Query 009226
Match_columns 539
No_of_seqs 379 out of 1918
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 21:41:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vg0_A RAB proteins geranylger 100.0 1.5E-57 5E-62 498.1 43.5 418 20-482 6-556 (650)
2 3p1w_A Rabgdi protein; GDI RAB 100.0 4.9E-54 1.7E-58 458.3 37.7 378 19-444 17-404 (475)
3 2bcg_G Secretory pathway GDP d 100.0 5.3E-40 1.8E-44 351.6 38.0 376 20-443 9-387 (453)
4 1d5t_A Guanine nucleotide diss 100.0 3.1E-38 1.1E-42 335.9 35.6 370 20-443 4-376 (433)
5 4dgk_A Phytoene dehydrogenase; 100.0 8.2E-30 2.8E-34 275.3 29.6 344 23-426 2-377 (501)
6 3nrn_A Uncharacterized protein 99.9 6.7E-23 2.3E-27 216.4 25.9 332 23-445 1-340 (421)
7 3ka7_A Oxidoreductase; structu 99.9 2.2E-22 7.7E-27 212.2 28.9 335 23-444 1-355 (425)
8 2ivd_A PPO, PPOX, protoporphyr 99.9 2.9E-22 9.9E-27 214.9 26.0 349 22-444 16-399 (478)
9 1s3e_A Amine oxidase [flavin-c 99.9 1.1E-21 3.8E-26 212.9 24.2 295 21-377 3-306 (520)
10 2yg5_A Putrescine oxidase; oxi 99.9 6E-21 2E-25 203.2 25.0 292 20-376 3-305 (453)
11 3i6d_A Protoporphyrinogen oxid 99.9 3.7E-21 1.3E-25 205.2 22.9 348 22-445 5-394 (470)
12 3lov_A Protoporphyrinogen oxid 99.9 2.2E-20 7.4E-25 200.2 26.0 328 20-422 2-363 (475)
13 3nks_A Protoporphyrinogen oxid 99.9 8.1E-21 2.8E-25 203.4 22.1 326 23-423 3-369 (477)
14 1sez_A Protoporphyrinogen oxid 99.9 1.9E-20 6.4E-25 202.2 24.2 360 21-445 12-420 (504)
15 4gde_A UDP-galactopyranose mut 99.9 1.1E-21 3.9E-26 211.8 14.1 244 22-333 10-271 (513)
16 2vvm_A Monoamine oxidase N; FA 99.9 7.4E-21 2.5E-25 205.0 19.0 295 23-376 40-349 (495)
17 4dsg_A UDP-galactopyranose mut 99.8 2.3E-19 8E-24 193.1 17.2 343 21-445 8-377 (484)
18 1rsg_A FMS1 protein; FAD bindi 99.8 6E-18 2.1E-22 183.5 16.6 278 20-378 6-307 (516)
19 1b37_A Protein (polyamine oxid 99.7 1.2E-16 4E-21 171.3 23.7 286 21-379 3-312 (472)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.7 1.6E-16 5.6E-21 167.7 19.9 287 23-376 2-296 (431)
21 2iid_A L-amino-acid oxidase; f 99.7 3.8E-16 1.3E-20 168.3 21.2 284 21-376 32-335 (498)
22 2b9w_A Putative aminooxidase; 99.7 2.2E-16 7.6E-21 166.4 17.5 247 21-333 5-253 (424)
23 2jae_A L-amino acid oxidase; o 99.7 2.8E-16 9.7E-21 168.8 16.5 302 20-376 9-331 (489)
24 1v0j_A UDP-galactopyranose mut 99.6 7.4E-16 2.5E-20 161.7 6.4 231 21-333 6-244 (399)
25 3hdq_A UDP-galactopyranose mut 99.6 5.3E-14 1.8E-18 146.9 18.6 309 19-441 26-352 (397)
26 2e1m_A L-glutamate oxidase; L- 99.6 1.1E-13 3.7E-18 143.4 19.4 47 20-66 42-89 (376)
27 1i8t_A UDP-galactopyranose mut 99.5 5.1E-15 1.7E-19 153.5 8.3 226 22-333 1-230 (367)
28 2bi7_A UDP-galactopyranose mut 99.5 1.7E-14 5.7E-19 150.6 9.2 214 21-305 2-223 (384)
29 4gut_A Lysine-specific histone 99.5 2.3E-13 7.8E-18 153.6 16.9 99 271-377 526-625 (776)
30 2z3y_A Lysine-specific histone 99.4 2.8E-12 9.7E-17 142.9 18.9 101 270-378 392-501 (662)
31 2xag_A Lysine-specific histone 99.4 3.1E-12 1.1E-16 145.4 18.6 102 269-378 562-672 (852)
32 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 1.7E-11 6E-16 125.2 18.3 99 272-376 105-204 (342)
33 3ayj_A Pro-enzyme of L-phenyla 99.3 3.2E-12 1.1E-16 141.8 11.5 105 271-377 339-493 (721)
34 3dme_A Conserved exported prot 99.1 2.4E-10 8.3E-15 116.9 11.8 61 271-333 139-204 (369)
35 3dje_A Fructosyl amine: oxygen 99.1 9.1E-10 3.1E-14 116.2 16.4 61 271-333 149-216 (438)
36 3kkj_A Amine oxidase, flavin-c 99.0 2.1E-10 7.2E-15 110.2 5.3 45 23-67 3-47 (336)
37 3ps9_A TRNA 5-methylaminomethy 99.0 3E-09 1E-13 118.8 15.2 60 271-333 406-468 (676)
38 3nyc_A D-arginine dehydrogenas 99.0 2.5E-09 8.5E-14 110.1 12.6 59 271-333 143-204 (381)
39 4at0_A 3-ketosteroid-delta4-5a 98.9 1.4E-08 4.9E-13 109.5 17.8 42 21-62 40-81 (510)
40 2i0z_A NAD(FAD)-utilizing dehy 98.9 1.1E-08 3.9E-13 108.4 14.8 60 271-332 125-185 (447)
41 3pvc_A TRNA 5-methylaminomethy 98.9 9.6E-09 3.3E-13 115.0 14.9 60 271-333 401-464 (689)
42 2gag_B Heterotetrameric sarcos 98.9 4.1E-08 1.4E-12 101.9 17.9 60 271-333 163-225 (405)
43 3v76_A Flavoprotein; structura 98.9 6.4E-09 2.2E-13 109.4 11.7 58 271-332 124-181 (417)
44 1y0p_A Fumarate reductase flav 98.9 8.7E-08 3E-12 104.8 20.3 60 272-332 245-311 (571)
45 1qo8_A Flavocytochrome C3 fuma 98.9 5.5E-08 1.9E-12 106.3 18.4 59 272-332 240-306 (566)
46 1y56_B Sarcosine oxidase; dehy 98.8 4.3E-08 1.5E-12 101.1 16.4 60 271-333 138-200 (382)
47 3nlc_A Uncharacterized protein 98.8 2.1E-08 7.1E-13 108.8 11.8 53 279-333 220-272 (549)
48 1pj5_A N,N-dimethylglycine oxi 98.7 9.8E-08 3.4E-12 109.0 15.8 60 271-333 140-202 (830)
49 1d4d_A Flavocytochrome C fumar 98.7 4E-07 1.4E-11 99.6 19.7 58 273-332 246-311 (572)
50 3oz2_A Digeranylgeranylglycero 98.7 8.1E-09 2.8E-13 106.4 4.9 41 20-60 2-42 (397)
51 3fpz_A Thiazole biosynthetic e 98.5 6.7E-08 2.3E-12 97.9 4.9 42 22-63 65-108 (326)
52 1yvv_A Amine oxidase, flavin-c 98.5 9.6E-08 3.3E-12 96.5 5.3 45 22-66 2-46 (336)
53 4fk1_A Putative thioredoxin re 98.5 9.3E-08 3.2E-12 95.7 4.8 41 19-60 3-43 (304)
54 3itj_A Thioredoxin reductase 1 98.4 1.3E-07 4.3E-12 95.4 4.7 57 8-64 8-68 (338)
55 4gcm_A TRXR, thioredoxin reduc 98.4 2.2E-07 7.5E-12 93.1 5.2 40 22-62 6-45 (312)
56 3cgv_A Geranylgeranyl reductas 98.4 2.2E-07 7.5E-12 96.0 4.9 42 20-61 2-43 (397)
57 1ryi_A Glycine oxidase; flavop 98.3 2.8E-07 9.7E-12 94.8 5.5 59 271-333 153-214 (382)
58 3lxd_A FAD-dependent pyridine 98.3 3.6E-06 1.2E-10 88.0 13.2 57 278-336 193-249 (415)
59 4a9w_A Monooxygenase; baeyer-v 98.3 3.3E-07 1.1E-11 92.9 4.8 44 20-63 1-44 (357)
60 3fg2_P Putative rubredoxin red 98.3 8.9E-06 3E-10 84.7 15.7 57 278-336 183-239 (404)
61 2gqf_A Hypothetical protein HI 98.3 3.1E-07 1.1E-11 96.0 3.6 43 20-62 2-44 (401)
62 3rp8_A Flavoprotein monooxygen 98.3 4.9E-07 1.7E-11 94.2 5.1 46 14-59 15-60 (407)
63 3o0h_A Glutathione reductase; 98.3 3.6E-07 1.2E-11 97.8 4.1 53 279-334 232-284 (484)
64 2oln_A NIKD protein; flavoprot 98.3 5.7E-07 1.9E-11 93.3 5.4 59 271-333 142-203 (397)
65 3urh_A Dihydrolipoyl dehydroge 98.3 4E-07 1.4E-11 97.6 4.1 49 14-63 18-66 (491)
66 4a5l_A Thioredoxin reductase; 98.2 5.3E-07 1.8E-11 90.1 4.6 36 21-56 3-38 (314)
67 3ab1_A Ferredoxin--NADP reduct 98.2 5.4E-07 1.8E-11 92.2 4.2 45 19-63 11-55 (360)
68 1rp0_A ARA6, thiazole biosynth 98.2 6.9E-07 2.4E-11 88.7 4.7 40 21-60 38-78 (284)
69 3l8k_A Dihydrolipoyl dehydroge 98.2 4.9E-07 1.7E-11 96.3 3.7 43 21-63 3-45 (466)
70 2zbw_A Thioredoxin reductase; 98.2 5.9E-07 2E-11 90.7 4.1 44 20-63 3-46 (335)
71 3c96_A Flavin-containing monoo 98.2 8.8E-07 3E-11 92.5 5.4 44 20-63 2-46 (410)
72 3da1_A Glycerol-3-phosphate de 98.2 7.5E-07 2.6E-11 97.2 5.1 61 271-333 160-227 (561)
73 3k30_A Histamine dehydrogenase 98.2 1.2E-06 4.2E-11 97.8 6.6 60 3-63 373-432 (690)
74 2uzz_A N-methyl-L-tryptophan o 98.2 9.2E-07 3.1E-11 90.6 5.1 59 271-333 138-199 (372)
75 2gjc_A Thiazole biosynthetic e 98.2 1.7E-06 5.9E-11 87.4 6.8 40 22-61 65-106 (326)
76 4ap3_A Steroid monooxygenase; 98.2 7.8E-07 2.7E-11 96.8 4.5 48 19-66 18-65 (549)
77 3cty_A Thioredoxin reductase; 98.2 1.1E-06 3.7E-11 88.2 4.9 42 21-63 15-56 (319)
78 2gv8_A Monooxygenase; FMO, FAD 98.2 1.4E-06 4.9E-11 92.0 6.1 43 21-63 5-49 (447)
79 1c0p_A D-amino acid oxidase; a 98.2 1.5E-06 5.3E-11 88.9 6.1 39 21-59 5-43 (363)
80 3lzw_A Ferredoxin--NADP reduct 98.2 8.7E-07 3E-11 88.9 3.9 42 22-63 7-48 (332)
81 2xdo_A TETX2 protein; tetracyc 98.1 1.6E-06 5.5E-11 90.1 5.9 41 20-60 24-64 (398)
82 3f8d_A Thioredoxin reductase ( 98.1 1.4E-06 4.6E-11 87.1 5.0 40 22-63 15-54 (323)
83 3alj_A 2-methyl-3-hydroxypyrid 98.1 1.6E-06 5.6E-11 89.4 5.6 41 20-60 9-49 (379)
84 2qcu_A Aerobic glycerol-3-phos 98.1 1.6E-06 5.4E-11 93.2 5.7 52 279-333 149-205 (501)
85 2gf3_A MSOX, monomeric sarcosi 98.1 1.7E-06 5.8E-11 89.1 5.6 51 279-333 150-200 (389)
86 3nix_A Flavoprotein/dehydrogen 98.1 1.5E-06 5.3E-11 90.6 5.4 53 279-332 106-160 (421)
87 3jsk_A Cypbp37 protein; octame 98.1 1.5E-06 5.2E-11 88.3 5.1 40 22-61 79-120 (344)
88 1w4x_A Phenylacetone monooxyge 98.1 1.6E-06 5.4E-11 94.2 5.5 45 19-63 13-57 (542)
89 2cul_A Glucose-inhibited divis 98.1 1.7E-06 5.7E-11 83.2 5.0 36 20-55 1-36 (232)
90 3lad_A Dihydrolipoamide dehydr 98.1 1.6E-06 5.4E-11 92.5 5.2 41 21-61 2-42 (476)
91 2vdc_G Glutamate synthase [NAD 98.1 2.2E-06 7.6E-11 91.0 6.1 45 18-62 118-162 (456)
92 3i3l_A Alkylhalidase CMLS; fla 98.1 2.3E-06 7.9E-11 93.8 6.3 52 279-332 128-182 (591)
93 4dna_A Probable glutathione re 98.1 1.3E-06 4.4E-11 92.9 4.0 53 279-334 211-264 (463)
94 3c4n_A Uncharacterized protein 98.1 1.7E-06 5.9E-11 90.2 4.9 59 271-333 161-231 (405)
95 1mo9_A ORF3; nucleotide bindin 98.1 2.2E-06 7.4E-11 92.7 5.8 45 19-63 40-84 (523)
96 2q7v_A Thioredoxin reductase; 98.1 1.8E-06 6.1E-11 86.9 4.8 42 21-63 7-48 (325)
97 3axb_A Putative oxidoreductase 98.1 1.6E-06 5.3E-11 91.6 4.5 60 271-333 170-249 (448)
98 3d1c_A Flavin-containing putat 98.1 1.3E-06 4.6E-11 89.2 3.9 43 20-63 2-45 (369)
99 3r9u_A Thioredoxin reductase; 98.1 1.7E-06 5.9E-11 86.1 4.4 42 21-63 3-45 (315)
100 2vou_A 2,6-dihydroxypyridine h 98.1 2.9E-06 1E-10 88.1 6.1 38 20-57 3-40 (397)
101 2a87_A TRXR, TR, thioredoxin r 98.1 2.2E-06 7.5E-11 86.7 4.7 45 18-63 10-54 (335)
102 1dxl_A Dihydrolipoamide dehydr 98.1 2.4E-06 8.3E-11 90.8 5.2 43 21-63 5-47 (470)
103 1v59_A Dihydrolipoamide dehydr 98.0 1.3E-06 4.5E-11 93.1 2.8 43 21-63 4-46 (478)
104 3qfa_A Thioredoxin reductase 1 98.0 2.7E-06 9.1E-11 91.9 5.2 43 21-63 31-81 (519)
105 3uox_A Otemo; baeyer-villiger 98.0 2.7E-06 9.1E-11 92.4 5.1 48 20-67 7-54 (545)
106 3dk9_A Grase, GR, glutathione 98.0 1.7E-06 5.9E-11 92.2 3.4 43 20-63 18-60 (478)
107 2wdq_A Succinate dehydrogenase 98.0 2.2E-06 7.5E-11 94.0 4.3 53 279-332 143-200 (588)
108 1zmd_A Dihydrolipoyl dehydroge 98.0 2E-06 6.8E-11 91.7 3.8 44 20-63 4-47 (474)
109 2qae_A Lipoamide, dihydrolipoy 98.0 2.2E-06 7.4E-11 91.2 4.1 42 22-63 2-43 (468)
110 3dgz_A Thioredoxin reductase 2 98.0 2.7E-06 9.4E-11 91.0 4.9 43 21-63 5-55 (488)
111 3gwf_A Cyclohexanone monooxyge 98.0 2.2E-06 7.7E-11 92.9 4.2 47 20-66 6-53 (540)
112 3fmw_A Oxygenase; mithramycin, 98.0 3.7E-06 1.3E-10 91.8 5.9 38 21-58 48-85 (570)
113 3pl8_A Pyranose 2-oxidase; sub 98.0 3.4E-06 1.2E-10 93.0 5.7 42 21-62 45-86 (623)
114 2yqu_A 2-oxoglutarate dehydrog 98.0 2.4E-06 8.2E-11 90.5 4.0 42 22-63 1-42 (455)
115 1ojt_A Surface protein; redox- 98.0 1.9E-06 6.5E-11 92.1 3.2 43 21-63 5-47 (482)
116 2qa1_A PGAE, polyketide oxygen 98.0 4.7E-06 1.6E-10 89.5 6.2 41 19-59 8-48 (500)
117 2x3n_A Probable FAD-dependent 98.0 4E-06 1.4E-10 86.9 5.5 52 279-332 107-160 (399)
118 2gmh_A Electron transfer flavo 98.0 3.3E-06 1.1E-10 92.5 5.0 40 22-61 35-80 (584)
119 2bry_A NEDD9 interacting prote 98.0 4.9E-06 1.7E-10 89.3 6.0 41 20-60 90-130 (497)
120 3e1t_A Halogenase; flavoprotei 98.0 3.9E-06 1.3E-10 90.3 5.2 52 279-332 111-166 (512)
121 2rgh_A Alpha-glycerophosphate 98.0 4.8E-06 1.6E-10 91.0 5.8 61 271-333 178-245 (571)
122 3atr_A Conserved archaeal prot 98.0 2.2E-06 7.7E-11 90.7 3.1 51 280-332 101-156 (453)
123 2a8x_A Dihydrolipoyl dehydroge 98.0 2.6E-06 8.8E-11 90.5 3.6 42 21-63 2-43 (464)
124 1chu_A Protein (L-aspartate ox 98.0 4E-06 1.4E-10 91.0 5.0 41 20-61 6-46 (540)
125 2r0c_A REBC; flavin adenine di 98.0 4.4E-06 1.5E-10 90.8 5.3 41 21-61 25-65 (549)
126 1vdc_A NTR, NADPH dependent th 98.0 2.9E-06 1E-10 85.4 3.6 44 20-63 6-53 (333)
127 1zk7_A HGII, reductase, mercur 98.0 3.7E-06 1.3E-10 89.4 4.5 43 20-63 2-44 (467)
128 1trb_A Thioredoxin reductase; 98.0 3E-06 1E-10 84.8 3.6 42 20-62 3-44 (320)
129 2q0l_A TRXR, thioredoxin reduc 98.0 5.2E-06 1.8E-10 82.7 5.3 40 23-63 2-42 (311)
130 3ihg_A RDME; flavoenzyme, anth 98.0 6E-06 2E-10 89.4 6.2 39 21-59 4-42 (535)
131 3dgh_A TRXR-1, thioredoxin red 98.0 4.7E-06 1.6E-10 89.0 5.1 55 279-335 227-286 (483)
132 2bs2_A Quinol-fumarate reducta 98.0 3.6E-06 1.2E-10 93.3 4.3 52 279-332 158-214 (660)
133 2r9z_A Glutathione amide reduc 98.0 3.7E-06 1.3E-10 89.4 4.1 52 280-334 208-260 (463)
134 3ic9_A Dihydrolipoamide dehydr 98.0 3.9E-06 1.3E-10 90.0 4.3 40 22-62 8-47 (492)
135 1o94_A Tmadh, trimethylamine d 98.0 5.6E-06 1.9E-10 93.1 5.7 44 20-63 387-430 (729)
136 2hqm_A GR, grase, glutathione 97.9 3.4E-06 1.2E-10 90.1 3.7 55 279-334 226-281 (479)
137 3cp8_A TRNA uridine 5-carboxym 97.9 4.8E-06 1.7E-10 91.3 4.9 45 15-59 14-59 (641)
138 3g3e_A D-amino-acid oxidase; F 97.9 3.5E-06 1.2E-10 85.8 3.6 37 23-59 1-43 (351)
139 1k0i_A P-hydroxybenzoate hydro 97.9 4.8E-06 1.6E-10 86.1 4.5 35 22-56 2-36 (394)
140 3gyx_A Adenylylsulfate reducta 97.9 6.1E-06 2.1E-10 91.5 5.6 52 279-332 166-227 (662)
141 1ges_A Glutathione reductase; 97.9 3.8E-06 1.3E-10 89.0 3.6 53 280-334 209-261 (450)
142 2qa2_A CABE, polyketide oxygen 97.9 7.2E-06 2.4E-10 88.1 5.8 39 21-59 11-49 (499)
143 2h88_A Succinate dehydrogenase 97.9 4.9E-06 1.7E-10 91.6 4.4 52 279-332 155-211 (621)
144 4hb9_A Similarities with proba 97.9 6.9E-06 2.4E-10 84.8 5.3 35 23-57 2-36 (412)
145 2eq6_A Pyruvate dehydrogenase 97.9 4.3E-06 1.5E-10 88.9 3.6 42 20-62 4-45 (464)
146 2xve_A Flavin-containing monoo 97.9 7.2E-06 2.5E-10 87.2 5.2 42 23-64 3-50 (464)
147 3fbs_A Oxidoreductase; structu 97.9 6.5E-06 2.2E-10 81.1 4.5 38 23-60 3-40 (297)
148 1fec_A Trypanothione reductase 97.9 5.6E-06 1.9E-10 88.7 4.2 54 279-334 231-284 (490)
149 1ps9_A 2,4-dienoyl-COA reducta 97.9 1.2E-05 4.1E-10 89.5 6.7 42 21-62 372-413 (671)
150 3c4a_A Probable tryptophan hyd 97.9 8E-06 2.7E-10 84.3 4.8 36 23-58 1-38 (381)
151 1ebd_A E3BD, dihydrolipoamide 97.9 5.9E-06 2E-10 87.5 3.8 40 22-62 3-42 (455)
152 4b1b_A TRXR, thioredoxin reduc 97.9 6.5E-06 2.2E-10 89.2 4.1 52 279-333 263-314 (542)
153 3ces_A MNMG, tRNA uridine 5-ca 97.9 8.6E-06 2.9E-10 89.4 5.1 50 280-332 125-175 (651)
154 1lvl_A Dihydrolipoamide dehydr 97.8 5.6E-06 1.9E-10 87.8 3.2 42 21-63 4-45 (458)
155 2zxi_A TRNA uridine 5-carboxym 97.8 9.8E-06 3.4E-10 88.6 5.1 52 279-333 123-175 (637)
156 2wpf_A Trypanothione reductase 97.8 6.1E-06 2.1E-10 88.5 3.3 55 279-335 235-289 (495)
157 1fl2_A Alkyl hydroperoxide red 97.8 1.1E-05 3.7E-10 80.4 4.8 39 22-62 1-39 (310)
158 1y56_A Hypothetical protein PH 97.8 8.2E-06 2.8E-10 87.5 4.2 42 21-63 107-148 (493)
159 3g5s_A Methylenetetrahydrofola 97.8 1.5E-05 5.1E-10 81.9 5.8 41 23-63 2-42 (443)
160 3ihm_A Styrene monooxygenase A 97.8 8.9E-06 3E-10 85.6 4.3 34 22-55 22-55 (430)
161 1xdi_A RV3303C-LPDA; reductase 97.8 6.1E-06 2.1E-10 88.6 2.9 51 280-333 224-274 (499)
162 2dkh_A 3-hydroxybenzoate hydro 97.8 2.2E-05 7.5E-10 86.9 7.4 39 21-59 31-70 (639)
163 1onf_A GR, grase, glutathione 97.8 9.1E-06 3.1E-10 87.2 4.1 55 279-335 217-272 (500)
164 2aqj_A Tryptophan halogenase, 97.8 1.6E-05 5.4E-10 86.1 6.0 52 279-332 165-216 (538)
165 1kdg_A CDH, cellobiose dehydro 97.8 1.3E-05 4.3E-10 87.1 5.2 38 20-57 5-42 (546)
166 2e5v_A L-aspartate oxidase; ar 97.8 1.5E-05 5.2E-10 84.9 5.5 51 279-332 119-170 (472)
167 2ywl_A Thioredoxin reductase r 97.8 1.8E-05 6E-10 72.4 4.8 33 23-55 2-34 (180)
168 3t37_A Probable dehydrogenase; 97.8 1.4E-05 4.7E-10 86.2 4.5 35 22-56 17-52 (526)
169 1kf6_A Fumarate reductase flav 97.8 1.2E-05 4.2E-10 88.3 4.2 52 279-332 134-191 (602)
170 3s5w_A L-ornithine 5-monooxyge 97.8 1.4E-05 4.8E-10 84.6 4.4 41 21-61 29-74 (463)
171 3q9t_A Choline dehydrogenase a 97.7 1.7E-05 5.8E-10 86.5 5.0 37 20-56 4-41 (577)
172 1jnr_A Adenylylsulfate reducta 97.7 1.6E-05 5.3E-10 88.1 4.4 52 279-332 151-212 (643)
173 2gag_A Heterotetrameric sarcos 97.7 2E-05 6.7E-10 91.3 4.5 42 21-62 127-168 (965)
174 1hyu_A AHPF, alkyl hydroperoxi 97.7 2.9E-05 1E-09 83.8 5.3 40 21-62 211-250 (521)
175 2e4g_A Tryptophan halogenase; 97.7 3.3E-05 1.1E-09 83.8 5.7 52 279-332 194-246 (550)
176 1lqt_A FPRA; NADP+ derivative, 97.7 1.9E-05 6.4E-10 83.8 3.6 43 20-62 1-50 (456)
177 1ju2_A HydroxynitrIle lyase; f 97.7 1.9E-05 6.4E-10 85.6 3.6 38 21-59 25-62 (536)
178 3cgb_A Pyridine nucleotide-dis 97.6 2.6E-05 8.9E-10 83.2 4.5 53 279-335 227-279 (480)
179 2pyx_A Tryptophan halogenase; 97.6 2.7E-05 9.4E-10 84.0 4.7 52 279-332 175-227 (526)
180 3kd9_A Coenzyme A disulfide re 97.6 3.3E-05 1.1E-09 81.5 4.9 42 20-61 1-44 (449)
181 2weu_A Tryptophan 5-halogenase 97.6 2.2E-05 7.4E-10 84.3 3.4 52 279-332 173-224 (511)
182 3ics_A Coenzyme A-disulfide re 97.6 3.6E-05 1.2E-09 84.2 5.0 50 279-333 228-277 (588)
183 3iwa_A FAD-dependent pyridine 97.6 2.9E-05 1E-09 82.5 4.1 55 278-335 201-255 (472)
184 2x8g_A Thioredoxin glutathione 97.6 3.1E-05 1.1E-09 84.9 4.4 35 20-54 105-139 (598)
185 1gte_A Dihydropyrimidine dehyd 97.6 3.8E-05 1.3E-09 89.5 5.3 41 21-61 186-227 (1025)
186 3qvp_A Glucose oxidase; oxidor 97.6 4E-05 1.4E-09 83.7 4.9 38 18-55 15-53 (583)
187 1cjc_A Protein (adrenodoxin re 97.6 3.7E-05 1.3E-09 81.6 4.3 42 21-62 5-48 (460)
188 1pn0_A Phenol 2-monooxygenase; 97.6 4.7E-05 1.6E-09 84.6 5.3 45 21-65 7-58 (665)
189 1n4w_A CHOD, cholesterol oxida 97.5 5.8E-05 2E-09 81.0 5.1 39 20-58 3-41 (504)
190 3oc4_A Oxidoreductase, pyridin 97.5 6.1E-05 2.1E-09 79.6 4.6 53 279-335 189-241 (452)
191 3h28_A Sulfide-quinone reducta 97.5 6.3E-05 2.2E-09 78.9 4.2 39 23-61 3-43 (430)
192 2cdu_A NADPH oxidase; flavoenz 97.4 7.5E-05 2.6E-09 78.9 4.7 55 278-335 190-244 (452)
193 3fim_B ARYL-alcohol oxidase; A 97.4 6.2E-05 2.1E-09 81.9 4.0 38 22-59 2-40 (566)
194 1coy_A Cholesterol oxidase; ox 97.4 0.00011 3.7E-09 79.0 5.8 38 20-57 9-46 (507)
195 1q1r_A Putidaredoxin reductase 97.4 0.00011 3.8E-09 77.2 5.8 57 279-335 191-247 (431)
196 1gpe_A Protein (glucose oxidas 97.4 0.00011 3.8E-09 80.4 4.9 38 20-57 22-60 (587)
197 2bc0_A NADH oxidase; flavoprot 97.4 0.0001 3.5E-09 78.8 4.4 53 279-335 236-288 (490)
198 1m6i_A Programmed cell death p 97.4 0.00012 4E-09 78.5 4.8 53 280-335 227-279 (493)
199 1nhp_A NADH peroxidase; oxidor 97.4 0.00011 3.7E-09 77.5 4.5 53 279-335 191-243 (447)
200 2v3a_A Rubredoxin reductase; a 97.3 0.00013 4.4E-09 75.3 4.9 54 279-335 187-240 (384)
201 2jbv_A Choline oxidase; alcoho 97.3 0.00014 4.8E-09 78.9 5.4 39 21-59 12-51 (546)
202 3h8l_A NADH oxidase; membrane 97.3 7.7E-05 2.6E-09 77.6 3.1 51 279-336 218-268 (409)
203 2gqw_A Ferredoxin reductase; f 97.3 0.00015 5.1E-09 75.6 4.9 51 279-336 187-237 (408)
204 1xhc_A NADH oxidase /nitrite r 97.2 0.00021 7.1E-09 73.4 4.8 47 280-334 184-230 (367)
205 3sx6_A Sulfide-quinone reducta 97.2 0.00019 6.4E-09 75.5 4.2 36 22-57 4-42 (437)
206 3ef6_A Toluene 1,2-dioxygenase 97.1 0.00031 1.1E-08 73.2 5.1 54 279-335 185-238 (410)
207 4b63_A L-ornithine N5 monooxyg 97.1 0.00013 4.3E-09 78.4 2.1 44 20-63 37-80 (501)
208 3ntd_A FAD-dependent pyridine 97.1 0.00027 9.1E-09 76.7 4.7 36 23-58 2-39 (565)
209 4g6h_A Rotenone-insensitive NA 96.9 0.00059 2E-08 73.1 4.4 36 21-56 41-76 (502)
210 3klj_A NAD(FAD)-dependent dehy 96.8 0.00095 3.2E-08 69.0 5.2 39 21-59 8-46 (385)
211 3vrd_B FCCB subunit, flavocyto 96.8 0.00071 2.4E-08 69.9 4.2 38 23-60 3-42 (401)
212 4eqs_A Coenzyme A disulfide re 96.7 0.00097 3.3E-08 70.1 4.3 48 279-333 188-235 (437)
213 3hyw_A Sulfide-quinone reducta 96.4 0.0016 5.4E-08 68.2 4.0 34 24-57 4-39 (430)
214 2g1u_A Hypothetical protein TM 95.3 0.016 5.6E-07 51.2 5.0 34 22-55 19-52 (155)
215 1nhp_A NADH peroxidase; oxidor 95.3 0.018 6E-07 60.4 6.0 39 22-60 149-187 (447)
216 1lss_A TRK system potassium up 95.2 0.019 6.5E-07 49.2 4.8 33 23-55 5-37 (140)
217 3klj_A NAD(FAD)-dependent dehy 95.2 0.015 5.2E-07 59.8 4.9 38 23-60 147-184 (385)
218 3fwz_A Inner membrane protein 95.0 0.032 1.1E-06 48.5 5.7 33 23-55 8-40 (140)
219 1id1_A Putative potassium chan 94.9 0.03 1E-06 49.3 5.3 35 21-55 2-36 (153)
220 4gcm_A TRXR, thioredoxin reduc 94.8 0.023 7.8E-07 56.1 4.8 37 23-59 146-182 (312)
221 1lvl_A Dihydrolipoamide dehydr 94.4 0.028 9.5E-07 59.2 4.8 37 23-59 172-208 (458)
222 3llv_A Exopolyphosphatase-rela 94.4 0.037 1.3E-06 47.8 4.7 33 23-55 7-39 (141)
223 2v3a_A Rubredoxin reductase; a 94.4 0.036 1.2E-06 56.7 5.4 40 22-61 145-184 (384)
224 1yvv_A Amine oxidase, flavin-c 94.3 0.62 2.1E-05 45.9 14.2 92 273-377 104-197 (336)
225 2eq6_A Pyruvate dehydrogenase 94.3 0.037 1.3E-06 58.3 5.3 37 23-59 170-206 (464)
226 1xhc_A NADH oxidase /nitrite r 94.2 0.035 1.2E-06 56.6 4.8 37 23-59 144-180 (367)
227 1ebd_A E3BD, dihydrolipoamide 94.2 0.047 1.6E-06 57.3 5.8 38 22-59 170-207 (455)
228 1v59_A Dihydrolipoamide dehydr 94.2 0.04 1.4E-06 58.1 5.3 38 23-60 184-221 (478)
229 2yqu_A 2-oxoglutarate dehydrog 94.2 0.039 1.3E-06 57.9 5.1 37 23-59 168-204 (455)
230 3c85_A Putative glutathione-re 94.0 0.051 1.7E-06 49.3 4.9 36 20-55 37-73 (183)
231 4a5l_A Thioredoxin reductase; 93.8 0.048 1.6E-06 53.6 4.7 35 23-57 153-187 (314)
232 2gqw_A Ferredoxin reductase; f 93.8 0.057 1.9E-06 55.8 5.4 38 23-60 146-183 (408)
233 3ic5_A Putative saccharopine d 93.8 0.061 2.1E-06 44.4 4.6 33 23-55 6-39 (118)
234 1ges_A Glutathione reductase; 93.7 0.055 1.9E-06 56.7 5.1 37 23-59 168-204 (450)
235 4e12_A Diketoreductase; oxidor 93.4 0.076 2.6E-06 52.0 5.4 34 22-55 4-37 (283)
236 3ado_A Lambda-crystallin; L-gu 93.4 0.063 2.1E-06 53.7 4.7 33 23-55 7-39 (319)
237 3k6j_A Protein F01G10.3, confi 93.3 0.084 2.9E-06 55.4 5.8 52 5-56 32-88 (460)
238 1ryi_A Glycine oxidase; flavop 93.2 0.12 4E-06 52.3 6.6 50 10-59 5-54 (382)
239 2r9z_A Glutathione amide reduc 93.2 0.071 2.4E-06 56.1 5.1 37 23-59 167-203 (463)
240 3cgb_A Pyridine nucleotide-dis 93.2 0.049 1.7E-06 57.6 3.9 38 22-59 186-223 (480)
241 3doj_A AT3G25530, dehydrogenas 93.1 0.082 2.8E-06 52.5 5.2 48 9-56 7-55 (310)
242 3qsg_A NAD-binding phosphogluc 93.1 0.063 2.2E-06 53.5 4.2 49 7-55 7-58 (312)
243 1zmd_A Dihydrolipoyl dehydroge 93.0 0.085 2.9E-06 55.6 5.4 37 23-59 179-215 (474)
244 1q1r_A Putidaredoxin reductase 92.9 0.093 3.2E-06 54.6 5.4 38 23-60 150-187 (431)
245 2hmt_A YUAA protein; RCK, KTN, 92.9 0.079 2.7E-06 45.4 4.2 32 24-55 8-39 (144)
246 2bc0_A NADH oxidase; flavoprot 92.9 0.082 2.8E-06 56.0 5.0 37 23-59 195-231 (490)
247 4ap3_A Steroid monooxygenase; 92.8 0.11 3.7E-06 56.0 6.0 37 21-57 190-226 (549)
248 2a8x_A Dihydrolipoyl dehydroge 92.8 0.088 3E-06 55.3 5.1 37 23-59 172-208 (464)
249 3ic9_A Dihydrolipoamide dehydr 92.7 0.1 3.4E-06 55.4 5.4 39 22-60 174-212 (492)
250 3gwf_A Cyclohexanone monooxyge 92.7 0.1 3.6E-06 56.1 5.6 35 22-56 178-212 (540)
251 1ojt_A Surface protein; redox- 92.7 0.077 2.6E-06 56.1 4.5 37 23-59 186-222 (482)
252 3d1c_A Flavin-containing putat 92.7 0.085 2.9E-06 53.0 4.6 36 23-58 167-202 (369)
253 4e21_A 6-phosphogluconate dehy 92.7 0.096 3.3E-06 53.3 5.0 40 16-55 16-55 (358)
254 3ef6_A Toluene 1,2-dioxygenase 92.7 0.097 3.3E-06 54.1 5.1 37 23-59 144-180 (410)
255 3kd9_A Coenzyme A disulfide re 92.6 0.11 3.7E-06 54.3 5.4 38 23-60 149-186 (449)
256 2q0l_A TRXR, thioredoxin reduc 92.6 0.1 3.5E-06 51.1 4.9 36 23-58 144-179 (311)
257 3l4b_C TRKA K+ channel protien 92.5 0.087 3E-06 49.3 4.1 32 24-55 2-33 (218)
258 1f0y_A HCDH, L-3-hydroxyacyl-C 92.5 0.12 4.2E-06 50.9 5.4 32 24-55 17-48 (302)
259 1dxl_A Dihydrolipoamide dehydr 92.4 0.081 2.8E-06 55.6 4.2 37 23-59 178-214 (470)
260 3uox_A Otemo; baeyer-villiger 92.4 0.11 3.8E-06 55.9 5.3 37 21-57 184-220 (545)
261 3dtt_A NADP oxidoreductase; st 92.4 0.12 4E-06 49.5 4.9 38 18-55 15-52 (245)
262 2raf_A Putative dinucleotide-b 92.3 0.13 4.6E-06 47.8 5.1 35 22-56 19-53 (209)
263 1bg6_A N-(1-D-carboxylethyl)-L 92.2 0.12 4E-06 52.1 5.0 35 21-55 3-37 (359)
264 2hqm_A GR, grase, glutathione 92.2 0.11 3.9E-06 54.7 5.1 37 23-59 186-222 (479)
265 1fl2_A Alkyl hydroperoxide red 92.2 0.11 3.9E-06 50.8 4.7 35 23-57 145-179 (310)
266 3axb_A Putative oxidoreductase 92.1 0.22 7.5E-06 51.7 7.0 41 20-60 21-62 (448)
267 3da1_A Glycerol-3-phosphate de 92.1 0.2 6.7E-06 54.2 6.8 44 19-62 15-58 (561)
268 2y0c_A BCEC, UDP-glucose dehyd 92.1 0.12 4.1E-06 54.7 5.0 34 22-55 8-41 (478)
269 1onf_A GR, grase, glutathione 92.1 0.12 4.1E-06 54.9 5.0 37 23-59 177-213 (500)
270 3fg2_P Putative rubredoxin red 92.1 0.14 4.9E-06 52.6 5.4 39 23-61 143-181 (404)
271 1ks9_A KPA reductase;, 2-dehyd 91.9 0.14 4.8E-06 49.8 5.0 33 24-56 2-34 (291)
272 3i83_A 2-dehydropantoate 2-red 91.9 0.14 4.7E-06 51.1 5.0 33 23-55 3-35 (320)
273 4eqs_A Coenzyme A disulfide re 91.9 0.16 5.6E-06 52.9 5.7 38 23-60 148-185 (437)
