Query 009215
Match_columns 540
No_of_seqs 125 out of 700
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 21:26:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009215.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009215hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.6 0.003 1E-07 62.4 19.1 107 277-406 72-180 (261)
2 3dtn_A Putative methyltransfer 96.5 0.022 7.4E-07 53.6 12.1 176 265-489 33-210 (234)
3 3dh0_A SAM dependent methyltra 96.1 0.23 7.8E-06 45.9 16.5 113 265-403 27-141 (219)
4 3bkx_A SAM-dependent methyltra 96.1 0.42 1.4E-05 45.8 18.9 131 265-412 33-167 (275)
5 3dlc_A Putative S-adenosyl-L-m 96.0 0.12 4.1E-06 47.3 13.8 115 263-404 32-147 (219)
6 1vl5_A Unknown conserved prote 95.9 0.18 6.1E-06 48.2 15.1 109 266-403 28-138 (260)
7 3mgg_A Methyltransferase; NYSG 95.3 0.31 1.1E-05 46.9 14.3 102 275-403 37-140 (276)
8 3ujc_A Phosphoethanolamine N-m 95.0 0.3 1E-05 46.2 13.1 120 254-403 34-157 (266)
9 3dp7_A SAM-dependent methyltra 94.9 0.3 1E-05 49.8 13.7 119 266-407 170-290 (363)
10 2aot_A HMT, histamine N-methyl 94.9 1 3.4E-05 44.1 17.0 116 274-403 51-170 (292)
11 2r3s_A Uncharacterized protein 94.8 0.49 1.7E-05 46.9 14.8 119 265-408 153-275 (335)
12 3f4k_A Putative methyltransfer 94.8 0.63 2.1E-05 44.0 14.7 127 250-403 20-148 (257)
13 4a6d_A Hydroxyindole O-methylt 94.7 0.17 5.8E-06 51.7 11.3 160 263-490 167-331 (353)
14 1xxl_A YCGJ protein; structura 94.2 2.1 7.1E-05 40.4 16.9 110 265-403 11-122 (239)
15 3sm3_A SAM-dependent methyltra 94.2 0.34 1.2E-05 44.8 11.1 104 276-403 31-139 (235)
16 3jwg_A HEN1, methyltransferase 94.0 0.28 9.7E-06 45.4 10.2 122 265-409 19-145 (219)
17 3h2b_A SAM-dependent methyltra 93.7 0.31 1.1E-05 44.5 9.7 98 276-404 42-140 (203)
18 3mcz_A O-methyltransferase; ad 93.6 2.1 7.3E-05 42.8 16.5 119 266-407 169-290 (352)
19 1qzz_A RDMB, aclacinomycin-10- 93.4 1.2 4.1E-05 44.9 14.4 113 265-405 172-288 (374)
20 1tw3_A COMT, carminomycin 4-O- 93.3 1.7 5.9E-05 43.6 15.4 114 265-406 173-290 (360)
21 2ip2_A Probable phenazine-spec 93.0 1.2 4.2E-05 44.2 13.5 113 265-406 158-274 (334)
22 3jwh_A HEN1; methyltransferase 92.9 0.64 2.2E-05 43.0 10.6 118 266-406 20-142 (217)
23 3vc1_A Geranyl diphosphate 2-C 92.9 1.2 4E-05 44.1 13.0 110 265-403 106-219 (312)
24 1xtp_A LMAJ004091AAA; SGPP, st 92.5 2 7E-05 40.2 13.7 113 265-404 83-196 (254)
25 3hnr_A Probable methyltransfer 92.5 0.62 2.1E-05 42.9 9.8 43 265-316 35-77 (220)
26 1x19_A CRTF-related protein; m 92.4 1 3.5E-05 45.5 12.2 118 264-407 179-298 (359)
27 3ocj_A Putative exported prote 92.0 1.4 4.9E-05 43.2 12.4 106 276-403 119-225 (305)
28 3m70_A Tellurite resistance pr 91.7 2 7E-05 41.4 13.0 111 265-403 110-221 (286)
29 3gwz_A MMCR; methyltransferase 91.7 2.2 7.5E-05 43.5 13.8 116 265-408 192-311 (369)
30 3i53_A O-methyltransferase; CO 91.6 1.9 6.5E-05 42.9 13.0 111 267-405 161-275 (332)
31 3kkz_A Uncharacterized protein 91.4 2.4 8.2E-05 40.5 13.0 129 248-403 18-148 (267)
32 3htx_A HEN1; HEN1, small RNA m 91.4 0.81 2.8E-05 52.9 10.9 124 266-408 712-838 (950)
33 3l8d_A Methyltransferase; stru 91.3 1.9 6.3E-05 40.2 11.8 97 276-404 54-152 (242)
34 3hem_A Cyclopropane-fatty-acyl 90.2 2.8 9.6E-05 40.9 12.5 115 265-403 62-181 (302)
35 2xvm_A Tellurite resistance pr 90.2 4.2 0.00014 36.3 12.7 112 264-403 21-134 (199)
36 3p9c_A Caffeic acid O-methyltr 89.7 1.7 5.7E-05 44.5 10.6 108 264-405 189-299 (364)
37 2o57_A Putative sarcosine dime 89.6 3.6 0.00012 39.8 12.6 117 265-407 68-190 (297)
38 1kpg_A CFA synthase;, cyclopro 89.3 3 0.0001 40.2 11.7 111 266-403 55-166 (287)
39 3lst_A CALO1 methyltransferase 89.1 2.3 8E-05 42.7 11.2 110 265-405 174-287 (348)
40 3e23_A Uncharacterized protein 89.0 4 0.00014 37.2 11.8 96 276-404 44-140 (211)
41 3dli_A Methyltransferase; PSI- 88.9 1.2 4.3E-05 41.8 8.4 94 276-403 42-138 (240)
42 3bus_A REBM, methyltransferase 87.9 5 0.00017 38.1 12.1 113 265-403 51-164 (273)
43 3reo_A (ISO)eugenol O-methyltr 87.7 2.6 8.9E-05 43.0 10.5 108 265-406 192-302 (368)
44 1nkv_A Hypothetical protein YJ 87.3 4.8 0.00017 37.7 11.5 111 264-403 25-138 (256)
45 3ege_A Putative methyltransfer 87.1 1.4 4.7E-05 42.3 7.6 112 265-411 24-137 (261)
46 3g5l_A Putative S-adenosylmeth 86.5 6.3 0.00022 37.0 11.8 112 263-404 32-144 (253)
47 3ou2_A SAM-dependent methyltra 86.3 3.8 0.00013 37.2 9.9 108 264-403 34-144 (218)
48 4htf_A S-adenosylmethionine-de 85.9 6.5 0.00022 37.8 11.8 111 267-404 61-172 (285)
49 2vdw_A Vaccinia virus capping 85.5 5.1 0.00017 39.9 11.1 111 276-403 49-167 (302)
50 1fp1_D Isoliquiritigenin 2'-O- 85.2 3.9 0.00013 41.5 10.3 107 265-405 198-307 (372)
51 1y8c_A S-adenosylmethionine-de 85.2 4.2 0.00014 37.6 9.7 103 275-404 37-141 (246)
52 3ofk_A Nodulation protein S; N 84.8 8.8 0.0003 34.9 11.7 111 266-404 42-153 (216)
53 1ve3_A Hypothetical protein PH 84.6 7 0.00024 35.7 10.9 101 276-403 39-140 (227)
54 2fk8_A Methoxy mycolic acid sy 84.5 7.7 0.00026 37.9 11.8 112 265-403 80-192 (318)
55 3lcc_A Putative methyl chlorid 84.4 10 0.00034 35.2 12.0 101 277-403 68-169 (235)
56 3ccf_A Cyclopropane-fatty-acyl 84.3 8.2 0.00028 37.0 11.7 106 265-404 47-153 (279)
57 2ex4_A Adrenal gland protein A 83.4 13 0.00046 34.5 12.5 102 276-403 80-183 (241)
58 3g2m_A PCZA361.24; SAM-depende 83.3 5 0.00017 39.0 9.7 111 265-404 73-189 (299)
59 3r0q_C Probable protein argini 83.1 10 0.00035 38.8 12.4 150 265-439 53-210 (376)
60 1wzn_A SAM-dependent methyltra 83.0 11 0.00038 35.2 11.7 111 267-405 33-145 (252)
61 3fzg_A 16S rRNA methylase; met 82.9 1.6 5.6E-05 41.9 5.8 102 277-405 51-152 (200)
62 3bkw_A MLL3908 protein, S-aden 82.8 12 0.00042 34.4 11.8 107 265-403 33-142 (243)
63 3d2l_A SAM-dependent methyltra 82.2 19 0.00063 33.2 12.8 108 267-404 27-136 (243)
64 3cgg_A SAM-dependent methyltra 81.9 21 0.00072 31.2 12.6 41 266-316 38-78 (195)
65 2qe6_A Uncharacterized protein 81.7 19 0.00064 35.1 13.2 133 247-403 45-194 (274)
66 4fsd_A Arsenic methyltransfera 81.5 14 0.00046 37.8 12.6 112 275-403 83-201 (383)
67 3u81_A Catechol O-methyltransf 80.9 7.6 0.00026 36.0 9.6 113 275-407 58-172 (221)
68 3g5t_A Trans-aconitate 3-methy 80.6 9.6 0.00033 37.0 10.6 107 275-403 36-147 (299)
69 2p8j_A S-adenosylmethionine-de 80.6 13 0.00045 33.4 11.0 102 277-404 25-127 (209)
70 3lcv_B Sisomicin-gentamicin re 79.3 5.3 0.00018 40.2 8.3 133 266-433 125-259 (281)
71 3p9n_A Possible methyltransfer 78.9 7.6 0.00026 34.9 8.7 110 276-410 45-158 (189)
72 3q7e_A Protein arginine N-meth 78.9 10 0.00035 38.3 10.6 105 276-404 67-172 (349)
73 2p7i_A Hypothetical protein; p 78.0 12 0.00042 34.2 10.0 105 265-403 31-139 (250)
74 1dus_A MJ0882; hypothetical pr 78.0 22 0.00075 31.1 11.3 115 264-405 41-157 (194)
75 2yxd_A Probable cobalt-precorr 77.2 10 0.00035 33.0 8.8 103 266-403 26-129 (183)
76 4e2x_A TCAB9; kijanose, tetron 77.2 2.5 8.5E-05 43.5 5.4 109 266-404 98-207 (416)
77 3gu3_A Methyltransferase; alph 77.2 53 0.0018 31.5 19.2 106 274-406 21-128 (284)
78 2zfu_A Nucleomethylin, cerebra 76.7 12 0.0004 34.1 9.4 40 266-317 57-97 (215)
79 2y1w_A Histone-arginine methyl 76.6 18 0.00062 36.4 11.6 116 264-404 39-154 (348)
80 1ri5_A MRNA capping enzyme; me 76.1 19 0.00066 34.2 11.2 107 276-404 65-173 (298)
81 4dcm_A Ribosomal RNA large sub 76.1 12 0.00042 38.4 10.3 121 263-404 210-333 (375)
82 3frh_A 16S rRNA methylase; met 75.8 6.6 0.00023 39.0 7.7 101 276-405 106-206 (253)
83 3pfg_A N-methyltransferase; N, 75.6 12 0.0004 35.4 9.3 98 276-404 51-150 (263)
84 1g6q_1 HnRNP arginine N-methyl 75.5 19 0.00066 35.9 11.4 114 266-403 29-143 (328)
85 3uwp_A Histone-lysine N-methyl 75.4 7.7 0.00026 41.4 8.6 123 264-403 162-286 (438)
86 3thr_A Glycine N-methyltransfe 75.1 7.1 0.00024 37.5 7.7 121 265-404 47-174 (293)
87 3giw_A Protein of unknown func 74.9 19 0.00065 36.0 10.9 144 245-403 44-198 (277)
88 1pjz_A Thiopurine S-methyltran 74.9 15 0.00051 33.7 9.7 33 275-316 22-54 (203)
89 3bgv_A MRNA CAP guanine-N7 met 74.7 21 0.0007 34.9 11.1 112 275-403 34-153 (313)
90 2yqz_A Hypothetical protein TT 73.8 24 0.00082 32.8 10.9 101 275-404 39-140 (263)
91 1zg3_A Isoflavanone 4'-O-methy 73.7 7.8 0.00027 38.9 8.0 43 266-315 182-226 (358)
92 2kw5_A SLR1183 protein; struct 73.7 49 0.0017 29.5 12.7 98 278-404 32-130 (202)
93 1vlm_A SAM-dependent methyltra 72.0 55 0.0019 29.8 12.9 23 470-492 165-187 (219)
94 3eey_A Putative rRNA methylase 70.7 21 0.00072 31.9 9.4 111 277-403 24-137 (197)
95 2fyt_A Protein arginine N-meth 68.6 52 0.0018 33.0 12.8 113 265-402 54-168 (340)
96 2p35_A Trans-aconitate 2-methy 68.5 12 0.00041 34.9 7.5 107 266-404 24-131 (259)
97 1fp2_A Isoflavone O-methyltran 67.8 13 0.00045 37.1 8.1 33 275-314 188-220 (352)
98 2gb4_A Thiopurine S-methyltran 67.7 27 0.00092 33.6 10.0 33 275-316 68-100 (252)
99 3hm2_A Precorrin-6Y C5,15-meth 67.0 54 0.0019 28.3 11.1 61 265-338 15-75 (178)
100 2esr_A Methyltransferase; stru 66.7 10 0.00036 33.3 6.3 109 276-410 32-143 (177)
101 2pjd_A Ribosomal RNA small sub 66.4 10 0.00035 38.1 6.9 118 263-404 184-302 (343)
102 3e8s_A Putative SAM dependent 66.4 22 0.00076 32.0 8.7 46 262-316 39-84 (227)
103 3i9f_A Putative type 11 methyl 66.0 21 0.00073 31.0 8.2 102 266-403 8-110 (170)
104 2fpo_A Methylase YHHF; structu 65.6 20 0.00068 32.8 8.3 103 277-407 56-162 (202)
105 3mq2_A 16S rRNA methyltransfer 65.2 16 0.00055 33.4 7.5 44 267-317 19-62 (218)
106 1zx0_A Guanidinoacetate N-meth 65.1 25 0.00087 32.6 9.0 106 275-403 60-168 (236)
107 3cc8_A Putative methyltransfer 65.1 38 0.0013 30.5 10.0 106 264-403 22-128 (230)
108 4hg2_A Methyltransferase type 65.0 47 0.0016 32.1 11.2 100 278-412 42-143 (257)
109 1wy7_A Hypothetical protein PH 61.8 49 0.0017 29.7 10.1 92 276-396 50-141 (207)
110 3b3j_A Histone-arginine methyl 61.0 17 0.00057 38.9 7.6 114 265-404 148-262 (480)
111 3dmg_A Probable ribosomal RNA 60.5 71 0.0024 32.8 12.1 117 264-404 216-339 (381)
112 1uwv_A 23S rRNA (uracil-5-)-me 60.1 50 0.0017 34.3 11.0 110 267-403 278-387 (433)
113 3iv6_A Putative Zn-dependent a 59.5 21 0.00071 35.1 7.5 43 265-316 35-77 (261)
114 4azs_A Methyltransferase WBDD; 59.0 11 0.00038 40.8 5.9 84 275-380 66-150 (569)
115 3e05_A Precorrin-6Y C5,15-meth 58.7 78 0.0027 28.3 10.9 110 265-403 30-140 (204)
116 2avn_A Ubiquinone/menaquinone 57.5 76 0.0026 29.7 11.0 33 275-316 54-86 (260)
117 2pxx_A Uncharacterized protein 56.0 28 0.00095 31.1 7.3 34 275-316 42-75 (215)
118 2g72_A Phenylethanolamine N-me 55.6 36 0.0012 32.6 8.4 23 470-492 233-255 (289)
119 3njr_A Precorrin-6Y methylase; 55.0 1.2E+02 0.0043 27.5 11.9 107 265-403 45-152 (204)
120 3bxo_A N,N-dimethyltransferase 54.6 1.1E+02 0.0037 27.7 11.3 99 275-404 40-140 (239)
121 3lbf_A Protein-L-isoaspartate 54.3 89 0.0031 28.0 10.5 106 266-404 68-173 (210)
122 3mti_A RRNA methylase; SAM-dep 53.9 63 0.0021 28.4 9.2 51 277-342 24-75 (185)
123 3ggd_A SAM-dependent methyltra 53.2 16 0.00055 34.0 5.3 105 276-405 57-164 (245)
124 3p2e_A 16S rRNA methylase; met 52.5 24 0.00082 33.2 6.4 35 275-316 24-58 (225)
125 2ift_A Putative methylase HI07 50.5 1E+02 0.0034 28.0 10.2 106 277-409 55-167 (201)
126 3g07_A 7SK snRNA methylphospha 49.5 16 0.00054 35.7 4.7 34 276-316 47-80 (292)
127 1nv8_A HEMK protein; class I a 48.8 58 0.002 31.7 8.8 113 277-407 125-251 (284)
128 2gs9_A Hypothetical protein TT 48.6 44 0.0015 30.0 7.4 101 267-403 29-130 (211)
129 3grz_A L11 mtase, ribosomal pr 47.4 50 0.0017 29.7 7.5 63 262-338 45-109 (205)
130 1yzh_A TRNA (guanine-N(7)-)-me 47.1 64 0.0022 29.3 8.3 113 276-406 42-157 (214)
131 4hc4_A Protein arginine N-meth 47.0 92 0.0032 32.1 10.3 100 278-402 86-186 (376)
132 2jjq_A Uncharacterized RNA met 47.0 1.4E+02 0.0049 31.0 12.0 95 277-404 292-386 (425)
133 2yxe_A Protein-L-isoaspartate 47.0 1.3E+02 0.0044 26.9 10.4 45 266-316 68-112 (215)
134 3lpm_A Putative methyltransfer 46.1 1.2E+02 0.0042 28.4 10.5 112 276-404 50-175 (259)
135 1dl5_A Protein-L-isoaspartate 45.6 1.3E+02 0.0043 29.5 10.8 110 264-404 64-174 (317)
136 3dxy_A TRNA (guanine-N(7)-)-me 44.0 33 0.0011 32.1 5.9 113 275-406 34-151 (218)
137 4dzr_A Protein-(glutamine-N5) 44.0 20 0.00067 32.1 4.1 44 267-317 21-65 (215)
138 2b3t_A Protein methyltransfera 43.6 1.1E+02 0.0036 29.2 9.6 110 275-404 109-237 (276)
139 1u2z_A Histone-lysine N-methyl 43.4 88 0.003 33.0 9.6 121 265-403 232-357 (433)
140 3tm4_A TRNA (guanine N2-)-meth 42.7 1.2E+02 0.004 30.7 10.3 108 275-403 217-329 (373)
141 3g89_A Ribosomal RNA small sub 41.7 40 0.0014 32.2 6.2 51 275-338 80-130 (249)
142 3m33_A Uncharacterized protein 39.8 1.1E+02 0.0036 28.1 8.7 31 277-316 50-80 (226)
143 2i62_A Nicotinamide N-methyltr 38.8 1E+02 0.0035 28.4 8.5 36 273-316 54-89 (265)
144 1l3i_A Precorrin-6Y methyltran 38.5 85 0.0029 27.1 7.4 56 267-337 25-80 (192)
145 1zq9_A Probable dimethyladenos 38.4 1.3E+02 0.0044 29.2 9.4 87 265-373 18-104 (285)
146 3fpf_A Mtnas, putative unchara 36.8 2.2E+02 0.0076 28.5 11.0 98 276-404 123-221 (298)
147 3fut_A Dimethyladenosine trans 36.7 81 0.0028 30.9 7.6 57 251-317 18-79 (271)
148 3b5i_A S-adenosyl-L-methionine 36.6 3.3E+02 0.011 27.9 12.6 43 275-317 52-102 (374)
149 1jsx_A Glucose-inhibited divis 36.3 51 0.0017 29.5 5.7 96 277-404 67-164 (207)
150 3tma_A Methyltransferase; thum 36.0 1.2E+02 0.0041 30.2 8.9 114 267-398 195-310 (354)
151 3tfw_A Putative O-methyltransf 35.9 72 0.0025 30.0 7.0 101 277-404 65-169 (248)
152 1ws6_A Methyltransferase; stru 35.8 50 0.0017 28.2 5.4 106 277-408 43-150 (171)
153 1vbf_A 231AA long hypothetical 32.3 2.3E+02 0.008 25.5 9.7 104 266-404 61-164 (231)
154 3q87_B N6 adenine specific DNA 29.8 56 0.0019 28.9 4.7 29 278-316 26-54 (170)
155 2nxc_A L11 mtase, ribosomal pr 29.8 88 0.003 29.6 6.5 48 277-339 122-169 (254)
156 1i1n_A Protein-L-isoaspartate 29.5 3.1E+02 0.011 24.6 10.4 45 266-316 66-112 (226)
157 2fca_A TRNA (guanine-N(7)-)-me 29.2 67 0.0023 29.5 5.3 50 275-337 38-87 (213)
158 2h1r_A Dimethyladenosine trans 29.1 1.4E+02 0.0047 29.3 7.9 44 264-316 31-74 (299)
159 3opn_A Putative hemolysin; str 28.2 1.1E+02 0.0036 29.0 6.6 57 252-317 14-71 (232)
160 2fhp_A Methylase, putative; al 28.2 1.7E+02 0.0059 25.2 7.7 109 276-409 45-158 (187)
161 1fbn_A MJ fibrillarin homologu 27.7 1.6E+02 0.0054 27.0 7.7 34 276-316 75-108 (230)
162 3id6_C Fibrillarin-like rRNA/T 27.4 3.9E+02 0.013 25.3 10.6 112 265-403 63-179 (232)
163 2ksn_A Ubiquitin domain-contai 27.4 80 0.0027 28.4 5.1 39 161-200 56-94 (137)
164 3bzb_A Uncharacterized protein 27.0 4E+02 0.014 25.4 10.7 30 277-314 81-110 (281)
165 3ntv_A MW1564 protein; rossman 26.9 81 0.0028 29.3 5.5 102 275-404 71-175 (232)
166 2a14_A Indolethylamine N-methy 25.6 2.7E+02 0.0091 26.1 9.0 40 363-403 155-195 (263)
167 2gpy_A O-methyltransferase; st 25.3 1.5E+02 0.0052 27.1 7.0 102 277-404 56-159 (233)
168 3tva_A Xylose isomerase domain 25.1 70 0.0024 30.4 4.8 56 379-434 234-289 (290)
169 3duw_A OMT, O-methyltransferas 24.8 85 0.0029 28.4 5.1 102 277-405 60-167 (223)
170 3gru_A Dimethyladenosine trans 24.4 5.1E+02 0.018 25.4 12.3 56 253-317 23-83 (295)
171 3dr5_A Putative O-methyltransf 24.4 1.4E+02 0.0048 27.7 6.7 111 269-404 50-162 (221)
172 1xdz_A Methyltransferase GIDB; 23.8 1.2E+02 0.0042 28.0 6.2 101 276-404 71-173 (240)
173 3ftd_A Dimethyladenosine trans 23.7 60 0.002 31.2 4.0 44 265-316 21-64 (249)
174 2ozv_A Hypothetical protein AT 23.1 2.5E+02 0.0086 26.5 8.4 116 274-404 35-169 (260)
175 2h00_A Methyltransferase 10 do 23.0 1.2E+02 0.0039 28.3 5.8 51 275-338 65-115 (254)
176 1qam_A ERMC' methyltransferase 22.8 61 0.0021 30.7 3.8 43 265-316 20-62 (244)
177 2pt6_A Spermidine synthase; tr 22.7 3.1E+02 0.011 27.1 9.2 33 277-316 118-150 (321)
178 3gdh_A Trimethylguanosine synt 22.3 1.4E+02 0.0048 27.3 6.1 54 275-343 78-133 (241)
179 1o9g_A RRNA methyltransferase; 22.0 82 0.0028 29.4 4.5 46 267-317 43-88 (250)
180 2qm3_A Predicted methyltransfe 21.8 3.4E+02 0.012 27.1 9.5 97 277-399 174-271 (373)
181 3mb5_A SAM-dependent methyltra 21.5 1.7E+02 0.0057 27.1 6.6 61 266-338 84-144 (255)
182 1jg1_A PIMT;, protein-L-isoasp 20.2 4.5E+02 0.015 23.9 9.3 106 266-404 82-188 (235)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.65 E-value=0.003 Score=62.38 Aligned_cols=107 Identities=15% Similarity=0.152 Sum_probs=66.2
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-+|+|+|.|.| .+...|+.+- ++|..+||||+.+.. .++..-++++..+.....+++...+.
T Consensus 72 ~~vLDlGcGtG----~~~~~la~~~-~~~~~~v~gvD~s~~------ml~~A~~~~~~~~~~~~v~~~~~D~~------- 133 (261)
T 4gek_A 72 TQVYDLGCSLG----AATLSVRRNI-HHDNCKIIAIDNSPA------MIERCRRHIDAYKAPTPVDVIEGDIR------- 133 (261)
T ss_dssp CEEEEETCTTT----HHHHHHHHTC-CSSSCEEEEEESCHH------HHHHHHHHHHTSCCSSCEEEEESCTT-------
T ss_pred CEEEEEeCCCC----HHHHHHHHhc-CCCCCEEEEEECCHH------HHHHHHHHHHhhccCceEEEeecccc-------
Confidence 47999999999 4555666542 346789999998642 23444456667775545555543221
Q ss_pred ccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE-Eeec
Q 009215 357 NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTV-VEQD 406 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvl-vEqe 406 (540)
++...+-.+ |-+.+.||++... .+..+|+.| |.|+|.-..+ +|.-
T Consensus 134 ~~~~~~~d~--v~~~~~l~~~~~~---~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 134 DIAIENASM--VVLNFTLQFLEPS---ERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp TCCCCSEEE--EEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ccccccccc--ceeeeeeeecCch---hHhHHHHHHHHHcCCCcEEEEEecc
Confidence 122222233 4455678888643 467788876 7799987664 4543
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.52 E-value=0.022 Score=53.62 Aligned_cols=176 Identities=16% Similarity=0.139 Sum_probs=89.9
Q ss_pred HHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEE
Q 009215 265 EAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSM 343 (540)
Q Consensus 265 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~ 343 (540)
+.+++.+. ..+.-.|+|+|.|.|. +...|+.+- |..++|||+.+... .+...+.+...+ ++. +
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s~~~------~~~a~~~~~~~~-~~~--~ 96 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDMSEKM------LEIAKNRFRGNL-KVK--Y 96 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEESCHHH------HHHHHHHTCSCT-TEE--E
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEECCHHH------HHHHHHhhccCC-CEE--E
Confidence 56666665 4456899999999994 344444432 45799999986421 222233333333 333 3
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCCCCchhHHHHHHH
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVEQDANHNGPFFLGRFLESL 422 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvEqea~hnsp~F~~RF~EAL 422 (540)
+...+. .+ ... +..=+|-|...|||+.+. .+..+|+.+ +.|+|.-.+++-.-...+.+.+...+...
T Consensus 97 ~~~d~~--~~-----~~~-~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~- 164 (234)
T 3dtn_A 97 IEADYS--KY-----DFE-EKYDMVVSALSIHHLEDE---DKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTI- 164 (234)
T ss_dssp EESCTT--TC-----CCC-SCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHH-
T ss_pred EeCchh--cc-----CCC-CCceEEEEeCccccCCHH---HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHH-
Confidence 332111 11 111 334445556788998543 344566665 67899877755322222232222222211
Q ss_pred HHHHHHHHhhhhcCCCCchHHHHHHHHHHHHHHHHHHhhcCCCccccccchHHHHHHHhcCCCeeec
Q 009215 423 HYYSAIFDSLEASLPRNSPLRMNIERLHFAEEIRNIVAYEGSDRIERHERAHQWRRQLGRAGFQLVG 489 (540)
Q Consensus 423 ~yYsAlFDSLea~lp~~s~eR~~iE~~~lg~eI~NiVAcEG~~RvERhE~~~~Wr~rm~rAGF~~vp 489 (540)
+...+ .. .+ -... +|.+..... ...+.-+.+.|+..|+.|||+.+.
T Consensus 165 --~~~~~---~~-~~-~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~ 210 (234)
T 3dtn_A 165 --WRQYV---EN-SG-LTEE-----------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVS 210 (234)
T ss_dssp --HHHHH---HT-SS-CCHH-----------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEE
T ss_pred --HHHHH---Hh-cC-CCHH-----------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCcee
Confidence 11111 11 11 1111 111111111 234556788999999999999875
No 3
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=96.12 E-value=0.23 Score=45.89 Aligned_cols=113 Identities=12% Similarity=0.220 Sum_probs=65.6
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFSM 343 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~~ 343 (540)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +|..++|||+.+.. ..+...+.++..+++ +.|..
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s~~------~~~~a~~~~~~~~~~~~~~~~ 94 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQEE------MVNYAWEKVNKLGLKNVEVLK 94 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESCHH------HHHHHHHHHHHHTCTTEEEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECCHH------HHHHHHHHHHHcCCCcEEEEe
Confidence 556666655556689999999996444444333 35569999998642 233344455555654 44433
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
.. +. .+....+..=+|-+...+||+.+ ...+|+. .+.|+|.-.+++
T Consensus 95 ~d--~~-------~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 95 SE--EN-------KIPLPDNTVDFIFMAFTFHELSE-----PLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp CB--TT-------BCSSCSSCEEEEEEESCGGGCSS-----HHHHHHHHHHHEEEEEEEEE
T ss_pred cc--cc-------cCCCCCCCeeEEEeehhhhhcCC-----HHHHHHHHHHHhCCCeEEEE
Confidence 22 11 12233343445556677788742 3455555 577999876655
No 4
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.10 E-value=0.42 Score=45.81 Aligned_cols=131 Identities=13% Similarity=0.066 Sum_probs=68.4
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
..|++.+.-...-+|+|+|.|.|. +...|+.+- .|..++|||+.+..........+...++++..++.-..+++
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~ 106 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGD----LSAVLADQV--GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVH 106 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHHHHH--CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEE
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCH----HHHHHHHHh--CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEE
Confidence 356666654455689999999984 334444432 24569999998753000000122344455555543223333
Q ss_pred eccCCCCCCcccccCccCC--ceEEEEeccccccccccccchHHHHHHHHHhcCC--cEEEEEeecCCCCCC
Q 009215 345 SEPVTPSLLTRENLDLREG--EALFVNSIMHLHKYVKESRGSLKAILQAIKRLNP--TLLTVVEQDANHNGP 412 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~--EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~P--kvvvlvEqea~hnsp 412 (540)
... .+....+...++ ++|+ |...|||+.+. +.+++.++.|.| ..+++.+.....+.+
T Consensus 107 ~~d----~~~~~~~~~~~~~fD~v~--~~~~l~~~~~~-----~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 107 FNT----NLSDDLGPIADQHFDRVV--LAHSLWYFASA-----NALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp CSC----CTTTCCGGGTTCCCSEEE--EESCGGGSSCH-----HHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred ECC----hhhhccCCCCCCCEEEEE--EccchhhCCCH-----HHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 221 011111222222 4444 55566787542 348889998887 456666666554433
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.99 E-value=0.12 Score=47.29 Aligned_cols=115 Identities=16% Similarity=0.145 Sum_probs=68.2
Q ss_pred hhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEE
Q 009215 263 ANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFS 342 (540)
Q Consensus 263 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~ 342 (540)
..+.|++.+.-... +|+|+|.|.|. +...|+.+ |..++|||+.+.. ..+...+.++..++.-...
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s~~------~~~~a~~~~~~~~~~~~~~ 96 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFSKH------MNEIALKNIADANLNDRIQ 96 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESCHH------HHHHHHHHHHHTTCTTTEE
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECCHH------HHHHHHHHHHhccccCceE
Confidence 34566666665555 99999999994 55556655 4589999998642 2334455566666542233
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
++...+. .+.+.++..=+|-+...|||+.+ ...+|+. .+.|+|.-.+++.
T Consensus 97 ~~~~d~~-------~~~~~~~~~D~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 97 IVQGDVH-------NIPIEDNYADLIVSRGSVFFWED-----VATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EEECBTT-------BCSSCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEcCHH-------HCCCCcccccEEEECchHhhccC-----HHHHHHHHHHhCCCCCEEEEE
Confidence 3332111 12233343444556667788732 3455555 5778998877663
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.91 E-value=0.18 Score=48.23 Aligned_cols=109 Identities=12% Similarity=0.152 Sum_probs=63.3
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEEEe
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFSMI 344 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~~v 344 (540)
.|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+.. ..+...+.++..+++ +.|.
