Query 009216
Match_columns 540
No_of_seqs 155 out of 1508
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 21:27:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9d_G T-complex protein 1 sub 100.0 2E-118 8E-123 964.0 44.5 532 1-536 1-534 (550)
2 3iyg_H T-complex protein 1 sub 100.0 3E-116 1E-120 941.5 59.7 514 13-529 1-514 (515)
3 1q3q_A Thermosome alpha subuni 100.0 2E-116 8E-121 949.1 56.6 524 1-534 1-530 (548)
4 3ko1_A Chaperonin; 9-fold symm 100.0 1E-116 5E-121 949.7 53.0 522 5-535 12-539 (553)
5 3ruv_A Chaperonin, CPN; double 100.0 1E-115 3E-120 943.3 57.1 518 6-534 3-524 (543)
6 1a6d_B Thermosome (beta subuni 100.0 9E-116 3E-120 944.5 54.3 520 6-535 4-529 (543)
7 3iyg_A T-complex protein 1 sub 100.0 8E-114 3E-118 926.7 59.6 505 16-529 3-528 (529)
8 3iyg_B T-complex protein 1 sub 100.0 1E-113 4E-118 922.5 59.4 509 15-531 2-513 (513)
9 1a6d_A Thermosome (alpha subun 100.0 1E-114 5E-119 934.8 51.7 513 8-532 7-525 (545)
10 3iyg_G T-complex protein 1 sub 100.0 1E-113 5E-118 921.7 58.7 505 16-529 2-514 (515)
11 3p9d_A T-complex protein 1 sub 100.0 3E-114 1E-118 933.9 49.1 525 1-535 1-554 (559)
12 3p9d_C T-complex protein 1 sub 100.0 1E-113 4E-118 928.9 45.8 517 5-531 1-588 (590)
13 3iyg_E T-complex protein 1 sub 100.0 7E-112 2E-116 909.8 58.7 506 16-528 3-514 (515)
14 3iyg_Z T-complex protein 1 sub 100.0 2E-112 8E-117 911.7 55.1 501 16-528 3-516 (517)
15 3p9d_D T-complex protein 1 sub 100.0 8E-114 3E-118 925.6 43.5 509 12-529 8-528 (528)
16 3iyg_D T-complex protein 1 sub 100.0 4E-112 1E-116 911.2 56.7 503 16-529 4-518 (518)
17 3p9d_E T-complex protein 1 sub 100.0 8E-113 3E-117 923.0 51.0 520 7-531 27-560 (562)
18 3p9d_B T-complex protein 1 sub 100.0 6E-113 2E-117 920.5 39.3 519 9-535 3-524 (527)
19 3p9d_H T-complex protein 1 sub 100.0 8E-113 3E-117 924.1 38.0 520 7-537 9-556 (568)
20 3iyg_Q T-complex protein 1 sub 100.0 5E-110 2E-114 894.6 58.3 502 14-528 1-511 (512)
21 3p9d_F T-complex protein 1 sub 100.0 5E-112 2E-116 916.0 38.6 519 9-535 3-543 (546)
22 3aq1_B Thermosome subunit; gro 100.0 1E-104 5E-109 849.5 42.4 475 51-535 1-482 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.2E-97 4E-102 799.7 49.0 470 17-537 4-533 (543)
24 1kp8_A Groel protein; chaperon 100.0 1.5E-96 5E-101 790.0 45.3 464 17-533 4-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 1.2E-97 4E-102 799.2 35.7 465 17-533 5-529 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 7.5E-97 3E-101 790.0 34.3 466 17-536 4-528 (546)
27 1gml_A T-complex protein 1 sub 100.0 1.7E-37 5.7E-42 286.5 17.9 173 208-383 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 1.2E-32 4E-37 248.9 14.3 154 214-370 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.4 7.8E-13 2.7E-17 119.3 11.4 147 211-397 2-169 (194)
30 1srv_A Protein (groel (HSP60 c 99.4 7.3E-13 2.5E-17 113.9 10.4 123 216-365 1-143 (145)
31 3osx_A 60 kDa chaperonin; alph 99.4 8.6E-12 2.9E-16 112.7 14.5 144 214-397 12-176 (201)
32 1o13_A Probable NIFB protein; 56.7 23 0.00079 29.8 6.4 52 280-332 68-119 (136)
33 2yx6_A Hypothetical protein PH 54.5 28 0.00096 28.4 6.5 52 279-331 54-105 (121)
34 1eo1_A Hypothetical protein MT 53.0 38 0.0013 27.7 7.1 52 280-332 57-108 (124)
35 2wfb_A Putative uncharacterize 51.1 33 0.0011 27.9 6.4 51 279-330 58-109 (120)
36 2re2_A Uncharacterized protein 40.3 56 0.0019 27.4 6.2 51 279-331 70-120 (136)
37 1rdu_A Conserved hypothetical 35.9 36 0.0012 27.5 4.2 51 280-331 54-104 (116)
38 2qtd_A Uncharacterized protein 27.8 1.2E+02 0.0042 23.6 6.1 47 282-330 50-96 (105)
39 2pw9_A Putative formate dehydr 23.0 69 0.0024 30.4 4.2 42 278-319 205-246 (268)
40 3psh_A Protein HI_1472; substr 21.9 1.4E+02 0.0047 28.6 6.3 52 281-332 77-154 (326)
41 2wi8_A Iron-uptake system-bind 20.1 1.9E+02 0.0066 27.3 7.0 52 281-332 89-144 (311)
No 1
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.3e-118 Score=963.98 Aligned_cols=532 Identities=58% Similarity=0.947 Sum_probs=496.4
Q ss_pred Ccc-cCchhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHH
Q 009216 1 MAA-MMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAA 79 (540)
Q Consensus 1 ~~~-~~~~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a 79 (540)
|+. +|++|+.+|++++++.+|.+++.+||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|
T Consensus 1 ~~~~~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~A 80 (550)
T 3p9d_G 1 MNFGSQTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAA 80 (550)
T ss_dssp ---------------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHH
T ss_pred CCcccCCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHH
Confidence 444 5788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHH
Q 009216 80 KILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLS 159 (540)
Q Consensus 80 kll~~~~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~ 159 (540)
||++++|++|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..++ .+++.|.
T Consensus 81 kll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~-~~~~~L~ 159 (550)
T 3p9d_G 81 KTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKS-SGRELLE 159 (550)
T ss_dssp HHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC-------CHH
T ss_pred HHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc-hhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999875431 1257899
Q ss_pred HHHHHhhccCcCCcchHHHHHHHHHHHhhcCCCC-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCc
Q 009216 160 KCAATTLSSKLIGGEKEFFASMVVDAVGAIGDGD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNP 238 (540)
Q Consensus 160 ~ia~tsl~sk~~~~~~~~ls~li~~Ai~~~~~~~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~ 238 (540)
++|+|+++||+++.++++|++|++||+.++++++ |.++|+|++++|++++||++++|++|+++|.||||.+||++++||
T Consensus 160 ~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~ 239 (550)
T 3p9d_G 160 RCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNP 239 (550)
T ss_dssp HHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSC
T ss_pred HHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCc
Confidence 9999999999999999999999999999998655 889999999999999999999999999999999999999999999
Q ss_pred eEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCC
Q 009216 239 KILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVA 318 (540)
Q Consensus 239 ~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~ 318 (540)
+|++++++|++++++.++++.+++++++.++++.|++++++++++|++.|++||+++++|++.+++||+++||+++++++
T Consensus 240 kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~ 319 (550)
T 3p9d_G 240 KILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVS 319 (550)
T ss_dssp CEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCC
T ss_pred eEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHH
Q 009216 319 EEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMI 398 (540)
Q Consensus 319 ~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~ 398 (540)
+++|+|||++|||++++++++++++.+|+|+.|++.++++++|++|+||+++++|||+|||+|+.+++|.||+++|||++
T Consensus 320 k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~ 399 (550)
T 3p9d_G 320 ADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMI 399 (550)
T ss_dssp TTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCC
Q 009216 399 VRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG 478 (540)
Q Consensus 399 ~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~ 478 (540)
+|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. |+
T Consensus 400 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~- 476 (550)
T 3p9d_G 400 VKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSK--GE- 476 (550)
T ss_dssp HHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHH--SC-
T ss_pred HHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CC-
Confidence 999999999999999999999999999998899999999999999999999999999999999999999999866 65
Q ss_pred CCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCCC
Q 009216 479 APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGIRE 536 (540)
Q Consensus 479 ~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~~~ 536 (540)
.++|||+.+|++.||++.|||||+.||+++|++|+|+|++||+||++|...|.+.++.
T Consensus 477 ~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 534 (550)
T 3p9d_G 477 KWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANA 534 (550)
T ss_dssp SCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC----
T ss_pred CceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccC
Confidence 7899999999999999999999999999999999999999999999999887765544
No 2
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.1e-116 Score=941.52 Aligned_cols=514 Identities=68% Similarity=1.067 Sum_probs=495.1
Q ss_pred cccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccc
Q 009216 13 KEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (540)
Q Consensus 13 ~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 92 (540)
++++++++|.+++.+||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|++|+++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCC
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (540)
+||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+..+.++.|.++|+|+++||+++
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999864442223678899999999999999
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecccccccc
Q 009216 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (540)
Q Consensus 173 ~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~~ 252 (540)
.++++|++|++||+.+++.+-|.++|+|+++.|++.+||++++|++|+++|.||||.++|++++||+|++++++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~ 240 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAE 240 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEccccccccc
Confidence 99999999999999999743378899999999999999999999999999999999888999999999999999999999
Q ss_pred cccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCCe
Q 009216 253 KENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (540)
Q Consensus 253 ~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa~ 332 (540)
+.++++.++++++++++.++|+++++++++++++.|++|||++++|++++++||+++||++++++++++|+|||++|||+
T Consensus 241 e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa~ 320 (515)
T 3iyg_H 241 KDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGS 320 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecC
Q 009216 333 VQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGG 412 (540)
Q Consensus 333 ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGG 412 (540)
++++++++++++||+|+.|++.++|+++|++|+||+++..|||+|||+|+.+++|.||+++|||+++|++++++++||||
T Consensus 321 ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGG 400 (515)
T 3iyg_H 321 IQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGG 400 (515)
T ss_pred EeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred CcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCcccc
Q 009216 413 GAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIAD 492 (540)
Q Consensus 413 G~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d 492 (540)
|++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. ++ .++|||+.+|++.|
T Consensus 401 Ga~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~~g~~~d 477 (515)
T 3iyg_H 401 GAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQ--GG-MWYGVDINTEDIAD 477 (515)
T ss_pred cHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhc--cC-CCeeEeCCCCcccc
Confidence 9999999999999998899999999999999999999999999999999999999999876 65 78999999999999
Q ss_pred cccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 009216 493 SFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (540)
Q Consensus 493 ~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~ 529 (540)
|++.|||||+.||+++|++|+|+|++|||||++|+..
T Consensus 478 m~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 478 NFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred cHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999754
No 3
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.3e-116 Score=949.07 Aligned_cols=524 Identities=35% Similarity=0.572 Sum_probs=497.9
Q ss_pred CcccCchhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHH
Q 009216 1 MAAMMQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAK 80 (540)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~ak 80 (540)
|+.++++|+.+|+++.++.+|.+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+||
T Consensus 1 m~~~~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Ak 80 (548)
T 1q3q_A 1 MAQLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAK 80 (548)
T ss_dssp --------CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHH
T ss_pred CCCcCCCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHH
Confidence 67766677888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHH
Q 009216 81 ILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSK 160 (540)
Q Consensus 81 ll~~~~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ 160 (540)
|++++|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.+
T Consensus 81 ll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~~~l~~ 156 (548)
T 1q3q_A 81 MMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDD----EETLLK 156 (548)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC----HHHHHH
T ss_pred HHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----HHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999997655 689999
Q ss_pred HHHHhhccCcCCcchHHHHHHHHHHHhhcCCC-----C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCcc
Q 009216 161 CAATTLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234 (540)
Q Consensus 161 ia~tsl~sk~~~~~~~~ls~li~~Ai~~~~~~-----~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~ 234 (540)
+++|+|+||+.++++++|++|++||+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++
T Consensus 157 va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ 233 (548)
T 1q3q_A 157 IAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRM---PKR 233 (548)
T ss_dssp HHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTS---CSE
T ss_pred HHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCC---cce
Confidence 99999999999999999999999999999753 1 56799999999999999999999999999999986 789
Q ss_pred ccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeE
Q 009216 235 FLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCA 314 (540)
Q Consensus 235 ~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i 314 (540)
++||||++++++|++++++.++++.++++++++++.++|+++++++++++++.|++|||++++|++.+++||.++||+++
T Consensus 234 ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av 313 (548)
T 1q3q_A 234 VENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAV 313 (548)
T ss_dssp ESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEE
T ss_pred ecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCChHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHH
Q 009216 315 GRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHD 394 (540)
Q Consensus 315 ~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~d 394 (540)
+++++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|
T Consensus 314 ~~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~D 393 (548)
T 1q3q_A 314 RRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALED 393 (548)
T ss_dssp CSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCC
Q 009216 395 AIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALP 474 (540)
Q Consensus 395 al~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~ 474 (540)
||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..