274 1zcj_A Peroxisomal bifunctiona 91.9 0.18 6E-06 53.2 6.0 33 23-55 38-70 (463)
275 2xve_A Flavin-containing monoo 91.9 0.12 4.1E-06 54.4 4.7 36 23-58 198-233 (464)
276 3g0o_A 3-hydroxyisobutyrate de 91.9 0.14 4.8E-06 50.5 5.0 35 21-55 6-40 (303)
277 1zk7_A HGII, reductase, mercur 91.9 0.14 4.7E-06 53.8 5.1 37 23-59 177-213 (467)
278 1pzg_A LDH, lactate dehydrogen 91.9 0.15 5.2E-06 51.2 5.2 34 22-55 9-43 (331)
279 3vtf_A UDP-glucose 6-dehydroge 91.8 0.16 5.5E-06 53.0 5.5 34 22-55 21-54 (444)
280 1vdc_A NTR, NADPH dependent th 91.8 0.13 4.6E-06 50.8 4.7 36 23-58 160-195 (333)
281 3ghy_A Ketopantoate reductase 91.8 0.14 4.9E-06 51.3 4.9 34 22-55 3-36 (335)
282 2qae_A Lipoamide, dihydrolipoy 91.8 0.14 4.9E-06 53.7 5.1 37 23-59 175-211 (468)
283 2gv8_A Monooxygenase; FMO, FAD 91.7 0.13 4.4E-06 53.7 4.8 35 23-57 213-248 (447)
284 2q7v_A Thioredoxin reductase; 91.7 0.15 5E-06 50.4 4.9 36 23-58 153-188 (325)
285 2izz_A Pyrroline-5-carboxylate 91.7 0.13 4.6E-06 51.3 4.7 41 15-55 15-59 (322)
286 3lxd_A FAD-dependent pyridine 91.7 0.16 5.5E-06 52.4 5.4 40 22-61 152-191 (415)
287 1trb_A Thioredoxin reductase; 91.7 0.14 4.7E-06 50.3 4.7 36 23-58 146-181 (320)
288 2uzz_A N-methyl-L-tryptophan o 91.7 0.32 1.1E-05 48.8 7.5 42 22-63 2-43 (372)
289 2dpo_A L-gulonate 3-dehydrogen 91.7 0.14 4.9E-06 51.1 4.8 34 23-56 7-40 (319)
290 2cdu_A NADPH oxidase; flavoenz 91.6 0.14 4.9E-06 53.4 4.9 37 23-59 150-186 (452)
291 2a87_A TRXR, TR, thioredoxin r 91.6 0.14 4.9E-06 50.8 4.7 36 23-58 156-191 (335)
292 3hn2_A 2-dehydropantoate 2-red 91.6 0.14 4.9E-06 50.7 4.7 33 23-55 3-35 (312)
293 2oln_A NIKD protein; flavoprot 91.6 0.36 1.2E-05 49.0 7.9 38 21-58 3-40 (397)
294 3k96_A Glycerol-3-phosphate de 91.6 0.16 5.6E-06 51.5 5.1 35 21-55 28-62 (356)
295 2pv7_A T-protein [includes: ch 91.5 0.22 7.7E-06 49.0 5.9 34 23-56 22-56 (298)
296 2zbw_A Thioredoxin reductase; 91.5 0.15 5E-06 50.6 4.6 37 23-59 153-189 (335)
297 3l8k_A Dihydrolipoyl dehydroge 91.3 0.26 8.9E-06 51.7 6.5 40 22-61 172-211 (466)
298 2ew2_A 2-dehydropantoate 2-red 91.3 0.17 5.9E-06 49.7 4.9 33 23-55 4-36 (316)
299 3ntd_A FAD-dependent pyridine 91.2 0.17 5.7E-06 54.5 5.1 36 24-59 153-188 (565)
300 3lk7_A UDP-N-acetylmuramoylala 91.1 0.2 6.9E-06 52.5 5.4 35 22-56 9-43 (451)
301 2rgh_A Alpha-glycerophosphate 90.9 0.4 1.4E-05 51.8 7.8 39 21-59 31-69 (571)
302 3cty_A Thioredoxin reductase; 90.9 0.18 6.1E-06 49.7 4.5 36 23-58 156-191 (319)
303 3gg2_A Sugar dehydrogenase, UD 90.9 0.19 6.3E-06 52.8 4.9 33 23-55 3-35 (450)
304 4a7p_A UDP-glucose dehydrogena 90.7 0.21 7.2E-06 52.3 5.1 35 22-56 8-42 (446)
305 3qha_A Putative oxidoreductase 90.7 0.19 6.7E-06 49.4 4.6 35 22-56 15-49 (296)
306 3s5w_A L-ornithine 5-monooxyge 90.7 0.15 5.1E-06 53.3 4.0 36 22-57 227-264 (463)
307 3urh_A Dihydrolipoyl dehydroge 90.7 0.24 8.2E-06 52.3 5.6 38 23-60 199-236 (491)
308 3oc4_A Oxidoreductase, pyridin 90.7 0.23 7.9E-06 51.9 5.4 38 23-60 148-185 (452)
309 3dk9_A Grase, GR, glutathione 90.7 0.21 7.2E-06 52.5 5.1 38 22-59 187-224 (478)
310 3g79_A NDP-N-acetyl-D-galactos 90.7 0.23 7.8E-06 52.5 5.3 34 23-56 19-54 (478)
311 3e8x_A Putative NAD-dependent 90.6 0.21 7.2E-06 46.9 4.6 35 21-55 20-55 (236)
312 3itj_A Thioredoxin reductase 1 90.5 0.21 7.1E-06 49.2 4.7 37 23-59 174-210 (338)
313 1mv8_A GMD, GDP-mannose 6-dehy 90.5 0.2 6.9E-06 52.2 4.7 32 24-55 2-33 (436)
314 2cul_A Glucose-inhibited divis 90.5 0.55 1.9E-05 44.1 7.4 52 279-333 68-120 (232)
315 3dfz_A SIRC, precorrin-2 dehyd 90.4 0.25 8.4E-06 46.7 4.8 36 19-54 28-63 (223)
316 1zej_A HBD-9, 3-hydroxyacyl-CO 90.4 0.24 8.1E-06 48.9 4.8 33 22-55 12-44 (293)
317 2gf3_A MSOX, monomeric sarcosi 90.3 0.44 1.5E-05 48.1 7.0 37 22-58 3-39 (389)
318 3ab1_A Ferredoxin--NADP reduct 90.3 0.21 7.3E-06 50.1 4.6 37 23-59 164-200 (360)
319 1mo9_A ORF3; nucleotide bindin 90.1 0.25 8.6E-06 52.7 5.1 38 23-60 215-252 (523)
320 1z82_A Glycerol-3-phosphate de 89.9 0.27 9.2E-06 49.2 4.9 33 22-54 14-46 (335)
321 3cgv_A Geranylgeranyl reductas 89.9 0.37 1.3E-05 48.7 6.1 52 279-332 102-156 (397)
322 3gpi_A NAD-dependent epimerase 89.9 0.3 1E-05 47.2 5.1 34 23-56 4-37 (286)
323 3pef_A 6-phosphogluconate dehy 89.9 0.27 9.1E-06 48.0 4.7 34 23-56 2-35 (287)
324 3g17_A Similar to 2-dehydropan 89.8 0.19 6.4E-06 49.4 3.6 33 23-55 3-35 (294)
325 4dio_A NAD(P) transhydrogenase 89.8 0.27 9.4E-06 50.6 4.9 34 23-56 191-224 (405)
326 1kyq_A Met8P, siroheme biosynt 89.8 0.16 5.6E-06 49.5 3.1 38 19-56 10-47 (274)
327 2uyy_A N-PAC protein; long-cha 89.8 0.33 1.1E-05 48.0 5.4 35 22-56 30-64 (316)
328 3dfu_A Uncharacterized protein 89.8 0.15 5.2E-06 48.4 2.8 33 22-54 6-38 (232)
329 2x8g_A Thioredoxin glutathione 89.7 0.24 8.1E-06 53.8 4.7 32 23-54 287-318 (598)
330 2x5o_A UDP-N-acetylmuramoylala 89.7 0.18 6.2E-06 52.6 3.6 35 23-57 6-40 (439)
331 3ics_A Coenzyme A-disulfide re 89.7 0.3 1E-05 52.8 5.5 38 23-60 188-225 (588)
332 2vns_A Metalloreductase steap3 89.7 0.3 1E-05 45.6 4.8 33 23-55 29-61 (215)
333 4dll_A 2-hydroxy-3-oxopropiona 89.7 0.31 1.1E-05 48.5 5.1 34 22-55 31-64 (320)
334 3lad_A Dihydrolipoamide dehydr 89.6 0.34 1.2E-05 50.8 5.7 37 23-59 181-217 (476)
335 3ggo_A Prephenate dehydrogenas 89.5 0.37 1.3E-05 47.9 5.5 33 23-55 34-68 (314)
336 2weu_A Tryptophan 5-halogenase 89.5 0.72 2.4E-05 48.8 8.1 34 23-56 3-39 (511)
337 2ewd_A Lactate dehydrogenase,; 89.5 0.3 1E-05 48.6 4.8 33 23-55 5-38 (317)
338 3hwr_A 2-dehydropantoate 2-red 89.5 0.3 1E-05 48.6 4.8 34 21-55 18-51 (318)
339 1lld_A L-lactate dehydrogenase 89.4 0.3 1E-05 48.4 4.8 33 23-55 8-42 (319)
340 3f8d_A Thioredoxin reductase ( 89.4 0.29 1E-05 47.7 4.7 37 23-59 155-191 (323)
341 1hyu_A AHPF, alkyl hydroperoxi 89.4 0.24 8E-06 53.0 4.2 36 23-58 356-391 (521)
342 1xdi_A RV3303C-LPDA; reductase 89.3 0.37 1.3E-05 51.0 5.7 38 23-60 183-220 (499)
343 2e4g_A Tryptophan halogenase; 89.3 0.73 2.5E-05 49.4 8.1 36 21-56 24-62 (550)
344 4g65_A TRK system potassium up 89.2 0.2 6.8E-06 52.8 3.4 34 22-55 3-36 (461)
345 4huj_A Uncharacterized protein 89.2 0.2 7E-06 46.9 3.1 34 22-55 23-57 (220)
346 3ktd_A Prephenate dehydrogenas 89.1 0.38 1.3E-05 48.5 5.2 33 23-55 9-41 (341)
347 3pid_A UDP-glucose 6-dehydroge 89.0 0.32 1.1E-05 50.6 4.8 34 22-56 36-69 (432)
348 2zyd_A 6-phosphogluconate dehy 89.0 0.32 1.1E-05 51.5 4.8 36 20-55 13-48 (480)
349 1jay_A Coenzyme F420H2:NADP+ o 89.0 0.35 1.2E-05 44.7 4.6 32 24-55 2-34 (212)
350 3l6d_A Putative oxidoreductase 88.9 0.41 1.4E-05 47.3 5.3 34 22-55 9-42 (306)
351 3mog_A Probable 3-hydroxybutyr 88.8 0.36 1.2E-05 51.1 5.1 33 23-55 6-38 (483)
352 3oj0_A Glutr, glutamyl-tRNA re 88.8 0.19 6.6E-06 43.5 2.5 33 23-55 22-54 (144)
353 3atr_A Conserved archaeal prot 88.8 0.73 2.5E-05 48.0 7.4 37 21-57 5-41 (453)
354 3p2y_A Alanine dehydrogenase/p 88.6 0.29 9.8E-06 50.0 3.9 33 23-55 185-217 (381)
355 2hjr_A Malate dehydrogenase; m 88.5 0.43 1.5E-05 47.8 5.2 33 23-55 15-48 (328)
356 3r9u_A Thioredoxin reductase; 88.5 0.37 1.3E-05 46.8 4.7 35 23-57 148-182 (315)
357 3pdu_A 3-hydroxyisobutyrate de 88.5 0.29 9.8E-06 47.8 3.8 33 24-56 3-35 (287)
358 2vdc_G Glutamate synthase [NAD 88.5 0.5 1.7E-05 49.5 5.9 36 22-57 264-300 (456)
359 3lzw_A Ferredoxin--NADP reduct 88.5 0.38 1.3E-05 47.1 4.8 37 23-59 155-191 (332)
360 1evy_A Glycerol-3-phosphate de 88.5 0.32 1.1E-05 49.2 4.3 32 24-55 17-48 (366)
361 3ojo_A CAP5O; rossmann fold, c 88.5 0.35 1.2E-05 50.3 4.6 33 24-56 13-45 (431)
362 1x0v_A GPD-C, GPDH-C, glycerol 88.4 0.24 8.3E-06 49.8 3.3 35 22-56 8-49 (354)
363 1txg_A Glycerol-3-phosphate de 88.4 0.3 1E-05 48.5 4.0 30 24-53 2-31 (335)
364 2x3n_A Probable FAD-dependent 88.4 0.67 2.3E-05 47.1 6.7 37 21-57 5-41 (399)
365 4gwg_A 6-phosphogluconate dehy 88.3 0.42 1.4E-05 50.5 5.2 35 21-55 3-37 (484)
366 2rcy_A Pyrroline carboxylate r 88.3 0.38 1.3E-05 46.0 4.5 36 21-56 3-42 (262)
367 1t2d_A LDH-P, L-lactate dehydr 88.2 0.48 1.6E-05 47.3 5.3 33 23-55 5-38 (322)
368 1dlj_A UDP-glucose dehydrogena 88.2 0.35 1.2E-05 49.8 4.4 31 24-55 2-32 (402)
369 3l9w_A Glutathione-regulated p 88.2 0.41 1.4E-05 49.6 4.9 34 23-56 5-38 (413)
370 1fec_A Trypanothione reductase 88.1 1 3.5E-05 47.5 8.1 43 21-63 2-53 (490)
371 3ego_A Probable 2-dehydropanto 88.1 0.43 1.5E-05 47.2 4.8 32 23-55 3-34 (307)
372 2v6b_A L-LDH, L-lactate dehydr 88.1 0.43 1.5E-05 47.2 4.8 32 24-55 2-35 (304)
373 3iwa_A FAD-dependent pyridine 88.0 0.97 3.3E-05 47.3 7.8 37 22-58 3-41 (472)
374 2wpf_A Trypanothione reductase 88.0 1.1 3.7E-05 47.4 8.2 43 21-63 6-57 (495)
375 3tl2_A Malate dehydrogenase; c 87.9 0.5 1.7E-05 47.0 5.2 35 20-54 6-41 (315)
376 2pzm_A Putative nucleotide sug 87.8 0.57 1.9E-05 46.4 5.5 42 14-55 12-54 (330)
377 3nix_A Flavoprotein/dehydrogen 87.7 0.79 2.7E-05 46.8 6.7 37 21-57 4-40 (421)
378 3dgz_A Thioredoxin reductase 2 87.6 0.62 2.1E-05 49.1 6.0 34 23-56 186-219 (488)
379 2q3e_A UDP-glucose 6-dehydroge 87.6 0.42 1.4E-05 50.3 4.6 33 23-55 6-40 (467)
380 2h78_A Hibadh, 3-hydroxyisobut 87.5 0.45 1.5E-05 46.7 4.6 33 23-55 4-36 (302)
381 3cky_A 2-hydroxymethyl glutara 87.5 0.48 1.7E-05 46.3 4.8 33 23-55 5-37 (301)
382 2gmh_A Electron transfer flavo 87.5 1.1 3.8E-05 48.5 8.0 53 279-332 144-211 (584)
383 3qfa_A Thioredoxin reductase 1 87.4 0.67 2.3E-05 49.4 6.1 33 23-55 211-243 (519)
384 1guz_A Malate dehydrogenase; o 87.2 0.53 1.8E-05 46.6 4.9 32 24-55 2-35 (310)
385 3o0h_A Glutathione reductase; 87.2 1.1 3.8E-05 47.0 7.7 42 21-63 25-66 (484)
386 2qyt_A 2-dehydropantoate 2-red 87.1 0.37 1.3E-05 47.4 3.7 31 23-53 9-45 (317)
387 1nyt_A Shikimate 5-dehydrogena 87.1 0.67 2.3E-05 44.9 5.5 33 23-55 120-152 (271)
388 2f1k_A Prephenate dehydrogenas 87.1 0.55 1.9E-05 45.4 4.9 32 24-55 2-33 (279)
389 1m6i_A Programmed cell death p 87.0 1.3 4.6E-05 46.6 8.2 39 20-58 9-49 (493)
390 3fbs_A Oxidoreductase; structu 87.0 0.5 1.7E-05 45.5 4.5 33 23-56 142-174 (297)
391 2o3j_A UDP-glucose 6-dehydroge 87.0 0.52 1.8E-05 49.8 4.9 33 23-55 10-44 (481)
392 4ffl_A PYLC; amino acid, biosy 87.0 0.54 1.8E-05 47.4 4.9 33 24-56 3-35 (363)
393 3eag_A UDP-N-acetylmuramate:L- 86.9 0.55 1.9E-05 46.8 4.9 34 23-56 5-39 (326)
394 1x13_A NAD(P) transhydrogenase 86.9 0.5 1.7E-05 48.7 4.6 33 23-55 173-205 (401)
395 4b1b_A TRXR, thioredoxin reduc 86.9 0.63 2.1E-05 50.0 5.5 37 23-59 224-260 (542)
396 4ezb_A Uncharacterized conserv 86.8 0.49 1.7E-05 47.1 4.4 33 23-55 25-58 (317)
397 2gf2_A Hibadh, 3-hydroxyisobut 86.8 0.56 1.9E-05 45.7 4.8 32 24-55 2-33 (296)
398 2iz1_A 6-phosphogluconate dehy 86.7 0.59 2E-05 49.3 5.2 34 22-55 5-38 (474)
399 2ywl_A Thioredoxin reductase r 86.7 1.5 5.2E-05 38.9 7.3 50 279-333 56-105 (180)
400 1yqg_A Pyrroline-5-carboxylate 86.6 0.5 1.7E-05 45.2 4.3 32 24-55 2-34 (263)
401 3c4n_A Uncharacterized protein 86.4 0.34 1.2E-05 49.7 3.1 40 21-60 35-76 (405)
402 2aqj_A Tryptophan halogenase, 86.4 1.4 4.7E-05 47.1 7.9 37 21-57 4-43 (538)
403 4dna_A Probable glutathione re 86.3 1.2 4.2E-05 46.4 7.4 42 21-63 4-45 (463)
404 3ius_A Uncharacterized conserv 86.3 0.59 2E-05 45.0 4.6 33 23-55 6-38 (286)
405 1cjc_A Protein (adrenodoxin re 86.2 0.55 1.9E-05 49.3 4.6 35 23-57 146-201 (460)
406 2qcu_A Aerobic glycerol-3-phos 86.2 1.4 4.6E-05 46.7 7.7 40 20-59 1-40 (501)
407 1jw9_B Molybdopterin biosynthe 86.1 0.55 1.9E-05 45.0 4.2 32 23-54 32-64 (249)
408 3ew7_A LMO0794 protein; Q8Y8U8 86.1 0.71 2.4E-05 42.3 4.9 32 24-55 2-34 (221)
409 1l7d_A Nicotinamide nucleotide 86.0 0.64 2.2E-05 47.5 4.9 33 23-55 173-205 (384)
410 3tri_A Pyrroline-5-carboxylate 85.9 0.73 2.5E-05 44.9 5.0 34 22-55 3-39 (280)
411 3gvi_A Malate dehydrogenase; N 85.9 0.74 2.5E-05 46.0 5.1 36 20-55 5-41 (324)
412 3dgh_A TRXR-1, thioredoxin red 85.8 0.88 3E-05 47.8 6.0 33 23-55 188-220 (483)
413 1vpd_A Tartronate semialdehyde 85.8 0.66 2.3E-05 45.3 4.7 33 23-55 6-38 (299)
414 2aef_A Calcium-gated potassium 85.8 0.34 1.1E-05 45.7 2.4 32 23-55 10-41 (234)
415 2pgd_A 6-phosphogluconate dehy 85.8 0.68 2.3E-05 48.9 5.1 33 23-55 3-35 (482)
416 1hdo_A Biliverdin IX beta redu 85.8 0.78 2.7E-05 41.5 4.9 33 23-55 4-37 (206)
417 2wtb_A MFP2, fatty acid multif 85.7 0.56 1.9E-05 52.2 4.6 33 23-55 313-345 (725)
418 2p4q_A 6-phosphogluconate dehy 85.6 0.69 2.3E-05 49.1 5.0 33 23-55 11-43 (497)
419 3c24_A Putative oxidoreductase 85.6 0.68 2.3E-05 45.0 4.7 33 23-55 12-45 (286)
420 2g5c_A Prephenate dehydrogenas 85.6 0.71 2.4E-05 44.6 4.8 32 24-55 3-36 (281)
421 2gqf_A Hypothetical protein HI 85.5 1.6 5.4E-05 44.8 7.6 60 271-332 101-162 (401)
422 3k31_A Enoyl-(acyl-carrier-pro 85.4 1.1 3.7E-05 43.8 6.1 35 21-55 29-66 (296)
423 1a5z_A L-lactate dehydrogenase 85.4 0.61 2.1E-05 46.4 4.2 32 24-55 2-35 (319)
424 1pjc_A Protein (L-alanine dehy 85.4 0.7 2.4E-05 46.8 4.8 33 23-55 168-200 (361)
425 2pyx_A Tryptophan halogenase; 85.3 1.8 6.2E-05 46.0 8.2 36 21-56 6-53 (526)
426 2eez_A Alanine dehydrogenase; 85.2 0.71 2.4E-05 46.9 4.8 33 23-55 167-199 (369)
427 3p7m_A Malate dehydrogenase; p 85.2 0.88 3E-05 45.3 5.3 35 21-55 4-39 (321)
428 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.0 0.73 2.5E-05 48.7 4.8 32 24-55 3-34 (478)
429 1np3_A Ketol-acid reductoisome 85.0 0.77 2.6E-05 46.1 4.8 33 23-55 17-49 (338)
430 3h2s_A Putative NADH-flavin re 85.0 0.83 2.8E-05 42.1 4.8 32 24-55 2-34 (224)
431 3e1t_A Halogenase; flavoprotei 85.0 1.4 4.8E-05 46.6 7.1 38 20-57 5-42 (512)
432 1w6u_A 2,4-dienoyl-COA reducta 84.9 1.5 5E-05 42.7 6.7 46 10-55 14-60 (302)
433 4b4o_A Epimerase family protei 84.9 0.91 3.1E-05 44.1 5.2 34 24-57 2-36 (298)
434 3phh_A Shikimate dehydrogenase 84.8 0.88 3E-05 44.2 4.9 34 22-55 118-151 (269)
435 1yj8_A Glycerol-3-phosphate de 84.6 0.53 1.8E-05 47.8 3.5 33 24-56 23-62 (375)
436 1p77_A Shikimate 5-dehydrogena 84.6 0.75 2.6E-05 44.6 4.4 33 23-55 120-152 (272)
437 2zxi_A TRNA uridine 5-carboxym 84.5 1.8 6.3E-05 47.1 7.8 38 21-58 26-64 (637)
438 2wdq_A Succinate dehydrogenase 84.4 1.8 6.1E-05 46.9 7.7 42 20-61 5-46 (588)
439 3d1l_A Putative NADP oxidoredu 84.3 0.73 2.5E-05 44.2 4.2 33 23-55 11-44 (266)
440 1o94_A Tmadh, trimethylamine d 84.3 0.69 2.3E-05 51.6 4.5 36 23-59 529-566 (729)
441 1ur5_A Malate dehydrogenase; o 84.3 0.91 3.1E-05 44.9 4.9 33 23-55 3-36 (309)
442 2cvz_A Dehydrogenase, 3-hydrox 84.3 0.77 2.6E-05 44.4 4.3 31 24-55 3-33 (289)
443 3c7a_A Octopine dehydrogenase; 84.3 0.52 1.8E-05 48.4 3.2 30 23-52 3-33 (404)
444 1hyh_A L-hicdh, L-2-hydroxyiso 84.2 0.73 2.5E-05 45.5 4.2 32 24-55 3-36 (309)
445 3i3l_A Alkylhalidase CMLS; fla 84.2 1.2 4.3E-05 48.2 6.3 42 18-59 19-60 (591)
446 1w4x_A Phenylacetone monooxyge 84.1 0.86 3E-05 48.8 5.0 35 22-56 186-220 (542)
447 1wdk_A Fatty oxidation complex 84.1 0.63 2.2E-05 51.7 4.0 33 23-55 315-347 (715)
448 2gag_A Heterotetrameric sarcos 84.0 0.51 1.7E-05 54.4 3.3 37 23-59 285-321 (965)
449 2egg_A AROE, shikimate 5-dehyd 84.0 1.1 3.8E-05 44.1 5.4 34 22-55 141-175 (297)
450 2bs2_A Quinol-fumarate reducta 83.9 1.9 6.4E-05 47.5 7.6 41 21-61 4-44 (660)
451 2vhw_A Alanine dehydrogenase; 83.8 0.89 3.1E-05 46.3 4.8 33 23-55 169-201 (377)
452 2ahr_A Putative pyrroline carb 83.8 0.93 3.2E-05 43.2 4.6 33 23-55 4-36 (259)
453 1edz_A 5,10-methylenetetrahydr 83.7 1.1 3.8E-05 44.5 5.2 43 21-63 176-227 (320)
454 4id9_A Short-chain dehydrogena 83.7 0.94 3.2E-05 44.9 4.8 36 22-57 19-55 (347)
455 1pjq_A CYSG, siroheme synthase 83.6 0.85 2.9E-05 47.8 4.6 35 20-54 10-44 (457)
456 3dhn_A NAD-dependent epimerase 83.5 0.85 2.9E-05 42.2 4.1 33 23-55 5-38 (227)
457 2h88_A Succinate dehydrogenase 83.4 1.7 6E-05 47.3 7.1 42 20-61 16-57 (621)
458 3gvx_A Glycerate dehydrogenase 83.2 1.7 5.7E-05 42.7 6.2 47 8-56 110-156 (290)
459 4gbj_A 6-phosphogluconate dehy 83.1 0.85 2.9E-05 44.9 4.1 33 24-56 7-39 (297)
460 3zwc_A Peroxisomal bifunctiona 83.1 1.3 4.6E-05 49.2 6.1 35 22-56 316-350 (742)
461 3gt0_A Pyrroline-5-carboxylate 83.1 1.1 3.9E-05 42.4 4.9 33 23-55 3-39 (247)
462 2e1m_B L-glutamate oxidase; L- 83.1 0.47 1.6E-05 40.7 1.9 54 322-377 3-57 (130)
463 1y6j_A L-lactate dehydrogenase 82.9 1.2 4E-05 44.3 5.1 34 22-55 7-42 (318)
464 3q2o_A Phosphoribosylaminoimid 82.8 1.5 5.1E-05 44.6 6.0 33 23-55 15-47 (389)
465 1gte_A Dihydropyrimidine dehyd 82.8 0.91 3.1E-05 52.6 4.8 33 24-56 334-367 (1025)
466 1i36_A Conserved hypothetical 82.6 1 3.5E-05 43.0 4.4 30 24-53 2-31 (264)
467 2hk9_A Shikimate dehydrogenase 82.6 0.95 3.2E-05 43.9 4.2 34 22-55 129-162 (275)
468 1n7h_A GDP-D-mannose-4,6-dehyd 82.5 1.1 3.8E-05 45.1 4.9 34 23-56 29-63 (381)
469 2a9f_A Putative malic enzyme ( 82.4 1.1 3.8E-05 45.7 4.7 35 21-55 187-222 (398)
470 2rir_A Dipicolinate synthase, 82.4 1.1 3.9E-05 43.9 4.7 34 22-55 157-190 (300)
471 3dqp_A Oxidoreductase YLBE; al 82.4 1 3.5E-05 41.5 4.2 32 24-55 2-34 (219)
472 3b1f_A Putative prephenate deh 82.4 0.98 3.4E-05 43.9 4.2 33 23-55 7-41 (290)
473 1k0i_A P-hydroxybenzoate hydro 82.3 1.3 4.6E-05 44.7 5.4 52 279-332 103-157 (394)
474 3pqe_A L-LDH, L-lactate dehydr 82.3 1.2 4.1E-05 44.5 4.8 33 22-54 5-39 (326)
475 3o38_A Short chain dehydrogena 82.3 1.8 6.2E-05 41.2 6.1 34 22-55 22-57 (266)
476 2d5c_A AROE, shikimate 5-dehyd 82.3 1.5 5.1E-05 42.1 5.4 32 24-55 118-149 (263)
477 1rp0_A ARA6, thiazole biosynth 82.1 2.3 8E-05 41.1 6.8 53 279-333 119-186 (284)
478 3k30_A Histamine dehydrogenase 82.0 0.94 3.2E-05 50.1 4.4 39 23-61 524-564 (690)
479 1vl6_A Malate oxidoreductase; 82.0 1.2 4E-05 45.4 4.7 34 21-54 191-225 (388)
480 1yb4_A Tartronic semialdehyde 81.9 0.95 3.2E-05 44.0 3.9 31 24-55 5-35 (295)
481 3ces_A MNMG, tRNA uridine 5-ca 81.8 2.2 7.4E-05 46.7 7.0 35 21-55 27-61 (651)
482 3f9i_A 3-oxoacyl-[acyl-carrier 81.6 1.4 4.7E-05 41.5 4.8 42 13-54 5-47 (249)
483 1nvt_A Shikimate 5'-dehydrogen 81.6 1.4 4.7E-05 43.0 4.9 32 23-55 129-160 (287)
484 3ond_A Adenosylhomocysteinase; 81.5 1.3 4.3E-05 46.7 4.8 34 22-55 265-298 (488)
485 1wwk_A Phosphoglycerate dehydr 81.4 2.5 8.4E-05 41.7 6.8 36 21-56 141-176 (307)
486 1ff9_A Saccharopine reductase; 81.4 1.2 4.1E-05 46.6 4.7 33 23-55 4-36 (450)
487 3d4o_A Dipicolinate synthase s 81.4 1.3 4.4E-05 43.3 4.7 34 22-55 155-188 (293)
488 2dbq_A Glyoxylate reductase; D 81.4 2.5 8.6E-05 42.2 6.9 36 21-56 149-184 (334)
489 3orf_A Dihydropteridine reduct 81.3 1.5 5E-05 41.6 5.0 45 10-56 12-57 (251)
490 3ek2_A Enoyl-(acyl-carrier-pro 81.2 1.4 4.8E-05 42.0 4.8 38 18-55 10-50 (271)
491 3hg7_A D-isomer specific 2-hyd 81.2 2.5 8.6E-05 42.1 6.7 46 8-55 128-173 (324)
492 2z1m_A GDP-D-mannose dehydrata 80.9 1.5 5.2E-05 43.1 5.1 34 23-56 4-38 (345)
493 2ekl_A D-3-phosphoglycerate de 80.7 2.7 9.2E-05 41.6 6.8 36 21-56 141-176 (313)
494 3qvo_A NMRA family protein; st 80.6 1.1 3.9E-05 41.9 3.8 33 23-55 24-58 (236)
495 1oju_A MDH, malate dehydrogena 80.6 1.2 4.2E-05 43.7 4.2 32 24-55 2-35 (294)
496 2q1w_A Putative nucleotide sug 80.6 1.5 5.2E-05 43.2 5.0 43 11-55 12-55 (333)
497 2gcg_A Glyoxylate reductase/hy 80.5 2.1 7.2E-05 42.7 6.0 35 21-55 154-188 (330)
498 4gx0_A TRKA domain protein; me 80.3 1.4 4.7E-05 47.4 4.8 34 23-56 349-382 (565)
499 3pp8_A Glyoxylate/hydroxypyruv 80.3 2.9 9.9E-05 41.5 6.8 47 8-56 127-173 (315)
500 1a4i_A Methylenetetrahydrofola 80.3 2.1 7.2E-05 42.0 5.7 36 19-54 162-198 (301)
No 1
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=1.5e-57 Score=498.15 Aligned_cols=418 Identities=31% Similarity=0.518 Sum_probs=326.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCC-----------------
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSV----------------- 82 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~----------------- 82 (539)
+.+|||+|||||+.|++.|++|++.|++|+|+|+|++|||.+.++++.++.+|+...+.....
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEEA 85 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEEE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchhh
Confidence 457999999999999999999999999999999999999999999999999998766531000
Q ss_pred ----CCCCccccccccccc-------------------------------------------------------------
Q 009226 83 ----CPDPLYSDVEISNYA------------------------------------------------------------- 97 (539)
Q Consensus 83 ----~~~~~~~~~~~~~~~------------------------------------------------------------- 97 (539)
.....+++.++.++.
T Consensus 86 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (650)
T 1vg0_A 86 IPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCPG 165 (650)
T ss_dssp EEBCSSCCCEEEEEEEECSCC-----------------------------------------------------------
T ss_pred ccccccccccccceeEeecccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 000001111000000
Q ss_pred -------------------------------------------cc-----cccCCCCCeEEecCCCEEEecChHHHHHHh
Q 009226 98 -------------------------------------------SR-----LLSQHPRNFNLDVSGPRVLFCADHAVDLML 129 (539)
Q Consensus 98 -------------------------------------------~~-----~~~~~~~~f~ldl~Gp~ll~~~~~lv~~L~ 129 (539)
.+ .+.+..|+|+||+. |+++++++.++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~-PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 166 PESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLV-SKLLYSRGLLIDLLI 244 (650)
T ss_dssp ---------------------------------------------CCCHHHHHHTGGGCCEESS-CCCEESSSHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeC-CeeeeCCcHHHHHHH
Confidence 00 00125799999995 999999999999999
Q ss_pred cCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHHHHHHHHHHhhcccCccccccccccccccCCc
Q 009226 130 KSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSP 209 (539)
Q Consensus 130 ~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (539)
++|+.+|++|+.++..|++. +|+++++|+++.++|+++.+++.+|+.+|||++.+.++.. .+ ..+..+...|
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~-~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p------~~~~~~d~~S 316 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFR-EGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP------DEYRAYEGTT 316 (650)
T ss_dssp HHTGGGGCCEEECCEEEEES-SSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH------HHHHTTTTSB
T ss_pred HcCCcceeeEEEccceEEec-CCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch------HHHhhhccCC
Confidence 99999999999999988874 8899999999999999999999999999999999887532 11 1123566899
Q ss_pred HHHHHHhcCCChhHHHHHHHHHhcccCCcchhhhhccchhHHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHH
Q 009226 210 FAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRA 289 (539)
Q Consensus 210 ~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~ 289 (539)
+.+||+++++++.++.++.+++++..... .++..++.++..|+.++++||.+ +++||+||+|+|+|+|||++
T Consensus 317 ~~d~L~~~~ls~~L~~~L~~~lal~~~~~------~pa~~~l~~i~~~l~sl~~yg~s--g~~yp~GG~g~L~qaL~r~~ 388 (650)
T 1vg0_A 317 FSEYLKTQKLTPNLQYFVLHSIAMTSETT------SCTVDGLKATKKFLQCLGRYGNT--PFLFPLYGQGELPQCFCRMC 388 (650)
T ss_dssp HHHHHTTSSSCHHHHHHHHHHTTC--CCS------CBHHHHHHHHHHHHHHTTSSSSS--SEEEETTCTTHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHhccCCCC------CchhHHHHHHHHHHHHHHhhccC--ceEEeCCchhHHHHHHHHHH
Confidence 99999999999999999988776653221 24667777888999999999863 48999999999999999999
Q ss_pred HHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEE
Q 009226 290 AVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGI 369 (539)
Q Consensus 290 a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i 369 (539)
+++||+|+||++|++|.++.++|++++|++.+|++++||+||++|.++ +... . .+...++++|++
T Consensus 389 ~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~l-p~~~---~-----------~~~~~~~v~R~i 453 (650)
T 1vg0_A 389 AVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYL-SENT---C-----------SRVQYRQISRAV 453 (650)
T ss_dssp HHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGB-CTTT---T-----------TTCCCEEEEEEE
T ss_pred HHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhc-CHhH---h-----------ccccccceEEEE
Confidence 999999999999999998731288999988889999999999987765 3211 0 111246799999
Q ss_pred EEecCCCCCCC---CceEEEeCCCCCCCCCCceEEEEEeCCCCccCCCCcEEEEEEEeeccccchHHHHHHHHHHHHhhh
Q 009226 370 CITRSSLKPDL---SNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQKLL 446 (539)
Q Consensus 370 ~I~~~~l~~~~---~~~~~~~p~~~~~~~~~~~v~v~~~ss~~~~cP~G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~~ 446 (539)
+|+++|+.+.. ..+++++|+.+ + ..++||++++|++++.||+|++|+|++|.. ..+++++|++++++|+...