T Consensus 28 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s~~------~l~~a~~~~~~~~~~~v~~~-- 90 (260)
T 1vl5_A 28 KLMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLTED------ILKVARAFIEGNGHQQVEYV-- 90 (260)
T ss_dssp HHHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESCHH------HHHHHHHHHHHTTCCSEEEE--
T ss_pred HHHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCCHH------HHHHHHHHHHhcCCCceEEE--
Confidence 34455544455689999999884 556677653 2 8999998642 223334455555644 4443
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHH-HHHhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQ-AIKRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~-~Ir~L~Pkvvvlv 403 (540)
...+ ..+.+.++..=+|-|...|||+.+ + ..+|+ ..|.|+|.-.+++
T Consensus 91 ~~d~-------~~l~~~~~~fD~V~~~~~l~~~~d----~-~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 91 QGDA-------EQMPFTDERFHIVTCRIAAHHFPN----P-ASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp ECCC--------CCCSCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEE
T ss_pred EecH-------HhCCCCCCCEEEEEEhhhhHhcCC----H-HHHHHHHHHHcCCCCEEEE
Confidence 2211 112233344445556678899854 3 34555 4578899876655
No 7
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=95.27 E-value=0.31 Score=46.86 Aligned_cols=102 Identities=17% Similarity=0.217 Sum_probs=59.9
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEEEeeccCCCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFSMISEPVTPSLL 353 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~~v~~~~~~~~l 353 (540)
..-+|+|+|.|.| .+...|+.+. |..++|||+.+.. ..+...+.+...+++ +.|.... +
T Consensus 37 ~~~~vLDiG~G~G----~~~~~l~~~~---~~~~v~~vD~s~~------~~~~a~~~~~~~~~~~~~~~~~d--~----- 96 (276)
T 3mgg_A 37 PGAKVLEAGCGIG----AQTVILAKNN---PDAEITSIDISPE------SLEKARENTEKNGIKNVKFLQAN--I----- 96 (276)
T ss_dssp TTCEEEETTCTTS----HHHHHHHHHC---TTSEEEEEESCHH------HHHHHHHHHHHTTCCSEEEEECC--G-----
T ss_pred CCCeEEEecCCCC----HHHHHHHHhC---CCCEEEEEECCHH------HHHHHHHHHHHcCCCCcEEEEcc--c-----
Confidence 4468999999998 3445555542 4469999998642 223344455555653 4433321 1
Q ss_pred cccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 354 TRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 354 ~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
..+...++..=+|-+...|||+.+. +.+|+.+ +.|+|.-++++
T Consensus 97 --~~~~~~~~~fD~v~~~~~l~~~~~~-----~~~l~~~~~~L~pgG~l~~ 140 (276)
T 3mgg_A 97 --FSLPFEDSSFDHIFVCFVLEHLQSP-----EEALKSLKKVLKPGGTITV 140 (276)
T ss_dssp --GGCCSCTTCEEEEEEESCGGGCSCH-----HHHHHHHHHHEEEEEEEEE
T ss_pred --ccCCCCCCCeeEEEEechhhhcCCH-----HHHHHHHHHHcCCCcEEEE
Confidence 1122334445556667778888542 3566655 67899876655
No 8
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=95.00 E-value=0.3 Score=46.19 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=67.3
Q ss_pred CcchhhhHhhhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHH
Q 009215 254 PYISFGFMAANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDAT 333 (540)
Q Consensus 254 P~~kfahftANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~ 333 (540)
.++.-+.....+.+++.+.-...-+|+|+|.|.|. +...|+.+-+ .++|||+.+.. ..+.|+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~s~~----------~~~~a~ 95 (266)
T 3ujc_A 34 NYISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDICSN----------IVNMAN 95 (266)
T ss_dssp TCCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESCHH----------HHHHHH
T ss_pred CccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeCCHH----------HHHHHH
Confidence 44444444555777777765666799999999884 4444444322 48999998642 122222
Q ss_pred hcC---CceeEEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 334 SLG---INLEFSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 334 ~fg---l~~eF~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
+.. -++.|.... +. .+....+..=+|-+...|||+... ....+|+.+ +.|+|.-.+++
T Consensus 96 ~~~~~~~~~~~~~~d--~~-------~~~~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~~ 157 (266)
T 3ujc_A 96 ERVSGNNKIIFEAND--IL-------TKEFPENNFDLIYSRDAILALSLE---NKNKLFQKCYKWLKPTGTLLI 157 (266)
T ss_dssp HTCCSCTTEEEEECC--TT-------TCCCCTTCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhhcCCCeEEEECc--cc-------cCCCCCCcEEEEeHHHHHHhcChH---HHHHHHHHHHHHcCCCCEEEE
Confidence 222 233433322 11 112223444455566778888432 345566654 77899766544
No 9
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=94.92 E-value=0.3 Score=49.80 Aligned_cols=119 Identities=9% Similarity=0.057 Sum_probs=64.1
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.+++.+.....-+|+|+|.|.|. +...|+.+- |.+++|+++.+. ..+...+++++.++.=..+++.
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~~~~~~~~~v~~~~ 235 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLPQ-------QLEMMRKQTAGLSGSERIHGHG 235 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECHH-------HHHHHHHHHTTCTTGGGEEEEE
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCHH-------HHHHHHHHHHhcCcccceEEEE
Confidence 34454443455799999999994 445555442 567999999621 2333444555666532233333
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeecC
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQDA 407 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqea 407 (540)
.......+ .+. ..-+++ -+...||++.++ ....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 236 ~d~~~~~~---~~p-~~~D~v--~~~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 236 ANLLDRDV---PFP-TGFDAV--WMSQFLDCFSEE---EVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp CCCCSSSC---CCC-CCCSEE--EEESCSTTSCHH---HHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred ccccccCC---CCC-CCcCEE--EEechhhhCCHH---HHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 21110000 011 122444 345567887654 355677766 668997755 445433
No 10
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=94.90 E-value=1 Score=44.09 Aligned_cols=116 Identities=12% Similarity=0.094 Sum_probs=63.2
Q ss_pred CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhc-CC-ceeEEEeeccCCCC
Q 009215 274 KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSL-GI-NLEFSMISEPVTPS 351 (540)
Q Consensus 274 ~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~f-gl-~~eF~~v~~~~~~~ 351 (540)
....+|+|+|.|.|.--..+++.|+.+..+ ..+.+|||+++.. .++...++++.. ++ ++.|.+......
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~------ml~~a~~~~~~~~~~~~v~~~~~~~~~~-- 121 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAE------QIAKYKELVAKTSNLENVKFAWHKETSS-- 121 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHH------HHHHHHHHHHTCSSCTTEEEEEECSCHH--
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHH------HHHHHHHHHHhccCCCcceEEEEecchh--
Confidence 456799999999995433467777654211 1334599998642 122233334332 33 455665442111
Q ss_pred CCccc-ccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 352 LLTRE-NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 352 ~l~~~-~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
++... .....++..=+|-|...|||+.+ .+.+|+.+ |-|+|.-.+++
T Consensus 122 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~d-----~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 122 EYQSRMLEKKELQKWDFIHMIQMLYYVKD-----IPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHHTTTCCCCEEEEEEESCGGGCSC-----HHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhhccccCCCceeEEEEeeeeeecCC-----HHHHHHHHHHHcCCCcEEEE
Confidence 11000 00012344446778888999854 34566665 56799976654
No 11
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=94.84 E-value=0.49 Score=46.86 Aligned_cols=119 Identities=17% Similarity=0.191 Sum_probs=67.6
Q ss_pred HHHHhhhcC--CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEE
Q 009215 265 EAIRQAAQG--KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFS 342 (540)
Q Consensus 265 qAILEA~~g--~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~ 342 (540)
+.|++.+.. .+..+|+|+|.|.|. +...|+.+- |..++|+++.+ .. .+...+.+...++.=..+
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-~~------~~~a~~~~~~~~~~~~v~ 218 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-SV------LEVAKENARIQGVASRYH 218 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-HH------HHHHHHHHHHHTCGGGEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-HH------HHHHHHHHHhcCCCcceE
Confidence 467777765 667899999999994 444555442 45799999986 32 222333444555542233
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeecCC
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTL-LTVVEQDAN 408 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkv-vvlvEqea~ 408 (540)
++...+. . ..+..+ .=+|-+...||++.++ ....+|+.+ +.|+|.- ++++|...+
T Consensus 219 ~~~~d~~--~-----~~~~~~-~D~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 219 TIAGSAF--E-----VDYGND-YDLVLLPNFLHHFDVA---TCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEESCTT--T-----SCCCSC-EEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred EEecccc--c-----CCCCCC-CcEEEEcchhccCCHH---HHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 3332111 0 112122 3344556677887543 345666665 6689987 556665443
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=94.77 E-value=0.63 Score=43.99 Aligned_cols=127 Identities=15% Similarity=0.039 Sum_probs=71.1
Q ss_pred HhcCCcchhhhHhhhHHHHhhhcC-CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHH
Q 009215 250 YQTTPYISFGFMAANEAIRQAAQG-KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPV 328 (540)
Q Consensus 250 ~e~sP~~kfahftANqAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L 328 (540)
|+..+-..-.+......+++.+.+ ...-+|+|+|.|.|. +...|+.+. |. ++|||+.+.. ..+..
T Consensus 20 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~-~v~~vD~s~~------~~~~a 85 (257)
T 3f4k_A 20 FKLLKRQGPGSPEATRKAVSFINELTDDAKIADIGCGTGG----QTLFLADYV---KG-QITGIDLFPD------FIEIF 85 (257)
T ss_dssp HTTSSCSSSCCHHHHHHHHTTSCCCCTTCEEEEETCTTSH----HHHHHHHHC---CS-EEEEEESCHH------HHHHH
T ss_pred HcCccccCCCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCH----HHHHHHHhC---CC-eEEEEECCHH------HHHHH
Confidence 444444444444445556666643 234589999999984 444455443 22 9999998642 23345
Q ss_pred HHHHHhcCCceeEEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 329 LHDATSLGINLEFSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 329 ~~~a~~fgl~~eF~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.+.++..|++-...++...+. .+...++..=+|-|...+||+ + .+.+|+.+ +.|+|.-.+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~d~~-------~~~~~~~~fD~v~~~~~l~~~-~-----~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 86 NENAVKANCADRVKGITGSMD-------NLPFQNEELDLIWSEGAIYNI-G-----FERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp HHHHHHTTCTTTEEEEECCTT-------SCSSCTTCEEEEEEESCSCCC-C-----HHHHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHcCCCCceEEEECChh-------hCCCCCCCEEEEEecChHhhc-C-----HHHHHHHHHHHcCCCcEEEE
Confidence 556667776522333332221 122223444455566677887 2 34566655 56899877655
No 13
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.74 E-value=0.17 Score=51.68 Aligned_cols=160 Identities=18% Similarity=0.235 Sum_probs=86.9
Q ss_pred hhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC-CceeE
Q 009215 263 ANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG-INLEF 341 (540)
Q Consensus 263 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg-l~~eF 341 (540)
..+.|++++.-...-+|||+|-|.|. +..+|+.+- |.+|+|..+.|.- .+...+.+..-+ =.++|
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp~v-------~~~a~~~~~~~~~~rv~~ 232 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIPEV-------VWTAKQHFSFQEEEQIDF 232 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECHHH-------HHHHHHHSCC--CCSEEE
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCHHH-------HHHHHHhhhhcccCceee
Confidence 34678888765555689999999994 556666553 6789998886431 111111111111 22444
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcE-EEEEeecCCC--CCCchhHH
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTL-LTVVEQDANH--NGPFFLGR 417 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkv-vvlvEqea~h--nsp~F~~R 417 (540)
.... . ++. .+...++ |-+...||+..++ ....+|+.+ +.|+|.- ++++|.-.+. ..|.+
T Consensus 233 ~~gD--~----~~~---~~~~~D~--~~~~~vlh~~~d~---~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~--- 295 (353)
T 4a6d_A 233 QEGD--F----FKD---PLPEADL--YILARVLHDWADG---KCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL--- 295 (353)
T ss_dssp EESC--T----TTS---CCCCCSE--EEEESSGGGSCHH---HHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH---
T ss_pred ecCc--c----ccC---CCCCceE--EEeeeecccCCHH---HHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH---
Confidence 3321 1 110 1222344 4445567887664 345666665 6799976 4455643332 22211
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCchHHHHHHHHHHHHHHHHHHhhcCCCccccccchHHHHHHHhcCCCeeecC
Q 009215 418 FLESLHYYSAIFDSLEASLPRNSPLRMNIERLHFAEEIRNIVAYEGSDRIERHERAHQWRRQLGRAGFQLVGL 490 (540)
Q Consensus 418 F~EAL~yYsAlFDSLea~lp~~s~eR~~iE~~~lg~eI~NiVAcEG~~RvERhE~~~~Wr~rm~rAGF~~vpl 490 (540)
.++|| |.=.+.+.|.+|. .++|+..++.|||+.+.+
T Consensus 296 --------~~~~d------------------------l~ml~~~~g~ert-----~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 --------TQLYS------------------------LNMLVQTEGQERT-----PTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp --------HHHHH------------------------HHHHHSSSCCCCC-----HHHHHHHHHHHTCEEEEE
T ss_pred --------HHHHH------------------------HHHHHhCCCcCCC-----HHHHHHHHHHCCCceEEE
Confidence 11111 1011334566663 578999999999988754
No 14
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=94.23 E-value=2.1 Score=40.36 Aligned_cols=110 Identities=8% Similarity=0.126 Sum_probs=63.2
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFSM 343 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~~ 343 (540)
.-+++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+.+.. ..+...+.++..+++ +.|
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s~~------~~~~a~~~~~~~~~~~v~~-- 73 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDATKE------MVEVASSFAQEKGVENVRF-- 73 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESCHH------HHHHHHHHHHHHTCCSEEE--
T ss_pred chHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECCHH------HHHHHHHHHHHcCCCCeEE--
Confidence 344555555566789999999984 455666552 2 8999998642 123334445555543 443
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
+...+. .+...++..=+|-|...+||+.+ + ..+|+. .+.|+|.-.+++
T Consensus 74 ~~~d~~-------~~~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 74 QQGTAE-------SLPFPDDSFDIITCRYAAHHFSD----V-RKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EECBTT-------BCCSCTTCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEE
T ss_pred Eecccc-------cCCCCCCcEEEEEECCchhhccC----H-HHHHHHHHHHcCCCcEEEE
Confidence 332111 12233344445556677888753 3 345554 578899876655
No 15
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=94.18 E-value=0.34 Score=44.82 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=57.9
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc----eeEEEeeccCCCC
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN----LEFSMISEPVTPS 351 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~----~eF~~v~~~~~~~ 351 (540)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.+...+++ -..+++...+.
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~-- 93 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G---YSVTGIDINSE------AIRLAETAARSPGLNQKTGGKAEFKVENAS-- 93 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHTTCCSCCSSSSCEEEEEECCTT--
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C---CeEEEEECCHH------HHHHHHHHHHhcCCccccCcceEEEEeccc--
Confidence 3479999999984 45556655 2 38999998642 122333344444441 12333332111
Q ss_pred CCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 352 LLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 352 ~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.+....+..=+|-+...|||+.+. ..+..+|+.+ +.|+|.-.+++
T Consensus 94 -----~~~~~~~~~D~v~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 94 -----SLSFHDSSFDFAVMQAFLTSVPDP--KERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp -----SCCSCTTCEEEEEEESCGGGCCCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----ccCCCCCceeEEEEcchhhcCCCH--HHHHHHHHHHHHHcCCCeEEEE
Confidence 122223434445556778888653 3455677765 67899876644
No 16
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=94.02 E-value=0.28 Score=45.44 Aligned_cols=122 Identities=12% Similarity=0.129 Sum_probs=67.6
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCce----e
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINL----E 340 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~----e 340 (540)
+.|++.+.....-.|+|+|.|.|. +...|+.+. |..++|||+.+.. ..+...+.+...+++- .
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~~~~ 85 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVSYS------VLERAKDRLKIDRLPEMQRKR 85 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESCHH------HHHHHHHHHTGGGSCHHHHTT
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECCHH------HHHHHHHHHHhhccccccCcc
Confidence 344455544455689999999994 566666652 4579999998642 1223333444434321 2
Q ss_pred EEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCC
Q 009215 341 FSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVEQDANH 409 (540)
Q Consensus 341 F~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvEqea~h 409 (540)
.+++...+. .+.. ....=++ |-|...|||+.+. .+..+|+.+ +.|+|..++++.....+
T Consensus 86 v~~~~~d~~--~~~~---~~~~fD~--V~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~~i~~~~~~~ 145 (219)
T 3jwg_A 86 ISLFQSSLV--YRDK---RFSGYDA--ATVIEVIEHLDEN---RLQAFEKVLFEFTRPQTVIVSTPNKEY 145 (219)
T ss_dssp EEEEECCSS--SCCG---GGTTCSE--EEEESCGGGCCHH---HHHHHHHHHHTTTCCSEEEEEEEBGGG
T ss_pred eEEEeCccc--cccc---ccCCCCE--EEEHHHHHhCCHH---HHHHHHHHHHHhhCCCEEEEEccchhh
Confidence 333332221 1110 0111233 3366778888542 356677765 67899987777665443
No 17
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=93.70 E-value=0.31 Score=44.51 Aligned_cols=98 Identities=17% Similarity=0.046 Sum_probs=55.0
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+... .+.|++..-++.|.... .
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~~----------~~~a~~~~~~~~~~~~d---------~ 93 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPATRL----------VELARQTHPSVTFHHGT---------I 93 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCCHHH----------HHHHHHHCTTSEEECCC---------G
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCCHHH----------HHHHHHhCCCCeEEeCc---------c
Confidence 4579999999994 56666666 2 289999986421 11222212233332211 1
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
..+....+..=+|-|...|||+..+ ....+|+.+ +.|+|.-.+++.
T Consensus 94 ~~~~~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 94 TDLSDSPKRWAGLLAWYSLIHMGPG---ELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp GGGGGSCCCEEEEEEESSSTTCCTT---THHHHHHHHHHTEEEEEEEEEE
T ss_pred cccccCCCCeEEEEehhhHhcCCHH---HHHHHHHHHHHHcCCCcEEEEE
Confidence 1122333444455566788898632 355566654 778998766553
No 18
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=93.59 E-value=2.1 Score=42.78 Aligned_cols=119 Identities=10% Similarity=0.074 Sum_probs=68.0
Q ss_pred HHHhhhcCCC-eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 266 AIRQAAQGKD-SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 266 AILEA~~g~~-~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
.|++.+.-.+ ..+|+|+|.|.|. +...|+.+- |.+++|+++.+. ..+...+.+...++.=..+++
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~~~~~~~~~v~~~ 234 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLPT-------TRDAARKTIHAHDLGGRVEFF 234 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECGG-------GHHHHHHHHHHTTCGGGEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECHH-------HHHHHHHHHHhcCCCCceEEE
Confidence 6777776555 7899999999995 455555432 458999998732 122334455555653223333
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeecC
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQDA 407 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqea 407 (540)
..... +... ..++.+=+|-+...||++.++ ....+|+.+ +.|+|.-.+ ++|.-.
T Consensus 235 ~~d~~----~~~~--~~~~~~D~v~~~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 235 EKNLL----DARN--FEGGAADVVMLNDCLHYFDAR---EAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp ECCTT----CGGG--GTTCCEEEEEEESCGGGSCHH---HHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred eCCcc----cCcc--cCCCCccEEEEecccccCCHH---HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 32111 1000 012224455566678888653 356677765 678997665 445433
No 19
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=93.42 E-value=1.2 Score=44.91 Aligned_cols=113 Identities=19% Similarity=0.195 Sum_probs=65.1
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF~ 342 (540)
..|++.+.-.+..+|+|+|.|.| .+...|+.+- |.+++|+++. .. ..+...+.+...++. ++|.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~-~~------~~~~a~~~~~~~~~~~~v~~~ 237 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVEL-AG------PAERARRRFADAGLADRVTVA 237 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HH------HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeC-HH------HHHHHHHHHHhcCCCCceEEE
Confidence 56777765555679999999999 4455555442 5679999987 32 123333445555653 4443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEee
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQ 405 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEq 405 (540)
... +. .. + +...=+|-+...||++.+. ....+|+.+ +.|+|.-.+ ++|.
T Consensus 238 ~~d--~~-~~-----~---~~~~D~v~~~~vl~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 238 EGD--FF-KP-----L---PVTADVVLLSFVLLNWSDE---DALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ECC--TT-SC-----C---SCCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eCC--CC-Cc-----C---CCCCCEEEEeccccCCCHH---HHHHHHHHHHHhcCCCcEEEEEec
Confidence 322 11 01 1 1113345556677887553 234566665 678998744 5565
No 20
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=93.34 E-value=1.7 Score=43.57 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=64.5
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC--ceeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI--NLEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl--~~eF~ 342 (540)
+.|++.+.-.+..+|+|+|.|.|. +...|+.+- |.+++|+++. ... .+...+.++..++ +++|.
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~-~~~------~~~a~~~~~~~~~~~~v~~~ 238 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEM-AGT------VDTARSYLKDEGLSDRVDVV 238 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC-TTH------HHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecC-HHH------HHHHHHHHHhcCCCCceEEE
Confidence 566777665556799999999994 444455432 5679999987 322 2223344555565 34443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeec
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQD 406 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqe 406 (540)
... +. .. + +...=+|-+...||++.++ ....+|+.+ +.|+|.-.+ ++|..
T Consensus 239 ~~d--~~-~~-----~---~~~~D~v~~~~vl~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 239 EGD--FF-EP-----L---PRKADAIILSFVLLNWPDH---DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ECC--TT-SC-----C---SSCEEEEEEESCGGGSCHH---HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eCC--CC-CC-----C---CCCccEEEEcccccCCCHH---HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 322 11 01 1 1123344556667887543 334666665 668998754 45544
No 21
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=93.00 E-value=1.2 Score=44.21 Aligned_cols=113 Identities=12% Similarity=0.087 Sum_probs=60.1
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC--ceeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI--NLEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl--~~eF~ 342 (540)
+.|++.+.-.. ..|+|+|.|.|. +...|+.+- |.+++|+++. .... +. ..+.+...++ .++|.
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~~--~~----a~~~~~~~~~~~~v~~~ 222 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDR-EGSL--GV----ARDNLSSLLAGERVSLV 222 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEEC-TTCT--HH----HHHHTHHHHHTTSEEEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCc-HHHH--HH----HHHHHhhcCCCCcEEEe
Confidence 56667664344 899999999994 444555442 4569999998 4321 11 1122222232 24443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeec
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQD 406 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqe 406 (540)
... .. + .+. ..-++++ +...||++.++ ....+|+.+ +.|+|.-.+ ++|.-
T Consensus 223 ~~d--~~----~--~~~-~~~D~v~--~~~vl~~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 223 GGD--ML----Q--EVP-SNGDIYL--LSRIIGDLDEA---ASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp ESC--TT----T--CCC-SSCSEEE--EESCGGGCCHH---HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cCC--CC----C--CCC-CCCCEEE--EchhccCCCHH---HHHHHHHHHHHhcCCCCEEEEEEec
Confidence 221 11 1 111 1124444 55567877543 345667665 678997655 44543
No 22
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.88 E-value=0.64 Score=43.04 Aligned_cols=118 Identities=16% Similarity=0.160 Sum_probs=65.7
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCce----eE
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINL----EF 341 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~----eF 341 (540)
.|++.+.....-.|+|+|.|.|. +...|+.+. |..++|||+.+.. ..+...+.++..+++- ..
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~~~~v 86 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVSYR------SLEIAQERLDRLRLPRNQWERL 86 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESCHH------HHHHHHHHHTTCCCCHHHHTTE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECCHH------HHHHHHHHHHHhcCCcccCcce
Confidence 34444443445589999999994 555666652 3469999998642 2233344455445431 23
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeec
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVEQD 406 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvEqe 406 (540)
+++...+.. .. .....=++|+ |...|||+.+. .+..+|+.+ +.|+|..++++...
T Consensus 87 ~~~~~d~~~--~~---~~~~~fD~v~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 87 QLIQGALTY--QD---KRFHGYDAAT--VIEVIEHLDLS---RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEECCTTS--CC---GGGCSCSEEE--EESCGGGCCHH---HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEeCCccc--cc---ccCCCcCEEe--eHHHHHcCCHH---HHHHHHHHHHHHcCCCEEEEEccC
Confidence 343322211 11 1111223444 55677888432 456777766 56899987776544
No 23
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=92.85 E-value=1.2 Score=44.08 Aligned_cols=110 Identities=12% Similarity=0.016 Sum_probs=63.6
Q ss_pred HHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeE
Q 009215 265 EAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEF 341 (540)
Q Consensus 265 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF 341 (540)
+.|++.+. -...-+|+|+|.|.| .+...|+.+.+ .++|||+.+.. ..+...+.++..|+. ++|
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G----~~~~~la~~~~----~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~ 171 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRG----GSMVMAHRRFG----SRVEGVTLSAA------QADFGNRRARELRIDDHVRS 171 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTS----HHHHHHHHHHC----CEEEEEESCHH------HHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHHhccCCCCCEEEEecCCCC----HHHHHHHHHcC----CEEEEEeCCHH------HHHHHHHHHHHcCCCCceEE
Confidence 34666665 344568999999998 34445555432 48999998642 233445566667765 444
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
.... +. . +....+..=+|-+...+||+ + ...+|+. .+.|+|.-.+++
T Consensus 172 ~~~d--~~--~-----~~~~~~~fD~V~~~~~l~~~-~-----~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 172 RVCN--ML--D-----TPFDKGAVTASWNNESTMYV-D-----LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EECC--TT--S-----CCCCTTCEEEEEEESCGGGS-C-----HHHHHHHHHHHEEEEEEEEE
T ss_pred EECC--hh--c-----CCCCCCCEeEEEECCchhhC-C-----HHHHHHHHHHHcCCCcEEEE
Confidence 3322 21 1 12223333344456667877 2 4555555 478899766654
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=92.48 E-value=2 Score=40.21 Aligned_cols=113 Identities=10% Similarity=0.107 Sum_probs=60.8
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
..+++.+.....-+|+|+|.|.|. +...|+.+. ..++|||+.+... .+...+.+... -++.| +
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s~~~------~~~a~~~~~~~-~~~~~--~ 145 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGR----ITKNLLTKL----YATTDLLEPVKHM------LEEAKRELAGM-PVGKF--I 145 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTH----HHHHTHHHH----CSEEEEEESCHHH------HHHHHHHTTTS-SEEEE--E
T ss_pred HHHHHhhcccCCCEEEEECCCcCH----HHHHHHHhh----cCEEEEEeCCHHH------HHHHHHHhccC-CceEE--E
Confidence 556666655566799999999985 333444331 2379999976421 12222222221 23333 3
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
...+ ..+.+.++..=+|-|...|||+.++ ....+|+. .+.|+|.-.+++.
T Consensus 146 ~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 146 LASM-------ETATLPPNTYDLIVIQWTAIYLTDA---DFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp ESCG-------GGCCCCSSCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred EccH-------HHCCCCCCCeEEEEEcchhhhCCHH---HHHHHHHHHHHhcCCCeEEEEE
Confidence 2111 1122223333344456678888643 34555555 5788998776553
No 25
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=92.46 E-value=0.62 Score=42.93 Aligned_cols=43 Identities=16% Similarity=0.241 Sum_probs=31.4
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
+.+++.+.....-.|+|+|.|.| .+...|+.+ | .++|||+.+.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G----~~~~~l~~~--~---~~v~~vD~s~ 77 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTG----NLTNKLLLA--G---RTVYGIEPSR 77 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTS----HHHHHHHHT--T---CEEEEECSCH
T ss_pred HHHHHHhhccCCCeEEEeCCCCC----HHHHHHHhC--C---CeEEEEeCCH
Confidence 46666666556678999999999 355666665 2 4899999864
No 26
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=92.41 E-value=1 Score=45.47 Aligned_cols=118 Identities=12% Similarity=0.058 Sum_probs=67.0
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSM 343 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~ 343 (540)
.+.|++.+.-.+.-.|+|+|.|.|. +...|+.+- |.+++|+++. ... .+...+.++..+++=..++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~-~~~------~~~a~~~~~~~~~~~~v~~ 244 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNL-PGA------IDLVNENAAEKGVADRMRG 244 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEEC-GGG------HHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEec-HHH------HHHHHHHHHhcCCCCCEEE
Confidence 3577777765566799999999995 444444432 4679999998 322 2233344555555322333
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeecC
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQDA 407 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqea 407 (540)
+..... . ..+..+++++ +...||++.++ ....+|+.+ +.|+|.-.+ ++|...
T Consensus 245 ~~~d~~--~-----~~~~~~D~v~--~~~vlh~~~d~---~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 245 IAVDIY--K-----ESYPEADAVL--FCRILYSANEQ---LSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp EECCTT--T-----SCCCCCSEEE--EESCGGGSCHH---HHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred EeCccc--c-----CCCCCCCEEE--EechhccCCHH---HHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 332111 1 1122334444 45567777553 356677766 567997655 556443
No 27
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=91.98 E-value=1.4 Score=43.23 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=61.7
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-+|+|+|.|.| .+...||.+ ..|..++|||+.+.. ..+...+.++..|+.-..+++...+.
T Consensus 119 ~~~vLDiGcG~G----~~~~~la~~--~~~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~~~~d~~------ 180 (305)
T 3ocj_A 119 GCVVASVPCGWM----SELLALDYS--ACPGVQLVGIDYDPE------ALDGATRLAAGHALAGQITLHRQDAW------ 180 (305)
T ss_dssp TCEEEETTCTTC----HHHHTSCCT--TCTTCEEEEEESCHH------HHHHHHHHHTTSTTGGGEEEEECCGG------
T ss_pred CCEEEEecCCCC----HHHHHHHHh--cCCCCeEEEEECCHH------HHHHHHHHHHhcCCCCceEEEECchh------
Confidence 457999999998 345555432 235679999998642 23344555666666522333332111
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.+... +..=+|-|...+||+.+. .....+|+.+ +.|+|.-.+++
T Consensus 181 -~~~~~-~~fD~v~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 181 -KLDTR-EGYDLLTSNGLNIYEPDD--ARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp -GCCCC-SCEEEEECCSSGGGCCCH--HHHHHHHHHHHHHEEEEEEEEE
T ss_pred -cCCcc-CCeEEEEECChhhhcCCH--HHHHHHHHHHHHhcCCCeEEEE
Confidence 11122 333344456677888653 3344566665 67999888876
No 28
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=91.74 E-value=2 Score=41.41 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=65.6
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
+.+++.+.....-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.+...++++.|...
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s~~------~~~~a~~~~~~~~~~~~~~~~ 174 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHNEN------SIAFLNETKEKENLNISTALY 174 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECCHH------HHHHHHHHHHHcCCceEEEEe
Confidence 355555554466789999999994 55556665 2 38999998642 233344556666765544432
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
. +. .+.. .+..=+|-|...+||+.. ..+..+|+.+ +.|+|.-++++
T Consensus 175 d--~~-------~~~~-~~~fD~i~~~~~~~~~~~---~~~~~~l~~~~~~LkpgG~l~i 221 (286)
T 3m70_A 175 D--IN-------AANI-QENYDFIVSTVVFMFLNR---ERVPSIIKNMKEHTNVGGYNLI 221 (286)
T ss_dssp C--GG-------GCCC-CSCEEEEEECSSGGGSCG---GGHHHHHHHHHHTEEEEEEEEE
T ss_pred c--cc-------cccc-cCCccEEEEccchhhCCH---HHHHHHHHHHHHhcCCCcEEEE
Confidence 2 11 1111 232333444556788854 3466777765 77899877544
No 29
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=91.73 E-value=2.2 Score=43.46 Aligned_cols=116 Identities=16% Similarity=0.144 Sum_probs=65.8
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC--ceeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI--NLEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl--~~eF~ 342 (540)
..|++.+.-.+..+|+|+|.+.|. +...|+.+ -|.+++|+++. .. ..+...+.+.+.++ .++|.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~---~p~~~~~~~D~-~~------~~~~a~~~~~~~~l~~~v~~~ 257 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDA---FPGLRGTLLER-PP------VAEEARELLTGRGLADRCEIL 257 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH---CTTCEEEEEEC-HH------HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHH---CCCCeEEEEcC-HH------HHHHHHHhhhhcCcCCceEEe
Confidence 456777665667899999999995 44555544 25679999987 21 12333344555554 35554
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeecCC
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQDAN 408 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqea~ 408 (540)
... .. .. +.. .-+++ -+...||++.++ ....+|+.+ +.|+|.-.+ ++|.-.+
T Consensus 258 ~~d--~~-~~-----~p~-~~D~v--~~~~vlh~~~d~---~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 258 PGD--FF-ET-----IPD-GADVY--LIKHVLHDWDDD---DVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp ECC--TT-TC-----CCS-SCSEE--EEESCGGGSCHH---HHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred ccC--CC-CC-----CCC-CceEE--EhhhhhccCCHH---HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 432 11 11 111 22344 344556777553 344677776 568997655 4454433
No 30
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=91.65 E-value=1.9 Score=42.89 Aligned_cols=111 Identities=18% Similarity=0.117 Sum_probs=62.1
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeEEEe
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEFSMI 344 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF~~v 344 (540)
|++.+.-.+..+|+|+|.|.| .+...|+.+- |.+++|+++. .. ..+...+++.+.++. ++|...
