BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009224
(540 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4A5L|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A5L|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica
pdb|4A65|A Chain A, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
pdb|4A65|B Chain B, Crystal Structure Of The Thioredoxin Reductase From
Entamoeba Histolytica With Aucn
Length = 314
Score = 311 bits (796), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 155/312 (49%), Positives = 217/312 (69%), Gaps = 5/312 (1%)
Query: 93 SVENVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVP-GGQLMTTTEVENFPGFPDG 151
++ +VVIIGSGP +LKPV++EG+ AGGV GGQL TTT +ENFPGFP+G
Sbjct: 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNG 62
Query: 152 ITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGE-RKVKCHSIVFATGATAK 210
I G +LM MR Q+E++G + E ++ +D + PF + + E ++V S++ ATGATAK
Sbjct: 63 IDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122
Query: 211 RLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLV 270
R+++P ED++W G+SACAICDGA P+F+ +VL VVGGGD A EEA++LTK+ V +L
Sbjct: 123 RMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILH 182
Query: 271 RREQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKG 330
RR+ RAS+ MQ+RV N+P I V +N+E V++ + ++G + + +GE V+ G
Sbjct: 183 RRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGD-LLNGAKIHNLVSGEYKVVPVAG 241
Query: 331 LFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGS 390
LFY IGHSPNS+ L GQV+ GY++ E KTSV+GVFA GDV D +RQA+ AAGS
Sbjct: 242 LFYAIGHSPNSKFLGGQVKTADDGYILTE--GPKTSVDGVFACGDVCDRVYRQAIVAAGS 299
Query: 391 GCIAALSVERYL 402
GC+AALS E++L
Sbjct: 300 GCMAALSCEKWL 311
>pdb|3D8X|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
pdb|3D8X|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Nadph
Dependent Thioredoxin Reductase 1
Length = 326
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 209/313 (66%), Gaps = 6/313 (1%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVP-GGQLMTTTEVENFPGFPDGITGP 155
V IIGSGP +KP+++EG A G+ GGQL TTTE+ENFPGFPDG+TG
Sbjct: 13 VTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 72
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTV----KSGERKVKCHSIVFATGATAKR 211
+LMDRMR Q+ ++G E+ E V +D+ S PF + V +I+ ATGA+AKR
Sbjct: 73 ELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 132
Query: 212 LNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVR 271
++LP E+ +W +GISACA+CDGA P+F+ + LAV+GGGD+A EEA +LTK+ V +LVR
Sbjct: 133 MHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVR 192
Query: 272 REQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGL 331
++ LRAS MQ R N I + +NT ++ + K ++ + ++ EE+ L GL
Sbjct: 193 KDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDGK-LLNALRIKNTKKNEETDLPVSGL 251
Query: 332 FYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSG 391
FY IGH+P ++++ GQV+ D +GY+ G++ TSV G FAAGDVQD ++RQA+T+AGSG
Sbjct: 252 FYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSG 311
Query: 392 CIAALSVERYLVN 404
C+AAL E+YL +
Sbjct: 312 CMAALDAEKYLTS 324
>pdb|3ITJ|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
pdb|3ITJ|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae Thioredoxin
Reductase 1 (trr1)
Length = 338
Score = 308 bits (788), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/313 (46%), Positives = 209/313 (66%), Gaps = 6/313 (1%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVP-GGQLMTTTEVENFPGFPDGITGP 155
V IIGSGP +KP+++EG A G+ GGQL TTTE+ENFPGFPDG+TG
Sbjct: 25 VTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGS 84
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTV----KSGERKVKCHSIVFATGATAKR 211
+LMDRMR Q+ ++G E+ E V +D+ S PF + V +I+ ATGA+AKR
Sbjct: 85 ELMDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144
Query: 212 LNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVR 271
++LP E+ +W +GISACA+CDGA P+F+ + LAV+GGGD+A EEA +LTK+ V +LVR
Sbjct: 145 MHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVR 204
Query: 272 REQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGL 331
++ LRAS MQ R N I + +NT ++ + K ++ + ++ EE+ L GL
Sbjct: 205 KDHLRASTIMQKRAEKNEKIEILYNTVALEAKGDGK-LLNALRIKNTKKNEETDLPVSGL 263
Query: 332 FYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSG 391
FY IGH+P ++++ GQV+ D +GY+ G++ TSV G FAAGDVQD ++RQA+T+AGSG
Sbjct: 264 FYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSG 323
Query: 392 CIAALSVERYLVN 404
C+AAL E+YL +
Sbjct: 324 CMAALDAEKYLTS 336
>pdb|1VDC|A Chain A, Structure Of Nadph Dependent Thioredoxin Reductase
Length = 333
Score = 307 bits (786), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 210/312 (67%), Gaps = 6/312 (1%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGV-PGGQLMTTTEVENFPGFPDGITGP 155
+ I+GSGP LKP++FEG+ A + PGGQL TTT+VENFPGFP+GI G
Sbjct: 11 LCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGV 70
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLP 215
+L D+ R+Q+ER+G + E V +D S PF + + + + +++ A GA AKRL+
Sbjct: 71 ELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVAKRLSFV 130
Query: 216 REDE----FWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVR 271
E FW+RGISACA+CDGA+P+F+ + LAV+GGGD+A EEA +LTK+ V+++ R
Sbjct: 131 GSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHR 190
Query: 272 REQLRASRAMQDRVFNNPNITVHFNTETVDVVSN-TKGQMSGILLRKVDTGEESVLEAKG 330
R+ RAS+ MQ R +NP I V +N+ V+ + + + G+ ++ V TG+ S L+ G
Sbjct: 191 RDAFRASKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSG 250
Query: 331 LFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGS 390
LF+ IGH P ++ L G VELDS GYV+ + GT +TSV GVFAAGDVQD ++RQA+TAAG+
Sbjct: 251 LFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGT 310
Query: 391 GCIAALSVERYL 402
GC+AAL E YL
Sbjct: 311 GCMAALDAEHYL 322
>pdb|2WHD|A Chain A, Barley Nadph-Dependent Thioredoxin Reductase 2
pdb|2WHD|B Chain B, Barley Nadph-Dependent Thioredoxin Reductase 2
Length = 351
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 203/308 (65%), Gaps = 2/308 (0%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVP-GGQLMTTTEVENFPGFPDGITGP 155
V IIGSGP LKPV+FEG+ A + GGQL TTT+VENFPGFP GI G
Sbjct: 33 VCIIGSGPAAHTAAIYAARAELKPVLFEGWMANDIAAGGQLTTTTDVENFPGFPTGIMGI 92
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLP 215
DLMD R Q+ R+G + E V +D + PF V S V ++V ATGA A+RL
Sbjct: 93 DLMDNCRAQSVRFGTNILSETVTEVDFSARPFRVTSDSTTVLADTVVVATGAVARRLYFS 152
Query: 216 REDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQL 275
D +W+RGISACA+CDGA+P+F+ + +AV+GGGD+A EE +LTK+ V+++ RR
Sbjct: 153 GSDTYWNRGISACAVCDGAAPIFRNKPIAVIGGGDSAMEEGNFLTKYGSQVYIIHRRNTF 212
Query: 276 RASRAMQDRVFNNPNITVHFNTETVD-VVSNTKGQMSGILLRKVDTGEESVLEAKGLFYG 334
RAS+ MQ R +NP I V +++E V+ G ++G+ ++ + TGE S L+ GLF+
Sbjct: 213 RASKIMQARALSNPKIQVVWDSEVVEAYGGAGGGPLAGVKVKNLVTGEVSDLQVSGLFFA 272
Query: 335 IGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSGCIA 394
IGH P ++ L GQ+EL + GYV + G+ TSVEGVFAAGDVQD ++RQA+TAAGSGC+A
Sbjct: 273 IGHEPATKFLNGQLELHADGYVATKPGSTHTSVEGVFAAGDVQDKKYRQAITAAGSGCMA 332
Query: 395 ALSVERYL 402
AL E YL
Sbjct: 333 ALDAEHYL 340
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin Reductase
Length = 335
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/317 (45%), Positives = 199/317 (62%), Gaps = 9/317 (2%)
Query: 90 AEKSVENVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFP 149
A V +V++IGSGP L P+VFEG GG LMTTT+VEN+PGF
Sbjct: 10 AHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGA----LMTTTDVENYPGFR 65
Query: 150 DGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKV-KCHSIVFATGAT 208
+GITGP+LMD MR QA R+GA+L EDVE + + +V + + + + +++ A GA
Sbjct: 66 NGITGPELMDEMREQALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAA 125
Query: 209 AKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHL 268
A+ L +P E E RG+S+CA CDG F+ Q +AV+GGGD+A EEA +LT+FAR V L
Sbjct: 126 ARYLQVPGEQELLGRGVSSCATCDGF--FFRDQDIAVIGGGDSAMEEATFLTRFARSVTL 183
Query: 269 LVRREQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEA 328
+ RR++ RAS+ M DR NN I N V V +T ++G+ +R +TG E+ L
Sbjct: 184 VHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGDTT--VTGLRVRDTNTGAETTLPV 241
Query: 329 KGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAA 388
G+F IGH P S L++ +++D GYV+V+ T TS+ GVFAAGD+ D +RQAVTAA
Sbjct: 242 TGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAA 301
Query: 389 GSGCIAALSVERYLVNN 405
GSGC AA+ ER+L +
Sbjct: 302 GSGCAAAIDAERWLAEH 318
>pdb|1CL0|A Chain A, Crystal Structure Of Reduced Thioredoxin Reductase From
Escherichia Coli
Length = 320
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 199/314 (63%), Gaps = 16/314 (5%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPD 156
++I+GSGP NL+PV+ G + GGQL TTTEVEN+PG P+ +TGP
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGME----KGGQLTTTTEVENWPGDPNDLTGPL 63
Query: 157 LMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPR 216
LM+RM A ++ E+ + + +D+++ PF + + C +++ ATGA+A+ L LP
Sbjct: 64 LMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPS 123
Query: 217 EDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLR 276
E+ F RG+SACA CDG ++ Q +AV+GGG+TA EEA+YL+ A VHL+ RR+ R
Sbjct: 124 EEAFKGRGVSACATCDGF--FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 277 ASRAMQDRVFN---NPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEE-SVLEAKGLF 332
A + + R+ + N NI +H N T++ V+ + ++G+ LR + L+ GLF
Sbjct: 182 AEKILIKRLMDKVENGNIILHTN-RTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEG----TAKTSVEGVFAAGDVQDHEWRQAVTAA 388
IGHSPN+ + +GQ+EL+ +GY+ V+ G +TS+ GVFAAGDV DH +RQA+T+A
Sbjct: 241 VAIGHSPNTAIFEGQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 389 GSGCIAALSVERYL 402
G+GC+AAL ERYL
Sbjct: 300 GTGCMAALDAERYL 313
>pdb|1TDE|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 133/314 (42%), Positives = 199/314 (63%), Gaps = 16/314 (5%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPD 156
++I+GSGP NL+PV+ G + GGQL TTTEVEN+PG P+ +TGP
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGME----KGGQLTTTTEVENWPGDPNDLTGPL 63
Query: 157 LMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPR 216
LM+RM A ++ E+ + + +D+++ PF + + C +++ ATGA+A+ L LP
Sbjct: 64 LMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPS 123
Query: 217 EDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLR 276
E+ F RG+SACA CDG ++ Q +AV+GGG+TA EEA+YL+ A VHL+ RR+ R
Sbjct: 124 EEAFKGRGVSACATCDGF--FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 277 ASRAMQDRVFN---NPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEE-SVLEAKGLF 332
A + + R+ + N NI +H N T++ V+ + ++G+ LR + L+ GLF
Sbjct: 182 AEKILIKRLMDKVENGNIILHTN-RTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEG----TAKTSVEGVFAAGDVQDHEWRQAVTAA 388
IGHSPN+ + +GQ+EL+ +GY+ V+ G +TS+ GVFAAGDV DH +RQA+T+A
Sbjct: 241 VAIGHSPNTAIFEGQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 389 GSGCIAALSVERYL 402
G+GC+AAL ERYL
Sbjct: 300 GTGCMAALDAERYL 313
>pdb|1TRB|A Chain A, Convergent Evolution Of Similar Function In Two
Structurally Divergent Enzymes
Length = 320
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 198/314 (63%), Gaps = 16/314 (5%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPD 156
++I+GSGP NL+PV+ G + GGQL TTTEVEN+PG P+ +TGP
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGME----KGGQLTTTTEVENWPGDPNDLTGPL 63