T Consensus 454 ~i~~~pi~~~~~~~~~~~iiiP~~~-g--~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~~--~~~~~~eLe~~l~~L~~~~ 528 (650)
T 1vg0_A 454 LITDGSVLRTDADQQVSILTVPAEE-P--GSFAVRVIELCSSTMTCMKGTYLVHLTCMS--SKTAREDLERVVQKLFTPY 528 (650)
T ss_dssp EEESSCSSCCSCCCCCEEEEECCSS-T--TSCCEEEEEECGGGTSSCTTCEEEEEEEEC--SSCHHHHHHHHHHHHCBSC
T ss_pred EEecCCCCCcCCCcceEEEEccCcc-C--CCCCEEEEEeCCCCCCCCCCCEEEEEEeec--CCCHHHHHHHHHHHHhccc
Confidence 99999986542 34788888765 2 367899999999999999999999999873 3588999999999998532
Q ss_pred hcCCCCCCCCccccccccCCcceEeEEeEEEEcCcc
Q 009226 447 VTGTAGNSSTAQSEDMEEAKPTLLWSALYIQDLSLG 482 (539)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~p~ilw~~~~~~~~~~~ 482 (539)
. +++.++.+..+|+|||++||+|.+..+
T Consensus 529 -~-------~~~~~~~~~~~~~vLws~~~~~~~~~~ 556 (650)
T 1vg0_A 529 -T-------EIEAENEQVEKPRLLWALYFNMRDSSD 556 (650)
T ss_dssp -S-------CCC-------CCBEEEEEEEEEEECTT
T ss_pred -c-------ccccccccccCCceEEEEEEEeecccc
Confidence 1 111223356789999999999987653
No 2
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.9e-54 Score=458.29 Aligned_cols=378 Identities=24% Similarity=0.423 Sum_probs=309.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
+++.|||||||||++|+++|+.|+++|++|+|+|+++++||++++++..++..|... +.++ .
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~-g~~~-------~---------- 78 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKP-KENI-------P---------- 78 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCT-TSCC-------C----------
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhccc-CCCc-------c----------
Confidence 456799999999999999999999999999999999999999999998876555532 2110 0
Q ss_pred ccccCCCCCeEEecCCCEEEecChHHHHHHhcCCcccccccccccceeeEc--------cCCceeecCCCHHHHHhccCC
Q 009226 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLD--------ADAKLCSVPDSRAAIFKDKSL 170 (539)
Q Consensus 99 ~~~~~~~~~f~ldl~Gp~ll~~~~~lv~~L~~s~~~~y~ef~~v~~~~~~~--------~~g~l~~vP~s~~~vf~~~~l 170 (539)
+.+ ...|+|++|+. |+++++.+.++++|.++++.+|++|+.++..|++. ++|+++++|+++.++|+++.+
T Consensus 79 ~~~-g~~R~y~iDL~-P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lL 156 (475)
T 3p1w_A 79 SKY-GENRHWNVDLI-PKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLL 156 (475)
T ss_dssp GGG-CCGGGCCEESS-CCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTS
T ss_pred ccc-ccccceEEeec-CeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCC
Confidence 112 35789999995 99999999999999999999999999999998764 257899999999999999999
Q ss_pred ChhhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCcchhhhhccchhH
Q 009226 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDG 250 (539)
Q Consensus 171 s~~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~ 250 (539)
++.+|+++|+|+..+.++....+.. .. ..+....|+.+|++++++++.+++++.+++++.... +. ...++.++
T Consensus 157 s~~eK~~l~kFL~~l~~~~~~~~~~---~~-~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~-~~--~~~~a~~~ 229 (475)
T 3p1w_A 157 SLMEKNRCKNFYQYVSEWDANKRNT---WD-NLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLND-DY--LKQPAYLT 229 (475)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTCGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSS-GG--GGSBHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhhccchh---hh-cccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCC-Cc--ccCCHHHH
Confidence 9999999999999988764321110 00 012346899999999999999999988887775321 11 22467889
Q ss_pred HHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEE
Q 009226 251 INRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKL 330 (539)
Q Consensus 251 l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~V 330 (539)
+.+++.|+.|+++||++ +++||+||+++|+++|+|.+++.||+|+++++|++|..+ ++|++++|++.+|++++||+|
T Consensus 230 l~ri~~y~~Sl~~yg~s--~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d-~~g~v~gV~~~~G~~i~Ad~V 306 (475)
T 3p1w_A 230 LERIKLYMQSISAFGKS--PFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFD-DDNKVCGIKSSDGEIAYCDKV 306 (475)
T ss_dssp HHHHHHHHHHHHHHSSC--SEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCC--ceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEe-cCCeEEEEEECCCcEEECCEE
Confidence 99999999999999854 489999999999999999999999999999999999984 278889999999999999999
Q ss_pred EECCCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC--CCceEEEeCCCCCCCCCCceEEEEEeCCC
Q 009226 331 VLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (539)
Q Consensus 331 I~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~--~~~~~~~~p~~~~~~~~~~~v~v~~~ss~ 408 (539)
|+++++.. .+ |+. ....+.++|+|+|+++|+.+. .+.++++||+.+++ ..++||++++|++
T Consensus 307 I~a~~~~~-~~--------p~~------~~~~~~v~R~i~I~~~pi~~~~~~~~~~i~~P~~~~~--~~~~iy~~~~s~~ 369 (475)
T 3p1w_A 307 ICDPSYVM-HL--------KNK------IKKIGQVIRCICILSNPIPETNQTNSCQIIIPQNQLN--RKSDIYINLVSFQ 369 (475)
T ss_dssp EECGGGCT-TS--------TTS------EEEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGGT--SSSCEEEEEEEGG
T ss_pred EECCCccc-cC--------ccc------ccccceEEEEEEEEeccCcccCCCceEEEEeCCcccC--CCCCEEEEEECCC
Confidence 99887641 11 100 012467999999999999763 35678999987764 3578999999999
Q ss_pred CccCCCCcEEEEEEEeeccccchHHHHHHHHHHHHh
Q 009226 409 LAVCPLGMFVLYFSALCDEVNQGKKLLHAALSALQK 444 (539)
Q Consensus 409 ~~~cP~G~~vi~~st~~~~~~~~~~~l~~~~~~l~~ 444 (539)
+++||+|+||+|+||.+.+ .+++++|++++++|..
T Consensus 370 ~~~cp~G~~i~~~st~~e~-~~~~~~l~~~l~~l~~ 404 (475)
T 3p1w_A 370 HGVTLKGKYIAIVSATVET-NNPIKEIEKPLELLGT 404 (475)
T ss_dssp GTSSCTTCEEEEEEEECCS-SCHHHHTHHHHHTTCS
T ss_pred cCcCCCCcEEEEEEeecCC-CCHHHHHHHHHHHhcc
Confidence 9999999999999998754 5899999999999983
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=5.3e-40 Score=351.58 Aligned_cols=376 Identities=24% Similarity=0.474 Sum_probs=283.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
+.++||||||||++||+||++|+++|++|+|||+++++||+++|++.++...+. +.+... . .. ...
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~-d~~~~~---------~--~~--~~~ 74 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKF-KQNPIS---------K--EE--RES 74 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHH-CSSCCC---------H--HH--HHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhcee-ccCCcc---------c--cC--cch
Confidence 356999999999999999999999999999999999999999999987632222 111000 0 00 000
Q ss_pred cccCCCCCeEEecCCCEEEecChHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHHH
Q 009226 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (539)
Q Consensus 100 ~~~~~~~~f~ldl~Gp~ll~~~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l~ 179 (539)
.+ ...+.|.+++. |+++++++.+.++|.+.|+.+|++|+.++..|.+. +|+.+++|.++.+.|.+..++..+|+.++
T Consensus 75 ~~-~~g~~~~~~l~-P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~~ 151 (453)
T 2bcg_G 75 KF-GKDRDWNVDLI-PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFK-QGKIYKVPANEIEAISSPLMGIFEKRRMK 151 (453)
T ss_dssp HH-CCGGGCCEESS-CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEE-TTEEEECCSSHHHHHHCTTSCHHHHHHHH
T ss_pred hc-ccccceeeccc-cceeecCcHHHHHHHhcCCccceEEEEccceeEEe-CCeEEECCCChHHHHhhhccchhhHHHHH
Confidence 01 13466888995 99999999999999999999999999998888764 89999999997788888888888999999
Q ss_pred HHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCcchhhhhccchhHHHHHHHHHH
Q 009226 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYNS 259 (539)
Q Consensus 180 kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~i~~~l~ 259 (539)
+|++.+.++....+.. .. ..+....|+.+|++++++++.+++++.+++++.....- ...++..++.++..|+.
T Consensus 152 ~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~---~~~p~~~~~~~~~~~~~ 224 (453)
T 2bcg_G 152 KFLEWISSYKEDDLST---HQ-GLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDY---LQQPARPSFERILLYCQ 224 (453)
T ss_dssp HHHHHHHHCBTTBGGG---ST-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGG---GGSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCchh---hh-ccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccc---cCCchHHHHHHHHHHHH
Confidence 9999887654221110 00 01245789999999999999999988776654321100 00134556666778888
Q ss_pred hhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCCC
Q 009226 260 SIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTVP 339 (539)
Q Consensus 260 s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~~~~ 339 (539)
++++++. ++|.||+||+++|+++|++.+++.||+|+++++|++|..+++++++++|++ +|++++||+||+++.....
T Consensus 225 s~~~~~~--~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 225 SVARYGK--SPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHSS--CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHhhcC--CceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 8888774 347899999999999999999999999999999999987521466778886 6889999999987543211
Q ss_pred CCCcccchhhhhhhhhcccCCCcc-eEEEEEEEecCCCCC--CCCceEEEeCCCCCCCCCCceEEEEEeCCCCccCCCCc
Q 009226 340 GSLASSHQQLQESFQAFSLSDNKG-KVARGICITRSSLKP--DLSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (539)
Q Consensus 340 ~l~~~~~~~l~~~~~~l~~~~~~~-~vsr~i~I~~~~l~~--~~~~~~~~~p~~~~~~~~~~~v~v~~~ss~~~~cP~G~ 416 (539)
. +. ... ...++++++++++.. ...+..+++|....+ .++.+|+.+.+..++.||+|+
T Consensus 302 ~--------l~----------~~~~~~~~~~~i~~~~~~~~~~~~~~~ii~~~~~~~--~~~~~~v~~~s~~d~~aP~G~ 361 (453)
T 2bcg_G 302 K--------CK----------STGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLG--RKSDIYVAIVSDAHNVCSKGH 361 (453)
T ss_dssp G--------EE----------EEEEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred h--------hc----------ccCCcceeEEEEEccccCCCCCCccEEEEeCccccC--CCCCEEEEEeCCCCCCCCCCc
Confidence 1 10 123 578889999998763 223567788865544 357899999998778999999
Q ss_pred EEEEEEEeeccccchHHHHHHHHHHHH
Q 009226 417 FVLYFSALCDEVNQGKKLLHAALSALQ 443 (539)
Q Consensus 417 ~vi~~st~~~~~~~~~~~l~~~~~~l~ 443 (539)
+++|++++++. .++++.|++++++|.
T Consensus 362 ~~~~v~~~~~~-~~~~~~l~~~~~~l~ 387 (453)
T 2bcg_G 362 YLAIISTIIET-DKPHIELEPAFKLLG 387 (453)
T ss_dssp EEEEEEEECCS-SCHHHHTHHHHGGGC
T ss_pred EEEEEEEecCC-CCHHHHHHHHHHHhh
Confidence 99999998865 467888998888865
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=3.1e-38 Score=335.95 Aligned_cols=370 Identities=27% Similarity=0.507 Sum_probs=281.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc-hhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
+.++||||||||++||++|++|+++|++|+|+|+++++||+++|++ +....+ .++.+.. ++..
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~-~~~~~~~-------~~~~-------- 67 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYK-RFQLLEG-------PPET-------- 67 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHH-HTTCTTC-------CCGG--------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHh-hccCCCC-------ChhH--------
Confidence 4579999999999999999999999999999999999999999998 432110 1111000 0000
Q ss_pred ccccCCCCCeEEecCCCEEEecChHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHH
Q 009226 99 RLLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 99 ~~~~~~~~~f~ldl~Gp~ll~~~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l 178 (539)
+ ...+.|.+|+ ||++++..+.+.++|.+.|+.+|++|+.++..|++. +|+.+.+|.++.+.+....++..+|+.+
T Consensus 68 --~-~~g~~~~~d~-gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~l~~~~~~~~~ 142 (433)
T 1d5t_A 68 --M-GRGRDWNVDL-IPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYK-GGKIYKVPSTETEALASNLMGMFEKRRF 142 (433)
T ss_dssp --G-CCGGGCCEES-SCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEE-TTEEEECCCSHHHHHHCSSSCHHHHHHH
T ss_pred --h-cccCceEEcc-CcceeeccchHHHHHHHcCCccceEEEEeCceEEee-CCEEEECCCCHHHHhhCcccChhhHHHH
Confidence 1 1336789999 599999999999999999999999999998877764 8899999999778888888888899999
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCcchhhhhccchhHHHHHHHHH
Q 009226 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~i~~~l 258 (539)
++|++.+.++....+.. .+ ..++...|+.+|+++++.++.+++++.+.+++... .++ ...++..++.++..|.
T Consensus 143 ~~~~~~~~~~~~~~p~~---~~-~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~-~~~--~~~p~~~~~~~~~~~~ 215 (433)
T 1d5t_A 143 RKFLVFVANFDENDPKT---FE-GVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRT-DDY--LDQPCLETINRIKLYS 215 (433)
T ss_dssp HHHHHHHHHCCTTCGGG---GT-TCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGG--GGSBSHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCchh---cc-ccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccC-CCc--cCCCHHHHHHHHHHHH
Confidence 99999887653211110 00 11345789999999999999999988766544311 111 1245666777777888
Q ss_pred HhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCCCC
Q 009226 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSFTV 338 (539)
Q Consensus 259 ~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~~~ 338 (539)
.+++++|. ++++||+||+++|+++|++.+++.|++|+++++|++|..+ ++++++|+ .+|++++||+||++....
T Consensus 216 ~s~~~~g~--~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~--~~~v~~v~-~~g~~~~ad~VV~a~~~~- 289 (433)
T 1d5t_A 216 ESLARYGK--SPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME--NGKVVGVK-SEGEVARCKQLICDPSYV- 289 (433)
T ss_dssp HSCCSSSC--CSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEE--TTEEEEEE-ETTEEEECSEEEECGGGC-
T ss_pred HHHHhcCC--CcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEe--CCEEEEEE-ECCeEEECCEEEECCCCC-
Confidence 87777774 3478999999999999999999999999999999999887 67777787 588999999999875432
Q ss_pred CCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC--CCceEEEeCCCCCCCCCCceEEEEEeCCCCccCCCCc
Q 009226 339 PGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD--LSNFLVIFPPRSLFPEQVTSIRVLQLGGNLAVCPLGM 416 (539)
Q Consensus 339 ~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~--~~~~~~~~p~~~~~~~~~~~v~v~~~ss~~~~cP~G~ 416 (539)
+.. ++ . .....++++++++++... +....+.+|...++ .++.+|+.+.+.+++.||+|+
T Consensus 290 ~~~-------~~----~------~~~~~~~~~il~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~v~~~s~d~~~aP~G~ 350 (433)
T 1d5t_A 290 PDR-------VR----K------AGQVIRIICILSHPIKNTNDANSCQIIIPQNQVN--RKSDIYVCMISYAHNVAAQGK 350 (433)
T ss_dssp GGG-------EE----E------EEEEEEEEEEESSCCTTSTTCSSEEEEECGGGTT--CSSCEEEEEEEGGGTSSCTTC
T ss_pred ccc-------cc----c------cCcceeEEEEEcCcccccCCCceEEEEeCccccC--CCCCEEEEEECCCCcccCCCC
Confidence 111 00 0 124667888889887532 24567788865544 357899999997778999999
Q ss_pred EEEEEEEeeccccchHHHHHHHHHHHH
Q 009226 417 FVLYFSALCDEVNQGKKLLHAALSALQ 443 (539)
Q Consensus 417 ~vi~~st~~~~~~~~~~~l~~~~~~l~ 443 (539)
++++++++++. .++++.|++++++|.
T Consensus 351 ~~~~~~~~~p~-~~~~~~l~~~~~~l~ 376 (433)
T 1d5t_A 351 YIAIASTTVET-TDPEKEVEPALGLLE 376 (433)
T ss_dssp EEEEEEEECCS-SCHHHHTHHHHTTTC
T ss_pred EEEEEEEecCC-CCHHHHHHHHHHHhh
Confidence 99999998875 467788999988865
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.97 E-value=8.2e-30 Score=275.35 Aligned_cols=344 Identities=15% Similarity=0.122 Sum_probs=203.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
.+|||||||++||+||++|+++|++|+|||+++++||+++|++.+|
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G---------------------------------- 47 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQG---------------------------------- 47 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETT----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCC----------------------------------
Confidence 5799999999999999999999999999999999999999986543
Q ss_pred CCCCCeEEecCCCEEEecChHHHHHHhcCC--ccccccccccccee-eEccCCceeecCCCHHHHHhc-cCCChhhHHHH
Q 009226 103 QHPRNFNLDVSGPRVLFCADHAVDLMLKSG--ASHYLEFKSIDATF-MLDADAKLCSVPDSRAAIFKD-KSLGLMEKNQL 178 (539)
Q Consensus 103 ~~~~~f~ldl~Gp~ll~~~~~lv~~L~~s~--~~~y~ef~~v~~~~-~~~~~g~l~~vP~s~~~vf~~-~~ls~~ek~~l 178 (539)
|.+|. ||+++...+.+.+++...+ +.+++++..+++.+ +...+|+...++.+....... ..+++.+...+
T Consensus 48 -----~~~D~-G~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~ 121 (501)
T 4dgk_A 48 -----FTFDA-GPTVITDPSAIEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGY 121 (501)
T ss_dssp -----EEEEC-SCCCBSCTHHHHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHH
T ss_pred -----EEEec-CceeecCchhHHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchh
Confidence 55677 5877766665556655544 56778888887766 334578888888876543321 23456777788
Q ss_pred HHHHHHHHhhcccCcc-c-----ccccc---cccc----ccCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCcchhhhh
Q 009226 179 MRFFKLVQGHLSLDES-E-----ENNVR---ISEE----DLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYV 244 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~-~-----~~~~~---~~~~----~~~~~~~efL~~~~l~~~l~~~l~~-~i~l~~~~~~~~~~~ 244 (539)
.+|++.++........ . ....+ .... ....++.+++.++..++.++.++.+ +......+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~----- 196 (501)
T 4dgk_A 122 RQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFA----- 196 (501)
T ss_dssp HHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC-------
T ss_pred hhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcch-----
Confidence 8888776554321100 0 00000 0001 0113677888888888888887653 2222111111
Q ss_pred ccchhHHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcE
Q 009226 245 LKTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD 324 (539)
Q Consensus 245 ~s~~~~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~ 324 (539)
.+.... +..++ ....| ..||+||+++|+++|++.++..||+|++|++|++|.++ ++++++|++++|++
T Consensus 197 ~~~~~~---~~~~~--~~~~G-----~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~--~~~~~gV~~~~g~~ 264 (501)
T 4dgk_A 197 TSSIYT---LIHAL--EREWG-----VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETT--GNKIEAVHLEDGRR 264 (501)
T ss_dssp CCCTHH---HHHHH--HSCCC-----EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCE
T ss_pred hhhhhh---hhhhh--hccCC-----eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEee--CCeEEEEEecCCcE
Confidence 122211 11111 11122 56999999999999999999999999999999999998 88999999999999
Q ss_pred EEcCEEEEC--CCCCCCCCCcccchhhhhhh-hhcccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCC--C-------
Q 009226 325 ILSHKLVLD--PSFTVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRS--L------- 392 (539)
Q Consensus 325 i~Ad~VI~~--p~~~~~~l~~~~~~~l~~~~-~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~~~~p~~~--~------- 392 (539)
+.||.||++ |..++..|+ +.. +.+... +.+.............+-++.+......+ .+.+.+.. .
T Consensus 265 ~~ad~VV~~a~~~~~~~~Ll-~~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~-~i~~~~~~~~~~~~~~~~ 341 (501)
T 4dgk_A 265 FLTQAVASNADVVHTYRDLL-SQH-PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHH-TVCFGPRYRELIDEIFNH 341 (501)
T ss_dssp EECSCEEECCC-----------------------------CCEEEEEEEEESSCCTTSCSE-EEEEECC-----------
T ss_pred EEcCEEEECCCHHHHHHHhc-ccc-ccchhhhhhhhccccCCceeEEEecccCCccccccc-eeccccchhhhccccccc
Confidence 999999975 444444443 211 122111 11111111122233333356655433322 23332210 0
Q ss_pred -CCCCCceEEEEEeCCC-CccCCCCcEEEEEEEeec
Q 009226 393 -FPEQVTSIRVLQLGGN-LAVCPLGMFVLYFSALCD 426 (539)
Q Consensus 393 -~~~~~~~v~v~~~ss~-~~~cP~G~~vi~~st~~~ 426 (539)
.-...+.+|+...+.. ...+|+|+.++++.+.++
T Consensus 342 ~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p 377 (501)
T 4dgk_A 342 DGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVP 377 (501)
T ss_dssp --CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEEC
T ss_pred cccccCCceecccCCCCCCCcCCCCCceEEEEEecC
Confidence 0012456888777654 488999999999888765
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.91 E-value=6.7e-23 Score=216.45 Aligned_cols=332 Identities=13% Similarity=0.122 Sum_probs=195.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||+.|+++|++|+||||++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g---------------------------------- 46 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKG---------------------------------- 46 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCC----------------------------------
Confidence 4899999999999999999999999999999999999999976543
Q ss_pred CCCCCeEEecCCCEEEec---ChHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHHH
Q 009226 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (539)
Q Consensus 103 ~~~~~f~ldl~Gp~ll~~---~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l~ 179 (539)
|.+|. ||+.+.. ...+.+++.+.+.. .++...++...+..+|+..++|... ..+++.++..+.
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~ 112 (421)
T 3nrn_A 47 -----FQLST-GALHMIPHGEDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKAL 112 (421)
T ss_dssp -----EEEES-SSCSEETTTTSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGGG------GGCC--------
T ss_pred -----EEEec-CCeEEEccCCChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHH
Confidence 44565 4654432 23566666666653 3333333322222277777776532 235566666666
Q ss_pred HHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCC-ChhHHHHHHH-HHhcccCCcchhhhhccchhHHHHHHHH
Q 009226 180 RFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKL-PHKIKSIVLY-AIAMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 180 kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l-~~~l~~~l~~-~i~l~~~~~~~~~~~~s~~~~l~~i~~~ 257 (539)
+++....... .+..+.++.+|++++++ ++.++.++.. .......+. ..++....+..+..+
T Consensus 113 ~~~~~~~~~~-------------~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 113 KLLAEIRMNK-------------LPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL----SDLTALELAKEIRAA 175 (421)
T ss_dssp CCHHHHHTTC-------------CCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCG----GGSBHHHHHHHHHHH
T ss_pred HHHHHHHhcc-------------CCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCc----ccCCHHHHHHHHHHH
Confidence 5554333210 01234789999998744 4455554432 111111111 235555555544433
Q ss_pred HHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCC
Q 009226 258 NSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSF 336 (539)
Q Consensus 258 l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~ 336 (539)
. .++ + +.+|++|+++|+++|++.++..|++|++|++|++|..+ ++++ | +++|++++||.||++ +..
T Consensus 176 ~----~~~---g-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~v--V-~~~g~~~~ad~Vv~a~~~~ 242 (421)
T 3nrn_A 176 L----RWG---G-PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIE--EKKV--Y-TRDNEEYSFDVAISNVGVR 242 (421)
T ss_dssp H----HHC---S-CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETT--TTEE--E-ETTCCEEECSEEEECSCHH
T ss_pred h----hcC---C-cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEE--CCEE--E-EeCCcEEEeCEEEECCCHH
Confidence 2 223 2 46999999999999999999999999999999999865 5654 6 468899999999975 322
Q ss_pred CCCCCCcccchhhhhhh-hhcccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEeCC-CCccCCC
Q 009226 337 TVPGSLASSHQQLQESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGG-NLAVCPL 414 (539)
Q Consensus 337 ~~~~l~~~~~~~l~~~~-~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~ss-~~~~cP~ 414 (539)
...+++ + .+.+|..+ +.+. +..........+.++++.. ....+ .+++... .-.+...+. +...+|+
T Consensus 243 ~~~~ll-~-~~~~~~~~~~~~~-~~~~~~~~~v~l~~~~~~~--~~~~~-~~~~~~~------~~~i~~~s~~~p~~ap~ 310 (421)
T 3nrn_A 243 ETVKLI-G-RDYFDRDYLKQVD-SIEPSEGIKFNLAVPGEPR--IGNTI-VFTPGLM------INGFNEPSALDKSLARE 310 (421)
T ss_dssp HHHHHH-C-GGGSCHHHHHHHH-TCCCCCEEEEEEEEESSCS--SCSSE-EECTTSS------SCEEECGGGTCGGGSCT
T ss_pred HHHHhc-C-cccCCHHHHHHHh-CCCCCceEEEEEEEcCCcc--cCCeE-EEcCCcc------eeeEeccCCCCCCcCCC
Confidence 222332 1 11222221 1111 1122234444455676632 22223 3443221 112333333 3478999
Q ss_pred CcEEEEEEEeeccccchHHHHHHHHHHHHhh
Q 009226 415 GMFVLYFSALCDEVNQGKKLLHAALSALQKL 445 (539)
Q Consensus 415 G~~vi~~st~~~~~~~~~~~l~~~~~~l~~~ 445 (539)
|+.+++++...... +.++.++.+++.|-..
T Consensus 311 G~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~ 340 (421)
T 3nrn_A 311 GYTLIMAHMALKNG-NVKKAIEKGWEELLEI 340 (421)
T ss_dssp TEEEEEEEEECTTC-CHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeeccc-cHHHHHHHHHHHHHHH
Confidence 99999998876543 3345566777766654
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.91 E-value=2.2e-22 Score=212.24 Aligned_cols=335 Identities=13% Similarity=0.093 Sum_probs=193.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||+.|+++|++|+|||+++++||+++++..++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G---------------------------------- 46 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKG---------------------------------- 46 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETT----------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCC----------------------------------
Confidence 5999999999999999999999999999999999999999986654
Q ss_pred CCCCCeEEecCCCEEEec---ChHHHHHHhcCCcccccccccccceeeEc-c--------CCceeecCCCHHHHHhccCC
Q 009226 103 QHPRNFNLDVSGPRVLFC---ADHAVDLMLKSGASHYLEFKSIDATFMLD-A--------DAKLCSVPDSRAAIFKDKSL 170 (539)
Q Consensus 103 ~~~~~f~ldl~Gp~ll~~---~~~lv~~L~~s~~~~y~ef~~v~~~~~~~-~--------~g~l~~vP~s~~~vf~~~~l 170 (539)
|.+|. ||..+.. ...+.+++.+.|....+.... .....+. . +++.+.++.. ...+
T Consensus 47 -----~~~d~-G~~~~~~~~~~~~~~~l~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 113 (425)
T 3ka7_A 47 -----FQLSS-GAFHMLPNGPGGPLACFLKEVEASVNIVRSE-MTTVRVPLKKGNPDYVKGFKDISFNDF------PSLL 113 (425)
T ss_dssp -----EEEES-SSCSCBTTGGGSHHHHHHHHTTCCCCEEECC-CCEEEEESSTTCCSSTTCEEEEEGGGG------GGGS
T ss_pred -----cEEcC-CCceEecCCCccHHHHHHHHhCCCceEEecC-CceEEeecCCCcccccccccceehhhh------hhhC
Confidence 23333 2332221 124555566666533221111 1111110 0 1333333321 1245
Q ss_pred ChhhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCcchhhhhccchh
Q 009226 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVLKTRD 249 (539)
Q Consensus 171 s~~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~-~i~l~~~~~~~~~~~~s~~~ 249 (539)
++.++..+.+.+..... ....+.++.+|++++.-++.++.++.. .......+. ..+++..
T Consensus 114 ~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~ 174 (425)
T 3ka7_A 114 SYKDRMKIALLIVSTRK---------------NRPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKS----DEVPVEE 174 (425)
T ss_dssp CHHHHHHHHHHHHHTTT---------------SCCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCG----GGSBHHH
T ss_pred CHHHHHHHHHHHHhhhh---------------cCCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCc----ccchHHH
Confidence 56666655544332110 012357899999987666666665432 111111121 2355554
Q ss_pred HHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCE
Q 009226 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (539)
Q Consensus 250 ~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~ 329 (539)
.+..+..+ ..++ + ..+|++|++.|+++|.+.++..|++|+++++|++|..+ ++++++|++ +|++++||.
T Consensus 175 ~~~~~~~~----~~~~---~-~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~~~gv~~-~g~~~~ad~ 243 (425)
T 3ka7_A 175 VFEIIENM----YRFG---G-TGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIE--NGKAAGIIA-DDRIHDADL 243 (425)
T ss_dssp HHHHHHHH----HHHC---S-CEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEE-TTEEEECSE
T ss_pred HHHHHHHH----HhcC---C-ccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEE--CCEEEEEEE-CCEEEECCE
Confidence 44444332 1223 2 46999999999999999999999999999999999987 778878886 588999999
Q ss_pred EEEC-CCCCCCCCCcccchhh--hhhh-hhcccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEe
Q 009226 330 LVLD-PSFTVPGSLASSHQQL--QESF-QAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQL 405 (539)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l--~~~~-~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~ 405 (539)
||++ |.+....++.. .+.+ +..+ +.+ ++.......+..+.+++++.. ...+.+++.. .....+...
T Consensus 244 VV~a~~~~~~~~ll~~-~~~~~~~~~~~~~~-~~~~~~~~~~v~l~~~~~~~~---~~~~~~~~~~-----~~~~~~~~~ 313 (425)
T 3ka7_A 244 VISNLGHAATAVLCSE-ALSKEADAAYFKMV-GTLQPSAGIKICLAADEPLVG---HTGVLLTPYT-----RRINGVNEV 313 (425)
T ss_dssp EEECSCHHHHHHHTTT-TCCTTTTHHHHHHH-HHCCCBEEEEEEEEESSCSSC---SSSEEECCSS-----SSEEEEECG
T ss_pred EEECCCHHHHHHhcCC-cccccCCHHHHHHh-hCcCCCceEEEEeecCCCccC---cCEEEECCCh-----hhcceEEec
Confidence 9975 33322233211 1111 2211 122 111233344555567777532 2333444421 122334444
Q ss_pred CC-CCccCCCCcEEEEEEEeeccc--cchHHHHHHHHHHHHh
Q 009226 406 GG-NLAVCPLGMFVLYFSALCDEV--NQGKKLLHAALSALQK 444 (539)
Q Consensus 406 ss-~~~~cP~G~~vi~~st~~~~~--~~~~~~l~~~~~~l~~ 444 (539)
|. ++..+|+|+.++++....... +..++.++.+++.|-.
T Consensus 314 s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 355 (425)
T 3ka7_A 314 TQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKE 355 (425)
T ss_dssp GGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHH
T ss_pred cCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHH
Confidence 43 357899999999887654321 1123555666555554
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.90 E-value=2.9e-22 Score=214.89 Aligned_cols=349 Identities=15% Similarity=0.143 Sum_probs=202.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (539)
.+||||||||++||+||..|+++|++|+|||+++++||+++|+..++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g--------------------------------- 62 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAG--------------------------------- 62 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETT---------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCC---------------------------------
Confidence 57999999999999999999999999999999999999999976533
Q ss_pred cCCCCCeEEecCCCEEEec-ChHHHHHHhcCCccccccccc--ccceeeEccCCceeecCCCHHHHHhccCCChhhHHHH
Q 009226 102 SQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS--IDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 102 ~~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~--v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l 178 (539)
+.+|. |++++.. ...+.+++.+.|+...+.+.. ....+++. +|+.+++|.+..+++....++..++..+
T Consensus 63 ------~~~~~-g~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 134 (478)
T 2ivd_A 63 ------YLVEQ-GPNSFLDREPATRALAAALNLEGRIRAADPAAKRRYVYT-RGRLRSVPASPPAFLASDILPLGARLRV 134 (478)
T ss_dssp ------EEEES-SCCCEETTCHHHHHHHHHTTCGGGEECSCSSCCCEEEEE-TTEEEECCCSHHHHHTCSSSCHHHHHHH
T ss_pred ------eeeec-ChhhhhhhhHHHHHHHHHcCCcceeeecCccccceEEEE-CCEEEECCCCHHHhccCCCCCHHHHHHH
Confidence 44566 4777655 346778888888866554332 11233443 7888899988777766555554433221
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHH-hcccCCcchhhhhccchhHHHHHHHH
Q 009226 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i-~l~~~~~~~~~~~~s~~~~l~~i~~~ 257 (539)
+...... . .....+.++.+|+++..-++.++.++.... ... ..++ .++++...+..+..+
T Consensus 135 ------~~~~~~~-~--------~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~s~~~~~~~~~~~ 195 (478)
T 2ivd_A 135 ------AGELFSR-R--------APEGVDESLAAFGRRHLGHRATQVLLDAVQTGIY--AGDV--EQLSVAATFPMLVKM 195 (478)
T ss_dssp ------HGGGGCC-C--------CCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHH--CCCT--TTBBHHHHCHHHHHH
T ss_pred ------hhhhhcC-C--------CCCCCCCCHHHHHHHhhCHHHHHHHHHHHhceee--cCCH--HHhhHHHHhHHHHHH
Confidence 2222110 0 012456899999997433333333332111 111 1111 235555544444333
Q ss_pred HHhhhh-------c----------cCCC----ccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEE
Q 009226 258 NSSIGR-------F----------QNAL----GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKG 316 (539)
Q Consensus 258 l~s~g~-------~----------g~~~----ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~g 316 (539)
....+. . .... +.+.+|++|++.|+++|++.+ |++|+++++|++|..+ +++ ++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~--~~~-~~ 269 (478)
T 2ivd_A 196 EREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE--DGG-WR 269 (478)
T ss_dssp HHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC----C-CE
T ss_pred HHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec--CCe-EE
Confidence 221110 0 0000 236799999999999988754 7899999999999875 444 57
Q ss_pred EEe---CCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCC
Q 009226 317 VRL---ASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSL 392 (539)
Q Consensus 317 V~l---~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~~~~p~~~~ 392 (539)
|++ .+|++++||+||++ |...+..++ ++++..+...........+.+..+.+++++.+.+....+.+|...
T Consensus 270 v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll----~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~- 344 (478)
T 2ivd_A 270 LIIEEHGRRAELSVAQVVLAAPAHATAKLL----RPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEE- 344 (478)
T ss_dssp EEEEETTEEEEEECSEEEECSCHHHHHHHH----TTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGG-
T ss_pred EEEeecCCCceEEcCEEEECCCHHHHHHHh----hccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCC-
Confidence 777 68889999999975 333222221 223333222223334556777778888885433223334455321
Q ss_pred CCCCCceEEEEEeCC-CCccCCCCcEEEEEEEeeccc-----cchHHHHHHHHHHHHh
Q 009226 393 FPEQVTSIRVLQLGG-NLAVCPLGMFVLYFSALCDEV-----NQGKKLLHAALSALQK 444 (539)
Q Consensus 393 ~~~~~~~v~v~~~ss-~~~~cP~G~~vi~~st~~~~~-----~~~~~~l~~~~~~l~~ 444 (539)
......+...++ ....+|+|..++.+....... ...++..+.+++.|..
T Consensus 345 ---~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 399 (478)
T 2ivd_A 345 ---QRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKA 399 (478)
T ss_dssp ---CCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHH
T ss_pred ---CCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHH
Confidence 011222333222 235678887766554433221 1223444555555544
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.89 E-value=1.1e-21 Score=212.95 Aligned_cols=295 Identities=14% Similarity=0.081 Sum_probs=184.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||||++||+||..|+++|++|+|||+++++||++.|+..+
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~--------------------------------- 49 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ--------------------------------- 49 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT---------------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC---------------------------------
Confidence 45899999999999999999999999999999999999999997653
Q ss_pred ccCCCCCeEEecCCCEEEec-ChHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHHH
Q 009226 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLM 179 (539)
Q Consensus 101 ~~~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l~ 179 (539)
..+.+|+ |++++.. ...+.+++.+.|+..+..+..-.. +.+ .+|+...++... . ..+++.+...+.