T Consensus 161 ~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~-~~------~~~~a~~~~~~~~~~~~v~~~~~ 226 (332)
T 3i53_A 161 IAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDL-QG------PASAAHRRFLDTGLSGRAQVVVG 226 (332)
T ss_dssp GGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEEC-HH------HHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecC-HH------HHHHHHHhhhhcCcCcCeEEecC
Confidence 444443344579999999999 4445555442 5679999976 21 223334455555653 555443
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEee
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQ 405 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEq 405 (540)
. +. .. +.. .-++ |-|...||++.++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 227 d--~~-~~-----~p~-~~D~--v~~~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 227 S--FF-DP-----LPA-GAGG--YVLSAVLHDWDDL---SAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp C--TT-SC-----CCC-SCSE--EEEESCGGGSCHH---HHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred C--CC-CC-----CCC-CCcE--EEEehhhccCCHH---HHHHHHHHHHHhcCCCCEEEEEee
Confidence 2 11 11 111 2233 4455667887653 356677766 678997665 4444
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=91.43 E-value=2.4 Score=40.47 Aligned_cols=129 Identities=15% Similarity=0.030 Sum_probs=74.1
Q ss_pred HHHhcCCcchhhhHhhhHHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHH
Q 009215 248 LVYQTTPYISFGFMAANEAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMK 326 (540)
Q Consensus 248 ~f~e~sP~~kfahftANqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~ 326 (540)
..|+..+...-........+++.+. -...-+|+|+|.|.| .+...|+.+ |..++|||+.+.. ..+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~----~~~~v~gvD~s~~------~~~ 83 (267)
T 3kkz_A 18 DFFSNMERQGPGSPEVTLKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGH----VTGQVTGLDFLSG------FID 83 (267)
T ss_dssp HHHHTSSCSSSCCHHHHHHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTT----CSSEEEEEESCHH------HHH
T ss_pred HHHhhccccCCCCHHHHHHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhc----cCCEEEEEeCCHH------HHH
Confidence 3344444444344444455566665 234568999999988 466677776 3458999998642 233
Q ss_pred HHHHHHHhcCCceeEEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 327 PVLHDATSLGINLEFSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 327 ~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
...+.++..|++=..+++...+. .+....+..=+|-|...+||+ + ...+|+.+ +.|+|.-.+++
T Consensus 84 ~a~~~~~~~~~~~~v~~~~~d~~-------~~~~~~~~fD~i~~~~~~~~~-~-----~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 84 IFNRNARQSGLQNRVTGIVGSMD-------DLPFRNEELDLIWSEGAIYNI-G-----FERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp HHHHHHHHTTCTTTEEEEECCTT-------SCCCCTTCEEEEEESSCGGGT-C-----HHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHcCCCcCcEEEEcChh-------hCCCCCCCEEEEEEcCCceec-C-----HHHHHHHHHHHcCCCCEEEE
Confidence 45556667776522333332221 122223444455566777887 2 34556655 67899876654
No 32
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=91.37 E-value=0.81 Score=52.87 Aligned_cols=124 Identities=12% Similarity=0.113 Sum_probs=68.8
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHH--HhcCCceeEEE
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDA--TSLGINLEFSM 343 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a--~~fgl~~eF~~ 343 (540)
.|++.+.....-.|+|+|.|.| .+...|+.+ ++|.-+||||+.+... ++.+.+++.... ++.+++ ..++
T Consensus 712 ~LLelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS~em--Le~AReRLa~~lnAkr~gl~-nVef 782 (950)
T 3htx_A 712 YALKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDISPKG--LARAAKMLHVKLNKEACNVK-SATL 782 (950)
T ss_dssp HHHHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESCHHH--HHHHHHHHHHHTTTTCSSCS-EEEE
T ss_pred HHHHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECCHHH--HHHHHHHhhhccchhhcCCC-ceEE
Confidence 3444454445567999999999 566677765 4566799999986532 222222222221 122332 2333
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEeecCC
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVEQDAN 408 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvEqea~ 408 (540)
+...+. . +....+..=+|-|...|||+.+. ....+|+. .+.|+|.++++..++.+
T Consensus 783 iqGDa~--d-----Lp~~d~sFDlVV~~eVLeHL~dp---~l~~~L~eI~RvLKPG~LIISTPN~e 838 (950)
T 3htx_A 783 YDGSIL--E-----FDSRLHDVDIGTCLEVIEHMEED---QACEFGEKVLSLFHPKLLIVSTPNYE 838 (950)
T ss_dssp EESCTT--S-----CCTTSCSCCEEEEESCGGGSCHH---HHHHHHHHHHHTTCCSEEEEEECBGG
T ss_pred EECchH--h-----CCcccCCeeEEEEeCchhhCChH---HHHHHHHHHHHHcCCCEEEEEecCch
Confidence 332221 1 12222323344456778898753 34556665 68899997777665543
No 33
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=91.33 E-value=1.9 Score=40.19 Aligned_cols=97 Identities=13% Similarity=0.174 Sum_probs=54.8
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC--CceeEEEeeccCCCCCC
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG--INLEFSMISEPVTPSLL 353 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg--l~~eF~~v~~~~~~~~l 353 (540)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+.+++.+ .++.|.... +.
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~----------~~~~a~~~~~~~~~~~~~~d--~~---- 108 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT--G---YKAVGVDISEV----------MIQKGKERGEGPDLSFIKGD--LS---- 108 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHH----------HHHHHHTTTCBTTEEEEECB--TT----
T ss_pred CCeEEEEcCCCCH----HHHHHHHc--C---CeEEEEECCHH----------HHHHHHhhcccCCceEEEcc--hh----
Confidence 3489999999984 55666665 2 38999998642 222333332 333333222 11
Q ss_pred cccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 354 TRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 354 ~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
.+....+..=+|-|...|||+.+ +...+-...+.|+|.-.+++.
T Consensus 109 ---~~~~~~~~fD~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 109 ---SLPFENEQFEAIMAINSLEWTEE----PLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp ---BCSSCTTCEEEEEEESCTTSSSC----HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---cCCCCCCCccEEEEcChHhhccC----HHHHHHHHHHHhCCCeEEEEE
Confidence 12233344445556777888843 334444455788998766553
No 34
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=90.22 E-value=2.8 Score=40.90 Aligned_cols=115 Identities=5% Similarity=0.023 Sum_probs=66.6
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.. ..+...+.++..|++-..+++
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~~ 127 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLSEN------QYAHDKAMFDEVDSPRRKEVR 127 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECCHH------HHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECCHH------HHHHHHHHHHhcCCCCceEEE
Confidence 346666655556689999999884 4455555422 58999998642 233344556666765233333
Q ss_pred eccCCCCCCcccccCccCCceEEEEecccccccccc----ccchHHHHHHHH-HhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKE----SRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~e----s~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
...+ . .+ -..=++|+ +...+||+.+. .....+.+|+.+ +.|+|.-.+++
T Consensus 128 ~~d~--~-----~~-~~~fD~v~--~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 128 IQGW--E-----EF-DEPVDRIV--SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp ECCG--G-----GC-CCCCSEEE--EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred ECCH--H-----Hc-CCCccEEE--EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 3211 1 11 11223444 44667898764 234567777765 67899876655
No 35
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=90.16 E-value=4.2 Score=36.32 Aligned_cols=112 Identities=15% Similarity=0.182 Sum_probs=62.4
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFS 342 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~ 342 (540)
++.|++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+.+... .+...+.++..++ ++.|.
T Consensus 21 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~vD~s~~~------~~~a~~~~~~~~~~~~~~~ 85 (199)
T 2xvm_A 21 HSEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN--G---YDVDAWDKNAMS------IANVERIKSIENLDNLHTR 85 (199)
T ss_dssp CHHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT--T---CEEEEEESCHHH------HHHHHHHHHHHTCTTEEEE
T ss_pred cHHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC--C---CeEEEEECCHHH------HHHHHHHHHhCCCCCcEEE
Confidence 3456666654445599999999984 44556655 2 389999986421 2233344444555 44443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
... +. .+.. ++..=+|-+...+||+..+ ....+|+.+ +.|+|.-.+++
T Consensus 86 ~~d--~~-------~~~~-~~~~D~v~~~~~l~~~~~~---~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 86 VVD--LN-------NLTF-DRQYDFILSTVVLMFLEAK---TIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp ECC--GG-------GCCC-CCCEEEEEEESCGGGSCGG---GHHHHHHHHHHTEEEEEEEEE
T ss_pred Ecc--hh-------hCCC-CCCceEEEEcchhhhCCHH---HHHHHHHHHHHhcCCCeEEEE
Confidence 322 11 1112 2322233345567887532 455666665 77899876433
No 36
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=89.65 E-value=1.7 Score=44.46 Aligned_cols=108 Identities=12% Similarity=0.148 Sum_probs=59.9
Q ss_pred hHHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEE
Q 009215 264 NEAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFS 342 (540)
Q Consensus 264 NqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~ 342 (540)
...|++.+. -...-+|+|+|.|.|. +...|+.+- |.+++|+++.+. ..+.|+.. -+++|.
T Consensus 189 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----------~~~~a~~~-~~v~~~ 249 (364)
T 3p9c_A 189 TKKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---PTIKGVNFDLPH-----------VISEAPQF-PGVTHV 249 (364)
T ss_dssp HHHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-----------HHTTCCCC-TTEEEE
T ss_pred HHHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---CCCeEEEecCHH-----------HHHhhhhc-CCeEEE
Confidence 345777776 3445799999999994 444444432 567899998732 11112211 133333
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEee
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQ 405 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEq 405 (540)
... .. + . +..+++++ +...||++.++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 250 ~~D--~~----~--~--~p~~D~v~--~~~vlh~~~d~---~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 250 GGD--MF----K--E--VPSGDTIL--MKWILHDWSDQ---HCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp ECC--TT----T--C--CCCCSEEE--EESCGGGSCHH---HHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred eCC--cC----C--C--CCCCCEEE--ehHHhccCCHH---HHHHHHHHHHHHcCCCCEEEEEEe
Confidence 321 11 1 1 11234443 55567888654 455677776 668997655 4454
No 37
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=89.61 E-value=3.6 Score=39.78 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=64.3
Q ss_pred HHHHhhh----cCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCcee
Q 009215 265 EAIRQAA----QGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLE 340 (540)
Q Consensus 265 qAILEA~----~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~e 340 (540)
+.|++.+ .-...-+|+|+|.|.|..-..|.+.+ + .++|||+.+.. ..+...++++..|+.-.
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s~~------~~~~a~~~~~~~~~~~~ 133 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIAPV------QNKRNEEYNNQAGLADN 133 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESCHH------HHHHHHHHHHHHTCTTT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCCHH------HHHHHHHHHHhcCCCcc
Confidence 4455555 33445689999999985444443332 2 28999998642 12333444555565322
Q ss_pred EEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEE-EeecC
Q 009215 341 FSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTV-VEQDA 407 (540)
Q Consensus 341 F~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvl-vEqea 407 (540)
.+++...+. .+.+.++..=+|-+...|||+.+ ...+|+. .|.|+|.-.++ ++...
T Consensus 134 ~~~~~~d~~-------~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 134 ITVKYGSFL-------EIPCEDNSYDFIWSQDAFLHSPD-----KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEEECCTT-------SCSSCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEEEcCcc-------cCCCCCCCEeEEEecchhhhcCC-----HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 333332111 12233344445667777888854 3555555 47789986654 44433
No 38
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=89.31 E-value=3 Score=40.18 Aligned_cols=111 Identities=10% Similarity=0.060 Sum_probs=60.9
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+. ++|||+.+.. ..+...++++..|+.-..+++.
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~~----~v~gvd~s~~------~~~~a~~~~~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYDV----NVVGLTLSKN------QANHVQQLVANSENLRSKRVLL 120 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHCC----EEEEEESCHH------HHHHHHHHHHTCCCCSCEEEEE
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcCC----EEEEEECCHH------HHHHHHHHHHhcCCCCCeEEEE
Confidence 45555554455689999998884 45555543321 9999998642 1233444556666533333333
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
..+ .. +. ..=++|+ +...|||+..+ ....+|+. .+.|+|.-.+++
T Consensus 121 ~d~--~~-----~~-~~fD~v~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 121 AGW--EQ-----FD-EPVDRIV--SIGAFEHFGHE---RYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp SCG--GG-----CC-CCCSEEE--EESCGGGTCTT---THHHHHHHHHHHSCTTCEEEE
T ss_pred CCh--hh-----CC-CCeeEEE--EeCchhhcChH---HHHHHHHHHHHhcCCCCEEEE
Confidence 211 11 11 1223333 44567888542 34555555 477899866654
No 39
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=89.15 E-value=2.3 Score=42.75 Aligned_cols=110 Identities=12% Similarity=0.086 Sum_probs=61.0
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC--ceeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI--NLEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl--~~eF~ 342 (540)
..|++.+.-...-+|+|+|.|.|. +...|+.+- |.+++|+++.+.. .. .+.++..++ .++|.
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~~-------~~--~~~~~~~~~~~~v~~~ 237 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDRAEV-------VA--RHRLDAPDVAGRWKVV 237 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEECHHH-------HT--TCCCCCGGGTTSEEEE
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecCHHH-------hh--cccccccCCCCCeEEE
Confidence 467777765667899999999994 444454432 5789999987421 11 111122222 24443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEee
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQ 405 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEq 405 (540)
... .. . .+. .-++ |-+...||++.++ ....+|+.+ +.|+|.-.+ ++|.
T Consensus 238 ~~d--~~-~-----~~p--~~D~--v~~~~vlh~~~d~---~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 238 EGD--FL-R-----EVP--HADV--HVLKRILHNWGDE---DSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp ECC--TT-T-----CCC--CCSE--EEEESCGGGSCHH---HHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred ecC--CC-C-----CCC--CCcE--EEEehhccCCCHH---HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 322 11 1 111 2233 4445567887653 345677766 678997655 4454
No 40
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=88.99 E-value=4 Score=37.23 Aligned_cols=96 Identities=17% Similarity=0.177 Sum_probs=53.8
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|. +...|+.+ | .++|||+.+... .+...+.+ + +.|.... .
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~~------~~~a~~~~---~--~~~~~~d---------~ 94 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G---FDVDATDGSPEL------AAEASRRL---G--RPVRTML---------F 94 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T---CEEEEEESCHHH------HHHHHHHH---T--SCCEECC---------G
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C---CeEEEECCCHHH------HHHHHHhc---C--CceEEee---------e
Confidence 3479999999984 55666665 2 389999986421 11111111 2 2222211 1
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
..+. ..+..=+|-|...|||+..+ ....+|+.+ +.|+|.-++++.
T Consensus 95 ~~~~-~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 95 HQLD-AIDAYDAVWAHACLLHVPRD---ELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp GGCC-CCSCEEEEEECSCGGGSCHH---HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccCC-CCCcEEEEEecCchhhcCHH---HHHHHHHHHHHhcCCCcEEEEE
Confidence 1111 23333345567788888643 355666655 778998777664
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=88.86 E-value=1.2 Score=41.78 Aligned_cols=94 Identities=13% Similarity=0.142 Sum_probs=50.1
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+.+++. ++ ++...+
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~~----------~~~~a~~~---~~--~~~~d~------- 90 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDINED----------MIKFCEGK---FN--VVKSDA------- 90 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSCHH----------HHHHHHTT---SE--EECSCH-------
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECCHH----------HHHHHHhh---cc--eeeccH-------
Confidence 3579999999884 44566655 2 26899998642 11223222 22 222110
Q ss_pred ccc--CccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 356 ENL--DLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 356 ~~L--~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
..+ .+.++..=+|-|...|||+.+. .+..+|+.+ +.|+|.-.+++
T Consensus 91 ~~~~~~~~~~~fD~i~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 91 IEYLKSLPDKYLDGVMISHFVEHLDPE---RLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp HHHHHTSCTTCBSEEEEESCGGGSCGG---GHHHHHHHHHHHBCTTCCEEE
T ss_pred HHHhhhcCCCCeeEEEECCchhhCCcH---HHHHHHHHHHHHcCCCcEEEE
Confidence 010 1222322234456677888642 456666665 77999755544
No 42
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=87.91 E-value=5 Score=38.12 Aligned_cols=113 Identities=14% Similarity=0.177 Sum_probs=63.2
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.. ..+...++++..|+.-..+++
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~~~~ 116 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISISRP------QVNQANARATAAGLANRVTFS 116 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESCHH------HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCCHH------HHHHHHHHHHhcCCCcceEEE
Confidence 445555554455699999999884 4445554432 48999998642 123344455556654223333
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
...+. .+...++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++
T Consensus 117 ~~d~~-------~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 117 YADAM-------DLPFEDASFDAVWALESLHHMPD-----RGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp ECCTT-------SCCSCTTCEEEEEEESCTTTSSC-----HHHHHHHHHTTEEEEEEEEE
T ss_pred ECccc-------cCCCCCCCccEEEEechhhhCCC-----HHHHHHHHHHHcCCCeEEEE
Confidence 32111 12222343444556677788743 25666665 66899866544
No 43
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=87.67 E-value=2.6 Score=43.00 Aligned_cols=108 Identities=17% Similarity=0.141 Sum_probs=59.9
Q ss_pred HHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEE
Q 009215 265 EAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSM 343 (540)
Q Consensus 265 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~ 343 (540)
+.|++.+. -...-+|+|+|.|.|. +...|+.+- |.+++|+++.+. ..+.|+.. -+++|..
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-----------~~~~a~~~-~~v~~~~ 252 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLPH-----------VIQDAPAF-SGVEHLG 252 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-----------HHTTCCCC-TTEEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehHH-----------HHHhhhhc-CCCEEEe
Confidence 45677765 3445799999999994 445555442 667899998732 11112211 1333332
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEE-EEeec
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLT-VVEQD 406 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvv-lvEqe 406 (540)
.. .. + . +..++++ -+...||++.++ ....+|+.+ +.|+|.-.+ ++|.-
T Consensus 253 ~d--~~----~--~--~p~~D~v--~~~~vlh~~~~~---~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 253 GD--MF----D--G--VPKGDAI--FIKWICHDWSDE---HCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp CC--TT----T--C--CCCCSEE--EEESCGGGBCHH---HHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred cC--CC----C--C--CCCCCEE--EEechhhcCCHH---HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 21 11 1 1 1123454 344567888654 355677766 678998654 55543
No 44
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=87.26 E-value=4.8 Score=37.71 Aligned_cols=111 Identities=13% Similarity=0.085 Sum_probs=62.1
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEF 341 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF 341 (540)
-..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.. ..+...+.++..|+. ++|
T Consensus 25 ~~~l~~~~~~~~~~~VLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~------~l~~a~~~~~~~~~~~~v~~ 90 (256)
T 1nkv_A 25 YATLGRVLRMKPGTRILDLGSGSGE----MLCTWARDHG----ITGTGIDMSSL------FTAQAKRRAEELGVSERVHF 90 (256)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTTCH----HHHHHHHHTC----CEEEEEESCHH------HHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHhcC----CeEEEEeCCHH------HHHHHHHHHHhcCCCcceEE
Confidence 3445555544445689999999995 3344444332 27899998642 233444556666754 555
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.... +. .+ .. ++..=+|-|...+||+.+ ...+|+.+ |.|+|.-.+++
T Consensus 91 ~~~d--~~--~~-----~~-~~~fD~V~~~~~~~~~~~-----~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 91 IHND--AA--GY-----VA-NEKCDVAACVGATWIAGG-----FAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp EESC--CT--TC-----CC-SSCEEEEEEESCGGGTSS-----SHHHHHHHTTSEEEEEEEEE
T ss_pred EECC--hH--hC-----Cc-CCCCCEEEECCChHhcCC-----HHHHHHHHHHHcCCCeEEEE
Confidence 4322 11 11 11 233334445667788753 24555554 67899876654
No 45
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=87.10 E-value=1.4 Score=42.25 Aligned_cols=112 Identities=17% Similarity=0.123 Sum_probs=58.8
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
+.|++.+.-...-+|+|+|.|.|. +...|+. |..++|||+.+.. ..+.|+... ++.|...
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s~~----------~~~~a~~~~-~~~~~~~ 83 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPSIV----------MRQQAVVHP-QVEWFTG 83 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSCHH----------HHHSSCCCT-TEEEECC
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCCHH----------HHHHHHhcc-CCEEEEC
Confidence 445555654555689999999995 4455554 3459999998642 111222222 3333322
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcE-EEEEeecCCCCC
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTL-LTVVEQDANHNG 411 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkv-vvlvEqea~hns 411 (540)
.+. .+...++..=+|-|...|||+.+ ...+|+. .+.|+ .- +++++.+.++..
T Consensus 84 --d~~-------~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~ 137 (261)
T 3ege_A 84 --YAE-------NLALPDKSVDGVISILAIHHFSH-----LEKSFQEMQRIIR-DGTIVLLTFDIRLAQ 137 (261)
T ss_dssp --CTT-------SCCSCTTCBSEEEEESCGGGCSS-----HHHHHHHHHHHBC-SSCEEEEEECGGGCC
T ss_pred --chh-------hCCCCCCCEeEEEEcchHhhccC-----HHHHHHHHHHHhC-CcEEEEEEcCCchhH
Confidence 111 12222232333445566788833 3344444 46677 63 666665544433
No 46
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=86.50 E-value=6.3 Score=36.98 Aligned_cols=112 Identities=12% Similarity=0.141 Sum_probs=63.5
Q ss_pred hhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEE
Q 009215 263 ANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFS 342 (540)
Q Consensus 263 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~ 342 (540)
.-+.|++.+.....-.|+|+|.|.| .+...|+.+ |+. ++|||+.+... .+...+.+. .-++.|.
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G----~~~~~l~~~--~~~--~v~~vD~s~~~------~~~a~~~~~--~~~~~~~ 95 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFG----WHCIYAAEH--GAK--KVLGIDLSERM------LTEAKRKTT--SPVVCYE 95 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTC----HHHHHHHHT--TCS--EEEEEESCHHH------HHHHHHHCC--CTTEEEE
T ss_pred hHHHHHHhhhccCCCEEEEECCCCC----HHHHHHHHc--CCC--EEEEEECCHHH------HHHHHHhhc--cCCeEEE
Confidence 3456667766656778999999999 355566665 222 89999986421 111111111 2334443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
... + ..+....+..=+|-|...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 96 ~~d--~-------~~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 96 QKA--I-------EDIAIEPDAYNVVLSSLALHYIAS-----FDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ECC--G-------GGCCCCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred Ecc--h-------hhCCCCCCCeEEEEEchhhhhhhh-----HHHHHHHHHHHcCCCcEEEEE
Confidence 322 1 122233344445555667888832 45666655 668998777663
No 47
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=86.32 E-value=3.8 Score=37.17 Aligned_cols=108 Identities=15% Similarity=0.147 Sum_probs=61.5
Q ss_pred hHHHHhhhcC-CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC-CceeE
Q 009215 264 NEAIRQAAQG-KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG-INLEF 341 (540)
Q Consensus 264 NqAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg-l~~eF 341 (540)
.+.|++.+.. ...-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+.|++.+ -++.|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s~~----------~~~~a~~~~~~~~~~ 94 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGSAE----------MIAEAGRHGLDNVEF 94 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESCHH----------HHHHHGGGCCTTEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCCHH----------HHHHHHhcCCCCeEE
Confidence 4456666652 333499999999985 44455554 2 38999998642 223333344 33433
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.... +. .+ ..++..=+|-|...|||+.+. .+..+|+.+ +.|+|.-.+++
T Consensus 95 ~~~d--~~-------~~-~~~~~~D~v~~~~~l~~~~~~---~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 95 RQQD--LF-------DW-TPDRQWDAVFFAHWLAHVPDD---RFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp EECC--TT-------SC-CCSSCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEE
T ss_pred Eecc--cc-------cC-CCCCceeEEEEechhhcCCHH---HHHHHHHHHHHHcCCCeEEEE
Confidence 3221 11 11 223334445566788888652 356666665 77899766644
No 48
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=85.91 E-value=6.5 Score=37.78 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=63.1
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeec
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISE 346 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~ 346 (540)
+++.+... .-+|+|+|.|.| .+...|+.+ | .++|||+.+.. ..+...+.++..|++-..+++..
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G----~~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~~~~ 124 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEG----QTAIKMAER--G---HQVILCDLSAQ------MIDRAKQAAEAKGVSDNMQFIHC 124 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTC----HHHHHHHHT--T---CEEEEEESCHH------HHHHHHHHHHC-CCGGGEEEEES
T ss_pred HHHhcCCC-CCEEEEeCCcch----HHHHHHHHC--C---CEEEEEECCHH------HHHHHHHHHHhcCCCcceEEEEc
Confidence 44444433 568999999999 456666666 2 38999998642 23344555666666433444432
Q ss_pred cCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 347 PVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 347 ~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
.+. .+. ...++..=+|-|...|||+.+ + ..+|+. .+.|+|.-.+++.
T Consensus 125 d~~--~~~----~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 125 AAQ--DVA----SHLETPVDLILFHAVLEWVAD----P-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp CGG--GTG----GGCSSCEEEEEEESCGGGCSC----H-HHHHHHHHHTEEEEEEEEEE
T ss_pred CHH--Hhh----hhcCCCceEEEECchhhcccC----H-HHHHHHHHHHcCCCeEEEEE
Confidence 111 111 022343444556677788743 3 445554 5778998777663
No 49
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=85.47 E-value=5.1 Score=39.90 Aligned_cols=111 Identities=6% Similarity=0.099 Sum_probs=59.2
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-----eeEEEeeccCCC
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-----LEFSMISEPVTP 350 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-----~eF~~v~~~~~~ 350 (540)
.-+|+|+|.|.|.- +..++.+.+ -++|||+.+... ++...+++...++. +.++++...+..
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~~----~~v~GiD~S~~~------l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~ 114 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGEI----ALLVATDPDADA------IARGNERYNKLNSGIKTKYYKFDYIQETIRS 114 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTTC----SEEEEEESCHHH------HHHHHHHHHHHCC----CCCEEEEEECCTTS
T ss_pred CCeEEEEecCCcHh----HHHHHhcCC----CeEEEEECCHHH------HHHHHHHHHhccccccccccccchhhhhccc
Confidence 45899999999842 222333221 379999987532 22222334444432 123333322211
Q ss_pred CCCccccc--CccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 351 SLLTRENL--DLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 351 ~~l~~~~L--~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.... ..+ ....+..=+|.|.+.||++.+. . .+..+|+.+ |.|+|.-++++
T Consensus 115 d~~~-~~l~~~~~~~~FD~V~~~~~lhy~~~~-~-~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 115 DTFV-SSVREVFYFGKFNIIDWQFAIHYSFHP-R-HYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp SSHH-HHHHTTCCSSCEEEEEEESCGGGTCST-T-THHHHHHHHHHHEEEEEEEEE
T ss_pred chhh-hhhhccccCCCeeEEEECchHHHhCCH-H-HHHHHHHHHHHHcCCCCEEEE
Confidence 1100 111 1123445567788999987653 2 346777766 77999887765
No 50
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=85.19 E-value=3.9 Score=41.48 Aligned_cols=107 Identities=16% Similarity=0.149 Sum_probs=58.9
Q ss_pred HHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEE
Q 009215 265 EAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSM 343 (540)
Q Consensus 265 qAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~ 343 (540)
..|++.+. -...-+|+|+|.|.|. +...|+.+- |.+++|+++.+ . ..+.|++.. +++|
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-~----------~~~~a~~~~-~v~~-- 256 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDLP-Q----------VIENAPPLS-GIEH-- 256 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-H----------HHTTCCCCT-TEEE--
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeChH-H----------HHHhhhhcC-CCEE--
Confidence 56777764 2345789999999994 455555542 56789988862 1 111122211 2333
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE-Eee
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTV-VEQ 405 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvl-vEq 405 (540)
+..... + . + ++ +=+|-+...|||+.+. ....+|+.+ +.|+|.-.++ +|.
T Consensus 257 ~~~d~~----~--~--~-~~-~D~v~~~~~lh~~~d~---~~~~~l~~~~~~L~pgG~l~i~e~ 307 (372)
T 1fp1_D 257 VGGDMF----A--S--V-PQ-GDAMILKAVCHNWSDE---KCIEFLSNCHKALSPNGKVIIVEF 307 (372)
T ss_dssp EECCTT----T--C--C-CC-EEEEEEESSGGGSCHH---HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCcc----c--C--C-CC-CCEEEEecccccCCHH---HHHHHHHHHHHhcCCCCEEEEEEe
Confidence 321111 1 1 1 11 3344566778888653 344666665 6789976554 453
No 51
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=85.17 E-value=4.2 Score=37.55 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=57.6
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLT 354 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~ 354 (540)
..-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.+...++++.|.... +
T Consensus 37 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~s~~------~~~~a~~~~~~~~~~~~~~~~d--~------ 93 (246)
T 1y8c_A 37 VFDDYLDLACGTGN----LTENLCPK--F---KNTWAVDLSQE------MLSEAENKFRSQGLKPRLACQD--I------ 93 (246)
T ss_dssp CTTEEEEETCTTST----THHHHGGG--S---SEEEEECSCHH------HHHHHHHHHHHTTCCCEEECCC--G------
T ss_pred CCCeEEEeCCCCCH----HHHHHHHC--C---CcEEEEECCHH------HHHHHHHHHhhcCCCeEEEecc--c------
Confidence 45689999999986 33455554 2 37999997642 1223334444555544443221 1
Q ss_pred ccccCccCCceEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 355 RENLDLREGEALFVNSIM-HLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 355 ~~~L~i~~~EaLaVN~~~-~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
..+... +..=+|-+.. .|||+.+. .....+|+.+ +.|+|.-.++++
T Consensus 94 -~~~~~~-~~fD~v~~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 94 -SNLNIN-RKFDLITCCLDSTNYIIDS--DDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -GGCCCS-CCEEEEEECTTGGGGCCSH--HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -ccCCcc-CCceEEEEcCccccccCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 111121 3222334555 78888542 3455666665 567998777764
No 52
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=84.82 E-value=8.8 Score=34.94 Aligned_cols=111 Identities=10% Similarity=0.099 Sum_probs=63.1
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.|...+.....-+|+|+|.|.| .+...|+.+ + -++|||+.+... .+...+.+...+ ++.| +.
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G----~~~~~l~~~--~---~~v~~vD~s~~~------~~~a~~~~~~~~-~~~~--~~ 103 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAG----AFTEKLAPH--C---KRLTVIDVMPRA------IGRACQRTKRWS-HISW--AA 103 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTS----HHHHHHGGG--E---EEEEEEESCHHH------HHHHHHHTTTCS-SEEE--EE
T ss_pred HHHHHcccCCCCcEEEEcCCCC----HHHHHHHHc--C---CEEEEEECCHHH------HHHHHHhcccCC-CeEE--EE
Confidence 3444555666789999999999 455666665 2 489999986421 222223333322 3333 33
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
..+. .+. .++..=+|-|...|||+.+. ..+..+|+.+ +.|+|.-++++.
T Consensus 104 ~d~~--~~~------~~~~fD~v~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 153 (216)
T 3ofk_A 104 TDIL--QFS------TAELFDLIVVAEVLYYLEDM--TQMRTAIDNMVKMLAPGGHLVFG 153 (216)
T ss_dssp CCTT--TCC------CSCCEEEEEEESCGGGSSSH--HHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cchh--hCC------CCCCccEEEEccHHHhCCCH--HHHHHHHHHHHHHcCCCCEEEEE
Confidence 2111 111 12333345556778888753 3455666654 778998777663
No 53
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=84.64 E-value=7 Score=35.71 Aligned_cols=101 Identities=13% Similarity=0.144 Sum_probs=54.8
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.| .+...|+.+ ++ ++|||+.+... .+...+.++..+.+++|.... +. .+.
