Query 009221
Match_columns 540
No_of_seqs 207 out of 690
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 21:34:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009221.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009221hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vuti1 g.39.1.1 (I:671-712) E 99.7 1.1E-17 7.8E-22 123.7 3.5 41 6-50 2-42 (42)
2 d3gata_ g.39.1.1 (A:) Erythroi 99.7 2E-17 1.5E-21 132.1 4.9 48 4-55 4-51 (66)
3 d1y0ja1 g.39.1.1 (A:200-238) E 99.6 2.1E-16 1.5E-20 115.1 3.5 38 4-42 2-39 (39)
4 d1pfta_ g.41.3.1 (A:) Transcri 69.2 0.75 5.4E-05 33.4 1.2 30 2-34 3-32 (50)
5 d1neea2 g.59.1.1 (A:99-135) Zi 66.3 0.86 6.3E-05 31.8 0.9 28 6-34 3-30 (37)
6 d1k81a_ g.59.1.1 (A:) Zinc-bin 52.9 0.91 6.6E-05 31.5 -0.9 28 6-34 2-29 (36)
7 d1dl6a_ g.41.3.1 (A:) Transcri 49.2 3.8 0.00028 30.4 2.1 29 3-34 10-38 (58)
8 d1twfi2 g.41.3.1 (I:50-121) RB 40.0 3.5 0.00026 31.9 0.5 38 4-41 23-66 (72)
9 d1iqca2 a.3.1.5 (A:151-308) Di 32.6 7.8 0.00057 32.9 1.6 21 312-332 113-133 (158)
10 d1dcqa2 g.45.1.1 (A:247-368) P 31.5 12 0.00088 30.5 2.6 37 3-41 14-50 (122)
11 d1tfia_ g.41.3.1 (A:) Transcri 30.3 4.1 0.0003 29.6 -0.5 34 5-38 10-49 (50)
12 d1nmla2 a.3.1.5 (A:167-326) Di 28.7 8.6 0.00063 32.7 1.2 18 314-331 116-133 (160)
13 d1qypa_ g.41.3.1 (A:) RBP9 sub 28.3 4 0.00029 30.3 -0.9 34 5-38 16-55 (57)
14 d1u5ka2 g.45.1.2 (A:81-237) Re 26.5 12 0.00085 30.8 1.7 27 5-33 71-97 (157)
15 d1eb7a2 a.3.1.5 (A:165-323) Di 25.3 10 0.00074 32.2 1.0 18 314-331 118-135 (159)
16 d1ru0a_ d.74.1.1 (A:) DcoH-lik 24.7 13 0.00096 29.3 1.6 46 314-359 3-50 (100)
17 d2j0151 g.41.8.5 (5:2-60) Ribo 24.4 12 0.00086 27.8 1.1 22 5-35 30-51 (59)
18 d2zjrz1 g.41.8.5 (Z:2-59) Ribo 23.5 8.6 0.00063 28.5 0.2 22 5-35 30-51 (58)
19 d2yrka1 g.37.1.4 (A:8-55) Zinc 21.8 11 0.0008 27.4 0.4 19 21-39 1-19 (48)
20 d1pd0a5 g.41.10.1 (A:216-300) 20.8 18 0.0013 27.8 1.6 34 2-35 11-44 (85)
21 d1qr0a1 d.150.1.1 (A:1-101) 4' 20.7 23 0.0017 27.3 2.3 25 308-332 16-40 (101)
No 1
>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}
Probab=99.66 E-value=1.1e-17 Score=123.66 Aligned_cols=41 Identities=41% Similarity=0.901 Sum_probs=38.2
Q ss_pred ccccCCCCCCCcccCCCCCCCccchhhhhhHHhcCCCCCCCCCCC
Q 009221 6 PCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHA 50 (540)
Q Consensus 6 ~CsnCgTt~TPlWRrGP~G~~tLCNACGL~~k~~G~l~~~RPLs~ 50 (540)
.|+||++++||+||+||.| .+|||||||||++||++ ||++|
T Consensus 2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k~~g~~---RP~sl 42 (42)
T d2vuti1 2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLHGVV---RPLSL 42 (42)
T ss_dssp CCSSSCCCCCSCCEECTTS-CEECHHHHHHHHHHSSC---CCCCC