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~-~~~-~~g~~~~~~~~~----p-~~~~~~~~~~~~ 116 (520)
T 1s3e_A 50 -----KVKYVDL-GGSYVGPTQNRILRLAKELGLETYKVNEVERL-IHH-VKGKSYPFRGPF----P-PVWNPITYLDHN 116 (520)
T ss_dssp -----TTSCEES-SCCEECTTCHHHHHHHHHTTCCEEECCCSSEE-EEE-ETTEEEEECSSS----C-CCCSHHHHHHHH
T ss_pred -----CCccccc-CceEecCCcHHHHHHHHHcCCcceecccCCce-EEE-ECCEEEEecCCC----C-CCCCHHHHHHHH
Confidence 1233566 4776654 346777888888765543332211 222 366666554320 0 012333444444
Q ss_pred HHHHHHHhhcccCccccc-cccccccccCCcHHHHHHhcCCChhHHHHHHHHH-hcccCCcchhhhhccchhHHHHHHHH
Q 009226 180 RFFKLVQGHLSLDESEEN-NVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAI-AMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 180 kfl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i-~l~~~~~~~~~~~~s~~~~l~~i~~~ 257 (539)
+++..+.+.......... ......++.+.++.+|+++...++.++.++.... ... ..++ .++++...+. +
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--g~~~--~~~s~~~~~~----~ 188 (520)
T 1s3e_A 117 NFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCV--TAET--HEVSALWFLW----Y 188 (520)
T ss_dssp HHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHH--SSCT--TTSBHHHHHH----H
T ss_pred HHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhc--CCCh--HHhHHHHHHH----H
Confidence 444433332211100000 0001123567899999999888888877664321 111 1121 2345544432 2
Q ss_pred HHhhhh----ccC-CCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 258 NSSIGR----FQN-ALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 258 l~s~g~----~g~-~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
+...+. +.. ..+.+.++.+|+++|+++|++. .|++|++|++|++|..+ ++++ .|++.+|+++.||+||+
T Consensus 189 ~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~v-~v~~~~g~~~~ad~VI~ 262 (520)
T 1s3e_A 189 VKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDL---LGDRVKLERPVIYIDQT--RENV-LVETLNHEMYEAKYVIS 262 (520)
T ss_dssp HHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHH---HGGGEESSCCEEEEECS--SSSE-EEEETTSCEEEESEEEE
T ss_pred HhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHH---cCCcEEcCCeeEEEEEC--CCeE-EEEECCCeEEEeCEEEE
Confidence 222111 110 1122568999999999988764 48899999999999875 4554 48888999999999997
Q ss_pred C-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCC
Q 009226 333 D-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (539)
Q Consensus 333 ~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~ 377 (539)
+ |...+..+ .++|++|..+....++..++.+.+..+.+++++-
T Consensus 263 a~p~~~l~~l--~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (520)
T 1s3e_A 263 AIPPTLGMKI--HFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFW 306 (520)
T ss_dssp CSCGGGGGGS--EEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGG
T ss_pred CCCHHHHcce--eeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcc
Confidence 5 44333343 2456677666554455667788888888998863
No 10
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.87 E-value=6e-21 Score=203.23 Aligned_cols=292 Identities=11% Similarity=0.104 Sum_probs=173.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
+.++||||||||++||+||..|+++|++|+|+|+++++||++.++..++
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g------------------------------- 51 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDG------------------------------- 51 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETT-------------------------------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCC-------------------------------
Confidence 3568999999999999999999999999999999999999999876533
Q ss_pred cccCCCCCeEEecCCCEEEec-ChHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHH
Q 009226 100 LLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 100 ~~~~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l 178 (539)
+.+|+ |++++.. ...+.+++.+.|+..+..+......+. ..+|+...++... ..+++.....+
T Consensus 52 --------~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~~~~~~~------~~~~~~~~~~~ 115 (453)
T 2yg5_A 52 --------AVLEI-GGQWVSPDQTALISLLDELGLKTFERYREGESVYI-SSAGERTRYTGDS------FPTNETTKKEM 115 (453)
T ss_dssp --------EEEEC-SCCCBCTTCHHHHHHHHHTTCCEEECCCCSEEEEE-CTTSCEEEECSSS------CSCCHHHHHHH
T ss_pred --------ceecc-CCeEecCccHHHHHHHHHcCCcccccccCCCEEEE-eCCCceeeccCCC------CCCChhhHHHH
Confidence 23344 3444332 346677777788766554433222222 2125544443210 01222222222
Q ss_pred HHHHHHHHhh----cccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCcchhhh-hccchhHHHH
Q 009226 179 MRFFKLVQGH----LSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEY-VLKTRDGINR 253 (539)
Q Consensus 179 ~kfl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~-~~s~~~~l~~ 253 (539)
.+++..+... ....+.. .....++.+.++.+||++++.++.++.++...+ ...+..++ . ++++...+..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~s~~~~~~~ 189 (453)
T 2yg5_A 116 DRLIDEMDDLAAQIGAEEPWA---HPLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKP--AHSFSALQAVLM 189 (453)
T ss_dssp HHHHHHHHHHHHHHCSSCGGG---STTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSC--TTSSBHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCC---CcchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCC--cccccHHHHHHH
Confidence 2322222111 1000000 001123457899999999888888888665332 11222222 2 3555544332
Q ss_pred HHHHHHhhhhc----cCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCE
Q 009226 254 LALYNSSIGRF----QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHK 329 (539)
Q Consensus 254 i~~~l~s~g~~----g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~ 329 (539)
+ ...+.+ ....+.+.++++|++.|+++|++. .|++|++|++|++|..+ +++.+.|++ +|+++.||+
T Consensus 190 ~----~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~---lg~~i~~~~~V~~i~~~--~~~~v~v~~-~~~~~~ad~ 259 (453)
T 2yg5_A 190 A----ASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEA---LGDDVFLNAPVRTVKWN--ESGATVLAD-GDIRVEASR 259 (453)
T ss_dssp H----HHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHH---HGGGEECSCCEEEEEEE--TTEEEEEET-TTEEEEEEE
T ss_pred h----ccCCcHhhhccCCCcceEEEcCChHHHHHHHHHh---cCCcEEcCCceEEEEEe--CCceEEEEE-CCeEEEcCE
Confidence 2 221111 000012468999999999988764 48999999999999876 554245764 788999999
Q ss_pred EEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009226 330 LVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 330 VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l 376 (539)
||++ |...+..+. +++++|..+....++...+.+.+..+.+++++
T Consensus 260 VI~a~p~~~~~~l~--~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 260 VILAVPPNLYSRIS--YDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp EEECSCGGGGGGSE--EESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred EEEcCCHHHHhcCE--eCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 9975 444434432 44566665443333344566777777788885
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.87 E-value=3.7e-21 Score=205.15 Aligned_cols=348 Identities=13% Similarity=0.140 Sum_probs=190.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCC------CeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISN 95 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G------~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (539)
.+||||||||++||+||.+|+++| ++|+|||+++++||++.|...++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g--------------------------- 57 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDG--------------------------- 57 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTT---------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCC---------------------------
Confidence 489999999999999999999999 99999999999999999975532
Q ss_pred cccccccCCCCCeEEecCCCEEEec-ChHHHHHHhcCCcccccccccccceeeEccCCceeecCCCH--------HHHHh
Q 009226 96 YASRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSR--------AAIFK 166 (539)
Q Consensus 96 ~~~~~~~~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~--------~~vf~ 166 (539)
+.+|. |++.+.. ...+.+++.+.|+...+........+++. +|++..+|... ..+++
T Consensus 58 ------------~~~d~-G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~p~~~~~~~~ 123 (470)
T 3i6d_A 58 ------------YIIER-GPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLV-NRTLHPMPKGAVMGIPTKIAPFVS 123 (470)
T ss_dssp ------------CCEES-SCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEEC-SSCEEECCC---------------
T ss_pred ------------EEecc-ChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEE-CCEEEECCCCcccCCcCchHHhhc
Confidence 33455 4654433 33577788888887655432233344443 67777776532 11222
Q ss_pred ccCCChhhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHH-HHhcccCCcchhhhhc
Q 009226 167 DKSLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLY-AIAMADYDQEVSEYVL 245 (539)
Q Consensus 167 ~~~ls~~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~-~i~l~~~~~~~~~~~~ 245 (539)
...++..++... ...... . ......+.++.+|+++..-.+....++.. ..+. +..+. .++
T Consensus 124 ~~~~~~~~~~~~--~~~~~~---~----------~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~ 184 (470)
T 3i6d_A 124 TGLFSLSGKARA--AMDFIL---P----------ASKTKDDQSLGEFFRRRVGDEVVENLIEPLLSGI--YAGDI--DKL 184 (470)
T ss_dssp ------CCSHHH--HHHHHS---C----------CCSSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHT--TCSCT--TTB
T ss_pred cCcCCHHHHHHH--hcCccc---C----------CCCCCCCcCHHHHHHHhcCHHHHHHhccchhcEE--ecCCH--HHh
Confidence 222222222111 001000 0 01234568999999874333333333221 1122 22222 224
Q ss_pred cchhHHHHHHHHHHhhhhcc-----------------CCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEe
Q 009226 246 KTRDGINRLALYNSSIGRFQ-----------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (539)
Q Consensus 246 s~~~~l~~i~~~l~s~g~~g-----------------~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~ 308 (539)
++...+..+..+....+... ...+.+.++++|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 185 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 262 (470)
T 3i6d_A 185 SLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS 262 (470)
T ss_dssp BHHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc
Confidence 44333322211111110000 00124778999999999988764432 799999999999876
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCC-CceEEE
Q 009226 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDL-SNFLVI 386 (539)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~~-~~~~~~ 386 (539)
+++ +.|++++|+++.||+||+. |...+..++ .++++....+ +.....+.+..+.+++++-+.+ ....++
T Consensus 263 --~~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l~--~~~~~~~~~~----~~~~~~~~~v~l~~~~~~~~~~~~~~g~l 333 (470)
T 3i6d_A 263 --GSC-YSLELDNGVTLDADSVIVTAPHKAAAGML--SELPAISHLK----NMHSTSVANVALGFPEGSVQMEHEGTGFV 333 (470)
T ss_dssp --SSS-EEEEESSSCEEEESEEEECSCHHHHHHHT--TTSTTHHHHH----TCEEEEEEEEEEEESSTTCCCSSCSSEEE
T ss_pred --CCe-EEEEECCCCEEECCEEEECCCHHHHHHHc--CCchhhHHHh----cCCCCceEEEEEEECchhcCCCCCCeEEE
Confidence 444 5788889989999999975 433322222 1222222222 2345667777777898864332 334455
Q ss_pred eCCCCCCCCCCceEEEEEeCC--CCccCCCCcEEEEEEEeecc-----ccchHHHHHHHHHHHHhh
Q 009226 387 FPPRSLFPEQVTSIRVLQLGG--NLAVCPLGMFVLYFSALCDE-----VNQGKKLLHAALSALQKL 445 (539)
Q Consensus 387 ~p~~~~~~~~~~~v~v~~~ss--~~~~cP~G~~vi~~st~~~~-----~~~~~~~l~~~~~~l~~~ 445 (539)
+|... ...+......+ ....+|.|..++.+...... ..+.++.++.+++.|-..
T Consensus 334 ~~~~~-----~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (470)
T 3i6d_A 334 ISRNS-----DFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKV 394 (470)
T ss_dssp ECSTT-----CCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGG
T ss_pred ccCCC-----CCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHH
Confidence 55432 12233333332 23567888877766542221 113345555565555543
No 12
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.86 E-value=2.2e-20 Score=200.23 Aligned_cols=328 Identities=15% Similarity=0.164 Sum_probs=190.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G--~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (539)
|..+||+|||||++||++|..|+++| ++|+|||+++++||++++....+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g----------------------------- 52 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDG----------------------------- 52 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTT-----------------------------
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCC-----------------------------
Confidence 45689999999999999999999999 99999999999999999976533
Q ss_pred cccccCCCCCeEEecCCCEEEec-ChHHHHHHhcCCcccccccccccceeeEccCCceeecCCC--------HHHHHhcc
Q 009226 98 SRLLSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDS--------RAAIFKDK 168 (539)
Q Consensus 98 ~~~~~~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s--------~~~vf~~~ 168 (539)
+.+|. |++.+.. ...+.+++.+.|+............+++. +|++.++|.. ...+++..
T Consensus 53 ----------~~~~~-g~~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~p~~~~~~~~~~ 120 (475)
T 3lov_A 53 ----------FTIER-GPDSYVARKHILTDLIEAIGLGEKLVRNNTSQAFILD-TGGLHPIPKGAVMGIPTDLDLFRQTT 120 (475)
T ss_dssp ----------CCEES-SCCCEETTSTHHHHHHHHTTCGGGEEECCCCCEEEEE-TTEEEECCSSEETTEESCHHHHTTCS
T ss_pred ----------EEEec-CchhhhcccHHHHHHHHHcCCcceEeecCCCceEEEE-CCEEEECCCcccccCcCchHHHhhcc
Confidence 23355 3554433 34677888888887654433233344443 7777777653 34555666
Q ss_pred CCChhhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCcchhhhhccch
Q 009226 169 SLGLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTR 248 (539)
Q Consensus 169 ~ls~~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~ 248 (539)
.++..+|..+..++ ..... .......+.++.+|+++..-.+....++. .+....+..+. .++++.
T Consensus 121 ~~~~~~~~~~~~~~---~~~~~---------~~~~~~~~~s~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~--~~ls~~ 185 (475)
T 3lov_A 121 LLTEEEKQEVADLL---LHPSD---------SLRIPEQDIPLGEYLRPRLGDALVEKLIE-PLLSGIYAGNI--DQMSTF 185 (475)
T ss_dssp SSCHHHHHHHHHHH---HSCCT---------TCCCCSSCCBHHHHHHHHHCHHHHHHTHH-HHHHGGGCCCT--TTSBST
T ss_pred CCChhHHHHhhCcc---cCCcc---------cccCCCCCcCHHHHHHHHhCHHHHHHHHH-HHhceeecCCh--HHcCHH
Confidence 66666555222221 11100 00113456899999986322223333322 11111122222 235555
Q ss_pred hHHHHHHHHHHhhhhc-------c-------------CCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEe
Q 009226 249 DGINRLALYNSSIGRF-------Q-------------NALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTD 308 (539)
Q Consensus 249 ~~l~~i~~~l~s~g~~-------g-------------~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~ 308 (539)
..+..+..+....+.+ . ...+.+.++++|++.|+++|++.+.. ++|+++++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 263 (475)
T 3lov_A 186 ATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE 263 (475)
T ss_dssp TTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE
T ss_pred HHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe
Confidence 4444444332222110 0 00134789999999999988765432 799999999999876
Q ss_pred cCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEe
Q 009226 309 QNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIF 387 (539)
Q Consensus 309 ~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~~~~ 387 (539)
+++ +.|++.+| ++.||+||+. |.+.+..++ .++++ +.. ....+..+.+..+.+++++........+++
T Consensus 264 --~~~-~~v~~~~g-~~~ad~vV~a~p~~~~~~ll--~~~~~-~~~----~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~ 332 (475)
T 3lov_A 264 --DGR-YRLKTDHG-PEYADYVLLTIPHPQVVQLL--PDAHL-PEL----EQLTTHSTATVTMIFDQQQSLPIEGTGFVV 332 (475)
T ss_dssp --TTE-EEEECTTC-CEEESEEEECSCHHHHHHHC--TTSCC-HHH----HTCCEEEEEEEEEEEECCSSCSSSSSEEEE
T ss_pred --CCE-EEEEECCC-eEECCEEEECCCHHHHHHHc--CccCH-HHH----hcCCCCeEEEEEEEECCcCCCCCCCEEEEe
Confidence 444 56888888 7999999975 433322322 11111 111 223456677777788998722223344555
Q ss_pred CCCCCCCCCCceEEEEEeCCC--CccCCCCcEEEEEE
Q 009226 388 PPRSLFPEQVTSIRVLQLGGN--LAVCPLGMFVLYFS 422 (539)
Q Consensus 388 p~~~~~~~~~~~v~v~~~ss~--~~~cP~G~~vi~~s 422 (539)
|+.. ...+....+.+. ....|. ..++...
T Consensus 333 ~~~~-----~~~~~~~~~~s~~~~~~~p~-~~~l~~~ 363 (475)
T 3lov_A 333 NRRA-----PYSITACTAIDQKWNHSAPD-HTVLRAF 363 (475)
T ss_dssp CTTS-----SCSEEEEEEHHHHCTTTCTT-EEEEEEE
T ss_pred cCCC-----CCceEEEEEEcccCCCCCCC-cEEEEEE
Confidence 5432 223444444332 344565 4444443
No 13
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.86 E-value=8.1e-21 Score=203.43 Aligned_cols=326 Identities=13% Similarity=0.082 Sum_probs=183.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
+||||||||++||+||++|+++|+ +|+|||+++++||++.++...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~--------------------------------- 49 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP--------------------------------- 49 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT---------------------------------
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc---------------------------------
Confidence 699999999999999999999999 999999999999999996542
Q ss_pred ccCCCCCeEEecCCCEEEecC----hHHHHHHhcCCccccccccc-----ccceeeEccCCceeecCCCHHHHHhc-cCC
Q 009226 101 LSQHPRNFNLDVSGPRVLFCA----DHAVDLMLKSGASHYLEFKS-----IDATFMLDADAKLCSVPDSRAAIFKD-KSL 170 (539)
Q Consensus 101 ~~~~~~~f~ldl~Gp~ll~~~----~~lv~~L~~s~~~~y~ef~~-----v~~~~~~~~~g~l~~vP~s~~~vf~~-~~l 170 (539)
..+.+|. ||+.+... ..+.+++.+.|+...+.... ....+++. +|++.++|.+...++.. ..+
T Consensus 50 -----~g~~~d~-G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~-~g~~~~~p~~~~~~~~~~~~~ 122 (477)
T 3nks_A 50 -----NGAIFEL-GPRGIRPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYV-GGALHALPTGLRGLLRPSPPF 122 (477)
T ss_dssp -----TSCEEES-SCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEE-TTEEEECCCSSCC---CCTTS
T ss_pred -----CCeEEEe-CCCcccCCCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEE-CCEEEECCCChhhcccccchh
Confidence 1244566 46665443 24567777777754332211 11234454 78888888764333321 111
Q ss_pred ChhhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH---HHHhcccCCcchhhhhccc
Q 009226 171 GLMEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL---YAIAMADYDQEVSEYVLKT 247 (539)
Q Consensus 171 s~~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~---~~i~l~~~~~~~~~~~~s~ 247 (539)
.. ..+.+.+ ..... + .....+.++.+|+++..-.+....++. .++. ..+. .+++.
T Consensus 123 ~~---~~~~~~~---~~~~~--~--------~~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~--~~ls~ 180 (477)
T 3nks_A 123 SK---PLFWAGL---RELTK--P--------RGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVF----AGNS--RELSI 180 (477)
T ss_dssp CS---CSSHHHH---TTTTS--C--------CCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHHHH----SSCT--TTBBH
T ss_pred hh---HHHHHHH---Hhhhc--C--------CCCCCCcCHHHHHHHhhCHHHHHHHHHHHhcccc----cCCH--HHhhH
Confidence 11 1111111 11110 0 112345789999986222222222221 1221 1121 23555
Q ss_pred hhHHHHHHHHHHhhhh-----c-----------------cCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEE
Q 009226 248 RDGINRLALYNSSIGR-----F-----------------QNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISL 305 (539)
Q Consensus 248 ~~~l~~i~~~l~s~g~-----~-----------------g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I 305 (539)
...+..+..+....+. + ......++++++|++.|+++|++.+...|++|++|++|++|
T Consensus 181 ~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i 260 (477)
T 3nks_A 181 RSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGL 260 (477)
T ss_dssp HHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhcccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEE
Confidence 5554443332211110 0 00011367999999999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceE
Q 009226 306 LTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFL 384 (539)
Q Consensus 306 ~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~ 384 (539)
..+ +++.+.|++ +|+++.||+||++ |.+.+..++.+..+++.+ .+ ....+..+....+.++.++.+.. ..-
T Consensus 261 ~~~--~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~ll~~~~~~~~~---~l-~~~~~~~~~~v~l~~~~~~~~~~-~~g 332 (477)
T 3nks_A 261 SLQ--AEGRWKVSL-RDSSLEADHVISAIPASVLSELLPAEAAPLAR---AL-SAITAVSVAVVNLQYQGAHLPVQ-GFG 332 (477)
T ss_dssp EEC--GGGCEEEEC-SSCEEEESEEEECSCHHHHHHHSCGGGHHHHH---HH-HTCCEEEEEEEEEEETTCCCSSC-SSE
T ss_pred EEc--CCceEEEEE-CCeEEEcCEEEECCCHHHHHHhccccCHHHHH---HH-hcCCCCcEEEEEEEECCCCCCCC-Cce
Confidence 876 444457765 6778999999975 443323332222222222 22 22244556666667888765433 234
Q ss_pred EEeCCCCCCCCCCceEEEEEeCCC--CccC-CCCcEEEEEEE
Q 009226 385 VIFPPRSLFPEQVTSIRVLQLGGN--LAVC-PLGMFVLYFSA 423 (539)
Q Consensus 385 ~~~p~~~~~~~~~~~v~v~~~ss~--~~~c-P~G~~vi~~st 423 (539)
.++|+.. +..+....+.+. .+.. |+|..++.+..
T Consensus 333 ~l~~~~~-----~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~ 369 (477)
T 3nks_A 333 HLVPSSE-----DPGVLGIVYDSVAFPEQDGSPPGLRVTVML 369 (477)
T ss_dssp EECCTTT-----CSSEEEEECHHHHCGGGSTTTTCEEEEEEE
T ss_pred EEccCCC-----CCCceEEEEeccccCCCCCCCCceEEEEEE
Confidence 4555432 122333344332 2222 33777775554
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.86 E-value=1.9e-20 Score=202.21 Aligned_cols=360 Identities=13% Similarity=0.083 Sum_probs=197.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||||++||+||+.|+++|++|+|||+++++||+++|+..++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g-------------------------------- 59 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDG-------------------------------- 59 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETT--------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCC--------------------------------
Confidence 468999999999999999999999999999999999999999976533
Q ss_pred ccCCCCCeEEecCCCEEEec-ChHHHHHHhcCCccccccccccc-ceeeEccCCceeecCCCHHHHHhccCCChhhHHHH
Q 009226 101 LSQHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 101 ~~~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~v~-~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l 178 (539)
+.+|. |++++.. ...+.+++.+.|+.....|.... ..+++ .+|+...+|.+..+++....++..+|..+
T Consensus 60 -------~~~~~-g~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~-~~g~~~~~p~~~~~~~~~~~~~~~~~~~~ 130 (504)
T 1sez_A 60 -------LIWDE-GANTMTESEGDVTFLIDSLGLREKQQFPLSQNKRYIA-RNGTPVLLPSNPIDLIKSNFLSTGSKLQM 130 (504)
T ss_dssp -------EEEES-SCCCBCCCSHHHHHHHHHTTCGGGEECCSSCCCEEEE-SSSSEEECCSSHHHHHHSSSSCHHHHHHH
T ss_pred -------eEEec-CCcccccCcHHHHHHHHHcCCcccceeccCCCceEEE-ECCeEEECCCCHHHHhccccCCHHHHHHH
Confidence 34566 4666543 34677888888887666554322 23344 48888899988777666555655444332
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH-HHHhcccCCcchhhhhccchhHHHHHHHH
Q 009226 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~-~~i~l~~~~~~~~~~~~s~~~~l~~i~~~ 257 (539)
.. ......... . . .....+.++.+|+++..-++.++.++. +..... ..++ .++++...+..+..+
T Consensus 131 ~~--~~~~~~~~~-~-----~--~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~s~~~~~~~~~~~ 196 (504)
T 1sez_A 131 LL--EPILWKNKK-L-----S--QVSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTC--GGDP--DSLSMHHSFPELWNL 196 (504)
T ss_dssp HT--HHHHC------------------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHH--SCCG--GGSBHHHHCHHHHHH
T ss_pred hH--hhhccCccc-c-----c--ccCCCCccHHHHHHHHcCHHHHHHHHHHHHcccc--CCCh--HHhhHHHHhHHHHHH
Confidence 11 111100000 0 0 012345899999986432333333332 111111 1121 234554433322221
Q ss_pred HHh------------hhhccC-------------CCccEEeecCCcChHHHHHHHHHHHCC-cEEEeCCcceEEEEecCC
Q 009226 258 NSS------------IGRFQN-------------ALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNS 311 (539)
Q Consensus 258 l~s------------~g~~g~-------------~~ga~lyp~gG~geL~qal~r~~a~~G-g~i~L~~~V~~I~~~~~~ 311 (539)
... +...+. ....+.+++||+++|+++|++ .+| ++|++|++|++|..+ +
T Consensus 197 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~l~~---~l~~~~i~~~~~V~~I~~~--~ 271 (504)
T 1sez_A 197 EKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGMQTLTDAICK---DLREDELRLNSRVLELSCS--C 271 (504)
T ss_dssp HHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCTHHHHHHHHT---TSCTTTEETTCCEEEEEEE--C
T ss_pred HHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHHHHHHHHHHh---hcccceEEcCCeEEEEEec--C
Confidence 111 001000 001256899999999998875 456 899999999999887 3
Q ss_pred Cc-----EEEEEeC--CC---cEEEcCEEEEC-CCCCCCCCCc-ccchhhhhhhhhcccCCCcceEEEEEEEecCCCCC-
Q 009226 312 GS-----YKGVRLA--SG---QDILSHKLVLD-PSFTVPGSLA-SSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP- 378 (539)
Q Consensus 312 g~-----~~gV~l~--~G---~~i~Ad~VI~~-p~~~~~~l~~-~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~- 378 (539)
++ .+.|++. +| +++.||+||++ |...+..++. +..++++... + .......+.+..+.+++++-+
T Consensus 272 ~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~--l-~~~~~~~~~~v~l~~~~~~~~~ 348 (504)
T 1sez_A 272 TEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNF--I-PEVDYVPLSVVITTFKRENVKY 348 (504)
T ss_dssp SSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTT--S-CCCCEEEEEEEEEEEEGGGBSS
T ss_pred CCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHH--H-hcCCCCceEEEEEEEchhhcCC
Confidence 33 2456554 45 67899999975 3333233321 0001122111 1 222334566666667776422
Q ss_pred CCCceEEEeCCCCCCCCCCceEEEEEeC--CCCccCCCCcEEEEEEEeeccc-----cchHHHHHHHHHHHHhh
Q 009226 379 DLSNFLVIFPPRSLFPEQVTSIRVLQLG--GNLAVCPLGMFVLYFSALCDEV-----NQGKKLLHAALSALQKL 445 (539)
Q Consensus 379 ~~~~~~~~~p~~~~~~~~~~~v~v~~~s--s~~~~cP~G~~vi~~st~~~~~-----~~~~~~l~~~~~~l~~~ 445 (539)
......+.+|+.... ....++...++ ..+..+|+|..++...+..... ...++.++.+++.|-..
T Consensus 349 ~~~~~~~l~~~~~~~--~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~ 420 (504)
T 1sez_A 349 PLEGFGVLVPSKEQQ--HGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQL 420 (504)
T ss_dssp CCCSSEEECCGGGGG--GTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHH
T ss_pred CCCceEEEcCCCCCC--CCCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHH
Confidence 223345566643210 00011111222 2234679898776554432211 12345555555555443
No 15
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.86 E-value=1.1e-21 Score=211.80 Aligned_cols=244 Identities=16% Similarity=0.142 Sum_probs=141.1
Q ss_pred cccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 009226 22 AFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~-G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
.+||||||||++||+||++|+++ |++|+|||+++++||+++|+...
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~--------------------------------- 56 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTP--------------------------------- 56 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECT---------------------------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEec---------------------------------
Confidence 58999999999999999999984 99999999999999999985321
Q ss_pred ccCCCCCeEEecCCCEEEecCh-HHHHHHhcCCcccccccccccce-eeEccCCceeecCCCHHHHHhccCCChhhHHHH
Q 009226 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDAT-FMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 101 ~~~~~~~f~ldl~Gp~ll~~~~-~lv~~L~~s~~~~y~ef~~v~~~-~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l 178 (539)
.+|.+|. ||++++... .+.+++.+.+... .+|...++. +++. +|+++++|... .+ ..+....+...
T Consensus 57 -----~G~~~D~-G~h~~~~~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~-~g~~~~~p~~~-~~---~~~~~~~~~~~ 124 (513)
T 4gde_A 57 -----EGFLYDV-GGHVIFSHYKYFDDCLDEALPKE-DDWYTHQRISYVRC-QGQWVPYPFQN-NI---SMLPKEEQVKC 124 (513)
T ss_dssp -----TSCEEES-SCCCCCCCBHHHHHHHHHHSCSG-GGEEEEECCEEEEE-TTEEEESSGGG-GG---GGSCHHHHHHH
T ss_pred -----CCEEEEe-CceEecCCCHHHHHHHHHhCCcc-ceeEEecCceEEEE-CCeEeecchhh-hh---hhcchhhHHHH
Confidence 2356677 588876665 4555555544321 234333332 3443 78888888531 11 12222222222
Q ss_pred -HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH--HHHhcccCCcchhhhhccchhHH----
Q 009226 179 -MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL--YAIAMADYDQEVSEYVLKTRDGI---- 251 (539)
Q Consensus 179 -~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~--~~i~l~~~~~~~~~~~~s~~~~l---- 251 (539)
..++....... .......++.+|+.+.. .+.+.+.+. +.-.....+. .++++..+.
T Consensus 125 ~~~~~~~~~~~~------------~~~~~~~s~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~~----~~ls~~~~~~~~~ 187 (513)
T 4gde_A 125 IDGMIDAALEAR------------VANTKPKTFDEWIVRMM-GTGIADLFMRPYNFKVWAVPT----TKMQCAWLGERVA 187 (513)
T ss_dssp HHHHHHHHHHHH------------TCCSCCCSHHHHHHHHH-HHHHHHHTHHHHHHHHHSSCG----GGBCSGGGCSSCC
T ss_pred HHHHHHHHHhhh------------cccccccCHHHHHHHhh-hhhhhhhhcchhhhhhccCCh----HHhhHHHHHHhhc
Confidence 12222111110 01223467788776421 122222111 1111111111 112222111
Q ss_pred -----HHHHHHHHh--hhhccCCCccEEee-cCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCc
Q 009226 252 -----NRLALYNSS--IGRFQNALGALIYP-IYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ 323 (539)
Q Consensus 252 -----~~i~~~l~s--~g~~g~~~ga~lyp-~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~ 323 (539)
..+...+.. .+.++.. ..+.+| ++|++.|+++|++.+...|+++++|++|++|..+ ++ .|++.+|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~--~~---~v~~~~G~ 261 (513)
T 4gde_A 188 APNLKAVTTNVILGKTAGNWGPN-ATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN--NK---TVTLQDGT 261 (513)
T ss_dssp CCCHHHHHHHHHHTCCCCSCBTT-BEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT--TT---EEEETTSC
T ss_pred ccchhhhhhhhhhcccccccccc-cceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc--CC---EEEEcCCC
Confidence 111111110 0111111 224455 8999999999999999999999999999999764 44 35578999
Q ss_pred EEEcCEEEEC
Q 009226 324 DILSHKLVLD 333 (539)
Q Consensus 324 ~i~Ad~VI~~ 333 (539)
++.||+||++
T Consensus 262 ~~~ad~vI~t 271 (513)
T 4gde_A 262 TIGYKKLVST 271 (513)
T ss_dssp EEEEEEEEEC
T ss_pred EEECCEEEEC
Confidence 9999999975
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.85 E-value=7.4e-21 Score=205.01 Aligned_cols=295 Identities=15% Similarity=0.117 Sum_probs=176.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++||+||..|+++|++|+|||+++++||++.|++.++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g---------------------------------- 85 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDG---------------------------------- 85 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETT----------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCC----------------------------------
Confidence 8999999999999999999999999999999999999999976532
Q ss_pred CCCCCeEEecCCCEEEec-ChHHHHHHhcCCccccccccc----ccceeeEccC--CceeecCCCHHHHHhccCCChhhH
Q 009226 103 QHPRNFNLDVSGPRVLFC-ADHAVDLMLKSGASHYLEFKS----IDATFMLDAD--AKLCSVPDSRAAIFKDKSLGLMEK 175 (539)
Q Consensus 103 ~~~~~f~ldl~Gp~ll~~-~~~lv~~L~~s~~~~y~ef~~----v~~~~~~~~~--g~l~~vP~s~~~vf~~~~ls~~ek 175 (539)
+.+|+ |++++.. ...+.+++.+.|+.+.+.... ....+++. + |+...+|.. +... .-.
T Consensus 86 -----~~~d~-G~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~--~~~~------~~~ 150 (495)
T 2vvm_A 86 -----YPYEM-GGTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNHFQLR-TNPTTSTYMTHE--AEDE------LLR 150 (495)
T ss_dssp -----EEEEC-SCCCBCTTSHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEE-SSTTCCEEECHH--HHHH------HHH
T ss_pred -----eeecC-CCeEecCccHHHHHHHHHcCCcceeecccccCCCceEEEec-CCCCceeecCHH--HHHH------HHH
Confidence 44566 4776643 346777777778754433321 12233333 3 555565541 1110 001
Q ss_pred HHHHHHHH----HHHhhcccCccccccccccccccCCcHHHHHHhcC--CChhHHHHHHHHHhcccCCcchhhhhccchh
Q 009226 176 NQLMRFFK----LVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK--LPHKIKSIVLYAIAMADYDQEVSEYVLKTRD 249 (539)
Q Consensus 176 ~~l~kfl~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~--l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~ 249 (539)
..+.+|++ ..+..... +...........+.+.++.+||++++ +++.++.++...+... +..+. ..+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~s~~~ 226 (495)
T 2vvm_A 151 SALHKFTNVDGTNGRTVLPF-PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLC-SGGTL--ENSSFGE 226 (495)
T ss_dssp HHHHHHHCSSSSTTTTTCSC-TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHH-HSSCT--TTSBHHH
T ss_pred HHHHHHHccchhhhhhcCCC-CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHh-cCCCc--chhhHHH
Confidence 11222222 11111000 00000000112345789999999877 8888777664322111 11111 2245544
Q ss_pred HHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCC-cEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcC
Q 009226 250 GINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (539)
Q Consensus 250 ~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~G-g~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad 328 (539)
.+..+......+..+... ..++++++|+++|+++|.+.+...| ++|+++++|++|..+ ++. +.|++.+|++++||
T Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad 302 (495)
T 2vvm_A 227 FLHWWAMSGYTYQGCMDC-LMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE--RDA-ARVTARDGREFVAK 302 (495)
T ss_dssp HHHHHHHTTSSHHHHHHH-HHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC--SSS-EEEEETTCCEEEEE
T ss_pred HHHHHHHcCCCHHHHHhh-hceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcC
Confidence 443322110011100000 1145789999999999999998888 999999999999875 444 46888888899999
Q ss_pred EEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009226 329 KLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 329 ~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l 376 (539)
+||++ |...+..+ .++|++|..+....+...+..+.+..+.++.++
T Consensus 303 ~vI~a~~~~~l~~i--~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 349 (495)
T 2vvm_A 303 RVVCTIPLNVLSTI--QFSPALSTERISAMQAGHVSMCTKVHAEVDNKD 349 (495)
T ss_dssp EEEECCCGGGGGGS--EEESCCCHHHHHHHHHCCCCCCEEEEEEESCGG
T ss_pred EEEECCCHHHHhhe--eeCCCCCHHHHHHHHhcCCCceeEEEEEECCcc
Confidence 99975 43333333 245666655443333444566778887788865
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.81 E-value=2.3e-19 Score=193.09 Aligned_cols=343 Identities=13% Similarity=0.114 Sum_probs=187.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCCcccc-chhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSL-SIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~~~GG~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
..+||+|||||++||++|..|+++| ++|+|+|+++++||++.++ ..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 56 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDEN------------------------------- 56 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTT-------------------------------
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCC-------------------------------
Confidence 4689999999999999999999999 8999999999999999985 322
Q ss_pred ccccCCCCCeEEecCCCEEEecCh-HHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHH
Q 009226 99 RLLSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQ 177 (539)
Q Consensus 99 ~~~~~~~~~f~ldl~Gp~ll~~~~-~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~ 177 (539)
.+.+|. |++.++... .+.+++.+.. .++..... ..+++. +|+++.+|.... + ..++..++..
T Consensus 57 --------g~~~~~-g~~~~~~~~~~~~~l~~~~~-~~~~~~~~--~~~~~~-~g~~~~~P~~~~--~--~~l~~~~~~~ 119 (484)
T 4dsg_A 57 --------GFTWDL-GGHVIFSHYQYFDDVMDWAV-QGWNVLQR--ESWVWV-RGRWVPYPFQNN--I--HRLPEQDRKR 119 (484)
T ss_dssp --------SCEEES-SCCCBCCSBHHHHHHHHHHC-SCEEEEEC--CCEEEE-TTEEEESSGGGC--G--GGSCHHHHHH
T ss_pred --------CcEEee-CCcccccChHHHHHHHHHHh-hhhhhccC--ceEEEE-CCEEEEeCccch--h--hhCCHHHHHH
Confidence 244566 366555444 3444444432 33332222 123333 789999884211 1 2233333322
Q ss_pred -HHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHH----HHHHHHHhcccCCcchhhhhccchhHH-
Q 009226 178 -LMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIK----SIVLYAIAMADYDQEVSEYVLKTRDGI- 251 (539)
Q Consensus 178 -l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~----~~l~~~i~l~~~~~~~~~~~~s~~~~l- 251 (539)
+..++.. ... .....+.++.+|+.+. +.+.+. ..+...+.. .+. .++++..++
T Consensus 120 ~~~~ll~~-~~~-------------~~~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~--~~~----~~ls~~~~~~ 178 (484)
T 4dsg_A 120 CLDELVRS-HAR-------------TYTEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWA--VPP----CLMSTEWVEE 178 (484)
T ss_dssp HHHHHHHH-HHC-------------CCSSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHS--SCG----GGBCSSSCTT
T ss_pred HHHHHHHH-Hhc-------------cCCCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcC--CCH----HHhcHHHHhc
Confidence 2233332 100 0123457899998753 111111 111112111 111 123332211
Q ss_pred -------HH-HHHHHHhhhh--ccCCCccEEeec-CCcChHHHHHHHHHHHCCcEEEeC--CcceEEEEecCCCcEEEEE
Q 009226 252 -------NR-LALYNSSIGR--FQNALGALIYPI-YGQGELPQAFCRRAAVKGCLYVLR--MPVISLLTDQNSGSYKGVR 318 (539)
Q Consensus 252 -------~~-i~~~l~s~g~--~g~~~ga~lyp~-gG~geL~qal~r~~a~~Gg~i~L~--~~V~~I~~~~~~g~~~gV~ 318 (539)
.. +...+..... ++ ..+.|.||. ||++.|+++|++.+.. ..|+++ ++|++|..+ ++ +|+
T Consensus 179 r~~~~~l~~~~~~~~~~~~~~~~~-~~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~--~~---~v~ 250 (484)
T 4dsg_A 179 RVAPVDLERIRRNIQENRDDLGWG-PNATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD--AK---TIT 250 (484)
T ss_dssp TSCCCCHHHHHHHHHHTCCCCCCS-TTSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT--TT---EEE
T ss_pred cccCCCHHHHHHHHhhcccccCCC-ccceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec--CC---EEE
Confidence 11 1111111000 11 123478886 7999999998875432 389999 569999765 44 355
Q ss_pred eCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC-CCceEEEeCCCCCCCCC
Q 009226 319 LASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD-LSNFLVIFPPRSLFPEQ 396 (539)
Q Consensus 319 l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~-~~~~~~~~p~~~~~~~~ 396 (539)
+++|+++.||+||++ |...+..++.+..+++++..........+..+....+.++.+.... +....+.+|....