Query: 157 LMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPR 216
LM+RM A ++ E+ + + +D+++ PF + + C +++ ATGA+A+ L LP
Sbjct: 64 LMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPS 123
Query: 217 EDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLR 276
E+ F RG+SACA DG ++ Q +AV+GGG+TA EEA+YL+ A VHL+ RR+ R
Sbjct: 124 EEAFKGRGVSACATSDGF--FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 277 ASRAMQDRVFN---NPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEE-SVLEAKGLF 332
A + + R+ + N NI +H N T++ V+ + ++G+ LR + L+ GLF
Sbjct: 182 AEKILIKRLMDKVENGNIILHTN-RTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEG----TAKTSVEGVFAAGDVQDHEWRQAVTAA 388
IGHSPN+ + +GQ+EL+ +GY+ V+ G +TS+ GVFAAGDV DH +RQA+T+A
Sbjct: 241 VAIGHSPNTAIFEGQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 389 GSGCIAALSVERYL 402
G+GC+AAL ERYL
Sbjct: 300 GTGCMAALDAERYL 313
>pdb|1F6M|A Chain A, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|B Chain B, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|E Chain E, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|F Chain F, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 320
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 198/314 (63%), Gaps = 16/314 (5%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPD 156
++I+GSGP NL+PV+ G + GGQL TTTEVEN+PG P+ +TGP
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGME----KGGQLTTTTEVENWPGDPNDLTGPL 63
Query: 157 LMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPR 216
LM+RM A ++ E+ + + +D+++ PF + + C +++ ATGA+A+ L LP
Sbjct: 64 LMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPS 123
Query: 217 EDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLR 276
E+ F RG+SA A CDG ++ Q +AV+GGG+TA EEA+YL+ A VHL+ RR+ R
Sbjct: 124 EEAFKGRGVSASATCDGF--FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 277 ASRAMQDRVFN---NPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEE-SVLEAKGLF 332
A + + R+ + N NI +H N T++ V+ + ++G+ LR + L+ GLF
Sbjct: 182 AEKILIKRLMDKVENGNIILHTN-RTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEG----TAKTSVEGVFAAGDVQDHEWRQAVTAA 388
IGHSPN+ + +GQ+EL+ +GY+ V+ G +TS+ GVFAAGDV DH +RQA+T+A
Sbjct: 241 VAIGHSPNTAIFEGQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 389 GSGCIAALSVERYL 402
G+GC+AAL ERYL
Sbjct: 300 GTGCMAALDAERYL 313
>pdb|1TDF|A Chain A, Crystal Structure Of Escherichia Coli Thioredoxin
Reductase Refined At 2 Angstrom Resolution: Implications
For A Large Conformational Change During Catalysis
Length = 316
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 198/314 (63%), Gaps = 16/314 (5%)
Query: 97 VVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPD 156
++I+GSGP NL+PV+ G + GGQL TTTEVEN+PG P+ +TGP
Sbjct: 8 LLILGSGPAGYTAAVYAARANLQPVLITGME----KGGQLTTTTEVENWPGDPNDLTGPL 63
Query: 157 LMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPR 216
LM+RM A ++ E+ + + +D+++ PF + + C +++ ATGA+A+ L LP
Sbjct: 64 LMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPS 123
Query: 217 EDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLR 276
E+ F RG+SACA DG ++ Q +AV+GGG+TA EEA+YL+ A VHL+ RR+ R
Sbjct: 124 EEAFKGRGVSACATSDGF--FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181
Query: 277 ASRAMQDRVFN---NPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEE-SVLEAKGLF 332
A + + R+ + N NI +H N T++ V+ + ++G+ LR + L+ GLF
Sbjct: 182 AEKILIKRLMDKVENGNIILHTN-RTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEG----TAKTSVEGVFAAGDVQDHEWRQAVTAA 388
IGHSPN+ + +GQ+EL+ +GY+ V+ G +TS+ GVFAAGDV DH +RQA+T+A
Sbjct: 241 VAIGHSPNTAIFEGQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSA 299
Query: 389 GSGCIAALSVERYL 402
G+GC+AAL ERYL
Sbjct: 300 GTGCMAALDAERYL 313
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 185/311 (59%), Gaps = 13/311 (4%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGP 155
+VVIIG GP L ++ E G+PGGQ+ + EVENFPGFP+ I G
Sbjct: 10 DVVIIGGGPAGLTAAIYTGRAQLSTLILEK----GMPGGQIAWSEEVENFPGFPEPIAGM 65
Query: 156 DLMDRMRRQAERWGAELHQEDVEFI--DVKSN--PFTVKSGERKVKCHSIVFATGATAKR 211
+L RM +QAE++GA++ ++V+ + D S+ PFTV+ + + +++ ATGA ++
Sbjct: 66 ELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125
Query: 212 LNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVR 271
L +P ED FW +G+S CA CDG +KG+ + V+GGGD A EE ++LTKFA V ++ R
Sbjct: 126 LGIPGEDNFWGKGVSTCATCDGF--FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHR 183
Query: 272 REQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGL 331
R+ LRA++ Q R F NP + ++T ++ +SG+ LR + TGE S L G+
Sbjct: 184 RDTLRANKVAQARAFANPKMKFIWDTAVEEI--QGADSVSGVKLRNLKTGEVSELATDGV 241
Query: 332 FYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSG 391
F IGH PN+ ++ V L GYV V + T++ +FAAGDV D+ +RQ T+ G+G
Sbjct: 242 FIFIGHVPNTAFVKDTVSLRDDGYVDVRD-EIYTNIPMLFAAGDVSDYIYRQLATSVGAG 300
Query: 392 CIAALSVERYL 402
AA+ ER L
Sbjct: 301 TRAAMMTERQL 311
>pdb|4GCM|A Chain A, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
pdb|4GCM|B Chain B, Crystal Structure Of A Thioredoxine Reductase (Trxb) From
Staphylococcus Aureus Subsp. Aureus Mu50 At 1.80 A
Resolution
Length = 312
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 164/286 (57%), Gaps = 9/286 (3%)
Query: 117 NLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQED 176
NLK V E G+PGGQ T EVENFPGF + ITGPDL + A+++GA D
Sbjct: 29 NLKTVXIER----GIPGGQXANTEEVENFPGF-EXITGPDLSTKXFEHAKKFGAVYQYGD 83
Query: 177 VEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASP 236
++ ++ K + G +++ +++ ATGA K++ +P E E RG+S CA+CDGA
Sbjct: 84 IKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA-- 141
Query: 237 LFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRVFNNPNITVHFN 296
FK + L V+GGGD+A EE +LTKFA V ++ RR++LRA R +QDR F N I +
Sbjct: 142 FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIW- 200
Query: 297 TETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYV 356
+ T+ ++ G++ + L G E EA G+F IG P + + + GY+
Sbjct: 201 SHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGXKPLTAPFKDLGITNDVGYI 260
Query: 357 IVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSGCIAALSVERYL 402
+ ++ TSV G+FAAGDV+D RQ VTA G G IAA S Y+
Sbjct: 261 VTKD-DXTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYI 305
>pdb|2Q0K|A Chain A, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0K|B Chain B, Oxidized Thioredoxin Reductase From Helicobacter Pylori In
Complex With Nadp+
pdb|2Q0L|A Chain A, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|2Q0L|B Chain B, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|3ISH|A Chain A, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|B Chain B, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|C Chain C, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
Length = 311
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 167/317 (52%), Gaps = 21/317 (6%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLK-PVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITG 154
+ IIG GP +K V+FE G+PGGQ+ ++E+EN+PG + ++G
Sbjct: 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEK----GMPGGQITGSSEIENYPGVKEVVSG 58
Query: 155 PDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKV-KCHSIVFATGATAKRLN 213
D M + Q R+G + V+ + K + F + + + K + S++ ATG + KR
Sbjct: 59 LDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTG 118
Query: 214 LPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRRE 273
+ E E+W +G+S CA CDG +K + +AV+GGGDTA EEAIYL + V+L+ RR+
Sbjct: 119 IKGESEYWGKGVSTCATCDGF--FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176
Query: 274 QLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGI---LLRKVDTGEESVLEAKG 330
R + + NN I T VV KG SG+ ++ T E+ L G
Sbjct: 177 GFRCAPITLEHAKNNDKIEFL----TPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPG 232
Query: 331 LFYGIGHSPNSQLLQGQ-----VELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAV 385
F +G+ N+ +L+ + + D G ++V+ + KT+V+G+FAAGD++ +Q V
Sbjct: 233 FFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDF-SMKTNVQGLFAAGDIRIFAPKQVV 291
Query: 386 TAAGSGCIAALSVERYL 402
AA G AALSV YL
Sbjct: 292 CAASDGATAALSVISYL 308
>pdb|3F8P|A Chain A, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|B Chain B, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|C Chain C, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8P|D Chain D, Structure Of Sulfolobus Solfataricus Trxr-B3
pdb|3F8R|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
pdb|3F8R|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Thioredoxin
Reductase B3 In Complex With Two Nadp Molecules
Length = 323
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 21/314 (6%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGP 155
+V+I+G GP LK +V G PGGQL V+++ G + I
Sbjct: 17 DVIIVGLGPAAYGAALYSARYMLKTLVI-----GETPGGQLTEAGIVDDYLGLIE-IQAS 70
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGER-KVKCHSIVFATGATAKRLNL 214
D++ + E++ + + VE I+ + + F VK+ + + K S++ G ++L +
Sbjct: 71 DMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGV 130
Query: 215 PREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQ 274
P E EF RGIS C++CD +PLFK +V+AV+GGGD+A E A L+ ++ V+L+ RR+
Sbjct: 131 PGEQEFAGRGISYCSVCD--APLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188
Query: 275 LRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQ--MSGILLRKVDTGEESVLEAKGLF 332
+A + V PN+ N+ VV KG + +++ + TGE L G+F
Sbjct: 189 FKAQPIYVETVKKKPNVEFVLNS----VVKEIKGDKVVKQVVVENLKTGEIKELNVNGVF 244
Query: 333 YGIGHSPNSQLLQGQ-VELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEW---RQAVTAA 388
IG P + + +E D++GY+ V+E +TSV GVFAAGD W RQ +TA
Sbjct: 245 IEIGFDPPTDFAKSNGIETDTNGYIKVDE-WMRTSVPGVFAAGDCTSA-WLGFRQVITAV 302
Query: 389 GSGCIAALSVERYL 402
G +AA S RY+
Sbjct: 303 AQGAVAATSAYRYV 316
>pdb|3F8D|A Chain A, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|B Chain B, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|C Chain C, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
pdb|3F8D|D Chain D, Structure Of Sulfolobus Solfataricus Thioredoxin Reductase
Mutant C147a
Length = 323
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 21/314 (6%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGP 155
+V+I+G GP LK +V G PGGQL V+++ G + I
Sbjct: 17 DVIIVGLGPAAYGAALYSARYMLKTLVI-----GETPGGQLTEAGIVDDYLGLIE-IQAS 70
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGER-KVKCHSIVFATGATAKRLNL 214
D++ + E++ + + VE I+ + + F VK+ + + K S++ G ++L +
Sbjct: 71 DMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLGV 130
Query: 215 PREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQ 274
P E EF RGIS C++ D +PLFK +V+AV+GGGD+A E A L+ ++ V+L+ RR+
Sbjct: 131 PGEQEFAGRGISYCSVAD--APLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDT 188
Query: 275 LRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQ--MSGILLRKVDTGEESVLEAKGLF 332
+A + V PN+ N+ VV KG + +++ + TGE L G+F
Sbjct: 189 FKAQPIYVETVKKKPNVEFVLNS----VVKEIKGDKVVKQVVVENLKTGEIKELNVNGVF 244
Query: 333 YGIGHSPNSQLLQGQ-VELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEW---RQAVTAA 388
IG P + + +E D++GY+ V+E +TSV GVFAAGD W RQ +TA
Sbjct: 245 IEIGFDPPTDFAKSNGIETDTNGYIKVDE-WMRTSVPGVFAAGDCT-SAWLGFRQVITAV 302
Query: 389 GSGCIAALSVERYL 402
G +AA S RY+
Sbjct: 303 AQGAVAATSAYRYV 316
>pdb|3R9U|A Chain A, Thioredoxin-Disulfide Reductase From Campylobacter Jejuni.