T Consensus 394 Al~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~- 472 (548)
T 1q3q_A 394 AVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN- 472 (548)
T ss_dssp HHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999998865
Q ss_pred CCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCC
Q 009216 475 TGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGI 534 (540)
Q Consensus 475 ~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~ 534 (540)
++ .++|||..+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|.+++
T Consensus 473 -~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 473 -RG-LGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp -HC-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred -CC-CCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 55 78999999999999999999999999999999999999999999999998776543
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.4e-116 Score=949.66 Aligned_cols=522 Identities=39% Similarity=0.651 Sum_probs=484.5
Q ss_pred CchhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHH
Q 009216 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVD 84 (540)
Q Consensus 5 ~~~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~ 84 (540)
.++|+.+|++++++.+|.+++.+|+.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||+++
T Consensus 12 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 91 (553)
T 3ko1_A 12 EGIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQ 91 (553)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHH
T ss_pred CCCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHH
Q 009216 85 IAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAAT 164 (540)
Q Consensus 85 ~~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~t 164 (540)
+|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++++|
T Consensus 92 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~e~L~~vA~t 167 (553)
T 3ko1_A 92 IAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIND----TDLLRKIAMT 167 (553)
T ss_dssp HHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTC----HHHHHHHHHH
T ss_pred HhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCc----HHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987655 6899999999
Q ss_pred hhccCcCCcchHHHHHHHHHHHhhcCCC-----C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCc
Q 009216 165 TLSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNP 238 (540)
Q Consensus 165 sl~sk~~~~~~~~ls~li~~Ai~~~~~~-----~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~ 238 (540)
+++||+.+.++++|++|++||+.+++++ . |.++|+|+++.|++++||++++|++|+++|.||+| |++++||
T Consensus 168 sl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m---~~~ien~ 244 (553)
T 3ko1_A 168 SLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGM---PKRLENA 244 (553)
T ss_dssp HHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTS---CSCCBSC
T ss_pred HhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCC---ccccccc
Confidence 9999999999999999999999999864 1 67789999999999999999999999999999985 8999999
Q ss_pred eEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCC
Q 009216 239 KILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVA 318 (540)
Q Consensus 239 ~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~ 318 (540)
||++++++|++++++.++++.+++++++.++++.|++++++++++|++.|++|||++++|++.+++||.++||+++++++
T Consensus 245 kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~ 324 (553)
T 3ko1_A 245 KIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAK 324 (553)
T ss_dssp EEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCC
T ss_pred eEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHH
Q 009216 319 EEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMI 398 (540)
Q Consensus 319 ~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~ 398 (540)
+++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||++
T Consensus 325 k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~ 404 (553)
T 3ko1_A 325 KSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGT 404 (553)
T ss_dssp HHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCC
Q 009216 399 VRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEG 478 (540)
Q Consensus 399 ~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~ 478 (540)
+|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. |++
T Consensus 405 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~~ 482 (553)
T 3ko1_A 405 VADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHEN--ENN 482 (553)
T ss_dssp HHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCS--GGG
T ss_pred HHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhC--cCC
Confidence 999999999999999999999999999998899999999999999999999999999999999999999999865 322
Q ss_pred CCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCC
Q 009216 479 APYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGIR 535 (540)
Q Consensus 479 ~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~~ 535 (540)
.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|.+++.
T Consensus 483 ~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~ 539 (553)
T 3ko1_A 483 KWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGE 539 (553)
T ss_dssp TTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC-------
T ss_pred ceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCC
Confidence 579999999999999999999999999999999999999999999999987766544
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=9.8e-116 Score=943.28 Aligned_cols=518 Identities=36% Similarity=0.589 Sum_probs=497.7
Q ss_pred chhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHH
Q 009216 6 QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (540)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~ 85 (540)
++| .+|++++++.+|.+++.+|+.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++
T Consensus 3 ~~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 81 (543)
T 3ruv_A 3 QQP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEV 81 (543)
T ss_dssp -CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHH
T ss_pred CCC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHH
Confidence 345 8889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHh
Q 009216 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATT 165 (540)
Q Consensus 86 ~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~ts 165 (540)
|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+|+
T Consensus 82 a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d----~~~L~~va~ts 157 (543)
T 3ruv_A 82 AKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQD----KEILTKIAMTS 157 (543)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTC----HHHHHHHHHHH
T ss_pred HHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----HHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988655 68999999999
Q ss_pred hccCcCCcchHHHHHHHHHHHhhcCCC-C--CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEE
Q 009216 166 LSSKLIGGEKEFFASMVVDAVGAIGDG-D--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242 (540)
Q Consensus 166 l~sk~~~~~~~~ls~li~~Ai~~~~~~-~--d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill 242 (540)
++||+.+.++++|++|++||+.+++++ . |.++|+|+++.|++++||++++|++|+++|.|||| |++++||||++
T Consensus 158 l~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m---~~~~~n~kIll 234 (543)
T 3ruv_A 158 ITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQM---PKKVTDAKIAL 234 (543)
T ss_dssp HHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTS---CSEEEEEEEEE
T ss_pred hcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccc---cccccCcEEEE
Confidence 999999999999999999999999875 2 67889999999999999999999999999999985 89999999999
Q ss_pred eecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHH
Q 009216 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDL 322 (540)
Q Consensus 243 ~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~l 322 (540)
++++|++++++.++++.+++++++.+++++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|
T Consensus 235 ~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~l 314 (543)
T 3ruv_A 235 LNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDM 314 (543)
T ss_dssp ESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHH
Q 009216 323 LRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRA 402 (540)
Q Consensus 323 e~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~ 402 (540)
+|||++|||+++++++++++++||+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|++
T Consensus 315 e~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a 394 (543)
T 3ruv_A 315 EKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCT 394 (543)
T ss_dssp HHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHcc-CCCCCCCCe
Q 009216 403 TKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHA-LPTGEGAPY 481 (540)
Q Consensus 403 l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~-~~~~~~~~~ 481 (540)
+++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|. . |+ .++
T Consensus 395 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~--~~-~~~ 471 (543)
T 3ruv_A 395 IEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASN--GN-KCA 471 (543)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTT--CC-TTE
T ss_pred HhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhc--CC-cee
Confidence 9999999999999999999999999889999999999999999999999999999999999999999986 4 55 789
Q ss_pred eeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCC
Q 009216 482 GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGI 534 (540)
Q Consensus 482 G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~ 534 (540)
|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|.+++
T Consensus 472 G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 472 GLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp EECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC-----
T ss_pred eeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCC
Confidence 99999999999999999999999999999999999999999999998776543
No 6
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=9.2e-116 Score=944.47 Aligned_cols=520 Identities=37% Similarity=0.605 Sum_probs=483.3
Q ss_pred chhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHH
Q 009216 6 QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (540)
Q Consensus 6 ~~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~ 85 (540)
++|+.+|++++++.+|.+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++
T Consensus 4 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~ 83 (543)
T 1a6d_B 4 GQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEV 83 (543)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CcchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHH
Confidence 35788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHh
Q 009216 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATT 165 (540)
Q Consensus 86 ~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~ts 165 (540)
|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++++|+
T Consensus 84 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~----~~~l~~va~ts 159 (543)
T 1a6d_B 84 SKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADE----KALLLKMAQTS 159 (543)
T ss_dssp HTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTH----HHHHHHHHHHH
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC----HHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999987543 68999999999
Q ss_pred hccCcCCcchHHHHHHHHHHHhhcCCC-----C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCce
Q 009216 166 LSSKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPK 239 (540)
Q Consensus 166 l~sk~~~~~~~~ls~li~~Ai~~~~~~-----~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~ 239 (540)
|+||+.++++++|++|++||+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++++|||
T Consensus 160 l~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~k 236 (543)
T 1a6d_B 160 LNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGM---PDVVKDAK 236 (543)
T ss_dssp HTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTS---CSEEEEEE
T ss_pred hccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCC---cceecCCe
Confidence 999999999999999999999999753 2 67789999999999999999999999999999985 78999999
Q ss_pred EEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCCh
Q 009216 240 ILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAE 319 (540)
Q Consensus 240 Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~ 319 (540)
|++++++|++++++.++++.++++++++++.++|+++++++++++++.|++|||++++|++.+++||.++||++++++++
T Consensus 237 Ill~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k 316 (543)
T 1a6d_B 237 IALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKK 316 (543)
T ss_dssp EEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCH
T ss_pred EEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 009216 320 EDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIV 399 (540)
Q Consensus 320 ~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~ 399 (540)
++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++
T Consensus 317 ~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~ 396 (543)
T 1a6d_B 317 SDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVV 396 (543)
T ss_dssp HHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCC
Q 009216 400 RRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGA 479 (540)
Q Consensus 400 ~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~ 479 (540)
|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. |+ .
T Consensus 397 r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~ 473 (543)
T 1a6d_B 397 ASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAK--GN-K 473 (543)
T ss_dssp HHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHT--TC-T
T ss_pred HHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhC--CC-C
Confidence 99999999999999999999999999998899999999999999999999999999999999999999999876 55 7
Q ss_pred CeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCC
Q 009216 480 PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGIR 535 (540)
Q Consensus 480 ~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~~ 535 (540)
++|||..+|++.||++.|||||+.||+++|++|+|+|++||+||++|...|.+++.
T Consensus 474 ~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~ 529 (543)
T 1a6d_B 474 TYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSS 529 (543)
T ss_dssp TEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC--------
T ss_pred CeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 89999999999999999999999999999999999999999999999987765443
No 7
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.9e-114 Score=926.68 Aligned_cols=505 Identities=36% Similarity=0.589 Sum_probs=484.2
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009216 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (540)
Q Consensus 16 ~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GD 95 (540)
.++++|.+++.+|+.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHh-hcccccCCChHHHHHHHHHHHHHhhccCcCCcc
Q 009216 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGE 174 (540)
Q Consensus 96 Gttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~-~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~~~ 174 (540)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++..+ ++.|.++|+|+++||+.+++
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~----~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELG----RDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHHHHHHHHHhccCccccc
Confidence 9999999999999999999999999999999999999999999998 999987654 68999999999999999999
Q ss_pred hHHHHHHHHHHHhhcCC---C---C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeeccc
Q 009216 175 KEFFASMVVDAVGAIGD---G---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (540)
Q Consensus 175 ~~~ls~li~~Ai~~~~~---~---~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~L 247 (540)
+++|++|++||+.++++ + + |.++|+|+++.|++++||++++|++|++++.||+| |++++||||++++++|
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~kIlll~~~l 235 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGM---PKRIVNAKIACLDFSL 235 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccC---CcccCCceEEEecCCc
Confidence 99999999999999973 2 1 46779999999999999999999999999999874 8999999999999999
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHH
Q 009216 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (540)
Q Consensus 248 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~ 327 (540)
++++++.++++.++++++++.+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||+
T Consensus 236 e~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~ 315 (529)
T 3iyg_A 236 QKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAK 315 (529)
T ss_pred ccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeecccccCCC------CCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHH
Q 009216 328 ATGGTVQTSVNNVV------DEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (540)
Q Consensus 328 ~tGa~ii~~l~~l~------~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~ 401 (540)
+|||++++++++++ ++++|+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+
T Consensus 316 ~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 316 ASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred HhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987764 568999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCC----
Q 009216 402 ATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGE---- 477 (540)
Q Consensus 402 ~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~---- 477 (540)
++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. |+
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~~~~~ 473 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNE--AQVNPE 473 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--cccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999865 32
Q ss_pred ---CCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 009216 478 ---GAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (540)
Q Consensus 478 ---~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~ 529 (540)
+.++|+|+.+|++.||++.|||||+.||+++|++|+|+|+||||||++|...
T Consensus 474 ~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 474 RKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred cccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 1479999999999999999999999999999999999999999999999874
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.1e-113 Score=922.46 Aligned_cols=509 Identities=35% Similarity=0.541 Sum_probs=489.5
Q ss_pred cccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCC--CCeEEecCHHHHhhhccccChHHHHHHHHHhhcccc
Q 009216 15 GTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDK--GTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (540)
Q Consensus 15 ~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~--g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 92 (540)
++++++|.+++.+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+|||++|+++||+|||++++|++|+++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 467889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCC
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (540)
+||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++.+ +..+++.|.++|+|+++||+.+
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~~~~~~~l~~va~tslssK~~~ 160 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSD-EVKFRQDLMNIAGTTLSSKLLT 160 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccc-cccCHHHHHHHHHhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999998732 1113689999999999999999
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecccccccc
Q 009216 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (540)
Q Consensus 173 ~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~~ 252 (540)
+++++|++|++||+.+++++.|.++|+|+++.|++.+||++++|++|+++|.|+ ||++++||||++++++|+++++
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~----m~~~~en~kIll~~~~Le~~k~ 236 (513)
T 3iyg_B 161 HHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN----QPKRIENAKILIANTGMDTDKI 236 (513)
T ss_pred cchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC----CceeecCceEEEEcCCcccccc
Confidence 999999999999999998644778999999999999999999999999999876 6899999999999999999999
Q ss_pred c-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCC
Q 009216 253 K-ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (540)
Q Consensus 253 ~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa 331 (540)
+ .++++.+++++++.++.+.|+++++++++++++.|++|||++++|++.+++||.++||++++++++.+|+|||++|||
T Consensus 237 e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa 316 (513)
T 3iyg_B 237 KIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGG 316 (513)
T ss_pred cccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCC
Confidence 9 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeec
Q 009216 332 TVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAG 411 (540)
Q Consensus 332 ~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpG 411 (540)
++++++++++++++|+|+.|++..+|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|++++++++|||
T Consensus 317 ~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpG 396 (513)
T 3iyg_B 317 EIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYG 396 (513)
T ss_pred EEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred CCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCccc
Q 009216 412 GGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIA 491 (540)
Q Consensus 412 GG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~ 491 (540)
||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. ++ .++|||+.+|++.