T Consensus 251 ~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~---- 326 (484)
T 4dsg_A 251 FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTS---- 326 (484)
T ss_dssp ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTC----
T ss_pred ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCC----
Confidence 689999999999975 3332222221111122332222222334555555556677764321 2345667775432
Q ss_pred CceEEEEEeCCC-CccCCCCcEEEEEEEeecc--ccchHHHHHHHHHHHHhh
Q 009226 397 VTSIRVLQLGGN-LAVCPLGMFVLYFSALCDE--VNQGKKLLHAALSALQKL 445 (539)
Q Consensus 397 ~~~v~v~~~ss~-~~~cP~G~~vi~~st~~~~--~~~~~~~l~~~~~~l~~~ 445 (539)
+...+..+++- ...+|+|+.++.+...... ..+-+++++.+++-|...
T Consensus 327 -~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~ 377 (484)
T 4dsg_A 327 -PFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLAS 377 (484)
T ss_dssp -SCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHT
T ss_pred -eEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHc
Confidence 23455556554 4679999888876643321 123356777777777653
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.76 E-value=6e-18 Score=183.46 Aligned_cols=278 Identities=15% Similarity=0.147 Sum_probs=152.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYAS 98 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (539)
+..+||||||||++||+||..|+++| ++|+|||+++++||++.|+...
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~------------------------------- 54 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY------------------------------- 54 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------------------
Confidence 45689999999999999999999999 9999999999999999996541
Q ss_pred ccccCCCCCeEEecCCCEEEecC--hHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCCh-hhH
Q 009226 99 RLLSQHPRNFNLDVSGPRVLFCA--DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL-MEK 175 (539)
Q Consensus 99 ~~~~~~~~~f~ldl~Gp~ll~~~--~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~-~ek 175 (539)
..+.+|+ |++++... .++.+++.+.++.... ..+.+ .+|+...++.+...+........ .-.
T Consensus 55 -------~G~~~D~-G~~~~~~~~~~~~~~~~~~lg~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (516)
T 1rsg_A 55 -------QGRKYDI-GASWHHDTLTNPLFLEEAQLSLNDGR------TRFVF-DDDNFIYIDEERGRVDHDKELLLEIVD 119 (516)
T ss_dssp -------GGCEEES-SCCEECCTTTCHHHHHHHHHHHHHCC------CCEEC-CCCCCEEEETTTEECTTCTTTCHHHHH
T ss_pred -------CCcEEec-CCeEEecCCCChHHHHHHHhCCCCcc------eeEEE-CCCCEEEEcCCCccccccHHHHHHHHH
Confidence 1245677 57777532 3455555444431110 01111 13333222221111100000000 001
Q ss_pred HHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhc------CCChhHHHHHHHHHhc----ccCCcchhhhhc
Q 009226 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKM------KLPHKIKSIVLYAIAM----ADYDQEVSEYVL 245 (539)
Q Consensus 176 ~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~------~l~~~l~~~l~~~i~l----~~~~~~~~~~~~ 245 (539)
..+.++.... ... .....+.++.+|++++ .+++....++...+.. ..... ..+
T Consensus 120 ~~~~~~~~~~---~~~----------~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~----~~~ 182 (516)
T 1rsg_A 120 NEMSKFAELE---FHQ----------HLGVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDW----KLL 182 (516)
T ss_dssp HHHHHHHHHH---C-----------------CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCT----TTS
T ss_pred HHHHHHHHHH---hhh----------ccCCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCCh----HHC
Confidence 1122222111 000 0112357788877642 2333222221111100 01111 112
Q ss_pred cchhHHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEE
Q 009226 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI 325 (539)
Q Consensus 246 s~~~~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i 325 (539)
+.... +.... +...++++ ++.|+++|++.+ .+++|++|++|++|..+ ++..+.|++.+|+++
T Consensus 183 s~~~~----------~~~~~---~~~~~~~g-~~~l~~~l~~~l--~~~~i~~~~~V~~I~~~--~~~~v~v~~~~g~~~ 244 (516)
T 1rsg_A 183 SAKDT----------YFGHQ---GRNAFALN-YDSVVQRIAQSF--PQNWLKLSCEVKSITRE--PSKNVTVNCEDGTVY 244 (516)
T ss_dssp BHHHH----------CCCCS---SCCEEESC-HHHHHHHHHTTS--CGGGEETTCCEEEEEEC--TTSCEEEEETTSCEE
T ss_pred ChHHH----------Hhhcc---CcchhhhC-HHHHHHHHHHhC--CCCEEEECCEEEEEEEc--CCCeEEEEECCCcEE
Confidence 22110 00111 11346777 888888776533 24689999999999875 333467888899999
Q ss_pred EcCEEEEC-CCCCCCCC---------CcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCC
Q 009226 326 LSHKLVLD-PSFTVPGS---------LASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (539)
Q Consensus 326 ~Ad~VI~~-p~~~~~~l---------~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~ 378 (539)
+||+||++ |...+... ...+.|+||..+....++..++.+.+.++.+++++=+
T Consensus 245 ~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~ 307 (516)
T 1rsg_A 245 NADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWS 307 (516)
T ss_dssp EEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSC
T ss_pred ECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCC
Confidence 99999975 33222110 1246677888776665666788899999999999743
No 19
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.74 E-value=1.2e-16 Score=171.28 Aligned_cols=286 Identities=11% Similarity=0.091 Sum_probs=156.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
..+||+|||+|++||++|..|++.|+ +|+|+|+++++||++.+....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~------------------------------- 51 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAG------------------------------- 51 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETT-------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCC-------------------------------
Confidence 46899999999999999999999999 8999999999999999975432
Q ss_pred cccCCCCCeEEecCCCEEEec-----ChHHHHHHhc-CCccccc-ccccccceeeEccCCceeecCCCHHHHHhccCCCh
Q 009226 100 LLSQHPRNFNLDVSGPRVLFC-----ADHAVDLMLK-SGASHYL-EFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGL 172 (539)
Q Consensus 100 ~~~~~~~~f~ldl~Gp~ll~~-----~~~lv~~L~~-s~~~~y~-ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~ 172 (539)
+.+|+ |++++.. ...+.+++.+ .++.... .|... ..+++..+|+..+.+.. ...+.
T Consensus 52 --------~~~d~-g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~-~~~~~~~~g~~~~~~~~-~~~~~------ 114 (472)
T 1b37_A 52 --------INVEL-GANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYL-AQNVYKEDGGVYDEDYV-QKRIE------ 114 (472)
T ss_dssp --------EEEES-SCCEEEEESSSSCCTHHHHHHTTSCCCEEECCCTTG-GGCEECSSSSBCCHHHH-HHHHH------
T ss_pred --------cEEee-CCeEEeccCCCCCCHHHHHHHhhcCCceeeccCccc-cceeEcCCCCCCCHHHH-HHHHH------
Confidence 34566 4666642 2356777777 6765432 12221 11233335655432110 01110
Q ss_pred hhHHHHHHHHHHHHhhcccCccccccccccccccCCcHHH--HHHhcC---CChhHHHHHHHHH-hc-ccCCcchhhhhc
Q 009226 173 MEKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAE--FLTKMK---LPHKIKSIVLYAI-AM-ADYDQEVSEYVL 245 (539)
Q Consensus 173 ~ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--fL~~~~---l~~~l~~~l~~~i-~l-~~~~~~~~~~~~ 245 (539)
....+.+|...+..... ..++.+.++.+ ++.+.. ....+..++.... .+ ...+. ..+
T Consensus 115 -~~~~~~~~~~~~~~~~~-----------~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 178 (472)
T 1b37_A 115 -LADSVEEMGEKLSATLH-----------ASGRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPP----RVT 178 (472)
T ss_dssp -HHHHHHHHHHHHHHTSC-----------TTCTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCG----GGB
T ss_pred -HHHHHHHHHHHHHHhhc-----------cccchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccc----ccc
Confidence 00112222222211110 01123344433 454322 1112222222111 00 01111 112
Q ss_pred cchhHHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHC--------CcEEEeCCcceEEEEecCCCcEEEE
Q 009226 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVK--------GCLYVLRMPVISLLTDQNSGSYKGV 317 (539)
Q Consensus 246 s~~~~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~--------Gg~i~L~~~V~~I~~~~~~g~~~gV 317 (539)
+...... ...| ..++.. ..+.++++|++.|+++|++.+... |++|+++++|++|..+ ++++ .|
T Consensus 179 s~~~~~~-~~~~----~~~~~~-~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~--~~~v-~v 249 (472)
T 1b37_A 179 SLQNTVP-LATF----SDFGDD-VYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS--PGGV-TV 249 (472)
T ss_dssp BSTTTSS-CHHH----HHHCSE-EEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC--SSCE-EE
T ss_pred chhhccc-cccc----cccCCc-eeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc--CCcE-EE
Confidence 2211110 0111 112211 113345899999999998766543 7899999999999876 4554 58
Q ss_pred EeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCC
Q 009226 318 RLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPD 379 (539)
Q Consensus 318 ~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~ 379 (539)
++.+|++++||+||++ |...+..+...+.|+||+.+....++..++.+.+..+.+++|+-+.
T Consensus 250 ~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~ 312 (472)
T 1b37_A 250 KTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPE 312 (472)
T ss_dssp EETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCC
T ss_pred EECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCC
Confidence 8889999999999975 4333233222355667665443333344666778888889886543
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.72 E-value=1.6e-16 Score=167.66 Aligned_cols=287 Identities=15% Similarity=0.108 Sum_probs=156.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLLS 102 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (539)
+||||||||++|++||..|+++|++|+|||+++++||++.+.+..-.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~ci--------------------------------- 48 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNV--------------------------------- 48 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSS---------------------------------
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCC---------------------------------
Confidence 79999999999999999999999999999999999999988654310
Q ss_pred CCCCCeEEecCCCEEEec--ChHHHHHHhcCCcccccccccccceeeE-ccCCceeec-CCCHHHHHhccCCChhhHHHH
Q 009226 103 QHPRNFNLDVSGPRVLFC--ADHAVDLMLKSGASHYLEFKSIDATFML-DADAKLCSV-PDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 103 ~~~~~f~ldl~Gp~ll~~--~~~lv~~L~~s~~~~y~ef~~v~~~~~~-~~~g~l~~v-P~s~~~vf~~~~ls~~ek~~l 178 (539)
..+.+++ |++++.. ...+.+++.+.|+........ ....+ ..++++... |... +.. ..-+..+
T Consensus 49 ---pg~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~ 115 (431)
T 3k7m_X 49 ---PGLRVEI-GGAYLHRKHHPRLAAELDRYGIPTAAASEF--TSFRHRLGPTAVDQAFPIPG-SEA------VAVEAAT 115 (431)
T ss_dssp ---TTCEEES-SCCCBCTTTCHHHHHHHHHHTCCEEECCCC--CEECCBSCTTCCSSSSCCCG-GGH------HHHHHHH
T ss_pred ---CCceEec-CCeeeCCCCcHHHHHHHHHhCCeeeecCCC--CcEEEEecCCeecCCCCCCH-HHH------HHHHHHH
Confidence 1223455 3554433 234555665555542211111 11111 112222211 1111 100 0111223
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHh-cccCCcchhhhhccchhHHHHHHHH
Q 009226 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIA-MADYDQEVSEYVLKTRDGINRLALY 257 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~-l~~~~~~~~~~~~s~~~~l~~i~~~ 257 (539)
.+++..........+.. .....+. +.++.+|+++.+.++..+.++...+. ...... .+++....+..+...
T Consensus 116 ~~l~~~~~~~~~~~~~~---~~~~~~~-d~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~~~~~~~ 187 (431)
T 3k7m_X 116 YTLLRDAHRIDLEKGLE---NQDLEDL-DIPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPA----DQASALWMLQLVAAH 187 (431)
T ss_dssp HHHHHHHTTCCTTTCTT---SSSCGGG-CSBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCT----TTSBHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCcc---Ccchhhh-cCCHHHHHHhcCCCHHHHHHHHHHHHHhcCCCh----hhhhHHHHHHHHHhc
Confidence 33433333221111100 0111222 38999999998888877765432111 111111 123444433222211
Q ss_pred HHhhh--hccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-C
Q 009226 258 NSSIG--RFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-P 334 (539)
Q Consensus 258 l~s~g--~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p 334 (539)
-..+. ..+ ... ++.+|++.+++++. +..| +|++|++|++|..+ ++. +.|++.+|+++.||+||+. |
T Consensus 188 ~~~~~~~~~~---~~~-~~~~g~~~l~~~~~---~~~g-~i~~~~~V~~i~~~--~~~-v~v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 188 HYSILGVVLS---LDE-VFSNGSADLVDAMS---QEIP-EIRLQTVVTGIDQS--GDV-VNVTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp TSCHHHHHHT---CCE-EETTCTHHHHHHHH---TTCS-CEESSCCEEEEECS--SSS-EEEEETTSCCEEEEEEEECSC
T ss_pred CCccceeecc---hhh-hcCCcHHHHHHHHH---hhCC-ceEeCCEEEEEEEc--CCe-EEEEECCCCEEEeCEEEEecC
Confidence 00000 111 113 77899998888664 4566 99999999999865 444 4588888988999999975 3
Q ss_pred CCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009226 335 SFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 335 ~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l 376 (539)
...+..+ .+.|++|..+.........+...+...-++.++
T Consensus 257 ~~~l~~i--~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~ 296 (431)
T 3k7m_X 257 MNTWRRI--VFTPALPERRRSVIEEGHGGQGLKILIHVRGAE 296 (431)
T ss_dssp GGGGGGS--EEESCCCHHHHHHHHHCCCCCEEEEEEEEESCC
T ss_pred cchHhhe--eeCCCCCHHHHHHHHhCCCcceEEEEEEECCCC
Confidence 2222222 245566654443333334556677777778876
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.71 E-value=3.8e-16 Score=168.27 Aligned_cols=284 Identities=12% Similarity=0.080 Sum_probs=156.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
..+||||||||++||+||..|++.|++|+|||+++++||++.++....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~-------------------------------- 79 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEE-------------------------------- 79 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETT--------------------------------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCC--------------------------------
Confidence 458999999999999999999999999999999999999998865311
Q ss_pred ccCCCCCeEEecCCCEEEecCh-HHHHHHhcCCccccccccccc-ceeeEccCCceeecCC---CHHHHHhccCCChhhH
Q 009226 101 LSQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSID-ATFMLDADAKLCSVPD---SRAAIFKDKSLGLMEK 175 (539)
Q Consensus 101 ~~~~~~~f~ldl~Gp~ll~~~~-~lv~~L~~s~~~~y~ef~~v~-~~~~~~~~g~l~~vP~---s~~~vf~~~~ls~~ek 175 (539)
..+.+|+ |++.+.... .+.+++.+.|+... .|...+ ..++.. +|...+.+. .. ..+. ..+.+.++
T Consensus 80 -----~~~~~~~-g~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~g~~~~~~~~~~~~-~~~~-~~~~~~~~ 149 (498)
T 2iid_A 80 -----AGWYANL-GPMRLPEKHRIVREYIRKFDLRLN-EFSQENDNAWYFI-KNIRKKVGEVKKDP-GLLK-YPVKPSEA 149 (498)
T ss_dssp -----TTEEEES-SCCCEETTCHHHHHHHHHTTCCEE-EECSCCTTSEEEE-TTEEEEHHHHHHCG-GGGC-CCCCGGGT
T ss_pred -----CCchhhc-CcccccchHHHHHHHHHHhCCCce-eecccCCccEEEe-CCeeecccccccCc-cccc-cCCCcccc
Confidence 1233455 355554433 45556666665321 221111 111111 333221110 00 0000 01111111
Q ss_pred ----H-----HHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcC-CChhHHHHHHHHHhcccCCcchhhhhc
Q 009226 176 ----N-----QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMK-LPHKIKSIVLYAIAMADYDQEVSEYVL 245 (539)
Q Consensus 176 ----~-----~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~-l~~~l~~~l~~~i~l~~~~~~~~~~~~ 245 (539)
. .+.+++..+.... .......+...++.+|+++.+ +++..+..+...+... ... ..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~----~~ 215 (498)
T 2iid_A 150 GKSAGQLYEESLGKVVEELKRTN--------CSYILNKYDTYSTKEYLIKEGDLSPGAVDMIGDLLNED--SGY----YV 215 (498)
T ss_dssp TCCHHHHHHHHTHHHHHHHHHSC--------HHHHHHHHTTSBHHHHHHHTSCCCHHHHHHHHHHTTCG--GGT----TS
T ss_pred CCCHHHHHHHHHHHHHHHHhhcc--------HHHHHHHhhhhhHHHHHHHccCCCHHHHHHHHHhcCcc--cch----hH
Confidence 0 1111221111110 001112345578999999865 5665554432211000 000 01
Q ss_pred cchhHHHHHHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCc--
Q 009226 246 KTRDGINRLALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-- 323 (539)
Q Consensus 246 s~~~~l~~i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~-- 323 (539)
+..+++... .... .+ ..+.++.+|++.|+++|++.+ +.+|++|++|++|..+ +++ +.|++.+|+
T Consensus 216 ~~~~~~~~~----~~~~-~~---~~~~~~~gG~~~l~~~l~~~l---~~~i~~~~~V~~I~~~--~~~-v~v~~~~~~~~ 281 (498)
T 2iid_A 216 SFIESLKHD----DIFA-YE---KRFDEIVDGMDKLPTAMYRDI---QDKVHFNAQVIKIQQN--DQK-VTVVYETLSKE 281 (498)
T ss_dssp BHHHHHHHH----HHHT-TC---CCEEEETTCTTHHHHHHHHHT---GGGEESSCEEEEEEEC--SSC-EEEEEECSSSC
T ss_pred HHHHHHHHH----hccc-cC---cceEEeCCcHHHHHHHHHHhc---ccccccCCEEEEEEEC--CCe-EEEEEecCCcc
Confidence 111111111 1111 11 226789999999999987654 3489999999999876 444 467666665
Q ss_pred --EEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009226 324 --DILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 324 --~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l 376 (539)
+++||+||++ |...+..+ .++|+||..+....++..++.+.+.++.+++++
T Consensus 282 ~~~~~ad~vI~t~p~~~~~~i--~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~ 335 (498)
T 2iid_A 282 TPSVTADYVIVCTTSRAVRLI--KFNPPLLPKKAHALRSVHYRSGTKIFLTCTTKF 335 (498)
T ss_dssp CCEEEESEEEECSCHHHHTTS--EEESCCCHHHHHHHHHCCEECEEEEEEEESSCG
T ss_pred cceEEeCEEEECCChHHHhhe--ecCCCCCHHHHHHHHhCCCcceeEEEEEeCCCC
Confidence 5899999975 33333332 245667766554434455677888888889885
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.70 E-value=2.2e-16 Score=166.38 Aligned_cols=247 Identities=14% Similarity=0.162 Sum_probs=136.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
..+||||||||++||+||..|+++| ++|+|+|+++++||+++|++.+|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G------------------------------- 53 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG------------------------------- 53 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT-------------------------------
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC-------------------------------
Confidence 4589999999999999999999999 99999999999999999976543
Q ss_pred cccCCCCCeEEecCCCEEEecC-hHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHH
Q 009226 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQL 178 (539)
Q Consensus 100 ~~~~~~~~f~ldl~Gp~ll~~~-~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l 178 (539)
+.+|+ |++++... ..+.+++.+.|+... .......+.+ .+|+.. .|.. +.... ......+
T Consensus 54 --------~~~d~-G~~~~~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~-~~g~~~-~~~~--~~~~~----~~~~~~~ 114 (424)
T 2b9w_A 54 --------RRYEM-GAIMGVPSYDTIQEIMDRTGDKVD--GPKLRREFLH-EDGEIY-VPEK--DPVRG----PQVMAAV 114 (424)
T ss_dssp --------EECCS-SCCCBCTTCHHHHHHHHHHCCCCC--SCCCCEEEEC-TTSCEE-CGGG--CTTHH----HHHHHHH
T ss_pred --------ccccc-CceeecCCcHHHHHHHHHhCCccc--cccccceeEc-CCCCEe-cccc--Ccccc----hhHHHHH
Confidence 23344 35554332 356666766665321 1111122222 355543 2211 00000 0011122
Q ss_pred HHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHHHHHhcccCCcchhhhhccchhHHHHHHHHH
Q 009226 179 MRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVLYAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (539)
Q Consensus 179 ~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~~~i~l~~~~~~~~~~~~s~~~~l~~i~~~l 258 (539)
.++...+.......... .......+....|+.+|+++.+.+. +.+.+...+....+. ++ ..+++...+..+...
T Consensus 115 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~a~~~~~~~~~~- 188 (424)
T 2b9w_A 115 QKLGQLLATKYQGYDAN-GHYNKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HF--DNVPAAYVLKYLDFV- 188 (424)
T ss_dssp HHHHHHHHTTTTTTTSS-SSSSCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CT--TTSBHHHHHHHSCHH-
T ss_pred HHHHHHHhhhhhhcccc-cchhhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-Ch--HhcCHHHHHHhhhHh-
Confidence 33333222211100000 0000112345689999999877764 334322111111121 11 223443332211110
Q ss_pred HhhhhccCCCccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 259 SSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 259 ~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..+. +.. +...++.+|++++++++.+ ..+.++++|++|++|..+ ++++ .|++.+|+ ++||+||++
T Consensus 189 ~~~~-~~~--~~~~~~~~g~~~l~~~l~~---~l~~~v~~~~~V~~i~~~--~~~v-~v~~~~g~-~~ad~Vv~a 253 (424)
T 2b9w_A 189 TMMS-FAK--GDLWTWADGTQAMFEHLNA---TLEHPAERNVDITRITRE--DGKV-HIHTTDWD-RESDVLVLT 253 (424)
T ss_dssp HHHH-HHH--TCCBCCTTCHHHHHHHHHH---HSSSCCBCSCCEEEEECC--TTCE-EEEESSCE-EEESEEEEC
T ss_pred hhhc-ccC--CceEEeCChHHHHHHHHHH---hhcceEEcCCEEEEEEEE--CCEE-EEEECCCe-EEcCEEEEC
Confidence 0011 111 1134778999999997754 567789999999999875 5554 58777775 899999975
No 23
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.68 E-value=2.8e-16 Score=168.84 Aligned_cols=302 Identities=14% Similarity=0.113 Sum_probs=153.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
+..+||+|||||++||+||..|+++|++|+|||+++++||++.++...+ .+....+.. .
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~--~~~~~~~~~-------------------~ 67 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS--EETDLSGET-------------------Q 67 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC--EEECTTSCE-------------------E
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc--ccccccchh-------------------h
Confidence 3468999999999999999999999999999999999999999876532 111000000 0
Q ss_pred cccCCCCCeEEecCCCEEEecChHHHHHHhcCCccccccccccc-ceeeE-ccC----CceeecCCCHHHHHhccCCChh
Q 009226 100 LLSQHPRNFNLDVSGPRVLFCADHAVDLMLKSGASHYLEFKSID-ATFML-DAD----AKLCSVPDSRAAIFKDKSLGLM 173 (539)
Q Consensus 100 ~~~~~~~~f~ldl~Gp~ll~~~~~lv~~L~~s~~~~y~ef~~v~-~~~~~-~~~----g~l~~vP~s~~~vf~~~~ls~~ 173 (539)
.......+.++. |+..+.....+.+++.+.|+... .+.... ..+++ ..+ |+..++|....+.+
T Consensus 68 -~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------- 136 (489)
T 2jae_A 68 -KCTFSEGHFYNV-GATRIPQSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAAKADTF-------- 136 (489)
T ss_dssp -ECCCCTTCEEES-SCCCEETTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHHHHHHH--------
T ss_pred -hhcccCCCcCCc-chhhcccHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHHhhhhh--------
Confidence 001123455677 47766655577888888877421 122111 12333 222 54444332111100
Q ss_pred hHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChh--------HHHHHHHHHhcccCCcchhhhhc
Q 009226 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHK--------IKSIVLYAIAMADYDQEVSEYVL 245 (539)
Q Consensus 174 ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~--------l~~~l~~~i~l~~~~~~~~~~~~ 245 (539)
..+..++......... . .......+.++.+|+++++-... +..++...-......... ..
T Consensus 137 --~~~~~l~~~~~~~~~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 204 (489)
T 2jae_A 137 --GYMSELLKKATDQGAL-D------QVLSREDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEK---KP 204 (489)
T ss_dssp --HHHHHHHHHHHHHTTT-T------TTSCHHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEEC---CC
T ss_pred --ccHHHHHHHHHhcccc-c------cccchhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCC---CC
Confidence 0111111111110000 0 00001123467778776432100 000000000000000000 00
Q ss_pred cchhHHHH--HHHHHHhhhhccCCCccEEeecCCcChHHHHHHHHHHHCC-cEEEeCCcceEEEEecCCCcEEEEEeCCC
Q 009226 246 KTRDGINR--LALYNSSIGRFQNALGALIYPIYGQGELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRLASG 322 (539)
Q Consensus 246 s~~~~l~~--i~~~l~s~g~~g~~~ga~lyp~gG~geL~qal~r~~a~~G-g~i~L~~~V~~I~~~~~~g~~~gV~l~~G 322 (539)
.....+.. +..++........ .+.+.++++|++.|+++|++.+ + ++|++|++|++|..+ ++++ .|++.+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gG~~~l~~~l~~~l---~~~~i~~~~~V~~i~~~--~~~v-~v~~~~g 277 (489)
T 2jae_A 205 FAMQEVIRSGIGRNFSFDFGYDQ-AMMMFTPVGGMDRIYYAFQDRI---GTDNIVFGAEVTSMKNV--SEGV-TVEYTAG 277 (489)
T ss_dssp CCHHHHHHHTTTTTGGGGGCTTT-SSSEEEETTCTTHHHHHHHHHH---CGGGEETTCEEEEEEEE--TTEE-EEEEEET
T ss_pred cCHHHHhhhhHHHHHhhhhcccc-CccEEeecCCHHHHHHHHHHhc---CCCeEEECCEEEEEEEc--CCeE-EEEEecC
Confidence 00000000 0001111000111 1236789999999999987754 4 789999999999887 5553 4766666
Q ss_pred ---cEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCC
Q 009226 323 ---QDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 323 ---~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l 376 (539)
++++||+||++ |...+..+. + ++|+.+....+...+..+.+..+.+++++
T Consensus 278 ~~~~~~~ad~vI~a~p~~~l~~l~--~--~l~~~~~~~l~~~~~~~~~kv~l~~~~~~ 331 (489)
T 2jae_A 278 GSKKSITADYAICTIPPHLVGRLQ--N--NLPGDVLTALKAAKPSSSGKLGIEYSRRW 331 (489)
T ss_dssp TEEEEEEESEEEECSCHHHHTTSE--E--CCCHHHHHHHHTEECCCEEEEEEEESSCH
T ss_pred CeEEEEECCEEEECCCHHHHHhCc--c--CCCHHHHHHHHhCCCccceEEEEEeCCCC
Confidence 67999999975 433334432 1 34433332223334667788888888875
No 24
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.59 E-value=7.4e-16 Score=161.70 Aligned_cols=231 Identities=14% Similarity=0.154 Sum_probs=128.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASR 99 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~-G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (539)
.++||||||||++||+||..|+++ |++|+|+|+++++||++.+...+.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~------------------------------- 54 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQ------------------------------- 54 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTT-------------------------------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccC-------------------------------
Confidence 469999999999999999999999 999999999999999999976420
Q ss_pred cccCCCCCeEEecCCCEEEecC-hHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHH---HHhccCCChhhH
Q 009226 100 LLSQHPRNFNLDVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAA---IFKDKSLGLMEK 175 (539)
Q Consensus 100 ~~~~~~~~f~ldl~Gp~ll~~~-~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~---vf~~~~ls~~ek 175 (539)
.++.+|..|++++... ..+.+++.+.++.. .+. ...+++ .+|+.+++|.+... ++.. .+++.
T Consensus 55 ------~g~~~~~~G~~~~~~~~~~~~~~~~~~g~~~--~~~--~~~~~~-~~G~~~~~p~~~~~~~~l~~~-~~~~~-- 120 (399)
T 1v0j_A 55 ------TGIEVHKYGAHLFHTSNKRVWDYVRQFTDFT--DYR--HRVFAM-HNGQAYQFPMGLGLVSQFFGK-YFTPE-- 120 (399)
T ss_dssp ------TCCEEETTSCCCEEESCHHHHHHHTTTCCBC--CCC--CCEEEE-ETTEEEEESSSHHHHHHHHTS-CCCHH--
T ss_pred ------CCEEEEeCCCcEEcCCcHHHHHHHHHhhhhh--ccc--cceEEE-ECCEEEeCCCCHHHHHHHhcc-cCCHH--
Confidence 1233431257766543 36677777766521 221 122333 38899999986432 2221 11222
Q ss_pred HHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHHHHH-HHHhcccCCcchhhhhccchhHHHHH
Q 009226 176 NQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGINRL 254 (539)
Q Consensus 176 ~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~~l~-~~i~l~~~~~~~~~~~~s~~~~l~~i 254 (539)
.+.+++....... ....+.++.+|+.+..-.+....++. +.-+... .++ .++++... .++
T Consensus 121 -~~~~~l~~~~~~~-------------~~~~~~s~~e~l~~~~g~~~~~~~~~~~~~~~~~--~~~--~~ls~~~~-~~~ 181 (399)
T 1v0j_A 121 -QARQLIAEQAAEI-------------DTADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQ--TDP--KELPAANI-TRL 181 (399)
T ss_dssp -HHHHHHHHHGGGS-------------CTTC----CCHHHHHHCHHHHHHHTHHHHHHHHT--SCG--GGSCGGGC-SCC
T ss_pred -HHHHHHHHHhhcc-------------CCCCcccHHHHHHHHHhHHHHHHHHHHHHHhhcC--CCh--hhcChHhh-hcc
Confidence 2222222211100 01234678888876322223333332 2212211 121 22444332 000
Q ss_pred HHHHHhhhhccCCCccEE-eecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEE-EcCEEEE
Q 009226 255 ALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDI-LSHKLVL 332 (539)
Q Consensus 255 ~~~l~s~g~~g~~~ga~l-yp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i-~Ad~VI~ 332 (539)
.........+.. ..+. +|+||+++|+++|++ ..|++|+||++|++|.. + | . ++ .||+||+
T Consensus 182 ~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~-----v--~---~~~~aD~VI~ 243 (399)
T 1v0j_A 182 PVRYTFDNRYFS--DTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q-----L--R---PGSPAAPVVY 243 (399)
T ss_dssp CCCSSSCCCSCC--CSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H-----H--T---TTSTTCCEEE
T ss_pred eeEeccccchhh--hhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h-----h--h---hcccCCEEEE
Confidence 000000001111 1253 999999999998865 57899999999999842 1 2 1 34 6899997
Q ss_pred C
Q 009226 333 D 333 (539)
Q Consensus 333 ~ 333 (539)
+
T Consensus 244 t 244 (399)
T 1v0j_A 244 T 244 (399)
T ss_dssp C
T ss_pred C
Confidence 5
No 25
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.57 E-value=5.3e-14 Score=146.89 Aligned_cols=309 Identities=13% Similarity=0.123 Sum_probs=167.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccc-hhhhhhhhccCCCCCCCCCCCccccccccccc
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLS-IADLTHFLNSHSTPSSVCPDPLYSDVEISNYA 97 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (539)
....+||+|||||++||++|..|+++|++|+|+|+++++||++.+.. .+|
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G----------------------------- 76 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAG----------------------------- 76 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTS-----------------------------
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCC-----------------------------
Confidence 34579999999999999999999999999999999999999999864 222
Q ss_pred cccccCCCCCeEE-ecCCCEEEecC-hHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHh--ccCCChh
Q 009226 98 SRLLSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFK--DKSLGLM 173 (539)
Q Consensus 98 ~~~~~~~~~~f~l-dl~Gp~ll~~~-~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~--~~~ls~~ 173 (539)
+.+ |. ||+++... ..+.+++.+.+... .+ ....+++. +|+++++|.+...+.. ...+++.
T Consensus 77 ----------~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~-~g~l~~lP~~~~~~~~l~~~~~~~~ 140 (397)
T 3hdq_A 77 ----------VLIHPY-GPHIFHTNSKDVFEYLSRFTEWR--PY--QHRVLASV-DGQLLPIPINLDTVNRLYGLNLTSF 140 (397)
T ss_dssp ----------CEECTT-SCCCCEESCHHHHHHHHTSCCEE--EC--CCBEEEEE-TTEEEEESCCHHHHHHHHTCCCCHH
T ss_pred ----------ceEeec-CCcccCCChHHHHHHHHHhhhcc--cc--cccceEEE-CCEEEEcCCChHHHHHhhccCCCHH
Confidence 222 34 46665543 35666666655311 11 12233443 8999999987643211 2223332
Q ss_pred hHHHHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHh-cCCChhHHHHHH-HHHhcccCCcchhhhhccchhHH
Q 009226 174 EKNQLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTK-MKLPHKIKSIVL-YAIAMADYDQEVSEYVLKTRDGI 251 (539)
Q Consensus 174 ek~~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~-~~l~~~l~~~l~-~~i~l~~~~~~~~~~~~s~~~~l 251 (539)
.+..++.. .. .....+.++.+|+.+ ++ .+....++. +.-.. +..++ +++|+...
T Consensus 141 ---~~~~~l~~---~~------------~~~~~~~s~~e~~~~~~G-~~~~e~~~~py~~k~--~~~~~--~~Lsa~~~- 196 (397)
T 3hdq_A 141 ---QVEEFFAS---VA------------EKVEQVRTSEDVVVSKVG-RDLYNKFFRGYTRKQ--WGLDP--SELDASVT- 196 (397)
T ss_dssp ---HHHHHHHH---HC------------CCCSSCCBHHHHHHHHHH-HHHHHHHTHHHHHHH--HSSCG--GGSBTTTG-
T ss_pred ---HHHHHHhh---cc------------cCCCCCcCHHHHHHHhcC-HHHHHHHHHHHhCch--hCCCH--HHHHHHHH-
Confidence 22333331 10 112346789999875 43 222222222 22122 22222 23554321
Q ss_pred HHHHHHHHhhhhccCC--CccE-EeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcC
Q 009226 252 NRLALYNSSIGRFQNA--LGAL-IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSH 328 (539)
Q Consensus 252 ~~i~~~l~s~g~~g~~--~ga~-lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad 328 (539)
.++.. ...+.+. .+.| .+|++|.+.|.++|. +..|++|+||++|.++ ++++.+|
T Consensus 197 ~Rvp~----~~~~d~~yf~~~~qg~P~gGy~~l~e~l~---~~~g~~V~l~~~v~~~----------------~~~~~~d 253 (397)
T 3hdq_A 197 ARVPT----RTNRDNRYFADTYQAMPLHGYTRMFQNML---SSPNIKVMLNTDYREI----------------ADFIPFQ 253 (397)
T ss_dssp GGSCC----CSSCCCBSCCCSEEEEETTCHHHHHHHHT---CSTTEEEEESCCGGGT----------------TTTSCEE
T ss_pred HhcCc----ccccCccchhhhheeccCCCHHHHHHHHH---hccCCEEEECCeEEec----------------cccccCC
Confidence 11110 0001110 1224 389999999988764 4679999999999843 2234588
Q ss_pred EEEECCCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCCCCCCceEEEeCCCCCCCCCCceEEEEEeCCC
Q 009226 329 KLVLDPSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKPDLSNFLVIFPPRSLFPEQVTSIRVLQLGGN 408 (539)
Q Consensus 329 ~VI~~p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~~~~~~~~~~p~~~~~~~~~~~v~v~~~ss~ 408 (539)
+||.+.+. ..+ ++.. . .......+......++.+-.+ ....+.+|... +.-++.++.+-
T Consensus 254 ~vI~T~P~--d~~---~~~~----~----g~L~yrsl~~~~~~~~~~~~~--~~~~vn~~d~~------p~tRi~e~k~~ 312 (397)
T 3hdq_A 254 HMIYTGPV--DAF---FDFC----Y----GKLPYRSLEFRHETHDTEQLL--PTGTVNYPNDY------AYTRVSEFKHI 312 (397)
T ss_dssp EEEECSCH--HHH---TTTT----T----CCCCEEEEEEEEEEESSSCSC--SSSEEECSSSS------SCSEEEEHHHH
T ss_pred EEEEcCCH--HHH---HHHh----c----CCCCCceEEEEEEEeccccCC--CCeEEEeCCCC------cceEEEeeccc
Confidence 99965321 111 1100 0 111222232222335544222 35678887432 23467777664
Q ss_pred CccCCCCcEEEEEEEeecc--------ccchHHHHHHHHHH
Q 009226 409 LAVCPLGMFVLYFSALCDE--------VNQGKKLLHAALSA 441 (539)
Q Consensus 409 ~~~cP~G~~vi~~st~~~~--------~~~~~~~l~~~~~~ 441 (539)
++. |.++.+|..-..+.. ..+..++++.+.+.
T Consensus 313 ~~~-~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~ 352 (397)
T 3hdq_A 313 TGQ-RHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL 352 (397)
T ss_dssp HCC-CCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH
T ss_pred CCC-CCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH
Confidence 433 456777765544432 23455666666655
No 26
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.56 E-value=1.1e-13 Score=143.43 Aligned_cols=47 Identities=17% Similarity=0.340 Sum_probs=43.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC-CCCCCCccccch
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN-PFYGSHFSSLSI 66 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~-~~~GG~~~s~~~ 66 (539)
+..+||+|||||++||+||+.|+++|++|+|||++ +++||++.++..