pdb|3R9U|B Chain B, Thioredoxin-Disulfide Reductase From Campylobacter Jejuni
Length = 315
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/317 (33%), Positives = 164/317 (51%), Gaps = 21/317 (6%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLKPVV-FEGYQAGGVPGGQLMTTTEVENFPGFPDGITG 154
+V IIG GP LK VV FE G PGGQ+ +++E+EN+PG G
Sbjct: 6 DVAIIGGGPAGLSAGLYATRGGLKNVVXFEK----GXPGGQITSSSEIENYPGVAQVXDG 61
Query: 155 PDLMDRMRRQAERWGAELHQEDVEFIDVKSN-PFTVK-SGERKVKCHSIVFATGATAKRL 212
Q R+G + VE I S+ FT+K G + +++ TG+ K+
Sbjct: 62 ISFXAPWSEQCXRFGLKHEXVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKA 121
Query: 213 NLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRR 272
EDEF+ +G+S CA CDG +K + +AV+GGGDTA EEA+YL ++L+ RR
Sbjct: 122 GFKGEDEFFGKGVSTCATCDGF--FYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRR 179
Query: 273 EQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLF 332
++ RA+ + ++V N I + + +VD V K ++G+ + K+ G L G+F
Sbjct: 180 DEFRAAPSTVEKVKKNEKIEL-ITSASVDEVYGDKXGVAGVKV-KLKDGSIRDLNVPGIF 237
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEG-------TAKTSVEGVFAAGDVQDHEWRQAV 385
+G + +++L+ + DS EEG +TSV G+FAAGD++ +Q +
Sbjct: 238 TFVGLNVRNEILK---QDDSKFLCNXEEGGQVSVDLKXQTSVAGLFAAGDLRKDAPKQVI 294
Query: 386 TAAGSGCIAALSVERYL 402
AAG G +AALS Y+
Sbjct: 295 CAAGDGAVAALSAXAYI 311
>pdb|1FL2|A Chain A, Catalytic Core Component Of The Alkylhydroperoxide
Reductase Ahpf From E.Coli
Length = 310
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 155/283 (54%), Gaps = 24/283 (8%)
Query: 133 GGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSN----PFT 188
GGQ++ T ++EN+ P G L ++ + + DV+ ID +S P
Sbjct: 35 GGQILDTVDIENYISVPK-TEGQKLAGALKVHVDEY-------DVDVIDSQSASKLIPAA 86
Query: 189 VKSGERKV--------KCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKG 240
V+ G ++ K SI+ ATGA + +N+P ED++ ++G++ C CDG PLFKG
Sbjct: 87 VEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDG--PLFKG 144
Query: 241 QVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRVFNNPNITVHFNTETV 300
+ +AV+GGG++ E AI L HV LL +++A + +QD++ + N+ + N +T
Sbjct: 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTT 204
Query: 301 DVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEE 360
+V + ++ G+ R +G+ +E G+F IG PN+ L+G VE + G +I+ +
Sbjct: 205 EVKGDGS-KVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIII-D 262
Query: 361 GTAKTSVEGVFAAGDVQDHEWRQAVTAAGSGCIAALSVERYLV 403
+T+V+GVFAAGD ++Q + A G G A+LS YL+
Sbjct: 263 AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 305
>pdb|1HYU|A Chain A, Crystal Structure Of Intact Ahpf
Length = 521
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 154/287 (53%), Gaps = 24/287 (8%)
Query: 133 GGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSN----PFT 188
GGQ++ T ++EN+ P G L ++ A + DV+ ID +S P
Sbjct: 246 GGQVLDTVDIENYISVPK-TEGQKLAGALK-------AHVSDYDVDVIDSQSASKLVPAA 297
Query: 189 VKSGERKV--------KCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKG 240
+ G ++ K SI+ ATGA + +N+P ED++ ++G++ C CDG PLFKG
Sbjct: 298 TEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDG--PLFKG 355
Query: 241 QVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRVFNNPNITVHFNTETV 300
+ +AV+GGG++ E AI L HV LL +++A + +QD+V + N+ + N +T
Sbjct: 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKVRSLKNVDIILNAQTT 415
Query: 301 DVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEE 360
+V + ++ G+ R +G+ + G+F IG PN+ L+G +E + G +I+ +
Sbjct: 416 EVKGDGS-KVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIII-D 473
Query: 361 GTAKTSVEGVFAAGDVQDHEWRQAVTAAGSGCIAALSVERYLVNNNL 407
+TSV+GVFAAGD ++Q + A G G A+LS YL+ +
Sbjct: 474 AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKI 520
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin Reductase
Length = 319
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 134/269 (49%), Gaps = 7/269 (2%)
Query: 131 VPGGQLMTTTEVENFPGFPDGITGPDLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVK 190
V GG VEN+ GF I G +L A + +V I F ++
Sbjct: 49 VAGGLTAEAPLVENYLGFKS-IVGSELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIE 107
Query: 191 SGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGD 250
+ + ++ TG T K L + E E++ +G S C+ CDG LFKG+ + +GGG+
Sbjct: 108 TNDDTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDG--YLFKGKRVVTIGGGN 165
Query: 251 TATEEAIYLTKFARHVHLLVRREQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQM 310
+ AI ++++ ++V ++ + A + NI N + ++V + K ++
Sbjct: 166 SGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQEI-KKRNIPYIMNAQVTEIVGDGK-KV 223
Query: 311 SGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQ-VELDSSGYVIVEEGTAKTSVEG 369
+G+ + TGEE ++E G+F +G P + L+ V+LD GY++V+ +TSV G
Sbjct: 224 TGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDS-RQRTSVPG 282
Query: 370 VFAAGDVQDHEWRQAVTAAGSGCIAALSV 398
V+AAGDV + Q +A G GC AALS+
Sbjct: 283 VYAAGDVTSGNFAQIASAVGDGCKAALSL 311
>pdb|3AB1|A Chain A, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
pdb|3AB1|B Chain B, Crystal Structure Of Ferredoxin Nadp+ Oxidoreductase
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 129/291 (44%), Gaps = 13/291 (4%)
Query: 94 VENVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGIT 153
+ ++ IIG GP N+ + E G L + + GFP+ +
Sbjct: 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPE-VP 72
Query: 154 GPDLMDRMRRQAERWGAE--LHQEDVEFIDVKSNPFTVKSGERKV-KCHSIVFATGATA- 209
DL++ + QAER+ + L++ ++ + F ++ V + +++ A G A
Sbjct: 73 AIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAF 132
Query: 210 KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLL 269
+ LP+ S+ + FKG+ + +VGGGD+A + + L K A V L+
Sbjct: 133 EPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLV 192
Query: 270 VRREQLRASRAMQ---DRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVL 326
R + + +R N I V+ TE V + + G ++ + LR D G + +
Sbjct: 193 HRGHEFQGHGKTAHEVERARANGTIDVYLETE-VASIEESNGVLTRVHLRSSD-GSKWTV 250
Query: 327 EAKGLFYGIGHSPN-SQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDV 376
EA L IG N L + +EL + V+ + KTSV+G++AAGD+
Sbjct: 251 EADRLLILIGFKSNLGPLARWDLELYENALVV--DSHMKTSVDGLYAAGDI 299
>pdb|3LZW|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form I)
pdb|3LZX|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
pdb|3LZX|B Chain B, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
Length = 332
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 134/306 (43%), Gaps = 13/306 (4%)
Query: 91 EKSVENVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPD 150
+ V ++ IIG GP + E G L + + GFP
Sbjct: 4 DTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPK 63
Query: 151 GITGPDLMDRMRRQAERWGAELHQED-VEFIDVKSNP-FTVKSGERKVKCHSIVFATGAT 208
I +L++ ++ Q ++ + E VE ++ +++ F + + E +++ G
Sbjct: 64 -IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNG 122
Query: 209 A---KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARH 265
A ++L L +++ G + D F G+ +A++GGGD+A + A+ L A+
Sbjct: 123 AFKPRKLELENAEQY--EGKNLHYFVDDLQK-FAGRRVAILGGGDSAVDWALMLEPIAKE 179
Query: 266 VHLLVRREQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESV 325
V ++ RR++ RA + V N V+ T V + ++ ++L +V + +
Sbjct: 180 VSIIHRRDKFRAH---EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI 236
Query: 326 LEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQAV 385
LE L G + ++ LD IV + T +T++EG FAAGD+ +E + +
Sbjct: 237 LEIDDLIVNYGFVSSLGPIKNW-GLDIEKNSIVVKSTMETNIEGFFAAGDICTYEGKVNL 295
Query: 386 TAAGSG 391
A+G G
Sbjct: 296 IASGFG 301
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 188 TVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFK-----GQV 242
TV++ + K +++ A GA L++P G++A + D A+ + + G
Sbjct: 165 TVEAAGKVFKAKNLILAVGAGPGTLDVP--------GVNAKGVFDHATLVEELDYEPGST 216
Query: 243 LAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRVF-----NNPNITVHFNT 297
+ VVGG TA E + R +LVR E L+ + + R + + + +
Sbjct: 217 VVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGS 276
Query: 298 ETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELD--SSGY 355
+ + G++ ++ + E +E +F G+G P S L + LD G
Sbjct: 277 NVTRIEEDANGRVQAVV--AMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGE 334
Query: 356 VIVEEGTAKTSVEGVFAAGDVQDHEWRQAVTAAGSGCIAALSV 398
V+V E +TSV V+A GD+ + A SGC AA +V
Sbjct: 335 VLVNE-YLQTSVPNVYAVGDLIGGPM-EMFKARKSGCYAARNV 375
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI GTP + FK
Sbjct: 24 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGTPTLLLFK 83
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 84 NGEVAATKVGALSKGQLKEFLDAN 107
>pdb|2ZBW|A Chain A, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
pdb|2ZBW|B Chain B, Crystal Structure Of Thioredoxin Reductase-Like Protein
From Thermus Thermophilus Hb8
Length = 335
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 23/308 (7%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTE---VENFPGFPDGI 152
+V+I+G+GP L F PGGQL + + GFP +
Sbjct: 7 DVLIVGAGPTGLFAGFYVGXRGLS---FRFVDPLPEPGGQLTALYPEKYIYDVAGFPK-V 62
Query: 153 TGPDLMDRMRRQAERWGAELH-QEDVEFIDVKSNPFTVKSGE-RKVKCHSIVFATGATA- 209
DL+ + Q + E E ++ + + F V + + +++ A G A
Sbjct: 63 YAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAF 122
Query: 210 --KRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVH 267
+R+ P E EF RG+ A+ A F+G+ + +VGGGD+A + A+ L AR +
Sbjct: 123 EPRRIGAPGEREFEGRGVY-YAVKSKAE--FQGKRVLIVGGGDSAVDWALNLLDTARRIT 179
Query: 268 LLVRREQLRASRAMQD---RVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEES 324
L+ RR Q RA A + + V E V + + + + + + T EE
Sbjct: 180 LIHRRPQFRAHEASVKELXKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQ--TQEEL 237
Query: 325 VLEAKGLFYGIGH-SPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDHEWRQ 383
LE + G+ + L + L+ + I + T TS+ GV+A GD+ + +
Sbjct: 238 ALEVDAVLILAGYITKLGPLANWGLALEKNK--IKVDTTXATSIPGVYACGDIVTYPGKL 295
Query: 384 AVTAAGSG 391
+ G G
Sbjct: 296 PLIVLGFG 303
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 33 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 92
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 93 NGEVAATKVGALSKGQLKEFLDAN 116
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ GI G P +
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDAQDVAPKYGIRGIPTLLL 79
Query: 514 FKNKEMIRTVPGVKMKKEYREFIEAN 539
FKN E+ T G K + +EF++AN
Sbjct: 80 FKNGEVAATKVGALSKGQLKEFLDAN 105
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL + DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 30/207 (14%)
Query: 179 FIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDG--ASP 236
F+D K T++ + I+ ATG ++P G+ DG A P
Sbjct: 117 FVDAK----TLEVNGETITADHILIATGGRPSHPDIP--------GVEYGIDSDGFFALP 164
Query: 237 LFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQD----RVFNNPNI 291
+V AVVG G A E A + HL VR+ LR+ M V N
Sbjct: 165 ALPERV-AVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVMNAEGP 223
Query: 292 TVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSP---NSQLLQGQV 348
+H N VV NT G ++ L D E+V L + IG P N L V
Sbjct: 224 QLHTNAIPKAVVKNTDGSLT---LELEDGRSETV---DCLIWAIGREPANDNINLEAAGV 277
Query: 349 ELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+ + GY++V++ T++EG++A GD
Sbjct: 278 KTNEKGYIVVDK-YQNTNIEGIYAVGD 303
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N ++ T G K + +EF++AN