T Consensus 397 GGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~~g~~~ 473 (513)
T 3iyg_B 397 GGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSE--GK-TTAGLDMKEGTIG 473 (513)
T ss_pred CcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CC-CceeecCCCCCcc
Confidence 99999999999999998899999999999999999999999999999999999999999976 66 7899999999999
Q ss_pred ccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 009216 492 DSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKR 531 (540)
Q Consensus 492 d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~ 531 (540)
||++.|||||+.||+++|++|+|+|++|||||++|...|+
T Consensus 474 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 474 DMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred chHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999987653
No 9
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.3e-114 Score=934.84 Aligned_cols=513 Identities=38% Similarity=0.635 Sum_probs=484.4
Q ss_pred hHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHh
Q 009216 8 QIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAK 87 (540)
Q Consensus 8 ~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~ 87 (540)
|+.+|++++++.+|.+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhc
Q 009216 88 SQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLS 167 (540)
Q Consensus 88 ~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~ 167 (540)
+|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++| + .+ ++.|.++++|+|+
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~~----~~~l~~va~tsl~ 160 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-TD----DATLRKIALTALS 160 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-CC----HHHHHHHHHHHTT
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-CC----HHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999998 5 34 6899999999999
Q ss_pred cCcCCcchHHHHHHHHHHHhhcCCC-----C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEE
Q 009216 168 SKLIGGEKEFFASMVVDAVGAIGDG-----D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKIL 241 (540)
Q Consensus 168 sk~~~~~~~~ls~li~~Ai~~~~~~-----~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Il 241 (540)
||+.++++++|++|++||+.+++++ + |.++|+|++++|++++||++++|++|+++|.||+| |++++||||+
T Consensus 161 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m---~~~ien~kIl 237 (545)
T 1a6d_A 161 GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKM---PDVVKNAKIA 237 (545)
T ss_dssp TSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTS---CSEEEEEEEE
T ss_pred cccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCC---cceecCCEEE
Confidence 9999999999999999999999754 1 56799999999999999999999999999999986 7999999999
Q ss_pred EeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHH
Q 009216 242 LLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEED 321 (540)
Q Consensus 242 l~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~ 321 (540)
+++++|++++++.++++.++++++++++.++|+++++++++++++.|++|||++++|++.+++||.++||++++++++++
T Consensus 238 l~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~ 317 (545)
T 1a6d_A 238 LIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSD 317 (545)
T ss_dssp EECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHH
T ss_pred EEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHH
Q 009216 322 LLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRR 401 (540)
Q Consensus 322 le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~ 401 (540)
|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+
T Consensus 318 le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~ 397 (545)
T 1a6d_A 318 MEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAI 397 (545)
T ss_dssp HHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCe
Q 009216 402 ATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPY 481 (540)
Q Consensus 402 ~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~ 481 (540)
++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. ++ .++
T Consensus 398 a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~ 474 (545)
T 1a6d_A 398 TKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEK--GR-ISV 474 (545)
T ss_dssp HHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHT--TC-TTE
T ss_pred HHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc--CC-CCc
Confidence 999999999999999999999999998889999999999999999999999999999999999999999876 55 789
Q ss_pred eeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCC
Q 009216 482 GVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRS 532 (540)
Q Consensus 482 G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~ 532 (540)
|||..+|++.||++.|||||+.||+++|++|+|+|++||+||++|...|.+
T Consensus 475 G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 475 GVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp EEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred ceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999999999999987655
No 10
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-113 Score=921.72 Aligned_cols=505 Identities=31% Similarity=0.551 Sum_probs=485.0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009216 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (540)
Q Consensus 16 ~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GD 95 (540)
+++++|.+++.+||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|++|++++||
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 81 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGD 81 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCCcch
Q 009216 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (540)
Q Consensus 96 Gttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 175 (540)
||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++++|+++||.++.+.
T Consensus 82 GTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~~~l~~va~tsl~sK~i~~~~ 157 (515)
T 3iyg_G 82 GTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSN----RDTMLNIINSSITTKVISRWS 157 (515)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC----HHHHHHHHHHHhcCCchhhHH
Confidence 9999999999999999999999999999999999999999999999999988755 689999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCC-C-----CCc-cceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecccc
Q 009216 176 EFFASMVVDAVGAIGDG-D-----RLN-MIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELE 248 (540)
Q Consensus 176 ~~ls~li~~Ai~~~~~~-~-----d~~-~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le 248 (540)
++++++++||+..+.++ + |.+ +|+|++++|++++||++++|++|++++.||+ ||++++||||++++++|+
T Consensus 158 ~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~---m~~~ien~kIll~~~~Le 234 (515)
T 3iyg_G 158 SLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPR---MRRYIKNPRIVLLDSSLE 234 (515)
T ss_pred HHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCC---CcceeeeeEEEEEccccc
Confidence 99999999999988732 1 333 4999999999999999999999999999986 589999999999999999
Q ss_pred cccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHH
Q 009216 249 LKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAA 328 (540)
Q Consensus 249 ~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~ 328 (540)
+++++.++++.+++++++.++++.|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++
T Consensus 235 ~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~ 314 (515)
T 3iyg_G 235 YKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARA 314 (515)
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeecccccCCCCCCccc-ceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 009216 329 TGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNST 407 (540)
Q Consensus 329 tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~ 407 (540)
|||+++++++++++++||+ |+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++++
T Consensus 315 tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ 394 (515)
T 3iyg_G 315 CGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQ 394 (515)
T ss_pred hCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCC
Q 009216 408 VVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINT 487 (540)
Q Consensus 408 vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~ 487 (540)
+|||||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.+ +.+.++|+|+.+
T Consensus 395 ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~--~~~~~~G~d~~~ 472 (515)
T 3iyg_G 395 LVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQ--ENCETWGVNGET 472 (515)
T ss_pred EEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh--cCCCceeeeCCC
Confidence 999999999999999999998999999999999999999999999999999999999999999865 321679999999
Q ss_pred CcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 009216 488 GGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (540)
Q Consensus 488 ~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~ 529 (540)
|++.||++.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 473 g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 473 GTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred CcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999999999999999999999999999999999999753
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.8e-114 Score=933.87 Aligned_cols=525 Identities=35% Similarity=0.576 Sum_probs=495.9
Q ss_pred CcccCc-hhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHH
Q 009216 1 MAAMMQ-PQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAA 79 (540)
Q Consensus 1 ~~~~~~-~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~a 79 (540)
|+.+.+ ++-.-|+++.++.+|.+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~A 80 (559)
T 3p9d_A 1 MSQLFNNSRSDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAG 80 (559)
T ss_dssp -------CCCCSCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHH
T ss_pred CCccccCCccchhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHH
Confidence 566543 3444578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHh-hcccccCCChHHHHHHH
Q 009216 80 KILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKE-LAKSIEGQSLEEKKRLL 158 (540)
Q Consensus 80 kll~~~~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~-~s~~i~~~~~~~~~~~l 158 (540)
||++++|++|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++..+ ++.|
T Consensus 81 kll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~----~e~L 156 (559)
T 3p9d_A 81 KILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLG----KETL 156 (559)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC------CTTH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC----HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 999988643 4789
Q ss_pred HHHHHHhhccCcCCcchHHHHHHHHHHHhhcCC------CC-CCccceeeeecCCCcccceeEEeEEEecccCCccccCC
Q 009216 159 SKCAATTLSSKLIGGEKEFFASMVVDAVGAIGD------GD-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQ 231 (540)
Q Consensus 159 ~~ia~tsl~sk~~~~~~~~ls~li~~Ai~~~~~------~~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~ 231 (540)
.++|+|+++||+.++++++|++|++||+.++++ .. |.+.|+|+++.|++++||++++|++|+++|.||+|
T Consensus 157 ~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m--- 233 (559)
T 3p9d_A 157 INIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAM--- 233 (559)
T ss_dssp HHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTS---
T ss_pred HHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCc---
Confidence 999999999999999999999999999999984 12 67889999999999999999999999999999984
Q ss_pred Ccccc--CceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhC
Q 009216 232 PKKFL--NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR 309 (540)
Q Consensus 232 ~~~~~--n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~ 309 (540)
|++++ ||||++++++|++++++.++++.++++++++++.++|+++++++++++++.|++|||++++|++.+++||.++
T Consensus 234 ~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~ 313 (559)
T 3p9d_A 234 PKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEA 313 (559)
T ss_dssp CSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHT
T ss_pred ceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHc
Confidence 78999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEecCChHHHHHHHHHhCCeecccc------cCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHH
Q 009216 310 DIFCAGRVAEEDLLRVAAATGGTVQTSV------NNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQ 383 (540)
Q Consensus 310 ~I~~i~~v~~~~le~ia~~tGa~ii~~l------~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~ 383 (540)
||++++++++++|+|||++|||++++++ +++++++||+|+.|++.++++++|++|+||+++.+|||+|||+|+.
T Consensus 314 ~I~av~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~ 393 (559)
T 3p9d_A 314 KIMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDY 393 (559)
T ss_dssp TCEEESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHH
T ss_pred CCceEccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHH
Confidence 9999999999999999999999999998 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHH
Q 009216 384 FIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDV 463 (540)
Q Consensus 384 ~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~ 463 (540)
+++|.||+++|||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.++
T Consensus 394 ~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~v 473 (559)
T 3p9d_A 394 SLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSEL 473 (559)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCCCCC------------CeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 009216 464 LNKLRQKHALPTGEGA------------PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKR 531 (540)
Q Consensus 464 ~~~l~~~h~~~~~~~~------------~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~ 531 (540)
+.+|+..|.+ ++ . ++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|.
T Consensus 474 v~~l~~~h~~--~~-~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 550 (559)
T 3p9d_A 474 VAKLRSYHAA--SQ-MAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPE 550 (559)
T ss_dssp HHHHHHHHHT--TS-CCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCC
T ss_pred HHHHHHHHhc--cc-cccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCc
Confidence 9999999865 43 3 7999999999999999999999999999999999999999999999998776
Q ss_pred CCCC
Q 009216 532 SGIR 535 (540)
Q Consensus 532 ~~~~ 535 (540)
+++.
T Consensus 551 ~~~~ 554 (559)
T 3p9d_A 551 PPKE 554 (559)
T ss_dssp CCCC
T ss_pred cccc
Confidence 5533
No 12
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.1e-113 Score=928.90 Aligned_cols=517 Identities=31% Similarity=0.572 Sum_probs=488.3
Q ss_pred CchhHhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHH
Q 009216 5 MQPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVD 84 (540)
Q Consensus 5 ~~~~~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~ 84 (540)
||+|+.+|+++.++.+|.+++.+|+.||..|+++|++||||+||+|||+++.|+|+|||||+|||++|+++||+|||+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e 80 (590)
T 3p9d_C 1 MQAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLE 80 (590)
T ss_dssp -----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHH
T ss_pred CCCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCChHHHHHHHHHHHHHHHHH-HhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHH
Q 009216 85 IAKSQDSEVGDGTTTVVLLAAEFLREAKPF-IEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAA 163 (540)
Q Consensus 85 ~~~~~~~~~GDGttt~vlLa~~Ll~~~~~l-i~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~ 163 (540)
+|++|++++||||||++|||++||+++.++ +++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~e~L~~vA~ 156 (590)
T 3p9d_C 81 LSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN----DAAMKKLIQ 156 (590)
T ss_dssp HTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC----THHHHHHHT
T ss_pred HHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC----HHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999999999999999988754 579999999
Q ss_pred HhhccCcCCcchHHHHHHHHHHHhhcCCCC------------CC-ccceeeeecCCCcccceeEEeEEEecccCCccccC
Q 009216 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDGD------------RL-NMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQ 230 (540)
Q Consensus 164 tsl~sk~~~~~~~~ls~li~~Ai~~~~~~~------------d~-~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~ 230 (540)
|+++||+.++++++|++|++||+..++++. |. ++|+|+++.|++++||++++|++|++++.++.
T Consensus 157 tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~--- 233 (590)
T 3p9d_C 157 ASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPK--- 233 (590)
T ss_dssp TTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTT---
T ss_pred HHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCC---
Confidence 999999999999999999999999998641 22 27999999999999999999999999998874
Q ss_pred CCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCC
Q 009216 231 QPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD 310 (540)
Q Consensus 231 ~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~ 310 (540)
||++++||+|++++++|++++++.+++|.+++++++.++++.|+++++++++++++.|++|||++++|++.+++||.++|
T Consensus 234 m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~ 313 (590)
T 3p9d_C 234 MSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG 313 (590)
T ss_dssp SCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT
T ss_pred CcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEecCChHHHHHHHHHhCCeecccccCCCCCCccc-ceeEEEEEECCeeEEEEEcCCCCce-----------------
Q 009216 311 IFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSGCPSGRT----------------- 372 (540)
Q Consensus 311 I~~i~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~g~~~~~~----------------- 372 (540)
|++++++++.+|+|||++|||+++++++++++++||+ |+.|++.++++++|++|+||+++..
T Consensus 314 I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~ 393 (590)
T 3p9d_C 314 CSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRR 393 (590)
T ss_dssp CCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------------------
T ss_pred ceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhh
Confidence 9999999999999999999999999999999999999 9999999999999999999987776
Q ss_pred ---------------------------------------EEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecCC
Q 009216 373 ---------------------------------------ATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGG 413 (540)
Q Consensus 373 ---------------------------------------~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG 413 (540)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||
T Consensus 394 ~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGG 473 (590)
T 3p9d_C 394 WKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGG 473 (590)
T ss_dssp ----------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTT
T ss_pred hhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCcc
Confidence 99999999999999999999999999999999988999999
Q ss_pred cchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCccccc
Q 009216 414 AIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADS 493 (540)
Q Consensus 414 ~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d~ 493 (540)
++|++++.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. ++ .++|||+.+|++.||
T Consensus 474 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~-~~~G~d~~~g~~~dm 550 (590)
T 3p9d_C 474 ATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQ--GN-FTTGIDGDKGKIVDM 550 (590)
T ss_dssp HHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTT--SC-TTCBCCTTSSSCBCT
T ss_pred HHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CC-CCEeEeCCCCeEeeh
Confidence 999999999999998899999999999999999999999999999999999999999876 66 789999999999999
Q ss_pred ccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 009216 494 FANFVWEPAVVKINAINAATEAACLILSVDETVKNPKR 531 (540)
Q Consensus 494 ~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~ 531 (540)
++.|||||+.||+++|++|+|+|++|||||++|...+.
