----TAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPG-MHRISPGLEEFLV 497
+ ++ S + Q L +AT P +I KL E F + + G + S + + +V
Sbjct: 382 RRIVQGSDMPDKHMRQTLMFSATFPPDI-QKLAEEFLKDHIFLSVGRVGSTSENITQRIV 440
Query: 498 DCSGDQESDKTPETAFLNKKSALLQLIEKSPVSKTIVFCNKK 539
+C ESDK +K SALL ++ T+VF K
Sbjct: 441 EC----ESDK-------DKDSALLDILCSDSTGLTLVFVETK 471
>sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp2
PE=3 SV=1
Length = 545
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 13/248 (5%)
Query: 253 KQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCIL 310
+++H+ + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+ +
Sbjct: 102 RKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVG 161
Query: 311 ADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSK 370
++GSGKTL Y LP I + + L + P V+ILAPT ELA Q+ + K
Sbjct: 162 IAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLILAPTRELAVQIQTEISKFGK 217
Query: 371 CGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVD 430
R+ V GG + Q+ +L GV+V IATPGR + +++ G L + +LDE D
Sbjct: 218 SS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEAD 276
Query: 431 ILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPD-CKVVMG----PGM 485
+ D FE ++ +IS Q +AT P E+ + D +V +G
Sbjct: 277 RML-DMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSAN 335
Query: 486 HRISPGLE 493
HRI+ +E
Sbjct: 336 HRITQIVE 343
>sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=DBP10 PE=3 SV=1
Length = 926
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 269 SFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQ 328
SF LG S +++++ R+ F +P+ IQ P V+EGK + ++GSGKT A++LP+++
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 329 RLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKT 388
+L+ S R VIL+P+ ELA Q L + S G R ++ GG +
Sbjct: 163 KLK-------VHSAKVGARAVILSPSRELALQTLKVVKDFS-AGTDLRLAMLVGGDSLEE 214
Query: 389 QLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISS 448
Q + + D++IATPGRF+ L E L L ++ DE D LF + F + L++S
Sbjct: 215 QFKMMMSNPDIIIATPGRFLHLKVEMELSLASVEYICFDEADRLF-ELGFGEQMNELLAS 273
Query: 449 SPVTAQYLFVTATLP 463
P Q L +ATLP
Sbjct: 274 LPSNRQTLLFSATLP 288
>sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp10 PE=3 SV=1
Length = 928
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 270 FKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVIQR 329
F+ +G + +++++ R+ F P+ IQ P +++ + + ++GSGKT A+++P+I++
Sbjct: 91 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAFVIPMIEK 150
Query: 330 LRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQ 389
L+ S S+ R +IL+P+ ELA Q L + L K G +S+++ GG + Q
Sbjct: 151 LK-------SHSSKFGARGLILSPSRELALQTLKVVKELGK-GTDLKSVLLVGGDSLEEQ 202
Query: 390 LENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSS 449
+ D++IATPGRF+ L E L L ++R + DE D LF + F L ++
Sbjct: 203 FGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLF-EMGFAAQLTEILHGL 261
Query: 450 PVTAQYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEE-FLVDCSGDQE 504
P T Q L +ATLP + + ++ +ISP L+ F S D+E
Sbjct: 262 PTTRQTLLFSATLPKSLVEFARAGLQEPTLIRLDTESKISPDLQNAFFSVKSADKE 317
>sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens GN=DDX43
PE=2 SV=2
Length = 648
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 133/267 (49%), Gaps = 18/267 (6%)
Query: 275 CSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLP-VIQRLRQE 333
C ++E++K+ F +P+ IQ+ A+P V++G I Q+G+GKTL YL+P I + Q
Sbjct: 249 CYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQP 308
Query: 334 ELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENL 393
L+G P +++L PT ELA QV C S G+ RS+ V GG + Q+E L
Sbjct: 309 SLKG----QRNRPGMLVLTPTRELALQVEGECCKYSYKGL--RSVCVYGGGNRDEQIEEL 362
Query: 394 QEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLISSSPVTA 453
++GVD++IATPGR L + L N+ +LDE D + D FE + ++
Sbjct: 363 KKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKML-DMGFEPQIMKILLDVRPDR 421
Query: 454 QYLFVTATLPVEIYNKLVEVFPDCKVVMGPGMHRISPGLEEFLVDCSGDQESDKTPETAF 513
Q + +AT P ++ +L + + ++ + G + + S Q T E
Sbjct: 422 QTVMTSATWPHSVH-RLAQSYLKEPMI-------VYVGTLDLVAVSSVKQNIIVTTEEEK 473
Query: 514 LNKKSALLQLIEKSPVSKTIVFCNKKS 540
+ LQ + S K IVF ++K+
Sbjct: 474 WSHMQTFLQSM--SSTDKVIVFVSRKA 498
>sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-2 PE=3 SV=2
Length = 562
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 11/231 (4%)
Query: 268 KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCILADQSGSGKTLAYLLPVI 327
++F E G Y+++ +K Q F P+ IQ+ +P + G+ + ++GSGKTL Y LP I
Sbjct: 132 ETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 191
Query: 328 QRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSKCGVPFRSMVVTGGFRQK 387
+ + L + P V+ILAPT ELA Q+ K R+ V GG +
Sbjct: 192 VHINAQPLL----APGDGPIVLILAPTRELAVQIQQEISKFGKSS-RIRNTCVYGGVPKG 246
Query: 388 TQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVDILFNDEDFEVALQSLIS 447
Q+ +L GV+V IATPGR + +++ G L + +LDE D + D FE ++ +I
Sbjct: 247 PQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRML-DMGFEPQIRKIIG 305
Query: 448 SSPVTAQYLFVTATLPVEIYNKLVEVFPD-CKVVMG----PGMHRISPGLE 493
Q L +AT P E+ N + D +V +G HRI+ +E
Sbjct: 306 QIRPDRQTLMWSATWPKEVRNLAADFLTDFIQVNIGSMDLAANHRITQIVE 356
>sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS)
GN=DBP2 PE=3 SV=2
Length = 545
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 126/261 (48%), Gaps = 13/261 (4%)
Query: 240 SIHNLQYEPTDCPKQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAM 297
++ N + + ++ H+ + G R ++F E G Y+I +K Q F +P+ IQ+
Sbjct: 98 NVTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQGFAKPTPIQSQ 157
Query: 298 AFPPVVEGKSCILADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAEL 357
+P + G+ + ++GSGKTL Y LP I + + L G P V++LAPT EL
Sbjct: 158 GWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLG----PGDGPIVLVLAPTREL 213
Query: 358 ASQVLSNCRSLSKCGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQ 417
A Q+ + K R+ V GG + Q+ +L GV+V IATPGR + +++ G
Sbjct: 214 AVQIQAEITKFGKSS-RIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDMLEAGKTN 272
Query: 418 LINLRCAILDEVDILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPD- 476
L + +LDE D + D FE ++ +I Q +AT P E+ + D
Sbjct: 273 LRRVTYLVLDEADRML-DMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLAHDFLHDY 331
Query: 477 CKVVMG----PGMHRISPGLE 493
+V +G HRI+ +E
Sbjct: 332 IQVYIGSQDLSANHRITQIVE 352
>sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dbp2
PE=3 SV=2
Length = 547
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 13/248 (5%)
Query: 253 KQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCIL 310
+++H+ + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+ +
Sbjct: 104 RKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVG 163
Query: 311 ADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSK 370
++GSGKTL Y LP I + + L + P V+ILAPT ELA Q+ + K
Sbjct: 164 IAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLILAPTRELAVQIQAEISKFGK 219
Query: 371 CGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVD 430
R+ V GG + Q+ +L GV+V IATPGR + +++ G L + +LDE D
Sbjct: 220 SS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEAD 278
Query: 431 ILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEIYNKLVEVFPD-CKVVMG----PGM 485
+ D FE ++ ++S Q +AT P E+ + D +V +G
Sbjct: 279 RML-DMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVNIGSMDLSAN 337
Query: 486 HRISPGLE 493
HRI+ +E
Sbjct: 338 HRITQIVE 345
>sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp2 PE=3 SV=1
Length = 565
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 8/216 (3%)
Query: 253 KQRHKYSADGDFFSR--KSFKELGCSDYMIESLKRQNFLRPSQIQAMAFPPVVEGKSCIL 310
+++H+ + G R ++F E G Y++ +K Q F RP+ IQ+ +P + G+ +
Sbjct: 120 RKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVG 179
Query: 311 ADQSGSGKTLAYLLPVIQRLRQEELQGLSKSTSGSPRVVILAPTAELASQVLSNCRSLSK 370
++GSGKTL Y LP I + + L + P V+ILAPT ELA Q+ + K
Sbjct: 180 IAETGSGKTLTYCLPAIVHINAQPLL----APGDGPIVLILAPTRELAVQIQAEISKFGK 235
Query: 371 CGVPFRSMVVTGGFRQKTQLENLQEGVDVLIATPGRFMFLIKEGILQLINLRCAILDEVD 430
R+ V GG + Q+ +L GV+V IATPGR + +++ G L + +LDE D
Sbjct: 236 SS-RIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEAD 294
Query: 431 ILFNDEDFEVALQSLISSSPVTAQYLFVTATLPVEI 466
+ D FE ++ +IS Q +AT P E+
Sbjct: 295 RML-DMGFEPQIRKIISQIRPDRQTCMWSATWPKEV 329
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,790,596
Number of Sequences: 539616
Number of extensions: 9631395
Number of successful extensions: 34223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 30502
Number of HSP's gapped (non-prelim): 1575
length of query: 540
length of database: 191,569,459
effective HSP length: 122
effective length of query: 418
effective length of database: 125,736,307
effective search space: 52557776326
effective search space used: 52557776326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)