T ss_pred cCCCCCCCCCccceeCCCC-CCchhhhhHHHHHcCCC---CCCCC
Confidence 6999999999999999999 57999999999999998 88875
No 2
>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=99.66 E-value=2e-17 Score=132.11 Aligned_cols=48 Identities=31% Similarity=0.669 Sum_probs=45.0
Q ss_pred CCccccCCCCCCCcccCCCCCCCccchhhhhhHHhcCCCCCCCCCCCCCCCC
Q 009221 4 QGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPD 55 (540)
Q Consensus 4 ~r~CsnCgTt~TPlWRrGP~G~~tLCNACGL~~k~~G~l~~~RPLs~r~d~i 55 (540)
...|+||+|+.||+||+||.| .+|||||||||+++++. ||+.+++++|
T Consensus 4 g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~~~~~~---RP~~~~~~~i 51 (66)
T d3gata_ 4 GTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQVN---RPLTMRKDGI 51 (66)
T ss_dssp TCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHHHHCSC---CCGGGCCSSC
T ss_pred CCCCCCCCCCCCcccccCCCC-CcccchhHHHHHHhCCc---CCcccccccc
Confidence 467999999999999999999 57999999999999997 9999999998
No 3
>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=2.1e-16 Score=115.11 Aligned_cols=38 Identities=42% Similarity=0.917 Sum_probs=35.1
Q ss_pred CCccccCCCCCCCcccCCCCCCCccchhhhhhHHhcCCC
Q 009221 4 QGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTL 42 (540)
Q Consensus 4 ~r~CsnCgTt~TPlWRrGP~G~~tLCNACGL~~k~~G~l 42 (540)
.+.|.||++++||+||+||.|. +|||||||||++||+.
T Consensus 2 ~r~C~~Cgtt~Tp~WR~gp~G~-~LCNACGl~~r~~G~n 39 (39)
T d1y0ja1 2 ARECVNCGATATPLWRRDRTGH-YLCNACGLYHKMNGQN 39 (39)
T ss_dssp CCCCSSSCCCCCSCCEECTTSC-EECSSHHHHHHHSCCC
T ss_pred cCCCCCCCCCCCcccccCCCCC-EeeHHhHHHHHHhCCC
Confidence 5789999999999999999995 6999999999999873
No 4
>d1pfta_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=69.20 E-value=0.75 Score=33.39 Aligned_cols=30 Identities=27% Similarity=0.575 Sum_probs=21.6
Q ss_pred CCCCccccCCCCCCCcccCCCCCCCccchhhhh
Q 009221 2 GKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGS 34 (540)
Q Consensus 2 Gk~r~CsnCgTt~TPlWRrGP~G~~tLCNACGL 34 (540)
-+.+.|.+|+.+. +-.+...| .++|..||+
T Consensus 3 ~~~~~Cp~Cgs~~--iv~D~~~G-e~vC~~CG~ 32 (50)
T d1pfta_ 3 NKQKVCPACESAE--LIYDPERG-EIVCAKCGY 32 (50)
T ss_dssp SSCCSCTTTSCCC--EEEETTTT-EEEESSSCC
T ss_pred cccccCcCCCCCc--EEEECCCC-eEecccCCc
Confidence 4678999999754 22334445 569999998
No 5
>d1neea2 g.59.1.1 (A:99-135) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=66.30 E-value=0.86 Score=31.79 Aligned_cols=28 Identities=32% Similarity=0.720 Sum_probs=22.5
Q ss_pred ccccCCCCCCCcccCCCCCCCccchhhhh
Q 009221 6 PCYHCGVTSTPLWRNGPPEKPVLCNACGS 34 (540)
Q Consensus 6 ~CsnCgTt~TPlWRrGP~G~~tLCNACGL 34 (540)
.|..|+...|-+-|.+-.- -.-|+|||-
