Your job contains 1 sequence.
>009217
MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHII
HICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYS
YFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIV
KSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRILLSCHNLNSLCLEHPDKLALCGL
DPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIH
QDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGC
IFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSY
DDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHESTR
FSRFISSTFGNISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIHISAYTAIKNL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009217
(540 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006717 - symbol:AT5G65685 species:3702 "Ara... 1068 3.4e-113 2
TAIR|locus:2141936 - symbol:SS4 "starch synthase 4" speci... 871 3.7e-87 1
TIGR_CMR|GSU_3257 - symbol:GSU_3257 "glycogen synthase" s... 373 2.2e-34 1
TIGR_CMR|BA_5120 - symbol:BA_5120 "glycogen synthase" spe... 361 4.1e-33 1
TIGR_CMR|GSU_1023 - symbol:GSU_1023 "glycogen synthase" s... 289 7.1e-23 1
UNIPROTKB|P0A6U8 - symbol:glgA species:83333 "Escherichia... 253 7.9e-19 1
UNIPROTKB|Q9KRB6 - symbol:glgA "Glycogen synthase" specie... 165 7.6e-18 2
TIGR_CMR|VC_1726 - symbol:VC_1726 "glycogen synthase" spe... 165 7.6e-18 2
TAIR|locus:2102102 - symbol:SS2 "starch synthase 2" speci... 226 2.5e-15 1
UNIPROTKB|Q42968 - symbol:WAXY "Granule-bound starch synt... 189 3.4e-15 2
TAIR|locus:2169749 - symbol:SS1 "starch synthase 1" speci... 193 1.5e-13 2
TAIR|locus:2037950 - symbol:GBSS1 "granule bound starch s... 175 4.1e-13 2
UNIPROTKB|Q4KCP0 - symbol:glgA "Glycogen synthase" specie... 146 2.3e-08 2
>TAIR|locus:505006717 [details] [associations]
symbol:AT5G65685 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009011 "starch
synthase activity" evidence=TAS] EMBL:CP002688
GenomeReviews:BA000015_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
GO:GO:0009011 EMBL:BT029154 EMBL:AK118938 IPI:IPI00526251
RefSeq:NP_569018.1 UniGene:At.26575 ProteinModelPortal:Q8GWC5
STRING:Q8GWC5 PRIDE:Q8GWC5 EnsemblPlants:AT5G65685.1 GeneID:836698
KEGG:ath:AT5G65685 TAIR:At5g65685 InParanoid:Q8GWC5 OMA:PHIINIL
PhylomeDB:Q8GWC5 Genevestigator:Q8GWC5 Uniprot:Q8GWC5
Length = 460
Score = 1068 (381.0 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 206/314 (65%), Positives = 250/314 (79%)
Query: 1 MVLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHII 60
MV+ G++N EAS++RKLV +++ +++ D+L +GDA++LAELRRF + K+NG H+I
Sbjct: 135 MVINGLVNIEEASSMRKLVKEHEANISVFPLDVLQQGDAEILAELRRFTNKGKRNGLHVI 194
Query: 61 HICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYS 120
HICTEM PLVS+G LASY+TGLS ALQ +G++VEVILPKY+ ++LD ++GLREI+A+ YS
Sbjct: 195 HICTEMAPLVSVGPLASYITGLSCALQEEGYMVEVILPKYSTLDLDEIEGLREIEADAYS 254
Query: 121 YFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIV 180
YF+GQLHAN+IW GVVSGIGVT IQP++YSS F+R+ VYGY DDF+RF YFSRASLDYI
Sbjct: 255 YFDGQLHANRIWNGVVSGIGVTLIQPVYYSSMFSRDKVYGYQDDFDRFAYFSRASLDYIA 314
Query: 181 KSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIXXXXXXXXXXXXEHPDKLALCGL 240
KS KQPDVLHIHNW+TAIVGPLFWD+FV QGLEGTRI P+KL LCGL
Sbjct: 315 KSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFDKGLVP-PEKLELCGL 373
Query: 241 DPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIH 300
DPA LHR DRLQDNT H VNILKGGVVYSNKVVI+SS HS S+ GLE TLAIH
Sbjct: 374 DPAELHRLDRLQDNTNPHFVNILKGGVVYSNKVVIMSSSHS------SIP-GLEPTLAIH 426
Query: 301 QDKLLVAPCGFDSS 314
+DKL AP G D+S
Sbjct: 427 KDKLFFAPFGMDNS 440
Score = 69 (29.3 bits), Expect = 3.4e-113, Sum P(2) = 3.4e-113
Identities = 14/23 (60%), Positives = 18/23 (78%)
Query: 519 DFSWDAD-CNDIHISAYTAIKNL 540
D S + D C D+H+SAYT+IKNL
Sbjct: 438 DNSMEKDLCCDLHVSAYTSIKNL 460
>TAIR|locus:2141936 [details] [associations]
symbol:SS4 "starch synthase 4" species:3702 "Arabidopsis
thaliana" [GO:0009011 "starch synthase activity" evidence=IEA]
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0009250
"glucan biosynthetic process" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016757 "transferase activity,
transferring glycosyl groups" evidence=ISS] [GO:0005982 "starch