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~ 89 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHA 89 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecc
Confidence 45689999999999999999999999999999999 999999998764
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.55 E-value=5.1e-15 Score=153.54 Aligned_cols=226 Identities=13% Similarity=0.168 Sum_probs=128.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCccccccccccccccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRLL 101 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (539)
++||+|||+|++||++|..|+++|++|+|+|+++++||++.++..++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g--------------------------------- 47 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEG--------------------------------- 47 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETT---------------------------------
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCC---------------------------------
Confidence 37999999999999999999999999999999999999999975432
Q ss_pred cCCCCCeEEecCCCEEEecCh-HHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhccCCChhhHHHHHH
Q 009226 102 SQHPRNFNLDVSGPRVLFCAD-HAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKDKSLGLMEKNQLMR 180 (539)
Q Consensus 102 ~~~~~~f~ldl~Gp~ll~~~~-~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~~~ls~~ek~~l~k 180 (539)
+.+|..||+++.... .+.+++.+.+.. ..+... ...+ .+|+...+|.+...+... +.......+.+
T Consensus 48 ------~~~~~~G~~~~~~~~~~~~~~~~~l~~~--~~~~~~--~~~~-~~g~~~~~p~~~~~~~~l--~~~~~~~~~~~ 114 (367)
T 1i8t_A 48 ------IQIHKYGAHIFHTNDKYIWDYVNDLVEF--NRFTNS--PLAI-YKDKLFNLPFNMNTFHQM--WGVKDPQEAQN 114 (367)
T ss_dssp ------EEEETTSCCCEEESCHHHHHHHHTTSCB--CCCCCC--CEEE-ETTEEEESSBSHHHHHHH--HCCCCHHHHHH
T ss_pred ------ceeeccCCceecCCCHHHHHHHHHhhhh--hhcccc--ceEE-ECCeEEEcCCCHHHHHHH--hccCCHHHHHH
Confidence 334312577665543 455555544431 122111 1222 378888898875432221 01111223344
Q ss_pred HHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHhcccCCcchhhhhccchhHHHHHHHHH
Q 009226 181 FFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRLALYN 258 (539)
Q Consensus 181 fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~-~l~-~~i~l~~~~~~~~~~~~s~~~~l~~i~~~l 258 (539)
|+...... .....+.++.+|+.+. +.+.+.+ ++. +..+..+.+. .++++... .++....
T Consensus 115 ~l~~~~~~-------------~~~~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~----~~lsa~~~-~~l~~~~ 175 (367)
T 1i8t_A 115 IINAQKKK-------------YGDKVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSA----KELPAFII-KRIPVRF 175 (367)
T ss_dssp HHHHHTTT-------------TCCCCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCG----GGSCTTSS-CCCCBCS
T ss_pred HHHHHhhc-------------cCCCCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCCh----HHcCHHHH-hhceeee
Confidence 44432221 0112457899999864 3333333 322 2212222221 22444321 0000000
Q ss_pred HhhhhccCCCccEE-eecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 259 SSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 259 ~s~g~~g~~~ga~l-yp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..-..+. .+.+. +|+||+++|+++|++ |++|+||++|++|. . + | ++.+|+||++
T Consensus 176 ~~~~~~~--~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~----~-~---v------~~~~D~VV~a 230 (367)
T 1i8t_A 176 TFDNNYF--SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDK----D-S---L------ASKAHRIIYT 230 (367)
T ss_dssp SSCCCSC--CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSH----H-H---H------HTTEEEEEEC
T ss_pred ccccccc--cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeec----h-h---h------hccCCEEEEe
Confidence 0000111 12354 999999999998865 68999999999883 1 1 2 1358999975
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.51 E-value=1.7e-14 Score=150.57 Aligned_cols=214 Identities=13% Similarity=0.159 Sum_probs=123.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchhhhhhhhccCCCCCCCCCCCcccccccccccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIADLTHFLNSHSTPSSVCPDPLYSDVEISNYASRL 100 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (539)
+++||+|||+|++||++|..|+++|++|+|+|+++++||++.+...+.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~-------------------------------- 49 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSE-------------------------------- 49 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTT--------------------------------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccC--------------------------------
Confidence 458999999999999999999999999999999999999999875521
Q ss_pred ccCCCCCeEE-ecCCCEEEecC-hHHHHHHhcCCcccccccccccceeeEccCCceeecCCCHHHHHhc--cCCChhhHH
Q 009226 101 LSQHPRNFNL-DVSGPRVLFCA-DHAVDLMLKSGASHYLEFKSIDATFMLDADAKLCSVPDSRAAIFKD--KSLGLMEKN 176 (539)
Q Consensus 101 ~~~~~~~f~l-dl~Gp~ll~~~-~~lv~~L~~s~~~~y~ef~~v~~~~~~~~~g~l~~vP~s~~~vf~~--~~ls~~ek~ 176 (539)
.++.+ |. |++++... ..+.+++.+.+.. ..+. ...+++ .+|+.+++|.+...+-.. ..+++ .
T Consensus 50 -----~g~~~~~~-G~~~~~~~~~~~~~~~~~l~~~--~~~~--~~~~~~-~~g~~~~~P~~~~~~~~l~~~~~~~---~ 115 (384)
T 2bi7_A 50 -----TNVMVHVY-GPHIFHTDNETVWNYVNKHAEM--MPYV--NRVKAT-VNGQVFSLPINLHTINQFFSKTCSP---D 115 (384)
T ss_dssp -----TCCEEETT-SCCCEEESCHHHHHHHHTTSCE--EECC--CCEEEE-ETTEEEEESCCHHHHHHHTTCCCCH---H
T ss_pred -----CCceEeeC-CceEECCCCHHHHHHHHHHhhh--cccc--cceEEE-ECCEEEECCCChhHHHHHhcccCCH---H
Confidence 12233 44 57766543 3566666666542 1111 122233 378888999875432211 11222 2
Q ss_pred HHHHHHHHHHhhcccCccccccccccccccCCcHHHHHHhcCCChhHHH-HHH-HHHhcccCCcchhhhhccchhHHHHH
Q 009226 177 QLMRFFKLVQGHLSLDESEENNVRISEEDLDSPFAEFLTKMKLPHKIKS-IVL-YAIAMADYDQEVSEYVLKTRDGINRL 254 (539)
Q Consensus 177 ~l~kfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~efL~~~~l~~~l~~-~l~-~~i~l~~~~~~~~~~~~s~~~~l~~i 254 (539)
.+.+++...... . ...+.++.+|+.+. +.+.+.+ ++. +..+... .++ .++++... .++
T Consensus 116 ~~~~~l~~~~~~-------------~-~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~--~~~--~~ls~~~~-~r~ 175 (384)
T 2bi7_A 116 EARALIAEKGDS-------------T-IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWG--MQP--SELPASIL-KRL 175 (384)
T ss_dssp HHHHHHHHHSCC-------------S-CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHS--SCG--GGSBGGGC-CSC
T ss_pred HHHHHHHHhhhc-------------c-CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhC--CCH--HHhCHHHH-hcc
Confidence 223333322110 0 12457899999865 3344333 322 2222222 221 22443321 000
Q ss_pred HHHHHhhhhccCCCccEE-eecCCcChHHHHHHHHHHHCCcEEEeCCcce-EE
Q 009226 255 ALYNSSIGRFQNALGALI-YPIYGQGELPQAFCRRAAVKGCLYVLRMPVI-SL 305 (539)
Q Consensus 255 ~~~l~s~g~~g~~~ga~l-yp~gG~geL~qal~r~~a~~Gg~i~L~~~V~-~I 305 (539)
.........+.. +.+. +|+||+++|+++|++ ..|++|++|++|+ +|
T Consensus 176 ~~~~~~~~~~~~--~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i 223 (384)
T 2bi7_A 176 PVRFNYDDNYFN--HKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEE 223 (384)
T ss_dssp CCCSSSCCCSCC--CSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGG
T ss_pred cccccccccccc--ccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhh
Confidence 000000001111 2354 999999999998864 4789999999999 77
No 29
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.49 E-value=2.3e-13 Score=153.56 Aligned_cols=99 Identities=13% Similarity=0.050 Sum_probs=70.6
Q ss_pred EEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhh
Q 009226 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQL 349 (539)
Q Consensus 271 ~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l 349 (539)
.....+|++.+.+++++ |..|++|++|++|..+ +++ +.|++.+|+++.||+||+. |...+......+.|+|
T Consensus 526 ~~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~--~~~-v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 526 HTLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS--GDE-VQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EEECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS--SSS-EEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred eEEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc--CCE-EEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 45678899999887753 6789999999999876 444 4688889999999999975 4333222112466777
Q ss_pred hhhhhhcccCCCcceEEEEEEEecCCCC
Q 009226 350 QESFQAFSLSDNKGKVARGICITRSSLK 377 (539)
Q Consensus 350 ~~~~~~l~~~~~~~~vsr~i~I~~~~l~ 377 (539)
|..+....++...+.+.+.++.+++++-
T Consensus 598 p~~~~~ai~~l~~g~~~KV~l~f~~~FW 625 (776)
T 4gut_A 598 SEKKMKAINSLGAGIIEKIALQFPYRFW 625 (776)
T ss_dssp CHHHHHHHHHEEEECCEEEEEECSSCTT
T ss_pred CHHHHHHHHhCCCeeEEEEEEecCcccc
Confidence 7755544344456677888888999864
No 30
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.42 E-value=2.8e-12 Score=142.95 Aligned_cols=101 Identities=11% Similarity=-0.031 Sum_probs=72.4
Q ss_pred cEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCCC
Q 009226 270 ALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGSL 342 (539)
Q Consensus 270 a~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~------G~~i~Ad~VI~~-p~~~~~~l~ 342 (539)
.+..+++|++.|+++|++ |..|+||++|++|..+ ++. +.|++.+ |+++.||+||++ |...+..+.
T Consensus 392 ~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~--~~~-v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~ 463 (662)
T 2z3y_A 392 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQP 463 (662)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEE--TTE-EEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSS
T ss_pred ceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEEC--CCc-EEEEEeecccCCCCeEEEeCEEEECCCHHHHhccc
Confidence 356889999999998865 4589999999999987 443 4566544 578999999976 433333210
Q ss_pred --cccchhhhhhhhhcccCCCcceEEEEEEEecCCCCC
Q 009226 343 --ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (539)
Q Consensus 343 --~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~ 378 (539)
+.+.|+||..+....++..++.+.+.++.+++++-+
T Consensus 464 ~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~ 501 (662)
T 2z3y_A 464 PAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 501 (662)
T ss_dssp CSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred CceEEcCCCCHHHHHHHHhCCccceeEEEEEcCccccc
Confidence 236777887655444555677889989899999754
No 31
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.41 E-value=3.1e-12 Score=145.38 Aligned_cols=102 Identities=12% Similarity=-0.009 Sum_probs=72.1
Q ss_pred ccEEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCC------CcEEEcCEEEEC-CCCCCCCC
Q 009226 269 GALIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS------GQDILSHKLVLD-PSFTVPGS 341 (539)
Q Consensus 269 ga~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~------G~~i~Ad~VI~~-p~~~~~~l 341 (539)
|.++.+++|++.|+++|++ +..|+||++|++|..+ ++. +.|++.+ |+++.||+||++ |...+..+
T Consensus 562 g~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~--~~g-V~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYT--ASG-CEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEE--TTE-EEEEEEESSSTTCEEEEEESEEEECCCHHHHHCS
T ss_pred CceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEc--CCc-EEEEEeecccCCCCeEEECCEEEECCCHHHHHhh
Confidence 3467889999999998865 3479999999999987 443 4566544 578999999976 43333331
Q ss_pred C--cccchhhhhhhhhcccCCCcceEEEEEEEecCCCCC
Q 009226 342 L--ASSHQQLQESFQAFSLSDNKGKVARGICITRSSLKP 378 (539)
Q Consensus 342 ~--~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~~ 378 (539)
. +.+.|+||..+....++..++.+.+.++.+++++-+
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~ 672 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWD 672 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSC
T ss_pred hcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccC
Confidence 0 236677877655443455577788988889998744
No 32
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.36 E-value=1.7e-11 Score=125.16 Aligned_cols=99 Identities=10% Similarity=0.003 Sum_probs=69.9
Q ss_pred EeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC-CCCCCCCCCcccchhhh
Q 009226 272 IYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD-PSFTVPGSLASSHQQLQ 350 (539)
Q Consensus 272 lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~ 350 (539)
+.+.+|+..+.+++++.. |++|+++++|++|..+ +++ +.|++.+|+++.||.||+. |......++...++.+|
T Consensus 105 ~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~--~~~-~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~ 178 (342)
T 3qj4_A 105 FVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLR--DDK-WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLIS 178 (342)
T ss_dssp EECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEEC--SSS-EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSC
T ss_pred eecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEc--CCE-EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccC
Confidence 466889999999887643 8999999999999876 444 4688888888999999964 44333454433344455
Q ss_pred hhhhhcccCCCcceEEEEEEEecCCC
Q 009226 351 ESFQAFSLSDNKGKVARGICITRSSL 376 (539)
Q Consensus 351 ~~~~~l~~~~~~~~vsr~i~I~~~~l 376 (539)
+......+...+..+....+.+++++
T Consensus 179 ~~~~~~l~~~~~~~~~~v~l~~~~~~ 204 (342)
T 3qj4_A 179 ECQRQQLEAVSYSSRYALGLFYEAGT 204 (342)
T ss_dssp HHHHHHHHTCCBCCEEEEEEECSSCC
T ss_pred HHHHHHHhcCCccccEEEEEEECCCC
Confidence 54443334556777887788888763
No 33
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.33 E-value=3.2e-12 Score=141.82 Aligned_cols=105 Identities=9% Similarity=-0.028 Sum_probs=70.0
Q ss_pred EEeecCCcChHHHHHHHHHHHCCcEEEeCCcce--EEEEecCCC-----cEEEE-EeCCCc--EEEcCEEEEC-CCCCC-
Q 009226 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVI--SLLTDQNSG-----SYKGV-RLASGQ--DILSHKLVLD-PSFTV- 338 (539)
Q Consensus 271 ~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~--~I~~~~~~g-----~~~gV-~l~~G~--~i~Ad~VI~~-p~~~~- 338 (539)
+.++.||++.|+++|.+.+.. |+.|+|+++|+ +|..+. ++ ..+.| ...+|+ ++.||+||++ |...+
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~-~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANAC-HSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEE-ECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred eeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECC-CCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 668999999999999886532 78899999999 998763 33 13456 446777 7899999984 32221
Q ss_pred -----CCCC-------c---------cc---chh-h-h-------hhhhhcccCCCcceEEEEEEEe-----cCCCC
Q 009226 339 -----PGSL-------A---------SS---HQQ-L-Q-------ESFQAFSLSDNKGKVARGICIT-----RSSLK 377 (539)
Q Consensus 339 -----~~l~-------~---------~~---~~~-l-~-------~~~~~l~~~~~~~~vsr~i~I~-----~~~l~ 377 (539)
..+. . ++ .++ | | ..+....++..++..+|..+.+ ++||=
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW 493 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWV 493 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTS
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcc
Confidence 0110 0 00 122 3 4 4444444566788889998888 88863
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.11 E-value=2.4e-10 Score=116.92 Aligned_cols=61 Identities=18% Similarity=0.209 Sum_probs=48.3
Q ss_pred EEeecCC---cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCC--cEEEcCEEEEC
Q 009226 271 LIYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG--QDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG---~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G--~~i~Ad~VI~~ 333 (539)
...|..| ...+.++|.+.++..|++++++++|++|..+ ++..+.|++.+| ++++||.||+.
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~~~~~a~~VV~A 204 (369)
T 3dme_A 139 LVSPSTGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVR--PEGGFELDFGGAEPMTLSCRVLINA 204 (369)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSSEEEEECTTSCEEEEEEEEEEC
T ss_pred eECCCCEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCceEEEEECCCceeEEEeCEEEEC
Confidence 4455555 2578899999999999999999999999876 444356888887 48999999964
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.11 E-value=9.1e-10 Score=116.17 Aligned_cols=61 Identities=21% Similarity=0.202 Sum_probs=52.0
Q ss_pred EEeecC-C---cChHHHHHHHHHHHCCcEEEeCC---cceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIY-G---QGELPQAFCRRAAVKGCLYVLRM---PVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~g-G---~geL~qal~r~~a~~Gg~i~L~~---~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
+..|.. | ...+.++|.+.++..|++|++++ +|++|..+ ++++++|++.+|++++||+||+.
T Consensus 149 ~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~t~~G~~i~Ad~VV~A 216 (438)
T 3dje_A 149 YFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAVTADGKIWRAERTFLC 216 (438)
T ss_dssp EEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEEETTTEEEECSEEEEC
T ss_pred EEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEEECCCCEEECCEEEEC
Confidence 456666 5 35788999999999999999999 99999887 77888899999989999999963
No 36
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.00 E-value=2.1e-10 Score=110.19 Aligned_cols=45 Identities=27% Similarity=0.334 Sum_probs=42.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchh
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIA 67 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~ 67 (539)
+||+|||||++||+||..|+++|++|+||||++.+||++.+...+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~ 47 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD 47 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC
Confidence 899999999999999999999999999999999999999876543
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.99 E-value=3e-09 Score=118.83 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=50.3
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..+|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ ++|++.+|++++||.||+.
T Consensus 406 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~i~Ad~VVlA 468 (676)
T 3ps9_A 406 ITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK--DDC-WLLNFAGDQQATHSVVVLA 468 (676)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred EEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe--CCe-EEEEECCCCEEECCEEEEC
Confidence 55676663 588899999999999999999999999887 555 5888888889999999963
No 38
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.98 E-value=2.5e-09 Score=110.06 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=48.6
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
+++|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ ++|++.+| +++||+||+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-~~V~t~~g-~i~a~~VV~A 204 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV--DGA-WEVRCDAG-SYRAAVLVNA 204 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE--TTE-EEEECSSE-EEEESEEEEC
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe--CCe-EEEEeCCC-EEEcCEEEEC
Confidence 45666663 588899999999999999999999999887 555 67887666 8999999964
No 39
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.95 E-value=1.4e-08 Score=109.54 Aligned_cols=42 Identities=26% Similarity=0.383 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
.++||||||+|++||+||+.|+++|.+|+||||.+..||...
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGATA 81 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcch
Confidence 469999999999999999999999999999999999998753
No 40
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.91 E-value=1.1e-08 Score=108.44 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=51.2
Q ss_pred EEeecCC-cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 271 LIYPIYG-QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~lyp~gG-~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..+|..+ ...+.++|.+.++..|++|+++++|++|..+ ++++++|++.+|++++||.||+
T Consensus 125 ~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~--~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 125 RMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE--NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp EEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTCCEEECSCEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec--CCcEEEEEECCCCEEECCEEEE
Confidence 3577554 4688999999999999999999999999876 6777889988888899999985
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.90 E-value=9.6e-09 Score=114.97 Aligned_cols=60 Identities=17% Similarity=0.175 Sum_probs=49.0
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCc-EEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~-~i~Ad~VI~~ 333 (539)
..+|.+|. ..+.++|.+.++..|++|+++++|++|..+ +++ ++|++.+|+ +++||.||+.
T Consensus 401 ~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~--~~~-v~V~t~~G~~~i~Ad~VVlA 464 (689)
T 3pvc_A 401 IHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI--DSQ-WQLTFGQSQAAKHHATVILA 464 (689)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC--SSS-EEEEEC-CCCCEEESEEEEC
T ss_pred EEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe--CCe-EEEEeCCCcEEEECCEEEEC
Confidence 55676664 588999999999999999999999999886 455 578888887 8999999963
No 42
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.88 E-value=4.1e-08 Score=101.90 Aligned_cols=60 Identities=25% Similarity=0.346 Sum_probs=50.0
Q ss_pred EEeecCCcC---hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQG---ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~g---eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..+|..|.. .+.++|.+.++..|++++++++|++|..+ ++++++|++.+| +++||.||..
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~g-~~~a~~vV~a 225 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD--GEKVTGVKTTRG-TIHAGKVALA 225 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTC-CEEEEEEEEC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe--CCEEEEEEeCCc-eEECCEEEEC
Confidence 556777754 78899999999999999999999999876 667788888777 7999999964
No 43
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.88 E-value=6.4e-09 Score=109.39 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=48.3
Q ss_pred EEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..+|.....++.++|.+.++..|++++++++|++|..+ ++. +.|++.+| +++||.||+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~--~~~-~~V~~~~g-~i~ad~VIl 181 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT--ASG-FRVTTSAG-TVDAASLVV 181 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTE-EEEEETTE-EEEESEEEE
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCE-EEEEECCc-EEEeeEEEE
Confidence 35776566799999999999999999999999999876 443 67887777 899999995
No 44
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.86 E-value=8.7e-08 Score=104.83 Aligned_cols=60 Identities=18% Similarity=0.233 Sum_probs=47.7
Q ss_pred EeecCC---cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeC--CCc--EEEcCEEEE
Q 009226 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA--SGQ--DILSHKLVL 332 (539)
Q Consensus 272 lyp~gG---~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~--~G~--~i~Ad~VI~ 332 (539)
.+|..| ..++.++|.+.++..|++|+++++|++|..+. ++++++|++. +|+ +++||.||+
T Consensus 245 ~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~-~g~v~Gv~~~~~~g~~~~i~a~~VVl 311 (571)
T 1y0p_A 245 HRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD-KGTVKGILVKGMYKGYYWVKADAVIL 311 (571)
T ss_dssp EESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT-TSCEEEEEEEETTTEEEEEECSEEEE
T ss_pred EecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC-CCeEEEEEEEeCCCcEEEEECCeEEE
Confidence 455543 24788999999999999999999999998861 3788888765 676 689999885
No 45
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.85 E-value=5.5e-08 Score=106.30 Aligned_cols=59 Identities=22% Similarity=0.193 Sum_probs=48.0
Q ss_pred EeecCC---cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 009226 272 IYPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (539)
Q Consensus 272 lyp~gG---~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~Ad~VI~ 332 (539)
.+|..| ...+.++|.+.++..|++|+++++|++|..+ + +++++|++. +|+ +++||.||+
T Consensus 240 ~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~--~~g~v~Gv~~~~~~g~~~~i~A~~VVl 306 (566)
T 1qo8_A 240 HRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN--DDHSVVGAVVHGKHTGYYMIGAKSVVL 306 (566)
T ss_dssp EECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC--TTSBEEEEEEEETTTEEEEEEEEEEEE
T ss_pred eecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC--CCCcEEEEEEEeCCCcEEEEEcCEEEE
Confidence 355554 3478899999999999999999999999876 5 888888764 676 689998885
No 46
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.85 E-value=4.3e-08 Score=101.13 Aligned_cols=60 Identities=25% Similarity=0.244 Sum_probs=48.7
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
++.|..|. ..+.++|.+.++..|++++.+++|++|..+ ++++.+|++.+| +++||.||..
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~~~~g-~i~a~~VV~A 200 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVKTNKG-IIKTGIVVNA 200 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEEETTE-EEECSEEEEC
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEEECCc-EEECCEEEEC
Confidence 44565553 478889999999999999999999999876 667777887776 8999999964
No 47
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.78 E-value=2.1e-08 Score=108.78 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=46.4
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..+.++|.+.+...|++|+++++|++|..+ ++++++|++.+|+++.||.||+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~--~~~v~gV~l~~G~~i~Ad~VVlA 272 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME--DGQITGVTLSNGEEIKSRHVVLA 272 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES--SSBEEEEEETTSCEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 467788888888899999999999999876 67788899999999999999964
No 48
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.73 E-value=9.8e-08 Score=109.04 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=49.8
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
+.+|..|. ..+.++|.+.++..|++|+++++|++|..+ ++++++|++.+| +++||+||..
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~--~~~v~~V~t~~G-~i~Ad~VV~A 202 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS--GGRVTGVQTADG-VIPADIVVSC 202 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTE-EEECSEEEEC
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe--CCEEEEEEECCc-EEECCEEEEC
Confidence 55666664 378999999999999999999999999886 677778887666 7999999964
No 49
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.72 E-value=4e-07 Score=99.59 Aligned_cols=58 Identities=24% Similarity=0.325 Sum_probs=46.5
Q ss_pred eecCC---cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCC-CcEEEEEeC--CCc--EEEcCEEEE
Q 009226 273 YPIYG---QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNS-GSYKGVRLA--SGQ--DILSHKLVL 332 (539)
Q Consensus 273 yp~gG---~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~-g~~~gV~l~--~G~--~i~Ad~VI~ 332 (539)
++..| ..++.++|.+.++..|++|+++++|++|..+ + +++++|++. +|+ +++||.||+
T Consensus 246 ~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~--~~g~v~GV~~~~~~G~~~~i~A~~VVl 311 (572)
T 1d4d_A 246 RPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED--ASGKVTGVLVKGEYTGYYVIKADAVVI 311 (572)
T ss_dssp ESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC----CCEEEEEEEETTTEEEEEECSEEEE
T ss_pred ecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC--CCCeEEEEEEEeCCCcEEEEEcCEEEE
Confidence 45444 2478899999999999999999999999876 5 788888765 675 689999995
No 50
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.69 E-value=8.1e-09 Score=106.38 Aligned_cols=41 Identities=27% Similarity=0.412 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
|++|||||||||++||++|..|+++|++|+|+||++.+|..
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~ 42 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSP 42 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCC
Confidence 67899999999999999999999999999999999888764
No 51
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.49 E-value=6.7e-08 Score=97.92 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=38.4
Q ss_pred cccEEEECCChhHHHHHHHHhh--CCCeEEEeccCCCCCCCccc
Q 009226 22 AFDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar--~G~~VlvlE~~~~~GG~~~s 63 (539)
++||+|||+|++||+||.+|++ .|++|+|+|+++++||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 5899999999999999999974 69999999999999997754
No 52
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.47 E-value=9.6e-08 Score=96.49 Aligned_cols=45 Identities=27% Similarity=0.341 Sum_probs=41.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccch
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~ 66 (539)
.+||+|||||++|+++|..|+++|.+|+|+||++.+||++.+...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~ 46 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRS 46 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEec
Confidence 379999999999999999999999999999999999999887543
No 53
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.45 E-value=9.3e-08 Score=95.68 Aligned_cols=41 Identities=22% Similarity=0.199 Sum_probs=35.0
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
.|++|||||||+|.+|++||.+|+|+|++|+++|++. +||.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 4788999999999999999999999999999999975 5554
No 54
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.42 E-value=1.3e-07 Score=95.42 Aligned_cols=57 Identities=9% Similarity=0.056 Sum_probs=40.1
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC----CCCCCCcccc
Q 009226 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN----PFYGSHFSSL 64 (539)
Q Consensus 8 ~~~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~----~~~GG~~~s~ 64 (539)
..++.|+-++..+..+||+|||+|++|+++|..|++.|++|+++|++ ..+||.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 8 HHHSSGLVPRGSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp -------------CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred cccccCCCCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 34444444445556799999999999999999999999999999994 5899987753
No 55
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.37 E-value=2.2e-07 Score=93.12 Aligned_cols=40 Identities=20% Similarity=0.385 Sum_probs=36.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
+|||||||+|.+|++||..|+|.|++|+++|++ .+||.+.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 699999999999999999999999999999985 6787654
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.36 E-value=2.2e-07 Score=96.00 Aligned_cols=42 Identities=26% Similarity=0.403 Sum_probs=38.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
|+++||||||||++|+++|+.|+++|++|+|+|+++..|+..
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~ 43 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCc
Confidence 457999999999999999999999999999999999887633
No 57
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.35 E-value=2.8e-07 Score=94.83 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=47.8
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
+.+|..|. .++.++|.+.++..|++++++++|++|..+ ++++ +|++.+| +++||.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~--~~~~-~v~~~~g-~~~a~~vV~A 214 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD--GEAL-FIKTPSG-DVWANHVVVA 214 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS--SSSE-EEEETTE-EEEEEEEEEC
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE--CCEE-EEEcCCc-eEEcCEEEEC
Confidence 55666664 478899999999999999999999999865 5554 7877666 8999999964
No 58
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.32 E-value=3.6e-06 Score=88.03 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=49.0
Q ss_pred cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009226 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~ 336 (539)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++++|+++.||.||+....
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~v~l~dG~~i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGD--GTKVTGVRMQDGSVIPADIVIVGIGI 249 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEES--SSBEEEEEESSSCEEECSEEEECSCC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECCCC
Confidence 4578888888899999999999999999765 67778899999999999999976443
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.31 E-value=3.3e-07 Score=92.88 Aligned_cols=44 Identities=25% Similarity=0.285 Sum_probs=41.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
|+++||+|||+|++|+++|..|++.|++|+++|+++.+||.|..
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 45689999999999999999999999999999999999998764
No 60
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.30 E-value=8.9e-06 Score=84.74 Aligned_cols=57 Identities=16% Similarity=0.237 Sum_probs=49.2
Q ss_pred cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009226 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~ 336 (539)
..++.+.+.+.++..|.++++++.|++|..+ ++++.+|++++|+++.||.||+....
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~~V~~~dG~~i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE--GDRVTGVVLSDGNTLPCDLVVVGVGV 239 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE--TTEEEEEEETTSCEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec--CCcEEEEEeCCCCEEEcCEEEECcCC
Confidence 4578888889999999999999999999876 67778899999999999999975443
No 61
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.27 E-value=3.1e-07 Score=95.99 Aligned_cols=43 Identities=26% Similarity=0.277 Sum_probs=39.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
|.++||||||+|++|+++|..|++.|.+|+|+|+++.+|+.+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~ 44 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL 44 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcE
Confidence 4579999999999999999999999999999999999887653
No 62
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.27 E-value=4.9e-07 Score=94.21 Aligned_cols=46 Identities=17% Similarity=0.052 Sum_probs=34.8
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 14 ~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
+-++-.++.+||||||||++||++|..|++.|.+|+|+|+++.++.
T Consensus 15 ~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~ 60 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP 60 (407)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC--
T ss_pred CCcccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 3444455679999999999999999999999999999999987653
No 63
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.27 E-value=3.6e-07 Score=97.79 Aligned_cols=53 Identities=21% Similarity=0.275 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p 334 (539)
.++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+..
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vi~A~ 284 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENC-YNVVLTNGQTICADRVMLAT 284 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSS-EEEEETTSCEEEESEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCE-EEEEECCCcEEEcCEEEEee
Confidence 367888888888999999999999999765 444 47888899999999999643
No 64
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.26 E-value=5.7e-07 Score=93.27 Aligned_cols=59 Identities=22% Similarity=0.214 Sum_probs=45.3
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
++.|.+|. ..+.++|.+.+...|++++++++|++|..+ ++. +.|++.+| +++||.||..
T Consensus 142 ~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~--~~~-v~v~t~~g-~i~a~~VV~A 203 (397)
T 2oln_A 142 FLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD--ADG-VSVTTDRG-TYRAGKVVLA 203 (397)
T ss_dssp EEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE--TTE-EEEEESSC-EEEEEEEEEC
T ss_pred EEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc--CCe-EEEEECCC-EEEcCEEEEc
Confidence 44565553 467888999888999999999999999876 444 45766544 7999999853
No 65
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.25 E-value=4e-07 Score=97.56 Aligned_cols=49 Identities=31% Similarity=0.386 Sum_probs=39.1
Q ss_pred CCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 14 PYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 14 ~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.|+..+ .++||+|||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 18 ~~~~~m-~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 18 LYFQSM-MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp ---------CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred cchhhc-ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 344444 4599999999999999999999999999999999999997654
No 66
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.25 E-value=5.3e-07 Score=90.07 Aligned_cols=36 Identities=14% Similarity=0.162 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|||||||+|.+|++||..|+|.|++|+++|++..
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 359999999999999999999999999999999764
No 67
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.23 E-value=5.4e-07 Score=92.16 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=40.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
++..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 456799999999999999999999999999999999999998753
No 68
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.22 E-value=6.9e-07 Score=88.71 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=37.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGSH 60 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~-G~~VlvlE~~~~~GG~ 60 (539)
.++||||||+|++|+.+|..|++. |.+|+|+|+++.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc
Confidence 468999999999999999999997 9999999999999874
No 69
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.21 E-value=4.9e-07 Score=96.25 Aligned_cols=43 Identities=23% Similarity=0.260 Sum_probs=40.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||+|||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 3699999999999999999999999999999999999998764
No 70
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.21 E-value=5.9e-07 Score=90.65 Aligned_cols=44 Identities=20% Similarity=0.344 Sum_probs=40.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+..+||+|||+|++|+++|..|++.|++|+++|+++..||.+..
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 35689999999999999999999999999999999999997753
No 71
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.21 E-value=8.8e-07 Score=92.48 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=37.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCe-EEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~-VlvlE~~~~~GG~~~s 63 (539)
|..+||||||||++||++|..|++.|.+ |+|+|+++.+++....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g 46 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVG 46 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeE
Confidence 4568999999999999999999999999 9999999887654433
No 72
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.21 E-value=7.5e-07 Score=97.17 Aligned_cols=61 Identities=26% Similarity=0.343 Sum_probs=48.8
Q ss_pred EEeecCCc--ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCC---C--cEEEcCEEEEC
Q 009226 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLAS---G--QDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~--geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~---G--~~i~Ad~VI~~ 333 (539)
+.|+.+-. ..+..++.+.++..|++++++++|++|..+ ++++++|++.+ | .+++||.||..
T Consensus 160 ~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~--~g~v~gV~~~d~~tg~~~~i~A~~VV~A 227 (561)
T 3da1_A 160 GIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD--QGKVVGVVAKDRLTDTTHTIYAKKVVNA 227 (561)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEEC
T ss_pred EEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc--CCeEEEEEEEEcCCCceEEEECCEEEEC
Confidence 55665432 578899999999999999999999999987 77788888753 4 46899999853
No 73
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.19 E-value=1.2e-06 Score=97.85 Aligned_cols=60 Identities=15% Similarity=0.191 Sum_probs=47.2
Q ss_pred CCCCCCCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 3 GNESESELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 3 ~~~~~~~~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
|.|.+..|+.+..++ ....+||||||||++|+.||..|++.|++|+++|+++++||.+..
T Consensus 373 g~e~~~~~~~~~~~~-~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 373 GEEWRRGWHPERIRA-KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp TTTTTTCCCSSCCCC-CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred CcccccccCccccCc-ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 445444444333332 345689999999999999999999999999999999999998664
No 74
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.19 E-value=9.2e-07 Score=90.63 Aligned_cols=59 Identities=19% Similarity=0.270 Sum_probs=46.1
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
++.|..|. ..+.++|.+.+...|++++.+++|++|..+ ++. +.|++.+| +++||.||..
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~--~~~-~~v~~~~g-~~~a~~vV~a 199 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD--DDG-VTIETADG-EYQAKKAIVC 199 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSS-EEEEESSC-EEEEEEEEEC
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc--CCE-EEEEECCC-eEEcCEEEEc
Confidence 44555553 478899999999999999999999999875 444 56777666 5999999853
No 75
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.19 E-value=1.7e-06 Score=87.39 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=37.2
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCCc
Q 009226 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~GG~~ 61 (539)
++||+|||+|++|+++|..|++. |++|+++|+++..||..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 46999999999999999999999 99999999999998743
No 76
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.18 E-value=7.8e-07 Score=96.76 Aligned_cols=48 Identities=17% Similarity=0.255 Sum_probs=41.8
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccch
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSI 66 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~ 66 (539)
.+..+||||||||++|+.+|..|++.|++|+++|+++.+||.|.....
T Consensus 18 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~y 65 (549)
T 4ap3_A 18 GTTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRY 65 (549)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC
T ss_pred CCCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC
Confidence 345699999999999999999999999999999999999998764433
No 77
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.17 E-value=1.1e-06 Score=88.19 Aligned_cols=42 Identities=29% Similarity=0.397 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
..+||+|||+|++|+++|..|++.|++|+++|+ ..+||.+..
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 468999999999999999999999999999999 568887653
No 78
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.17 E-value=1.4e-06 Score=92.03 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~~~GG~~~s 63 (539)
..+||+|||||++||++|.+|++.|. +|+++|+++.+||.|..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 46899999999999999999999999 99999999999997754
No 79
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.17 E-value=1.5e-06 Score=88.90 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=35.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.++||||||+|++|+++|+.|+++|++|+|+|++...+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 578999999999999999999999999999999874443
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.15 E-value=8.7e-07 Score=88.94 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=39.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~ 48 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA 48 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh
Confidence 589999999999999999999999999999999999998853
No 81
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.15 E-value=1.6e-06 Score=90.10 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=37.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
+..+||+|||||++||++|..|++.|.+|+|+|+++.++++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 35689999999999999999999999999999999877553
No 82
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.14 E-value=1.4e-06 Score=87.06 Aligned_cols=40 Identities=18% Similarity=0.275 Sum_probs=37.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+||+|||+|++|+++|..|++.|++|+++|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 8988765
No 83
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.14 E-value=1.6e-06 Score=89.37 Aligned_cols=41 Identities=15% Similarity=0.066 Sum_probs=36.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
|..+||||||||++||++|..|++.|.+|+|+|+++..++.
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~ 49 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF 49 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC
Confidence 45689999999999999999999999999999999988754
No 84
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.13 E-value=1.6e-06 Score=93.21 Aligned_cols=52 Identities=19% Similarity=0.097 Sum_probs=43.3
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe---CCCc--EEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~~ 333 (539)
..+.+++.+.++..|++++.+++|++|..+ + ++++|++ .+|+ +++||.||..
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~-~~~~V~~~d~~~G~~~~i~A~~VV~A 205 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE--N-GLWIVEAEDIDTGKKYSWQARGLVNA 205 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--T-TEEEEEEEETTTCCEEEEEESCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--C-CEEEEEEEECCCCCEEEEECCEEEEC
Confidence 478899999999999999999999999876 4 5678876 3676 7899999953
No 85
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.13 E-value=1.7e-06 Score=89.11 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=41.9
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..+.++|.+.++..|++++.+++|++|..+ ++. +.|++.+| +++||.||..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~-~~v~~~~g-~~~a~~vV~A 200 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS--PDS-VKIETANG-SYTADKLIVS 200 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--SSC-EEEEETTE-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec--CCe-EEEEeCCC-EEEeCEEEEe
Confidence 588899999999999999999999999875 444 46776555 7999999964
No 86
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.13 E-value=1.5e-06 Score=90.57 Aligned_cols=53 Identities=15% Similarity=0.171 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~--~i~Ad~VI~ 332 (539)
..+.+.|.+.++..|++++.+++|++|..+. ++..+.|++.+|+ +++||.||.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFG-TDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEETTSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEEEEEEcCCCCEEEEEcCEEEE
Confidence 3556677777777899999999999998762 3444567778888 699999995
No 87
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.13 E-value=1.5e-06 Score=88.32 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=37.2
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCCc
Q 009226 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~GG~~ 61 (539)
++||||||+|++||++|++|++. |++|+++|+++.+||..
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 58999999999999999999997 99999999999998743
No 88
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.13 E-value=1.6e-06 Score=94.19 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=41.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+..+||||||||++|+.+|..|++.|++|+++|+++.+||.|..
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 345799999999999999999999999999999999999998753
No 89
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.12 E-value=1.7e-06 Score=83.23 Aligned_cols=36 Identities=17% Similarity=0.285 Sum_probs=33.3
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
|.++||||||+|++|+.+|..|++.|.+|+++|++.