T Consensus 3 ~C~~C~spDT~l~ke~R~~-~l~C~aCGa 30 (37)
T d1neea2 3 ICHECNRPDTRIIREGRIS-LLKCEACGA 30 (37)
T ss_dssp HHTCCSSCSSCCEEETTTT-EEECSTTSC
T ss_pred ECCCCCCCCCEEEEcCCEE-EEEeccCCC
Confidence 5999999999998876422 347999996
No 6
>d1k81a_ g.59.1.1 (A:) Zinc-binding domain of translation initiation factor 2 beta {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=52.89 E-value=0.91 Score=31.49 Aligned_cols=28 Identities=32% Similarity=0.757 Sum_probs=22.2
Q ss_pred ccccCCCCCCCcccCCCCCCCccchhhhh
Q 009221 6 PCYHCGVTSTPLWRNGPPEKPVLCNACGS 34 (540)
Q Consensus 6 ~CsnCgTt~TPlWRrGP~G~~tLCNACGL 34 (540)
.|..|+...|-+-+.+-.- -.-|+|||-
T Consensus 2 ~C~~C~spDT~l~ke~R~~-~l~C~aCGa 29 (36)
T d1k81a_ 2 ICRECGKPDTKIIKEGRVH-LLKCMACGA 29 (36)
T ss_dssp CCSSSCSCEEEEEEETTEE-EEEEETTTE
T ss_pred CCCCCCCCCCEEEEcCCEE-EEEeccCCC
Confidence 5999999999998875322 337999996
No 7
>d1dl6a_ g.41.3.1 (A:) Transcription initiation factor TFIIB, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.19 E-value=3.8 Score=30.38 Aligned_cols=29 Identities=14% Similarity=0.261 Sum_probs=20.1
Q ss_pred CCCccccCCCCCCCcccCCCCCCCccchhhhh
Q 009221 3 KQGPCYHCGVTSTPLWRNGPPEKPVLCNACGS 34 (540)
Q Consensus 3 k~r~CsnCgTt~TPlWRrGP~G~~tLCNACGL 34 (540)
.+..|.+|+.+. -++ +...| .++|..||+
T Consensus 10 ~~~~Cp~Cgs~~-ii~-D~~~G-e~vC~~CG~ 38 (58)
T d1dl6a_ 10 PRVTCPNHPDAI-LVE-DYRAG-DMICPECGL 38 (58)
T ss_dssp SCCSBTTBSSSC-CEE-CSSSC-CEECTTTCC
T ss_pred cccCCCCCCCCC-EEE-ECCCC-cEecccCCC
Confidence 457899999764 222 23445 469999998
No 8
>d1twfi2 g.41.3.1 (I:50-121) RBP9 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.01 E-value=3.5 Score=31.93 Aligned_cols=38 Identities=13% Similarity=0.417 Sum_probs=27.4
Q ss_pred CCccccCCCCCCCcc----cCCCCCCC--ccchhhhhhHHhcCC
Q 009221 4 QGPCYHCGVTSTPLW----RNGPPEKP--VLCNACGSRWRTKGT 41 (540)
Q Consensus 4 ~r~CsnCgTt~TPlW----RrGP~G~~--tLCNACGL~~k~~G~ 41 (540)
...|..||-...-.| |++.++.- +.|..||-+|+..+.
T Consensus 23 ~~~CpkCg~~~a~~~q~QtRsaDE~mT~Fy~C~~C~h~Wr~~~~ 66 (72)
T d1twfi2 23 DRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQK 66 (72)
T ss_dssp CCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEEECCTT
T ss_pred CCCCCCCCCCeEEEEEeecCccCCCceEEEEcCCCCCCcccccc
Confidence 468999998775544 55655522 389999999997554
No 9
>d1iqca2 a.3.1.5 (A:151-308) Di-heme cytochrome c peroxidase {Nitrosomonas europaea [TaxId: 915]}
Probab=32.63 E-value=7.8 Score=32.90 Aligned_cols=21 Identities=10% Similarity=0.275 Sum_probs=16.9
Q ss_pred HhhhcCHHHHHHHHhcCCCCC
Q 009221 312 FVGHLTHEEQQQLLKYLPLND 332 (540)
Q Consensus 312 f~~~~t~eeq~~l~k~lp~~d 332 (540)
+...||.+|+++|+.||=...