metabolic process" evidence=RCA;IMP] [GO:0000272 "polysaccharide
catabolic process" evidence=RCA] [GO:0001666 "response to hypoxia"
evidence=RCA] [GO:0009664 "plant-type cell wall organization"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0019375 "galactolipid biosynthetic process"
evidence=RCA] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002687
GenomeReviews:CT486007_GR InterPro:IPR013534 Pfam:PF08323
EMBL:AL161548 GO:GO:0009501 GO:GO:0005982 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0019252 EMBL:AL021713 EMBL:AK226610
IPI:IPI00524471 PIR:T04926 RefSeq:NP_193558.3 UniGene:At.46236
ProteinModelPortal:Q0WVX5 STRING:Q0WVX5 PRIDE:Q0WVX5
EnsemblPlants:AT4G18240.1 GeneID:827550 KEGG:ath:AT4G18240
TAIR:At4g18240 InParanoid:Q0WVX5 OMA:LVGCITR PhylomeDB:Q0WVX5
ProtClustDB:PLN02939 Genevestigator:Q0WVX5 Uniprot:Q0WVX5
Length = 1040
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 190/545 (34%), Positives = 294/545 (53%)
Query: 2 VLTGMINSGEASNLRKLVFDYKVSVADLFADILPEGDADLLAELRRFGSGSKKNGFHIIH 61
+L I S +A LR +V+ + D + D+ + + D ++ + S +G +++H
Sbjct: 487 LLEKKIASNDADLLRDMVWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVH 546
Query: 62 ICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAECYSY 121
I EM P+ +G L V GL ALQRKGHLVE+ILPKY CM D V+ LR + SY
Sbjct: 547 IAAEMAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALDTVVESY 606
Query: 122 FNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRASLDYIVK 181
F+G+L+ NKIWIG V G+ V FI+P H S FF R YG DDF RF+YFSRA+L+ +++
Sbjct: 607 FDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDFRRFSYFSRAALELLLQ 666
Query: 182 SRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIXXXXXXXXXXXXEHPDKLALCGLD 241
S K+PD++H H+W+TA V PL+WD++ +GL+ RI +L CGLD
Sbjct: 667 SGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSARICFTCHNFEYQGTASASELGSCGLD 726
Query: 242 PARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQ 301
+L+RPDR+QD++ VN +KG +++SN V VS +++ GL STL H
Sbjct: 727 VNQLNRPDRMQDHSSGDRVNPVKGAIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHS 786
Query: 302 DKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSK-DASTIVVGC 360
K + G D+ +W+P+ D FL + A+D++GK K L++QLGLS ++ +VGC
Sbjct: 787 KKFIGILNGIDTDSWNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLVGC 846
Query: 361 IFSDVSDVFLENLK-AVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELK--DGIVIFV 417
I V + ++ A+ R ++ G QFV G++ +P R +++ K D + + +
Sbjct: 847 ITRLVPQKGVHLIRHAIYRTLELGG-QFVLLGSSPVPHIQREFEGIEQQFKSHDHVRLLL 905
Query: 418 DSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFAEFDHE 477
YD+AL H I++ SD+ + S +P + A++YG+ PIA + + F + D +
Sbjct: 906 -KYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVF-DIDDD 963
Query: 478 XXXX------XXXXXXXXG-NISLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCNDIH 530
G N +L +A K + W R ++ M DFSW +
Sbjct: 964 TIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEKWMRLVEKVMSIDFSWGSSATQYE 1023
Query: 531 ISAYT 535
YT
Sbjct: 1024 -ELYT 1027
>TIGR_CMR|GSU_3257 [details] [associations]
symbol:GSU_3257 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_954298.1
ProteinModelPortal:Q747K8 GeneID:2685785 KEGG:gsu:GSU3257
PATRIC:22029355 OMA:DEWNPAA ProtClustDB:CLSK829188
BioCyc:GSUL243231:GH27-3233-MONOMER Uniprot:Q747K8
Length = 484
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 121/476 (25%), Positives = 215/476 (45%)
Query: 59 IIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAEC 118
++ + +E+ P G LA L AL+R GH V VI+P Y C + G+R+ +
Sbjct: 3 VLMVASEVAPFARTGGLAEVTAALPAALRRMGHDVRVIMPFYRCAAQTEL-GVRKARKSA 61
Query: 119 YSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYG-----YSDDFERFTYFSR 173
NG+ H + + + V ++ FF+R+ +YG Y D+ RF +F R
Sbjct: 62 EVSLNGETHKGFLRQAALGDVPVYLVEN---REFFSRDYLYGTPEGDYPDNPRRFAFFCR 118
Query: 174 ASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIXXXXXXXXXXXXE-HP 232
+ L ++ + +PDV+H H+W+TA++ P+ + R P
Sbjct: 119 SVLQFLKRMDFRPDVIHCHDWQTALI-PIILRLEAADDPFFARTATVFTIHNLAYQGLFP 177
Query: 233 -DKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSH 291
+A GL P+ L + L+ + +N++KG ++ ++ + VS + + + +