Sbjct: 83 NGDVAATKVGALSKGQLKEFLDAN 106
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 50.1 bits (118), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ D++ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 49.7 bits (117), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ +E+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 49.3 bits (116), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ G K + +EF++AN
Sbjct: 83 NGEVAACKVGALSKGQLKEFLDAN 106
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 48.9 bits (115), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRSIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 190 KSGERKVKCHSIVFATGATAKRLNLP--REDEFWSRGISACAICDGASPLFKGQVLAVVG 247
+ GER V + ATGA+ +P +E +W+ S A+ P + LAV+G
Sbjct: 131 EGGERVVMFDRCLVATGASPAVPPIPGLKESPYWT---STEALASDTIP----ERLAVIG 183
Query: 248 GGDTATEEAIYLTKFARHVHLLVRREQL-RASRAMQDRVFNNPNITVHFNTETVDVVSNT 306
A E A + V +L R R A+ + V T F E ++V+ +T
Sbjct: 184 SSVVALELAQAFARLGSKVTVLARNTLFFREDPAIGEAV------TAAFRAEGIEVLEHT 237
Query: 307 KG----QMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQ---GQVELDSSGYVIVE 359
+ M G + GE L A L G +PN++ L V +++ G ++++
Sbjct: 238 QASQVAHMDGEFVLTTTHGE---LRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID 294
Query: 360 EGTAKTSVEGVFAAGDVQDH 379
+G +TS ++AAGD D
Sbjct: 295 QGM-RTSNPNIYAAGDCTDQ 313
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 47.8 bits (112), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + + F++AN
Sbjct: 83 NGEVAATKVGALSKGQLKCFLDAN 106
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + IL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGP + + PIL ++ DE+ + GI G P + FK
Sbjct: 43 ILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 102
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 103 NGEVAATKVGALSKGQLKEFLDAN 126
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGP + + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CG C+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 466 GPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVPG 525
GPC+ + PIL ++ DE+ + GI G P + FKN E+ T G
Sbjct: 48 GPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVG 107
Query: 526 VKMKKEYREFIEAN 539
K + +EF++AN
Sbjct: 108 ALSKGQLKEFLDAN 121
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 456 ICVLYTSPTCG-PCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFF 514
I V + + CG PC+ + PIL ++ DE+ + GI G P + F
Sbjct: 23 ILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 82
Query: 515 KNKEMIRTVPGVKMKKEYREFIEAN 539
KN E+ T G K + +EF++AN
Sbjct: 83 KNGEVAATKVGALSKGQLKEFLDAN 107
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + + F++ N
Sbjct: 83 NGEVAATKVGALSKGQLKCFLDCN 106
>pdb|2CVJ|A Chain A, Crystal Structure Of Thioredoxin Reductase-Related Protein
Ttha0370 From Thermus Thermophilus Hb8
pdb|2YWL|A Chain A, Crystal Structure Of Thioredoxin Reductase-Related Protein
Ttha0370 From Thermus Thermophilus Hb8
pdb|2YWL|B Chain B, Crystal Structure Of Thioredoxin Reductase-Related Protein
Ttha0370 From Thermus Thermophilus Hb8
Length = 180
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 96 NVVIIGSGPXXXXXXXXXXXXNLKPVVFEGYQAGGVPGGQLMTTTEVENFPGFPDGITGP 155
+V+++G GP LK +V +G ++ ++ + V N+PG D +G
Sbjct: 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRS------KVKGVSRVPNYPGLLDEPSGE 56
Query: 156 DLMDRMRRQAERWGAELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFAT 205
+L+ R+ A R+GAE+ V+ + F V++ E K ++ T
Sbjct: 57 ELLRRLEAHARRYGAEVRPGVVKGVRDXGGVFEVETEEGVEKAERLLLCT 106
>pdb|4FK1|A Chain A, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
pdb|4FK1|B Chain B, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
pdb|4FK1|C Chain C, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
pdb|4FK1|D Chain D, Crystal Structure Of Putative Thioredoxin Reductase Trxb
From Bacillus Anthracis
Length = 304
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 17/207 (8%)
Query: 195 KVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATE 254
K ++ ATG + ++P E++ + + +C CDG K Q L ++ + T
Sbjct: 103 KYLAERVLLATGXQEEFPSIPNVREYYGKSLFSCPYCDGWE--LKDQPLIIISENEDHT- 159
Query: 255 EAIYLTKFARH--VHLLVRREQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSG 312
++ TK + L++ S+ + D + +N NI V TE++ + Q G
Sbjct: 160 --LHXTKLVYNWSTDLVIATNGNELSQTIXDEL-SNKNIPVI--TESIRTL-----QGEG 209
Query: 313 ILLRKVDTGEESVLE-AKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKTSVEGVF 371
L+KV+ +E A G PN + Q EL S+G ++++ +TS + ++
Sbjct: 210 GYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDD-FGRTSEKNIY 268
Query: 372 AAGDVQDHEWRQAVTAAGSGCIAALSV 398
AG+ + AA G AA+++
Sbjct: 269 LAGETTTQGPSSLIIAASQGNKAAIAI 295
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + CGPC+ + PIL ++ DE+ + G P + FK
Sbjct: 23 ILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYIERGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 460 YTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEM 519
+ +P CGPC+ + P+L ++ E + + V G+M P + K+ E+
Sbjct: 24 FWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEV 83
Query: 520 IRTVPGVKMKKEYREFI 536
+ T G K K+ +E +
Sbjct: 84 VETSVGFKPKEALQELV 100
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 38/84 (45%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + C C+ + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
+S + + V + +P CGPCR + PI+ ++ E++ V V GI P
Sbjct: 17 KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPT 76
Query: 511 VQFFKNKEMIRTVPGVKMKKEYREFIE 537
+ FKN +++ + G + K+ +E I+
Sbjct: 77 LLLFKNGQVVDRLVGAQPKEALKERID 103
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 191 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 245
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 246 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 305
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 306 TDDKGHIIVDE-FQNTNVKGIYAVGDV 331
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 192 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 246
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 306
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 307 TDDKGHIIVDE-FQNTNVKGIYAVGDV 332
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 193 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 247
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 248 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 307
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 308 TDDKGHIIVDE-FQNTNVKGIYAVGDV 333
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 188 TVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVL---- 243
T++ +K I+ ATG + P E + G S DG F+ + L
Sbjct: 139 TIEVSGKKYTAPHILIATGGMP---STPHESQI--PGASLGITSDG---FFQLEELPGRS 190
Query: 244 AVVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 191 VIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNXTEELENAGVEV 245
Query: 303 -----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---V 348
V K +SG+ + V G V+ + L + IG PN++ L +
Sbjct: 246 LKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDXLLWAIGRVPNTKDLSLNKLGI 305
Query: 349 ELDSSGYVIVEEGTAKTSVEGVFAAGDV 376
+ D G++IV+E T+V+G++A GDV
Sbjct: 306 QTDDKGHIIVDE-FQNTNVKGIYAVGDV 332
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 177 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 231
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 232 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 291
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 292 TDDKGHIIVDE-FQNTNVKGIYAVGDV 317
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 175 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 229
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 230 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 289
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 290 TDDKGHIIVDE-FQNTNVKGIYAVGDV 315
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 413 QPQAEEPKKDLTDRDVQEGFDITCTKHKGQYALRKLYHESPRLICVLYTSPTCGPCRTLK 472
+ + +EP K L ++ FD TK+K ++ V + + C PC L
Sbjct: 1 KEKVKEPVKHLNSKN----FDEFITKNK--------------IVVVDFWAEWCAPCLILA 42
Query: 473 PILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVPGVKMKKE 531
P++ ++ +++ + V F GIM P + FFKN E++ + G ++E
Sbjct: 43 PVIEELANDYPQ-VAFGKLNTEESQDIAMRYGIMSLPTIMFFKNGELVDQILGAVPREE 100
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 192 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 246
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 306
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 307 TDDKGHIIVDE-FQNTNVKGIYAVGDV 332
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 192 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 246
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 306
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 307 TDDKGHIIVDE-FQNTNVKGIYAVGDV 332
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 192 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 246
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 247 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 306
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 307 TDDKGHIIVDE-FQNTNVKGIYAVGDV 332
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 21/147 (14%)
Query: 245 VVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQDRVFNNPNITVHFNTETVDV- 302
+VG G A E A L+ L++R ++ LR+ +M + N T V+V
Sbjct: 175 IVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRSFDSMI-----STNCTEELENAGVEVL 229
Query: 303 ----VSNTKGQMSGILLRKVDT--GEESVL----EAKGLFYGIGHSPNSQLLQGQ---VE 349
V K +SG+ + V G V+ + L + IG PN++ L ++
Sbjct: 230 KFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQ 289
Query: 350 LDSSGYVIVEEGTAKTSVEGVFAAGDV 376
D G++IV+E T+V+G++A GDV
Sbjct: 290 TDDKGHIIVDE-FQNTNVKGIYAVGDV 315
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 37/87 (42%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
ES + V + +P CGPCR + P++ ++ E+ + + V GI P
Sbjct: 17 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPT 76
Query: 511 VQFFKNKEMIRTVPGVKMKKEYREFIE 537
+ FK + T+ G K + +E
Sbjct: 77 IMVFKGGKKCETIIGAVPKATIVQTVE 103
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%)
Query: 456 ICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFK 515
I V + + C + + PIL ++ DE+ + GI G P + FK
Sbjct: 23 ILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFK 82
Query: 516 NKEMIRTVPGVKMKKEYREFIEAN 539
N E+ T G K + +EF++AN
Sbjct: 83 NGEVAATKVGALSKGQLKEFLDAN 106
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPCR + P L + E+ + + V G+M P + ++ E+ +T+
Sbjct: 35 CGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIV 94
Query: 525 GVKMK----KEYREFI 536
G K K ++ +FI
Sbjct: 95 GAKPKAAIVRDLEDFI 110
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
ES + V + +P CGPC+ + P++ ++ E+ + I P
Sbjct: 16 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 75
Query: 511 VQFFKNKEMIRTVPGVKMKKEYREFIE 537
V FFKN E ++ G K + IE
Sbjct: 76 VLFFKNGERKESIIGAVPKSTLTDSIE 102
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
ES + V + +P CGPC+ + P++ ++ E+ + I P
Sbjct: 15 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 74
Query: 511 VQFFKNKEMIRTVPGVKMKKEYREFIE 537
V FFKN E ++ G K + IE
Sbjct: 75 VLFFKNGERKESIIGAVPKSTLTDSIE 101