T Consensus 39 ~~~vLDlG~G~G----~~~~~l~~~--~~---~v~~vD~s~~~------~~~a~~~~~~~~~~~~~~~~d--~~--~~~- 98 (227)
T 1ve3_A 39 RGKVLDLACGVG----GFSFLLEDY--GF---EVVGVDISEDM------IRKAREYAKSRESNVEFIVGD--AR--KLS- 98 (227)
T ss_dssp CCEEEEETCTTS----HHHHHHHHT--TC---EEEEEESCHHH------HHHHHHHHHHTTCCCEEEECC--TT--SCC-
T ss_pred CCeEEEEeccCC----HHHHHHHHc--CC---EEEEEECCHHH------HHHHHHHHHhcCCCceEEECc--hh--cCC-
Confidence 458999999998 344556655 33 99999986421 222333444444444443322 11 111
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
+.-..-+.|+.|..+.+++.. ....+|+. .+.|+|.-.+++
T Consensus 99 --~~~~~~D~v~~~~~~~~~~~~-----~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 99 --FEDKTFDYVIFIDSIVHFEPL-----ELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp --SCTTCEEEEEEESCGGGCCHH-----HHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCCcEEEEEEcCchHhCCHH-----HHHHHHHHHHHHcCCCcEEEE
Confidence 111123566666665555542 23455555 477899876654
No 54
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=84.46 E-value=7.7 Score=37.94 Aligned_cols=112 Identities=12% Similarity=0.120 Sum_probs=61.2
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
+.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+.+.. ..+...+.++..|+.-...++
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~~ 145 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLSKN------QHARCEQVLASIDTNRSRQVL 145 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESCHH------HHHHHHHHHHTSCCSSCEEEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECCHH------HHHHHHHHHHhcCCCCceEEE
Confidence 345565554455689999999884 4444554432 28999998642 123344455566654223333
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
...+ ..+ . ..=++|+ +...|||+..+ ....+|+.+ +.|+|.-.+++
T Consensus 146 ~~d~--~~~-----~-~~fD~v~--~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 146 LQGW--EDF-----A-EPVDRIV--SIEAFEHFGHE---NYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp ESCG--GGC-----C-CCCSEEE--EESCGGGTCGG---GHHHHHHHHHHHSCTTCEEEE
T ss_pred ECCh--HHC-----C-CCcCEEE--EeChHHhcCHH---HHHHHHHHHHHhcCCCcEEEE
Confidence 3211 111 1 1123433 44567888542 345566554 77899866654
No 55
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=84.43 E-value=10 Score=35.23 Aligned_cols=101 Identities=14% Similarity=0.034 Sum_probs=56.3
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-.|+|+|.|.| .+...|+. +..++|||+.+.. ..+...+.+...+..-..+++...+. .+..
T Consensus 68 ~~vLDiGcG~G----~~~~~l~~-----~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~- 129 (235)
T 3lcc_A 68 GRALVPGCGGG----HDVVAMAS-----PERFVVGLDISES------ALAKANETYGSSPKAEYFSFVKEDVF--TWRP- 129 (235)
T ss_dssp EEEEEETCTTC----HHHHHHCB-----TTEEEEEECSCHH------HHHHHHHHHTTSGGGGGEEEECCCTT--TCCC-
T ss_pred CCEEEeCCCCC----HHHHHHHh-----CCCeEEEEECCHH------HHHHHHHHhhccCCCcceEEEECchh--cCCC-
Confidence 49999999998 34445654 3468999998642 22333444444332222333332111 1111
Q ss_pred ccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 357 NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
.+..=+|-+...||++..+ .+..+|+.+ +.|+|.-.+++
T Consensus 130 -----~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 130 -----TELFDLIFDYVFFCAIEPE---MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp -----SSCEEEEEEESSTTTSCGG---GHHHHHHHHHHHEEEEEEEEE
T ss_pred -----CCCeeEEEEChhhhcCCHH---HHHHHHHHHHHHCCCCcEEEE
Confidence 1122234456677888533 466777766 55899877765
No 56
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=84.32 E-value=8.2 Score=36.99 Aligned_cols=106 Identities=18% Similarity=0.131 Sum_probs=57.1
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
+.+++.+.-...-.|+|+|.|.|. +...|+. + ..++|||+.+... . +.|+...-++.|...
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~-~----~~~v~gvD~s~~~------~----~~a~~~~~~~~~~~~ 107 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQ----LTEKIAQ-S----GAEVLGTDNAATM------I----EKARQNYPHLHFDVA 107 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSH----HHHHHHH-T----TCEEEEEESCHHH------H----HHHHHHCTTSCEEEC
T ss_pred HHHHHHhCCCCCCEEEEecCCCCH----HHHHHHh-C----CCeEEEEECCHHH------H----HHHHhhCCCCEEEEC
Confidence 345566654455689999999984 3444444 2 3489999986421 1 112211123333322
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
. + .. +.. ++..=+|-+...|||+.+ + ..+|+. .|.|+|.-.+++.
T Consensus 108 d--~--~~-----~~~-~~~fD~v~~~~~l~~~~d----~-~~~l~~~~~~LkpgG~l~~~ 153 (279)
T 3ccf_A 108 D--A--RN-----FRV-DKPLDAVFSNAMLHWVKE----P-EAAIASIHQALKSGGRFVAE 153 (279)
T ss_dssp C--T--TT-----CCC-SSCEEEEEEESCGGGCSC----H-HHHHHHHHHHEEEEEEEEEE
T ss_pred C--h--hh-----CCc-CCCcCEEEEcchhhhCcC----H-HHHHHHHHHhcCCCcEEEEE
Confidence 1 1 11 222 233334445667788753 2 355554 5778998776654
No 57
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=83.45 E-value=13 Score=34.54 Aligned_cols=102 Identities=9% Similarity=0.060 Sum_probs=55.8
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC-CceeEEEeeccCCCCCCc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG-INLEFSMISEPVTPSLLT 354 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg-l~~eF~~v~~~~~~~~l~ 354 (540)
.-.|+|+|.|.|. +...|+.+- ..++|||+.+... .+...+.+...+ .++.| +...+
T Consensus 80 ~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s~~~------~~~a~~~~~~~~~~~~~~--~~~d~------ 137 (241)
T 2ex4_A 80 TSCALDCGAGIGR----ITKRLLLPL----FREVDMVDITEDF------LVQAKTYLGEEGKRVRNY--FCCGL------ 137 (241)
T ss_dssp CSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESCHHH------HHHHHHHTGGGGGGEEEE--EECCG------
T ss_pred CCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCCHHH------HHHHHHHhhhcCCceEEE--EEcCh------
Confidence 5689999999983 555666553 2389999976421 222333333332 22333 32211
Q ss_pred ccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 355 RENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 355 ~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
..+....+..=+|-+...|||+.+. .+..+|+.+ +.|+|.-.+++
T Consensus 138 -~~~~~~~~~fD~v~~~~~l~~~~~~---~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 138 -QDFTPEPDSYDVIWIQWVIGHLTDQ---HLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp -GGCCCCSSCEEEEEEESCGGGSCHH---HHHHHHHHHHHHEEEEEEEEE
T ss_pred -hhcCCCCCCEEEEEEcchhhhCCHH---HHHHHHHHHHHhcCCCeEEEE
Confidence 1122223323334455678888653 345666655 67899876655
No 58
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=83.27 E-value=5 Score=39.04 Aligned_cols=111 Identities=9% Similarity=0.093 Sum_probs=61.5
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC----cee
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI----NLE 340 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl----~~e 340 (540)
..+++.+..... .|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.+...++ +++
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~~v~ 136 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G---WEVTALELSTS------VLAAFRKRLAEAPADVRDRCT 136 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T---CCEEEEESCHH------HHHHHHHHHHTSCHHHHTTEE
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C---CeEEEEECCHH------HHHHHHHHHhhcccccccceE
Confidence 445555544334 89999999996 45556655 2 47999998642 23334445555552 344
Q ss_pred EEEeeccCCCCCCcccccCccCCce-EEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 341 FSMISEPVTPSLLTRENLDLREGEA-LFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 341 F~~v~~~~~~~~l~~~~L~i~~~Ea-LaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
|.... +. .+.. ++.. +||.+...+|++.. ..+..+|+.+ +.|+|.-.+++.
T Consensus 137 ~~~~d--~~-------~~~~-~~~fD~v~~~~~~~~~~~~---~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 137 LVQGD--MS-------AFAL-DKRFGTVVISSGSINELDE---ADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp EEECB--TT-------BCCC-SCCEEEEEECHHHHTTSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeCc--hh-------cCCc-CCCcCEEEECCcccccCCH---HHHHHHHHHHHHHcCCCcEEEEE
Confidence 43322 11 1122 2222 33433444565532 2466777766 678998777664
No 59
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=83.09 E-value=10 Score=38.76 Aligned_cols=150 Identities=11% Similarity=0.105 Sum_probs=78.8
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
++|++...-.+.-.|+|+|.|.| .+...|+.+ |. -++|||+.+ .. .+...+.++..++.=...++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~~------~~~a~~~~~~~~~~~~v~~~ 117 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-KM------ADHARALVKANNLDHIVEVI 117 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-TT------HHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-HH------HHHHHHHHHHcCCCCeEEEE
Confidence 34444444444568999999999 344555655 22 289999987 43 22334455566655223444
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEeecCCCC----CCchhH---
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVEQDANHN----GPFFLG--- 416 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvEqea~hn----sp~F~~--- 416 (540)
...+. .+. +. ..=++|+.+. -.|.+..+ ..++.+|+.+ +-|+|.-+++...-.-+. .+.+..
T Consensus 118 ~~d~~--~~~---~~-~~~D~Iv~~~--~~~~l~~e--~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3r0q_C 118 EGSVE--DIS---LP-EKVDVIISEW--MGYFLLRE--SMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRN 187 (376)
T ss_dssp ESCGG--GCC---CS-SCEEEEEECC--CBTTBTTT--CTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHH
T ss_pred ECchh--hcC---cC-CcceEEEEcC--hhhcccch--HHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhh
Confidence 32211 111 11 1223444433 23444433 4578888887 889999888664322111 122221
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCC
Q 009215 417 RFLESLHYYSAIFDSLEASLPRN 439 (540)
Q Consensus 417 RF~EAL~yYsAlFDSLea~lp~~ 439 (540)
.|.+.+..+..+++..+...+.+
T Consensus 188 ~~~~~~~~W~~fw~~~~~~~G~d 210 (376)
T 3r0q_C 188 DFDGAMADWHNFSDEIKSYYGVD 210 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCC
T ss_pred hhhhhhhhhhhhhhccCccccCC
Confidence 34455555556665555444433
No 60
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=82.97 E-value=11 Score=35.16 Aligned_cols=111 Identities=15% Similarity=0.239 Sum_probs=58.6
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeec
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISE 346 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~ 346 (540)
+++.......-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.++..++++.|....
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~--~---~~v~gvD~s~~------~l~~a~~~~~~~~~~v~~~~~d- 96 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGI----PTLELAER--G---YEVVGLDLHEE------MLRVARRKAKERNLKIEFLQGD- 96 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHHHHTTCCCEEEESC-
T ss_pred HHHHhcccCCCEEEEeCCCCCH----HHHHHHHC--C---CeEEEEECCHH------HHHHHHHHHHhcCCceEEEECC-
Confidence 3444333445689999999994 44556655 2 38999998642 2233344455556555443322
Q ss_pred cCCCCCCcccccCccCCceEEEEeccc-cccccccccchHHHHHHHH-HhcCCcEEEEEee
Q 009215 347 PVTPSLLTRENLDLREGEALFVNSIMH-LHKYVKESRGSLKAILQAI-KRLNPTLLTVVEQ 405 (540)
Q Consensus 347 ~~~~~~l~~~~L~i~~~EaLaVN~~~~-LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvEq 405 (540)
+. . +... +..=+|-|.+. +|++. ......+|+.+ +.|+|.-+++++-
T Consensus 97 -~~--~-----~~~~-~~fD~v~~~~~~~~~~~---~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 97 -VL--E-----IAFK-NEFDAVTMFFSTIMYFD---EEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp -GG--G-----CCCC-SCEEEEEECSSGGGGSC---HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -hh--h-----cccC-CCccEEEEcCCchhcCC---HHHHHHHHHHHHHHcCCCeEEEEec
Confidence 11 1 1111 22212223322 33332 23456666665 7789998887753
No 61
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=82.95 E-value=1.6 Score=41.88 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=63.8
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
=+|+|+|.|.| +|--.++.+ .|..+++|++-+.. .++-..++|+..|+...+++... ..
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~~~------~leiar~~~~~~g~~~~v~~~d~-------~~- 109 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNE---NEKIIYHAYDIDRA------EIAFLSSIIGKLKTTIKYRFLNK-------ES- 109 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCS---SCCCEEEEECSCHH------HHHHHHHHHHHSCCSSEEEEECC-------HH-
T ss_pred CeEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCCHH------HHHHHHHHHHhcCCCccEEEecc-------cc-
Confidence 37899998877 454455544 25559999998642 34556677888887755555321 00
Q ss_pred ccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEee
Q 009215 357 NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVEQ 405 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvEq 405 (540)
..-++..=+|-..-.||+| ++ .....++.++.|+|..+++.=+
T Consensus 110 --~~~~~~~DvVLa~k~LHlL-~~---~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 110 --DVYKGTYDVVFLLKMLPVL-KQ---QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp --HHTTSEEEEEEEETCHHHH-HH---TTCCHHHHHHTCEEEEEEEEEE
T ss_pred --cCCCCCcChhhHhhHHHhh-hh---hHHHHHHHHHHhCCCCEEEEeC
Confidence 1123333344445556888 54 2344558889999999998754
No 62
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=82.76 E-value=12 Score=34.43 Aligned_cols=107 Identities=20% Similarity=0.252 Sum_probs=57.7
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC--CceeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG--INLEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg--l~~eF~ 342 (540)
..|.+.+.....-.|+|+|.|.|. +...|+.+ |+. ++|||+.+.. ..+.|++.. -++.|
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~~--~v~~vD~s~~----------~~~~a~~~~~~~~~~~- 93 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GAS--YVLGLDLSEK----------MLARARAAGPDTGITY- 93 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESCHH----------HHHHHHHTSCSSSEEE-
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CCC--eEEEEcCCHH----------HHHHHHHhcccCCceE-
Confidence 456666665556689999999984 44556655 221 8999997642 112222222 12333
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
+...+ ..+.+..+..=+|-+...|||+.+ ...+|+. .+.|+|.-.+++
T Consensus 94 -~~~d~-------~~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 94 -ERADL-------DKLHLPQDSFDLAYSSLALHYVED-----VARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp -EECCG-------GGCCCCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred -EEcCh-------hhccCCCCCceEEEEeccccccch-----HHHHHHHHHHhcCcCcEEEE
Confidence 32111 112222332323344557788742 3455555 477899876655
No 63
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=82.21 E-value=19 Score=33.16 Aligned_cols=108 Identities=13% Similarity=0.159 Sum_probs=59.1
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeec
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISE 346 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~ 346 (540)
|++.+... -.|+|+|.|.|. +...|+.+ .++|||+.+... .+...+.+...+.+++|....
T Consensus 27 ~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s~~~------~~~a~~~~~~~~~~~~~~~~d- 87 (243)
T 3d2l_A 27 VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLSEEM------LEIAQEKAMETNRHVDFWVQD- 87 (243)
T ss_dssp HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESCHHH------HHHHHHHHHHTTCCCEEEECC-
T ss_pred HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECCHHH------HHHHHHhhhhcCCceEEEEcC-
Confidence 44444432 479999999984 55566655 489999986421 222333444445444443322
Q ss_pred cCCCCCCcccccCccCCceEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 347 PVTPSLLTRENLDLREGEALFVNSIM-HLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 347 ~~~~~~l~~~~L~i~~~EaLaVN~~~-~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
+. .+... +..=+|-|.. .+||+.+. .....+|+.+ +.|+|.-.++++
T Consensus 88 -~~-------~~~~~-~~fD~v~~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 88 -MR-------ELELP-EPVDAITILCDSLNYLQTE--ADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp -GG-------GCCCS-SCEEEEEECTTGGGGCCSH--HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hh-------hcCCC-CCcCEEEEeCCchhhcCCH--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 11 11111 2222233333 67887543 3455666665 678999887764
No 64
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=81.86 E-value=21 Score=31.24 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=26.8
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.+++.+-. ..-+|+|+|.|.|. +...|+.+ | .++|||+.+.
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~~~ 78 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ--G---HDVLGTDLDP 78 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT--T---CEEEEEESCH
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC--C---CcEEEEcCCH
Confidence 44455432 34589999999884 44555555 2 2899999764
No 65
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=81.69 E-value=19 Score=35.13 Aligned_cols=133 Identities=13% Similarity=0.113 Sum_probs=67.4
Q ss_pred HHHHhcCCcchhhhHhhhHHHHhh----hcCC-CeeEEEEccCCC---CCchHHHHHHHhcCCCCCCeEEEeEecCCCCh
Q 009215 247 QLVYQTTPYISFGFMAANEAIRQA----AQGK-DSLHIIDLGMER---TLQWPSLIRSLASRPEGPPRIRITCLISNQNL 318 (540)
Q Consensus 247 ~~f~e~sP~~kfahftANqAILEA----~~g~-~~VHIIDfgI~~---G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~ 318 (540)
+.+.++.|-+. ....+|+..++. +... ..-+|+|+|.|. |. ...+++.. . |..|||+|+.+...
T Consensus 45 ~~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~--~----p~~~v~~vD~sp~~ 116 (274)
T 2qe6_A 45 DYACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSV--N----PDARVVYVDIDPMV 116 (274)
T ss_dssp HHHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHH--C----TTCEEEEEESSHHH
T ss_pred HHHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHh--C----CCCEEEEEECChHH
Confidence 34455556543 123345544443 3322 224899999999 83 33333322 1 44699999986321
Q ss_pred hHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc--------cccCccCCceEEEEeccccccccccccchHHHHHH
Q 009215 319 SELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR--------ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQ 390 (540)
Q Consensus 319 ~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~--------~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~ 390 (540)
++. ..+++.. .-++ +++...+. .... +.+ ..+...+|-+...|||+.++ ....+|+
T Consensus 117 --l~~----Ar~~~~~-~~~v--~~~~~D~~--~~~~~~~~~~~~~~~--d~~~~d~v~~~~vlh~~~d~---~~~~~l~ 180 (274)
T 2qe6_A 117 --LTH----GRALLAK-DPNT--AVFTADVR--DPEYILNHPDVRRMI--DFSRPAAIMLVGMLHYLSPD---VVDRVVG 180 (274)
T ss_dssp --HHH----HHHHHTT-CTTE--EEEECCTT--CHHHHHHSHHHHHHC--CTTSCCEEEETTTGGGSCTT---THHHHHH
T ss_pred --HHH----HHHhcCC-CCCe--EEEEeeCC--CchhhhccchhhccC--CCCCCEEEEEechhhhCCcH---HHHHHHH
Confidence 111 1112221 1123 33332221 1000 112 22356677788899999764 4567777
Q ss_pred HHHh-cCCcEEEEE
Q 009215 391 AIKR-LNPTLLTVV 403 (540)
Q Consensus 391 ~Ir~-L~Pkvvvlv 403 (540)
.+++ |+|.-.+++
T Consensus 181 ~~~~~L~pGG~l~i 194 (274)
T 2qe6_A 181 AYRDALAPGSYLFM 194 (274)
T ss_dssp HHHHHSCTTCEEEE
T ss_pred HHHHhCCCCcEEEE
Confidence 7655 999755544
No 66
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=81.53 E-value=14 Score=37.77 Aligned_cols=112 Identities=15% Similarity=0.039 Sum_probs=55.1
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhc-C----CceeEEEeeccCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSL-G----INLEFSMISEPVT 349 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~f-g----l~~eF~~v~~~~~ 349 (540)
..-+|+|+|.|.|.-- ..|+.+- .|..++|||+.+... ++...+++.+....+ | -++.|.... +.
T Consensus 83 ~~~~VLDlGcG~G~~~----~~la~~~--~~~~~v~gvD~s~~~--l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d--~~ 152 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDV----YLASKLV--GEHGKVIGVDMLDNQ--LEVARKYVEYHAEKFFGSPSRSNVRFLKGF--IE 152 (383)
T ss_dssp TTCEEEEESCTTSHHH----HHHHHHH--TTTCEEEEEECCHHH--HHHHHHTHHHHHHHHHSSTTCCCEEEEESC--TT
T ss_pred CCCEEEEecCccCHHH----HHHHHHh--CCCCEEEEEECCHHH--HHHHHHHHHHhhhhcccccCCCceEEEEcc--HH
Confidence 3458999999999433 3333321 134599999986432 222222222222222 3 244443322 11
Q ss_pred CCCCcc-cccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 350 PSLLTR-ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 350 ~~~l~~-~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
.+.. ....+.++..=+|-+...|||+.+ ...+|+. .|.|+|.-.+++
T Consensus 153 --~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-----~~~~l~~~~r~LkpgG~l~i 201 (383)
T 4fsd_A 153 --NLATAEPEGVPDSSVDIVISNCVCNLSTN-----KLALFKEIHRVLRDGGELYF 201 (383)
T ss_dssp --CGGGCBSCCCCTTCEEEEEEESCGGGCSC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred --HhhhcccCCCCCCCEEEEEEccchhcCCC-----HHHHHHHHHHHcCCCCEEEE
Confidence 1100 000233343334445566777643 3455555 478899876655
No 67
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=80.93 E-value=7.6 Score=35.99 Aligned_cols=113 Identities=12% Similarity=0.127 Sum_probs=56.8
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeEEEeeccCCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEFSMISEPVTPSL 352 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF~~v~~~~~~~~ 352 (540)
+.-+|+|+|.+.|.- -..||.+- +|.-+||+|+.+.. ..+...+.++..|+. ++|..-...-....
T Consensus 58 ~~~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~ 125 (221)
T 3u81_A 58 SPSLVLELGAYCGYS----AVRMARLL--QPGARLLTMEINPD------CAAITQQMLNFAGLQDKVTILNGASQDLIPQ 125 (221)
T ss_dssp CCSEEEEECCTTSHH----HHHHHTTS--CTTCEEEEEESCHH------HHHHHHHHHHHHTCGGGEEEEESCHHHHGGG
T ss_pred CCCEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeCChH------HHHHHHHHHHHcCCCCceEEEECCHHHHHHH
Confidence 335899999999842 33344421 23469999998642 223344455566654 44433221000000
Q ss_pred CcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEeecC
Q 009215 353 LTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVEQDA 407 (540)
Q Consensus 353 l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvEqea 407 (540)
+. ......+=+.|+++... |+.. +...++..++.|+|.-+++++.-.
T Consensus 126 ~~-~~~~~~~fD~V~~d~~~--~~~~-----~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 126 LK-KKYDVDTLDMVFLDHWK--DRYL-----PDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp TT-TTSCCCCCSEEEECSCG--GGHH-----HHHHHHHHTTCCCTTCEEEESCCC
T ss_pred HH-HhcCCCceEEEEEcCCc--ccch-----HHHHHHHhccccCCCeEEEEeCCC
Confidence 00 00001223466555432 2221 223455555899999999885433
No 68
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=80.59 E-value=9.6 Score=36.97 Aligned_cols=107 Identities=10% Similarity=0.054 Sum_probs=58.9
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhc---CCceeEEEeeccCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSL---GINLEFSMISEPVTPS 351 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~f---gl~~eF~~v~~~~~~~ 351 (540)
..-+|+|+|.|.|. +...|+.+- +|..++|||+.+.. ..+...+.++.. .-++.|.... +.
T Consensus 36 ~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~~v~~~~~d--~~-- 99 (299)
T 3g5t_A 36 ERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLSAT------MIKTAEVIKEGSPDTYKNVSFKISS--SD-- 99 (299)
T ss_dssp CCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESCHH------HHHHHHHHHHHCC-CCTTEEEEECC--TT--
T ss_pred CCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCCHH------HHHHHHHHHHhccCCCCceEEEEcC--HH--
Confidence 56789999999983 444555321 14568999998642 122333344444 2344444322 21
Q ss_pred CCcccc-cCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 352 LLTREN-LDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 352 ~l~~~~-L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
.+.... ..+..+..=+|-|...+||+ + ...+|+. .+.|+|.-.+++
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-----~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-D-----FEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-C-----HHHHHHHHHHHEEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-C-----HHHHHHHHHHhcCCCcEEEE
Confidence 111111 01112455566677788998 3 3455554 477899877755
No 69
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=80.58 E-value=13 Score=33.39 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=54.8
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-+|+|+|.|.|.-...++ +. ++ .++|||+.+... .+...+.++..+.++.|.... +.
T Consensus 25 ~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s~~~------~~~a~~~~~~~~~~~~~~~~d--~~------- 81 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEISDLQ------LKKAENFSRENNFKLNISKGD--IR------- 81 (209)
T ss_dssp SEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECCHHH------HHHHHHHHHHHTCCCCEEECC--TT-------
T ss_pred CEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECCHHH------HHHHHHHHHhcCCceEEEECc--hh-------
Confidence 479999999886544443 22 22 389999986432 222333444444444443221 11
Q ss_pred ccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 357 NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
.+...++..=+|-+...+||+.. .....+|+. .+.|+|.-.+++.
T Consensus 82 ~~~~~~~~fD~v~~~~~l~~~~~---~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 82 KLPFKDESMSFVYSYGTIFHMRK---NDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp SCCSCTTCEEEEEECSCGGGSCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hCCCCCCceeEEEEcChHHhCCH---HHHHHHHHHHHHHcCCCcEEEEE
Confidence 12222333333445567788742 235556655 4778998776553
No 70
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=79.28 E-value=5.3 Score=40.21 Aligned_cols=133 Identities=11% Similarity=0.008 Sum_probs=77.5
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.|++.+.. --.|+|+|.|.|. |--.++. .+|..++++++-+.. .++-+.+++..+|+++.|....
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~---~~p~a~y~a~DId~~------~le~a~~~l~~~g~~~~~~v~D 189 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMG---LPAETVYIASDIDAR------LVGFVDEALTRLNVPHRTNVAD 189 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTT---CCTTCEEEEEESBHH------HHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHh---hCCCCEEEEEeCCHH------HHHHHHHHHHhcCCCceEEEee
Confidence 45555533 3478999998872 2111221 247889999998643 3555777888888887665544
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEeec--CCCCCCchhHHHHHHHH
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVEQD--ANHNGPFFLGRFLESLH 423 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvEqe--a~hnsp~F~~RF~EAL~ 423 (540)
....+ .-.+.+++. +...+|+|-++ .+...++.+..|+|..+++.=+- .+--++-+ -.
T Consensus 190 ~~~~~--------p~~~~DvaL--~lkti~~Le~q---~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm-------~~ 249 (281)
T 3lcv_B 190 LLEDR--------LDEPADVTL--LLKTLPCLETQ---QRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGM-------FQ 249 (281)
T ss_dssp TTTSC--------CCSCCSEEE--ETTCHHHHHHH---STTHHHHHHHHSSCSEEEEEEECC-------CH-------HH
T ss_pred ecccC--------CCCCcchHH--HHHHHHHhhhh---hhHHHHHHHHHhCCCCEEEeccchhhcCCCcch-------hh
Confidence 21110 111234443 44566888654 23455599999999999987443 22222333 25
Q ss_pred HHHHHHHhhh
Q 009215 424 YYSAIFDSLE 433 (540)
Q Consensus 424 yYsAlFDSLe 433 (540)
.|+..|+..-
T Consensus 250 ~Y~~~~e~~~ 259 (281)
T 3lcv_B 250 NYSQSFESQA 259 (281)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777777743
No 71
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=78.91 E-value=7.6 Score=34.92 Aligned_cols=110 Identities=17% Similarity=0.161 Sum_probs=60.2
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEEEeeccCCCCCCc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFSMISEPVTPSLLT 354 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~~v~~~~~~~~l~ 354 (540)
.-.|+|+|.|.|. +...++.++ .-++|||+.+.. ..+...+.++..++ +++|.... +. .+.
T Consensus 45 ~~~vLDlgcG~G~----~~~~~~~~~----~~~v~~vD~~~~------~~~~a~~~~~~~~~~~v~~~~~d--~~--~~~ 106 (189)
T 3p9n_A 45 GLAVLDLYAGSGA----LGLEALSRG----AASVLFVESDQR------SAAVIARNIEALGLSGATLRRGA--VA--AVV 106 (189)
T ss_dssp TCEEEEETCTTCH----HHHHHHHTT----CSEEEEEECCHH------HHHHHHHHHHHHTCSCEEEEESC--HH--HHH
T ss_pred CCEEEEeCCCcCH----HHHHHHHCC----CCeEEEEECCHH------HHHHHHHHHHHcCCCceEEEEcc--HH--HHH
Confidence 3479999999993 222234342 348999998642 22333444555565 34443221 10 000
Q ss_pred ccccCccCCceEEEEeccccccccccccchHHHHHHHHHh---cCCcEEEEEeecCCCC
Q 009215 355 RENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKR---LNPTLLTVVEQDANHN 410 (540)
Q Consensus 355 ~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~---L~PkvvvlvEqea~hn 410 (540)
..+.-..=+.|+.|..+ |+.. ...+.+|..+++ |+|.-+++++.+....
T Consensus 107 -~~~~~~~fD~i~~~~p~--~~~~----~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 107 -AAGTTSPVDLVLADPPY--NVDS----ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp -HHCCSSCCSEEEECCCT--TSCH----HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred -hhccCCCccEEEECCCC--Ccch----hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 00111223577777664 3321 246677777765 9999999888766543
No 72
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=78.87 E-value=10 Score=38.30 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=59.0
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|. +...|+.+ +.-+++||+.+ +. .+...+.++..+++=...++...+. .+.
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-~~------l~~a~~~~~~~~~~~~v~~~~~d~~--~~~- 128 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-SI------SDYAVKIVKANKLDHVVTIIKGKVE--EVE- 128 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-TH------HHHHHHHHHHTTCTTTEEEEESCTT--TCC-
T ss_pred CCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-HH------HHHHHHHHHHcCCCCcEEEEECcHH--Hcc-
Confidence 3479999999993 55566665 24599999987 32 2234445556665522344432221 111
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
+....=++|+.+.+ .+.+..+ ...+.+|+.+ |-|+|.-+++.+
T Consensus 129 --~~~~~fD~Iis~~~--~~~l~~~--~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 129 --LPVEKVDIIISEWM--GYCLFYE--SMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp --CSSSCEEEEEECCC--BBTBTBT--CCHHHHHHHHHHHEEEEEEEESC
T ss_pred --CCCCceEEEEEccc--cccccCc--hhHHHHHHHHHHhCCCCCEEccc
Confidence 11111234444433 2333332 4577888887 789999888743
No 73
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=78.05 E-value=12 Score=34.23 Aligned_cols=105 Identities=14% Similarity=0.085 Sum_probs=56.1
Q ss_pred HHHHhhhcC-CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEE
Q 009215 265 EAIRQAAQG-KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFS 342 (540)
Q Consensus 265 qAILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~ 342 (540)
+.+++.+.. ...-+|+|+|.|.|. +...|+.+ ++ ++|||+.+... .+.|++..- ++.|
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~----------~~~a~~~~~~~v~~- 90 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN---DITCVEASEEA----------ISHAQGRLKDGITY- 90 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS---CEEEEESCHHH----------HHHHHHHSCSCEEE-
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCCHHH----------HHHHHHhhhCCeEE-
Confidence 334444431 223469999999983 55666654 33 69999986421 112222111 3333
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHH--hcCCcEEEEE
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIK--RLNPTLLTVV 403 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir--~L~Pkvvvlv 403 (540)
+...+ ..+ ..++..=+|-|...|||+.+ + +.+|+.++ -|+|.-.+++
T Consensus 91 -~~~d~-------~~~-~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 91 -IHSRF-------EDA-QLPRRYDNIVLTHVLEHIDD----P-VALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp -EESCG-------GGC-CCSSCEEEEEEESCGGGCSS----H-HHHHHHHHHTTEEEEEEEEE
T ss_pred -EEccH-------HHc-CcCCcccEEEEhhHHHhhcC----H-HHHHHHHHHHhcCCCCEEEE
Confidence 33211 111 12333334556667888853 2 56777665 7899766554
No 74
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=77.96 E-value=22 Score=31.09 Aligned_cols=115 Identities=13% Similarity=0.067 Sum_probs=61.6
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCce-eEE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINL-EFS 342 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~-eF~ 342 (540)
.+.+++.+.-...-+|+|+|.|.| .+...|+.+ ..++|||+.+... .+...+.++..+++- ..+
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G----~~~~~~~~~-----~~~v~~~D~~~~~------~~~a~~~~~~~~~~~~~~~ 105 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYG----VIGIALADE-----VKSTTMADINRRA------IKLAKENIKLNNLDNYDIR 105 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTS----HHHHHHGGG-----SSEEEEEESCHHH------HHHHHHHHHHTTCTTSCEE
T ss_pred HHHHHHHcccCCCCeEEEeCCCCC----HHHHHHHHc-----CCeEEEEECCHHH------HHHHHHHHHHcCCCccceE
Confidence 355666665445668999999998 345556665 2389999976421 233344455556541 133
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEee
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVEQ 405 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvEq 405 (540)
++...+.. . +.-..=+.|+.|..+ |+- ......+|+.+ +.|+|.-.+++..