Sbjct: 178 APAIAETGL-PSALFTTEWLEYYGQ---LNLMKGAILTADLITTVSETYRREIMTPTQGC 233
Query: 292 GLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSK 351
GLE LA D L G D+ W+P+ DK + NY A + GK K+ LQ++LG+
Sbjct: 234 GLEGVLARRGDDLFGIVNGIDTDEWNPAADKRIFRNYSARALAGKAADKLELQRELGMPA 293
Query: 352 DASTIVVGCI--FSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEEL 409
S ++G + ++ + L L+ + R A+ +QFV GT R L SF+ +
Sbjct: 294 APSVPLIGMVSRLAEQKGIDLV-LELLPRLAESE-LQFVLLGTGNACYLER-LNSFRSKG 350
Query: 410 KDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFR 469
I I + ++D L I++GSD+ L S +P L A++YG P+ + +
Sbjct: 351 AANISINL-GFNDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDT 409
Query: 470 HFAEFDHEXXXXXXXXXXXXGNI---SLSQALEEIKNNPLSWKRKIKDAMLQDFSW 522
H + ++ +AL ++ SW+R ++ M +D SW
Sbjct: 410 VVDVTRHPREGTGFTFEDFTADACWEAIERALAGYRDRE-SWRRIMRRGMHRDVSW 464
>TIGR_CMR|BA_5120 [details] [associations]
symbol:BA_5120 "glycogen synthase" species:198094 "Bacillus
anthracis str. Ames" [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] [GO:0009011 "starch synthase activity" evidence=ISS]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 HOGENOM:HOG000294940 KO:K00703
GO:GO:0009011 TIGRFAMs:TIGR02095 RefSeq:NP_847306.1
RefSeq:YP_021773.2 RefSeq:YP_031002.1 ProteinModelPortal:Q81K85
IntAct:Q81K85 DNASU:1084436 EnsemblBacteria:EBBACT00000008312
EnsemblBacteria:EBBACT00000017669 EnsemblBacteria:EBBACT00000022941
GeneID:1084436 GeneID:2819822 GeneID:2849958 KEGG:ban:BA_5120
KEGG:bar:GBAA_5120 KEGG:bat:BAS4758 OMA:ADVIMVP
ProtClustDB:PRK00654 BioCyc:BANT260799:GJAJ-4812-MONOMER
BioCyc:BANT261594:GJ7F-4972-MONOMER Uniprot:Q81K85
Length = 476
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 119/474 (25%), Positives = 208/474 (43%)
Query: 58 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAE 117
+I+ +E P V G LA L L++ G V +ILP Y+ + Q LR+
Sbjct: 2 NILFAVSECVPFVKSGGLADVAGALPKELKKLGVEVRIILPNYSLIP----QKLRD-GCT 56
Query: 118 CYSYFNGQLHANKIWIGVVSGI--GVTFIQPLHYSSFFNRESVYGYSDDFERFTYFSRAS 175
+ N L + G++ G G+T+ + +F R+S+YG+ DD ERF+YFS+A
Sbjct: 57 LHKVINVPLGWRNQYCGILKGEQDGITYYL-IDNEYYFKRDSLYGHYDDGERFSYFSKAV 115
Query: 176 LDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGL-EGTRIXXXXXXXXXXXXEHPDK 234
L+ I + DVLH H+W TA+V L + + L E + P+
Sbjct: 116 LECIPHLDFEVDVLHSHDWHTAMVNFLLREKYQDNPLYEHIKTVYTIHNLQFQGVFPPEV 175
Query: 235 LA-LCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGL 293
+ L L H ++L+ VN +KGG++ S+++ VS + + L
Sbjct: 176 MYDLLELGDEYFHS-EQLEFYGN---VNFMKGGIIASDQITAVSPTYKEEIQYEFFGEKL 231
Query: 294 ESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDA 353
+ L + DKL G D+S ++P D ++T Y A+ + K K LQ+ GL +
Sbjct: 232 DGLLRKYNDKLSGIVNGIDTSVYNPETDSYITAQYDADSLYEKNENKRALQRYFGLPEKE 291
Query: 354 STIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQE-ELKDG 412
T ++ + L+ ++ V R +Q + G+ S + E +
Sbjct: 292 DTPIISMVTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGD--SEYEQFFEWMAYEYPEK 349
Query: 413 IVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIEFRHFA 472
+ +++ +++ L H +++GSD+ L S +P L AL YG PI + +
Sbjct: 350 VKVYI-GFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDT-VQ 407
Query: 473 EFDHEXXXXXXXXXXXXG-NISLSQALEEIK--NNPLSWKRKIKDAMLQDFSWD 523
+D E + L L I+ ++ W++ +K AM +D+SW+
Sbjct: 408 SYDEETGEGNGFSFTNFNAHDMLHTVLRAIEFYHDKSVWEQLVKQAMTEDYSWE 461
>TIGR_CMR|GSU_1023 [details] [associations]
symbol:GSU_1023 "glycogen synthase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004373 "glycogen (starch)
synthase activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic
process" evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR013534
Pfam:PF08323 RefSeq:NP_952077.1 ProteinModelPortal:Q74ED9
GeneID:2685960 KEGG:gsu:GSU1023 PATRIC:22024816 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 OMA:IYFIDHE ProtClustDB:CLSK924464
BioCyc:GSUL243231:GH27-1018-MONOMER GO:GO:0009011
TIGRFAMs:TIGR02095 Uniprot:Q74ED9
Length = 501
Score = 289 (106.8 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 97/419 (23%), Positives = 173/419 (41%)
Query: 58 HIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLD--GVQGLREIK 115