T Consensus 551 ~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 551 VSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp TTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999986653
No 13
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.8e-112 Score=909.79 Aligned_cols=506 Identities=30% Similarity=0.503 Sum_probs=485.7
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009216 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (540)
Q Consensus 16 ~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GD 95 (540)
+++.+|.+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCCcch
Q 009216 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (540)
Q Consensus 96 Gttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 175 (540)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++... .+++.|.++|+|+++||+++.+.
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~--~~~~~l~~vA~tsl~sK~i~~~~ 160 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM--KNTEPLIQTAKTTLGSKVVNSCH 160 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc--cCHHHHHHHHHHHhcccchhHHH
Confidence 9999999999999999999999999999999999999999999999999886521 12689999999999999998899
Q ss_pred HHHHHHHHHHHhhcCCC---C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeeccccccc
Q 009216 176 EFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKS 251 (540)
Q Consensus 176 ~~ls~li~~Ai~~~~~~---~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~ 251 (540)
++|+++++||+..+.+. + |.++|+|+++.|++++||++++|++|+++|.|||| |+..+||+|+++++++++.+
T Consensus 161 ~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m---~~~~~~~kIall~~~le~~k 237 (515)
T 3iyg_E 161 RQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQM---PKQVEDAKIAILTCPFEPPK 237 (515)
T ss_pred HHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccc---cccCCCceEEEEcCcccccc
Confidence 99999999999998753 2 67899999999999999999999999999999985 78999999999999999999
Q ss_pred ccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCC
Q 009216 252 EKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (540)
Q Consensus 252 ~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa 331 (540)
++.++++.+++++++.++.++|+++++++++++++.|++|||++++|++.+++||.++||++++++++++|+|||++|||
T Consensus 238 ~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa 317 (515)
T 3iyg_E 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGG 317 (515)
T ss_pred ccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccccCCCCCCcccceeEEEEEECC--eeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCcee
Q 009216 332 TVQTSVNNVVDEVLGTCEHFEERQVGN--ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVV 409 (540)
Q Consensus 332 ~ii~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vv 409 (540)
+++++++++++++||+|+.|++.++|+ ++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|
T Consensus 318 ~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 318 RIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 999999999999999999999999997 899999999999999999999999999999999999999999999999999
Q ss_pred ecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCc
Q 009216 410 AGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGG 489 (540)
Q Consensus 410 pGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~ 489 (540)
||||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|... ++ .++|||..+|+
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~-~~-~~~G~d~~~g~ 475 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKE-VN-PALGIDCLHKG 475 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc-CC-CeeeEecCCCc
Confidence 99999999999999999988899999999999999999999999999999999999999998641 23 68999999999
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcC
Q 009216 490 IADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 528 (540)
Q Consensus 490 ~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~ 528 (540)
+.||++.|||||+.||+++|++|+|+|++|||||++|+.
T Consensus 476 ~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 476 TNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred ccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 999999999999999999999999999999999999975
No 14
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-112 Score=911.72 Aligned_cols=501 Identities=27% Similarity=0.469 Sum_probs=483.8
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009216 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (540)
Q Consensus 16 ~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GD 95 (540)
.+..+|.+++.+||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GD 82 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGD 82 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCCcch
Q 009216 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (540)
Q Consensus 96 Gttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 175 (540)
||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++. + ++.|.++++|+++||+.+.+.
T Consensus 83 GTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~----~~~L~~va~tsl~sKi~~~~~ 157 (517)
T 3iyg_Z 83 GTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM-D----RETLIDVARTSLRTKVHAELA 157 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC-C----HHHHHHHHHHHhccccchhHH
Confidence 99999999999999999999999999999999999999999999999998875 3 689999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCC---CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecccccccc
Q 009216 176 EFFASMVVDAVGAIGDGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSE 252 (540)
Q Consensus 176 ~~ls~li~~Ai~~~~~~~---d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~~ 252 (540)
++|+++++||+..+.++. |.++|+|+++.|++.+||++++|++|++++.||+ ||++++||+|++++++|+++++
T Consensus 158 d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~---m~~~ien~kIll~~~~le~~k~ 234 (517)
T 3iyg_Z 158 DVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPD---MKKRVEDAYILTCNVSLEYEKT 234 (517)
T ss_pred HHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCC---ccccccCCeEEEeccccccccc
Confidence 999999999999887542 7889999999999999999999999999999997 5899999999999999999999
Q ss_pred cccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCe---------EEEecCcccHHHHHHHHhCCceeEecCChHHHH
Q 009216 253 KENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAK---------VVLSRLAIGDLATQYFADRDIFCAGRVAEEDLL 323 (540)
Q Consensus 253 ~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~---------lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le 323 (540)
+.++++.++++++++++.++|+++++..+++|...+++ |||++++|++.+++||.++||++++++++++|+
T Consensus 235 e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~le 314 (517)
T 3iyg_Z 235 EVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNME 314 (517)
T ss_pred ccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHH
Confidence 99999999999999999999999999999999988877 589999999999999999999999999999999
Q ss_pred HHHHHhCCeecccccCCCCCC-cccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHH
Q 009216 324 RVAAATGGTVQTSVNNVVDEV-LGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRA 402 (540)
Q Consensus 324 ~ia~~tGa~ii~~l~~l~~~~-lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~ 402 (540)
|||++|||+++++++++++++ ||+|+ |++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|++
T Consensus 315 ria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~a 393 (517)
T 3iyg_Z 315 RLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNA 393 (517)
T ss_pred HHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 99999 9999999999999999999999999999999999999999999999999999
Q ss_pred HhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCee
Q 009216 403 TKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYG 482 (540)
Q Consensus 403 l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G 482 (540)
+++|++|||||++|++++++|++++.+.++++|+++++|++||+.+|++|++|||+|+.+++.+|++.|.. ++ .++|
T Consensus 394 v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G 470 (517)
T 3iyg_Z 394 IDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE--SG-QLVG 470 (517)
T ss_pred HhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CC-CcEE
Confidence 99999999999999999999999998889999999999999999999999999999999999999999876 55 7899
Q ss_pred eecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcC
Q 009216 483 VDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 528 (540)
Q Consensus 483 ~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~ 528 (540)
||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..
T Consensus 471 ~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 471 VDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred EeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999975
No 15
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=7.7e-114 Score=925.62 Aligned_cols=509 Identities=31% Similarity=0.519 Sum_probs=492.4
Q ss_pred ccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhccc
Q 009216 12 LKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDS 91 (540)
Q Consensus 12 ~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~ 91 (540)
++.+.++.+|.+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+++|++++|++|++
T Consensus 8 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~ 87 (528)
T 3p9d_D 8 NATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDS 87 (528)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhh
Confidence 56677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcC
Q 009216 92 EVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLI 171 (540)
Q Consensus 92 ~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~ 171 (540)
++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+|+++||++
T Consensus 88 e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~e~l~~va~tsl~sK~~ 163 (528)
T 3p9d_D 88 EAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSD----REQLVRAASTSLSSKIV 163 (528)
T ss_dssp HTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCC----HHHHHHHHHHHSCSSSC
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCC----HHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999988655 68999999999999999
Q ss_pred CcchHHHHHHHHHHHhhcCCC---C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeeccc
Q 009216 172 GGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (540)
Q Consensus 172 ~~~~~~ls~li~~Ai~~~~~~---~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~L 247 (540)
++|+++|++|++||+.++++. . |.++|+|+++.|++++||++++|++|+++|.||+| ||++++||||++++++|
T Consensus 164 ~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~--m~~~ien~kIll~~~~l 241 (528)
T 3p9d_D 164 SQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAG--GPTRKEKAKIGLIQFQI 241 (528)
T ss_dssp STTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSS--CCSEESSEEEEEECCCS
T ss_pred chhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCccc--CcccccCceEEEEeccc
Confidence 999999999999999999862 2 67899999999999999999999999999999985 79999999999999999
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcc-----cHHHHHHHHhCCceeEecCChHHH
Q 009216 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAI-----GDLATQYFADRDIFCAGRVAEEDL 322 (540)
Q Consensus 248 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i-----~~~a~~~l~~~~I~~i~~v~~~~l 322 (540)
++++++.++++.++++++++++.++|+++++++++++.+.|++|||++++| ++.+++||.++||++++++++++|
T Consensus 242 e~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~l 321 (528)
T 3p9d_D 242 SPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEI 321 (528)
T ss_dssp SCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHH
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCC--C-CceEEEEeecCCHHHHHHHHHHHHHHHHHH
Q 009216 323 LRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP--S-GRTATIVLRGGADQFIEEAERSLHDAIMIV 399 (540)
Q Consensus 323 e~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~--~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~ 399 (540)
+|||++|||+++++++++++++||+|+.|++.++++++|++|+||+ + +..|||+|||+|+.+++|.||+++|||+++
T Consensus 322 e~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~ 401 (528)
T 3p9d_D 322 EFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVI 401 (528)
T ss_dssp HHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998 6 889999999999999999999999999999
Q ss_pred HHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCC
Q 009216 400 RRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGA 479 (540)
Q Consensus 400 ~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~ 479 (540)
|+++++|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.+ ++ .
T Consensus 402 r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~-~ 478 (528)
T 3p9d_D 402 RCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHEN--GE-L 478 (528)
T ss_dssp HHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS--SS-C
T ss_pred HHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--cC-C
Confidence 99999999999999999999999999888889999999999999999999999999999999999999999876 66 7
Q ss_pred CeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 009216 480 PYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (540)
Q Consensus 480 ~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~ 529 (540)
++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+.+
T Consensus 479 ~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 479 NDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp CCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred ccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 89999999999999999999999999999999999999999999999753
No 16
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4e-112 Score=911.24 Aligned_cols=503 Identities=35% Similarity=0.578 Sum_probs=485.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccccCC
Q 009216 16 TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGD 95 (540)
Q Consensus 16 ~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GD 95 (540)
.++.+|.+++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|++|++++||
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCCcch
Q 009216 96 GTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEK 175 (540)
Q Consensus 96 Gttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~~~~ 175 (540)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+ ++.|.++|+|+++||+.+.|+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~----~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSD----RETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCC----hHHHHHHhHhhhccccchhhH
Confidence 9999999999999999999999999999999999999999999999999987654 689999999999999999999
Q ss_pred HHHHHHHHHHHhhcCC---CC--CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecccccc
Q 009216 176 EFFASMVVDAVGAIGD---GD--RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELK 250 (540)
Q Consensus 176 ~~ls~li~~Ai~~~~~---~~--d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~ 250 (540)
++|++|++||+.++++ +. |.++|+|+++.|++.+||++++|++|+++|.| + ||+.++||||++++++|+++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~---mp~~i~n~kIlll~~~Le~~ 235 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-S---GITRVEKAKIGLIQFCLSAP 235 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-C---CCccccCceEEEEEeecccc
Confidence 9999999999999985 22 67889999999999999999999999999987 3 68999999999999999999
Q ss_pred cccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEe-----cCcccHHHHHHHHhCCceeEecCChHHHHHH
Q 009216 251 SEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLS-----RLAIGDLATQYFADRDIFCAGRVAEEDLLRV 325 (540)
Q Consensus 251 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~-----~~~i~~~a~~~l~~~~I~~i~~v~~~~le~i 325 (540)
+++.++++.++++++++++.++|+++++++++++.+.|++|||+ +++|++.+++||.++||++++++++.+|+||
T Consensus 236 k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~i 315 (518)
T 3iyg_D 236 KTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFI 315 (518)
T ss_pred ccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHhCCeecccccCCCCCCcccceeEEEEEECC-eeEEEEEcCCC-CceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 009216 326 AAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN-ERFNIFSGCPS-GRTATIVLRGGADQFIEEAERSLHDAIMIVRRAT 403 (540)
Q Consensus 326 a~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~-~~~~~~~g~~~-~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l 403 (540)
|++|||+++++++++++++||+|+.|++.++++ ++|++|+||++ +..|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 316 a~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (518)
T 3iyg_D 316 CKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLV 395 (518)
T ss_pred HHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 89999999988 8999999999999999999999999999999999
Q ss_pred hCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeee
Q 009216 404 KNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGV 483 (540)
Q Consensus 404 ~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~ 483 (540)
++|++|||||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|.. ++ .++||
T Consensus 396 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~ 472 (518)
T 3iyg_D 396 KKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQ--GE-KTTGI 472 (518)
T ss_pred hCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--cC-CceeE
Confidence 9999999999999999999999998899999999999999999999999999999999999999999976 65 78999
Q ss_pred ecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCC
Q 009216 484 DINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNP 529 (540)
Q Consensus 484 d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~ 529 (540)
|+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|+.+
T Consensus 473 d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 473 NVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred eCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 9999999999999999999999999999999999999999999753
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=8.2e-113 Score=923.02 Aligned_cols=520 Identities=32% Similarity=0.510 Sum_probs=489.6
Q ss_pred hhHhhcccc--ccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHH
Q 009216 7 PQIILLKEG--TDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVD 84 (540)
Q Consensus 7 ~~~~~~~~~--~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~ 84 (540)
+|+.+|+++ .++.+|.+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||+++
T Consensus 27 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 106 (562)
T 3p9d_E 27 RPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQ 106 (562)
T ss_dssp ---CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHH
Confidence 355566666 377899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHH
Q 009216 85 IAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAAT 164 (540)
Q Consensus 85 ~~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~t 164 (540)
+|++|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++..+...+++.|.++|+|
T Consensus 107 ~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~t 186 (562)
T 3p9d_E 107 LSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKT 186 (562)
T ss_dssp HHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHH
T ss_pred HHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998764211124789999999
Q ss_pred hhccCcCCcchHHHHHHHHHHHhhcCCC---C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccc-----
Q 009216 165 TLSSKLIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKF----- 235 (540)
Q Consensus 165 sl~sk~~~~~~~~ls~li~~Ai~~~~~~---~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~----- 235 (540)
+++||+++.+.++|+++++||+..+.+. + |.++|+|+++.|++++||++++|++|+++|.||+| |+..