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 80/210 (38%), Gaps = 36/210 (17%)
Query: 179 FIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDG--ASP 236
F+D K T++ + I+ ATG ++P G+ DG A P
Sbjct: 117 FVDAK----TLEVNGETITADHILIATGGRPSHPDIP--------GVEYGIDSDGFFALP 164
Query: 237 LFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQD--------RVFNN 288
+V AVVG G E + HL E A D V N
Sbjct: 165 ALPERV-AVVGAGYIGVELGGVINGLGAKTHLF---EMFDAPLPSFDPMISETLVEVMNA 220
Query: 289 PNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSP---NSQLLQ 345
+H N VV NT G ++ L D E+V L + IG P N L
Sbjct: 221 EGPQLHTNAIPKAVVKNTDGSLT---LELEDGRSETV---DCLIWAIGREPANDNINLEA 274
Query: 346 GQVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
V+ + GY++V++ T++EG++A GD
Sbjct: 275 AGVKTNEKGYIVVDK-YQNTNIEGIYAVGD 303
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 27/193 (13%)
Query: 194 RKVKCHSIVFATGATAKRL-NLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTA 252
++++C ++ ATG+++ L LP S S A+ A P Q L VVGGG
Sbjct: 131 QRIQCEHLLLATGSSSVELPMLPLGGPVIS---STEALAPKALP----QHLVVVGGGYIG 183
Query: 253 TEEAIYLTKFARHVHLLVRREQLRASRAMQDRVFNNP--------NITVHFNTETVDVVS 304
E I K V ++ RE++ + D P I +H
Sbjct: 184 LELGIAYRKLGAQVSVVEARERILPTY---DSELTAPVAESLKKLGIALHLG-------H 233
Query: 305 NTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQ-VELDSSGYVIVEEGTA 363
+ +G +G LL G + LEA + +G P ++ + ++L +G I +
Sbjct: 234 SVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERC 293
Query: 364 KTSVEGVFAAGDV 376
+TS+ V+A GDV
Sbjct: 294 QTSMHNVWAIGDV 306
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 460 YTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEM 519
+ +P CGP + + P+L ++ E + + V G+M P + K+ E+
Sbjct: 24 FWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEV 83
Query: 520 IRTVPGVKMKKEYREFI 536
+ T G K K+ +E +
Sbjct: 84 VETSVGFKPKEALQELV 100
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 460 YTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEM 519
+ +P CGP + + P+L ++ E + + V G+M P + K+ E+
Sbjct: 24 FWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEV 83
Query: 520 IRTVPGVKMKKEYREFI 536
+ T G K K+ +E +
Sbjct: 84 VETSVGFKPKEALQELV 100
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + TP QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDAQDVASEAEVKATPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 37.7 bits (86), Expect = 0.016, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 429 QEGFDITC-TKHKGQYALRKLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVH 487
+EG I C T L+K +ES L+ V +T+ CGPCR + P + + NV
Sbjct: 14 EEGQVIACHTVETWNEQLQKA-NESKTLVVVDFTASWCGPCRFIAPFFADLAKKL-PNVL 71
Query: 488 FVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVPGVK 527
F+ I P F K +++ V G K
Sbjct: 72 FLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAK 111
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 37.7 bits (86), Expect = 0.016, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDE-FDENVHFVXXXXXXXXXXXXXXGIMGTPCVQ 512
+++ + + + CGPC+ + P+ K+ D + V F GI P
Sbjct: 34 KVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFV 93
Query: 513 FFKNKEMIRTVPGVKMKK 530
FFKN + I TV G K
Sbjct: 94 FFKNGQKIDTVVGADPSK 111
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 37.4 bits (85), Expect = 0.020, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 460 YTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEM 519
+ +P CGPCR+ PI + E V FV I P + ++N +
Sbjct: 62 FWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIXLYRNGKX 121
Query: 520 IRTVPGVKMKKEYREFIE 537
I + G K + +++
Sbjct: 122 IDXLNGAVPKAPFDNWLD 139
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 455 LICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFF 514
L+ V + + C PCR + PIL ++ E++ + + P V F
Sbjct: 21 LVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILF 80
Query: 515 KNKEMIRTVPGVKMKKEYREFIE 537
K+ + + + G + K+ Y+ IE
Sbjct: 81 KDGQPVEVLVGAQPKRNYQAKIE 103
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 37/83 (44%)
Query: 455 LICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFF 514
L+ V + + C PCR + PIL ++ E++ + + P V F
Sbjct: 20 LVLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTAXRYRVXSIPTVILF 79
Query: 515 KNKEMIRTVPGVKMKKEYREFIE 537
K+ + + + G + K+ Y+ IE
Sbjct: 80 KDGQPVEVLVGAQPKRNYQAKIE 102
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + TP QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASECEVKCTPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 36.6 bits (83), Expect = 0.041, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPCR + P+L + + + V GIM P + FK E ++ +
Sbjct: 29 CGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLI 88
Query: 525 GVKMKKE 531
G + K++
Sbjct: 89 GYQPKEQ 95
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
RL V +T CGPC + P + +++ + V F+ I TP QF
Sbjct: 22 RLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAV-FLEVDVHQCQGTAATNNISATPTFQF 80
Query: 514 FKNKEMIRTVPG---VKMKKEYREFIE 537
F+NK I G V ++++ ++ +E
Sbjct: 81 FRNKVRIDQYQGADAVGLEEKIKQHLE 107
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 36.2 bits (82), Expect = 0.041, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPCR + P+L + + + V GIM P + FK E ++ +
Sbjct: 29 CGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGEPVKQLI 88
Query: 525 GVKMKKE 531
G + K++
Sbjct: 89 GYQPKEQ 95
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 36.2 bits (82), Expect = 0.043, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASESEVKSMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 36.2 bits (82), Expect = 0.045, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 35/87 (40%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
ES + V + +P CGP + + P++ ++ E+ + I P
Sbjct: 16 ESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPT 75
Query: 511 VQFFKNKEMIRTVPGVKMKKEYREFIE 537
V FFKN E ++ G K + IE
Sbjct: 76 VLFFKNGERKESIIGAVPKSTLTDSIE 102
>pdb|3OC4|A Chain A, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
pdb|3OC4|B Chain B, Crystal Structure Of A Pyridine Nucleotide-Disulfide
Family Oxidoreductase From The Enterococcus Faecalis
V583
Length = 452
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 99/230 (43%), Gaps = 29/230 (12%)
Query: 159 DRMRRQAERWGAELHQEDVEFIDVKSN--PFTVKSGERKVKCHSIVFATGAT--AKRLNL 214
+ +RRQ + L +V DV++ +T K ++ ++ ATGA+ + ++
Sbjct: 66 EELRRQKIQL---LLNREVVAXDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRG 122
Query: 215 PREDEFWSRGISACAICDGASPLFK-GQVLAVVGGGDTATEEAIYLTKFARHVHLLVRRE 273
+ ++ + A+ A PL + Q +AV+G G E +L K + VH+ E
Sbjct: 123 SQTEKLLKYKFLSGAL--AAVPLLENSQTVAVIGAGPIGXEAIDFLVKXKKTVHVFESLE 180
Query: 274 QL------RASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLE 327
L + A + + HF ETV + T +GI+L +T E+ +
Sbjct: 181 NLLPKYFDKEXVAEVQKSLEKQAVIFHFE-ETVLGIEETA---NGIVL---ETSEQEISC 233
Query: 328 AKGLFYGIGHSPNSQLLQGQVE--LDSSGYVIVEEGTAKTSVEGVFAAGD 375
G+F + P L +++ LD + I + +TSV VFA GD
Sbjct: 234 DSGIF-ALNLHPQLAYLDKKIQRNLDQT---IAVDAYLQTSVPNVFAIGD 279
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 35.8 bits (81), Expect = 0.061, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASECEVKSMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 35.8 bits (81), Expect = 0.064, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDXQDVASEXEVKCMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 35.8 bits (81), Expect = 0.066, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
+ P I +++T C PC+ +KP ++ + + ++ F I P
Sbjct: 15 QHPDPIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDAEKTMAELNIRTLPS 74
Query: 511 VQFFKNKEMIRTV-PGVKMKKEYREFIEAN 539
+ F + MIR V G K + R +I N
Sbjct: 75 LALFVDG-MIREVFSGTMNKSDLRYWINNN 103
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 173 HQEDVEFIDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDEFWSRGISAC 228
HQ V +D ++ VK + E K + + ++ TG+ +P D S + C
Sbjct: 79 HQ--VTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGID---SSRVYLC 133
Query: 229 AICDGASPLF----KGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDR 284
+ A LF K + + ++G G E A + +V+L+ E R D+
Sbjct: 134 KNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE--RVLYKYFDK 191
Query: 285 VFNNPNITVHFNTETVDVVSNTK----GQMSGILLRKVDTGEESVLEAKGLFYGIGHSPN 340
F + + + V++V +K ++ ++ K G+E +++ IG PN
Sbjct: 192 EFTDI-LAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKE--IKSDIAILCIGFRPN 248
Query: 341 SQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
++LL+G+V + +G +I +E +S +FAAGD
Sbjct: 249 TELLKGKVAMLDNGAIITDE-YMHSSNRDIFAAGD 282
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 35.4 bits (80), Expect = 0.083, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASEXEVKCMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 448 LYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMG 507
L E P L V + + CGPC+ + P++ + + + + V + G
Sbjct: 22 LKAEQPVL--VYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEG 79
Query: 508 TPCVQFFKNKEMIRTVPGVKMKKEYREFIE 537
P ++ K ++++ + GV K + F++
Sbjct: 80 VPALRLVKGEQILDSTEGVISKDKLLSFLD 109
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 35.0 bits (79), Expect = 0.095, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 447 KLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIM 506
+L S +L+ + + + CGPC+ + P L ++ +F +NV + I
Sbjct: 19 QLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNIS 78
Query: 507 GTPCVQFFKNKEMIRTVPGVKMKKEYREFIEAN 539
P F KN + G K+ + I+AN
Sbjct: 79 SMPTFVFLKNGVKVEEFAGANAKR-LEDVIKAN 110
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 35.0 bits (79), Expect = 0.095, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 447 KLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIM 506
+L S +L+ + + + CGPC+ + P L ++ +F +NV + I
Sbjct: 14 QLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNIS 73
Query: 507 GTPCVQFFKNKEMIRTVPGVKMKKEYREFIEAN 539
P F KN + G K+ + I+AN
Sbjct: 74 SMPTFVFLKNGVKVEEFAGANAKR-LEDVIKAN 105
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 35.0 bits (79), Expect = 0.096, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVNDCQDVASECEVKCMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 35.0 bits (79), Expect = 0.099, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGP + +KP + +++ NV F+ + TP QF
Sbjct: 21 KLVVVDFSATWCGPAKMIKPFFHSLSEKY-SNVIFLEVDVDDAQDVASEAEVKATPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGPC+ +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASECEVKCMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 179 FIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLF 238
F+D + +KSGER + + V A G + ++P E+ GI+ + LF
Sbjct: 132 FVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEY---GIT-------SDDLF 181
Query: 239 K-----GQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRA---------SRAMQDR 284
G+ L VVG G E A +L ++VR LR + +M++R
Sbjct: 182 SLDREPGKTL-VVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEER 240
Query: 285 VFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLL 344
TV + E D G++ + + V+TGEES + + IG + L
Sbjct: 241 GIPFLRKTVPLSVEKQD-----DGKLL-VKYKNVETGEESEDVYDTVLWAIGR----KGL 290
Query: 345 QGQVELDSSGYVIVE-----EGTAKTSVEGVFAAGDV 376
+ L ++G + + + T+V ++A GD+
Sbjct: 291 VDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDI 327