T Consensus 106 ~~~~d~~~-~-----~~~~~~D~v~~~~~~--~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 106 VVHSDLYE-N-----VKDRKYNKIITNPPI--RAG----KEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp EEECSTTT-T-----CTTSCEEEEEECCCS--TTC----HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECchhc-c-----cccCCceEEEECCCc--ccc----hhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 33322110 0 111122455555443 431 12355666654 6789987776643
No 75
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=77.19 E-value=10 Score=33.02 Aligned_cols=103 Identities=11% Similarity=0.057 Sum_probs=57.3
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEEEe
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFSMI 344 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~~v 344 (540)
.|++.+.-...-+|+|+|.|.|. +...|+. +..++|||+.+.. ..+...+.++..++ ++.|...
T Consensus 26 ~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~~~~~~ 90 (183)
T 2yxd_A 26 VSIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYLDG------AIEVTKQNLAKFNIKNCQIIKG 90 (183)
T ss_dssp HHHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECSHH------HHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCCHH------HHHHHHHHHHHcCCCcEEEEEC
Confidence 34444444445589999999985 4455554 4569999997642 23334445556665 3443221
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~Pkvvvlv 403 (540)
. +. . .+.-..=+.++.+.. .....+|+.++++ |.-.+++
T Consensus 91 d--~~--~----~~~~~~~D~i~~~~~-----------~~~~~~l~~~~~~-~gG~l~~ 129 (183)
T 2yxd_A 91 R--AE--D----VLDKLEFNKAFIGGT-----------KNIEKIIEILDKK-KINHIVA 129 (183)
T ss_dssp C--HH--H----HGGGCCCSEEEECSC-----------SCHHHHHHHHHHT-TCCEEEE
T ss_pred C--cc--c----cccCCCCcEEEECCc-----------ccHHHHHHHHhhC-CCCEEEE
Confidence 1 10 0 011112245554443 2357889999888 8765554
No 76
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=77.16 E-value=2.5 Score=43.46 Aligned_cols=109 Identities=17% Similarity=0.291 Sum_probs=62.7
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++|||+.+.. ..+.|++.+++..-.+..
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s~~----------~~~~a~~~~~~~~~~~~~ 158 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPSSG----------VAAKAREKGIRVRTDFFE 158 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCCHH----------HHHHHHTTTCCEECSCCS
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCCHH----------HHHHHHHcCCCcceeeec
Confidence 45555554456689999999997 55666654 2 28999998642 223444445443221111
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
. -....+....+..=+|-+...|||+.+ ...+|+.+ +.|+|.-+++++
T Consensus 159 ~------~~~~~l~~~~~~fD~I~~~~vl~h~~d-----~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 159 K------ATADDVRRTEGPANVIYAANTLCHIPY-----VQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp H------HHHHHHHHHHCCEEEEEEESCGGGCTT-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred h------hhHhhcccCCCCEEEEEECChHHhcCC-----HHHHHHHHHHHcCCCeEEEEE
Confidence 0 011112222344445666777899853 45566655 678998777665
No 77
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=77.16 E-value=53 Score=31.47 Aligned_cols=106 Identities=18% Similarity=0.127 Sum_probs=59.8
Q ss_pred CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCC
Q 009215 274 KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLL 353 (540)
Q Consensus 274 ~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l 353 (540)
.+...|+|+|.|.| .+...|+.+- |+..++|||+.+.. ..+...+.+...+.++.|.... +. .+
T Consensus 21 ~~~~~vLDiGcG~G----~~~~~l~~~~--~~~~~v~gvD~s~~------~~~~a~~~~~~~~~~v~~~~~d--~~--~~ 84 (284)
T 3gu3_A 21 TKPVHIVDYGCGYG----YLGLVLMPLL--PEGSKYTGIDSGET------LLAEARELFRLLPYDSEFLEGD--AT--EI 84 (284)
T ss_dssp CSCCEEEEETCTTT----HHHHHHTTTS--CTTCEEEEEESCHH------HHHHHHHHHHSSSSEEEEEESC--TT--TC
T ss_pred CCCCeEEEecCCCC----HHHHHHHHhC--CCCCEEEEEECCHH------HHHHHHHHHHhcCCceEEEEcc--hh--hc
Confidence 34578999999999 3555566552 33478999998642 1223344455555555444322 21 11
Q ss_pred cccccCccCCceEEEEeccccccccccccchHHHHHH-HHHhcCCcEEEEE-eec
Q 009215 354 TRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQ-AIKRLNPTLLTVV-EQD 406 (540)
Q Consensus 354 ~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~-~Ir~L~Pkvvvlv-Eqe 406 (540)
.. ++..=+|-+...|||+.+ + +.+|+ ..+.|+|.-.+++ +.+
T Consensus 85 -----~~-~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 85 -----EL-NDKYDIAICHAFLLHMTT----P-ETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -----CC-SSCEEEEEEESCGGGCSS----H-HHHHHHHHHTEEEEEEEEEEECC
T ss_pred -----Cc-CCCeeEEEECChhhcCCC----H-HHHHHHHHHHcCCCCEEEEEecc
Confidence 11 233334445566788743 3 35555 4578899877754 444
No 78
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=76.70 E-value=12 Score=34.12 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=26.0
Q ss_pred HHHhhhcC-CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 266 AIRQAAQG-KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 266 AILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
.|++.+.. ...-+|+|+|.|.|. +...|+ .++|||+.+..
T Consensus 57 ~~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~--------~~v~~~D~s~~ 97 (215)
T 2zfu_A 57 RIARDLRQRPASLVVADFGCGDCR----LASSIR--------NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHHTSCTTSCEEEETCTTCH----HHHHCC--------SCEEEEESSCS
T ss_pred HHHHHHhccCCCCeEEEECCcCCH----HHHHhh--------ccEEEEeCCCC
Confidence 35555542 234689999999985 334442 47999998653
No 79
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=76.56 E-value=18 Score=36.39 Aligned_cols=116 Identities=16% Similarity=0.100 Sum_probs=63.9
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSM 343 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~ 343 (540)
.++|++.+...+.-+|+|+|.|.|. |...++.++ .-++|||+.+. . . +...+.++..|+.=..++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s~-~--~----~~a~~~~~~~~l~~~v~~ 103 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAST-M--A----QHAEVLVKSNNLTDRIVV 103 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECST-H--H----HHHHHHHHHTTCTTTEEE
T ss_pred HHHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCHH-H--H----HHHHHHHHHcCCCCcEEE
Confidence 3677777765555689999999984 555566552 34899999863 2 1 223334455555322333
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
+...+. ++. +. ..=+.|+.+ .-++|+..+ ...+.+...-+.|+|.-+++..
T Consensus 104 ~~~d~~--~~~---~~-~~~D~Ivs~--~~~~~~~~~--~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 104 IPGKVE--EVS---LP-EQVDIIISE--PMGYMLFNE--RMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EESCTT--TCC---CS-SCEEEEEEC--CCBTTBTTT--SHHHHHHHGGGGEEEEEEEESC
T ss_pred EEcchh--hCC---CC-CceeEEEEe--CchhcCChH--HHHHHHHHHHhhcCCCeEEEEe
Confidence 332221 111 11 111334333 235566543 3455565556889999888743
No 80
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=76.14 E-value=19 Score=34.16 Aligned_cols=107 Identities=12% Similarity=0.046 Sum_probs=57.4
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|.--.. |+.++ ..++|||+.+.. ..+...+.+...++.-..+++...+. .+
T Consensus 65 ~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s~~------~~~~a~~~~~~~~~~~~v~~~~~d~~--~~-- 126 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIAEV------SINDARVRARNMKRRFKVFFRAQDSY--GR-- 126 (298)
T ss_dssp TCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESCHH------HHHHHHHHHHTSCCSSEEEEEESCTT--TS--
T ss_pred CCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECCHH------HHHHHHHHHHhcCCCccEEEEECCcc--cc--
Confidence 35899999999953332 44432 348999998642 22334445555565333444442221 11
Q ss_pred cccCc-cCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDL-REGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i-~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
.. .++..=+|-|...|||+... ......+|+.+ +.|+|.-.+++.
T Consensus 127 ---~~~~~~~fD~v~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 127 ---HMDLGKEFDVISSQFSFHYAFST-SESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp ---CCCCSSCEEEEEEESCGGGGGSS-HHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---ccCCCCCcCEEEECchhhhhcCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 11 12323234445567775332 23355666655 778998777653
No 81
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=76.10 E-value=12 Score=38.45 Aligned_cols=121 Identities=9% Similarity=0.058 Sum_probs=66.9
Q ss_pred hhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--ee
Q 009215 263 ANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LE 340 (540)
Q Consensus 263 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~e 340 (540)
..+.+++.+.....-+|+|+|.|.|. +...|+.+. |..++|||+.+.. ..+...+.++..++. ..
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s~~------al~~Ar~n~~~ngl~~~~~ 276 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDESPM------AVASSRLNVETNMPEALDR 276 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESCHH------HHHHHHHHHHHHCGGGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECcHH------HHHHHHHHHHHcCCCcCce
Confidence 45578888876666789999999993 444455442 4569999998642 223334445555543 23
Q ss_pred EEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 341 FSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 341 F~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
++++...+. + .+.-..=+.|+.|-.|+-..-.. ......+|+.+ +.|+|.-.+++.
T Consensus 277 v~~~~~D~~----~--~~~~~~fD~Ii~nppfh~~~~~~--~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 277 CEFMINNAL----S--GVEPFRFNAVLCNPPFHQQHALT--DNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp EEEEECSTT----T--TCCTTCEEEEEECCCC---------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEechhh----c--cCCCCCeeEEEECCCcccCcccC--HHHHHHHHHHHHHhCCCCcEEEEE
Confidence 344432221 1 11111235677776663221121 23344667666 568998887664
No 82
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=75.78 E-value=6.6 Score=38.96 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=62.7
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
--.|+|+|.|.| .|--.+. |..+++|++-+. ..++-+.+++..+|+++.|........+
T Consensus 106 p~~VLDlGCG~g----pLal~~~------~~~~y~a~DId~------~~i~~ar~~~~~~g~~~~~~v~D~~~~~----- 164 (253)
T 3frh_A 106 PRRVLDIACGLN----PLALYER------GIASVWGCDIHQ------GLGDVITPFAREKDWDFTFALQDVLCAP----- 164 (253)
T ss_dssp CSEEEEETCTTT----HHHHHHT------TCSEEEEEESBH------HHHHHHHHHHHHTTCEEEEEECCTTTSC-----
T ss_pred CCeEEEecCCcc----HHHHHhc------cCCeEEEEeCCH------HHHHHHHHHHHhcCCCceEEEeecccCC-----
Confidence 348999999887 2222222 778999999764 2355566777777877776665422111
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEee
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVEQ 405 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvEq 405 (540)
+ ..+.+++.+ ...+|+|-+. .+...++.+.+|+|..||+.=+
T Consensus 165 --~-~~~~DvvLl--lk~lh~LE~q---~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 165 --P-AEAGDLALI--FKLLPLLERE---QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp --C-CCBCSEEEE--ESCHHHHHHH---STTHHHHHHHHCBCSEEEEEEE
T ss_pred --C-CCCcchHHH--HHHHHHhhhh---chhhHHHHHHHhcCCCEEEEcC
Confidence 1 113444444 3455777554 2335558888999999888754
No 83
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=75.64 E-value=12 Score=35.43 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=56.4
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.| .+...|+.+ |+ ++|||+.+... .+.|++..-++.|. ...+. .
T Consensus 51 ~~~vLDiGcG~G----~~~~~l~~~--~~---~v~gvD~s~~~----------~~~a~~~~~~~~~~--~~d~~--~--- 104 (263)
T 3pfg_A 51 AASLLDVACGTG----MHLRHLADS--FG---TVEGLELSADM----------LAIARRRNPDAVLH--HGDMR--D--- 104 (263)
T ss_dssp CCEEEEETCTTS----HHHHHHTTT--SS---EEEEEESCHHH----------HHHHHHHCTTSEEE--ECCTT--T---
T ss_pred CCcEEEeCCcCC----HHHHHHHHc--CC---eEEEEECCHHH----------HHHHHhhCCCCEEE--ECChH--H---
Confidence 357999999998 466677766 32 79999986421 11222211133332 21111 1
Q ss_pred cccCccCCceEEEEecc-ccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIM-HLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~-~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
+.. ++..=+|-|.. .|||+.+. .....+|+.+ +.|+|.-+++++
T Consensus 105 --~~~-~~~fD~v~~~~~~l~~~~~~--~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 105 --FSL-GRRFSAVTCMFSSIGHLAGQ--AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp --CCC-SCCEEEEEECTTGGGGSCHH--HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --CCc-cCCcCEEEEcCchhhhcCCH--HHHHHHHHHHHHhcCCCcEEEEE
Confidence 112 33333455665 78898642 3456666665 678999888885
No 84
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=75.47 E-value=19 Score=35.88 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=58.9
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
+|++...-.+.-+|+|+|.|.|. |...++.++ .-+++||+.+ .. .+...+.++..++.=...++.
T Consensus 29 ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~v~~vD~s-~~------~~~a~~~~~~~~~~~~i~~~~ 93 (328)
T 1g6q_1 29 AIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKHG----AKHVIGVDMS-SI------IEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp HHHHHHHHHTTCEEEEETCTTSH----HHHHHHHTC----CSEEEEEESS-TH------HHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHhhHhhcCCCEEEEecCccHH----HHHHHHHCC----CCEEEEEChH-HH------HHHHHHHHHHcCCCCCEEEEE
Confidence 44444332333589999999994 444556552 2489999986 32 122334445555532233343
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
..+. ++. +....=++|+.+.+ .+.+..+ ...+.+|..+ +-|+|.-.++.
T Consensus 94 ~d~~--~~~---~~~~~~D~Ivs~~~--~~~l~~~--~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 94 GKLE--DVH---LPFPKVDIIISEWM--GYFLLYE--SMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCTT--TSC---CSSSCEEEEEECCC--BTTBSTT--CCHHHHHHHHHHHEEEEEEEES
T ss_pred Cchh--hcc---CCCCcccEEEEeCc--hhhcccH--HHHHHHHHHHHhhcCCCeEEEE
Confidence 2221 111 11111234444433 2334333 3466777766 78999988764
No 85
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=75.44 E-value=7.7 Score=41.39 Aligned_cols=123 Identities=9% Similarity=0.034 Sum_probs=68.6
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHH-HhHHHHHHHHHhcCCc-eeE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELK-ASMKPVLHDATSLGIN-LEF 341 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~-~~~~~L~~~a~~fgl~-~eF 341 (540)
-+.|++.+.-...=+|+|+|.|.| .+.-.+|.+.+ .-+++||+.+....+.. ...++..++++.+|+. -.+
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG----~l~l~lA~~~g---~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rV 234 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVG----QVVLQVAAATN---CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEY 234 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTS----HHHHHHHHHCC---CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEE
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCC----HHHHHHHHHCC---CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence 345666665445567999999998 34444454332 23899999875432222 1222333456667762 355
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVV 403 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~Pkvvvlv 403 (540)
.++...+. .+.... .+..-.+|++|..+ +. ++....+....|.|+|--.+++
T Consensus 235 efi~GD~~--~lp~~d-~~~~aDVVf~Nn~~--F~-----pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 235 TLERGDFL--SEEWRE-RIANTSVIFVNNFA--FG-----PEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EEEECCTT--SHHHHH-HHHTCSEEEECCTT--CC-----HHHHHHHHHHHTTSCTTCEEEE
T ss_pred EEEECccc--CCcccc-ccCCccEEEEcccc--cC-----chHHHHHHHHHHcCCCCcEEEE
Confidence 55543221 111100 01234577777654 21 2456666667799999887766
No 86
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=75.08 E-value=7.1 Score=37.51 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=62.4
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc---eeE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN---LEF 341 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~---~eF 341 (540)
+.|++.+.....-+|+|+|.|.|. +...|+.+ |+ ++|||+.+... .+...+.+...+.. -.+
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s~~~------l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDASDKM------LKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESCHHH------HHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECCHHH------HHHHHHhhhhccccccccee
Confidence 445555554456789999999994 44555555 32 99999986432 11122222221211 122
Q ss_pred EEeeccCCCCCCcccccCccCCceEEEEec-ccccccccc--ccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 342 SMISEPVTPSLLTRENLDLREGEALFVNSI-MHLHKYVKE--SRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 342 ~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~-~~LH~L~~e--s~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
.++.... ..+. .++ ...+..=+|-|. ..|||+.+- +......+|+.+ +.|+|.-.+++.
T Consensus 112 ~~~~~d~--~~~~-~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 112 VIEEANW--LTLD-KDV-PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp EEEECCG--GGHH-HHS-CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEeecCh--hhCc-ccc-ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2222111 1111 011 223444445555 678898761 123456677665 668998766653
No 87
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=74.91 E-value=19 Score=36.00 Aligned_cols=144 Identities=15% Similarity=0.126 Sum_probs=74.0
Q ss_pred HHHHHHhcCCcchhhhHhhhHHHHhhh----cCCCe-eEEEEccCCCCCc--hHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 245 AFQLVYQTTPYISFGFMAANEAIRQAA----QGKDS-LHIIDLGMERTLQ--WPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 245 A~~~f~e~sP~~kfahftANqAILEA~----~g~~~-VHIIDfgI~~G~Q--WpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
+-..+.+..|-+. ...-+|.+-+.-+ .++.. =+|+|+|.|.|.. --.+.|.++ |.-|||+|+.+..
T Consensus 44 ~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~sp~ 116 (277)
T 3giw_A 44 AGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECCHH
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCChH
Confidence 4556677889874 3344777776643 23323 3799999997542 223333332 4569999998642
Q ss_pred hhHHHHhHHHHHHHHHhcCCceeEEEeeccCCC-CC-Cccc--ccCccCCceEEEEeccccccccccccchHHHHHHHHH
Q 009215 318 LSELKASMKPVLHDATSLGINLEFSMISEPVTP-SL-LTRE--NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIK 393 (540)
Q Consensus 318 ~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~-~~-l~~~--~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir 393 (540)
. +.... +.+...+ .-...++...+.. .. +... .-.++.++.++|-+...||||.++ ..+...+=+..+
T Consensus 117 m--La~Ar----~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~-~~p~~~l~~l~~ 188 (277)
T 3giw_A 117 V--LTLSQ----GLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDE-DDAVGIVRRLLE 188 (277)
T ss_dssp H--HHTTH----HHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGG-GCHHHHHHHHHT
T ss_pred H--HHHHH----HHhccCC-CCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCch-hhHHHHHHHHHH
Confidence 1 11111 1222211 1123444322211 00 0000 001333555567778889999875 223444445567
Q ss_pred hcCCcEEEEE
Q 009215 394 RLNPTLLTVV 403 (540)
Q Consensus 394 ~L~Pkvvvlv 403 (540)
.|+|--.+++
T Consensus 189 ~L~PGG~Lvl 198 (277)
T 3giw_A 189 PLPSGSYLAM 198 (277)
T ss_dssp TSCTTCEEEE
T ss_pred hCCCCcEEEE
Confidence 7899765543
No 88
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=74.87 E-value=15 Score=33.72 Aligned_cols=33 Identities=6% Similarity=0.028 Sum_probs=24.1
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..-+|+|+|.|.|. +...||.+ | .++|||+.+.
T Consensus 22 ~~~~vLD~GCG~G~----~~~~la~~--g---~~V~gvD~S~ 54 (203)
T 1pjz_A 22 PGARVLVPLCGKSQ----DMSWLSGQ--G---YHVVGAELSE 54 (203)
T ss_dssp TTCEEEETTTCCSH----HHHHHHHH--C---CEEEEEEECH
T ss_pred CCCEEEEeCCCCcH----hHHHHHHC--C---CeEEEEeCCH
Confidence 34589999999983 44556665 2 3899999875
No 89
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=74.72 E-value=21 Score=34.90 Aligned_cols=112 Identities=10% Similarity=0.070 Sum_probs=56.1
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC------CceeEEEeeccC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG------INLEFSMISEPV 348 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg------l~~eF~~v~~~~ 348 (540)
..-+|+|+|.|.|.- ...|+.++ .-++|||+.+... + +...+++...+ .....+++...+
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s~~~--l----~~a~~~~~~~~~~~~~~~~~~~~~~~~D~ 99 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIADVS--V----KQCQQRYEDMKNRRDSEYIFSAEFITADS 99 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESCHHH--H----HHHHHHHHHHHSSSCC-CCCEEEEEECCT
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCCHHH--H----HHHHHHHHHhhhcccccccceEEEEEecc
Confidence 456899999999863 33444432 3489999976421 1 12222222221 112233333222
Q ss_pred CCCCCcc-cccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 349 TPSLLTR-ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 349 ~~~~l~~-~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
. .+.. +.+...++..=+|-|.+.||++... ......+|+.+ +.|+|.-++++
T Consensus 100 ~--~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-~~~~~~~l~~~~~~LkpgG~li~ 153 (313)
T 3bgv_A 100 S--KELLIDKFRDPQMCFDICSCQFVCHYSFES-YEQADMMLRNACERLSPGGYFIG 153 (313)
T ss_dssp T--TSCSTTTCSSTTCCEEEEEEETCGGGGGGS-HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred c--ccchhhhcccCCCCEEEEEEecchhhccCC-HHHHHHHHHHHHHHhCCCcEEEE
Confidence 1 1110 0111112233345566788887332 23455677766 67899877765
No 90
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=73.76 E-value=24 Score=32.82 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=53.5
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLT 354 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~ 354 (540)
..-+|+|+|.|.|.- ...|+.+ | .++|||+.+... .+...+.+....-++.|.... ..
T Consensus 39 ~~~~vLDiG~G~G~~----~~~l~~~--~---~~v~~vD~s~~~------~~~a~~~~~~~~~~~~~~~~d--~~----- 96 (263)
T 2yqz_A 39 EEPVFLELGVGTGRI----ALPLIAR--G---YRYIALDADAAM------LEVFRQKIAGVDRKVQVVQAD--AR----- 96 (263)
T ss_dssp SCCEEEEETCTTSTT----HHHHHTT--T---CEEEEEESCHHH------HHHHHHHTTTSCTTEEEEESC--TT-----
T ss_pred CCCEEEEeCCcCCHH----HHHHHHC--C---CEEEEEECCHHH------HHHHHHHhhccCCceEEEEcc--cc-----
Confidence 446899999999853 3345554 2 389999986421 111222221112334443221 11
Q ss_pred ccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 355 RENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 355 ~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
.+.+.++..=+|-+...+||+.+ ...+|+. .+.|+|.-.+++.
T Consensus 97 --~~~~~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 97 --AIPLPDESVHGVIVVHLWHLVPD-----WPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --SCCSCTTCEEEEEEESCGGGCTT-----HHHHHHHHHHHEEEEEEEEEE
T ss_pred --cCCCCCCCeeEEEECCchhhcCC-----HHHHHHHHHHHCCCCcEEEEE
Confidence 12222333334445667788753 3455555 4778998766554
No 91
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=73.74 E-value=7.8 Score=38.93 Aligned_cols=43 Identities=12% Similarity=0.088 Sum_probs=28.2
Q ss_pred HHHhhh--cCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCC
Q 009215 266 AIRQAA--QGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISN 315 (540)
Q Consensus 266 AILEA~--~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~ 315 (540)
.|++.+ .-...-+|+|+|.|.|. +...|+.+- |.+++|+++.+
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 226 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQP 226 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECH
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccH
Confidence 466655 11233589999999994 555555542 56789999863
No 92
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=73.72 E-value=49 Score=29.48 Aligned_cols=98 Identities=13% Similarity=0.108 Sum_probs=51.9
Q ss_pred EEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcccc
Q 009215 278 HIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTREN 357 (540)
Q Consensus 278 HIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~~ 357 (540)
.|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.++..++++.|.... +. .+.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~---~~v~~vD~s~~------~~~~a~~~~~~~~~~~~~~~~d--~~--~~~--- 89 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G---YEVTAVDQSSV------GLAKAKQLAQEKGVKITTVQSN--LA--DFD--- 89 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T---CEEEEECSSHH------HHHHHHHHHHHHTCCEEEECCB--TT--TBS---
T ss_pred CEEEECCCCCH----hHHHHHhC--C---CeEEEEECCHH------HHHHHHHHHHhcCCceEEEEcC--hh--hcC---
Confidence 89999999884 45566665 2 38999997642 1223334444445544443221 11 111
Q ss_pred cCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 358 LDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 358 L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
+.-..=+.|+.+ + .|+. ......+|+.+ +.|+|.-.+++.
T Consensus 90 ~~~~~fD~v~~~--~--~~~~---~~~~~~~l~~~~~~L~pgG~l~~~ 130 (202)
T 2kw5_A 90 IVADAWEGIVSI--F--CHLP---SSLRQQLYPKVYQGLKPGGVFILE 130 (202)
T ss_dssp CCTTTCSEEEEE--C--CCCC---HHHHHHHHHHHHTTCCSSEEEEEE
T ss_pred CCcCCccEEEEE--h--hcCC---HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 111122444432 2 3332 23456666665 668998777654
No 93
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=71.97 E-value=55 Score=29.79 Aligned_cols=23 Identities=13% Similarity=0.189 Sum_probs=18.1
Q ss_pred ccchHHHHHHHhcCCCeeecCCc
Q 009215 470 HERAHQWRRQLGRAGFQLVGLKS 492 (540)
Q Consensus 470 hE~~~~Wr~rm~rAGF~~vpls~ 492 (540)
.-..+.|...++.+||+.+....
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEec
Confidence 34577899999999999876543
No 94
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=70.67 E-value=21 Score=31.92 Aligned_cols=111 Identities=14% Similarity=0.040 Sum_probs=54.6
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-.|+|+|.|.|. +...|+.+-+ |.-++|||+.+.. ..+...+.++..|+.-..+++...+ ..+.
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s~~------~~~~a~~~~~~~~~~~~v~~~~~d~--~~~~-- 87 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQDK------AIANTTKKLTDLNLIDRVTLIKDGH--QNMD-- 87 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSCHH------HHHHHHHHHHHTTCGGGEEEECSCG--GGGG--
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECCHH------HHHHHHHHHHHcCCCCCeEEEECCH--HHHh--
Confidence 379999999993 3334444411 2238999998642 2333445566666632344443211 1111
Q ss_pred ccCccCCceEEEEecccc---ccccccccchHHHHHHHHHhcCCcEEEEE
Q 009215 357 NLDLREGEALFVNSIMHL---HKYVKESRGSLKAILQAIKRLNPTLLTVV 403 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~L---H~L~~es~~~r~~~L~~Ir~L~Pkvvvlv 403 (540)
...-..=+.|+.|..+.- |+.........+.+-...+.|+|.-.+++
T Consensus 88 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 88 KYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp GTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 010112356777765511 11221111223433444577999866654
No 95
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=68.64 E-value=52 Score=32.95 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=60.6
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
++|++.+.-.+.-.|+|+|.|.|. +...|+.+ | .-+++||+.+. . + +...+.++..|+.=...++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g--~~~v~gvD~s~-~--~----~~a~~~~~~~~~~~~i~~~ 118 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA--G--AKKVLGVDQSE-I--L----YQAMDIIRLNKLEDTITLI 118 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT--T--CSEEEEEESST-H--H----HHHHHHHHHTTCTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc--C--CCEEEEEChHH-H--H----HHHHHHHHHcCCCCcEEEE
Confidence 456555544444589999999994 44556655 2 24899999863 2 1 2233344555542223333
Q ss_pred eccCCCCCCcccccCccCCceEEEEec-cccccccccccchHHHHHHHH-HhcCCcEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSI-MHLHKYVKESRGSLKAILQAI-KRLNPTLLTV 402 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~-~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvl 402 (540)
...+. ++. +....=++|+.|.+ +.+++ ...++.+|+.+ |.|+|.-.++
T Consensus 119 ~~d~~--~~~---~~~~~~D~Ivs~~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 119 KGKIE--EVH---LPVEKVDVIISEWMGYFLLF-----ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ESCTT--TSC---CSCSCEEEEEECCCBTTBTT-----TCHHHHHHHHHHHHEEEEEEEE
T ss_pred EeeHH--Hhc---CCCCcEEEEEEcCchhhccC-----HHHHHHHHHHHHhhcCCCcEEE
Confidence 32221 111 11111245555542 23332 23566777776 7799988776
No 96
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=68.52 E-value=12 Score=34.93 Aligned_cols=107 Identities=16% Similarity=0.080 Sum_probs=57.3
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.+++.+.....-+|+|+|.|.|.--..|.+.+ |..++|||+.+... .+.+++..-++.|....
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s~~~----------~~~a~~~~~~~~~~~~d 86 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSDDDM----------LEKAADRLPNTNFGKAD 86 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESCHHH----------HHHHHHHSTTSEEEECC
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECCHHH----------HHHHHHhCCCcEEEECC
Confidence 45555544455689999999996544444443 23479999976421 11222212233443221
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
+ .. +. .++..=+|-+...|||+.+ ...+|+.+ +.|+|.-.+++.
T Consensus 87 --~--~~-----~~-~~~~fD~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 87 --L--AT-----WK-PAQKADLLYANAVFQWVPD-----HLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp --T--TT-----CC-CSSCEEEEEEESCGGGSTT-----HHHHHHHHGGGEEEEEEEEEE
T ss_pred --h--hh-----cC-ccCCcCEEEEeCchhhCCC-----HHHHHHHHHHhcCCCeEEEEE
Confidence 1 11 11 1232334445667788742 45566665 788998766553
No 97
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=67.81 E-value=13 Score=37.13 Aligned_cols=33 Identities=12% Similarity=0.191 Sum_probs=24.2
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLIS 314 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~ 314 (540)
..-+|+|+|.|.|. +...|+.+- |.+++|+++.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 34689999999993 555555542 4578999997
No 98
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=67.69 E-value=27 Score=33.63 Aligned_cols=33 Identities=12% Similarity=0.171 Sum_probs=24.9
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..-.|+|+|.|.|. +...||.+ | .++|||+.+.
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~--G---~~V~gvD~S~ 100 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR--G---HTVVGVEISE 100 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT--T---CEEEEECSCH
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC--C---CeEEEEECCH
Confidence 45689999999984 45667766 3 3899999875
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=67.00 E-value=54 Score=28.30 Aligned_cols=61 Identities=18% Similarity=0.267 Sum_probs=39.6
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN 338 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~ 338 (540)
+.+++.+.-...-+|+|+|.|.| .+...|+.+- |..++|||+.+.. ..+...+.++..+++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~~~------~~~~a~~~~~~~~~~ 75 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEISEE------RRERILSNAINLGVS 75 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSCHH------HHHHHHHHHHTTTCT
T ss_pred HHHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCCHH------HHHHHHHHHHHhCCC
Confidence 34455555555678999999988 4555566553 5689999998642 233344556666765
No 100
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=66.70 E-value=10 Score=33.35 Aligned_cols=109 Identities=14% Similarity=0.121 Sum_probs=58.7
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|. +...|+.++ .-++|||+.+.. ..+...+.++..++.=..+++...+ ....
T Consensus 32 ~~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~~~~~~~d~--~~~~- 94 (177)
T 2esr_A 32 GGRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEKNRK------AQAIIQDNIIMTKAENRFTLLKMEA--ERAI- 94 (177)
T ss_dssp SCEEEEETCTTCH----HHHHHHHTT----CCEEEEECCCHH------HHHHHHHHHHTTTCGGGEEEECSCH--HHHH-
T ss_pred CCeEEEeCCCCCH----HHHHHHHcC----CCEEEEEECCHH------HHHHHHHHHHHcCCCCceEEEECcH--HHhH-
Confidence 3479999999983 444556552 358999997642 2333445566666542233332111 0000
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHH---HhcCCcEEEEEeecCCCC
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI---KRLNPTLLTVVEQDANHN 410 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I---r~L~PkvvvlvEqea~hn 410 (540)
..+ -..=+.|+.|..+.. ...+.+++.+ +.|+|.-+++++......