T Consensus 187 Sl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m---~~~~~~~~~ 263 (562)
T 3p9d_E 187 SLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQM---PKCVLPKEG 263 (562)
T ss_dssp HHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSC---CC-----TT
T ss_pred hcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCc---Ccccccccc
Confidence 9999999999999999999999998763 2 78999999999999999999999999999999986 6666
Q ss_pred -cCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeE
Q 009216 236 -LNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCA 314 (540)
Q Consensus 236 -~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i 314 (540)
++++|++++++|++.+++.++++.++++++++++.+.|+++++++++++++.|++|||++++|++.+++||.++||+++
T Consensus 264 ~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v 343 (562)
T 3p9d_E 264 SDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAV 343 (562)
T ss_dssp CSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCE
T ss_pred cccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCChHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECC--eeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHH
Q 009216 315 GRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGN--ERFNIFSGCPSGRTATIVLRGGADQFIEEAERSL 392 (540)
Q Consensus 315 ~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i 392 (540)
+++++++|+|||++|||+++++++++++++||+|+.|++.++|+ ++|++|+||++++.|||+|||+|+.+++|.||++
T Consensus 344 ~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i 423 (562)
T 3p9d_E 344 RWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERAL 423 (562)
T ss_dssp ECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHH
T ss_pred eccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHcc
Q 009216 393 HDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHA 472 (540)
Q Consensus 393 ~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~ 472 (540)
+|||+++|+++++|++|||||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.
T Consensus 424 ~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~ 503 (562)
T 3p9d_E 424 HDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQL 503 (562)
T ss_dssp HHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999999886
Q ss_pred CCCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCC
Q 009216 473 LPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKR 531 (540)
Q Consensus 473 ~~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~ 531 (540)
.. ++ .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..++.
T Consensus 504 ~~-~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 504 KE-KI-SNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp HT-TT-SSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred hc-CC-CceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 41 23 78999999999999999999999999999999999999999999999987654
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.7e-113 Score=920.54 Aligned_cols=519 Identities=36% Similarity=0.554 Sum_probs=492.6
Q ss_pred HhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeC-CCCCeEEecCHHHHhhhccccChHHHHHHHHHh
Q 009216 9 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHD-DKGTVTISNDGATIMKLLDIVHPAAKILVDIAK 87 (540)
Q Consensus 9 ~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~-~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~ 87 (540)
+.+|+++.++.+|.+++.+|+.||.+|+++|+|||||+||+|||++ +.|+++|||||+|||++|+++||+|||++++|+
T Consensus 3 ~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~ 82 (527)
T 3p9d_B 3 VQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISK 82 (527)
T ss_dssp CCSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred eehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred hcccccCCChHHHHHHHHHHHHHHHHHHhC-CCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhh
Q 009216 88 SQDSEVGDGTTTVVLLAAEFLREAKPFIED-GVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTL 166 (540)
Q Consensus 88 ~~~~~~GDGttt~vlLa~~Ll~~~~~li~~-gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl 166 (540)
+|++++||||||++|||++||+++.+++++ |+||+.|++||++|++.++++|++++++++.+ ++.+++.|.++|+||+
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~~~~~~~l~~vA~tSl 161 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHD-KTMFREDLIHIAKTTL 161 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCC-HHHHHHHHHHHHHHHH
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCc-chhhHHHHHHHHHhcc
Confidence 999999999999999999999999999999 99999999999999999999999999988753 2234689999999999
Q ss_pred ccCcCCcchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecc
Q 009216 167 SSKLIGGEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIE 246 (540)
Q Consensus 167 ~sk~~~~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~ 246 (540)
+||+.+.++++|++|++||+.+++++.|.++|+|+++.|++++||++++|++|+++|.||+ |++++||+|++++++
T Consensus 162 ~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~----p~~~~n~kIlll~~~ 237 (527)
T 3p9d_B 162 SSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ----PKRIENAKILIANTT 237 (527)
T ss_dssp TTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC----CSCCSSCEEEEECSC
T ss_pred ccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCC----CeeeecceEEEeccc
Confidence 9999999999999999999999987546779999999999999999999999999999986 688999999999999
Q ss_pred ccccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHH
Q 009216 247 LELKSEK-ENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRV 325 (540)
Q Consensus 247 Le~~~~~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~i 325 (540)
|++++++ +++++.+++++++.++.+.|++++++++++|++.|++||+++++|++.+++||.++||++++++++.+|+||
T Consensus 238 le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~i 317 (527)
T 3p9d_B 238 LDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERL 317 (527)
T ss_dssp SSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHH
T ss_pred cccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHH
Confidence 9999998 589999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 009216 326 AAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKN 405 (540)
Q Consensus 326 a~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~ 405 (540)
+++|||+++++++++++++||+|+.|++.++++++|++|+||+++.+|||+|||+|+.+++|.||+++|||+++|+++++
T Consensus 318 a~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 318 ALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp HHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred HHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeec
Q 009216 406 STVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDI 485 (540)
Q Consensus 406 g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~ 485 (540)
|++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. |+ .++|||+
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~--~~-~~~G~d~ 474 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYN--GI-STSGLDL 474 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHH--TC-SCCCCCS
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc--CC-CceeEEC
Confidence 99999999999999999999998889999999999999999999999999999999999999999876 66 7899999
Q ss_pred CCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCC
Q 009216 486 NTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGIR 535 (540)
Q Consensus 486 ~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~~ 535 (540)
.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...|.++.+
T Consensus 475 ~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 475 NNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp SSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred CCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999999999999999999999999999999988776544
No 19
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=8.1e-113 Score=924.13 Aligned_cols=520 Identities=27% Similarity=0.445 Sum_probs=478.7
Q ss_pred hhHhhccccccccch-hHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHH
Q 009216 7 PQIILLKEGTDTSQG-KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDI 85 (540)
Q Consensus 7 ~~~~~~~~~~~~~~g-~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~ 85 (540)
|...+|++++++++| .+++.+|+.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++
T Consensus 9 ~~~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~ 88 (568)
T 3p9d_H 9 PNAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMA 88 (568)
T ss_dssp CCCSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHH
T ss_pred chhhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHH
Confidence 568889999999998 5699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccc--cCCChHHHHHHHHHHHH
Q 009216 86 AKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSI--EGQSLEEKKRLLSKCAA 163 (540)
Q Consensus 86 ~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i--~~~~~~~~~~~l~~ia~ 163 (540)
|++|++++||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++++ +..+ ++.|.++++
T Consensus 89 a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~----~~~l~~va~ 164 (568)
T 3p9d_H 89 TEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKND----KNELLKMIK 164 (568)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCT----THHHHHHHH
T ss_pred HHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCC----HHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876 2233 589999999
Q ss_pred HhhccCcCCcchHHHHHHHHHHHhhcCCC--------C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCcc
Q 009216 164 TTLSSKLIGGEKEFFASMVVDAVGAIGDG--------D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKK 234 (540)
Q Consensus 164 tsl~sk~~~~~~~~ls~li~~Ai~~~~~~--------~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~ 234 (540)
|+++||+.+++ ++|++|++||+.+++++ + |.++|+|+++.|++++||++++|++|++++. .||++
T Consensus 165 tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~-----~m~~~ 238 (568)
T 3p9d_H 165 PVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE-----GHVKS 238 (568)
T ss_dssp HHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS-----SGGGS
T ss_pred HHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc-----CCcEE
Confidence 99999998877 99999999999999763 2 5778999999999999999999999999984 46899
Q ss_pred cc---CceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCc
Q 009216 235 FL---NPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDI 311 (540)
Q Consensus 235 ~~---n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I 311 (540)
++ ||||++++++|++++++.++++.+++++++.++.++|++++++++++|++.|++|||++++|++.+++||.++||
T Consensus 239 i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI 318 (568)
T 3p9d_H 239 LSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGI 318 (568)
T ss_dssp CCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTC
T ss_pred EecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCe
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEecCChHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCC--CCceEEEEeecCCHHHHHHHH
Q 009216 312 FCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP--SGRTATIVLRGGADQFIEEAE 389 (540)
Q Consensus 312 ~~i~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~--~~~~~TIll~G~t~~~l~e~~ 389 (540)
++++++++.+|+|||++|||+++++++++++++||+|+.|++.++|+++|++|+||+ ++..|||+|||+|+.+++|.|
T Consensus 319 ~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~e 398 (568)
T 3p9d_H 319 LVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIE 398 (568)
T ss_dssp EEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998 689999999999999999999
Q ss_pred HHHHHHHHHHHHHHh--CCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHH
Q 009216 390 RSLHDAIMIVRRATK--NSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKL 467 (540)
Q Consensus 390 ~~i~dal~~~~~~l~--~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l 467 (540)
|+++|||+++|++++ ++++|||||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|
T Consensus 399 r~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l 478 (568)
T 3p9d_H 399 RAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNL 478 (568)
T ss_dssp HHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCC------CCCCCCeeeecCCCc---ccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCCCc
Q 009216 468 RQKHALP------TGEGAPYGVDINTGG---IADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGIRER 537 (540)
Q Consensus 468 ~~~h~~~------~~~~~~~G~d~~~~~---~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~~~~ 537 (540)
+..|... .++ .++|||+.+|+ +.||++.|||||+.||+++|++|+|+|++|||||++|...|..++++|
T Consensus 479 ~~~h~~~~~~~~~~~~-~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~ 556 (568)
T 3p9d_H 479 YAAHNVTEPGAVKTDH-LYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAP 556 (568)
T ss_dssp HHCCCCSSCCCCCCTT-SSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC------------------
T ss_pred HHHhhhhcccccccCC-CceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCC
Confidence 9988541 133 68999999997 999999999999999999999999999999999999999887766654
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-110 Score=894.64 Aligned_cols=502 Identities=27% Similarity=0.439 Sum_probs=479.9
Q ss_pred ccccccch-hHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccc
Q 009216 14 EGTDTSQG-KAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSE 92 (540)
Q Consensus 14 ~~~~~~~g-~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 92 (540)
+++++.+| .+++.+|+.||++|+++|+|||||+||+|||+++.|+|+|||||+|||++|+++||+|||++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46788899 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcc--cccCCChHHHHHHHHHHHHHhhccCc
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAK--SIEGQSLEEKKRLLSKCAATTLSSKL 170 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~--~i~~~~~~~~~~~l~~ia~tsl~sk~ 170 (540)
+||||||++||+++||+++.+++++|+||+.|++||++|++.++++|+++++ +.+..+ ++.|.++++|+++||+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~----~~~l~~va~tsl~sK~ 156 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRD----VDEVSSLLHTSVMSKQ 156 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCC----HHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999854 333334 6899999999999998
Q ss_pred CCcchHHHHHHHHHHHhhcCCCC---CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeeccc
Q 009216 171 IGGEKEFFASMVVDAVGAIGDGD---RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIEL 247 (540)
Q Consensus 171 ~~~~~~~ls~li~~Ai~~~~~~~---d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~L 247 (540)
.+ ++++|++|++||+.++++++ +.++|+|.++.|+++.||++++|++|+++|.+ ||+..+||+|+++++|+
T Consensus 157 ~~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-----~~~~~~n~kI~ll~~~l 230 (512)
T 3iyg_Q 157 YG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-----DVTSVKDAKIAVYSCPF 230 (512)
T ss_pred cc-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-----CCcccccCceEEEeccc
Confidence 65 68999999999999998752 67889999999999999999999999999864 58999999999999999
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHH
Q 009216 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAA 327 (540)
Q Consensus 248 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~ 327 (540)
++.+++.++++.+++++++.++.+.|+++++++++++++.|++||+++++|++++++||+++||++++++++.+|+|||+
T Consensus 231 e~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~ 310 (512)
T 3iyg_Q 231 DGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCK 310 (512)
T ss_pred ccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCC-CCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 009216 328 ATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCP-SGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNS 406 (540)
Q Consensus 328 ~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~-~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g 406 (540)
+|||+++++++++++++||+|+.|++.++|+++|++|++|+ .+.+|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 311 ~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~ 390 (512)
T 3iyg_Q 311 TVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDK 390 (512)
T ss_pred HhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999996 47899999999999999999999999999999999999
Q ss_pred ceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecC
Q 009216 407 TVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDIN 486 (540)
Q Consensus 407 ~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~ 486 (540)
++|||||++|++++++|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|.. ++ .++|||..
T Consensus 391 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~ 467 (512)
T 3iyg_Q 391 RLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQE--GN-KNVGLDIE 467 (512)
T ss_pred CEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc--CC-CcEEEecC
Confidence 9999999999999999999998899999999999999999999999999999999999999999976 66 78999999
Q ss_pred CC--cccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcC
Q 009216 487 TG--GIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKN 528 (540)
Q Consensus 487 ~~--~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~ 528 (540)
+| ++.||++.|||||+.||+++|++|+|+|++|||||++|+.