T Consensus 113 ~~~~Ls~~E~~~LvaFL~sLt 133 (158)
T d1iqca2 113 LNREFNKDEVSKIVAFLKTLT 133 (158)
T ss_dssp HCCCCCHHHHHHHHHHHHTTC
T ss_pred cCCCCCHHHHHHHHHHHHhcC
Confidence 345699999999999986653
No 10
>d1dcqa2 g.45.1.1 (A:247-368) Pyk2-associated protein beta ARF-GAP domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.54 E-value=12 Score=30.53 Aligned_cols=37 Identities=24% Similarity=0.600 Sum_probs=29.7
Q ss_pred CCCccccCCCCCCCcccCCCCCCCccchhhhhhHHhcCC
Q 009221 3 KQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 (540)
Q Consensus 3 k~r~CsnCgTt~TPlWRrGP~G~~tLCNACGL~~k~~G~ 41 (540)
....|+.|+.. .|.|-.-.-| ..+|-.|.--.|.-|+
T Consensus 14 ~N~~CaDC~~~-~p~w~s~n~G-vfvC~~CsgiHR~lg~ 50 (122)
T d1dcqa2 14 GNDVCCDCGAP-DPTWLSTNLG-ILTCIECSGIHRELGV 50 (122)
T ss_dssp TTTBCTTTCCB-SCCEEETTTT-EEECHHHHHHHHHHCT
T ss_pred CCCccCCCCCC-CCCeEEecCC-EEEchhhhHHHhcCCC
Confidence 34789999977 5789999989 6699999776666664
No 11
>d1tfia_ g.41.3.1 (A:) Transcriptional factor SII, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.31 E-value=4.1 Score=29.62 Aligned_cols=34 Identities=29% Similarity=0.694 Sum_probs=24.3
Q ss_pred CccccCCCCCCCcc----cCCCCCCC--ccchhhhhhHHh
Q 009221 5 GPCYHCGVTSTPLW----RNGPPEKP--VLCNACGSRWRT 38 (540)
Q Consensus 5 r~CsnCgTt~TPlW----RrGP~G~~--tLCNACGL~~k~ 38 (540)
-.|..|+....-.| |.+.++.- +.|+.||-+||.
T Consensus 10 ~~C~kC~~~~~~~~~~QtRSADEp~T~F~~C~~Cg~~Wr~ 49 (50)
T d1tfia_ 10 FTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 49 (50)
T ss_dssp SCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEEEC
T ss_pred EECCCCCCCccEEEEEEccCCCCCceEEEEccccCCeeec
Confidence 47999998876544 55555432 389999998863
No 12
>d1nmla2 a.3.1.5 (A:167-326) Di-heme cytochrome c peroxidase {Pseudomonas nautica [TaxId: 2743]}
Probab=28.68 E-value=8.6 Score=32.67 Aligned_cols=18 Identities=17% Similarity=0.370 Sum_probs=14.9
Q ss_pred hhcCHHHHHHHHhcCCCC
Q 009221 314 GHLTHEEQQQLLKYLPLN 331 (540)
Q Consensus 314 ~~~t~eeq~~l~k~lp~~ 331 (540)
..||++|+++|+.||=..