T Consensus 95 ~~~-~~~fD~i~~~~~~~~--------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 DCL-TGRFDLVFLDPPYAK--------ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HHB-CSCEEEEEECCSSHH--------HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred Hhh-cCCCCEEEECCCCCc--------chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 000 011256666655421 1244556665 678999888877655443
No 101
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=66.38 E-value=10 Score=38.10 Aligned_cols=118 Identities=14% Similarity=0.163 Sum_probs=64.7
Q ss_pred hhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEE
Q 009215 263 ANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFS 342 (540)
Q Consensus 263 ANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~ 342 (540)
..+.|++.+.....-+|+|+|.|.|. +...|+.+ + |..++|||+.+... .+...+.++..++...|
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~~~~la~~--~-~~~~v~~vD~s~~~------l~~a~~~~~~~~~~~~~- 249 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGV----LSVAFARH--S-PKIRLTLCDVSAPA------VEASRATLAANGVEGEV- 249 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSH----HHHHHHHH--C-TTCBCEEEESBHHH------HHHHHHHHHHTTCCCEE-
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCH----HHHHHHHH--C-CCCEEEEEECCHHH------HHHHHHHHHHhCCCCEE-
Confidence 45778888743334479999999985 33444443 2 45689999976421 22333444555665544
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
+..... + .....=+.|+.|..| |+...........+|+.+ +.|+|.-.+++.
T Consensus 250 -~~~d~~----~---~~~~~fD~Iv~~~~~--~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 250 -FASNVF----S---EVKGRFDMIISNPPF--HDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp -EECSTT----T---TCCSCEEEEEECCCC--CSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred -EEcccc----c---cccCCeeEEEECCCc--ccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 322111 1 011122456666554 442221123456677765 678998877664
No 102
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=66.37 E-value=22 Score=31.99 Aligned_cols=46 Identities=30% Similarity=0.476 Sum_probs=34.5
Q ss_pred hhhHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 262 AANEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 262 tANqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
...+.|++.+.....-+|+|+|.|.| .+...|+.+ | .++|||+.+.
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G----~~~~~l~~~--~---~~v~~vD~s~ 84 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEG----WLLRALADR--G---IEAVGVDGDR 84 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTC----HHHHHHHTT--T---CEEEEEESCH
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCC----HHHHHHHHC--C---CEEEEEcCCH
Confidence 35567777777666689999999999 456677766 2 2899999864
No 103
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=65.96 E-value=21 Score=30.98 Aligned_cols=102 Identities=9% Similarity=0.053 Sum_probs=55.5
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.+++.+.-...-.|+|+|.|.|. +...|+.+. . ++|||+.+... . +.+++..-++.|....
T Consensus 8 ~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s~~~------~----~~a~~~~~~v~~~~~d 68 (170)
T 3i9f_A 8 EYLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDINVIA------L----KEVKEKFDSVITLSDP 68 (170)
T ss_dssp TTHHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSCHHH------H----HHHHHHCTTSEEESSG
T ss_pred HHHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCCHHH------H----HHHHHhCCCcEEEeCC
Confidence 34455555566789999999985 444555543 3 99999986421 1 1111111122222111
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
+....+..=+|-+...+||+.+ ...+|+. .+.|+|.-.+++
T Consensus 69 ------------~~~~~~~~D~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 69 ------------KEIPDNSVDFILFANSFHDMDD-----KQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp ------------GGSCTTCEEEEEEESCSTTCSC-----HHHHHHHHHHHEEEEEEEEE
T ss_pred ------------CCCCCCceEEEEEccchhcccC-----HHHHHHHHHHhcCCCCEEEE
Confidence 2222333334456667788742 3455554 578899776655
No 104
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=65.56 E-value=20 Score=32.83 Aligned_cols=103 Identities=15% Similarity=0.143 Sum_probs=54.4
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEEEeeccCCCCCCcc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~~v~~~~~~~~l~~ 355 (540)
-+|+|+|.|.|.-- ..|+.+. . -+||||+.+.. ..+...+.++..++ +++| +...+ .....
T Consensus 56 ~~vLDlgcG~G~~~----~~l~~~~--~--~~V~~vD~s~~------~l~~a~~~~~~~~~~~v~~--~~~D~--~~~~~ 117 (202)
T 2fpo_A 56 AQCLDCFAGSGALG----LEALSRY--A--AGATLIEMDRA------VSQQLIKNLATLKAGNARV--VNSNA--MSFLA 117 (202)
T ss_dssp CEEEETTCTTCHHH----HHHHHTT--C--SEEEEECSCHH------HHHHHHHHHHHTTCCSEEE--ECSCH--HHHHS
T ss_pred CeEEEeCCCcCHHH----HHHHhcC--C--CEEEEEECCHH------HHHHHHHHHHHcCCCcEEE--EECCH--HHHHh
Confidence 47999999998432 2223331 1 28999998642 23334445556665 3333 32111 00000
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHHHh---cCCcEEEEEeecC
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKR---LNPTLLTVVEQDA 407 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~---L~PkvvvlvEqea 407 (540)
..-..=+.|++|..|+ ....+.+++.+++ |+|.-+++++...
T Consensus 118 --~~~~~fD~V~~~~p~~--------~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 118 --QKGTPHNIVFVDPPFR--------RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp --SCCCCEEEEEECCSSS--------TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred --hcCCCCCEEEECCCCC--------CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 0001124666665543 1235677888776 9999887776443
No 105
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=65.16 E-value=16 Score=33.37 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=29.8
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
.++.+.-...-+|+|+|.|.|. +...|+.+ -|..++|||+.+..
T Consensus 19 ~~~~l~~~~~~~vLDiGcG~G~----~~~~la~~---~p~~~v~gvD~s~~ 62 (218)
T 3mq2_A 19 EFEQLRSQYDDVVLDVGTGDGK----HPYKVARQ---NPSRLVVALDADKS 62 (218)
T ss_dssp HHHHHHTTSSEEEEEESCTTCH----HHHHHHHH---CTTEEEEEEESCGG
T ss_pred HHHHhhccCCCEEEEecCCCCH----HHHHHHHH---CCCCEEEEEECCHH
Confidence 3444444566789999999994 44445544 25679999998753
No 106
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=65.14 E-value=25 Score=32.62 Aligned_cols=106 Identities=9% Similarity=0.052 Sum_probs=53.6
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLT 354 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~ 354 (540)
..-+|+|+|.|.|. +...|+.+. +. ++|||+.+.. ..+...++++..+.++.|.... + ..+.
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~~-~v~gvD~s~~------~l~~a~~~~~~~~~~v~~~~~d--~--~~~~ 121 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---ID-EHWIIECNDG------VFQRLRDWAPRQTHKVIPLKGL--W--EDVA 121 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---EE-EEEEEECCHH------HHHHHHHHGGGCSSEEEEEESC--H--HHHG
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---CC-eEEEEcCCHH------HHHHHHHHHHhcCCCeEEEecC--H--HHhh
Confidence 45689999999993 444555432 22 8999998642 2233334455555444443221 1 0110
Q ss_pred ccccCccCC--ceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 355 RENLDLREG--EALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 355 ~~~L~i~~~--EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
. .+.++ ++|+.+ .+.+ +........++.+|+.+ |-|+|.-+++.
T Consensus 122 -~--~~~~~~fD~V~~d-~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 122 -P--TLPDGHFDGILYD-TYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp -G--GSCTTCEEEEEEC-CCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred -c--ccCCCceEEEEEC-Cccc-chhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 0 12222 344441 3332 22111123455666654 77899988764
No 107
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=65.14 E-value=38 Score=30.49 Aligned_cols=106 Identities=11% Similarity=0.140 Sum_probs=58.6
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSM 343 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~ 343 (540)
.+.|++.+. ...-+|+|+|.|.| .+...|+.+ | .++|||+.+.. ..+.++.... ++
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~--~---~~~~~~D~~~~----------~~~~~~~~~~----~~ 77 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN--G---TRVSGIEAFPE----------AAEQAKEKLD----HV 77 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT--T---CEEEEEESSHH----------HHHHHHTTSS----EE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc--C---CeEEEEeCCHH----------HHHHHHHhCC----cE
Confidence 355666665 45678999999998 466677776 2 58999997642 1223332222 22
Q ss_pred eeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 344 ISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 344 v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
+...+. .+ .+.+.++..=+|-+...|||+.+ + ..+|+.+ +.|+|.-.+++
T Consensus 78 ~~~d~~--~~---~~~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 78 VLGDIE--TM---DMPYEEEQFDCVIFGDVLEHLFD----P-WAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp EESCTT--TC---CCCSCTTCEEEEEEESCGGGSSC----H-HHHHHHTGGGEEEEEEEEE
T ss_pred EEcchh--hc---CCCCCCCccCEEEECChhhhcCC----H-HHHHHHHHHHcCCCCEEEE
Confidence 322111 10 11222233323335566788753 2 4666665 66799866554
No 108
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=65.04 E-value=47 Score=32.11 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=55.2
Q ss_pred EEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcccc
Q 009215 278 HIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTREN 357 (540)
Q Consensus 278 HIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~~ 357 (540)
.|+|+|.|.|. +...|+.+- -++|||+.+... .+.|++. -++.| +... .++
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~~-----~~v~gvD~s~~m----------l~~a~~~-~~v~~--~~~~-------~e~ 92 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEFF-----ERVHAVDPGEAQ----------IRQALRH-PRVTY--AVAP-------AED 92 (257)
T ss_dssp EEEEESCTTTT----THHHHHTTC-----SEEEEEESCHHH----------HHTCCCC-TTEEE--EECC-------TTC
T ss_pred CEEEEcCCCCH----HHHHHHHhC-----CEEEEEeCcHHh----------hhhhhhc-CCcee--ehhh-------hhh
Confidence 58999999994 345566542 279999986421 1222222 13333 3221 123
Q ss_pred cCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE-EeecCCCCCC
Q 009215 358 LDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTV-VEQDANHNGP 412 (540)
Q Consensus 358 L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvl-vEqea~hnsp 412 (540)
+.+.++..=+|-|...+|++. .+.+|+.+ |-|+|.-+++ +........|
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~~------~~~~~~e~~rvLkpgG~l~~~~~~~~~~~~ 143 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWFD------LDRFWAELRRVARPGAVFAAVTYGLTRVDP 143 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTCC------HHHHHHHHHHHEEEEEEEEEEEECCCBCCH
T ss_pred hcccCCcccEEEEeeehhHhh------HHHHHHHHHHHcCCCCEEEEEECCCCCCCH
Confidence 344455555566677888862 23455544 7789988664 4444333333
No 109
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=61.84 E-value=49 Score=29.70 Aligned_cols=92 Identities=10% Similarity=0.183 Sum_probs=50.4
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-+|+|+|.|.|. +...|+.+ |+ . ++|||+.+.. ..+...+.++..++++ +++...+. .+.
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~~-~-~v~~vD~~~~------~~~~a~~~~~~~~~~~--~~~~~d~~--~~~- 110 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--GA-K-EVICVEVDKE------AVDVLIENLGEFKGKF--KVFIGDVS--EFN- 110 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--TC-S-EEEEEESCHH------HHHHHHHHTGGGTTSE--EEEESCGG--GCC-
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--CC-C-EEEEEECCHH------HHHHHHHHHHHcCCCE--EEEECchH--HcC-
Confidence 3579999999995 44556655 22 2 8999998642 2233444455556643 33332111 111
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHHHhcC
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLN 396 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~ 396 (540)
..=++|+.|.++... . .+....+|+.+.++-
T Consensus 111 -----~~~D~v~~~~p~~~~--~---~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 -----SRVDIVIMNPPFGSQ--R---KHADRPFLLKAFEIS 141 (207)
T ss_dssp -----CCCSEEEECCCCSSS--S---TTTTHHHHHHHHHHC
T ss_pred -----CCCCEEEEcCCCccc--c---CCchHHHHHHHHHhc
Confidence 133678888776432 1 123455666665554
No 110
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=61.04 E-value=17 Score=38.86 Aligned_cols=114 Identities=17% Similarity=0.115 Sum_probs=62.9
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
.+|++.+...+.-+|+|+|.|.|. +...|+.+ |..++|||+.+. . .+...+.++..|+.=..+++
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s~-~------l~~A~~~~~~~gl~~~v~~~ 212 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAST-M------AQHAEVLVKSNNLTDRIVVI 212 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECHH-H------HHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcHH-H------HHHHHHHHHHcCCCCcEEEE
Confidence 466776654455699999999985 44566654 345999999752 1 22233445555653223444
Q ss_pred eccCCCCCCcccccCcc-CCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 345 SEPVTPSLLTRENLDLR-EGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~-~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
...+. ++ .+. .=+.|+.|.+ ++++..+ ...+.+....+.|+|.-.++.+
T Consensus 213 ~~d~~--~~-----~~~~~fD~Ivs~~~--~~~~~~e--~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 213 PGKVE--EV-----SLPEQVDIIISEPM--GYMLFNE--RMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ESCTT--TC-----CCSSCEEEEECCCC--HHHHTCH--HHHHHHHHGGGGEEEEEEEESC
T ss_pred ECchh--hC-----ccCCCeEEEEEeCc--hHhcCcH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 32221 11 111 1134444333 3555433 3445555556789999888754
No 111
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=60.48 E-value=71 Score=32.79 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=63.4
Q ss_pred hHHHHhhhc------CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC
Q 009215 264 NEAIRQAAQ------GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI 337 (540)
Q Consensus 264 NqAILEA~~------g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl 337 (540)
.+.+++.+. ..+.-+|+|+|.|.|. +...|+.+ | .+||||+.+.. ..+...+.++..++
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~----~~~~la~~--g---~~V~gvDis~~------al~~A~~n~~~~~~ 280 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGA----LTLPLARM--G---AEVVGVEDDLA------SVLSLQKGLEANAL 280 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTST----THHHHHHT--T---CEEEEEESBHH------HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCH----HHHHHHHc--C---CEEEEEECCHH------HHHHHHHHHHHcCC
Confidence 345555552 1234589999999995 33444544 2 39999998642 23334445566666
Q ss_pred ceeEEEeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 338 NLEFSMISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 338 ~~eF~~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
.++|.... +. .... .-..=+.|+.|..+ |+-..........+++. .+.|+|.-.+++.
T Consensus 281 ~v~~~~~D--~~--~~~~---~~~~fD~Ii~npp~--~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 281 KAQALHSD--VD--EALT---EEARFDIIVTNPPF--HVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp CCEEEECS--TT--TTSC---TTCCEEEEEECCCC--CTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEEEcc--hh--hccc---cCCCeEEEEECCch--hhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 65443321 11 1110 01122566666665 44222212345566654 5788999888765
No 112
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=60.14 E-value=50 Score=34.34 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=59.7
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeec
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISE 346 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~ 346 (540)
+++.+.-...-.|+|+|.|.|.- ...||.+ .-+++||+.+.. ..+...+.++..|+. ..+++..
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~----~~~la~~-----~~~V~gvD~s~~------al~~A~~n~~~~~~~-~v~f~~~ 341 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNF----TLPLATQ-----AASVVGVEGVPA------LVEKGQQNARLNGLQ-NVTFYHE 341 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTT----HHHHHTT-----SSEEEEEESCHH------HHHHHHHHHHHTTCC-SEEEEEC
T ss_pred HHHhhcCCCCCEEEECCCCCCHH----HHHHHhh-----CCEEEEEeCCHH------HHHHHHHHHHHcCCC-ceEEEEC
Confidence 33444333334799999999953 3445655 248999998643 233344455666664 2333332
Q ss_pred cCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 009215 347 PVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVV 403 (540)
Q Consensus 347 ~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~Pkvvvlv 403 (540)
.+.. .+....+.-..=++|++|-.. .....+++.+..++|+.++.+
T Consensus 342 d~~~-~l~~~~~~~~~fD~Vv~dPPr----------~g~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 342 NLEE-DVTKQPWAKNGFDKVLLDPAR----------AGAAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp CTTS-CCSSSGGGTTCCSEEEECCCT----------TCCHHHHHHHHHHCCSEEEEE
T ss_pred CHHH-HhhhhhhhcCCCCEEEECCCC----------ccHHHHHHHHHhcCCCeEEEE
Confidence 2211 111000111123566665443 123468899999999998876
No 113
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=59.45 E-value=21 Score=35.05 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=30.2
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..|++.+.-...-+|+|+|.|.|. +-..||.+ + -++|||+.+.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~S~ 77 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDFSQ 77 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEESCH
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEECCH
Confidence 345666655555689999999985 55566665 2 2799999864
No 114
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=59.01 E-value=11 Score=40.85 Aligned_cols=84 Identities=23% Similarity=0.206 Sum_probs=51.3
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcC-CceeEEEeeccCCCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLG-INLEFSMISEPVTPSLL 353 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fg-l~~eF~~v~~~~~~~~l 353 (540)
+-+.|+|+|.|.|. |-..||.+ | -++|||+..... ++.--..|.+-| +++.|..... +++
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~~~~~------i~~a~~~a~~~~~~~~~~~~~~~----~~~ 126 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDFQQEN------INVCRALAEENPDFAAEFRVGRI----EEV 126 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESCHHH------HHHHHHHHHTSTTSEEEEEECCH----HHH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECCCHHH------HHHHHHHHHhcCCCceEEEECCH----HHH
Confidence 34789999999994 67778876 2 279999986432 222223455556 6777776541 111
Q ss_pred cccccCccCCceEEEEecccccccccc
Q 009215 354 TRENLDLREGEALFVNSIMHLHKYVKE 380 (540)
Q Consensus 354 ~~~~L~i~~~EaLaVN~~~~LH~L~~e 380 (540)
.. ...++..=+|-|+--|||+.+.
T Consensus 127 ~~---~~~~~~fD~v~~~e~~ehv~~~ 150 (569)
T 4azs_A 127 IA---ALEEGEFDLAIGLSVFHHIVHL 150 (569)
T ss_dssp HH---HCCTTSCSEEEEESCHHHHHHH
T ss_pred hh---hccCCCccEEEECcchhcCCCH
Confidence 00 1123334356778889999864
No 115
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=58.67 E-value=78 Score=28.33 Aligned_cols=110 Identities=17% Similarity=0.220 Sum_probs=58.9
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
..+++.+.-...-.|+|+|.|.|. +...|+.+ + |..++|||+.+.. ..+...+.++..+++ ..+++
T Consensus 30 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~s~~------~~~~a~~~~~~~~~~-~v~~~ 95 (204)
T 3e05_A 30 AVTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALERNPQ------YLGFIRDNLKKFVAR-NVTLV 95 (204)
T ss_dssp HHHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEECCHH------HHHHHHHHHHHHTCT-TEEEE
T ss_pred HHHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeCCHH------HHHHHHHHHHHhCCC-cEEEE
Confidence 345566655556689999999985 33344444 1 4569999998643 223344455555652 23333
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
..... ..+. ....-++++++..+ + ....+|+.+ +.|+|.-.+++
T Consensus 96 ~~d~~-~~~~----~~~~~D~i~~~~~~--~--------~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 96 EAFAP-EGLD----DLPDPDRVFIGGSG--G--------MLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp ECCTT-TTCT----TSCCCSEEEESCCT--T--------CHHHHHHHHHHHCCTTCEEEE
T ss_pred eCChh-hhhh----cCCCCCEEEECCCC--c--------CHHHHHHHHHHhcCCCeEEEE
Confidence 32211 0111 11223455554433 1 244556554 67899877766
No 116
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=57.47 E-value=76 Score=29.75 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=24.4
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..-.|+|+|.|.|. +...|+.+ | .++|||+.+.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s~ 86 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER--G---FEVVLVDPSK 86 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT--T---CEEEEEESCH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc--C---CeEEEEeCCH
Confidence 44589999999984 55566665 2 3899999864
No 117
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=55.99 E-value=28 Score=31.12 Aligned_cols=34 Identities=24% Similarity=0.220 Sum_probs=23.3
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..-.|+|+|.|.|. +...|+.+ |+. ++|||+.+.
T Consensus 42 ~~~~vLdiGcG~G~----~~~~l~~~--~~~--~v~~~D~s~ 75 (215)
T 2pxx_A 42 PEDRILVLGCGNSA----LSYELFLG--GFP--NVTSVDYSS 75 (215)
T ss_dssp TTCCEEEETCTTCS----HHHHHHHT--TCC--CEEEEESCH
T ss_pred CCCeEEEECCCCcH----HHHHHHHc--CCC--cEEEEeCCH
Confidence 34579999999984 33445544 333 899999864
No 118
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=55.60 E-value=36 Score=32.65 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=18.0
Q ss_pred ccchHHHHHHHhcCCCeeecCCc
Q 009215 470 HERAHQWRRQLGRAGFQLVGLKS 492 (540)
Q Consensus 470 hE~~~~Wr~rm~rAGF~~vpls~ 492 (540)
.-..+.|+..|+.+||+.+.+..
T Consensus 233 ~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 233 PVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCHHHHHHHHHHcCCeEEEeeE
Confidence 44577899999999999876543
No 119
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=55.03 E-value=1.2e+02 Score=27.49 Aligned_cols=107 Identities=14% Similarity=0.154 Sum_probs=58.7
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
..+++.+.-...-.|+|+|.|.|. +...||.+ + -++|||+.+.. ..+...+.++.+|++=..+++
T Consensus 45 ~~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s~~------~~~~a~~~~~~~g~~~~v~~~ 109 (204)
T 3njr_A 45 ALTLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPRAD------RIENIQKNIDTYGLSPRMRAV 109 (204)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESCHH------HHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCCHH------HHHHHHHHHHHcCCCCCEEEE
Confidence 345666655555679999999983 44556665 2 48999998642 233344556677765223333
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
...+.. .+. ....-++++++..+ ..+ +|+.+ +.|+|.-.+++
T Consensus 110 ~~d~~~-~~~----~~~~~D~v~~~~~~-----------~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 110 QGTAPA-ALA----DLPLPEAVFIGGGG-----------SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp ESCTTG-GGT----TSCCCSEEEECSCC-----------CHH-HHHHHHHHSCTTCEEEE
T ss_pred eCchhh-hcc----cCCCCCEEEECCcc-----------cHH-HHHHHHHhcCCCcEEEE
Confidence 321110 011 11123455554422 234 66665 66899776665
No 120
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=54.59 E-value=1.1e+02 Score=27.72 Aligned_cols=99 Identities=13% Similarity=0.151 Sum_probs=52.5
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLT 354 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~ 354 (540)
..-.|+|+|.|.|.- ...|+.+ ++ ++|||+.+... .+.|++..-++.| +...+.
T Consensus 40 ~~~~vLdiG~G~G~~----~~~l~~~--~~---~v~~~D~s~~~----------~~~a~~~~~~~~~--~~~d~~----- 93 (239)
T 3bxo_A 40 EASSLLDVACGTGTH----LEHFTKE--FG---DTAGLELSEDM----------LTHARKRLPDATL--HQGDMR----- 93 (239)
T ss_dssp TCCEEEEETCTTSHH----HHHHHHH--HS---EEEEEESCHHH----------HHHHHHHCTTCEE--EECCTT-----
T ss_pred CCCeEEEecccCCHH----HHHHHHh--CC---cEEEEeCCHHH----------HHHHHHhCCCCEE--EECCHH-----
Confidence 446899999999943 3344443 22 89999976421 1112211112333 221111
Q ss_pred ccccCccCCce-EEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 355 RENLDLREGEA-LFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 355 ~~~L~i~~~Ea-LaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
.+.. ++.. +|+++.-.+||+.+. .....+|+.+ +.|+|.-.++++
T Consensus 94 --~~~~-~~~~D~v~~~~~~~~~~~~~--~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 94 --DFRL-GRKFSAVVSMFSSVGYLKTT--EELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp --TCCC-SSCEEEEEECTTGGGGCCSH--HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred --Hccc-CCCCcEEEEcCchHhhcCCH--HHHHHHHHHHHHhcCCCeEEEEE
Confidence 1112 2222 333333377888542 3456667665 778999888775
No 121
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=54.28 E-value=89 Score=27.95 Aligned_cols=106 Identities=9% Similarity=0.003 Sum_probs=56.1
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.+++.+.-...-+|+|+|.|.|..= ..|+.+ + -++|||+.+.. ..+...+.++..+++ ..+++.
T Consensus 68 ~~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~-~----~~v~~vD~~~~------~~~~a~~~~~~~~~~-~v~~~~ 131 (210)
T 3lbf_A 68 RMTELLELTPQSRVLEIGTGSGYQT----AILAHL-V----QHVCSVERIKG------LQWQARRRLKNLDLH-NVSTRH 131 (210)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHH-S----SEEEEEESCHH------HHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh-C----CEEEEEecCHH------HHHHHHHHHHHcCCC-ceEEEE
Confidence 3455555455668999999998533 334443 2 48999998642 233344455666654 233333
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
.... .... .-.+=+.|+++ ..+|++.+ ...+.|+|.-.+++.
T Consensus 132 ~d~~--~~~~---~~~~~D~i~~~--~~~~~~~~----------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 132 GDGW--QGWQ---ARAPFDAIIVT--AAPPEIPT----------ALMTQLDEGGILVLP 173 (210)
T ss_dssp SCGG--GCCG---GGCCEEEEEES--SBCSSCCT----------HHHHTEEEEEEEEEE
T ss_pred CCcc--cCCc---cCCCccEEEEc--cchhhhhH----------HHHHhcccCcEEEEE
Confidence 2111 0000 00112444444 45577754 256788997665543
No 122
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=53.93 E-value=63 Score=28.37 Aligned_cols=51 Identities=18% Similarity=0.170 Sum_probs=32.3
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEE
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFS 342 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~ 342 (540)
-+|+|+|.|.|. +...||.+ .-++|||+.+.. ..+...+.++..++ +++|.
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-----~~~v~~vD~s~~------~l~~a~~~~~~~~~~~v~~~ 75 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-----SKKVYAFDVQEQ------ALGKTSQRLSDLGIENTELI 75 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-----SSEEEEEESCHH------HHHHHHHHHHHHTCCCEEEE
T ss_pred CEEEEEcCCCCH----HHHHHHHh-----CCEEEEEECCHH------HHHHHHHHHHHcCCCcEEEE
Confidence 369999999984 44556766 348999998642 23334455556665 34443
No 123
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=53.16 E-value=16 Score=33.96 Aligned_cols=105 Identities=13% Similarity=0.137 Sum_probs=52.0
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+.+... .+...+.+. .-++.|.... +. .+..
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s~~~------~~~a~~~~~--~~~~~~~~~d--~~--~~~~ 115 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVSKSA------LEIAAKENT--AANISYRLLD--GL--VPEQ 115 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS---CEEEEESCHHH------HHHHHHHSC--CTTEEEEECC--TT--CHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECCHHH------HHHHHHhCc--ccCceEEECc--cc--cccc
Confidence 3469999999883 44555543 22 89999986421 111111111 1233333221 11 1111
Q ss_pred cccCccCCc-eEEEEeccccccccccccchHHHHHHHH-HhcCCcEE-EEEee
Q 009215 356 ENLDLREGE-ALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLL-TVVEQ 405 (540)
Q Consensus 356 ~~L~i~~~E-aLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvv-vlvEq 405 (540)
. ..+..+. .-+|-+...+||+..+ ....+|+.+ +.|+|.-. ++++.
T Consensus 116 ~-~~~~~~~~~d~v~~~~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 116 A-AQIHSEIGDANIYMRTGFHHIPVE---KRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp H-HHHHHHHCSCEEEEESSSTTSCGG---GHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred c-cccccccCccEEEEcchhhcCCHH---HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 0 0011001 2345566677887543 455666655 77899765 55554
No 124
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=52.50 E-value=24 Score=33.22 Aligned_cols=35 Identities=20% Similarity=0.013 Sum_probs=26.1
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..=+|+|+|.|.| .+...||.+. |..++|||+.+.
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~ 58 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVK 58 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCC
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCH
Confidence 3347999999998 4566677542 568999999874
No 125
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=50.49 E-value=1e+02 Score=27.96 Aligned_cols=106 Identities=15% Similarity=0.114 Sum_probs=56.2
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC---ceeEEEeeccCCCCCC
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI---NLEFSMISEPVTPSLL 353 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl---~~eF~~v~~~~~~~~l 353 (540)
-.|+|+|.|.|. +...++.+. . -++|||+.+.. ..+...+.++..++ +++|..-. +. .+
T Consensus 55 ~~vLDlGcGtG~----~~~~~~~~~--~--~~v~gvD~s~~------~l~~a~~~~~~~~~~~~~v~~~~~d--~~--~~ 116 (201)
T 2ift_A 55 SECLDGFAGSGS----LGFEALSRQ--A--KKVTFLELDKT------VANQLKKNLQTLKCSSEQAEVINQS--SL--DF 116 (201)
T ss_dssp CEEEETTCTTCH----HHHHHHHTT--C--SEEEEECSCHH------HHHHHHHHHHHTTCCTTTEEEECSC--HH--HH
T ss_pred CeEEEcCCccCH----HHHHHHHcc--C--CEEEEEECCHH------HHHHHHHHHHHhCCCccceEEEECC--HH--HH
Confidence 479999999984 222233332 1 38999998642 22334445555665 34433221 10 00
Q ss_pred cccccCccC-CceEEEEeccccccccccccchHHHHHHHHHh---cCCcEEEEEeecCCC
Q 009215 354 TRENLDLRE-GEALFVNSIMHLHKYVKESRGSLKAILQAIKR---LNPTLLTVVEQDANH 409 (540)
Q Consensus 354 ~~~~L~i~~-~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~---L~PkvvvlvEqea~h 409 (540)
.. .+.-.. =++|+.|..+ | .+..+.+|+.+.+ |+|.-+++++.....
T Consensus 117 ~~-~~~~~~~fD~I~~~~~~--~------~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 117 LK-QPQNQPHFDVVFLDPPF--H------FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TT-SCCSSCCEEEEEECCCS--S------SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred HH-hhccCCCCCEEEECCCC--C------CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 00 000112 2456666553 2 1346678888865 999988877655443
No 126
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=49.48 E-value=16 Score=35.68 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=23.7
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.-.|+|+|.+.| .+...|+.+-+ ..+||||+.+.
T Consensus 47 ~~~VLDiGCG~G----~~~~~la~~~~---~~~v~gvDis~ 80 (292)
T 3g07_A 47 GRDVLDLGCNVG----HLTLSIACKWG---PSRMVGLDIDS 80 (292)
T ss_dssp TSEEEEESCTTC----HHHHHHHHHTC---CSEEEEEESCH
T ss_pred CCcEEEeCCCCC----HHHHHHHHHcC---CCEEEEECCCH
Confidence 457999999999 34445555422 24999999864
No 127
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=48.82 E-value=58 Score=31.75 Aligned_cols=113 Identities=12% Similarity=0.083 Sum_probs=58.9
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-.|+|+|.|.|. +.-.|+.+ |..++|||+.+.. ..+...+.++..|+.-..+++...+.. .+. .
T Consensus 125 ~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDis~~------al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~ 188 (284)
T 1nv8_A 125 KTVADIGTGSGA----IGVSVAKF----SDAIVFATDVSSK------AVEIARKNAERHGVSDRFFVRKGEFLE-PFK-E 188 (284)
T ss_dssp CEEEEESCTTSH----HHHHHHHH----SSCEEEEEESCHH------HHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-G
T ss_pred CEEEEEeCchhH----HHHHHHHC----CCCEEEEEECCHH------HHHHHHHHHHHcCCCCceEEEECcchh-hcc-c
Confidence 479999999994 44455554 4579999998643 233344456666764223344322110 111 1
Q ss_pred ccCccCCceEEEEeccccc--cccc----c-------ccchHHHHHHHH-HhcCCcEEEEEeecC
Q 009215 357 NLDLREGEALFVNSIMHLH--KYVK----E-------SRGSLKAILQAI-KRLNPTLLTVVEQDA 407 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH--~L~~----e-------s~~~r~~~L~~I-r~L~PkvvvlvEqea 407 (540)
...+-+.|+.|-.+.-. ++.. + ..+.++.+-+.+ +.++|.-.+++|-..
T Consensus 189 --~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 189 --KFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp --GTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred --ccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 11111677777443211 0100 1 012234444456 788999888887543
No 128
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=48.58 E-value=44 Score=30.00 Aligned_cols=101 Identities=13% Similarity=0.058 Sum_probs=50.9
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeec
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISE 346 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~ 346 (540)
+++.+.. ..-.|+|+|.|.|. +...| + .-++|||+.+... .+.|++..-++.| +..