T Consensus 468 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 468 AEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred CCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 65 9999999999999999999999999999999999999974
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=5e-112 Score=915.96 Aligned_cols=519 Identities=27% Similarity=0.448 Sum_probs=491.3
Q ss_pred HhhccccccccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhh
Q 009216 9 IILLKEGTDTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKS 88 (540)
Q Consensus 9 ~~~~~~~~~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~ 88 (540)
+.++++++++.+|.+++.+||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++
T Consensus 3 ~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~ 82 (546)
T 3p9d_F 3 LQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAA 82 (546)
T ss_dssp CCSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHH
T ss_pred ccccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHH
Confidence 34678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccC--CChHHHHHHHHHHHHHhh
Q 009216 89 QDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEG--QSLEEKKRLLSKCAATTL 166 (540)
Q Consensus 89 ~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~--~~~~~~~~~l~~ia~tsl 166 (540)
|++++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. .+ ++.|.++++|++
T Consensus 83 qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~----~~~L~~vA~tsl 158 (546)
T 3p9d_F 83 QDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSND----REFLLQVARSSL 158 (546)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTT----CHHHHHHHHHHT
T ss_pred HHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccC----HHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999998864 22 589999999999
Q ss_pred ccCcCCcchHHHHHHHHHHHhhcCCC---C-CCccceeeeecCCCcccceeEEeEEEecccCCccccCCCccccCceEEE
Q 009216 167 SSKLIGGEKEFFASMVVDAVGAIGDG---D-RLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILL 242 (540)
Q Consensus 167 ~sk~~~~~~~~ls~li~~Ai~~~~~~---~-d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill 242 (540)
+||+.+.+.++|+++++||+..+.+. + |.++|+|+++.|+..+||++++|++|++++.||+ ||++++||+|++
T Consensus 159 ~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~---m~~~~en~kIll 235 (546)
T 3p9d_F 159 LTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPD---MPTRVKNAYVLI 235 (546)
T ss_dssp CSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSS---SCSSBCSCCCCE
T ss_pred CCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEeccccccc---CcceecCceEEE
Confidence 99999899999999999999988632 2 7889999999999999999999999999999985 689999999999
Q ss_pred eecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcC----------CeEEEecCcccHHHHHHHHhCCce
Q 009216 243 LNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSG----------AKVVLSRLAIGDLATQYFADRDIF 312 (540)
Q Consensus 243 ~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~----------~~lii~~~~i~~~a~~~l~~~~I~ 312 (540)
++|+|++++++.++++.++++++++++.+.|++++++.+++|...+ ++|||++++|++.+++||.++||+
T Consensus 236 ~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~ 315 (546)
T 3p9d_F 236 LNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNIL 315 (546)
T ss_dssp ECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCE
T ss_pred ecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCe
Confidence 9999999999999999999999999999999999999999998754 239999999999999999999999
Q ss_pred eEecCChHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCceEEEEeecCCHHHHHHHHHHH
Q 009216 313 CAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGRTATIVLRGGADQFIEEAERSL 392 (540)
Q Consensus 313 ~i~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~~~TIll~G~t~~~l~e~~~~i 392 (540)
+++++++++|+|||++|||+++++++++++++||+|+.|++.++++++|++|+||++++.|||+|||+|+.+++|.||++
T Consensus 316 ~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l 395 (546)
T 3p9d_F 316 ALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAV 395 (546)
T ss_dssp EECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHH
T ss_pred eEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCceeecCCcchHHHHHHHHH---HHhhcCChHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHH
Q 009216 393 HDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQ---ESRAIAGKSQFFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQ 469 (540)
Q Consensus 393 ~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~ 469 (540)
+|||+++|+++++|++|||||++|++++.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++.+|+.
T Consensus 396 ~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 475 (546)
T 3p9d_F 396 RDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVED 475 (546)
T ss_dssp HHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999 47888999999999999999999999999999999999999999
Q ss_pred HccC---CCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchhhhhcCCCCCCCC
Q 009216 470 KHAL---PTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPKRSGIR 535 (540)
Q Consensus 470 ~h~~---~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id~~i~~~~~~~~~ 535 (540)
.|.. +++. .++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|...+..++.
T Consensus 476 ~h~~~~~~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~~ 543 (546)
T 3p9d_F 476 ELDDAQDSDET-RYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLKE 543 (546)
T ss_dssp HHHHHTTSTTS-SCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCCC
T ss_pred HhhhhhcccCC-ceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 8861 0022 679999999999999999999999999999999999999999999999987766554
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.3e-104 Score=849.50 Aligned_cols=475 Identities=34% Similarity=0.580 Sum_probs=382.8
Q ss_pred eeeCCCCCeEEecCHHHHhhhccccChHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHH
Q 009216 51 LIHDDKGTVTISNDGATIMKLLDIVHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRN 130 (540)
Q Consensus 51 ~i~~~~g~~~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~ 130 (540)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCCcchHHHHHHHHHHHhhcCCC--C----C-Cccceeeee
Q 009216 131 ASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIGGEKEFFASMVVDAVGAIGDG--D----R-LNMIGIKKV 203 (540)
Q Consensus 131 a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~~~~~~ls~li~~Ai~~~~~~--~----d-~~~I~i~~i 203 (540)
|++.++++|+++++|++..+ ++.|.++++|+|+||+.++|+++|++|++||+.+++++ . | .++|+|+++
T Consensus 81 A~~~a~~~L~~~s~~v~~~d----~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDD----EAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTC----HHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCCCc----HHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 99999999999999987655 68999999999999999999999999999999999754 1 4 678999999
Q ss_pred cCCCcccceeEEeEEEecccCCccccCCCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHH
Q 009216 204 PGGTMRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDK 283 (540)
Q Consensus 204 ~g~~~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~ 283 (540)
+|++++||++++|++|+++|.||+| |++++||||++++++|++++++.++++.++++++++++.++|++++++++++
T Consensus 157 ~G~~~~ds~lv~G~v~dk~~~~~~m---~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~ 233 (500)
T 3aq1_B 157 AGGSIDDSELIDGLVIDKERSHPNM---PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEK 233 (500)
T ss_dssp ESSCGGGCEEESEEEESCCCSSTTS---CSEEEEEEEEEESSCBCC-------------------------CHHHHHHHH
T ss_pred cCCCccceEEEeeeEEeecCCCCCC---cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999985 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEE
Q 009216 284 CVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNI 363 (540)
Q Consensus 284 i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~ 363 (540)
+++.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++
T Consensus 234 I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~ 313 (500)
T 3aq1_B 234 VIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTY 313 (500)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEE
T ss_pred HHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHHHHHHHH
Q 009216 364 FSGCPSGRTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFFINSYAK 443 (540)
Q Consensus 364 ~~g~~~~~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~~~~~a~ 443 (540)
|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++++.+|++++.+.++++|+++++|++
T Consensus 314 ~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ 393 (500)
T 3aq1_B 314 VTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAE 393 (500)
T ss_dssp EEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHH
T ss_pred EECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHHHHhchh
Q 009216 444 ALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVD 523 (540)
Q Consensus 444 aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~~iL~id 523 (540)
||+.||++|++|||+|+.+++.+|+..|.. |+ .++|+|..+|++.||++.|||||+.||+++|++|+|+|++|||||
T Consensus 394 ALe~ip~~La~NaG~d~~~~v~~l~~~h~~--~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD 470 (500)
T 3aq1_B 394 ALEVIPVALAENAGLDPIDIMVELRSQHEK--GN-KNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRID 470 (500)
T ss_dssp HTTHHHHHHHHHTTCCHHHHHHHHHHHHHT--TC-TTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhcC--CC-CCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999876 55 789999999999999999999999999999999999999999999
Q ss_pred hhhcCCCCCCCC
Q 009216 524 ETVKNPKRSGIR 535 (540)
Q Consensus 524 ~~i~~~~~~~~~ 535 (540)
++|...|.+++.
T Consensus 471 ~iI~~~~~~~~~ 482 (500)
T 3aq1_B 471 DVVASKGSANQG 482 (500)
T ss_dssp ------------
T ss_pred HHHhcCccCCCC
Confidence 999987765543
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.2e-97 Score=799.68 Aligned_cols=470 Identities=23% Similarity=0.356 Sum_probs=433.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccCh----HHHHHHHHHhhcccc
Q 009216 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (540)
Q Consensus 17 ~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~akll~~~~~~~~~~ 92 (540)
+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| +|||++++|++|+++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 4578999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCC
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (540)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ + ++.|.++++++++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~----~~~l~~vA~iS~~----- 152 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE--D----RKAIEEVATISAN----- 152 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--S----HHHHHHHHHHHHT-----
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--C----HHHHHHhhhhhcC-----
Confidence 9999999999999999999999999999999999999999999999999999986 2 5799999998853
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccc-eeEEeEEEecccCCccc----cCCCccccCceEEEeeccc
Q 009216 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (540)
Q Consensus 173 ~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~~Ill~~~~L 247 (540)
+++++++++||+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| +.|+++++||+|+++|++|
T Consensus 153 --~~~i~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I 225 (543)
T 1we3_A 153 --DPEVGKLIADAMEKVGKE---GIITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV 225 (543)
T ss_dssp --CHHHHHHHHHHHHTTCTT---SEEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCB
T ss_pred --CHHHHHHHHHHHHHhCcC---CcEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCc
Confidence 689999999999999865 445554 78999998 99999999999999998 3577889999999999974
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHh------CCceeEe-----c
Q 009216 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFAD------RDIFCAG-----R 316 (540)
Q Consensus 248 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~------~~I~~i~-----~ 316 (540)
+++++ +.++++++.+.|++|||++++|++.+++||.. .+|++++ +
T Consensus 226 -------------s~~~~-----------l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 281 (543)
T 1we3_A 226 -------------SNVRE-----------LLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGD 281 (543)
T ss_dssp -------------CCHHH-----------HHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHH
T ss_pred -------------CCHHH-----------HHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhh
Confidence 45555 45789999999999999999999999999986 5666666 8
Q ss_pred CChHHHHHHHHHhCCeeccc-----ccCCCCCCcccceeEEEEEECCeeEEEEEcCCCC---------------------
Q 009216 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (540)
Q Consensus 317 v~~~~le~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 370 (540)
+++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||+++
T Consensus 282 ~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 358 (543)
T 1we3_A 282 RRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETTDSEY 358 (543)
T ss_dssp HHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHH
T ss_pred hhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchh
Confidence 99999999999999999996 89999999999999975 57999999999753
Q ss_pred --------------ceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHH
Q 009216 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQF 436 (540)
Q Consensus 371 --------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~ 436 (540)
.+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++.+.++++|+
T Consensus 359 ~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~ 437 (543)
T 1we3_A 359 AREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEAT 437 (543)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHH
Confidence 689999999999999999999999999999999999 99999999999999999998878899999
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 009216 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAA 516 (540)
Q Consensus 437 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a 516 (540)
++++|++||+.||++|++|||+|+.+++.+|+..|. + .++|||..+|++.||++.|||||+.||+++|++|+|+|
T Consensus 438 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~----~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a 512 (543)
T 1we3_A 438 GAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK----N-PRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIG 512 (543)
T ss_dssp HHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS----C-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC----C-CCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999873 3 78999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCCCCCCCCc
Q 009216 517 CLILSVDETVKNPKRSGIRER 537 (540)
Q Consensus 517 ~~iL~id~~i~~~~~~~~~~~ 537 (540)
++||++|++|...|.+.+++|
T Consensus 513 ~~iL~id~iI~~~~~~~~~~~ 533 (543)
T 1we3_A 513 ALILTTEAVVAEKPEKKESTP 533 (543)
T ss_dssp HHHHTEEEEEEECSCC-----
T ss_pred HHHHHHHHHhhcCCccCCCCC
Confidence 999999999998877655444
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.5e-96 Score=789.97 Aligned_cols=464 Identities=21% Similarity=0.350 Sum_probs=429.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccCh----HHHHHHHHHhhcccc
Q 009216 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (540)
Q Consensus 17 ~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~akll~~~~~~~~~~ 92 (540)
+..+|.++|.+|+.||..|+++|++||||+||+|||+++.|+|+|||||+|||++|+++|| +|||++++|++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 4578999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCC
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (540)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ + ++.|.+++++++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~----~e~l~~vA~iS~------ 151 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS--D----SKAIAQVGTISA------ 151 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC--S----HHHHHHHHHHHT------
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC--C----HHHHHHHHHHhc------
Confidence 9999999999999999999999999999999999999999999999999999986 2 579999999985
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccc-eeEEeEEEecccCCccc----cCCCccccCceEEEeeccc
Q 009216 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (540)
Q Consensus 173 ~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~~Ill~~~~L 247 (540)
+++++|+++++||+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| +.|+++++||+|+++|++|
T Consensus 152 ~~~~~i~~liadAv~~V~~d---g~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~I 226 (547)
T 1kp8_A 152 NSDETVGKLIAEAMDKVGKE---GVITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKI 226 (547)
T ss_dssp TSCHHHHHHHHHHHHHHCTT---SEEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEE
T ss_pred cchhHHHHHHHHHHHHhCcC---CcEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcC
Confidence 46899999999999999865 445554 78999998 99999999999999998 3577889999999999975
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhC------CceeEe-----c
Q 009216 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADR------DIFCAG-----R 316 (540)
Q Consensus 248 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~------~I~~i~-----~ 316 (540)
+++++ +.++++++.+.|++|||++++|++.+++||.++ +|++++ +
T Consensus 227 -------------s~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 282 (547)
T 1kp8_A 227 -------------SNIRE-----------MLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGD 282 (547)
T ss_dssp -------------CCGGG-----------THHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHH
T ss_pred -------------CCHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccccc
Confidence 34445 457889999999999999999999999999874 556665 9
Q ss_pred CChHHHHHHHHHhCCeeccc-----ccCCCCCCcccceeEEEEEECCeeEEEEEcCCCC---------------------
Q 009216 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (540)
Q Consensus 317 v~~~~le~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 370 (540)
+++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||+++
T Consensus 283 ~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 359 (547)
T 1kp8_A 283 RRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY 359 (547)
T ss_dssp HHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHH
T ss_pred ccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchh
Confidence 99999999999999999996 99999999999999976 57999999999764
Q ss_pred --------------ceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHH
Q 009216 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQF 436 (540)
Q Consensus 371 --------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~ 436 (540)
.+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++. .++++|+
T Consensus 360 ~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~ 437 (547)
T 1kp8_A 360 DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNV 437 (547)
T ss_dssp HHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHH
T ss_pred hHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHH
Confidence 689999999999999999999999999999999999 999999999999999998765 7889999
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 009216 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAA 516 (540)
Q Consensus 437 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a 516 (540)
++++|++||+.||++|++|||+|+.+++.+|++. + .++|||..+|++.||++.|||||+.||+++|++|+|+|
T Consensus 438 ~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~------~-~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A 510 (547)
T 1kp8_A 438 GIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG------D-GNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVA 510 (547)
T ss_dssp HHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS------C-TTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc------C-CCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999863 2 67999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCCCCC
Q 009216 517 CLILSVDETVKNPKRSG 533 (540)
Q Consensus 517 ~~iL~id~~i~~~~~~~ 533 (540)
++||++|++|...|.+.