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 356999999999999999999999999999999984
No 90
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.12 E-value=1.6e-06 Score=92.45 Aligned_cols=41 Identities=22% Similarity=0.239 Sum_probs=37.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
.+|||+|||+|.+|++||..|++.|++|+++|+++..||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 46999999999999999999999999999999998655554
No 91
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.11 E-value=2.2e-06 Score=90.98 Aligned_cols=45 Identities=20% Similarity=0.176 Sum_probs=40.8
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
...+.+||+|||+|++||++|..|++.|++|+++|+++++||.+.
T Consensus 118 ~~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 118 SRELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CSSCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 334678999999999999999999999999999999999999754
No 92
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.10 E-value=2.3e-06 Score=93.78 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=42.6
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeC-CC--cEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SG--QDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~-~G--~~i~Ad~VI~ 332 (539)
..+.+.|.+.++..|++++.+++|++|..+ ++..++|++. +| ++++||.||.
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~--~g~~~~V~~~~~G~~~~i~AdlVV~ 182 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS--DPDRVVLTVRRGGESVTVESDFVID 182 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC--STTCEEEEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEEecCCceEEEEcCEEEE
Confidence 467777888888899999999999999875 5566788876 67 5799999995
No 93
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.10 E-value=1.3e-06 Score=92.92 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=43.6
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEE-eCCCcEEEcCEEEECC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVR-LASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~-l~~G~~i~Ad~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|+ +.+|+ +.||.||+..
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~~g~-i~aD~Vv~a~ 264 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD--ADGRRVATTMKHGE-IVADQVMLAL 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC--TTSCEEEEESSSCE-EEESEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc--CCCEEEEEEcCCCe-EEeCEEEEee
Confidence 477888888899999999999999999765 33335788 88888 9999999643
No 94
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.10 E-value=1.7e-06 Score=90.24 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=41.0
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcce---------EEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVI---------SLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~---------~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
.+.|..|. ..+.++|.+.+...|++++.+++|+ +|..+ ++++ +|++.+| +++||.||..
T Consensus 161 ~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~--~~~v-~v~~~~g-~i~a~~VV~A 231 (405)
T 3c4n_A 161 RVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT--NTHQ-IVVHETR-QIRAGVIIVA 231 (405)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCE-EEEEEEEEEC
T ss_pred EEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee--CCeE-EEEECCc-EEECCEEEEC
Confidence 34555553 4688999999999999999999999 88665 4554 7776555 8999999954
No 95
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.10 E-value=2.2e-06 Score=92.69 Aligned_cols=45 Identities=33% Similarity=0.468 Sum_probs=41.2
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
++..+||||||||.+|+++|..|++.|++|+++|+++.+||.+..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 84 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPH 84 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccc
Confidence 456799999999999999999999999999999999989998653
No 96
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.10 E-value=1.8e-06 Score=86.88 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 4689999999999999999999999999999999 78887654
No 97
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.09 E-value=1.6e-06 Score=91.59 Aligned_cols=60 Identities=18% Similarity=0.298 Sum_probs=47.9
Q ss_pred EEeecCCc---ChHHHHHHHHHHHCCcEEEeCCcceEEEE---------------ecCCCcEEEEEeCCCcEE--EcCEE
Q 009226 271 LIYPIYGQ---GELPQAFCRRAAVKGCLYVLRMPVISLLT---------------DQNSGSYKGVRLASGQDI--LSHKL 330 (539)
Q Consensus 271 ~lyp~gG~---geL~qal~r~~a~~Gg~i~L~~~V~~I~~---------------~~~~g~~~gV~l~~G~~i--~Ad~V 330 (539)
+.+|..|. ..+.++|.+.++..|++++.+++|++|.. + ++++++|++.+| ++ +||.|
T Consensus 170 ~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~--~~~v~~V~t~~g-~i~~~Ad~V 246 (448)
T 3axb_A 170 VLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ--EARASAAVLSDG-TRVEVGEKL 246 (448)
T ss_dssp EEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS--CEEEEEEEETTS-CEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC--CCceEEEEeCCC-EEeecCCEE
Confidence 44555442 37889999999999999999999999987 3 556678888777 68 99999
Q ss_pred EEC
Q 009226 331 VLD 333 (539)
Q Consensus 331 I~~ 333 (539)
|..
T Consensus 247 V~A 249 (448)
T 3axb_A 247 VVA 249 (448)
T ss_dssp EEC
T ss_pred EEC
Confidence 964
No 98
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.09 E-value=1.3e-06 Score=89.20 Aligned_cols=43 Identities=19% Similarity=0.305 Sum_probs=39.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~~~GG~~~s 63 (539)
|.++||+|||||++|+++|..|++.|+ +|+++|+++ +||.+..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 456899999999999999999999999 999999999 9986654
No 99
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.08 E-value=1.7e-06 Score=86.07 Aligned_cols=42 Identities=19% Similarity=0.294 Sum_probs=38.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEE-eccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLH-LDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~Vlv-lE~~~~~GG~~~s 63 (539)
..+||+|||+|++|++||..|++.|++|++ +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 788998754
No 100
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.08 E-value=2.9e-06 Score=88.08 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=35.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
+..+||+|||||++||++|..|++.|++|+|+|+++..
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 45689999999999999999999999999999999874
No 101
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.06 E-value=2.2e-06 Score=86.73 Aligned_cols=45 Identities=20% Similarity=0.273 Sum_probs=39.2
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.++..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 10 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 10 AHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred ccCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 3456799999999999999999999999999999975 78887643
No 102
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.06 E-value=2.4e-06 Score=90.82 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=40.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.++||||||+|.+|+++|..|++.|++|+++|+++.+||.+..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 4689999999999999999999999999999999999998754
No 103
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.04 E-value=1.3e-06 Score=93.11 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=39.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.++||||||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 4699999999999999999999999999999999999997644
No 104
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.04 E-value=2.7e-06 Score=91.88 Aligned_cols=43 Identities=30% Similarity=0.366 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC--------CCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP--------FYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~--------~~GG~~~s 63 (539)
.+|||+|||+|.+|+.||..|++.|++|+++|+++ .+||.|..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 46999999999999999999999999999999975 78997654
No 105
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.04 E-value=2.7e-06 Score=92.44 Aligned_cols=48 Identities=21% Similarity=0.283 Sum_probs=42.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccccchh
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSSLSIA 67 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s~~~~ 67 (539)
+..+||||||||++|+.+|..|++.|++|+++|+++.+||.|.....+
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yP 54 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYP 54 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCC
Confidence 456899999999999999999999999999999999999987644433
No 106
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.03 E-value=1.7e-06 Score=92.23 Aligned_cols=43 Identities=19% Similarity=0.285 Sum_probs=38.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+..+||+|||+|.+|++||..|++.|++|+++|++ .+||.|..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~ 60 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVN 60 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccc
Confidence 35799999999999999999999999999999976 78987644
No 107
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.03 E-value=2.2e-06 Score=93.97 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (539)
.++.++|.+.+...|++|++++.|++|..++ +++++||.. .+|+ +++|+.||+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~-~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQ-DGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECC-CCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 4788999999988999999999999998742 577888875 4676 589999885
No 108
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.03 E-value=2e-06 Score=91.70 Aligned_cols=44 Identities=25% Similarity=0.335 Sum_probs=40.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+.++||||||+|.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLN 47 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccc
Confidence 35699999999999999999999999999999999999998653
No 109
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.03 E-value=2.2e-06 Score=91.22 Aligned_cols=42 Identities=24% Similarity=0.323 Sum_probs=39.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
++||||||||.+|++||..|++.|++|+++|+++.+||.|..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 43 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLN 43 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCC
Confidence 489999999999999999999999999999999999998753
No 110
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.03 E-value=2.7e-06 Score=90.99 Aligned_cols=43 Identities=30% Similarity=0.314 Sum_probs=39.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEecc--------CCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDP--------NPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~--------~~~~GG~~~s 63 (539)
.+|||||||+|.+|++||..|++.|++|+++|+ +..+||.|..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 55 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVN 55 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecc
Confidence 569999999999999999999999999999998 6689997754
No 111
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.03 E-value=2.2e-06 Score=92.93 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=41.9
Q ss_pred CCcccEEEECCChhHHHHHHHHh-hCCCeEEEeccCCCCCCCccccch
Q 009226 20 PTAFDLIVIGTGLPESVISAAAS-ASGKSVLHLDPNPFYGSHFSSLSI 66 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~La-r~G~~VlvlE~~~~~GG~~~s~~~ 66 (539)
+..+||||||||++|+.+|..|+ +.|++|+++|+++.+||.|.....
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~y 53 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRY 53 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCC
Confidence 34689999999999999999999 999999999999999998765433
No 112
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.02 E-value=3.7e-06 Score=91.82 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=33.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
.++||||||||++||++|+.|++.|.+|+|||+++..+
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 46899999999999999999999999999999998765
No 113
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.02 E-value=3.4e-06 Score=93.04 Aligned_cols=42 Identities=14% Similarity=0.237 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
..+||||||+|++|+++|..|++.|++|+++|+.+..||.+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 469999999999999999999999999999999999998553
No 114
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.01 E-value=2.4e-06 Score=90.53 Aligned_cols=42 Identities=26% Similarity=0.333 Sum_probs=39.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+|||||||+|.+|++||..|++.|++|+++|+++.+||.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~ 42 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLR 42 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccce
Confidence 389999999999999999999999999999999999998654
No 115
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.01 E-value=1.9e-06 Score=92.07 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=39.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.++||||||+|.+|+++|..|++.|++|+++|+++.+||.+..
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 4699999999999999999999999999999999999987643
No 116
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.00 E-value=4.7e-06 Score=89.52 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=36.4
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.+.++||+|||||++||++|+.|++.|.+|+|+||++..+.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 34579999999999999999999999999999999987654
No 117
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.00 E-value=4e-06 Score=86.93 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHC-CcEEEeCCcceEEEEecCCCcEE-EEEeCCCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYK-GVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg~i~L~~~V~~I~~~~~~g~~~-gV~l~~G~~i~Ad~VI~ 332 (539)
..+.+.|.+.+... |++++++++|++|..+ +++++ .|++.+|++++||.||.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~--~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD--ERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC--TTSCEEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc--CCceEEEEEECCCCEEECCEEEE
Confidence 35666777777777 8999999999999876 44443 67888899999999995
No 118
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.00 E-value=3.3e-06 Score=92.52 Aligned_cols=40 Identities=15% Similarity=0.257 Sum_probs=37.4
Q ss_pred cccEEEECCChhHHHHHHHHhhC------CCeEEEeccCCCCCCCc
Q 009226 22 AFDLIVIGTGLPESVISAAASAS------GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~------G~~VlvlE~~~~~GG~~ 61 (539)
++||||||||++||++|+.|++. |.+|+|+||++.+|+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 58999999999999999999999 99999999999988753
No 119
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.99 E-value=4.9e-06 Score=89.35 Aligned_cols=41 Identities=17% Similarity=0.202 Sum_probs=37.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
...+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 35689999999999999999999999999999999988754
No 120
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.99 E-value=3.9e-06 Score=90.35 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe--CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL--ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l--~~G~--~i~Ad~VI~ 332 (539)
..+.+.|.+.+...|++++++++|++|..+ ++++.+|++ .+|+ +++||.||.
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~--~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE--GERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE--TTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE--CCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 367777888888899999999999999887 677666655 4574 799999994
No 121
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.98 E-value=4.8e-06 Score=90.98 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=47.3
Q ss_pred EEeecCCc--ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeC---CCc--EEEcCEEEEC
Q 009226 271 LIYPIYGQ--GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVLD 333 (539)
Q Consensus 271 ~lyp~gG~--geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~Ad~VI~~ 333 (539)
+.|+.+.. ..+..++.+.++..|++|+.+++|++|..+ ++++++|++. +|+ +++||.||..
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~--~~~v~gV~~~d~~tg~~~~i~A~~VV~A 245 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE--GDQIVGVKARDLLTDEVIEIKAKLVINT 245 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEBSCEEEC
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe--CCEEEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 55665332 367888888889999999999999999887 6777788753 344 6999999953
No 122
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.98 E-value=2.2e-06 Score=90.71 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeC---CCc--EEEcCEEEE
Q 009226 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA---SGQ--DILSHKLVL 332 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~---~G~--~i~Ad~VI~ 332 (539)
.+.+.|.+.+...|+++++++.|+++..+ ++++++|++. +|+ +++||.||.
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~G~~~~~~ad~VV~ 156 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE--DGYVKGAVLFNRRTNEELTVYSKVVVE 156 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE--CCEEEEEEEEEcCCCceEEEEcCEEEE
Confidence 56677778788899999999999999876 6777667664 676 799999994
No 123
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.98 E-value=2.6e-06 Score=90.53 Aligned_cols=42 Identities=26% Similarity=0.491 Sum_probs=38.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+++||||||||++|+++|..|++.|++|+++|++ .+||.+..
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 4689999999999999999999999999999998 78887643
No 124
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.98 E-value=4e-06 Score=90.98 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=35.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
+.++||||||+|++||+||+.|++ |.+|+||||++..||..
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGST 46 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC---
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCCh
Confidence 346899999999999999999999 99999999999877653
No 125
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.97 E-value=4.4e-06 Score=90.81 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
.++||+|||||++||++|+.|++.|.+|+|+||++..++..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~ 65 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHP 65 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC
Confidence 36899999999999999999999999999999998876543
No 126
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.97 E-value=2.9e-06 Score=85.40 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=39.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEecc----CCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDP----NPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~----~~~~GG~~~s 63 (539)
+..+||+|||+|++|+++|..|++.|++|+++|+ ....||.+..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 4568999999999999999999999999999999 6778887543
No 127
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.97 E-value=3.7e-06 Score=89.41 Aligned_cols=43 Identities=19% Similarity=0.261 Sum_probs=39.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+..+||||||+|.+|+++|..|++.|++|+++|++ .+||.|..
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~ 44 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVN 44 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccC
Confidence 35689999999999999999999999999999998 78987653
No 128
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.97 E-value=3e-06 Score=84.80 Aligned_cols=42 Identities=12% Similarity=0.187 Sum_probs=37.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
|..+||+|||+|++|+++|..|++.|++|+++|++ .+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 45689999999999999999999999999999974 7888654
No 129
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.97 E-value=5.2e-06 Score=82.71 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=36.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~~~GG~~~s 63 (539)
+||+|||+|++|+++|..|++.|+ +|+++|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 68887653
No 130
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.97 E-value=6e-06 Score=89.36 Aligned_cols=39 Identities=23% Similarity=0.361 Sum_probs=36.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.++||||||||++||++|+.|++.|.+|+|+||++..+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~ 42 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP 42 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 468999999999999999999999999999999987653
No 131
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.96 E-value=4.7e-06 Score=89.04 Aligned_cols=55 Identities=7% Similarity=0.135 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCc-----EEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-----DILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~-----~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..+. ++. +.|++.+|+ ++.+|.||+...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~-~~v~~~~~~~~~~~~~~~D~vi~a~G 286 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGK-LLVKYKNVETGEESEDVYDTVLWAIG 286 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSC-EEEEEEETTTCCEEEEEESEEEECSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCc-EEEEEecCCCCceeEEEcCEEEECcc
Confidence 4677888888899999999999999997652 333 356665554 789999997543
No 132
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.96 E-value=3.6e-06 Score=93.32 Aligned_cols=52 Identities=15% Similarity=0.221 Sum_probs=44.0
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (539)
..|.++|.+.+...|++|+.++.|.+|..+ +|++.||.. .+|+ .++|+.||+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ--DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE--TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec--CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 378899999988899999999999999887 788888765 4676 489999985
No 133
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.95 E-value=3.7e-06 Score=89.39 Aligned_cols=52 Identities=13% Similarity=0.089 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCc-EEEcCEEEECC
Q 009226 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQ-DILSHKLVLDP 334 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~-~i~Ad~VI~~p 334 (539)
++.+.+.+.++..|.++++++.|++|..+ ++. +.|++++|+ ++.+|.||+..
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~G~~~i~~D~vv~a~ 260 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERD--AQG-TTLVAQDGTRLEGFDSVIWAV 260 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEE--TTE-EEEEETTCCEEEEESEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCe-EEEEEeCCcEEEEcCEEEECC
Confidence 67788888888999999999999999765 333 578888999 89999999653
No 134
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.95 E-value=3.9e-06 Score=89.99 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=37.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
+|||||||+|.+|++||..|++.|++|+++|++. +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 5999999999999999999999999999999975 999764
No 135
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.95 E-value=5.6e-06 Score=93.10 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=40.7
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
...+||+|||||.+|+.||..|++.|++|+++|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 34689999999999999999999999999999999999998754
No 136
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.95 E-value=3.4e-06 Score=90.10 Aligned_cols=55 Identities=4% Similarity=-0.046 Sum_probs=43.5
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCC-cEEEcCEEEECC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASG-QDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G-~~i~Ad~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|..+. +++.+.|++++| +++.||.||+..
T Consensus 226 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~~v~~~~G~~~i~~D~vv~a~ 281 (479)
T 2hqm_A 226 ECIQNTITDHYVKEGINVHKLSKIVKVEKNV-ETDKLKIHMNDSKSIDDVDELIWTI 281 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECS
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcC-CCcEEEEEECCCcEEEEcCEEEECC
Confidence 3677888888889999999999999997641 333457888889 789999999653
No 137
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.95 E-value=4.8e-06 Score=91.26 Aligned_cols=45 Identities=20% Similarity=0.317 Sum_probs=35.6
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC-CCCC
Q 009226 15 YPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYGS 59 (539)
Q Consensus 15 ~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~-~~GG 59 (539)
..+..+..|||||||||++|+.||.+|++.|.+|+++|++. .+|+
T Consensus 14 ~~~~~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 14 LVPRGSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp ------CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred ccccccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 34445567999999999999999999999999999999985 4554
No 138
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.94 E-value=3.5e-06 Score=85.76 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCC------CeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASG------KSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G------~~VlvlE~~~~~GG 59 (539)
+||||||||++||++|+.|+++| ++|+|||++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 49999999999999999999998 99999999875444
No 139
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.93 E-value=4.8e-06 Score=86.14 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=33.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
++||+|||||++||++|..|++.|.+|+|+|+++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999864
No 140
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.93 E-value=6.1e-06 Score=91.47 Aligned_cols=52 Identities=13% Similarity=0.116 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHC--CcEEEeCCcceEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVK--GCLYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~--Gg~i~L~~~V~~I~~~~~~g---~~~gV~l---~~G~--~i~Ad~VI~ 332 (539)
.++.++|.+.+... |.+|+.++.|.+|.++ ++ +++||.. .+|+ .++|+.||+
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~--~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD--KNTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC--SSSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe--CCccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 47888888888777 9999999999999887 44 8888864 3565 589999985
No 141
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.93 E-value=3.8e-06 Score=88.97 Aligned_cols=53 Identities=8% Similarity=0.073 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009226 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p 334 (539)
++.+.+.+.++..|.++++++.|++|..+ ++..+.|++++|+++.||.||+..
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~~v~~~~g~~i~~D~vv~a~ 261 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN--TDGSLTLELEDGRSETVDCLIWAI 261 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCcEEEEEECCCcEEEcCEEEECC
Confidence 67788888888999999999999999764 333356788899999999999653
No 142
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.92 E-value=7.2e-06 Score=88.08 Aligned_cols=39 Identities=21% Similarity=0.343 Sum_probs=35.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.++||+|||||++||++|+.|++.|.+|+|+|+++..+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999987653
No 143
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.92 E-value=4.9e-06 Score=91.65 Aligned_cols=52 Identities=19% Similarity=0.320 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (539)
.+|.++|.+.+...|.+|+.++.|.+|..+ +|++.||.. .+|+ .++|+.||+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME--NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE--TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478899999888899999999999999887 788888875 4676 689999885
No 144
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.92 E-value=6.9e-06 Score=84.82 Aligned_cols=35 Identities=17% Similarity=0.284 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
.+|+|||||++||++|..|+++|++|+|+||++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 47999999999999999999999999999997643
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.90 E-value=4.3e-06 Score=88.91 Aligned_cols=42 Identities=31% Similarity=0.379 Sum_probs=38.4
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
|.++||||||+|.+|+.||..|++.|++|+++|+++ +||.|.
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 346999999999999999999999999999999998 898764
No 146
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.90 E-value=7.2e-06 Score=87.21 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCe---EEEeccCCCCCCCcccc
Q 009226 23 FDLIVIGTGLPESVISAAASA---SGKS---VLHLDPNPFYGSHFSSL 64 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar---~G~~---VlvlE~~~~~GG~~~s~ 64 (539)
+||+|||||++|++||..|++ .|.+ |+++|+++.+||.|...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~ 50 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYT 50 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecC
Confidence 699999999999999999999 9999 99999999999988753
No 147
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.90 E-value=6.5e-06 Score=81.10 Aligned_cols=38 Identities=21% Similarity=0.314 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
+||+|||+|++|+.+|..|++.|++|+++|+++..|+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~ 40 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRF 40 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccccc
Confidence 89999999999999999999999999999998765543
No 148
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.89 E-value=5.6e-06 Score=88.68 Aligned_cols=54 Identities=13% Similarity=0.121 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p 334 (539)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|++++|+++.||.||+..
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~ 284 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKN--ADGTRHVVFESGAEADYDVVMLAI 284 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCCEEEEEECCCcEEEcCEEEEcc
Confidence 367888888889999999999999999765 333357888899899999999653
No 149
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.88 E-value=1.2e-05 Score=89.54 Aligned_cols=42 Identities=26% Similarity=0.411 Sum_probs=39.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
..+||||||+|.+|+.||..|++.|++|+++|++++.||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 468999999999999999999999999999999999999864
No 150
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.87 E-value=8e-06 Score=84.32 Aligned_cols=36 Identities=17% Similarity=0.195 Sum_probs=33.6
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~G 58 (539)
.||||||||++||++|..|+++ |.+|+|+|+++..+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~ 38 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE 38 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC
Confidence 4899999999999999999999 99999999998763
No 151
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=5.9e-06 Score=87.50 Aligned_cols=40 Identities=20% Similarity=0.257 Sum_probs=37.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
++||||||||.+|++||..|++.|++|+++|++ .+||.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 589999999999999999999999999999998 8898764
No 152
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.86 E-value=6.5e-06 Score=89.17 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
.++++.+.+..+..|..+++++.|+++... ++. +.|.+.+++++.+|.|++.
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~-~~v~~~~~~~~~~D~vLvA 314 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDK-ILVEFSDKTSELYDTVLYA 314 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTE-EEEEETTSCEEEESEEEEC
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec--CCe-EEEEEcCCCeEEEEEEEEc
Confidence 478899999999999999999999999876 444 4677889999999999863
No 153
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.86 E-value=8.6e-06 Score=89.35 Aligned_cols=50 Identities=16% Similarity=0.159 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHH-CCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 280 ELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 280 eL~qal~r~~a~-~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
.+.++|.+.++. .|.++ ++..|+.|..+ ++++++|++.+|+++.||.||+
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e--~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE--NDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES--SSBEEEEEETTSEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec--CCEEEEEEECCCCEEECCEEEE
Confidence 566777777776 57787 68899999876 6777889888888899999885
No 154
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.85 E-value=5.6e-06 Score=87.85 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.++||||||+|.+|+.||..|++.|++|+++|+ +.+||.|..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~ 45 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLN 45 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCC
Confidence 358999999999999999999999999999999 789998763
No 155
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.84 E-value=9.8e-06 Score=88.60 Aligned_cols=52 Identities=12% Similarity=0.185 Sum_probs=42.5
Q ss_pred ChHHHHHHHHHHH-CCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~-~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
..+.++|.+.++. .|.++ ++..|+.|..+ ++++++|.+.+|+++.|+.||+.
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e--~g~V~GV~t~dG~~i~AdaVVLA 175 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVK--NNQVVGVRTNLGVEYKTKAVVVT 175 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEES--SSBEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEec--CCEEEEEEECCCcEEEeCEEEEc
Confidence 3567778777777 48888 68899999876 77888999999999999999853
No 156
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.83 E-value=6.1e-06 Score=88.50 Aligned_cols=55 Identities=9% Similarity=0.137 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..+ ++..+.|++++|+++.||.||+...
T Consensus 235 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~~v~~~~G~~i~~D~vv~a~G 289 (495)
T 2wpf_A 235 ETIREEVTKQLTANGIEIMTNENPAKVSLN--TDGSKHVTFESGKTLDVDVVMMAIG 289 (495)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEC--TTSCEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc--CCceEEEEECCCcEEEcCEEEECCC
Confidence 367888888889999999999999999765 3333578888999999999997543
No 157
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.83 E-value=1.1e-05 Score=80.36 Aligned_cols=39 Identities=15% Similarity=0.382 Sum_probs=35.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
+|||+|||+|++|+++|..|++.|++|+++|+ .+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 48999999999999999999999999999986 5788765
No 158
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.83 E-value=8.2e-06 Score=87.47 Aligned_cols=42 Identities=14% Similarity=0.191 Sum_probs=39.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
..+||||||+|++|+++|..|++. ++|+++|+++++||.+..
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 468999999999999999999999 999999999999998764
No 159
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.83 E-value=1.5e-05 Score=81.95 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=36.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
+||||||+|++|+.||.+|++.|++|+++|+++..+...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~ 42 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHG 42 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCcccc
Confidence 69999999999999999999999999999999866655443
No 160
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.82 E-value=8.9e-06 Score=85.58 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=32.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999986
No 161
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.82 E-value=6.1e-06 Score=88.56 Aligned_cols=51 Identities=10% Similarity=0.121 Sum_probs=42.7
Q ss_pred hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
++.+.+.+.++..|.+++++++|++|..+ +++ +.|++.+|+++.||.||+.
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~-v~v~~~~g~~i~aD~Vv~a 274 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT--GAG-VLVTMTDGRTVEGSHALMT 274 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSS-EEEEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCE-EEEEECCCcEEEcCEEEEC
Confidence 67888888889999999999999999765 444 4677788999999999964
No 162
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.81 E-value=2.2e-05 Score=86.91 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=36.0
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE~~~~~GG 59 (539)
.++||+|||||++||++|+.|++ .|.+|+|+||++..+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~ 70 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME 70 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 9999999999987653
No 163
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.81 E-value=9.1e-06 Score=87.23 Aligned_cols=55 Identities=7% Similarity=0.005 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcE-EEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQD-ILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~-i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..++ ++. +.|++++|++ +.+|.||+...
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~~v~~~~g~~~~~~D~vi~a~G 272 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVS-DKN-LSIHLSDGRIYEHFDHVIYCVG 272 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTC-EEEEETTSCEEEEESEEEECCC
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-Cce-EEEEECCCcEEEECCEEEECCC
Confidence 3678888888899999999999999997641 233 4677889988 99999997543
No 164
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.81 E-value=1.6e-05 Score=86.14 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..+.+.|.+.+...|++++.+ .|++|..+. ++.+++|++.+|++++||.||.
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~ 216 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNN-RGYISNLLTKEGRTLEADLFID 216 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEETTSCEECCSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcC-CCcEEEEEECCCcEEEeCEEEE
Confidence 578888888888899999999 899998752 5566788888898999999994
No 165
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.80 E-value=1.3e-05 Score=87.06 Aligned_cols=38 Identities=29% Similarity=0.434 Sum_probs=34.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
..+||+||||+|.+|+++|.+|+++|++|++||+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 35699999999999999999999999999999998753
No 166
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.79 E-value=1.5e-05 Score=84.89 Aligned_cols=51 Identities=22% Similarity=0.160 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeC-CCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA-SGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~-~G~~i~Ad~VI~ 332 (539)
.++.++|.+.++..|.+++.++.| +|..+ ++++.+|.+. ++.++.||.||+
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~--~~~v~Gv~v~~~~g~~~a~~VVl 170 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK--DGKVTGFVTEKRGLVEDVDKLVL 170 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE--TTEEEEEEETTTEEECCCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe--CCEEEEEEEEeCCCeEEeeeEEE
Confidence 478888988888889999999999 99877 6777787653 334578999985
No 167
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.77 E-value=1.8e-05 Score=72.43 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=32.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
+||+|||+|++|+.+|..|++.|++|+++|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 168
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.76 E-value=1.4e-05 Score=86.18 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE~~~~ 56 (539)
+||+||||+|.+|+++|.+|++ .|++|||||+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 6899999999644
No 169
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.76 E-value=1.2e-05 Score=88.26 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=43.2
Q ss_pred ChHHHHHHHHHHHCC-cEEEeCCcceEEEEecCCCcEEEEEe---CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKG-CLYVLRMPVISLLTDQNSGSYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~G-g~i~L~~~V~~I~~~~~~g~~~gV~l---~~G~--~i~Ad~VI~ 332 (539)
.+|.++|.+.+...| .+++.++.|.+|..+ +++++||.. .+|+ +++|+.||+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~--~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD--DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE--TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe--CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 478889988888888 999999999999887 677777753 5676 689999885
No 170
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.75 E-value=1.4e-05 Score=84.58 Aligned_cols=41 Identities=29% Similarity=0.310 Sum_probs=37.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC-----CeEEEeccCCCCCCCc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASG-----KSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G-----~~VlvlE~~~~~GG~~ 61 (539)
..+||||||+|++|+++|..|++.| .+|+++|+++.+|...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 4689999999999999999999999 9999999999998544
No 171
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.74 E-value=1.7e-05 Score=86.53 Aligned_cols=37 Identities=16% Similarity=0.353 Sum_probs=33.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPF 56 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~~ 56 (539)
..+||+||||+|.+|+++|.+|++.| .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 69999999765
No 172
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.73 E-value=1.6e-05 Score=88.15 Aligned_cols=52 Identities=15% Similarity=0.161 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHHHC-Cc-EEEeCCcceEEEEecCCC---cEEEEEe---CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVK-GC-LYVLRMPVISLLTDQNSG---SYKGVRL---ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg-~i~L~~~V~~I~~~~~~g---~~~gV~l---~~G~--~i~Ad~VI~ 332 (539)
..+...+.+.+... |. +++.++.|.+|..+ ++ +++||.. .+|+ .++|+.||+
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~--~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD--NNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC--TTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc--CCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 35677777777777 99 99999999999886 55 8888764 5666 589999995
No 173
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.68 E-value=2e-05 Score=91.32 Aligned_cols=42 Identities=29% Similarity=0.377 Sum_probs=40.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
..+||||||+|.+|+.||..|++.|++|+++|+++++||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999887
No 174
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.66 E-value=2.9e-05 Score=83.76 Aligned_cols=40 Identities=15% Similarity=0.372 Sum_probs=36.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
..+||+|||||++|++||.+|++.|++|+++|+ +.||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 469999999999999999999999999999996 5788765
No 175
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.66 E-value=3.3e-05 Score=83.84 Aligned_cols=52 Identities=25% Similarity=0.205 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHHHC-CcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..+.+.|.+.++.. |++++++ .|++|..++ ++.+++|++.+|+++.||.||.
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~-~g~~~~v~~~~G~~i~ad~vI~ 246 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDA-NGNIESVRTATGRVFDADLFVD 246 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECT-TSCEEEEEETTSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEECCEEEE
Confidence 46888898888888 9999999 999998752 5667789888998999999995
No 176
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.66 E-value=1.9e-05 Score=83.82 Aligned_cols=43 Identities=14% Similarity=0.121 Sum_probs=38.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-C------CCeEEEeccCCCCCCCcc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASA-S------GKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar-~------G~~VlvlE~~~~~GG~~~ 62 (539)
|..+||+|||+|.+|+.+|..|++ . |.+|+++|+++++||.++
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 346899999999999999999999 7 999999999999998764
No 177
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.65 E-value=1.9e-05 Score=85.57 Aligned_cols=38 Identities=21% Similarity=0.383 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.+||+||||+|.+|+++|.+|++ |.+|+|||+....++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 46999999999999999999999 999999999876543
No 178
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.65 E-value=2.6e-05 Score=83.18 Aligned_cols=53 Identities=8% Similarity=0.078 Sum_probs=41.8
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +++++.||.||+...
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~D~vi~a~G 279 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG---NERVEAVET-DKGTYKADLVLVSVG 279 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE---SSBEEEEEE-TTEEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc---CCcEEEEEE-CCCEEEcCEEEECcC
Confidence 46778888888999999999999999964 345556765 456899999996543
No 179
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.64 E-value=2.7e-05 Score=84.01 Aligned_cols=52 Identities=12% Similarity=0.193 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHHH-CCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~-~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..+.+.|.+.++. .|++++.+ .|++|..+. ++.+++|++.+|++++||.||.
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~-~g~~~~v~~~~g~~i~ad~vV~ 227 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQ-HGDIEKLITKQNGEISGQLFID 227 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecC-CCcEEEEEECCCCEEEcCEEEE
Confidence 4678888888888 89999999 599998752 5566788888888899999994
No 180
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.62 E-value=3.3e-05 Score=81.54 Aligned_cols=42 Identities=10% Similarity=0.097 Sum_probs=35.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCCc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~GG~~ 61 (539)
|+.+||||||+|++|+.+|..|++. |++|+++|++++.|+..
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 3458999999999999999999998 88999999999887543
No 181
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.62 E-value=2.2e-05 Score=84.34 Aligned_cols=52 Identities=21% Similarity=0.230 Sum_probs=44.2
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..+.+.|.+.+...|++++.+ .|++|..++ ++.+++|++.+|++++||.||.
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~-~~~~~~v~~~~g~~~~ad~vV~ 224 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDE-RGWISGVHTKQHGEISGDLFVD 224 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECT-TSCEEEEEESSSCEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcC-CCCEEEEEECCCCEEEcCEEEE
Confidence 477888888888899999999 999998752 5667789888898999999994
No 182
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.60 E-value=3.6e-05 Score=84.21 Aligned_cols=50 Identities=24% Similarity=0.195 Sum_probs=41.7
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
.++.+.+.+.++..|.++++++.|++|..+ ++ +|++++|+++.||.||+.
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~---~v~~~~g~~i~~D~Vi~a 277 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA---VVRLKSGSVIQTDMLILA 277 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT---EEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC---EEEECCCCEEEcCEEEEc
Confidence 477888888889999999999999999643 33 477789999999999964
No 183
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.60 E-value=2.9e-05 Score=82.50 Aligned_cols=55 Identities=11% Similarity=0.132 Sum_probs=45.4
Q ss_pred cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
..++.+.+.+.++..|.+++++++|++|..+ ++++ .|++++|+++.||.||+...
T Consensus 201 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g~~i~aD~Vv~a~G 255 (472)
T 3iwa_A 201 SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKV-ARVITDKRTLDADLVILAAG 255 (472)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBE-EEEEESSCEEECSEEEECSC
T ss_pred CHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeE-EEEEeCCCEEEcCEEEECCC
Confidence 4578888889899999999999999999764 5554 47778999999999997543
No 184
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.60 E-value=3.1e-05 Score=84.91 Aligned_cols=35 Identities=31% Similarity=0.334 Sum_probs=32.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
...+||+|||+|.+|++||..|++.|++|+++|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45699999999999999999999999999999983
No 185
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.59 E-value=3.8e-05 Score=89.49 Aligned_cols=41 Identities=10% Similarity=0.200 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCCCCCc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~~~GG~~ 61 (539)
+.+||+|||+|.+|++||..|++.|+ +|+++|+++++||..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 46899999999999999999999999 799999999999975
No 186
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.58 E-value=4e-05 Score=83.65 Aligned_cols=38 Identities=24% Similarity=0.375 Sum_probs=34.4
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCC
Q 009226 18 IEPTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (539)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~Lar~-G~~VlvlE~~~ 55 (539)
+...+||+||||||.+|+++|.+|+.. |.+|+|||+.+
T Consensus 15 ~~~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 15 VSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred cCCCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 555689999999999999999999975 89999999976
No 187
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.57 E-value=3.7e-05 Score=81.64 Aligned_cols=42 Identities=10% Similarity=-0.034 Sum_probs=38.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCCCCCcc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASG--KSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G--~~VlvlE~~~~~GG~~~ 62 (539)
..+||+|||+|++|+.+|..|++.| ++|+++|+++++||.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999999 99999999999998763
No 188
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.57 E-value=4.7e-05 Score=84.62 Aligned_cols=45 Identities=16% Similarity=0.231 Sum_probs=37.9
Q ss_pred CcccEEEECCChhHHHHHHHHhh-----CCCeEEEeccCCCC--CCCccccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASA-----SGKSVLHLDPNPFY--GSHFSSLS 65 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar-----~G~~VlvlE~~~~~--GG~~~s~~ 65 (539)
.++||+|||||++||++|+.|++ .|.+|+|+|+++.. .|+...+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~ 58 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQ 58 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEC
Confidence 36899999999999999999999 99999999998764 45544443
No 189
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.52 E-value=5.8e-05 Score=81.04 Aligned_cols=39 Identities=23% Similarity=0.335 Sum_probs=35.8
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
+.+||+||||+|.+|+++|.+|++.|++|+++|+....+
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 457999999999999999999999999999999988765
No 190
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.48 E-value=6.1e-05 Score=79.62 Aligned_cols=53 Identities=6% Similarity=0.120 Sum_probs=43.4
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.+++++++|++|..+ ++++ .|++.+| ++.||.||+...
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v-~v~~~~g-~i~aD~Vv~A~G 241 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGI-VLETSEQ-EISCDSGIFALN 241 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCE-EEEESSC-EEEESEEEECSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeE-EEEECCC-EEEeCEEEECcC
Confidence 477888888889999999999999999765 5555 7877666 899999997543
No 191
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.45 E-value=6.3e-05 Score=78.90 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=36.4
Q ss_pred ccEEEECCChhHHHHHHHHhh--CCCeEEEeccCCCCCCCc
Q 009226 23 FDLIVIGTGLPESVISAAASA--SGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar--~G~~VlvlE~~~~~GG~~ 61 (539)
.||||||||++|+++|..|++ .|++|+++|++++.|+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 599999999999999999999 899999999999988754
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.44 E-value=7.5e-05 Score=78.89 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=44.9
Q ss_pred cChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 278 QGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 278 ~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
..++.+.+.+.++..|.+++++++|++|..+ ++++..|.+ +|+++.||.||+...