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 179 FIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLF 238
F+D + +KSGER + + V A G + ++P E+ GI+ + LF
Sbjct: 128 FVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEY---GIT-------SDDLF 177
Query: 239 K-----GQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRA---------SRAMQDR 284
G+ L VVG G E A +L ++VR LR + +M++R
Sbjct: 178 SLDREPGKTL-VVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEER 236
Query: 285 VFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLL 344
TV + E D G++ + + V+TGEES + + IG + L
Sbjct: 237 GIPFLRKTVPLSVEKQD-----DGKLL-VKYKNVETGEESEDVYDTVLWAIGR----KGL 286
Query: 345 QGQVELDSSGYVIVE-----EGTAKTSVEGVFAAGDV 376
+ L ++G + + + T+V ++A GD+
Sbjct: 287 VDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDI 323
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 40/217 (18%)
Query: 179 FIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASPLF 238
F+D + +KSGER + + V A G + ++P E+ GI+ + LF
Sbjct: 132 FVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGAVEY---GIT-------SDDLF 181
Query: 239 K-----GQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRA---------SRAMQDR 284
G+ L VVG G E A +L ++VR LR + +M++R
Sbjct: 182 SLDREPGKTL-VVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEER 240
Query: 285 VFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLL 344
TV + E D G++ + + V+TGEES + + IG + L
Sbjct: 241 GIPFLRKTVPLSVEKQD-----DGKLL-VKYKNVETGEESEDVYDTVLWAIGR----KGL 290
Query: 345 QGQVELDSSGYVIVE-----EGTAKTSVEGVFAAGDV 376
+ L ++G + + + T+V ++A GD+
Sbjct: 291 VDDLNLPNAGVTVQKDKIPVDSQEATNVANIYAVGDI 327
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 444 ALRKLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXX 503
AL E+P L+ V + + CGPC+ L IL I E +++V F+
Sbjct: 14 ALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPS-IAEANKDVTFIKVDVDKNGNAADAY 72
Query: 504 GIMGTPCVQFFKNKE 518
G+ P + FF KE
Sbjct: 73 GVSSIPAL-FFVKKE 86
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPCR + P+L + + + V GIM P + FK ++ +
Sbjct: 29 CGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLI 88
Query: 525 GVKMKKE 531
G + K++
Sbjct: 89 GYQPKEQ 95
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPCR + P+L + + + V GIM P + FK ++ +
Sbjct: 29 CGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLI 88
Query: 525 GVKMKKE 531
G + K++
Sbjct: 89 GYQPKEQ 95
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 450 HESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTP 509
+E + V + + CGPC+ + PIL ++ E+D + GI P
Sbjct: 35 YEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIP 94
Query: 510 CVQFFK---NKEMIR-TVPGVKMKKEYREFI 536
+ F EM + +P KK EF+
Sbjct: 95 SILFIPMEGKPEMAQGAMPKASFKKAIDEFL 125
>pdb|3KLJ|A Chain A, Crystal Structure Of Nadh:rubredoxin Oxidoreductase From
Clostridium Acetobutylicum
Length = 385
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 180 IDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWS 222
ID + T+KSGE K+K ++ A+G+ A ++ +P DE +S
Sbjct: 88 IDPNNKLVTLKSGE-KIKYEKLIIASGSIANKIKVPHADEIFS 129
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/84 (20%), Positives = 35/84 (41%)
Query: 455 LICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFF 514
L+ V + + CGPC+ + P LG++ EF V + P +
Sbjct: 22 LVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81
Query: 515 KNKEMIRTVPGVKMKKEYREFIEA 538
++ ++I G K + + ++E+
Sbjct: 82 RDGKVIDKKVGALPKSQLKAWVES 105
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
C PC L PI+ ++ +++ + V F G+M P V FFK+ E + +
Sbjct: 28 CAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPVDEII 86
Query: 525 GVKMKKE 531
G ++E
Sbjct: 87 GAVPREE 93
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 33.9 bits (76), Expect = 0.26, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
++ +L+ + +T+ CGPCR + P+ + +F + F+ + P
Sbjct: 26 DTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAI-FLKVDVDELKDVAEAYNVEAMPT 84
Query: 511 VQFFKNKEMIRTVPG 525
F K+ E + +V G
Sbjct: 85 FLFIKDGEKVDSVVG 99
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 33.5 bits (75), Expect = 0.27, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V + + CGPC+T+ P+ ++ +++D FV I P
Sbjct: 25 KLVVVDFFATWCGPCKTIAPLFKELSEKYD--AIFVKVDVDKLEETARKYNISAMPTFIA 82
Query: 514 FKNKEMIRTVPGVKMKK 530
KN E + V G + K
Sbjct: 83 IKNGEKVGDVVGASIAK 99
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V + + CGPC+T+ P+ ++ +++D FV I P
Sbjct: 34 KLVVVDFFATWCGPCKTIAPLFKELSEKYD--AIFVKVDVDKLEETARKYNISAMPTFIA 91
Query: 514 FKNKEMIRTVPGVKMKK 530
KN E + V G + K
Sbjct: 92 IKNGEKVGDVVGASIAK 108
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 171 ELHQEDVEFIDVKSNPFTVKSGE--RKVKCHSIVFATGATAKRLNLPREDEFWSRGISAC 228
E+ + + F+D +N V +G+ + + + ATG+ + + LP +F +R
Sbjct: 107 EIVKGEAYFVD--ANTVRVVNGDSAQTYTFKNAIIATGS--RPIELPN-FKFSNR----- 156
Query: 229 AICDGASPLFKGQV---LAVVGGGDTATEEAIYLTKFARHVHLLVRREQLRASRAMQDRV 285
I D L G+V L V+GGG E F V +L ++ + Q
Sbjct: 157 -ILDSTGALNLGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSGFEKQMAA 215
Query: 286 FNNPNITVHFNTETVDVVSNT--KG---QMSGILLRKVDTGEESVLEAKGLFYGIGHSPN 340
I + V+VV+N KG + G+ + GE ++A + +G PN
Sbjct: 216 I----IKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271
Query: 341 SQLL---QGQVELDSSGYVIVEEGTAKTSVEGVFAAGDV 376
+ L Q +++ + G + V++ +TSV +FA GD+
Sbjct: 272 TDELGLEQIGIKMTNRGLIEVDQ-QCRTSVPNIFAIGDI 309
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 33.1 bits (74), Expect = 0.36, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 452 SPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCV 511
S +LI V +T+ C PC+ + PI ++ +F NV F+ + P
Sbjct: 25 SQKLIVVDFTASWCPPCKMIAPIFAELAKKF-PNVTFLKVDVDELKAVAEEWNVEAMPTF 83
Query: 512 QFFKNKEMIRTVPG 525
F K+ +++ G
Sbjct: 84 IFLKDGKLVDKTVG 97
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPC+ + PIL ++ E+ ++ GI G P + F K +
Sbjct: 63 CGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQGIPTIWFVPMKGEPQVNM 122
Query: 525 GVKMKKEYREFIE 537
G K++ + +I+
Sbjct: 123 GALSKEQLKGYID 135
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 445 LRKLYHESP-RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXX 503
L KL +E+ RLI V + + CGPCR + P + + E E V F
Sbjct: 10 LEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPE-VEFAKVDVDQNEEAAAKY 68
Query: 504 GIMGTPCVQFFKNKEMIRTVPGVKMKKEYREFIEANK 540
+ P F K+ + + G K RE I +K
Sbjct: 69 SVTAMPTFVFIKDGKEVDRFSGANETK-LRETITRHK 104
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 33.1 bits (74), Expect = 0.42, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
E + I V +T+ CGPC+ + P+ + +++ V F+ GI P
Sbjct: 22 EEHKPIVVAFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPT 81
Query: 511 VQFFKN 516
+K+
Sbjct: 82 FHVYKD 87
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGP + +KP + +++ NV F+ + P QF
Sbjct: 32 KLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASECEVKSMPTFQF 90
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 91 FKKGQKVGEFSGANKEK 107
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 273 EQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLF 332
EQLRA N N+ H N V N G + ++G E+ + +
Sbjct: 240 EQLRA---------NGINVRTHENP--AKVTKNADGTRHVVF----ESGAEADYDV--VM 282
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEGT------AKTSVEGVFAAGDVQD 378
IG P SQ LQ LD +G + + G +KT+V+ ++A GDV D
Sbjct: 283 LAIGRVPRSQTLQ----LDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTD 330
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 32.7 bits (73), Expect = 0.54, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGP + +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDDSQDVASESEVKSMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 27/112 (24%)
Query: 273 EQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLF 332
EQLRA N N+ H N V N G + ++G E+ + +
Sbjct: 240 EQLRA---------NGINVRTHENP--AKVTKNADGTRHVVF----ESGAEADYDV--VM 282
Query: 333 YGIGHSPNSQLLQGQVELDSSGYVIVEEGT------AKTSVEGVFAAGDVQD 378
IG P SQ LQ LD +G + + G +KT+V+ ++A GDV D
Sbjct: 283 LAIGRVPRSQTLQ----LDKAGVEVAKNGAIKVDAYSKTNVDNIYAIGDVTD 330
>pdb|3KD9|A Chain A, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|B Chain B, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
pdb|3KD9|C Chain C, Crystal Structure Of Pyridine Nucleotide Disulfide
Oxidoreductase From Pyrococcus Horikoshii
Length = 449
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 170 AELHQEDVEFIDVKSNPFTVKSGERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACA 229
AE+ + D ++ V+ N GE+ + +VFA GA+ + +P + +G+
Sbjct: 80 AEVIEVDTGYVRVREN-----GGEKSYEWDYLVFANGASPQ---VPAIEGVNLKGVFTAD 131
Query: 230 ICDGASPL------FKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRREQ-LRASRAMQ 282
+ A + +K + + ++GGG E A ++V ++VR E+ LR S +
Sbjct: 132 LPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKE 191
Query: 283 DRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKV--DTGEESVLEAKGLFYGIGHSPN 340
+ H N ++ +G+ + KV D GE +A+ + G PN
Sbjct: 192 VTDILEEKLKKHVNLRLQEITMKIEGEER---VEKVVTDAGE---YKAELVILATGIKPN 245
Query: 341 SQLL-QGQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQD 378
+L Q V + +G + E +TSVE V+AAGDV +
Sbjct: 246 IELAKQLGVRIGETGAIWTNE-KMQTSVENVYAAGDVAE 283
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 32.7 bits (73), Expect = 0.58, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 35/80 (43%)
Query: 458 VLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNK 517
V + + CGPC+ + P+L ++ +++ + +M P + FK+
Sbjct: 24 VDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDG 83
Query: 518 EMIRTVPGVKMKKEYREFIE 537
+ + V G + K+ E ++
Sbjct: 84 QPVDKVVGFQPKENLAEVLD 103
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 32.3 bits (72), Expect = 0.62, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 32/73 (43%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPC+ + P+L ++ +++ + +M P + FK+ + + V
Sbjct: 32 CGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVV 91
Query: 525 GVKMKKEYREFIE 537
G + K+ E ++
Sbjct: 92 GFQPKENLAEVLD 104
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 32.3 bits (72), Expect = 0.72, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
E + I V +T+ CGPC+ + P+ + +++ V F+ GI P
Sbjct: 22 EEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPT 81
Query: 511 VQFFKN 516
+K+
Sbjct: 82 FHVYKD 87
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 273 EQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLF 332
EQLRA N N+ H N V N G + ++G E+ + +
Sbjct: 239 EQLRA---------NGINVRTHENP--AKVTKNADGTRHVVF----ESGAEADYDV--VM 281
Query: 333 YGIGHSPNSQLLQ---GQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQD 378
IG P SQ LQ VE+ +G + V+ +KT+V+ ++A GDV D
Sbjct: 282 LAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIYAIGDVTD 329
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 21/109 (19%)
Query: 273 EQLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLF 332
EQLRA N N+ H N V N G + ++G E+ + +
Sbjct: 239 EQLRA---------NGINVRTHENP--AKVTKNADGTRHVVF----ESGAEADYDV--VM 281
Query: 333 YGIGHSPNSQLLQ---GQVELDSSGYVIVEEGTAKTSVEGVFAAGDVQD 378
IG P SQ LQ VE+ +G + V+ +KT+V+ ++A GDV D
Sbjct: 282 LAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIYAIGDVTD 329
>pdb|2GUY|A Chain A, Orthorhombic Crystal Structure (Space Group P21212) Of