+I+ +E P G LA V L L GH V V++P Y+ ++ + G++ L +
Sbjct: 5 NILMAASECVPFAKEGGLADVVGVLPKYLAHMGHDVRVVMPLYSRIDPERFGLERLPGVL 64
Query: 116 AECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVY-----GYSDDFERFTY 170
Q +W G + G V + L + ++ RE +Y GY D+ RF +
Sbjct: 65 VVPMGIMGNQYCG--VWEGRLPGSAVP-VYFLEHEGYYGREGLYEEDNVGYMDNDNRFIF 121
Query: 171 FSRASLDYIVKSRKQPDVLHIHNWETAIVGPLFWDIFVKQG--LEGTRIXXXXXXXXXXX 228
SRA+++ PDV H H+W TA V P+F + + + G
Sbjct: 122 LSRAAMELPKLIGFAPDVFHAHDWHTAAV-PVFLNTLYRDDPLVGGAASVLTVHNMQHQG 180
Query: 229 XEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRS 288
+P + + G+ +DN N+LKGG+ ++ + VS +++
Sbjct: 181 NFYPGAMEVLGIGWEHFTFLGLEKDNQ----TNLLKGGLYHATVLNTVSEGYAREMQTPE 236
Query: 289 LSHGLESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLG 348
GL+ + L+ G D W+P D + NY D+ GK +CK +Q+ G
Sbjct: 237 YGWGLDGVVRARSADLVGILNGVDYEEWNPETDPHIVANYSRSDLSGKKLCKRDVQRFFG 296
Query: 349 LSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEE 408
L + + G + V ++ L + +Q V G + P + + E
Sbjct: 297 LPERDDVPLFGLVGRLVKQKGIDILAEAIHRILALDVQVVMLGAGE-PWSHFYFGDVRNE 355
Query: 409 LKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE 467
+ +++ Y++ L H I +GSD + S +P + +L+YG PI + ++
Sbjct: 356 YPEKFGLYI-GYNNGLSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLD 413
>UNIPROTKB|P0A6U8 [details] [associations]
symbol:glgA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0009011 "starch synthase activity" evidence=IEA;IDA]
[GO:0005978 "glycogen biosynthetic process" evidence=IEA;IMP]
HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0005978 GO:GO:0006974 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP ProtClustDB:PRK00654 EMBL:V00281 EMBL:J02616
EMBL:J01616 PIR:H65138 RefSeq:NP_417887.1 RefSeq:YP_492004.1
PDB:2QZS PDB:2R4T PDB:2R4U PDB:3COP PDB:3CX4 PDB:3D1J PDB:3GUH
PDBsum:2QZS PDBsum:2R4T PDBsum:2R4U PDBsum:3COP PDBsum:3CX4
PDBsum:3D1J PDBsum:3GUH ProteinModelPortal:P0A6U8 SMR:P0A6U8
IntAct:P0A6U8 PRIDE:P0A6U8 EnsemblBacteria:EBESCT00000004694
EnsemblBacteria:EBESCT00000004695 EnsemblBacteria:EBESCT00000004696
EnsemblBacteria:EBESCT00000016997 GeneID:12933507 GeneID:947932
KEGG:ecj:Y75_p3748 KEGG:eco:b3429 PATRIC:32122298 EchoBASE:EB0372
EcoGene:EG10377 HOGENOM:HOG000294941
BioCyc:EcoCyc:GLYCOGENSYN-MONOMER BioCyc:ECOL316407:JW3392-MONOMER
BioCyc:MetaCyc:GLYCOGENSYN-MONOMER EvolutionaryTrace:P0A6U8
Genevestigator:P0A6U8 Uniprot:P0A6U8
Length = 477
Score = 253 (94.1 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 104/479 (21%), Positives = 185/479 (38%)
Query: 59 IIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKAEC 118
++H+C+EM PL+ G LA + L A G V+LP + + GV + +
Sbjct: 3 VLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRR-GVTDAQVVSRR- 60
Query: 119 YSYFNGQLHANKIWIGVVSGIGVTFIQPLH-YS---SFFNRESVYGYSDDFERFTYFSRA 174
F G + + G +G+G+ I H Y S ++ +++ Y+D+ RF
Sbjct: 61 -DTFAGHI---TLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWV 116
Query: 175 SLDYI--VKSRKQPDVLHIHNWETAIVGPLFWDIFVKQGLEGTRIXXXXXXXXXXX--XE 230
+ + +PDV+H H+W + P + +G +
Sbjct: 117 GAEMASGLDPFWRPDVVHAHDWHAGLA-PAY---LAARGRPAKSVFTVHNLAYQGMFYAH 172
Query: 231 HPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLS 290
H + + L P L+ N + ++ LK G+ Y++ + VS +++ +
Sbjct: 173 HMNDIQL----PWSFFNIHGLEFNGQ---ISFLKAGLYYADHITAVSPTYAREITEPQFA 225
Query: 291 HGLESTLAI-HQDKLLVAPC-GFDSSTWDPSNDKFLTENYCAEDMKGKTVCKVTLQQQLG 348
+G+E L H++ L G D W P D L Y + ++ K K LQ +G
Sbjct: 226 YGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMG 285
Query: 349 LSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEE 408
L D + + S L+ + + G +G Q G P ++ E
Sbjct: 286 LKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-PVLQEGFLAAAAE 344
Query: 409 LKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDI-E 467
+ + + Y +A H I G+D+IL S +P L LKYG P+ + + +
Sbjct: 345 YPGQVGVQI-GYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLAD 403
Query: 468 FRHFAEFDHEXXXXXXXXXXXXGNI-SLSQALEE---IKNNPLSWKRKIKDAMLQDFSW 522
++ N SL +A+ + + P W+ + AM DFSW
Sbjct: 404 TVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSW 462
>UNIPROTKB|Q9KRB6 [details] [associations]