T Consensus 116 ~~Lt~~e~~~LvaFL~tL 133 (160)
T d1nmla2 116 TELNNDEVKSIVAFLKTL 133 (160)
T ss_dssp CCCCHHHHHHHHHHHGGG
T ss_pred cCCCHHHHHHHHHHHHHc
Confidence 459999999999998443
No 13
>d1qypa_ g.41.3.1 (A:) RBP9 subunit of RNA polymerase II {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=28.27 E-value=4 Score=30.29 Aligned_cols=34 Identities=32% Similarity=0.872 Sum_probs=25.0
Q ss_pred CccccCCCCCCCcc----cCCCCCCC--ccchhhhhhHHh
Q 009221 5 GPCYHCGVTSTPLW----RNGPPEKP--VLCNACGSRWRT 38 (540)
Q Consensus 5 r~CsnCgTt~TPlW----RrGP~G~~--tLCNACGL~~k~ 38 (540)
..|..|+-...-.| |++.+|.- ..|..||-+||-
T Consensus 16 ~~CpkC~~~~a~~~~~QtRsaDE~~T~fy~C~~Cg~~wre 55 (57)
T d1qypa_ 16 ITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS 55 (57)
T ss_dssp CCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEEC
T ss_pred CCCCCCCCCceEEEEeecccccCCCeEEEEeCCCCCccee
Confidence 57999998876655 66665532 279999998874
No 14
>d1u5ka2 g.45.1.2 (A:81-237) Recombinational repair protein RecO, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=26.49 E-value=12 Score=30.82 Aligned_cols=27 Identities=22% Similarity=0.610 Sum_probs=19.0
Q ss_pred CccccCCCCCCCcccCCCCCCCccchhhh
Q 009221 5 GPCYHCGVTSTPLWRNGPPEKPVLCNACG 33 (540)
Q Consensus 5 r~CsnCgTt~TPlWRrGP~G~~tLCNACG 33 (540)
..|..||.... .|-.-..| ..+|.+|+
T Consensus 71 ~~C~~cg~~~~-~~f~~~~G-g~~C~~c~ 97 (157)
T d1u5ka2 71 ARCARCGAPDP-EHPDPLGG-QLLCSKCA 97 (157)
T ss_dssp SBCTTTCCBSC-CEECTTTS-SEECTTTC
T ss_pred hhHhcCCCCCC-CcccccCC-eeECCCCC
Confidence 56999997654 44444445 66999996
No 15
>d1eb7a2 a.3.1.5 (A:165-323) Di-heme cytochrome c peroxidase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.30 E-value=10 Score=32.18 Aligned_cols=18 Identities=11% Similarity=0.316 Sum_probs=15.0
Q ss_pred hhcCHHHHHHHHhcCCCC
Q 009221 314 GHLTHEEQQQLLKYLPLN 331 (540)
Q Consensus 314 ~~~t~eeq~~l~k~lp~~ 331 (540)
..||.+|+.+|..||=..
T Consensus 118 ~~Ls~~e~~~LvaFL~sL 135 (159)
T d1eb7a2 118 KQLAPDDVENIVAFLHSL 135 (159)
T ss_dssp SCCCHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHhc
Confidence 469999999999997544
No 16
>d1ru0a_ d.74.1.1 (A:) DcoH-like protein DCoH2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.72 E-value=13 Score=29.27 Aligned_cols=46 Identities=22% Similarity=0.209 Sum_probs=33.3
Q ss_pred hhcCHHHHHHHHhcCC--CCCCCCCCchhhhhhchhhhhhhhhHHHHH
Q 009221 314 GHLTHEEQQQLLKYLP--LNDTTVFPDSLNSMFDSLQFKENISSFQQL 359 (540)
Q Consensus 314 ~~~t~eeq~~l~k~lp--~~d~~~~p~sl~~mf~s~qfk~n~~~fqql 359 (540)
..||+||++++|+-|+ .....+=+..|...|.=+-|.+-+.+..++
T Consensus 3 ~~Lt~~ei~~~L~~L~~~gW~~~~~~~~L~r~f~f~~f~~a~~F~~~v 50 (100)
T d1ru0a_ 3 QWLTAEERDQLIPGLKAAGWSELSERDAIYKEFSFKNFNQAFGFMSRV 50 (100)
T ss_dssp SBCCHHHHHHHHHHHHHTTCEECSSSSCEEEEEECSSHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhhCCCCCCEEECCCCeEEEEEEeCCHHHHHHHHHHH
Confidence 5699999999999884 454444456788888777777666555544