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l-----~--~~~v~~vD~s~~~----------~~~a~~~~~~~~~--~~~ 84 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL-----P--YPQKVGVEPSEAM----------LAVGRRRAPEATW--VRA 84 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC-----C--CSEEEEECCCHHH----------HHHHHHHCTTSEE--ECC
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC-----C--CCeEEEEeCCHHH----------HHHHHHhCCCcEE--EEc
Confidence 4444433 45589999999984 33344 1 1289999976421 1122221122232 221
Q ss_pred cCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEE
Q 009215 347 PVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVV 403 (540)
Q Consensus 347 ~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~Pkvvvlv 403 (540)
.+ ..+...++..=+|-+...|||+.+ + ..+|+. .+.|+|.-.+++
T Consensus 85 d~-------~~~~~~~~~fD~v~~~~~l~~~~~----~-~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 85 WG-------EALPFPGESFDVVLLFTTLEFVED----V-ERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp CT-------TSCCSCSSCEEEEEEESCTTTCSC----H-HHHHHHHHHHEEEEEEEEE
T ss_pred cc-------ccCCCCCCcEEEEEEcChhhhcCC----H-HHHHHHHHHHcCCCCEEEE
Confidence 11 112222332333445567788743 3 455554 577899866644
No 129
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=47.40 E-value=50 Score=29.65 Aligned_cols=63 Identities=14% Similarity=0.102 Sum_probs=37.9
Q ss_pred hhhHHHHhhhc--CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc
Q 009215 262 AANEAIRQAAQ--GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN 338 (540)
Q Consensus 262 tANqAILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~ 338 (540)
...+.+++.+. -...-.|+|+|.|.|. +...|+.+ +..++|||+.+.. ..+...+.++..++.
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~s~~------~~~~a~~~~~~~~~~ 109 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDISDE------SMTAAEENAALNGIY 109 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEESCHH------HHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEECCHH------HHHHHHHHHHHcCCC
Confidence 34455555554 2345689999999983 34446655 2358999998642 223344455556654
No 130
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=47.12 E-value=64 Score=29.30 Aligned_cols=113 Identities=17% Similarity=0.210 Sum_probs=57.1
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEEEeeccCCCCCCc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFSMISEPVTPSLLT 354 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~~v~~~~~~~~l~ 354 (540)
.-.|+|+|.|.|. +...||.+- |..++|||+.+.. ..+...+.++..++ ++.| +...+. .+.
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s~~------~l~~a~~~~~~~~~~~v~~--~~~d~~--~~~ 104 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDIQKS------VLSYALDKVLEVGVPNIKL--LWVDGS--DLT 104 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEESCHH------HHHHHHHHHHHHCCSSEEE--EECCSS--CGG
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEcCHH------HHHHHHHHHHHcCCCCEEE--EeCCHH--HHH
Confidence 3469999999994 444455442 4569999998643 22334445555565 3443 332111 111
Q ss_pred ccccCccCCceEEEEeccccccccccc-cchHHHHHHHH-HhcCCcEEEEEeec
Q 009215 355 RENLDLREGEALFVNSIMHLHKYVKES-RGSLKAILQAI-KRLNPTLLTVVEQD 406 (540)
Q Consensus 355 ~~~L~i~~~EaLaVN~~~~LH~L~~es-~~~r~~~L~~I-r~L~PkvvvlvEqe 406 (540)
+.+.-..=+.|++|..........+. ......+|+.+ +.|+|.-+++++.+
T Consensus 105 -~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 105 -DYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp -GTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred -hhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 00111122567777442110000000 01125677776 55999988877543
No 131
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=46.98 E-value=92 Score=32.14 Aligned_cols=100 Identities=15% Similarity=0.197 Sum_probs=52.6
Q ss_pred EEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcccc
Q 009215 278 HIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTREN 357 (540)
Q Consensus 278 HIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~~ 357 (540)
+|+|+|.|.| ++-.+|.|.|. -|++||+.+. . .+...+.++..|+.=...++...++ ++
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aGA---~~V~ave~s~-~------~~~a~~~~~~n~~~~~i~~i~~~~~--~~---- 144 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAGA---RRVYAVEASA-I------WQQAREVVRFNGLEDRVHVLPGPVE--TV---- 144 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTTC---SEEEEEECST-T------HHHHHHHHHHTTCTTTEEEEESCTT--TC----
T ss_pred EEEEeCCCcc-----HHHHHHHHhCC---CEEEEEeChH-H------HHHHHHHHHHcCCCceEEEEeeeee--ee----
Confidence 5899999888 33334555443 2789999753 1 1122233445555434445543222 12
Q ss_pred cCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEE
Q 009215 358 LDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTV 402 (540)
Q Consensus 358 L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvl 402 (540)
.+. ..+=+|-|..--+-|..+ +.++.+|... |-|+|.-+++
T Consensus 145 -~lp-e~~DvivsE~~~~~l~~e--~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 145 -ELP-EQVDAIVSEWMGYGLLHE--SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp -CCS-SCEEEEECCCCBTTBTTT--CSHHHHHHHHHHHEEEEEEEE
T ss_pred -cCC-ccccEEEeeccccccccc--chhhhHHHHHHhhCCCCceEC
Confidence 121 112222232222444444 5688888877 6788887665
No 132
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=46.97 E-value=1.4e+02 Score=30.97 Aligned_cols=95 Identities=14% Similarity=0.152 Sum_probs=56.2
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-.|+|+|.|.|. +...||.+ + -+++||+.+.. ..+...+.++..|+. .+++...+. .+...
T Consensus 292 ~~VLDlgcG~G~----~sl~la~~--~---~~V~gvD~s~~------ai~~A~~n~~~ngl~--v~~~~~d~~--~~~~~ 352 (425)
T 2jjq_A 292 EKILDMYSGVGT----FGIYLAKR--G---FNVKGFDSNEF------AIEMARRNVEINNVD--AEFEVASDR--EVSVK 352 (425)
T ss_dssp SEEEEETCTTTH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHHHHHTCC--EEEEECCTT--TCCCT
T ss_pred CEEEEeeccchH----HHHHHHHc--C---CEEEEEECCHH------HHHHHHHHHHHcCCc--EEEEECChH--HcCcc
Confidence 378999999984 44455654 2 28999998643 223334455556666 444442221 11111
Q ss_pred ccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 357 NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
.-++|++|-.. .+..+.+++.++.|+|.-++.+.
T Consensus 353 -----~fD~Vv~dPPr---------~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 -----GFDTVIVDPPR---------AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp -----TCSEEEECCCT---------TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred -----CCCEEEEcCCc---------cchHHHHHHHHHhcCCCcEEEEE
Confidence 23566665432 12345789999999999888774
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=46.96 E-value=1.3e+02 Score=26.94 Aligned_cols=45 Identities=4% Similarity=0.011 Sum_probs=29.4
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.+++.+.-...-.|+|+|.|.|..-..|.+.. .|.-++|+|+.+.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~~~~~v~~vD~~~ 112 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV------GEDGLVVSIERIP 112 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEEESCH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh------CCCCEEEEEeCCH
Confidence 44455544445689999999886554444443 2345899999864
No 134
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=46.15 E-value=1.2e+02 Score=28.42 Aligned_cols=112 Identities=12% Similarity=0.078 Sum_probs=57.7
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-.|+|+|.|.|. +...||.+. +. +||||+.+... .+...+.++..++.=..+++...+. .+.
T Consensus 50 ~~~vLDlG~G~G~----~~~~la~~~---~~-~v~gvDi~~~~------~~~a~~n~~~~~~~~~v~~~~~D~~--~~~- 112 (259)
T 3lpm_A 50 KGKIIDLCSGNGI----IPLLLSTRT---KA-KIVGVEIQERL------ADMAKRSVAYNQLEDQIEIIEYDLK--KIT- 112 (259)
T ss_dssp CCEEEETTCTTTH----HHHHHHTTC---CC-EEEEECCSHHH------HHHHHHHHHHTTCTTTEEEECSCGG--GGG-
T ss_pred CCEEEEcCCchhH----HHHHHHHhc---CC-cEEEEECCHHH------HHHHHHHHHHCCCcccEEEEECcHH--Hhh-
Confidence 4579999999993 555677773 23 99999986421 2233444555555422333332111 111
Q ss_pred cccCccCCceEEEEeccccc---ccccc----------ccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIMHLH---KYVKE----------SRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH---~L~~e----------s~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
..+.-..=+.|+.|-.+.-. .+... .....+.+++.+ +-|+|.-.+++.
T Consensus 113 ~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 113 DLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 00111223677777665322 22111 012356677765 668998777663
No 135
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=45.61 E-value=1.3e+02 Score=29.50 Aligned_cols=110 Identities=8% Similarity=0.071 Sum_probs=58.1
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEE
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFS 342 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~ 342 (540)
-..+++.+.-...-+|+|+|.|.|. +...|+.+ +++.-++|||+.+... .+...+.++..|++ +.|.
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s~~~------~~~a~~~~~~~g~~~v~~~ 131 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYSRKI------CEIAKRNVERLGIENVIFV 131 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESCHHH------HHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECCHHH------HHHHHHHHHHcCCCCeEEE
Confidence 3456666654555689999999884 44444443 2234689999986421 22334455556653 4443
Q ss_pred EeeccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 343 MISEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 343 ~v~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
... .. .... ...+=++|+++ ..+||+.+ ...+.|+|.-.+++.
T Consensus 132 ~~d--~~--~~~~---~~~~fD~Iv~~--~~~~~~~~----------~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 132 CGD--GY--YGVP---EFSPYDVIFVT--VGVDEVPE----------TWFTQLKEGGRVIVP 174 (317)
T ss_dssp ESC--GG--GCCG---GGCCEEEEEEC--SBBSCCCH----------HHHHHEEEEEEEEEE
T ss_pred ECC--hh--hccc---cCCCeEEEEEc--CCHHHHHH----------HHHHhcCCCcEEEEE
Confidence 221 11 1000 00112444444 44566642 245688998777664
No 136
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=44.02 E-value=33 Score=32.09 Aligned_cols=113 Identities=12% Similarity=0.122 Sum_probs=58.5
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEEEeeccCCCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFSMISEPVTPSLL 353 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~~v~~~~~~~~l 353 (540)
+.-.|+|+|.|.|. +...||.+. |..+++||+.+.. .+....+.++..++ ++.| +...+ ..+
T Consensus 34 ~~~~vLDiGcG~G~----~~~~lA~~~---p~~~v~giD~s~~------~l~~a~~~~~~~~l~nv~~--~~~Da--~~~ 96 (218)
T 3dxy_A 34 EAPVTLEIGFGMGA----SLVAMAKDR---PEQDFLGIEVHSP------GVGACLASAHEEGLSNLRV--MCHDA--VEV 96 (218)
T ss_dssp CCCEEEEESCTTCH----HHHHHHHHC---TTSEEEEECSCHH------HHHHHHHHHHHTTCSSEEE--ECSCH--HHH
T ss_pred CCCeEEEEeeeChH----HHHHHHHHC---CCCeEEEEEecHH------HHHHHHHHHHHhCCCcEEE--EECCH--HHH
Confidence 44579999999994 344445432 4568999998643 23344455666665 3443 32111 000
Q ss_pred cccccCccCC--ceEEEEeccccccccccc-cchHHHHHHHH-HhcCCcEEEEEeec
Q 009215 354 TRENLDLREG--EALFVNSIMHLHKYVKES-RGSLKAILQAI-KRLNPTLLTVVEQD 406 (540)
Q Consensus 354 ~~~~L~i~~~--EaLaVN~~~~LH~L~~es-~~~r~~~L~~I-r~L~PkvvvlvEqe 406 (540)
-... +.++ +.|++|+..-.++..... +-....+|+.+ +.|+|.-++++.-+
T Consensus 97 l~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 97 LHKM--IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHHH--SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHH--cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 0000 1223 455565443333221110 00113578777 55999998877543
No 137
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=43.96 E-value=20 Score=32.07 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=28.4
Q ss_pred HHhhhcC-CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 267 IRQAAQG-KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 267 ILEA~~g-~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
+++.+.. .+.-+|+|+|.|.|. +...|+.+. |..++|||+.+..
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~~~~ 65 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDLSMD 65 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEECC--
T ss_pred HHHHhhhcCCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEECCHH
Confidence 3444443 566799999999995 333444431 4679999998754
No 138
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=43.59 E-value=1.1e+02 Score=29.21 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=56.4
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLT 354 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~ 354 (540)
...+|+|+|.|.|. +...|+.+- |..++|||+.+... .+...+.++..+++ ..+++...+. +
T Consensus 109 ~~~~vLDlG~GsG~----~~~~la~~~---~~~~v~~vD~s~~~------l~~a~~n~~~~~~~-~v~~~~~d~~----~ 170 (276)
T 2b3t_A 109 QPCRILDLGTGTGA----IALALASER---PDCEIIAVDRMPDA------VSLAQRNAQHLAIK-NIHILQSDWF----S 170 (276)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHHC---TTSEEEEECSSHHH------HHHHHHHHHHHTCC-SEEEECCSTT----G
T ss_pred CCCEEEEecCCccH----HHHHHHHhC---CCCEEEEEECCHHH------HHHHHHHHHHcCCC-ceEEEEcchh----h
Confidence 44589999999995 333444321 34689999976422 23334445555654 2333332111 1
Q ss_pred ccccCccCCceEEEEecccc-----------ccccccc-------cchHHHHHHHH-HhcCCcEEEEEe
Q 009215 355 RENLDLREGEALFVNSIMHL-----------HKYVKES-------RGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 355 ~~~L~i~~~EaLaVN~~~~L-----------H~L~~es-------~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
.+.-..=+.|+.|-.+.- +|-+... ......+++.+ +.|+|.-.++++
T Consensus 171 --~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 171 --ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp --GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred --hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 011112256776654421 1111000 02345666655 568999888876
No 139
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=43.44 E-value=88 Score=33.02 Aligned_cols=121 Identities=10% Similarity=0.032 Sum_probs=64.7
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHH-HhHHHHHHHHHhcCCc-eeEE
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELK-ASMKPVLHDATSLGIN-LEFS 342 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~-~~~~~L~~~a~~fgl~-~eF~ 342 (540)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. +..+++||+.+....+.. ...+.+.+.++.+|+. -.++
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-------g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~ 304 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-------GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVE 304 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-------CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-------CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceE
Confidence 456666654555679999999996544433322 234899999875432222 2234456677777843 1233
Q ss_pred Eeec-cCCCCCCccccc--CccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEE
Q 009215 343 MISE-PVTPSLLTRENL--DLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVV 403 (540)
Q Consensus 343 ~v~~-~~~~~~l~~~~L--~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~Pkvvvlv 403 (540)
++.. ... ....+ ...+=++|++|..+ + . +.....+-...+.|+|.-.+++
T Consensus 305 ~i~gD~~~----~~~~~~~~~~~FDvIvvn~~l--~--~---~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 305 FSLKKSFV----DNNRVAELIPQCDVILVNNFL--F--D---EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp EEESSCST----TCHHHHHHGGGCSEEEECCTT--C--C---HHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEEcCccc----cccccccccCCCCEEEEeCcc--c--c---ccHHHHHHHHHHhCCCCeEEEE
Confidence 3321 110 00001 01234677776544 1 1 1223334455688999877766
No 140
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=42.71 E-value=1.2e+02 Score=30.75 Aligned_cols=108 Identities=13% Similarity=0.085 Sum_probs=57.0
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC--ceeEEEeeccCCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI--NLEFSMISEPVTPSL 352 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl--~~eF~~v~~~~~~~~ 352 (540)
..-.|+|+|.|.|. +.-.+|.+. +.-+|+|++.+.. ..+...+.++..|+ .+.|.... + ..
T Consensus 217 ~~~~vLD~gCGsG~----~~i~~a~~~---~~~~v~g~Dis~~------~l~~A~~n~~~~gl~~~i~~~~~D--~--~~ 279 (373)
T 3tm4_A 217 DGGSVLDPMCGSGT----ILIELALRR---YSGEIIGIEKYRK------HLIGAEMNALAAGVLDKIKFIQGD--A--TQ 279 (373)
T ss_dssp CSCCEEETTCTTCH----HHHHHHHTT---CCSCEEEEESCHH------HHHHHHHHHHHTTCGGGCEEEECC--G--GG
T ss_pred CCCEEEEccCcCcH----HHHHHHHhC---CCCeEEEEeCCHH------HHHHHHHHHHHcCCCCceEEEECC--h--hh
Confidence 34579999999993 444455442 1237999998642 23334455666676 45554322 1 11
Q ss_pred CcccccCccCCceEEEEecccccccccc-c-cchHHHHHHHHHh-cCCcEEEEE
Q 009215 353 LTRENLDLREGEALFVNSIMHLHKYVKE-S-RGSLKAILQAIKR-LNPTLLTVV 403 (540)
Q Consensus 353 l~~~~L~i~~~EaLaVN~~~~LH~L~~e-s-~~~r~~~L~~Ir~-L~Pkvvvlv 403 (540)
+. +....-++|+.|-++... +... . ..-...+++.+++ |++.+++++
T Consensus 280 ~~---~~~~~fD~Ii~npPyg~r-~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 280 LS---QYVDSVDFAISNLPYGLK-IGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GG---GTCSCEEEEEEECCCC-------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CC---cccCCcCEEEECCCCCcc-cCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 11 111223678888777542 2111 0 1123667777766 766766665
No 141
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=41.71 E-value=40 Score=32.24 Aligned_cols=51 Identities=20% Similarity=0.311 Sum_probs=32.4
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN 338 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~ 338 (540)
..-+|+|+|.|.|.--..|-+. + |..+||||+.+.. ..+.+.+.++.+|+.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s~~------~~~~a~~~~~~~~l~ 130 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDATRK------KVAFVERAIEVLGLK 130 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESCHH------HHHHHHHHHHHHTCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECCHH------HHHHHHHHHHHhCCC
Confidence 4458999999999754443332 1 4579999998643 233344556666763
No 142
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=39.85 E-value=1.1e+02 Score=28.10 Aligned_cols=31 Identities=6% Similarity=0.060 Sum_probs=23.9
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
-+|+|+|.|.|. +...|+.+ | .++|||+.+.
T Consensus 50 ~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s~ 80 (226)
T 3m33_A 50 TRVLEAGCGHGP----DAARFGPQ--A---ARWAAYDFSP 80 (226)
T ss_dssp CEEEEESCTTSH----HHHHHGGG--S---SEEEEEESCH
T ss_pred CeEEEeCCCCCH----HHHHHHHc--C---CEEEEEECCH
Confidence 579999999995 56667766 2 3899999864
No 143
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=38.81 E-value=1e+02 Score=28.41 Aligned_cols=36 Identities=17% Similarity=0.036 Sum_probs=23.7
Q ss_pred CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 273 GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 273 g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
..+.-.|+|+|.|.|.-= ..|+.+ |+ .++|||+.+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~----~~l~~~--~~--~~v~gvD~s~ 89 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQ----LLSACE--SF--TEIIVSDYTD 89 (265)
T ss_dssp SCCEEEEEEESCTTCCGG----GTTGGG--TE--EEEEEEESCH
T ss_pred ccCCCEEEEECCCccHHH----HHHhhc--cc--CeEEEecCCH
Confidence 345678999999998432 223332 22 6899999864
No 144
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=38.55 E-value=85 Score=27.07 Aligned_cols=56 Identities=18% Similarity=0.167 Sum_probs=33.5
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI 337 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl 337 (540)
+++.+.-...-+|+|+|.|.|. +...|+.+. .++|||+.+.. ..+...+.++..++
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~~~------~~~~a~~~~~~~~~ 80 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRNPE------AISTTEMNLQRHGL 80 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESCHH------HHHHHHHHHHHTTC
T ss_pred HHHhcCCCCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECCHH------HHHHHHHHHHHcCC
Confidence 3344443444589999999983 444555543 58999998642 22334445555665
No 145
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=38.38 E-value=1.3e+02 Score=29.19 Aligned_cols=87 Identities=8% Similarity=0.048 Sum_probs=46.7
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEe
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMI 344 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v 344 (540)
+.|++++.-...-+|+|+|.|.|.--..|.+ + +. ++|||+.+.. ..+.+.+.++..++.-.++++
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~----~--~~---~v~~vD~~~~------~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLE----K--AK---KVVACELDPR------LVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHH----H--SS---EEEEEESCHH------HHHHHHHHHTTSTTGGGEEEE
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHh----h--CC---EEEEEECCHH------HHHHHHHHHHhcCCCCceEEE
Confidence 4455555544456899999999975554443 3 21 8999998642 123344445444542234444
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccc
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMH 373 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~ 373 (540)
...+. .+. +..-+.|+.|..+.
T Consensus 83 ~~D~~--~~~-----~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 83 VGDVL--KTD-----LPFFDTCVANLPYQ 104 (285)
T ss_dssp ESCTT--TSC-----CCCCSEEEEECCGG
T ss_pred Eccee--ccc-----chhhcEEEEecCcc
Confidence 32221 111 11224777777654
No 146
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=36.81 E-value=2.2e+02 Score=28.46 Aligned_cols=98 Identities=10% Similarity=0.161 Sum_probs=51.6
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
-=+|+|+|.|.|. ..+++ ||..++ -++|||+.+... .+.-.+.+++.|+ -..+++.... ..+
T Consensus 123 g~rVLDIGcG~G~-~ta~~--lA~~~g----a~V~gIDis~~~------l~~Ar~~~~~~gl-~~v~~v~gDa--~~l-- 184 (298)
T 3fpf_A 123 GERAVFIGGGPLP-LTGIL--LSHVYG----MRVNVVEIEPDI------AELSRKVIEGLGV-DGVNVITGDE--TVI-- 184 (298)
T ss_dssp TCEEEEECCCSSC-HHHHH--HHHTTC----CEEEEEESSHHH------HHHHHHHHHHHTC-CSEEEEESCG--GGG--
T ss_pred cCEEEEECCCccH-HHHHH--HHHccC----CEEEEEECCHHH------HHHHHHHHHhcCC-CCeEEEECch--hhC--
Confidence 3478999988762 33333 354443 489999986431 2223344555665 2344443211 111
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
.-.+=++|+++.. . + ....+|+. .|.|+|.-.+++.
T Consensus 185 ---~d~~FDvV~~~a~------~---~-d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 185 ---DGLEFDVLMVAAL------A---E-PKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp ---GGCCCSEEEECTT------C---S-CHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---CCCCcCEEEECCC------c---c-CHHHHHHHHHHHcCCCcEEEEE
Confidence 1112255655332 1 2 34455555 5779998887764
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=36.68 E-value=81 Score=30.90 Aligned_cols=57 Identities=18% Similarity=0.200 Sum_probs=38.0
Q ss_pred hcCCcchhhh-Hhhh----HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 251 QTTPYISFGF-MAAN----EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 251 e~sP~~kfah-ftAN----qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
...|=-++++ |..| +.|++++.-... +|+|+|.|.| .|-..|+.+. -++|||+.+..
T Consensus 18 ~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G----~lt~~L~~~~-----~~V~avEid~~ 79 (271)
T 3fut_A 18 GLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLG----ALTRALLEAG-----AEVTAIEKDLR 79 (271)
T ss_dssp TCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTS----HHHHHHHHTT-----CCEEEEESCGG
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchH----HHHHHHHHcC-----CEEEEEECCHH
Confidence 3445455554 3333 345566655556 9999999999 5777788763 27999998754
No 148
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=36.64 E-value=3.3e+02 Score=27.94 Aligned_cols=43 Identities=16% Similarity=0.211 Sum_probs=30.8
Q ss_pred CeeEEEEccCCCCC----chHHHHHHHhcCC----CCCCeEEEeEecCCCC
Q 009215 275 DSLHIIDLGMERTL----QWPSLIRSLASRP----EGPPRIRITCLISNQN 317 (540)
Q Consensus 275 ~~VHIIDfgI~~G~----QWpsLiqaLA~Rp----~GPP~LRITgI~~~~~ 317 (540)
+.+.|.|||.+.|- -+..+|+++..+. ..||.++|..-+.|.+
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~N 102 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSN 102 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTS
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCcc
Confidence 36999999999993 4445566555432 2368999999998864
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=36.33 E-value=51 Score=29.47 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=52.1
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEEEeeccCCCCCCcc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFSMISEPVTPSLLTR 355 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~~v~~~~~~~~l~~ 355 (540)
-+|+|+|.|.|.--..|.+.+ |..++|||+.+.. ..+...+.++..+++ +.| +...+. .+..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s~~------~~~~a~~~~~~~~~~~v~~--~~~d~~--~~~~ 129 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSLGK------RVRFLRQVQHELKLENIEP--VQSRVE--EFPS 129 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESCHH------HHHHHHHHHHHTTCSSEEE--EECCTT--TSCC
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCCHH------HHHHHHHHHHHcCCCCeEE--Eecchh--hCCc
Confidence 489999999997555444432 3458999998642 223344455566654 444 332111 1110
Q ss_pred cccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
...-+.|+.|. + .....+|+.+ +.|+|.-.++++
T Consensus 130 ----~~~~D~i~~~~---~--------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 130 ----EPPFDGVISRA---F--------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ----CSCEEEEECSC---S--------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ----cCCcCEEEEec---c--------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 01113333321 1 2345667666 568998887776
No 150
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=36.05 E-value=1.2e+02 Score=30.16 Aligned_cols=114 Identities=15% Similarity=0.100 Sum_probs=56.8
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeec
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISE 346 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~ 346 (540)
++....-...-.|+|.|.|.|. +.-.+|.+- .|..+|+|++.+.. ..+...+.++..|+. ..+++..
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~--~~~~~v~g~Di~~~------~i~~a~~n~~~~g~~-~i~~~~~ 261 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL--GPTSPVYAGDLDEK------RLGLAREAALASGLS-WIRFLRA 261 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH--CTTSCEEEEESCHH------HHHHHHHHHHHTTCT-TCEEEEC
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh--CCCceEEEEECCHH------HHHHHHHHHHHcCCC-ceEEEeC
Confidence 3444433344579999999994 333333321 14568999998642 233344556667775 3334332
Q ss_pred cCCCCCCcccccCccCCceEEEEeccccccccccc-cchHHHHHHHH-HhcCCc
Q 009215 347 PVTPSLLTRENLDLREGEALFVNSIMHLHKYVKES-RGSLKAILQAI-KRLNPT 398 (540)
Q Consensus 347 ~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es-~~~r~~~L~~I-r~L~Pk 398 (540)
.+. .+.. ....-++|+.|-++....-.... ..-...+++.+ +.|+|.
T Consensus 262 D~~--~~~~---~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkpg 310 (354)
T 3tma_A 262 DAR--HLPR---FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPG 310 (354)
T ss_dssp CGG--GGGG---TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTT
T ss_pred Chh--hCcc---ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCC
Confidence 111 1111 11122688888887542211110 11235667665 566784
No 151
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=35.93 E-value=72 Score=30.04 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=54.3
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeEEEeeccCCCCCCc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEFSMISEPVTPSLLT 354 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF~~v~~~~~~~~l~ 354 (540)
-.|+|+|.+.|.--. .||.+- ||..+||+|+.+.. ..+...+.++..|+. ++|..-... + .+
T Consensus 65 ~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s~~------~~~~a~~~~~~~g~~~~v~~~~~d~~-~--~l- 128 (248)
T 3tfw_A 65 KRILEIGTLGGYSTI----WMAREL--PADGQLLTLEADAH------HAQVARENLQLAGVDQRVTLREGPAL-Q--SL- 128 (248)
T ss_dssp SEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECCHH------HHHHHHHHHHHTTCTTTEEEEESCHH-H--HH-
T ss_pred CEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECCHH------HHHHHHHHHHHcCCCCcEEEEEcCHH-H--HH-
Confidence 479999999984333 444432 34579999998642 233344556666754 454432210 0 00
Q ss_pred ccccC-ccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 355 RENLD-LREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 355 ~~~L~-i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
..+. ...=+.|+++.. ......+|+. .+.|+|.-+++++
T Consensus 129 -~~~~~~~~fD~V~~d~~----------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 129 -ESLGECPAFDLIFIDAD----------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp -HTCCSCCCCSEEEECSC----------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred -HhcCCCCCeEEEEECCc----------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0010 112345555432 1223445554 5789999988885
No 152
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=35.78 E-value=50 Score=28.22 Aligned_cols=106 Identities=10% Similarity=0.083 Sum_probs=52.6
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-+|+|+|.|.|. +...|+.+ | +. +|||+.+... .+...+.++..++++ +++..... .. ..
T Consensus 43 ~~vLD~GcG~G~----~~~~l~~~--~-~~--v~~vD~~~~~------~~~a~~~~~~~~~~~--~~~~~d~~--~~-~~ 102 (171)
T 1ws6_A 43 GRFLDPFAGSGA----VGLEAASE--G-WE--AVLVEKDPEA------VRLLKENVRRTGLGA--RVVALPVE--VF-LP 102 (171)
T ss_dssp CEEEEETCSSCH----HHHHHHHT--T-CE--EEEECCCHHH------HHHHHHHHHHHTCCC--EEECSCHH--HH-HH
T ss_pred CeEEEeCCCcCH----HHHHHHHC--C-Ce--EEEEeCCHHH------HHHHHHHHHHcCCce--EEEeccHH--HH-HH
Confidence 479999999993 44555554 3 33 9999986421 222334444555533 33321110 00 00
Q ss_pred ccCc--cCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEeecCC
Q 009215 357 NLDL--REGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVEQDAN 408 (540)
Q Consensus 357 ~L~i--~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvEqea~ 408 (540)
.+.- ..=+.|+.|.++. ... ....+.+.+ .+.|+|.-+++++-...
T Consensus 103 ~~~~~~~~~D~i~~~~~~~-~~~----~~~~~~~~~-~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 103 EAKAQGERFTVAFMAPPYA-MDL----AALFGELLA-SGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHHHTTCCEEEEEECCCTT-SCT----THHHHHHHH-HTCEEEEEEEEEEEETT
T ss_pred hhhccCCceEEEEECCCCc-hhH----HHHHHHHHh-hcccCCCcEEEEEeCCc
Confidence 0000 0124666665554 111 222333333 36699998887765544
No 153
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=32.31 E-value=2.3e+02 Score=25.50 Aligned_cols=104 Identities=7% Similarity=0.005 Sum_probs=53.4
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEee
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMIS 345 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~ 345 (540)
.|++.+.-...-+|+|+|.|.|.-- ..|+.+. -++|||+.+.. ..+...+.+...+ ++.| +.
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~----~~l~~~~-----~~v~~vD~~~~------~~~~a~~~~~~~~-~v~~--~~ 122 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYT----ALIAEIV-----DKVVSVEINEK------MYNYASKLLSYYN-NIKL--IL 122 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHHS-----SEEEEEESCHH------HHHHHHHHHTTCS-SEEE--EE
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHH----HHHHHHc-----CEEEEEeCCHH------HHHHHHHHHhhcC-CeEE--EE
Confidence 4445554444558999999998533 3344331 38999998642 1223334445545 4443 32
Q ss_pred ccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 346 EPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 346 ~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
..... .+.. -.+=+.|+ +...+||+.+ ...+.|+|.-.+++.
T Consensus 123 ~d~~~-~~~~----~~~fD~v~--~~~~~~~~~~----------~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 123 GDGTL-GYEE----EKPYDRVV--VWATAPTLLC----------KPYEQLKEGGIMILP 164 (231)
T ss_dssp SCGGG-CCGG----GCCEEEEE--ESSBBSSCCH----------HHHHTEEEEEEEEEE
T ss_pred CCccc-cccc----CCCccEEE--ECCcHHHHHH----------HHHHHcCCCcEEEEE
Confidence 11110 0110 01113444 4445677753 256788998766553
No 154
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=29.80 E-value=56 Score=28.86 Aligned_cols=29 Identities=21% Similarity=0.279 Sum_probs=23.3
Q ss_pred EEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 278 HIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 278 HIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.|+|+|.|.| .+...|+.+. ++|||+.+.