symbol:glgA "Glycogen synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004373 "glycogen
(starch) synthase activity" evidence=ISS] [GO:0005978 "glycogen
biosynthetic process" evidence=ISS] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00164 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0005978 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165 RefSeq:NP_231362.1
ProteinModelPortal:Q9KRB6 DNASU:2613731 GeneID:2613731
KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT Uniprot:Q9KRB6
Length = 484
Score = 165 (63.1 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 64/276 (23%), Positives = 110/276 (39%)
Query: 260 VNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPS 319
V++L+ G+ +++KV VS ++ + +HGL L G D S W+P
Sbjct: 202 VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPR 261
Query: 320 NDKFLTENYC--AEDM-KGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAV 376
D +L Y E M KGK +CK LQ++L L + G + L +
Sbjct: 262 TDHYLPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQKGFHYLLPI 320
Query: 377 VRGAKMRGIQFVFTGTNKLPSASRA-LVSFQEELKDGIVIFVDSYDDALLHLIFSGSDII 435
+ +Q V GT + A+R ++ K FV++Y + L H + +GSD
Sbjct: 321 LEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAK---FAFVETYSERLAHWVEAGSDFF 377
Query: 436 LCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE--FRHFAEFDHEXXXXXXXXXXXXGN-I 492
L S + + ++ YG PI ++ + +F I
Sbjct: 378 LMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVNDYDKFPERATGFGYQEPTPEALLI 437
Query: 493 SLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCND 528
++ +AL P + + AM Q+FSW+ +
Sbjct: 438 TMQRALLFYLQQPEEMLKVQQRAMQQNFSWEESAQE 473
Score = 129 (50.5 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 57 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKA 116
F++ +E+ LV G LA L AL+ V + LP Y V G + +
Sbjct: 4 FNVWFTVSEVQGLVKSGGLADVAKALPQALKALHQQVAIALPAYR-----SVPGKEDAEL 58
Query: 117 ECYSYFNGQLHAN-KIWIGVVSGIGVTFIQPLHYSSFFNRESVYG-----YSDDFERFTY 170
+ H ++ + G+ + I ++F+R ++Y Y+D+ ERF +
Sbjct: 59 VLETELTHWPHTQYRVLKRDLDGVPIYLID---CPAYFDRPALYAENNQAYADNGERFGF 115
Query: 171 FSRASLDYIVKSRKQPDVLHIHNWETAIV 199
FS A LD + K QPD++H ++W T +V
Sbjct: 116 FSAACLDVLPKLGIQPDIIHANDWHTGLV 144
>TIGR_CMR|VC_1726 [details] [associations]
symbol:VC_1726 "glycogen synthase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004373 "glycogen (starch) synthase
activity" evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005978 CAZy:GT5 InterPro:IPR013534
Pfam:PF08323 eggNOG:COG0297 KO:K00703 GO:GO:0009011
TIGRFAMs:TIGR02095 ProtClustDB:PRK00654 GO:GO:0004373 PIR:F82165
RefSeq:NP_231362.1 ProteinModelPortal:Q9KRB6 DNASU:2613731
GeneID:2613731 KEGG:vch:VC1726 PATRIC:20082512 OMA:VSATHIT
Uniprot:Q9KRB6
Length = 484
Score = 165 (63.1 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 64/276 (23%), Positives = 110/276 (39%)
Query: 260 VNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPS 319
V++L+ G+ +++KV VS ++ + +HGL L G D S W+P
Sbjct: 202 VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPR 261
Query: 320 NDKFLTENYC--AEDM-KGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAV 376
D +L Y E M KGK +CK LQ++L L + G + L +
Sbjct: 262 TDHYLPATYSDEPESMRKGKALCKTALQEELHLPV-TDVPLFGMVCRLTHQKGFHYLLPI 320
Query: 377 VRGAKMRGIQFVFTGTNKLPSASRA-LVSFQEELKDGIVIFVDSYDDALLHLIFSGSDII 435
+ +Q V GT + A+R ++ K FV++Y + L H + +GSD
Sbjct: 321 LEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAK---FAFVETYSERLAHWVEAGSDFF 377
Query: 436 LCHSFHDPLLQVPLKALKYGAAPIAVTSSDIE--FRHFAEFDHEXXXXXXXXXXXXGN-I 492
L S + + ++ YG PI ++ + +F I
Sbjct: 378 LMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTVNDYDKFPERATGFGYQEPTPEALLI 437
Query: 493 SLSQALEEIKNNPLSWKRKIKDAMLQDFSWDADCND 528
++ +AL P + + AM Q+FSW+ +
Sbjct: 438 TMQRALLFYLQQPEEMLKVQQRAMQQNFSWEESAQE 473
Score = 129 (50.5 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 57 FHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREIKA 116
F++ +E+ LV G LA L AL+ V + LP Y V G + +
Sbjct: 4 FNVWFTVSEVQGLVKSGGLADVAKALPQALKALHQQVAIALPAYR-----SVPGKEDAEL 58
Query: 117 ECYSYFNGQLHAN-KIWIGVVSGIGVTFIQPLHYSSFFNRESVYG-----YSDDFERFTY 170
+ H ++ + G+ + I ++F+R ++Y Y+D+ ERF +