Aspergillus Niger Alpha-Amylase At 1.6 A Resolution
pdb|2GVY|A Chain A, Monoclinic Crystal Form Of Aspergillus Niger Alpha-Amylase
In Complex With Maltose At 1.8 A Resolution
pdb|2GVY|B Chain B, Monoclinic Crystal Form Of Aspergillus Niger Alpha-Amylase
In Complex With Maltose At 1.8 A Resolution
pdb|6TAA|A Chain A, Structure And Molecular Model Refinement Of Aspergillus
Oryzae (Taka) Alpha-Amylase: An Application Of The
Simulated-Annealing Method
pdb|7TAA|A Chain A, Family 13 Alpha Amylase In Complex With Acarbose
pdb|3KWX|A Chain A, Chemically Modified Taka Alpha-Amylase
Length = 478
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 232 DGASPLFKGQVLAVVGGGDTATEEAIYLTKF---ARHVHLLVRREQLRASRAMQDRVF-N 287
DG ++ GQ GG D A EA +L+ + + L+ +R +D F
Sbjct: 322 DGIPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381
Query: 288 NPNITVHFNTETVDVVSNTKG-QMSGILLRKVDTGEESVLEAKGLFYGIGH 337
N ++ + T+ + T G Q+ IL K +G+ L G Y G
Sbjct: 382 YKNWPIYKDDTTIAMRKGTDGSQIVTILSNKGASGDSYTLSLSGAGYTAGQ 432
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 21/213 (9%)
Query: 178 EFIDVKSNPFTVKSGE-RKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICDGASP 236
E + + TVK G+ ++ +++ATG +RL+ D G+ A + A
Sbjct: 87 EVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGAD---LAGVHAVRTKEDADR 143
Query: 237 LFK-----GQVLAVVGGGDTATEEAIYLTKFARHVHLL--VRREQLRASRAMQDRVFNNP 289
L + V+GGG E A LTKF +V LL + R R + +
Sbjct: 144 LMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAE 203
Query: 290 NITVHFNTET---VDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
+ + T +D + +++G+ ++ + SV+ A + GIG P L
Sbjct: 204 HRAHGVDLRTGAAMDCIEGDGTKVTGVRMQ-----DGSVIPADIVIVGIGIVPCVGALIS 258
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGDVQDH 379
+G V V+E +TS+ V+A GD H
Sbjct: 259 AGASGGNG-VDVDE-FCRTSLTDVYAIGDCAAH 289
>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia
Breweri And Petunia Hybrida Represent Two Distinct
Lineages
pdb|3C3X|B Chain B, The Multiple Phenylpropene Synthases In Both Clarkia
Breweri And Petunia Hybrida Represent Two Distinct
Lineages
Length = 318
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 322 EESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGTAKT-------SVEGVFAAG 374
EE+ +++K L +G + +++G ++L YV ++KT S+ + G
Sbjct: 6 EENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKG 65
Query: 375 DVQDHEWRQAVTAAGSGCIAALSVERYL 402
++ +HE + I+AL+V +YL
Sbjct: 66 ELDEHEKLVELMKKVDVVISALAVPQYL 93
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 31/151 (20%)
Query: 243 LAVVGGGDTATEEAIYLTKFARHVHLLVRREQL-------------RASRAMQDRVFNNP 289
+ ++GGG E A + + V ++ R + + + + + N
Sbjct: 189 VTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNE 248
Query: 290 NITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG-QV 348
N+ E V+ V KG L+ +G PN+ L+G +
Sbjct: 249 NVKAFKGNERVEAVETDKGTYKADLV----------------LVSVGVKPNTDFLEGTNI 292
Query: 349 ELDSSGYVIVEEGTAKTSVEGVFAAGDVQDH 379
+ G + V +T+V+ V+AAGD H
Sbjct: 293 RTNHKGAIEVN-AYMQTNVQDVYAAGDCATH 322
>pdb|3HZ4|A Chain A, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
pdb|3HZ4|B Chain B, Crystal Structure Of Thioredoxin From Methanosarcina Mazei
Length = 140
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 451 ESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPC 510
+S + + V + SP C C+ +P + E+ + F G+ GTP
Sbjct: 22 DSKKPVVVXFYSPACPYCKAXEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPT 81
Query: 511 VQFF 514
+FF
Sbjct: 82 FKFF 85
>pdb|3L8K|A Chain A, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
pdb|3L8K|B Chain B, Crystal Structure Of A Dihydrolipoyl Dehydrogenase From
Sulfolobus Solfataricus
Length = 466
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 24/194 (12%)
Query: 193 ERKVKCHSIVFATGATAKRLNLPREDEFWSRGISACAICD---GASPLFKG--QVLAVVG 247
E + + ++ A+GA +L LP G+ C D G F+ Q + ++G
Sbjct: 128 EIEAETRYMIIASGAETAKLRLP--------GVEYCLTSDDIFGYKTSFRKLPQDMVIIG 179
Query: 248 GGDTATEEAIYLTKFARHVHLLVRREQL-RASRAMQDRVFNNP-----NITVHFNTETVD 301
G E A H++ E L RA ++D+ N + + FN+ +
Sbjct: 180 AGYIGLEIASIFRLMGVQTHII---EMLDRALITLEDQDIVNTLLSILKLNIKFNSPVTE 236
Query: 302 VVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEG 361
V K ++ D ++S+ + G P ++ L S IV +
Sbjct: 237 V-KKIKDDEYEVIYSTKDGSKKSIF-TNSVVLAAGRRPVIPEGAREIGLSISKTGIVVDE 294
Query: 362 TAKTSVEGVFAAGD 375
T KT++ VFA GD
Sbjct: 295 TMKTNIPNVFATGD 308
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 31.2 bits (69), Expect = 1.4, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 452 SPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENV 486
+ +L+ + +T+ CGPCR + P+ + +F V
Sbjct: 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAV 67
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 295 FNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQ---VELD 351
F +T V +T G + + GE++++EA + G +P + L VE D
Sbjct: 235 FKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETD 294
Query: 352 SSGYVIVEEGTAKTSVEGVFAAGDV 376
G ++V E T+V GV+A GDV
Sbjct: 295 KLGRILVNE-RFSTNVSGVYAIGDV 318
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Query: 446 RKLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGI 505
++L +L+ + + + CGPC+ + P L ++ + V F+ I
Sbjct: 13 KQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVV-FLKVDVDECEDIAQDNQI 71
Query: 506 MGTPCVQFFKNKEMIRTVPGVKMKKEYREFIEANK 540
P F KN + + ++ G K E +E NK
Sbjct: 72 ACMPTFLFMKNGQKLDSLSGANYDK-LLELVEKNK 105
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 31/151 (20%)
Query: 243 LAVVGGGDTATEEAIYLTKFARHVHLLVRREQL-------------RASRAMQDRVFNNP 289
+ ++GGG E A + + V + R + + + + + N
Sbjct: 189 VTIIGGGAIGLEXAETFVELGKKVRXIERNDHIGTIYDGDXAEYIYKEADKHHIEILTNE 248
Query: 290 NITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG-QV 348
N+ E V+ V KG L+ +G PN+ L+G +
Sbjct: 249 NVKAFKGNERVEAVETDKGTYKADLV----------------LVSVGVKPNTDFLEGTNI 292
Query: 349 ELDSSGYVIVEEGTAKTSVEGVFAAGDVQDH 379
+ G + V +T+V+ V+AAGD H
Sbjct: 293 RTNHKGAIEVN-AYXQTNVQDVYAAGDCATH 322
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 308 GQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQ---LLQGQVELDSSGYVIVEEGTAK 364
G + + V GE + L+A+ + G P++ L + V LDS G V ++ +
Sbjct: 269 GDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDR-HFQ 327
Query: 365 TSVEGVFAAGDV 376
TS+ GV+A GDV
Sbjct: 328 TSIAGVYAIGDV 339
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 435 TCTKHKGQYALRKLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFV 489
+ TK R L ++ +L+ Y + CGPC+ ++P L K+I + +V FV
Sbjct: 13 SITKLTNLTEFRNLIKQNDKLVIDFYAT-WCGPCKMMQPHLTKLIQAY-PDVRFV 65
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 72/195 (36%), Gaps = 37/195 (18%)
Query: 201 IVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLT 260
I+ ATG+ RL +P DEF A + D + VGGG A E A
Sbjct: 176 ILIATGSWPTRLGVPG-DEFCITSNEAFYLEDAPKRML------CVGGGYIAVEFAGIFN 228
Query: 261 KF---ARHVHLLVRRE--------QLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQ 309
+ +V L R + ++R S Q I V N + N G
Sbjct: 229 GYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQ---LGANGIRVRTNLNPTKITKNEDGS 285
Query: 310 MSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGT------A 363
V + + + + IG P SQ LQ LD +G + G +
Sbjct: 286 ------NHVHFNDGTEEDYDQVMLAIGRVPRSQALQ----LDKAGVRTGKNGAVQVDAYS 335
Query: 364 KTSVEGVFAAGDVQD 378
KTSV+ ++A GDV +
Sbjct: 336 KTSVDNIYAIGDVTN 350
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V +++ CGP + +KP + +++ NV F+ + P QF
Sbjct: 21 KLVVVDFSATWCGPSKMIKPFFHSLSEKY-SNVIFLEVDVDDCQDVASECEVKRMPTFQF 79
Query: 514 FKNKEMIRTVPGVKMKK 530
FK + + G +K
Sbjct: 80 FKKGQKVGEFSGANKEK 96
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 331 LFYGIGHSP-NSQLLQGQ--VELDSSGYVIVEEGTAKTSVEGVFAAGDV 376
L +G P + LL V LD G++ V++ KTSV GVFA GDV
Sbjct: 272 LIVAVGRRPVTTDLLAADSGVTLDERGFIYVDD-HCKTSVPGVFAIGDV 319
>pdb|2TAA|A Chain A, Structure And Possible Catalytic Residues Of Taka-Amylase
A
pdb|2TAA|B Chain B, Structure And Possible Catalytic Residues Of Taka-Amylase
A
pdb|2TAA|C Chain C, Structure And Possible Catalytic Residues Of Taka-Amylase
A
Length = 478
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 232 DGASPLFKGQVLAVVGGGDTATEEAIYLTKF---ARHVHLLVRREQLRASRAMQDR---V 285
DG ++ GQ GG D A EA +L+ + + L+ +R +D
Sbjct: 322 DGLPIIYAGQEQHYAGGNDPANREATWLSGYPTDSELYKLIASANAIRNYAISKDTGFVT 381
Query: 286 FNNPNITVHFNTETVDVVSNTKG-QMSGILLRKVDTGEESVLEAKGLFYGIGH 337
+ NP I + T+ + T G Q+ IL K +G+ L G Y G
Sbjct: 382 YKNPYIK---DDTTIAMRKGTDGSQIVTILSNKGASGDSYTLSLSGASYTAGQ 431
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 72/195 (36%), Gaps = 37/195 (18%)
Query: 201 IVFATGATAKRLNLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLT 260
I+ ATG+ RL +P DEF A + D + VGGG A E A
Sbjct: 176 ILIATGSWPTRLGVPG-DEFCITSNEAFYLEDAPKRML------CVGGGYIAVEFAGIFN 228
Query: 261 KF---ARHVHLLVRRE--------QLRASRAMQDRVFNNPNITVHFNTETVDVVSNTKGQ 309
+ +V L R + ++R S Q I V N + N G
Sbjct: 229 GYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQ---LGANGIRVRTNLNPTKITKNEDGS 285
Query: 310 MSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQGQVELDSSGYVIVEEGT------A 363
V + + + + IG P SQ LQ LD +G + G +
Sbjct: 286 ------NHVHFNDGTEEDYDQVMLAIGRVPRSQALQ----LDKAGVRTGKNGAVQVDAYS 335
Query: 364 KTSVEGVFAAGDVQD 378
KTSV+ ++A GDV +
Sbjct: 336 KTSVDNIYAIGDVTN 350
>pdb|1NHR|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 180 IDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDE---FWSRGISACAICD 232
I K + TVK SGE +V+ + ++ + GA L++P +D + RG
Sbjct: 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141
Query: 233 GASPLFKGQVLAVVGGGDTATEEAIYLTKFARHV---HLLVRREQLRASRAMQDRV---F 286
+ + + V+G G E A K + V +L R + + D +
Sbjct: 142 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 287 NNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
NIT+ T + V +G ++KV T +++ +A + +G PN+ L+G
Sbjct: 202 EANNITIA----TGETVERYEGDGR---VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKG 253
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+EL +G + +E +TS VFA GD
Sbjct: 254 TLELHPNGLIKTDE-YMRTSEPDVFAVGD 281
>pdb|1F8W|A Chain A, Crystal Structure Of Nadh Peroxidase Mutant: R303m
Length = 447
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 180 IDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDE---FWSRGISACAICD 232
I K + TVK SGE +V+ + ++ + GA L++P +D + RG
Sbjct: 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141
Query: 233 GASPLFKGQVLAVVGGGDTATEEAIYLTKFARHV---HLLVRREQLRASRAMQDRV---F 286
+ + + V+G G E A K + V +L R + + D +
Sbjct: 142 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 287 NNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
NIT+ T + V +G ++KV T +++ +A + +G PN+ L+G
Sbjct: 202 EANNITIA----TGETVERYEGDGR---VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKG 253
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+EL +G + +E +TS VFA GD
Sbjct: 254 TLELHPNGLIKTDE-YMRTSEPDVFAVGD 281
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 10/54 (18%)
Query: 429 QEGFDITCTKHKGQYALRKLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEF 482
++ FD TK K E+ +++ + +T+ CGPCR + P+ + +F
Sbjct: 22 KDEFDAQMTKAK----------EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKF 65
>pdb|1NHS|A Chain A, An L40c Mutation Converts The Cysteine-Sulfenic Acid Redox