T Consensus 26 ~vLD~GcG~G----~~~~~l~~~~------~v~gvD~s~ 54 (170)
T 3q87_B 26 IVLDLGTSTG----VITEQLRKRN------TVVSTDLNI 54 (170)
T ss_dssp EEEEETCTTC----HHHHHHTTTS------EEEEEESCH
T ss_pred eEEEeccCcc----HHHHHHHhcC------cEEEEECCH
Confidence 8999999999 4666677653 999999864
No 155
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=29.77 E-value=88 Score=29.64 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=30.2
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCce
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINL 339 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~ 339 (540)
-.|+|+|.|.|. +...++.+ |+ ++|||+.+... .+...+.++..++.+
T Consensus 122 ~~VLDiGcG~G~----l~~~la~~--g~---~v~gvDi~~~~------v~~a~~n~~~~~~~v 169 (254)
T 2nxc_A 122 DKVLDLGTGSGV----LAIAAEKL--GG---KALGVDIDPMV------LPQAEANAKRNGVRP 169 (254)
T ss_dssp CEEEEETCTTSH----HHHHHHHT--TC---EEEEEESCGGG------HHHHHHHHHHTTCCC
T ss_pred CEEEEecCCCcH----HHHHHHHh--CC---eEEEEECCHHH------HHHHHHHHHHcCCcE
Confidence 479999999985 33445553 43 99999986532 223344455566653
No 156
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=29.51 E-value=3.1e+02 Score=24.60 Aligned_cols=45 Identities=7% Similarity=-0.016 Sum_probs=28.4
Q ss_pred HHHhhhc--CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 266 AIRQAAQ--GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 266 AILEA~~--g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.+++.+. -...-+|+|+|.|.|..-..|.+.+ .|..++|||+.+.
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~------~~~~~v~~vD~s~ 112 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV------GCTGKVIGIDHIK 112 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH------CTTCEEEEEESCH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh------CCCcEEEEEeCCH
Confidence 4455553 2344589999999986444444333 1345899999864
No 157
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=29.15 E-value=67 Score=29.50 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=31.7
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI 337 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl 337 (540)
+.-.|+|+|.|.|. +...||.+. |..++|||+.+.. ..+...+.++..++
T Consensus 38 ~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~giD~s~~------~l~~a~~~~~~~~~ 87 (213)
T 2fca_A 38 DNPIHIEVGTGKGQ----FISGMAKQN---PDINYIGIELFKS------VIVTAVQKVKDSEA 87 (213)
T ss_dssp CCCEEEEECCTTSH----HHHHHHHHC---TTSEEEEECSCHH------HHHHHHHHHHHSCC
T ss_pred CCceEEEEecCCCH----HHHHHHHHC---CCCCEEEEEechH------HHHHHHHHHHHcCC
Confidence 34569999999994 444455542 4568999998643 23334445566665
No 158
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=29.11 E-value=1.4e+02 Score=29.30 Aligned_cols=44 Identities=18% Similarity=0.134 Sum_probs=30.0
Q ss_pred hHHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 264 NEAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 264 NqAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.+.|++++.-...-.|+|+|.|.|. +...|+.+ + -++|||+.+.
T Consensus 31 ~~~i~~~~~~~~~~~VLDiG~G~G~----lt~~La~~-~----~~v~~vDi~~ 74 (299)
T 2h1r_A 31 LDKIIYAAKIKSSDIVLEIGCGTGN----LTVKLLPL-A----KKVITIDIDS 74 (299)
T ss_dssp HHHHHHHHCCCTTCEEEEECCTTST----THHHHTTT-S----SEEEEECSCH
T ss_pred HHHHHHhcCCCCcCEEEEEcCcCcH----HHHHHHhc-C----CEEEEEECCH
Confidence 3455666654445589999999996 44556665 2 2899999864
No 159
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=28.16 E-value=1.1e+02 Score=29.03 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=35.8
Q ss_pred cCCcchhhhHhhhHHHHhhhc-CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 252 TTPYISFGFMAANEAIRQAAQ-GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 252 ~sP~~kfahftANqAILEA~~-g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
..||+.=+.+---+ +|+.+. ....-.|+|+|.|.|. +...|+.+ |+. ++|||+.+..
T Consensus 14 ~~~yvsrg~~kL~~-~L~~~~~~~~g~~VLDiGcGtG~----~t~~la~~--g~~--~V~gvDis~~ 71 (232)
T 3opn_A 14 KLRYVSRGGLKLEK-ALKEFHLEINGKTCLDIGSSTGG----FTDVMLQN--GAK--LVYALDVGTN 71 (232)
T ss_dssp CCCSSSTTHHHHHH-HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHT--TCS--EEEEECSSCC
T ss_pred CCCccCCcHHHHHH-HHHHcCCCCCCCEEEEEccCCCH----HHHHHHhc--CCC--EEEEEcCCHH
Confidence 34676666554433 344443 2233579999999994 55566666 222 8999998764
No 160
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=28.16 E-value=1.7e+02 Score=25.19 Aligned_cols=109 Identities=14% Similarity=0.078 Sum_probs=54.4
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-+|+|+|.|.|. +...++.++ .-++|||+.+... .+...+.++..++.-..+++..... ...
T Consensus 45 ~~~vLD~GcG~G~----~~~~~~~~~----~~~v~~vD~~~~~------~~~a~~~~~~~~~~~~~~~~~~d~~--~~~- 107 (187)
T 2fhp_A 45 GGMALDLYSGSGG----LAIEAVSRG----MDKSICIEKNFAA------LKVIKENIAITKEPEKFEVRKMDAN--RAL- 107 (187)
T ss_dssp SCEEEETTCTTCH----HHHHHHHTT----CSEEEEEESCHHH------HHHHHHHHHHHTCGGGEEEEESCHH--HHH-
T ss_pred CCCEEEeCCccCH----HHHHHHHcC----CCEEEEEECCHHH------HHHHHHHHHHhCCCcceEEEECcHH--HHH-
Confidence 3489999999984 333344442 3589999986421 2233344455555312333331110 000
Q ss_pred cccC--ccCCceEEEEeccccccccccccchHHHHHHHH---HhcCCcEEEEEeecCCC
Q 009215 356 ENLD--LREGEALFVNSIMHLHKYVKESRGSLKAILQAI---KRLNPTLLTVVEQDANH 409 (540)
Q Consensus 356 ~~L~--i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I---r~L~PkvvvlvEqea~h 409 (540)
..+. -..=+.|+.|..+..+ ..+.+++.+ +-|+|.-+++++.....
T Consensus 108 ~~~~~~~~~fD~i~~~~~~~~~--------~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 108 EQFYEEKLQFDLVLLDPPYAKQ--------EIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHTTCCEEEEEECCCGGGC--------CHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHhcCCCCCEEEECCCCCch--------hHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 0000 1112466666664311 123444444 55899988877655443
No 161
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=27.69 E-value=1.6e+02 Score=27.04 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=23.2
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
.-.|+|+|.|.|. +...||.+-+ .-+++||+.+.
T Consensus 75 ~~~VLDlGcG~G~----~~~~la~~~~---~~~v~gvD~s~ 108 (230)
T 1fbn_A 75 DSKILYLGASAGT----TPSHVADIAD---KGIVYAIEYAP 108 (230)
T ss_dssp TCEEEEESCCSSH----HHHHHHHHTT---TSEEEEEESCH
T ss_pred CCEEEEEcccCCH----HHHHHHHHcC---CcEEEEEECCH
Confidence 3479999999984 3444554422 34899999864
No 162
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=27.39 E-value=3.9e+02 Score=25.31 Aligned_cols=112 Identities=11% Similarity=0.033 Sum_probs=57.3
Q ss_pred HHHHhhhc---CCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeE
Q 009215 265 EAIRQAAQ---GKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEF 341 (540)
Q Consensus 265 qAILEA~~---g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF 341 (540)
.+|+++++ =...=.|+|+|.+.|. |...+..+.. + .=+|+||+.+.. .++.+.+.++.. -++.+
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v~-~----~G~V~avD~s~~------~l~~l~~~a~~r-~nv~~ 129 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDIIE-L----NGKAYGVEFSPR------VVRELLLVAQRR-PNIFP 129 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHHT-T----TSEEEEEECCHH------HHHHHHHHHHHC-TTEEE
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHhC-C----CCEEEEEECcHH------HHHHHHHHhhhc-CCeEE
Confidence 34555553 2333578999999997 6666655542 2 238999997542 123343444432 23333
Q ss_pred EEeeccCCCCCCcc-cccCccCCceEEEEeccccccccccccchHHHHHHHHH-hcCCcEEEEE
Q 009215 342 SMISEPVTPSLLTR-ENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIK-RLNPTLLTVV 403 (540)
Q Consensus 342 ~~v~~~~~~~~l~~-~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir-~L~Pkvvvlv 403 (540)
. ...+. .... ..+ ..+=++|++|..+ +...+.++..++ -|+|.-..++
T Consensus 130 i--~~Da~--~~~~~~~~-~~~~D~I~~d~a~---------~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 130 L--LADAR--FPQSYKSV-VENVDVLYVDIAQ---------PDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp E--ECCTT--CGGGTTTT-CCCEEEEEECCCC---------TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred E--Ecccc--cchhhhcc-ccceEEEEecCCC---------hhHHHHHHHHHHHhCCCCeEEEE
Confidence 2 21111 1000 011 1112444444321 245566777776 8999776654
No 163
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=27.38 E-value=80 Score=28.44 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=32.1
Q ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHHHhhcCCCCCChh
Q 009215 161 LHLVHLLLACAEAVGCRDTKLAVSMLSQIWASATPWGDSL 200 (540)
Q Consensus 161 ~~Lv~LLl~CAeAV~~gd~~~A~~lL~~L~~~aSp~Gd~~ 200 (540)
..+.+-|-+|++++..||.+.|+.||..- ...-|+||-.
T Consensus 56 ~EIW~ALraA~~~~e~~Dl~tAQ~IldaA-gItvp~gdL~ 94 (137)
T 2ksn_A 56 KEIWDALKAAAHAFESNDHELAQAIIDGA-NITLPHGALT 94 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHH-SCBCSSCCSS
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHc-CCcccCCcHH
Confidence 56889999999999999999999999875 3456677633
No 164
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=26.97 E-value=4e+02 Score=25.35 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=20.6
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecC
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLIS 314 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~ 314 (540)
-.|+|+|.|.|. +-..|+.+ |. -++|||+.
T Consensus 81 ~~vLDlG~G~G~----~~~~~a~~--~~--~~v~~~D~ 110 (281)
T 3bzb_A 81 KTVCELGAGAGL----VSIVAFLA--GA--DQVVATDY 110 (281)
T ss_dssp CEEEETTCTTSH----HHHHHHHT--TC--SEEEEEEC
T ss_pred CeEEEecccccH----HHHHHHHc--CC--CEEEEEeC
Confidence 479999999984 22245554 21 38999998
No 165
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=26.86 E-value=81 Score=29.25 Aligned_cols=102 Identities=11% Similarity=0.137 Sum_probs=55.0
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeEEEeeccCCCCC
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEFSMISEPVTPSL 352 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF~~v~~~~~~~~ 352 (540)
..-.|+|+|.+.|.- ...||.. .|..++|+|+.+.. ..+...+.++..++. ++|..-. .. .
T Consensus 71 ~~~~vLDiG~G~G~~----~~~la~~---~~~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~v~~~~~d--~~--~ 133 (232)
T 3ntv_A 71 NVKNILEIGTAIGYS----SMQFASI---SDDIHVTTIERNET------MIQYAKQNLATYHFENQVRIIEGN--AL--E 133 (232)
T ss_dssp TCCEEEEECCSSSHH----HHHHHTT---CTTCEEEEEECCHH------HHHHHHHHHHHTTCTTTEEEEESC--GG--G
T ss_pred CCCEEEEEeCchhHH----HHHHHHh---CCCCEEEEEECCHH------HHHHHHHHHHHcCCCCcEEEEECC--HH--H
Confidence 335799999999843 3334442 13569999998642 233344556666753 4444322 10 1
Q ss_pred CcccccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 353 LTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 353 l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
.-.+.+ -.+=+.|+++.. ......+|+.+ +.|+|.-+++++
T Consensus 134 ~~~~~~-~~~fD~V~~~~~----------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 134 QFENVN-DKVYDMIFIDAA----------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp CHHHHT-TSCEEEEEEETT----------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHhhc-cCCccEEEEcCc----------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 000001 012245554432 22345566655 778999999885
No 166
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=25.59 E-value=2.7e+02 Score=26.14 Aligned_cols=40 Identities=18% Similarity=0.068 Sum_probs=26.8
Q ss_pred CceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEE
Q 009215 363 GEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVV 403 (540)
Q Consensus 363 ~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkvvvlv 403 (540)
+..=+|-+.+.|||+... ......+|+.| |-|+|--..+.
T Consensus 155 ~~fD~V~~~~~l~~i~~~-~~~~~~~l~~i~r~LKPGG~li~ 195 (263)
T 2a14_A 155 PLADCVLTLLAMECACCS-LDAYRAALCNLASLLKPGGHLVT 195 (263)
T ss_dssp CCEEEEEEESCHHHHCSS-HHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCCEeeehHHHHHhcCC-HHHHHHHHHHHHHHcCCCcEEEE
Confidence 446677788889987543 23455666666 66899876655
No 167
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=25.28 E-value=1.5e+02 Score=27.07 Aligned_cols=102 Identities=14% Similarity=0.240 Sum_probs=51.7
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-.|+|+|.|.|.-=. .|+.+- |..++|+|+.+.. ..+...+.++..|+.-..+++..... ..- .
T Consensus 56 ~~vLdiG~G~G~~~~----~la~~~---~~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~-~ 119 (233)
T 2gpy_A 56 ARILEIGTAIGYSAI----RMAQAL---PEATIVSIERDER------RYEEAHKHVKALGLESRIELLFGDAL--QLG-E 119 (233)
T ss_dssp SEEEEECCTTSHHHH----HHHHHC---TTCEEEEECCCHH------HHHHHHHHHHHTTCTTTEEEECSCGG--GSH-H
T ss_pred CEEEEecCCCcHHHH----HHHHHC---CCCEEEEEECCHH------HHHHHHHHHHHcCCCCcEEEEECCHH--HHH-H
Confidence 479999999885333 333321 2469999998642 12334445556665322333321110 100 0
Q ss_pred ccC-ccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEe
Q 009215 357 NLD-LREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVE 404 (540)
Q Consensus 357 ~L~-i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvE 404 (540)
.+. -.+=+.|+++.... ....+|+. .+.|+|.-++++.
T Consensus 120 ~~~~~~~fD~I~~~~~~~----------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 120 KLELYPLFDVLFIDAAKG----------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHTTSCCEEEEEEEGGGS----------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred hcccCCCccEEEECCCHH----------HHHHHHHHHHHHcCCCeEEEEE
Confidence 000 01225566554421 23455554 5778999888874
No 168
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=25.06 E-value=70 Score=30.37 Aligned_cols=56 Identities=9% Similarity=0.088 Sum_probs=44.1
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEEeecCCCCCCchhHHHHHHHHHHHHHHHhhhh
Q 009215 379 KESRGSLKAILQAIKRLNPTLLTVVEQDANHNGPFFLGRFLESLHYYSAIFDSLEA 434 (540)
Q Consensus 379 ~es~~~r~~~L~~Ir~L~PkvvvlvEqea~hnsp~F~~RF~EAL~yYsAlFDSLea 434 (540)
.+..-+.+.+++.+++.+.+..+.+|.+.......-.+-+.+++.|...+++.|..
T Consensus 234 G~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~ 289 (290)
T 3tva_A 234 GTGDVGMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIAN 289 (290)
T ss_dssp TSSSSCHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCceeCHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcC
Confidence 33344688999999999999999999886643234678899999999999887753
No 169
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=24.77 E-value=85 Score=28.45 Aligned_cols=102 Identities=13% Similarity=0.140 Sum_probs=53.5
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc--eeEEEeeccCCCCCCc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN--LEFSMISEPVTPSLLT 354 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~--~eF~~v~~~~~~~~l~ 354 (540)
-+|+|+|.+.|. +...||.+- ||.-++|+|+.+.. ..+...+.++..|+. +.|..... . ..+.
T Consensus 60 ~~vLdiG~G~G~----~~~~la~~~--~~~~~v~~vD~~~~------~~~~a~~~~~~~~~~~~v~~~~~d~--~-~~~~ 124 (223)
T 3duw_A 60 RNILEIGTLGGY----STIWLARGL--SSGGRVVTLEASEK------HADIARSNIERANLNDRVEVRTGLA--L-DSLQ 124 (223)
T ss_dssp SEEEEECCTTSH----HHHHHHTTC--CSSCEEEEEESCHH------HHHHHHHHHHHTTCTTTEEEEESCH--H-HHHH
T ss_pred CEEEEecCCccH----HHHHHHHhC--CCCCEEEEEECCHH------HHHHHHHHHHHcCCCCcEEEEEcCH--H-HHHH
Confidence 479999999983 233445432 33569999997642 123344455666653 44433221 0 0000
Q ss_pred ccccC---ccCCceEEEEeccccccccccccchHHHHHHH-HHhcCCcEEEEEee
Q 009215 355 RENLD---LREGEALFVNSIMHLHKYVKESRGSLKAILQA-IKRLNPTLLTVVEQ 405 (540)
Q Consensus 355 ~~~L~---i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~-Ir~L~PkvvvlvEq 405 (540)
.+. ..+=+.|+++.. ......+|+. .+.|+|.-+++++.
T Consensus 125 --~~~~~~~~~fD~v~~d~~----------~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 125 --QIENEKYEPFDFIFIDAD----------KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp --HHHHTTCCCCSEEEECSC----------GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred --HHHhcCCCCcCEEEEcCC----------cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 000 012245554433 1223455554 57899999888753
No 170
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=24.44 E-value=5.1e+02 Score=25.42 Aligned_cols=56 Identities=13% Similarity=0.277 Sum_probs=31.9
Q ss_pred CCcchhhh-HhhhHH----HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 253 TPYISFGF-MAANEA----IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 253 sP~~kfah-ftANqA----ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
.|=-++++ |..++. |++++.-...-+|+|+|.|.|. |-..|+.+. -++|||+.+..
T Consensus 23 ~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~----lT~~La~~~-----~~V~aVEid~~ 83 (295)
T 3gru_A 23 KPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGI----LTEELAKNA-----KKVYVIEIDKS 83 (295)
T ss_dssp -------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEEESCGG
T ss_pred CCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchH----HHHHHHhcC-----CEEEEEECCHH
Confidence 34445554 444444 5555554455689999999995 444555542 37999998754
No 171
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=24.38 E-value=1.4e+02 Score=27.68 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=56.5
Q ss_pred hhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc-eeEEEeecc
Q 009215 269 QAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN-LEFSMISEP 347 (540)
Q Consensus 269 EA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~-~eF~~v~~~ 347 (540)
......+.-.|+|+|.+.|.-=..|.+++ ||.-+||+|+.+.. ..+...+.++..|+. =..+++...
T Consensus 50 ~~~~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~~~------~~~~a~~~~~~~g~~~~~i~~~~gd 117 (221)
T 3dr5_A 50 ATTNGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPESE------HQRQAKALFREAGYSPSRVRFLLSR 117 (221)
T ss_dssp HHSCCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSCHH------HHHHHHHHHHHTTCCGGGEEEECSC
T ss_pred HhhCCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECCHH------HHHHHHHHHHHcCCCcCcEEEEEcC
Confidence 33344445689999999885444444443 23458999998642 223344556666664 223333211
Q ss_pred CCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHH-HHHhcCCcEEEEEe
Q 009215 348 VTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQ-AIKRLNPTLLTVVE 404 (540)
Q Consensus 348 ~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~-~Ir~L~PkvvvlvE 404 (540)
.. +.+. .+.-.+=+.|+++.. ......+|+ ..+.|+|.-+++++
T Consensus 118 a~-~~l~--~~~~~~fD~V~~d~~----------~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 118 PL-DVMS--RLANDSYQLVFGQVS----------PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp HH-HHGG--GSCTTCEEEEEECCC----------TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred HH-HHHH--HhcCCCcCeEEEcCc----------HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 00 0000 010011234444332 122344554 45889999999884
No 172
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=23.76 E-value=1.2e+02 Score=27.98 Aligned_cols=101 Identities=11% Similarity=0.100 Sum_probs=51.8
Q ss_pred eeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCcc
Q 009215 276 SLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTR 355 (540)
Q Consensus 276 ~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~ 355 (540)
.-+|+|+|.|.|.-=..| |.+ .|..++|||+.+.. ..+.+.+.++..++. ..+++...+ .++..
T Consensus 71 ~~~vLDiG~G~G~~~~~l----a~~---~~~~~v~~vD~s~~------~~~~a~~~~~~~~~~-~v~~~~~d~--~~~~~ 134 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPI----KIC---FPHLHVTIVDSLNK------RITFLEKLSEALQLE-NTTFCHDRA--ETFGQ 134 (240)
T ss_dssp CCEEEEECSSSCTTHHHH----HHH---CTTCEEEEEESCHH------HHHHHHHHHHHHTCS-SEEEEESCH--HHHTT
T ss_pred CCEEEEecCCCCHHHHHH----HHh---CCCCEEEEEeCCHH------HHHHHHHHHHHcCCC-CEEEEeccH--HHhcc
Confidence 348999999999633222 321 13468999998642 223344455566663 133333111 01110
Q ss_pred cccCc-cCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 356 ENLDL-REGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 356 ~~L~i-~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
. ... ..=+.|+.+. + ...+.+++.+ +-|+|.-.+++.
T Consensus 135 ~-~~~~~~fD~V~~~~-~----------~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 135 R-KDVRESYDIVTARA-V----------ARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp C-TTTTTCEEEEEEEC-C----------SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred c-ccccCCccEEEEec-c----------CCHHHHHHHHHHhcCCCCEEEEE
Confidence 0 000 0113343322 1 2367788877 778998777663
No 173
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=23.67 E-value=60 Score=31.21 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=32.0
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
+.|++++.-...-+|+|+|.|.| .|-..|+.++ .-++|||+.+.
T Consensus 21 ~~iv~~~~~~~~~~VLDiG~G~G----~lt~~L~~~~----~~~v~avEid~ 64 (249)
T 3ftd_A 21 KKIAEELNIEEGNTVVEVGGGTG----NLTKVLLQHP----LKKLYVIELDR 64 (249)
T ss_dssp HHHHHHTTCCTTCEEEEEESCHH----HHHHHHTTSC----CSEEEEECCCH
T ss_pred HHHHHhcCCCCcCEEEEEcCchH----HHHHHHHHcC----CCeEEEEECCH
Confidence 34555655445568999999988 5788888873 34899999864
No 174
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=23.14 E-value=2.5e+02 Score=26.47 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=57.2
Q ss_pred CCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHh---cCCceeEEEeeccCCC
Q 009215 274 KDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATS---LGINLEFSMISEPVTP 350 (540)
Q Consensus 274 ~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~---fgl~~eF~~v~~~~~~ 350 (540)
...-.|+|+|.|.|. +...|+.|- |..+||||+.+... .+...+.++. .++.=..+++...+.
T Consensus 35 ~~~~~VLDlG~G~G~----~~l~la~~~---~~~~v~gvDi~~~~------~~~a~~n~~~~~~~~l~~~v~~~~~D~~- 100 (260)
T 2ozv_A 35 DRACRIADLGAGAGA----AGMAVAARL---EKAEVTLYERSQEM------AEFARRSLELPDNAAFSARIEVLEADVT- 100 (260)
T ss_dssp CSCEEEEECCSSSSH----HHHHHHHHC---TTEEEEEEESSHHH------HHHHHHHTTSGGGTTTGGGEEEEECCTT-
T ss_pred cCCCEEEEeCChHhH----HHHHHHHhC---CCCeEEEEECCHHH------HHHHHHHHHhhhhCCCcceEEEEeCCHH-
Confidence 345689999999994 334455542 45899999986421 1222233333 444312344432221
Q ss_pred CCCcc----cccCccCCceEEEEecccccc-cc----------ccccchHHHHHHHH-HhcCCcEEEEEe
Q 009215 351 SLLTR----ENLDLREGEALFVNSIMHLHK-YV----------KESRGSLKAILQAI-KRLNPTLLTVVE 404 (540)
Q Consensus 351 ~~l~~----~~L~i~~~EaLaVN~~~~LH~-L~----------~es~~~r~~~L~~I-r~L~PkvvvlvE 404 (540)
.+.. ..+.-..=+.|+.|-.+.... .. .......+.+|+.+ +-|+|.-.+++.
T Consensus 101 -~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 101 -LRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp -CCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -HHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 1100 001111236777775554321 00 00122366777765 678998877665
No 175
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=23.01 E-value=1.2e+02 Score=28.30 Aligned_cols=51 Identities=12% Similarity=0.081 Sum_probs=31.9
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN 338 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~ 338 (540)
+.-+|+|+|.|.|.--..|.+.. |..++|||+.+.. ..+...+.++..++.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-------~~~~v~gvD~s~~------~~~~a~~~~~~~~~~ 115 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-------NGWYFLATEVDDM------CFNYAKKNVEQNNLS 115 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-------HCCEEEEEESCHH------HHHHHHHHHHHTTCT
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-------CCCeEEEEECCHH------HHHHHHHHHHHcCCC
Confidence 34589999999996555554443 2368999997642 223334445556654
No 176
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=22.82 E-value=61 Score=30.74 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=29.3
Q ss_pred HHHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 265 EAIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 265 qAILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
+.|++++.-...-+|+|+|.|.|. +...|+.+. -++|||+.+.
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~-----~~v~~vD~~~ 62 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC-----NFVTAIEIDH 62 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS-----SEEEEECSCH
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC-----CeEEEEECCH
Confidence 445555543445589999999994 555666552 4899999864
No 177
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=22.65 E-value=3.1e+02 Score=27.06 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=25.3
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCC
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQ 316 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~ 316 (540)
-+|+|+|.|.| .+...|+.++ |..++|+|+.+.
T Consensus 118 ~~VLdiG~G~G----~~~~~l~~~~---~~~~v~~vDis~ 150 (321)
T 2pt6_A 118 KNVLVVGGGDG----GIIRELCKYK---SVENIDICEIDE 150 (321)
T ss_dssp CEEEEEECTTC----HHHHHHTTCT---TCCEEEEEESCH
T ss_pred CEEEEEcCCcc----HHHHHHHHcC---CCCEEEEEECCH
Confidence 57999999998 4666677653 457999999864
No 178
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=22.27 E-value=1.4e+02 Score=27.35 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=34.6
Q ss_pred CeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC--ceeEEE
Q 009215 275 DSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI--NLEFSM 343 (540)
Q Consensus 275 ~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl--~~eF~~ 343 (540)
..-+|+|+|.|.|. +...|+.+ | .++|||+.+.. ..+...+.++..++ ++.|..
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~---~~v~~vD~s~~------~~~~a~~~~~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G---MRVIAIDIDPV------KIALARNNAEVYGIADKIEFIC 133 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T---CEEEEEESCHH------HHHHHHHHHHHTTCGGGEEEEE
T ss_pred CCCEEEECccccCH----HHHHHHHc--C---CEEEEEECCHH------HHHHHHHHHHHcCCCcCeEEEE
Confidence 34579999999993 44555554 2 68999998642 23445556667776 444443
No 179
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=22.00 E-value=82 Score=29.39 Aligned_cols=46 Identities=9% Similarity=0.004 Sum_probs=29.6
Q ss_pred HHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCC
Q 009215 267 IRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQN 317 (540)
Q Consensus 267 ILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~ 317 (540)
+++.+.+.....|+|+|.|.|. +.-.|+.+- ..|..+||||+.+..
T Consensus 43 ~l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis~~ 88 (250)
T 1o9g_A 43 ALARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVDPA 88 (250)
T ss_dssp HHHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESCHH
T ss_pred HHHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECCHH
Confidence 3444444566899999999993 333444331 114579999998653
No 180
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=21.79 E-value=3.4e+02 Score=27.12 Aligned_cols=97 Identities=18% Similarity=0.196 Sum_probs=51.7
Q ss_pred eEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCceeEEEeeccCCCCCCccc
Q 009215 277 LHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGINLEFSMISEPVTPSLLTRE 356 (540)
Q Consensus 277 VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~~eF~~v~~~~~~~~l~~~ 356 (540)
-.|+|+| |.|. +...|+.+ | |..++|||+.+.. ..+..-+.++..|+. ..+++...+.. .+..
T Consensus 174 ~~VLDlG-G~G~----~~~~la~~--~-~~~~v~~vDi~~~------~l~~a~~~~~~~g~~-~v~~~~~D~~~-~l~~- 236 (373)
T 2qm3_A 174 KDIFVLG-DDDL----TSIALMLS--G-LPKRIAVLDIDER------LTKFIEKAANEIGYE-DIEIFTFDLRK-PLPD- 236 (373)
T ss_dssp CEEEEES-CTTC----HHHHHHHH--T-CCSEEEEECSCHH------HHHHHHHHHHHHTCC-CEEEECCCTTS-CCCT-
T ss_pred CEEEEEC-CCCH----HHHHHHHh--C-CCCEEEEEECCHH------HHHHHHHHHHHcCCC-CEEEEEChhhh-hchh-
Confidence 4799999 9885 22334433 2 3458999997542 233344556666763 33444322110 0110
Q ss_pred ccCccCCceEEEEeccccccccccccchHHHHHHHH-HhcCCcE
Q 009215 357 NLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAI-KRLNPTL 399 (540)
Q Consensus 357 ~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~I-r~L~Pkv 399 (540)
.+ -..=++|++|.++... ....+|+.+ +.|+|.-
T Consensus 237 ~~-~~~fD~Vi~~~p~~~~--------~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 237 YA-LHKFDTFITDPPETLE--------AIRAFVGRGIATLKGPR 271 (373)
T ss_dssp TT-SSCBSEEEECCCSSHH--------HHHHHHHHHHHTBCSTT
T ss_pred hc-cCCccEEEECCCCchH--------HHHHHHHHHHHHcccCC
Confidence 00 0123688888776432 135666655 7889943
No 181
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=21.53 E-value=1.7e+02 Score=27.07 Aligned_cols=61 Identities=15% Similarity=0.064 Sum_probs=35.9
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCCc
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGIN 338 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl~ 338 (540)
.|++.+.-...-.|+|+|.|.|.--..|.+.+ .|..+++|++.+.. ..+...+.++..|++
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~------~~~~~v~~~D~~~~------~~~~a~~~~~~~~~~ 144 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV------GPEGRVVSYEIRED------FAKLAWENIKWAGFD 144 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH------CTTSEEEEECSCHH------HHHHHHHHHHHHTCT
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh------CCCeEEEEEecCHH------HHHHHHHHHHHcCCC
Confidence 45555554455689999999985333333332 14468999998642 123344455556654
No 182
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=20.18 E-value=4.5e+02 Score=23.87 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=54.5
Q ss_pred HHHhhhcCCCeeEEEEccCCCCCchHHHHHHHhcCCCCCCeEEEeEecCCCChhHHHHhHHHHHHHHHhcCC-ceeEEEe
Q 009215 266 AIRQAAQGKDSLHIIDLGMERTLQWPSLIRSLASRPEGPPRIRITCLISNQNLSELKASMKPVLHDATSLGI-NLEFSMI 344 (540)
Q Consensus 266 AILEA~~g~~~VHIIDfgI~~G~QWpsLiqaLA~Rp~GPP~LRITgI~~~~~~~~~~~~~~~L~~~a~~fgl-~~eF~~v 344 (540)
.+++.+.-...-.|+|+|.|.|..-..|.+.. + .++|+|+.+... .+...+.++..|+ ++.| +
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~------~--~~v~~vD~~~~~------~~~a~~~~~~~~~~~v~~--~ 145 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALISEIV------K--TDVYTIERIPEL------VEFAKRNLERAGVKNVHV--I 145 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH------C--SCEEEEESCHHH------HHHHHHHHHHTTCCSEEE--E
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh------C--CEEEEEeCCHHH------HHHHHHHHHHcCCCCcEE--E
Confidence 44555543444579999999885444443333 1 489999975421 2233344555664 3333 3
Q ss_pred eccCCCCCCcccccCccCCceEEEEeccccccccccccchHHHHHHHHHhcCCcEEEEEe
Q 009215 345 SEPVTPSLLTRENLDLREGEALFVNSIMHLHKYVKESRGSLKAILQAIKRLNPTLLTVVE 404 (540)
Q Consensus 345 ~~~~~~~~l~~~~L~i~~~EaLaVN~~~~LH~L~~es~~~r~~~L~~Ir~L~PkvvvlvE 404 (540)
..... ..+.. -.+-+.|+++.. ++++.+ ...+.|+|.-.+++.
T Consensus 146 ~~d~~-~~~~~----~~~fD~Ii~~~~--~~~~~~----------~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 146 LGDGS-KGFPP----KAPYDVIIVTAG--APKIPE----------PLIEQLKIGGKLIIP 188 (235)
T ss_dssp ESCGG-GCCGG----GCCEEEEEECSB--BSSCCH----------HHHHTEEEEEEEEEE
T ss_pred ECCcc-cCCCC----CCCccEEEECCc--HHHHHH----------HHHHhcCCCcEEEEE
Confidence 21110 01110 001245555443 456543 356788998766654
Done!