Sbjct: 59 VLETELTHWPHTQYRVLKRDLDGVPIYLID---CPAYFDRPALYAENNQAYADNGERFGF 115
Query: 171 FSRASLDYIVKSRKQPDVLHIHNWETAIV 199
FS A LD + K QPD++H ++W T +V
Sbjct: 116 FSAACLDVLPKLGIQPDIIHANDWHTGLV 144
>TAIR|locus:2102102 [details] [associations]
symbol:SS2 "starch synthase 2" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
[GO:0009011 "starch synthase activity" evidence=IMP] [GO:0010021
"amylopectin biosynthetic process" evidence=IMP] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0010264 "myo-inositol
hexakisphosphate biosynthetic process" evidence=RCA] [GO:0019375
"galactolipid biosynthetic process" evidence=RCA] HAMAP:MF_00484
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC008261 GO:GO:0009501 eggNOG:COG0297 HOGENOM:HOG000294940
KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0010021
GO:GO:0019252 EMBL:AY054467 EMBL:BT002555 IPI:IPI00531533
RefSeq:NP_186767.1 UniGene:At.18317 ProteinModelPortal:Q9MAC8
SMR:Q9MAC8 IntAct:Q9MAC8 STRING:Q9MAC8 PaxDb:Q9MAC8 PRIDE:Q9MAC8
EnsemblPlants:AT3G01180.1 GeneID:820294 KEGG:ath:AT3G01180
TAIR:At3g01180 InParanoid:Q9MAC8 OMA:ECAPFSK PhylomeDB:Q9MAC8
ProtClustDB:CLSN2684979 Genevestigator:Q9MAC8 Uniprot:Q9MAC8
Length = 792
Score = 226 (84.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 114/491 (23%), Positives = 194/491 (39%)
Query: 55 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREI 114
N ++I + E P G L L +L R+GH V V++P+YA G+R+
Sbjct: 299 NVMNVILVAAECAPFSKTGGLGDVAGALPKSLARRGHRVMVVVPRYAEYAEAKDLGVRKR 358
Query: 115 KAECYSYFNGQLHANKIWIGVVSGIGVTFIQPLHYSSFFNRESVYGYS--DDFERFTYFS 172
Y GQ + + G+ FI + N ++YG + D +R F
Sbjct: 359 ----YKVA-GQDMEVMYFHAFIDGVDFVFIDSPEFRHLSN--NIYGGNRLDILKRMVLFC 411
Query: 173 RASLD---YIVKSRK---QPDVLHIHN-WETAIVGPLFWDIFVKQ-GL-EGTRIXXXXXX 223
+A+++ Y+ ++ I N W TA++ P++ + + G+ + TR
Sbjct: 412 KAAVEVPWYVPCGGVCYGDGNLAFIANDWHTALL-PVYLKAYYRDHGIMKYTRSVLVIHN 470
Query: 224 XXXXXXEHPDKLALCGLDPARLHRPDRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKG 283
D + L P+ +L D NI G+ +++V+ VS H
Sbjct: 471 IAHQGRGPVDDFSYVDL-PSHYLDSFKLYDPVGGEHFNIFAAGLKAADRVLTVS--HGYS 527
Query: 284 RIIRSLSHG--LESTLAIHQDKLLVAPCGFDSSTWDPSNDKFLTE----NYCAEDMK-GK 336
+++L G L + + + K G D+ W+P D +L NY E++ GK
Sbjct: 528 WEVKTLEGGWGLHNIINENDWKFRGIVNGIDTQEWNPEFDTYLHSDDYTNYSLENLHIGK 587
Query: 337 TVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLP 396
CK LQ++LGL ++G I ++ + V + +Q V GT + P
Sbjct: 588 PQCKAALQKELGLPVRPDVPLIGFIGRLDHQKGVDLIAEAVPWMMSQDVQLVMLGTGR-P 646
Query: 397 SASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHSFHDPLLQVPLKALKYGA 456
L + + +D +V + H I +G+DI+L S +P L A+ YG
Sbjct: 647 DLEEVLRQMEHQYRDKARGWV-GFSVKTAHRITAGADILLMPSRFEPCGLNQLYAMNYGT 705
Query: 457 API--AVTSSDIEFRHFAEFDHEXXXXXXXXXXXXGNI--SLSQALEEIKNNPLSWKRKI 512
P+ AV + F + E G + +L L + SW+
Sbjct: 706 IPVVHAVGGLRDTVQQFDPYS-ETGLGWTFDSAEAGKLIHALGNCLLTYREYKESWEGLQ 764
Query: 513 KDAMLQDFSWD 523
+ M QD SWD
Sbjct: 765 RRGMTQDLSWD 775
>UNIPROTKB|Q42968 [details] [associations]
symbol:WAXY "Granule-bound starch synthase 1,
chloroplastic/amyloplastic" species:4538 "Oryza glaberrima"
[GO:0004373 "glycogen (starch) synthase activity" evidence=ISS]
[GO:0005982 "starch metabolic process" evidence=ISS] [GO:0009501
"amyloplast" evidence=ISS] InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00152 GO:GO:0009507 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 GO:GO:0005982
GO:GO:0009011 TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252
GO:GO:0033840 EMBL:D10472 ProteinModelPortal:Q42968
EnsemblPlants:ORGLA06G0020500.1 Gramene:Q42968 Uniprot:Q42968
Length = 609
Score = 189 (71.6 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 260 VNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPS 319
+N +K G++ +++V+ VS +++ +I ++ G E + + G D S WDPS
Sbjct: 305 INWMKAGILEADRVLTVSPYYAE-ELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPS 363
Query: 320 NDKFLTENYCAED-MKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVR 378
DK++T Y A ++ K + K LQ + GL D ++ I + + A +
Sbjct: 364 KDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIP 423
Query: 379 GAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCH 438