Centre In Enterococcal Nadh Peroxidase To A Disulfide
Length = 447
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 180 IDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDE---FWSRGISACAICD 232
I K + TVK SGE +V+ + ++ + GA L++P +D + RG
Sbjct: 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141
Query: 233 GASPLFKGQVLAVVGGGDTATEEAIYLTKFARHV---HLLVRREQLRASRAMQDRV---F 286
+ + + V+G G E A K + V +L R + + D +
Sbjct: 142 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 287 NNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
NIT+ T + V +G ++KV T +++ +A + +G PN+ L+G
Sbjct: 202 EANNITIA----TGETVERYEGDGR---VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKG 253
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+EL +G + +E +TS VFA GD
Sbjct: 254 TLELHPNGLIKTDE-YMRTSEPDVFAVGD 281
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPC+ + PIL ++ E+ ++ GI P + F K +
Sbjct: 63 CGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQVNM 122
Query: 525 GVKMKKEYREFIE 537
G K++ + +I+
Sbjct: 123 GALSKEQLKGYID 135
>pdb|1JOA|A Chain A, Nadh Peroxidase With Cysteine-Sulfenic Acid
pdb|1NPX|A Chain A, Structure Of Nadh Peroxidase From Streptococcus Faecalis
10c1 Refined At 2.16 Angstroms Resolution
pdb|2NPX|A Chain A, Nadh Binding Site And Catalysis Of Nadh Peroxidase
Length = 447
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 180 IDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDE---FWSRGISACAICD 232
I K + TVK SGE +V+ + ++ + GA L++P +D + RG
Sbjct: 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141
Query: 233 GASPLFKGQVLAVVGGGDTATEEAIYLTKFARHV---HLLVRREQLRASRAMQDRV---F 286
+ + + V+G G E A K + V +L R + + D +
Sbjct: 142 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 287 NNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
NIT+ T + V +G ++KV T +++ +A + +G PN+ L+G
Sbjct: 202 EANNITIA----TGETVERYEGDGR---VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKG 253
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+EL +G + +E +TS VFA GD
Sbjct: 254 TLELHPNGLIKTDE-YMRTSEPDVFAVGD 281
>pdb|1NHP|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 180 IDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDE---FWSRGISACAICD 232
I K + TVK SGE +V+ + ++ + GA L++P +D + RG
Sbjct: 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141
Query: 233 GASPLFKGQVLAVVGGGDTATEEAIYLTKFARHV---HLLVRREQLRASRAMQDRV---F 286
+ + + V+G G E A K + V +L R + + D +
Sbjct: 142 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 287 NNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
NIT+ T + V +G ++KV T +++ +A + +G PN+ L+G
Sbjct: 202 EANNITIA----TGETVERYEGDGR---VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKG 253
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+EL +G + +E +TS VFA GD
Sbjct: 254 TLELHPNGLIKTDE-YMRTSEPDVFAVGD 281
>pdb|1NHQ|A Chain A, Crystallographic Analyses Of Nadh Peroxidase Cys42ala And
Cys42ser Mutants: Active Site Structure, Mechanistic
Implications, And An Unusual Environment Of Arg303
Length = 447
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 180 IDVKSNPFTVK---SGERKVKCHS-IVFATGATAKRLNLPREDE---FWSRGISACAICD 232
I K + TVK SGE +V+ + ++ + GA L++P +D + RG
Sbjct: 82 IQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLK 141
Query: 233 GASPLFKGQVLAVVGGGDTATEEAIYLTKFARHV---HLLVRREQLRASRAMQDRV---F 286
+ + + V+G G E A K + V +L R + + D +
Sbjct: 142 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEM 201
Query: 287 NNPNITVHFNTETVDVVSNTKGQMSGILLRKVDTGEESVLEAKGLFYGIGHSPNSQLLQG 346
NIT+ T + V +G ++KV T +++ +A + +G PN+ L+G
Sbjct: 202 EANNITIA----TGETVERYEGDGR---VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKG 253
Query: 347 QVELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+EL +G + +E +TS VFA GD
Sbjct: 254 TLELHPNGLIKTDE-YMRTSEPDVFAVGD 281
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 25/66 (37%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPC+ + P K+ +E+ + + GI P + K ++ V
Sbjct: 37 CGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVT 96
Query: 525 GVKMKK 530
G K K
Sbjct: 97 GAKYDK 102
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 25/66 (37%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CGPC+ + P K+ +E+ + + GI P + K ++ V
Sbjct: 49 CGPCKAMAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVT 108
Query: 525 GVKMKK 530
G K K
Sbjct: 109 GAKYDK 114
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 446 RKLYHESPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGI 505
R + E+P + V + + CGPC+ L P L K++ + V +
Sbjct: 26 RVVNSETP--VVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEV 83
Query: 506 MGTPCVQFFKNKEMIRTVPGVKMKKEYREFIE 537
P V KN +++ G+K + + F++
Sbjct: 84 SAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLK 115
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%)
Query: 452 SPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCV 511
S + + V + + CGPC+ + P+L ++ E ++ ++ P +
Sbjct: 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTL 88
Query: 512 QFFKNKEMIRTVPGVKMK 529
FK+ + ++ + G K K
Sbjct: 89 ILFKDGQPVKRIVGAKGK 106
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 455 LICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFF 514
L V + +P CGPCR + PIL ++ + + V G+ P + F
Sbjct: 52 LTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111
Query: 515 KNKEMIRTVPGVK----MKKEYREFIEAN 539
+ + T G +++ R ++E
Sbjct: 112 RRGAPVATWVGASPRRVLEERLRPYLEGR 140
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 30.0 bits (66), Expect = 3.7, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 34/78 (43%)
Query: 452 SPRLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCV 511
S + + V + + CGPC+ + P+L ++ E ++ ++ P +
Sbjct: 24 SNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTL 83
Query: 512 QFFKNKEMIRTVPGVKMK 529
FK+ + ++ + G K K
Sbjct: 84 ILFKDGQPVKRIVGAKGK 101
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 449 YHESPRLICVLYTSPTCGPCRTLKPILGKVIDEF-DENVHFVXXXXXXXXXXXXXXGIMG 507
Y +S L+ + +P CG C+ + P K + ++N+ I G
Sbjct: 27 YIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPG 86
Query: 508 TPCVQFFKNKEMIRTV 523
P ++ FKN ++ ++
Sbjct: 87 FPSLKIFKNSDVNNSI 102
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 331 LFYGIGHSPNSQLLQGQ---VELDSSGYVIVEEGTAKTSVEGVFAAGD 375
+ Y +G SP+++ L+ + VE +++ Y++V+E +TSV ++A GD
Sbjct: 267 VIYCVGRSPDTENLKLEKLNVETNNN-YIVVDEN-QRTSVNNIYAVGD 312
>pdb|2VDC|G Chain G, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|H Chain H, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|I Chain I, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|J Chain J, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|K Chain K, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications.
pdb|2VDC|L Chain L, The 9.5 A Resolution Structure Of Glutamate Synthase From
Cryo-Electron Microscopy And Its Oligomerization
Behavior In Solution: Functional Implications
Length = 456
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 240 GQVLAVVGGGDTATEEA-IYLTKFARHVHLLVRREQLRASRAMQDRVFNNPNITVHFNTE 298
G+ + V+GGGDTA + + + A V L RR++ + Q V + V F +
Sbjct: 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR-KNMPGSQREVAHAEEEGVEFIWQ 322
Query: 299 TV-------DVVSNTKG--------QMSGILLRKVDTGEESVLEAKGLFYGIGHSPN--- 340
VV+ + +G +V G E ++A + +G P
Sbjct: 323 AAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLP 382
Query: 341 SQLLQGQVELDSSGYVIVEEGTAKTSVEGVFAAGDV 376
+ + ++++ G ++V+ T T+++GVFAAGD+
Sbjct: 383 NAFDEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDI 418
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V + + CGPC+ + P++ K +++ + F + P +
Sbjct: 19 KLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLL 77
Query: 514 FKNKEMIRTVPG 525
FKN + + V G
Sbjct: 78 FKNGKEVAKVVG 89
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 29.3 bits (64), Expect = 5.5, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 454 RLICVLYTSPTCGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQF 513
+L+ V + + CGPC+ + P++ K +++ + F + P +
Sbjct: 25 KLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLL 83
Query: 514 FKNKEMIRTVPG 525
FKN + + V G
Sbjct: 84 FKNGKEVAKVVG 95
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 29.3 bits (64), Expect = 5.6, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 454 RLICVLYTSPTCGPCRTLKP----ILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTP 509
+ + V + +P CG C+ L P GK+ E E + G+ G P
Sbjct: 25 KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSE-IRLAKVDATEESDLAQQYGVRGYP 83
Query: 510 CVQFFKN 516
++FF+N
Sbjct: 84 TIKFFRN 90
>pdb|3UCL|A Chain A, Cyclohexanone-Bound Crystal Structure Of Cyclohexanone
Monooxygenase In The Rotated Conformation
Length = 573
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 213 NLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRR 272
NLP D F I A +G S G+ + V+G G T + L H+ + VR
Sbjct: 186 NLPGLDTFEGETIHTAAWPEGKS--LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRT 243
Query: 273 --------------EQLRASRAMQDRVF---NNPNITVHFNTETVDVVSNTKGQMSGILL 315
EQ+ +A DR++ N + F T+ +S ++ + + I
Sbjct: 244 PQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQ 303
Query: 316 RKVDTG 321
D G
Sbjct: 304 EAWDHG 309
>pdb|3GWD|A Chain A, Closed Crystal Structure Of Cyclohexanone Monooxygenase
pdb|3GWF|A Chain A, Open Crystal Structure Of Cyclohexanone Monooxygenase
Length = 540
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 213 NLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEAIYLTKFARHVHLLVRR 272
NLP D F I A +G S G+ + V+G G T + L H+ + VR
Sbjct: 153 NLPGLDTFEGETIHTAAWPEGKS--LAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRT 210
Query: 273 --------------EQLRASRAMQDRVF---NNPNITVHFNTETVDVVSNTKGQMSGILL 315
EQ+ +A DR++ N + F T+ +S ++ + + I
Sbjct: 211 PQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQ 270
Query: 316 RKVDTG 321
D G
Sbjct: 271 EAWDHG 276
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 28.9 bits (63), Expect = 6.7, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 31/73 (42%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CG C+ + P+L ++ +++ + +M P + FK+ + + V
Sbjct: 31 CGSCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVV 90
Query: 525 GVKMKKEYREFIE 537
G + K+ E ++
Sbjct: 91 GFQPKENLAEVLD 103
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 28.9 bits (63), Expect = 7.3, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 31/73 (42%)
Query: 465 CGPCRTLKPILGKVIDEFDENVHFVXXXXXXXXXXXXXXGIMGTPCVQFFKNKEMIRTVP 524
CG C+ + P+L ++ +++ + +M P + FK+ + + V
Sbjct: 32 CGTCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVV 91
Query: 525 GVKMKKEYREFIE 537
G + K+ E ++
Sbjct: 92 GFQPKENLAEVLD 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,522,121
Number of Sequences: 62578
Number of extensions: 567452
Number of successful extensions: 1872
Number of sequences better than 100.0: 181
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 1653
Number of HSP's gapped (non-prelim): 201
length of query: 540
length of database: 14,973,337
effective HSP length: 104
effective length of query: 436
effective length of database: 8,465,225
effective search space: 3690838100
effective search space used: 3690838100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)