No 17
>d2j0151 g.41.8.5 (5:2-60) Ribosomal protein L32p {Thermus thermophilus [TaxId: 274]}
Probab=24.38 E-value=12 Score=27.79 Aligned_cols=22 Identities=32% Similarity=0.856 Sum_probs=14.7
Q ss_pred CccccCCCCCCCcccCCCCCCCccchhhhhh
Q 009221 5 GPCYHCGVTSTPLWRNGPPEKPVLCNACGSR 35 (540)
Q Consensus 5 r~CsnCgTt~TPlWRrGP~G~~tLCNACGL~ 35 (540)
-.|.+||...-| ..+|-.||.|
T Consensus 30 ~~C~~CG~~~~p---------HrvC~~CG~Y 51 (59)
T d2j0151 30 VPCPECKAMKPP---------HTVCPECGYY 51 (59)
T ss_dssp BCCSSSSSCBCT---------TCBCTTTCCS
T ss_pred eECCCCCCcccc---------eeECCCCCeE
Confidence 468888874333 4488889853
No 18
>d2zjrz1 g.41.8.5 (Z:2-59) Ribosomal protein L32p {Deinococcus radiodurans [TaxId: 1299]}
Probab=23.52 E-value=8.6 Score=28.54 Aligned_cols=22 Identities=23% Similarity=0.584 Sum_probs=14.2
Q ss_pred CccccCCCCCCCcccCCCCCCCccchhhhhh
Q 009221 5 GPCYHCGVTSTPLWRNGPPEKPVLCNACGSR 35 (540)
Q Consensus 5 r~CsnCgTt~TPlWRrGP~G~~tLCNACGL~ 35 (540)
-.|.+||...-| ..+|..||.|
T Consensus 30 ~~C~~CG~~~lp---------HrvC~~CG~Y 51 (58)
T d2zjrz1 30 TECPQCHGKKLS---------HHICPNCGYY 51 (58)
T ss_dssp EECTTTCCEECT---------TBCCTTTCBS
T ss_pred eECCCCCCCccc---------eeeCCCCCcC
Confidence 457788764433 3488888853
No 19
>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.76 E-value=11 Score=27.44 Aligned_cols=19 Identities=21% Similarity=0.665 Sum_probs=15.4
Q ss_pred CCCCCCccchhhhhhHHhc
Q 009221 21 GPPEKPVLCNACGSRWRTK 39 (540)
Q Consensus 21 GP~G~~tLCNACGL~~k~~ 39 (540)
||+|++.-|+-|+..|-.+
T Consensus 1 g~~gp~~eC~lC~vKYs~~ 19 (48)
T d2yrka1 1 GTDGTKPECTLCGVKYSAR 19 (48)
T ss_dssp CCCCCCSCCTTTTCCCCSS
T ss_pred CCCCCcccCcccceeeeee
Confidence 6788888999999977643
No 20
>d1pd0a5 g.41.10.1 (A:216-300) Sec24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.80 E-value=18 Score=27.84 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=27.1
Q ss_pred CCCCccccCCCCCCCcccCCCCCCCccchhhhhh
Q 009221 2 GKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSR 35 (540)
Q Consensus 2 Gk~r~CsnCgTt~TPlWRrGP~G~~tLCNACGL~ 35 (540)
|...+|..|++=--|.-+=...|....||-|+..
T Consensus 11 ~~i~RC~~C~ayiNP~~~~~~~g~~w~C~~C~~~ 44 (85)
T d1pd0a5 11 GLIVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLA 44 (85)
T ss_dssp CCCCBCSSSCCBCCTTCEEETTTTEEECTTTCCE
T ss_pred CCCccccCCcCEECCceEEeCCCCEEECCCCCcc
Confidence 3456799999988887666666778999999873
No 21
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=20.65 E-value=23 Score=27.33 Aligned_cols=25 Identities=12% Similarity=0.348 Sum_probs=20.5
Q ss_pred chHHHhhhcCHHHHHHHHhcCCCCC
Q 009221 308 NFKEFVGHLTHEEQQQLLKYLPLND 332 (540)
Q Consensus 308 nf~ef~~~~t~eeq~~l~k~lp~~d 332 (540)
.++.|+..|+++||+++.+|.=.-|
T Consensus 16 ~~~~~~~~Ls~~e~~r~~r~~~~~d 40 (101)
T d1qr0a1 16 ENERFMTFISPEKREKCRRFYHKED 40 (101)
T ss_dssp HHHHHHTTSCHHHHHHHHHCSSHHH
T ss_pred HHHHHHHHCCHHHHHHHHhhCCHHH
Confidence 4678899999999999999875544
Done!