+Q V GT K L+ EE G V V ++ L HLI +G+D++
Sbjct: 424 ELMQEDVQIVLLGTGK--KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVP 481
Query: 439 SFHDPLLQVPLKALKYGAAPIAVTSS 464
S +P + L+ ++YG P A S+
Sbjct: 482 SRFEPCGLIQLQGMRYGT-PCACAST 506
Score = 81 (33.6 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 46/169 (27%), Positives = 68/169 (40%)
Query: 56 GFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY-ACMNLDGVQGLREI 114
G +++ + EM P G L + GL A+ GH V VI P+Y + + EI
Sbjct: 82 GMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEI 141
Query: 115 K-AECYSYFNGQLHANKIWIGVVSGIGVTFIQ-PLHYSSFFNR--ESVYG------YSDD 164
K A+ Y H K G+ FI P + + E +YG Y D+
Sbjct: 142 KVADRYERVRF-FHCYK------RGVDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDN 194
Query: 165 FERFTYFSRASLDY--IVKSRKQP--------DVLHIHN-WETAIVGPL 202
RF+ +A+L+ I+ P DV+ + N W T GPL
Sbjct: 195 QMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHT---GPL 240
>TAIR|locus:2169749 [details] [associations]
symbol:SS1 "starch synthase 1" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0009250 "glucan
biosynthetic process" evidence=IEA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS] [GO:0009011
"starch synthase activity" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0010021 "amylopectin biosynthetic process"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019375 "galactolipid
biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR001296
InterPro:IPR011835 Pfam:PF00534 UniPathway:UPA00152 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 EMBL:AB006701 CAZy:GT5
InterPro:IPR013534 Pfam:PF08323 GO:GO:0009501 eggNOG:COG0297
HOGENOM:HOG000294940 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
OMA:ADVIMVP GO:GO:0010021 GO:GO:0019252 EMBL:AY128273 EMBL:AK226881
EMBL:AF121673 IPI:IPI00518916 RefSeq:NP_001190378.1
RefSeq:NP_197818.1 UniGene:At.22528 ProteinModelPortal:Q9FNF2
SMR:Q9FNF2 STRING:Q9FNF2 PaxDb:Q9FNF2 PRIDE:Q9FNF2
EnsemblPlants:AT5G24300.1 EnsemblPlants:AT5G24300.2 GeneID:832497
KEGG:ath:AT5G24300 TAIR:At5g24300 InParanoid:Q9FNF2
PhylomeDB:Q9FNF2 ProtClustDB:CLSN2686324 Genevestigator:Q9FNF2
GermOnline:AT5G24300 Uniprot:Q9FNF2
Length = 652
Score = 193 (73.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 63/271 (23%), Positives = 121/271 (44%)
Query: 260 VNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAPCGFDSSTWDPS 319
VN+LKG +V S++++ VS ++ +GL+ L+ + + G + W+PS
Sbjct: 363 VNVLKGAIVTSDRIITVSQGYAWEITTVEGGYGLQDLLSSRKSVINGITNGINVDEWNPS 422
Query: 320 NDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSDVFLENLKAVVRG 379
D+ + +Y A+D+ K CK+ LQ++LGL ++G I ++ ++
Sbjct: 423 TDEHIPFHYSADDVSEKIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPD 482
Query: 380 AKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSDIILCHS 439
+ IQFV G+ P + S +E +D +V ++ + H I +G DI+L S
Sbjct: 483 LMVDDIQFVMLGSGD-PKYESWMRSMEETYRDKFRGWV-GFNVPISHRITAGCDILLMPS 540
Query: 440 FHDPLLQVPLKALKYGAAPIAVTSSDIE-----FRHFAEFDHEXXXXXXXXXXXXGNI-- 492
+P L A++YG P+ + + F +AE ++
Sbjct: 541 RFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVENFNPYAEGGAGTGTGWVFTPLSKDSMVS 600
Query: 493 SLSQALEEIKNNPLSWKRKIKDAMLQDFSWD 523
+L A + SW+ ++ M +++SW+
Sbjct: 601 ALRLAAATYREYKQSWEGLMRRGMTRNYSWE 631
Score = 62 (26.9 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 50 SGSKKNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 100
SG + +++ + +E P G L L AL +GH V VI P+Y
Sbjct: 135 SGKAEVVNNLVFVTSEAAPYSKTGGLGDVCGSLPIALAGRGHRVMVISPRY 185
>TAIR|locus:2037950 [details] [associations]
symbol:GBSS1 "granule bound starch synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0009011 "starch synthase
activity" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009250 "glucan biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=RCA] [GO:0010264
"myo-inositol hexakisphosphate biosynthetic process" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
InterPro:IPR001296 InterPro:IPR011835 Pfam:PF00534
UniPathway:UPA00152 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
EMBL:AC006424 eggNOG:COG0297 HOGENOM:HOG000294940 GO:GO:0009011