T Consensus 511 ~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 511 GLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHTEEEEEEECCC--
T ss_pred HHHHhHhheeecCCccC
Confidence 99999999999877543
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.2e-97 Score=799.19 Aligned_cols=465 Identities=23% Similarity=0.349 Sum_probs=401.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccCh----HHHHHHHHHhhcccc
Q 009216 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHP----AAKILVDIAKSQDSE 92 (540)
Q Consensus 17 ~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP----~akll~~~~~~~~~~ 92 (540)
+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| +|||++++|++|+++
T Consensus 5 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 84 (545)
T 1iok_A 5 EVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDE 84 (545)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGG
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccc
Confidence 4678999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCC
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (540)
+||||||++||+++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. ++.|.+++++++
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~------~e~l~~va~iS~------ 152 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVND------SSEVAQVGTISA------ 152 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCS------TTTTTHHHHHTT------
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC------HHHHHHHHHhhc------
Confidence 99999999999999999999999999999999999999999999999999999863 358999999885
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccc-eeEEeEEEecccCCccc----cCCCccccCceEEEeeccc
Q 009216 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDS-FLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIEL 247 (540)
Q Consensus 173 ~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds-~li~Givl~~~~~~~~~----~~~~~~~~n~~Ill~~~~L 247 (540)
+++++|+++++||+.+++++ +.|.|. +|++++|| ++++|++|+++|.|||| +.|+++++||+|+++|++|
T Consensus 153 ~~~~~i~~li~dAv~~V~~~---g~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I 227 (545)
T 1iok_A 153 NGESFIGQQIAEAMQRVGNE---GVITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKL 227 (545)
T ss_dssp TTCHHHHHHHHHHHHHHCTT---SCCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCB
T ss_pred CCchhHHHHHHHHHHHhccC---CeEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCc
Confidence 46899999999999999865 446664 79999998 99999999999999998 3577889999999999986
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCC------ceeEe-----c
Q 009216 248 ELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD------IFCAG-----R 316 (540)
Q Consensus 248 e~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~------I~~i~-----~ 316 (540)
+ ++++ +.++++++.+.|++|||++++|++.+++||.+++ |++++ +
T Consensus 228 ~-------------~~~~-----------l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~ 283 (545)
T 1iok_A 228 S-------------SLQP-----------MVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGD 283 (545)
T ss_dssp C-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTT
T ss_pred C-------------CHHH-----------HHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhh
Confidence 4 3333 3577888999999999999999999999999754 55555 9
Q ss_pred CChHHHHHHHHHhCCeeccc-----ccCCCCCCcccceeEEEEEECCeeEEEEEcCCCC---------------------
Q 009216 317 VAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG--------------------- 370 (540)
Q Consensus 317 v~~~~le~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~--------------------- 370 (540)
+++++|+|||++|||+++++ ++++++++||+|+.|++ +++++++|+||+++
T Consensus 284 ~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~ 360 (545)
T 1iok_A 284 RRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDY 360 (545)
T ss_dssp HHHHHHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSS
T ss_pred ccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchh
Confidence 99999999999999999996 99999999999999986 57999999999754
Q ss_pred --------------ceEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHH
Q 009216 371 --------------RTATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQF 436 (540)
Q Consensus 371 --------------~~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~ 436 (540)
.+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++. .++++|+
T Consensus 361 ~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~ 438 (545)
T 1iok_A 361 DREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDA 438 (545)
T ss_dssp HHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHH
T ss_pred hHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHH
Confidence 689999999999999999999999999999999999 999999999999999998766 7889999
Q ss_pred HHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHH
Q 009216 437 FINSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAA 516 (540)
Q Consensus 437 ~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a 516 (540)
++++|++||+.||++|++|||+|+.+++.+|++.| . .++|||..+|++.||++.|||||+.||+++|++|+|+|
T Consensus 439 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~-~-----~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A 512 (545)
T 1iok_A 439 GIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS-D-----KAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVA 512 (545)
T ss_dssp HHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC-S-----TTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-C-----CCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999765 2 67999999999999999999999999999999999999
Q ss_pred HHHhchhhhhcCCCCCC
Q 009216 517 CLILSVDETVKNPKRSG 533 (540)
Q Consensus 517 ~~iL~id~~i~~~~~~~ 533 (540)
++||++|++|...|.+.
T Consensus 513 ~~iL~id~iI~~~~~~~ 529 (545)
T 1iok_A 513 GLLITTEAMIAEKPEPK 529 (545)
T ss_dssp HHHHTEEEEEEECC---
T ss_pred HHHHhHHHhhccCCccC
Confidence 99999999999877543
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=7.5e-97 Score=789.96 Aligned_cols=466 Identities=24% Similarity=0.342 Sum_probs=353.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhhcCCCCCcceeeeCCCCCeEEecCHHHHhhhccccChH----HHHHHHHHhhcccc
Q 009216 17 DTSQGKAQLVSNINACTAVADVVRSTLGPRGMDKLIHDDKGTVTISNDGATIMKLLDIVHPA----AKILVDIAKSQDSE 92 (540)
Q Consensus 17 ~~~~g~~~~~~n~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~~~~~~~~ 92 (540)
+..+|.++|.+|+.||.+|+++|++||||+||+|||+++.|+|+|||||+|||++|+++||+ |||++++|++|+++
T Consensus 4 ~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e 83 (546)
T 3rtk_A 4 TIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDV 83 (546)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC--
T ss_pred eeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhh
Confidence 35789999999999999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred cCCChHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHHHHHHHHHHHHhhcccccCCChHHHHHHHHHHHHHhhccCcCC
Q 009216 93 VGDGTTTVVLLAAEFLREAKPFIEDGVHPQNLIRSFRNASYKAIQKVKELAKSIEGQSLEEKKRLLSKCAATTLSSKLIG 172 (540)
Q Consensus 93 ~GDGttt~vlLa~~Ll~~~~~li~~gi~p~~i~~g~~~a~~~~~~~L~~~s~~i~~~~~~~~~~~l~~ia~tsl~sk~~~ 172 (540)
+||||||++|||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ + ++.|.++++++++
T Consensus 84 ~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~--~----~e~L~~vA~iS~~----- 152 (546)
T 3rtk_A 84 AGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE--T----KEQIAATAAISAG----- 152 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--S----HHHHHHHHHHHHT-----
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--C----hHHHHhHeEEeCC-----
Confidence 9999999999999999999999999999999999999999999999999999987 3 5789999998863
Q ss_pred cchHHHHHHHHHHHhhcCCCCCCccceeeeecCCCcccceeEEeEEEecccCCccc----cCCCccccCceEEEeecccc
Q 009216 173 GEKEFFASMVVDAVGAIGDGDRLNMIGIKKVPGGTMRDSFLVNGVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELE 248 (540)
Q Consensus 173 ~~~~~ls~li~~Ai~~~~~~~d~~~I~i~~i~g~~~~ds~li~Givl~~~~~~~~~----~~~~~~~~n~~Ill~~~~Le 248 (540)
+++++++++||+.+++++ +.|.|.+.. +...||++++|++|+++|.|||| +.|+++++||+|+++|++|
T Consensus 153 --~~~i~~liadAv~~V~~d---gvI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kI- 225 (546)
T 3rtk_A 153 --DQSIGDLIAEAMDKVGNE---GVITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKV- 225 (546)
T ss_dssp --CHHHHHHHHHHHHHSCTT---SEEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEE-
T ss_pred --chHHHHHHHHHHHHhccC---CceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCcc-
Confidence 678999999999999875 445555322 34468999999999999999998 3688999999999999874
Q ss_pred cccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHhCC------ceeE-----ecC
Q 009216 249 LKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVLSRLAIGDLATQYFADRD------IFCA-----GRV 317 (540)
Q Consensus 249 ~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~------I~~i-----~~v 317 (540)
+++++ +.++++++.+.|++|||++++|++.++++|..++ +.++ ++.
T Consensus 226 ------------s~~~~-----------l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~ 282 (546)
T 3rtk_A 226 ------------STVKD-----------LLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDR 282 (546)
T ss_dssp ------------CCSTT-----------THHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHH
T ss_pred ------------CCHHH-----------HHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecccccccc
Confidence 44445 4577899999999999999999999999998533 4444 455
Q ss_pred ChHHHHHHHHHhCCeecc-----cccCCCCCCcccceeEEEEEECCeeEEEEEcCCCCc---------------------
Q 009216 318 AEEDLLRVAAATGGTVQT-----SVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSGR--------------------- 371 (540)
Q Consensus 318 ~~~~le~ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~~--------------------- 371 (540)
++++|+|||++|||++++ +++++++++||+|+.|+ ++++++++|+||++++
T Consensus 283 rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~ 359 (546)
T 3rtk_A 283 RKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYD 359 (546)
T ss_dssp HHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred chhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhh
Confidence 689999999999999999 68999999999999997 5889999999997643
Q ss_pred --------------eEEEEeecCCHHHHHHHHHHHHHHHHHHHHHHhCCceeecCCcchHHHHHHHHHHHhhcCChHHHH
Q 009216 372 --------------TATIVLRGGADQFIEEAERSLHDAIMIVRRATKNSTVVAGGGAIDMEISKYLRQESRAIAGKSQFF 437 (540)
Q Consensus 372 --------------~~TIll~G~t~~~l~e~~~~i~dal~~~~~~l~~g~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~ 437 (540)
+|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++++.+|++++ .++++|++
T Consensus 360 ~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~ 436 (546)
T 3rtk_A 360 REKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATG 436 (546)
T ss_dssp HHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHH
Confidence 89999999999999999999999999999999999 99999999999999999876 78999999
Q ss_pred HHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHccCCCCCCCCeeeecCCCcccccccCCcccchHHHHHHHHHHHHHHH
Q 009216 438 INSYAKALEVIPRQLCDNAGFDATDVLNKLRQKHALPTGEGAPYGVDINTGGIADSFANFVWEPAVVKINAINAATEAAC 517 (540)
Q Consensus 438 ~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~~~~G~d~~~~~~~d~~~~gi~dp~~vk~~~l~~A~e~a~ 517 (540)
+++|++||+.||++|++|||+|+.+++.+|+.. . ..+|||..+|++.||++.|||||+.||+++|++|+|+|+
T Consensus 437 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~--~-----~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~ 509 (546)
T 3rtk_A 437 ANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL--P-----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAG 509 (546)
T ss_dssp HHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS--C-----TTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh--c-----CCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999874 2 448999999999999999999999999999999999999
Q ss_pred HHhchhhhhcCCCCCCCCC
Q 009216 518 LILSVDETVKNPKRSGIRE 536 (540)
Q Consensus 518 ~iL~id~~i~~~~~~~~~~ 536 (540)
+||++|++|...|.+++.+
T Consensus 510 ~iL~id~iI~~~~~~~~~~ 528 (546)
T 3rtk_A 510 LFLTTEAVVADKPEKEKAS 528 (546)
T ss_dssp HHHHCC-------------
T ss_pred HHHHHHHHHhcCCCCCCCC
Confidence 9999999999887765543
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=1.7e-37 Score=286.49 Aligned_cols=173 Identities=26% Similarity=0.467 Sum_probs=150.1
Q ss_pred cccceeEEeEEEecccCCccccCCCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHc
Q 009216 208 MRDSFLVNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQS 287 (540)
Q Consensus 208 ~~ds~li~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~ 287 (540)
++||++++|++|++++.+++ ||++++||||++++++|++++++.++++.++++++++++.++|++++++++++|++.