TIGRFAMs:TIGR02095 GO:GO:0004373 GO:GO:0019252 EMBL:AY094405
EMBL:AY123983 EMBL:AY149948 EMBL:AY088544 IPI:IPI00520957
PIR:F86453 RefSeq:NP_174566.1 UniGene:At.11953
ProteinModelPortal:Q9MAQ0 SMR:Q9MAQ0 IntAct:Q9MAQ0 STRING:Q9MAQ0
PaxDb:Q9MAQ0 PRIDE:Q9MAQ0 EnsemblPlants:AT1G32900.1 GeneID:840184
KEGG:ath:AT1G32900 TAIR:At1g32900 InParanoid:Q9MAQ0 KO:K13679
OMA:ERYPQNI PhylomeDB:Q9MAQ0 ProtClustDB:CLSN2682839
Genevestigator:Q9MAQ0 GermOnline:AT1G32900 GO:GO:0009568
GO:GO:0033840 Uniprot:Q9MAQ0
Length = 610
Score = 175 (66.7 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 56/223 (25%), Positives = 101/223 (45%)
Query: 249 DRLQDNTKTHLVNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVAP 308
D + K +N +K ++ +++V+ VS +++ +I + G+E + +
Sbjct: 295 DGYEKPVKGRKINWMKAAILEAHRVLTVSPYYAQ-ELISGVDRGVELHKYLRMKTVSGII 353
Query: 309 CGFDSSTWDPSNDKFLTENYCAEDMK-GKTVCKVTLQQQLGLSKDASTIVVGCIF----S 363
G D W+PS DK++ Y + K + K LQ +GL D V+G I
Sbjct: 354 NGMDVQEWNPSTDKYIDIKYDITTVTDAKPLIKEALQAAVGLPVDRDVPVIGFIGRLEEQ 413
Query: 364 DVSDVFLENLKAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDA 423
SD+ +E + + G +Q V GT K ++ L EE G + V ++
Sbjct: 414 KGSDILVEAISKFM-GLN---VQMVILGTGKKKMEAQILEL--EEKFPGKAVGVAKFNVP 467
Query: 424 LLHLIFSGSDIILCHSFHDPLLQVPLKALKYGAAPIAVTSSDI 466
L H+I +G+D I+ S +P + L A++YG PI ++ +
Sbjct: 468 LAHMITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGL 510
Score = 76 (31.8 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 54 KNGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKY 100
+ G +I I E+ P G L + GL AL +GH V I P+Y
Sbjct: 81 EKGMSVIFIGAEVGPWSKTGGLGDVLGGLPPALAARGHRVMTICPRY 127
>UNIPROTKB|Q4KCP0 [details] [associations]
symbol:glgA "Glycogen synthase" species:220664 "Pseudomonas
protegens Pf-5" [GO:0004373 "glycogen (starch) synthase activity"
evidence=ISS] [GO:0005978 "glycogen biosynthetic process"
evidence=ISS] HAMAP:MF_00484 InterPro:IPR001296 InterPro:IPR011835
Pfam:PF00534 UniPathway:UPA00164 GO:GO:0005978 EMBL:CP000076
GenomeReviews:CP000076_GR CAZy:GT5 InterPro:IPR013534 Pfam:PF08323
eggNOG:COG0297 KO:K00703 GO:GO:0009011 TIGRFAMs:TIGR02095
ProtClustDB:PRK00654 HOGENOM:HOG000294941 RefSeq:YP_259993.2
STRING:Q4KCP0 GeneID:3477958 KEGG:pfl:PFL_2887 PATRIC:19875075
BioCyc:PFLU220664:GIX8-2901-MONOMER GO:GO:0004373 Uniprot:Q4KCP0
Length = 522
Score = 146 (56.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 52/207 (25%), Positives = 97/207 (46%)
Query: 260 VNILKGGVVYSNKVVIVSSMHSKGRIIRSLSHGLESTLAIHQDKLLVA--PCGFDSSTWD 317
++ LK G+ Y++ + VS+ +++ + GL+ LA + L++ P G D S WD
Sbjct: 241 LSFLKAGMAYASHITTVSATYAQEITTPAFGCGLDGFLASKTQQGLLSGIPNGIDES-WD 299
Query: 318 PSNDKFLTENYCAEDMKGKTVCKVTLQQQLGLSKDASTIVVGCIFSDVSD-VFLENL--- 373
+ D L + D GK ++Q GL DAS+ G +F+ VS V+ + L
Sbjct: 300 AATDAHLLTPFSIGDWDGKAANAAHVRQMFGL--DASS---GPLFAVVSRLVYQKGLDLT 354
Query: 374 KAVVRGAKMRGIQFVFTGTNKLPSASRALVSFQEELKDGIVIFVDSYDDALLHLIFSGSD 433
+AV G Q G + P +++ + I + + +++ +F+GSD
Sbjct: 355 EAVAEFIVQSGGQIAIIGRGE-PEEEQSMRALARRFPGRIGVHI-GFNETDARRMFAGSD 412
Query: 434 IILCHSFHDPLLQVPLKALKYGAAPIA 460
+L S ++P + A ++G+ P+A
Sbjct: 413 FLLMPSRYEPCGLSQMYAQRFGSLPVA 439
Score = 59 (25.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 39/156 (25%), Positives = 64/156 (41%)
Query: 55 NGFHIIHICTEMDPLVSIGSLASYVTGLSGALQRKGHLVEVILPKYACMNLDGVQGLREI 114
N ++ + +E+ LV G L L A+ H V V++P Y + L + I
Sbjct: 42 NRKRVLFVTSEIADLVKTGGLGDVSAALPRAMAHL-HDVRVLIPGYPQV-LHSENPIHII 99
Query: 115 KAECYSYFNGQLHANKIW-IGVVSGIGVTFIQPLHYSSFFNRESV-YG------YSDDFE 166
E + L A KI + + G+ V ++ L + RE YG + D+
Sbjct: 100 -GELGGH--AALPACKIGRMDMPDGL-VIYV--LICPELYEREGTPYGANNGRDWPDNHI 153
Query: 167 RFTYFSRASLDYIVKSRKQ----PDVLHIHNWETAI 198
RF A+ D I + Q PD++H H+W +
Sbjct: 154 RFARLGLAAAD-IAANLAQIHWCPDLVHAHDWPAGL 188
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 540 516 0.00088 119 3 11 22 0.37 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 624 (66 KB)
Total size of DFA: 312 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.57u 0.12s 37.69t Elapsed: 00:00:01
Total cpu time: 37.57u 0.12s 37.69t Elapsed: 00:00:02
Start: Tue May 21 09:50:01 2013 End: Tue May 21 09:50:03 2013