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~---mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~ 77 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPR---MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQL 77 (178)
T ss_dssp --CCSEEEEEEESCCCSSTT---SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEEEeccccCCC---CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 36899999999999999864 689999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCCeecccccCCCCCCccc-ceeEEEEEECCeeEEEEEc
Q 009216 288 GAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGT-CEHFEERQVGNERFNIFSG 366 (540)
Q Consensus 288 ~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~g 366 (540)
|+|||+++++|+|.+++||.++||++++++++++|+|||++|||++++++++++++.+|+ |+.|++.++|+++|++|+|
T Consensus 78 g~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~g 157 (178)
T 1gml_A 78 KPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITD 157 (178)
T ss_dssp CCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred CCCCceEEEEeecCCHH
Q 009216 367 CPSGRTATIVLRGGADQ 383 (540)
Q Consensus 367 ~~~~~~~TIll~G~t~~ 383 (540)
|++++.|||+|||++..
T Consensus 158 c~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 158 CKDPKACTILLRGASHH 174 (178)
T ss_dssp ESSTTSCEEEEEC----
T ss_pred CCCCCEEEEEEECCCcc
Confidence 99999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=1.2e-32 Score=248.93 Aligned_cols=154 Identities=32% Similarity=0.566 Sum_probs=148.2
Q ss_pred EEeEEEecccCCccccCCCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeEEE
Q 009216 214 VNGVAFKKTFSYAGFEQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKVVL 293 (540)
Q Consensus 214 i~Givl~~~~~~~~~~~~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~lii 293 (540)
++|++|++++.+++ ||++++||||++++++|++++++.++++.++++++++++.++|+++++.++++|++.|+|||+
T Consensus 1 i~Gvv~~k~~~~~~---mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl 77 (159)
T 1ass_A 1 MSGIVIDKEKVHSK---MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVL 77 (159)
T ss_dssp CCCEEESCCCSCTT---SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CceEEEecccCCCC---CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEE
Confidence 47999999999874 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCCeecccccCCCCCCcccceeEEEEEECCeeEEEEEcCCCC
Q 009216 294 SRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGTVQTSVNNVVDEVLGTCEHFEERQVGNERFNIFSGCPSG 370 (540)
Q Consensus 294 ~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~g~~~~ 370 (540)
|+++|+|.+++||+++||++++++++++|+|||++|||++++++++++++.+|+|+.|++.++|+++|++|+||++.
T Consensus 78 ~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 78 CQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp ESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred ECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999764
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.42 E-value=7.8e-13 Score=119.27 Aligned_cols=147 Identities=22% Similarity=0.297 Sum_probs=112.3
Q ss_pred ceeEEeEEEecccCCcccc----CCCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHH
Q 009216 211 SFLVNGVAFKKTFSYAGFE----QQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQ 286 (540)
Q Consensus 211 s~li~Givl~~~~~~~~~~----~~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~ 286 (540)
.++++||.||++|.||||. +|..+++||+||+++.++ ++..+ +.+.++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKI-------------s~i~~-----------ilP~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKI-------------SSLPD-----------LLPLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEE-------------CCHHH-----------HHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCcc-------------CCHHH-----------HHHHHHHHHH
Confidence 3678999999999999994 577889999999999874 56666 6788999999
Q ss_pred cCCeEEEecCcccHHHHHHHH--h----CCceeE-----ecCChHHHHHHHHHhCCeeccc-----ccCCCCCCccccee
Q 009216 287 SGAKVVLSRLAIGDLATQYFA--D----RDIFCA-----GRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEH 350 (540)
Q Consensus 287 ~~~~lii~~~~i~~~a~~~l~--~----~~I~~i-----~~v~~~~le~ia~~tGa~ii~~-----l~~l~~~~lG~~~~ 350 (540)
.+.+|+|.+.+|+..++..|. + -++.++ +..++..|++||.+||+++++. +++++.++||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 999999999999998887653 2 334444 5556889999999999999984 67888889999998
Q ss_pred EEEEEECCeeEEEEEcCCCCceEEEEeec-CCHHHHHHHHHHHHHHHH
Q 009216 351 FEERQVGNERFNIFSGCPSGRTATIVLRG-GADQFIEEAERSLHDAIM 397 (540)
Q Consensus 351 v~~~~ig~~~~~~~~g~~~~~~~TIll~G-~t~~~l~e~~~~i~dal~ 397 (540)
+... .+ -|.+++| .+...++++...++..+.
T Consensus 138 v~vt---kd-------------~T~iv~G~g~~~~I~~Rv~qIr~~ie 169 (194)
T 3m6c_A 138 VVVS---KD-------------DTVIVDGGGTAEAVANRAKHLRAEID 169 (194)
T ss_dssp EEEC---SS-------------CEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred EEEc---CC-------------ceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 8742 22 2444444 455666665555555443
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.42 E-value=7.3e-13 Score=113.89 Aligned_cols=123 Identities=23% Similarity=0.321 Sum_probs=99.2
Q ss_pred eEEEecccCCccc----cCCCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCCeE
Q 009216 216 GVAFKKTFSYAGF----EQQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGAKV 291 (540)
Q Consensus 216 Givl~~~~~~~~~----~~~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~~l 291 (540)
|+.||++|.|||| +.|...++||+||+++.++ ++.++ +.+.++++.+.+.+|
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~-----------llP~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKV-------------SNVRE-----------LLPILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEE-------------CCHHH-----------HHHHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccc-------------cCHHH-----------HHHHHHHHHHHCCCE
Confidence 8999999999999 4677889999999999874 56666 678899999999999
Q ss_pred EEecCcccHHHHHHHH---hCC---ceeE-----ecCChHHHHHHHHHhCCeeccc-----ccCCCCCCcccceeEEEEE
Q 009216 292 VLSRLAIGDLATQYFA---DRD---IFCA-----GRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEERQ 355 (540)
Q Consensus 292 ii~~~~i~~~a~~~l~---~~~---I~~i-----~~v~~~~le~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ 355 (540)
+|.+..|+..++..|. -+| +.++ +..++..|++||.+||+++++. +++.+.++||+|+++..
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~v-- 134 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI-- 134 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEE--
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEE--
Confidence 9999999998887664 233 3333 5667899999999999999974 66777889999998874
Q ss_pred ECCeeEEEEE
Q 009216 356 VGNERFNIFS 365 (540)
Q Consensus 356 ig~~~~~~~~ 365 (540)
..+..+.+.
T Consensus 135 -tkd~TtIv~ 143 (145)
T 1srv_A 135 -TKDETTIVG 143 (145)
T ss_dssp -CSSCEEEEE
T ss_pred -cCCCeEEeC
Confidence 444444443
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.37 E-value=8.6e-12 Score=112.72 Aligned_cols=144 Identities=19% Similarity=0.292 Sum_probs=109.6
Q ss_pred EEeEEEecccCCcccc----CCCccccCceEEEeecccccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 009216 214 VNGVAFKKTFSYAGFE----QQPKKFLNPKILLLNIELELKSEKENAEIRLSDPSQYQSIVDAEWNIIYDKLDKCVQSGA 289 (540)
Q Consensus 214 i~Givl~~~~~~~~~~----~~~~~~~n~~Ill~~~~Le~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~i~~~~~ 289 (540)
-+|+.||++|.||||. .|..+++||+||+++.+| ++.++ +.+.++++.+.+.
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKI-------------s~i~~-----------ilP~LE~v~~~~r 67 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKI-------------SNIRE-----------LLPVLEGVAKASK 67 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEE-------------CCHHH-----------HHHHHHHHHTSSC
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCcc-------------CCHHH-----------HHHHHHHHHHhCC
Confidence 3699999999999994 577789999999999874 56666 6788999999999
Q ss_pred eEEEecCcccHHHHHHHH--h----CCceeE-----ecCChHHHHHHHHHhCCeeccc-----ccCCCCCCcccceeEEE
Q 009216 290 KVVLSRLAIGDLATQYFA--D----RDIFCA-----GRVAEEDLLRVAAATGGTVQTS-----VNNVVDEVLGTCEHFEE 353 (540)
Q Consensus 290 ~lii~~~~i~~~a~~~l~--~----~~I~~i-----~~v~~~~le~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~ 353 (540)
+|+|.+..|+..++..|. + -++.++ +..++..|++||.+||+++++. +++++.++||+|+++..
T Consensus 68 pLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~v 147 (201)
T 3osx_A 68 PLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVI 147 (201)
T ss_dssp CEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE
T ss_pred CeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEE
Confidence 999999999998887653 2 334444 5556888999999999999984 67788889999998874
Q ss_pred EEECCeeEEEEEcCCCCceEEEEeec-CCHHHHHHHHHHHHHHHH
Q 009216 354 RQVGNERFNIFSGCPSGRTATIVLRG-GADQFIEEAERSLHDAIM 397 (540)
Q Consensus 354 ~~ig~~~~~~~~g~~~~~~~TIll~G-~t~~~l~e~~~~i~dal~ 397 (540)
. .+ -|+++.| .+...++++...++..+.
T Consensus 148 t---kd-------------~TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 N---KD-------------TTTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp C---SS-------------CEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred c---CC-------------ceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 2 22 2444444 455666665555555443
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=56.71 E-value=23 Score=29.82 Aligned_cols=52 Identities=19% Similarity=0.150 Sum_probs=38.8
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCCe
Q 009216 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (540)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa~ 332 (540)
..+.|.+.++++|||. ++++.+...|.++||-++.......-+-|.....++
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 4566677899999998 689999999999999999866544444455444443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=54.46 E-value=28 Score=28.40 Aligned_cols=52 Identities=31% Similarity=0.309 Sum_probs=38.8
Q ss_pred HHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCC
Q 009216 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (540)
Q Consensus 279 ~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa 331 (540)
...+.|.+.++++|||. ++++-+...|.++||-++.....+.-+-|.....+
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g 105 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGG 105 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcC
Confidence 44566677899999998 68999999999999999976554434444444443
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=53.03 E-value=38 Score=27.71 Aligned_cols=52 Identities=15% Similarity=0.097 Sum_probs=38.5
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCCe
Q 009216 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGGT 332 (540)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa~ 332 (540)
..+.|...++++|+|. ++++-+...|.++||-++.......-+-|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3455668899999998 489999999999999999865544444455444443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=51.14 E-value=33 Score=27.95 Aligned_cols=51 Identities=20% Similarity=0.124 Sum_probs=37.5
Q ss_pred HHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCCh-HHHHHHHHHhC
Q 009216 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAE-EDLLRVAAATG 330 (540)
Q Consensus 279 ~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~-~~le~ia~~tG 330 (540)
...+.|.+.++++|+|. ++++.+...|.++||-++..... ..-+-|.....
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~ 109 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLD 109 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHc
Confidence 34566677899999998 58999999999999999986554 33344444433
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=40.27 E-value=56 Score=27.39 Aligned_cols=51 Identities=12% Similarity=0.063 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCC
Q 009216 279 DKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (540)
Q Consensus 279 ~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa 331 (540)
...+.|.+.++++|||. ++++-+...|.+ ||-++.......-+-|.....+
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G 120 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEG 120 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhC
Confidence 34566667899999998 589999999999 9999987553333444444433
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=35.95 E-value=36 Score=27.50 Aligned_cols=51 Identities=12% Similarity=0.106 Sum_probs=37.4
Q ss_pred HHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhCC
Q 009216 280 KLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATGG 331 (540)
Q Consensus 280 ~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tGa 331 (540)
..+.|...++++|+|. ++++-+...|.++||-++.......-+-|.....+
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g 104 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEG 104 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhC
Confidence 3455667899999998 48999999999999999976554444445544444
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=27.78 E-value=1.2e+02 Score=23.64 Aligned_cols=47 Identities=9% Similarity=0.120 Sum_probs=34.7
Q ss_pred HHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCChHHHHHHHHHhC
Q 009216 282 DKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAEEDLLRVAAATG 330 (540)
Q Consensus 282 ~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~~~le~ia~~tG 330 (540)
+.+.+.++++|+|. ++++-+...|.++ |-++.....+--+-|.....
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~ 96 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIE 96 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHc
Confidence 55567899999997 6899999999999 99987655443444444433
No 39
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=23.05 E-value=69 Score=30.36 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=36.7
Q ss_pred HHHHHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCCh
Q 009216 278 YDKLDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVAE 319 (540)
Q Consensus 278 ~~~v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~~ 319 (540)
.++++|.+..|++++++-..-..++.++..+.||..++.++.
T Consensus 205 ~EmV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R~ 246 (268)
T 2pw9_A 205 SDMVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSRP 246 (268)
T ss_dssp HHHHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEecC
Confidence 367889999999999999999999999999999998876653
No 40
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=21.91 E-value=1.4e+02 Score=28.59 Aligned_cols=52 Identities=10% Similarity=0.047 Sum_probs=37.8
Q ss_pred HHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecC--C------------------------hHHHHHHHHHhCCe
Q 009216 281 LDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRV--A------------------------EEDLLRVAAATGGT 332 (540)
Q Consensus 281 v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v--~------------------------~~~le~ia~~tGa~ 332 (540)
+++|.+.+++|||.....++...+.|.+.||.++.-- . .+.++.+++++|..
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 4677888999999876555666777888888776321 0 35688889999854
No 41
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=20.13 E-value=1.9e+02 Score=27.34 Aligned_cols=52 Identities=15% Similarity=0.206 Sum_probs=36.5
Q ss_pred HHHHHHcCCeEEEecCcccHHHHHHHHhCCceeEecCC----hHHHHHHHHHhCCe
Q 009216 281 LDKCVQSGAKVVLSRLAIGDLATQYFADRDIFCAGRVA----EEDLLRVAAATGGT 332 (540)
Q Consensus 281 v~~i~~~~~~lii~~~~i~~~a~~~l~~~~I~~i~~v~----~~~le~ia~~tGa~ 332 (540)
+++|.+.+++|||.....++...+.|.+.+..++-... .+.++.|++++|-.
T Consensus 89 ~E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 89 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 46677889999998766666677778887765543322 34577888888854
Done!