T Consensus 190 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~~-~g~~i~~D~vv~a~G 244 (452)
T 2cdu_A 190 DKEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKTL-DGKEIKSDIAILCIG 244 (452)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEET-TSCEEEESEEEECCC
T ss_pred hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEEe-CCCEEECCEEEECcC
Confidence 3578888888899999999999999999764 566656765 888999999997543
No 193
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.44 E-value=6.2e-05 Score=81.92 Aligned_cols=38 Identities=29% Similarity=0.426 Sum_probs=34.8
Q ss_pred cccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFYGS 59 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE~~~~~GG 59 (539)
+||+||||+|.+|+++|.+|++ .|++|+|||+.+..++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~ 40 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDEN 40 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccC
Confidence 5999999999999999999999 7999999999877643
No 194
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.43 E-value=0.00011 Score=79.00 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
+.+||+||||+|.+|+++|.+|++.|++|+++|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 35799999999999999999999999999999998654
No 195
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.43 E-value=0.00011 Score=77.18 Aligned_cols=57 Identities=7% Similarity=0.014 Sum_probs=46.3
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..+.+++++.+|++++|+++.||.||+...
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G 247 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIG 247 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 467788888888999999999999999751015666788889999999999997544
No 196
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.36 E-value=0.00011 Score=80.38 Aligned_cols=38 Identities=21% Similarity=0.366 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhh-CCCeEEEeccCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASA-SGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE~~~~~ 57 (539)
+.+||+||||+|.+|+++|.+|++ .|++|++||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 467999999999999999999999 89999999998654
No 197
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.35 E-value=0.0001 Score=78.79 Aligned_cols=53 Identities=9% Similarity=0.140 Sum_probs=42.2
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +|+++.||.||+...
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~---~~~v~~v~~-~g~~i~~D~Vi~a~G 288 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG---NGKVEKIIT-DKNEYDVDMVILAVG 288 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC---SSSCCEEEE-SSCEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc---CCcEEEEEE-CCcEEECCEEEECCC
Confidence 46778888888899999999999999963 344445665 788999999997543
No 198
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.35 E-value=0.00012 Score=78.46 Aligned_cols=53 Identities=17% Similarity=0.164 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
++.+.+.+.++..|.++++++.|++|..+ +++ +.|++++|+++.||.||+...
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~-~~v~l~dG~~i~aD~Vv~a~G 279 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGK-LLIKLKDGRKVETDHIVAAVG 279 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECCC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCe-EEEEECCCCEEECCEEEECCC
Confidence 57788888888999999999999999765 444 478889999999999997543
No 199
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.35 E-value=0.00011 Score=77.49 Aligned_cols=53 Identities=9% Similarity=0.028 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|.. ++++..|.+ +|+++.||.||+...
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~---~~~v~~v~~-~~~~i~~d~vi~a~G 243 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG---DGRVQKVVT-DKNAYDADLVVVAVG 243 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC---SSBCCEEEE-SSCEEECSEEEECSC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc---cCcEEEEEE-CCCEEECCEEEECcC
Confidence 46778888888899999999999999964 344445665 677899999997543
No 200
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.35 E-value=0.00013 Score=75.30 Aligned_cols=54 Identities=17% Similarity=0.079 Sum_probs=44.5
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..+ ++. +.|++++|+++.||.||+...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~-~~v~~~~g~~i~~d~vv~a~G 240 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEG-LEAHLSDGEVIPCDLVVSAVG 240 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTE-EEEEETTSCEEEESEEEECSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCE-EEEEECCCCEEECCEEEECcC
Confidence 367788888888999999999999999765 343 578888999999999997543
No 201
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.34 E-value=0.00014 Score=78.89 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~-G~~VlvlE~~~~~GG 59 (539)
..||+||||+|.+|+++|.+|+++ |++|+|||+.....+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 569999999999999999999998 999999999877643
No 202
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.34 E-value=7.7e-05 Score=77.56 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~ 336 (539)
.++.+.+.+.++..|.++++++.|++|. .+ +|++++|+++.+|.||+.+..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~----~~---~v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR----EH---EIVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC----SS---EEEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC----CC---eEEECCCCEEeeeEEEECCCC
Confidence 3677888888899999999999999984 22 366789999999999975543
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.31 E-value=0.00015 Score=75.60 Aligned_cols=51 Identities=22% Similarity=0.237 Sum_probs=42.1
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPSF 336 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~~ 336 (539)
.++.+.+.+.++..|.++++++.|++|. + + +|++++|+++.||.||+....
T Consensus 187 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~----~v~~~~g~~i~~D~vi~a~G~ 237 (408)
T 2gqw_A 187 ATLADFVARYHAAQGVDLRFERSVTGSV-D--G----VVLLDDGTRIAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T----EEEETTSCEEECSEEEECSCE
T ss_pred HHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C----EEEECCCCEEEcCEEEECcCC
Confidence 3677888888899999999999999996 3 3 567789999999999976443
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.22 E-value=0.00021 Score=73.43 Aligned_cols=47 Identities=19% Similarity=0.164 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECC
Q 009226 280 ELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDP 334 (539)
Q Consensus 280 eL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p 334 (539)
++.+.+.+.++..|.++++++.|++|. .+ +|++++|+ +.+|.||+..
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~----~~---~v~~~~g~-i~~D~vi~a~ 230 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN----EE---GVLTNSGF-IEGKVKICAI 230 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC----SS---EEEETTEE-EECSCEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE----ee---EEEECCCE-EEcCEEEECc
Confidence 677888888889999999999999984 12 46678887 9999999643
No 205
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.19 E-value=0.00019 Score=75.48 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.8
Q ss_pred cccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar---~G~~VlvlE~~~~~ 57 (539)
..||||||||++|+.+|..|++ .|.+|+++|++++.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 4699999999999999999999 89999999999965
No 206
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.14 E-value=0.00031 Score=73.17 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEECCC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLDPS 335 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~p~ 335 (539)
.++.+.+.+.++..|.++++++.|++|..+ +++.+|++++|+++.||.||+...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~---~~~~~v~~~dg~~i~aD~Vv~a~G 238 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGE---GQLEQVMASDGRSFVADSALICVG 238 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECS---SSCCEEEETTSCEEECSEEEECSC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEecc---CcEEEEEECCCCEEEcCEEEEeeC
Confidence 467778888888999999999999999643 355688899999999999997543
No 207
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.13 E-value=0.00013 Score=78.36 Aligned_cols=44 Identities=16% Similarity=0.135 Sum_probs=32.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+.+||||||+|.+||++|++|.++|...+++|+.+..|+.+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~ 80 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKIC 80 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEE
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCccee
Confidence 34599999999999999999999987776666666666665543
No 208
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.12 E-value=0.00027 Score=76.73 Aligned_cols=36 Identities=11% Similarity=0.202 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~G 58 (539)
.||+|||||++|++||..|++. |.+|+++|+++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999998 89999999999987
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=96.87 E-value=0.00059 Score=73.11 Aligned_cols=36 Identities=11% Similarity=0.277 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
++..|||||+|.+|+.+|..|++.|++|+++|++++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 456899999999999999999999999999999986
No 210
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.80 E-value=0.00095 Score=68.97 Aligned_cols=39 Identities=10% Similarity=0.243 Sum_probs=35.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
++..|||||||++|+.||..|++.|.+|+++|++++++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 356899999999999999999888999999999998773
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.79 E-value=0.00071 Score=69.92 Aligned_cols=38 Identities=18% Similarity=0.293 Sum_probs=33.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~~~GG~ 60 (539)
..|||||+|.+|+++|.+|++.|+ +|+++|++++++.+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~ 42 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC 42 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc
Confidence 369999999999999999998874 89999999876544
No 212
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.69 E-value=0.00097 Score=70.10 Aligned_cols=48 Identities=10% Similarity=0.137 Sum_probs=40.0
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
.++.+.+.+..+..|.++++++.|+++. .+ .|++++|+++.+|.||+.
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~----~~---~v~~~~g~~~~~D~vl~a 235 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAIN----GN---EITFKSGKVEHYDMIIEG 235 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEE----TT---EEEETTSCEEECSEEEEC
T ss_pred chhHHHHHHHhhccceEEEeccEEEEec----CC---eeeecCCeEEeeeeEEEE
Confidence 4777888888899999999999999873 22 366789999999999964
No 213
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.44 E-value=0.0016 Score=68.24 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.3
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEeccCCCC
Q 009226 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNPFY 57 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G--~~VlvlE~~~~~ 57 (539)
.|||||||.+|++||..|++.| .+|+++|++++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCC
Confidence 6999999999999999999876 789999999874
No 214
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.31 E-value=0.016 Score=51.23 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|+|+|+|.-|+.+|..|++.|++|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999874
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=95.30 E-value=0.018 Score=60.40 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=35.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..+|+|||+|..|+.+|..|++.|.+|+++|+++++..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999987653
No 216
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.16 E-value=0.019 Score=49.22 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|||+|..|...|..|++.|++|.++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 217
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=95.16 E-value=0.015 Score=59.81 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999988665
No 218
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.95 E-value=0.032 Score=48.46 Aligned_cols=33 Identities=15% Similarity=0.244 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|+|+|.|--|...|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999974
No 219
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.86 E-value=0.03 Score=49.34 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34579999999999999999999999999999963
No 220
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.77 E-value=0.023 Score=56.11 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.++.-.
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~ 182 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRA 182 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCc
Confidence 3799999999999999999999999999999987643
No 221
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.45 E-value=0.028 Score=59.15 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999998865
No 222
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.41 E-value=0.037 Score=47.84 Aligned_cols=33 Identities=30% Similarity=0.488 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|.-|..+|..|++.|++|.++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999863
No 223
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.39 E-value=0.036 Score=56.66 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=36.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
..+++|||+|..|+-+|..|++.|.+|+++|+++++....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 3579999999999999999999999999999999876643
No 224
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.30 E-value=0.62 Score=45.87 Aligned_cols=92 Identities=10% Similarity=0.043 Sum_probs=56.7
Q ss_pred eecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEE-cCEEEE-CCCCCCCCCCcccchhhh
Q 009226 273 YPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDIL-SHKLVL-DPSFTVPGSLASSHQQLQ 350 (539)
Q Consensus 273 yp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~-Ad~VI~-~p~~~~~~l~~~~~~~l~ 350 (539)
....|+..+.+++.+ |.+|+++++|++|..+ ++. +.|++.+|+.+. ||.||+ +|.....++. ...+.++
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~--~~~-~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~-~~~~~l~ 174 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRG--EEH-WNLLDAEGQNHGPFSHVIIATPAPQASTLL-AAAPKLA 174 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEEC--SSC-EEEEETTSCEEEEESEEEECSCHHHHGGGG-TTCHHHH
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEe--CCE-EEEEeCCCcCccccCEEEEcCCHHHHHHhh-ccCHHHH
Confidence 456778888876654 7899999999999876 343 568888888764 899995 3433222221 2233333
Q ss_pred hhhhhcccCCCcceEEEEEEEecCCCC
Q 009226 351 ESFQAFSLSDNKGKVARGICITRSSLK 377 (539)
Q Consensus 351 ~~~~~l~~~~~~~~vsr~i~I~~~~l~ 377 (539)
... ....+..+..+.+.++.++.
T Consensus 175 ~~~----~~~~~~~~~~~~~~~~~~~~ 197 (336)
T 1yvv_A 175 SVV----AGVKMDPTWAVALAFETPLQ 197 (336)
T ss_dssp HHH----TTCCEEEEEEEEEEESSCCS
T ss_pred HHH----hhcCccceeEEEEEecCCCC
Confidence 222 22234445555556777754
No 225
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=94.30 E-value=0.037 Score=58.26 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999988755
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.21 E-value=0.035 Score=56.57 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 5799999999999999999999999999999998766
No 227
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.19 E-value=0.047 Score=57.26 Aligned_cols=38 Identities=26% Similarity=0.196 Sum_probs=35.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 35899999999999999999999999999999988754
No 228
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=94.17 E-value=0.04 Score=58.11 Aligned_cols=38 Identities=24% Similarity=0.316 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999988763
No 229
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.17 E-value=0.039 Score=57.90 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+.+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 5799999999999999999999999999999988654
No 230
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.97 E-value=0.051 Score=49.29 Aligned_cols=36 Identities=19% Similarity=0.280 Sum_probs=32.2
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC-CCeEEEeccCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASAS-GKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~-G~~VlvlE~~~ 55 (539)
+..-.|+|+|+|..|..+|..|.+. |++|+++|++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3345799999999999999999999 99999999874
No 231
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=93.80 E-value=0.048 Score=53.57 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 47999999999999999999999999999987653
No 232
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=93.77 E-value=0.057 Score=55.83 Aligned_cols=38 Identities=24% Similarity=0.355 Sum_probs=35.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 57999999999999999999999999999999987654
No 233
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.75 E-value=0.061 Score=44.38 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~ 55 (539)
..|+|+|+|..|..+|..|.+.| ++|.+++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 46999999999999999999999 9999999863
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.67 E-value=0.055 Score=56.73 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999988654
No 235
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.42 E-value=0.076 Score=52.02 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||+|.-|...|..|+++|++|.++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3469999999999999999999999999999875
No 236
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.39 E-value=0.063 Score=53.70 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|.|||+|.-|.-.|..++++|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 237
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.32 E-value=0.084 Score=55.45 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=39.1
Q ss_pred CCCCCCCCCCCC----CCCC-CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 5 ESESELPVPPYP----PIEP-TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 5 ~~~~~~~~~~~~----~l~~-~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
....+|-.|+-. +..+ .-..|.|||+|.-|...|..|+++|++|+++|+++.
T Consensus 32 ~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 32 SLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 344456666322 2222 224699999999999999999999999999999876
No 238
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.24 E-value=0.12 Score=52.33 Aligned_cols=50 Identities=16% Similarity=0.172 Sum_probs=37.2
Q ss_pred CCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 10 LPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 10 ~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.|+.|-++=.+.++||||||||++|+++|+.|+++|++|+|+|+++..||
T Consensus 5 ~~~~~~~~~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 5 HHHMARIRAMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp ---------CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred hhhHHHhhccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 35555555555679999999999999999999999999999999975554
No 239
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.23 E-value=0.071 Score=56.10 Aligned_cols=37 Identities=14% Similarity=0.068 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc
Confidence 4799999999999999999999999999999988653
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.22 E-value=0.049 Score=57.61 Aligned_cols=38 Identities=24% Similarity=0.320 Sum_probs=35.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..+|+|||+|..|+-+|..|++.|.+|+++|+++++..
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 223 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT 223 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh
Confidence 35799999999999999999999999999999988765
No 241
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.15 E-value=0.082 Score=52.54 Aligned_cols=48 Identities=10% Similarity=0.009 Sum_probs=33.3
Q ss_pred CCCCCCCCC-CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 9 ELPVPPYPP-IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 9 ~~~~~~~~~-l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
+|+.+++.+ .......|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 7 ~~~~~~~~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 7 HHHHSSGLVPRGSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp -----------CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccccccccCcccccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 444443333 333346799999999999999999999999999999763
No 242
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.07 E-value=0.063 Score=53.45 Aligned_cols=49 Identities=20% Similarity=0.123 Sum_probs=31.0
Q ss_pred CCCCCCC-CCCCCCC-CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 7 ESELPVP-PYPPIEP-TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 7 ~~~~~~~-~~~~l~~-~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
|+-|+.+ +|++.+. ....|.|||+|.-|...|..|+++|+ +|.++|++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 7 HSSGVDLGTENLYFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp ------------------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred cccccccCcccccccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 5567766 5665432 34679999999999999999999999 999999973
No 243
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=93.02 E-value=0.085 Score=55.55 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999998765
No 244
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=92.94 E-value=0.093 Score=54.64 Aligned_cols=38 Identities=26% Similarity=0.214 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999887554
No 245
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.93 E-value=0.079 Score=45.37 Aligned_cols=32 Identities=31% Similarity=0.360 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|+|+|+|-.|..+|..|.+.|++|.++|++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999863
No 246
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=92.91 E-value=0.082 Score=56.05 Aligned_cols=37 Identities=22% Similarity=0.229 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 5799999999999999999999999999999988754
No 247
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.84 E-value=0.11 Score=56.04 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 4467999999999999999999999999999998753
No 248
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.83 E-value=0.088 Score=55.29 Aligned_cols=37 Identities=16% Similarity=0.087 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 249
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=92.74 E-value=0.1 Score=55.44 Aligned_cols=39 Identities=18% Similarity=0.112 Sum_probs=35.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
.-.|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 357999999999999999999999999999999987654
No 250
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=92.74 E-value=0.1 Score=56.10 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 45799999999999999999999999999999875
No 251
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.71 E-value=0.077 Score=56.10 Aligned_cols=37 Identities=16% Similarity=0.108 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 5799999999999999999999999999999988754
No 252
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.70 E-value=0.085 Score=53.04 Aligned_cols=36 Identities=11% Similarity=0.048 Sum_probs=29.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|.+|+-+|..|++.|.+|+++++++...
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~ 202 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLN 202 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCC
Confidence 479999999999999999999999999999987654
No 253
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.69 E-value=0.096 Score=53.30 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=32.3
Q ss_pred CCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 16 PPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 16 ~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.++++....|.|||.|.-|...|..|+++|++|.++|++.
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3566677889999999999999999999999999999874
No 254
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=92.68 E-value=0.097 Score=54.05 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 180 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV 180 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch
Confidence 5799999999999999999999999999999988754
No 255
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=92.58 E-value=0.11 Score=54.31 Aligned_cols=38 Identities=21% Similarity=0.219 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 38999999999999999999999999999999887654
No 256
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=92.58 E-value=0.1 Score=51.13 Aligned_cols=36 Identities=14% Similarity=0.083 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++++.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC
Confidence 579999999999999999999999999999998773
No 257
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.54 E-value=0.087 Score=49.29 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|+|+|+|--|...|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999864
No 258
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.49 E-value=0.12 Score=50.92 Aligned_cols=32 Identities=34% Similarity=0.526 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999874
No 259
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.43 E-value=0.081 Score=55.59 Aligned_cols=37 Identities=19% Similarity=0.154 Sum_probs=34.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999988754
No 260
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=92.41 E-value=0.11 Score=55.92 Aligned_cols=37 Identities=27% Similarity=0.334 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
....|+|||+|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 4467999999999999999999999999999998753
No 261
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.41 E-value=0.12 Score=49.52 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=31.6
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.......|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 15 ~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 15 LYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34445679999999999999999999999999999874
No 262
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.31 E-value=0.13 Score=47.85 Aligned_cols=35 Identities=14% Similarity=0.243 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35699999999999999999999999999998865
No 263
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.22 E-value=0.12 Score=52.08 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|.|||+|..|...|..|+++|++|.+++++.
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34579999999999999999999999999999863
No 264
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=92.22 E-value=0.11 Score=54.71 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=34.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc
Confidence 5799999999999999999999999999999988653
No 265
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.20 E-value=0.11 Score=50.76 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
..|+|||+|..|+-+|..|++.|.+|.++++.+++
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 47999999999999999999999999999999887
No 266
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=92.10 E-value=0.22 Score=51.73 Aligned_cols=41 Identities=27% Similarity=0.294 Sum_probs=36.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCC-CeEEEeccCCCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASG-KSVLHLDPNPFYGSH 60 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~~~GG~ 60 (539)
|.++||||||+|++|+++|+.|+++| ++|+|+|+++.+|+.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~g 62 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSG 62 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCCC
Confidence 46799999999999999999999999 999999996666543
No 267
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=92.09 E-value=0.2 Score=54.17 Aligned_cols=44 Identities=27% Similarity=0.357 Sum_probs=39.3
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCcc
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFS 62 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~ 62 (539)
.+.+|||||||||++|+.+|+.|++.|++|+++|+++..||...
T Consensus 15 ~~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS~ 58 (561)
T 3da1_A 15 SEKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTSS 58 (561)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGGG
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCccc
Confidence 34679999999999999999999999999999999987776543
No 268
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.09 E-value=0.12 Score=54.73 Aligned_cols=34 Identities=29% Similarity=0.471 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||+|.-|+..|..|+++|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999864
No 269
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.06 E-value=0.12 Score=54.91 Aligned_cols=37 Identities=8% Similarity=0.020 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc
Confidence 4799999999999999999999999999999988754
No 270
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.05 E-value=0.14 Score=52.57 Aligned_cols=39 Identities=26% Similarity=0.285 Sum_probs=35.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 469999999999999999999999999999999876543
No 271
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=91.94 E-value=0.14 Score=49.76 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.7
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
.|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999998763
No 272
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=91.93 E-value=0.14 Score=51.10 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 469999999999999999999999999999976
No 273
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=91.91 E-value=0.16 Score=52.91 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=34.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~ 185 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL 185 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc
Confidence 37999999999999999999999999999999987543
No 274
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.90 E-value=0.18 Score=53.21 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 275
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.89 E-value=0.12 Score=54.39 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|.+|+-+|..|++.|++|+++++++.+-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 479999999999999999999999999999987653
No 276
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.88 E-value=0.14 Score=50.54 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=31.6
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34579999999999999999999999999999875
No 277
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=91.87 E-value=0.14 Score=53.84 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC
Confidence 5799999999999999999999999999999987654
No 278
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.87 E-value=0.15 Score=51.17 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
...|.|||+|..|...|..|++.|+ +|.++|.+.
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 3579999999999999999999998 999999975
No 279
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.83 E-value=0.16 Score=52.99 Aligned_cols=34 Identities=29% Similarity=0.371 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...+.|||.|..||..|+.||++|++|+.+|-+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3579999999999999999999999999999874
No 280
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=91.80 E-value=0.13 Score=50.79 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|.++++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~ 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC
Confidence 479999999999999999999999999999998763
No 281
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.78 E-value=0.14 Score=51.31 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||+|.-|...|..|+++|++|.++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH
Confidence 3579999999999999999999999999999853
No 282
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=91.76 E-value=0.14 Score=53.71 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=34.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999988764
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=91.75 E-value=0.13 Score=53.67 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=32.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~-VlvlE~~~~~ 57 (539)
.+|+|||+|.+|+-+|..|++.|.+ |+++++++.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 284
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=91.75 E-value=0.15 Score=50.43 Aligned_cols=36 Identities=14% Similarity=0.065 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|.++++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 479999999999999999999999999999998764
No 285
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=91.74 E-value=0.13 Score=51.26 Aligned_cols=41 Identities=15% Similarity=0.243 Sum_probs=31.9
Q ss_pred CCCCCCCcccEEEECCChhHHHHHHHHhhCC----CeEEEeccCC
Q 009226 15 YPPIEPTAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNP 55 (539)
Q Consensus 15 ~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G----~~VlvlE~~~ 55 (539)
-+++++....|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 15 ~~~~~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 15 TENLYFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -------CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CchhccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3566777778999999999999999999999 8999999875
No 286
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=91.74 E-value=0.16 Score=52.38 Aligned_cols=40 Identities=25% Similarity=0.218 Sum_probs=35.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
...|+|||+|..|+-+|..|++.|.+|+++|+.+++-.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~ 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh
Confidence 3479999999999999999999999999999999875543
No 287
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=91.70 E-value=0.14 Score=50.31 Aligned_cols=36 Identities=17% Similarity=0.074 Sum_probs=33.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|.++++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999988763
No 288
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=91.68 E-value=0.32 Score=48.84 Aligned_cols=42 Identities=31% Similarity=0.350 Sum_probs=37.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
++||||||||++|+++|+.|+++|++|+|+|+++..+|...+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~~~~ 43 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSH 43 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSSSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCCCCC
Confidence 489999999999999999999999999999999887665433
No 289
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=91.67 E-value=0.14 Score=51.09 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|.|||+|.-|...|..|+++|++|.++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4699999999999999999999999999998753
No 290
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=91.62 E-value=0.14 Score=53.43 Aligned_cols=37 Identities=19% Similarity=0.150 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++-.
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh
Confidence 4799999999999999999999999999999987654
No 291
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=91.61 E-value=0.14 Score=50.83 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=33.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-+|..|++.|.+|+++++++.+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~ 191 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR 191 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC
Confidence 579999999999999999999999999999998763
No 292
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.61 E-value=0.14 Score=50.75 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|.+.|..|+++|++|.++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999975
No 293
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=91.60 E-value=0.36 Score=49.04 Aligned_cols=38 Identities=24% Similarity=0.502 Sum_probs=35.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
.++||||||||++|+++|+.|+++|++|+||||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999998765
No 294
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.58 E-value=0.16 Score=51.52 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=32.0
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|.|||+|.-|...|..|+++|++|.++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 295
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.51 E-value=0.22 Score=49.02 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=31.2
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIG-aGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|.||| +|.-|...|..|+++|++|.+++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 3699999 999999999999999999999998764
No 296
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.50 E-value=0.15 Score=50.59 Aligned_cols=37 Identities=8% Similarity=0.211 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|.++++.+.+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~ 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc
Confidence 4799999999999999999999999999999987644
No 297
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=91.28 E-value=0.26 Score=51.71 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=35.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
...|+|||+|..|+-+|..|++.|.+|+++++.+++....
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~ 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC
Confidence 3579999999999999999999999999999998876543
No 298
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.26 E-value=0.17 Score=49.67 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 369999999999999999999999999999864
No 299
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=91.21 E-value=0.17 Score=54.47 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.|+|||+|..|+-+|..|++.|.+|+++|+.+++..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch
Confidence 799999999999999999999999999999987654
No 300
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.08 E-value=0.2 Score=52.51 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|.|||.|.+|+++|..|++.|++|.+.|+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 35799999999999999999999999999999763
No 301
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.95 E-value=0.4 Score=51.81 Aligned_cols=39 Identities=26% Similarity=0.433 Sum_probs=36.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..+||||||||++|+.+|+.|++.|++|+|+|+++..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 469999999999999999999999999999999986665
No 302
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.90 E-value=0.18 Score=49.67 Aligned_cols=36 Identities=22% Similarity=0.260 Sum_probs=33.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|..|+-.|..|++.|.+|.++++.+++.
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~ 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC
Confidence 469999999999999999999999999999988764
No 303
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=90.90 E-value=0.19 Score=52.82 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 304
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=90.73 E-value=0.21 Score=52.30 Aligned_cols=35 Identities=29% Similarity=0.360 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...+.|||+|.-|+..|..|+++|++|+++|++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999999999999999999999999999864
No 305
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.73 E-value=0.19 Score=49.40 Aligned_cols=35 Identities=17% Similarity=0.045 Sum_probs=32.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45799999999999999999999999999999864
No 306
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=90.72 E-value=0.15 Score=53.27 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=32.7
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~ 57 (539)
...|+|||+|.+|+-+|..|++. |.+|.++++++.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45799999999999999999999 9999999998653
No 307
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=90.69 E-value=0.24 Score=52.34 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
-.|+|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc
Confidence 47999999999999999999999999999999987653
No 308
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=90.68 E-value=0.23 Score=51.87 Aligned_cols=38 Identities=16% Similarity=-0.001 Sum_probs=34.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..++|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 46999999999999999999999999999999887543
No 309
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=90.66 E-value=0.21 Score=52.53 Aligned_cols=38 Identities=13% Similarity=0.066 Sum_probs=34.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
.-.|+|||+|..|+-+|..|++.|.+|+++++.+++..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 224 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR 224 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc
Confidence 35799999999999999999999999999999888653
No 310
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.66 E-value=0.23 Score=52.50 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=32.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-CC-eEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASAS-GK-SVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~-G~-~VlvlE~~~~ 56 (539)
..|.|||+|.-|+..|..|+++ |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999876
No 311
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.64 E-value=0.21 Score=46.88 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=31.0
Q ss_pred CcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|+|.|| |.-|..+|..|.+.|++|.++.|+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 3457999997 9999999999999999999999874
No 312
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=90.54 E-value=0.21 Score=49.24 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|.++++.+.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~ 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC
Confidence 5699999999999999999999999999999987644
No 313
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.48 E-value=0.2 Score=52.25 Aligned_cols=32 Identities=25% Similarity=0.428 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|..|+..|..|+++|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999864
No 314
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=90.46 E-value=0.55 Score=44.13 Aligned_cols=52 Identities=17% Similarity=0.061 Sum_probs=41.7
Q ss_pred ChHHHHHHHHHHHC-CcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVK-GCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~-Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
.++.+.+.+.++.. |.+++ ++.|++|..+ ++++++|++.+|++++||.||..
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~--~~~v~~v~~~~g~~i~a~~VV~A 120 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE--GNRVVGVRTWEGPPARGEKVVLA 120 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE--TTEEEEEEETTSCCEECSEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe--CCEEEEEEECCCCEEECCEEEEC
Confidence 36677777777776 77777 6899999876 67777888888989999999953
No 315
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=90.43 E-value=0.25 Score=46.70 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=32.6
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
+.....|+|||+|-.|...|..|.++|.+|+|++++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 445678999999999999999999999999999975
No 316
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.35 E-value=0.24 Score=48.86 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
+..|.|||+|.-|...|..|+ +|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 467999999999999999999 999999999875
No 317
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=90.35 E-value=0.44 Score=48.09 Aligned_cols=37 Identities=24% Similarity=0.264 Sum_probs=34.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
++||||||||++|+++|+.|+++|++|+|+|+++..|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 5899999999999999999999999999999988766
No 318
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.31 E-value=0.21 Score=50.08 Aligned_cols=37 Identities=11% Similarity=0.115 Sum_probs=33.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.|+|||+|..|+-+|..|++.|.+|.++++.+.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~ 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC
Confidence 4799999999999999999999999999999987654
No 319
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=90.06 E-value=0.25 Score=52.72 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc
Confidence 57999999999999999999999999999999876543
No 320
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.94 E-value=0.27 Score=49.23 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
+..|.|||+|.-|...|..|+++|++|.+++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 367999999999999999999999999999986
No 321
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=89.92 E-value=0.37 Score=48.69 Aligned_cols=52 Identities=13% Similarity=0.311 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe---CCCcEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL---ASGQDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l---~~G~~i~Ad~VI~ 332 (539)
..+.+.|.+.++..|++++++++|++|..+ ++++.+|++ .++++++||.||.
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~~~~~~~~a~~vV~ 156 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHNNEIVDVRAKMVIA 156 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEETTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEECCeEEEEEcCEEEE
Confidence 467788888888899999999999999887 677767776 3566899999985
No 322
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.85 E-value=0.3 Score=47.20 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=31.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|+|.|||.-|..++..|.+.|++|..+.++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4699999999999999999999999999998754
No 323
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.85 E-value=0.27 Score=48.03 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=31.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|.|||+|.-|...|..|+++|++|.+++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3589999999999999999999999999999754
No 324
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=89.83 E-value=0.19 Score=49.42 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|--|.+.|..|+++|++|.+++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 469999999999999999999999999999874
No 325
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=89.81 E-value=0.27 Score=50.58 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
-.|+|||+|..|+.+|..|...|.+|+++|++..
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4699999999999999999999999999999863
No 326
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.81 E-value=0.16 Score=49.47 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=33.5
Q ss_pred CCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 19 EPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 19 ~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
+.....|+|||+|-.|+..|..|.+.|.+|+|++++..
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 33456799999999999999999999999999998653
No 327
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.80 E-value=0.33 Score=47.99 Aligned_cols=35 Identities=20% Similarity=0.142 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|++.|++|.+++++..
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36799999999999999999999999999998753
No 328
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.78 E-value=0.15 Score=48.42 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.6
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
...|.|||+|.-|...|..|+++|++|..+++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 357999999999999999999999999999985
No 329
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=89.75 E-value=0.24 Score=53.81 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
-.|+|||+|..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999987
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=89.74 E-value=0.18 Score=52.63 Aligned_cols=35 Identities=20% Similarity=0.161 Sum_probs=32.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
..|.|||.|.+|+++|..|++.|++|.+.|.++..
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46999999999999999999999999999998765
No 331
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=89.74 E-value=0.3 Score=52.83 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=34.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..|+|||+|..|+-+|..|++.|.+|+++|+.+++...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 47999999999999999999999999999999887654
No 332
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.73 E-value=0.3 Score=45.62 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 333
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.67 E-value=0.31 Score=48.53 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999874
No 334
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=89.64 E-value=0.34 Score=50.82 Aligned_cols=37 Identities=22% Similarity=0.164 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-.|..|++.|.+|+++|+.+++..
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc
Confidence 5799999999999999999999999999999988754
No 335
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.54 E-value=0.37 Score=47.95 Aligned_cols=33 Identities=21% Similarity=0.439 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|+ +|.++|+++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999976
No 336
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=89.53 E-value=0.72 Score=48.80 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar---~G~~VlvlE~~~~ 56 (539)
+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 699999999999999999999 9999999999864
No 337
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=89.50 E-value=0.3 Score=48.57 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999975
No 338
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=89.46 E-value=0.3 Score=48.63 Aligned_cols=34 Identities=15% Similarity=0.401 Sum_probs=29.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|.|||+|.-|...|..|+++|++|.++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3457999999999999999999999999999 654
No 339
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.43 E-value=0.3 Score=48.36 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999874
No 340
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.41 E-value=0.29 Score=47.73 Aligned_cols=37 Identities=16% Similarity=0.090 Sum_probs=34.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|.++++++++..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 5799999999999999999999999999999988755
No 341
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=89.39 E-value=0.24 Score=52.98 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=33.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYG 58 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~G 58 (539)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999998875
No 342
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=89.33 E-value=0.37 Score=50.99 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=35.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSH 60 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~ 60 (539)
..++|||+|..|+-.|..|++.|.+|+++|+.+++...
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc
Confidence 57999999999999999999999999999999987653
No 343
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=89.32 E-value=0.73 Score=49.41 Aligned_cols=36 Identities=8% Similarity=0.165 Sum_probs=33.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar---~G~~VlvlE~~~~ 56 (539)
..+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999999 9999999999754
No 344
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.17 E-value=0.2 Score=52.75 Aligned_cols=34 Identities=15% Similarity=0.365 Sum_probs=31.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.+.|||+|+|-.|...|..|+..|++|+++|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999974
No 345
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.16 E-value=0.2 Score=46.92 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEE-eccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLH-LDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~Vlv-lE~~~ 55 (539)
...|.|||+|.-|...|..|+++|++|.+ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 45799999999999999999999999999 88864
No 346
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=89.06 E-value=0.38 Score=48.47 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||.|.-|...|..|+++|++|.++|+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999885
No 347
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=89.03 E-value=0.32 Score=50.58 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=30.7
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|.|||+|.-|+..|..|++ |++|+++|++..
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3579999999999999999998 999999998753
No 348
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.99 E-value=0.32 Score=51.46 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
|.+.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456789999999999999999999999999999863
No 349
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=88.98 E-value=0.35 Score=44.66 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=29.6
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIG-aGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.||| +|..|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 489999 99999999999999999999999863
No 350
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=88.89 E-value=0.41 Score=47.25 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||.|.-|...|..|+++|++|.++|++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 351
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.84 E-value=0.36 Score=51.09 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 352
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=88.83 E-value=0.19 Score=43.52 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|.+|.+++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 469999999999999999999999999999863
No 353
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=88.76 E-value=0.73 Score=47.95 Aligned_cols=37 Identities=27% Similarity=0.541 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
.++||||||||++||++|..|+++|.+|+|+|+++..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3689999999999999999999999999999998764
No 354
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=88.57 E-value=0.29 Score=50.02 Aligned_cols=33 Identities=24% Similarity=0.317 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|+|||+|..|+.+|..|...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999885
No 355
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.52 E-value=0.43 Score=47.81 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|+ +|.++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999975
No 356
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=88.52 E-value=0.37 Score=46.83 Aligned_cols=35 Identities=9% Similarity=0.060 Sum_probs=33.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
..|+|||+|..|+-+|..|++.|.+|.++++++++
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 47999999999999999999999999999999876
No 357
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.49 E-value=0.29 Score=47.82 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
.|.|||+|.-|...|..|+++|++|.++|++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 589999999999999999999999999999864
No 358
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=88.47 E-value=0.5 Score=49.53 Aligned_cols=36 Identities=22% Similarity=0.129 Sum_probs=32.3
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~~~ 57 (539)
..+|+|||+|..|+-+|..+.+.|. +|++++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3579999999999999999999997 59999998765
No 359
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.47 E-value=0.38 Score=47.14 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=34.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|.++++.+++.+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~ 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc
Confidence 4799999999999999999999999999999988744
No 360
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.47 E-value=0.32 Score=49.24 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=30.2
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 361
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.45 E-value=0.35 Score=50.32 Aligned_cols=33 Identities=30% Similarity=0.301 Sum_probs=30.6
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..-|||.|.-|+..|..|+++|++|+++|++..
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 578999999999999999999999999999854
No 362
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.41 E-value=0.24 Score=49.79 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=32.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCC-------CeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G-------~~VlvlE~~~~ 56 (539)
...|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 357999999999999999999999 99999999876
No 363
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=88.39 E-value=0.3 Score=48.54 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=28.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEecc
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~ 53 (539)
.|.|||+|.-|...|..|+++|++|.++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 489999999999999999999999999998
No 364
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.35 E-value=0.67 Score=47.10 Aligned_cols=37 Identities=14% Similarity=0.297 Sum_probs=34.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
.++||||||||++|+++|..|+++|.+|+|+|+++..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998765
No 365
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.33 E-value=0.42 Score=50.51 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=32.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999875
No 366
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.31 E-value=0.38 Score=45.99 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=32.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCC----CeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASG----KSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G----~~VlvlE~~~~ 56 (539)
....|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 3457999999999999999999999 79999998865
No 367
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.22 E-value=0.48 Score=47.32 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|..+|..|+..|. +|.++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 368
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=88.18 E-value=0.35 Score=49.84 Aligned_cols=31 Identities=23% Similarity=0.264 Sum_probs=29.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|..|+..|..|++ |++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 369
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.16 E-value=0.41 Score=49.55 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|||||.|-.|..+|..|.+.|++|+++|++..
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4699999999999999999999999999999853
No 370
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=88.09 E-value=1 Score=47.52 Aligned_cols=43 Identities=28% Similarity=0.333 Sum_probs=38.6
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEec--------cCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE--------~~~~~GG~~~s 63 (539)
.+|||||||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~ 53 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVN 53 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccC
Confidence 46899999999999999999999 999999999 46788997654
No 371
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=88.09 E-value=0.43 Score=47.21 Aligned_cols=32 Identities=16% Similarity=0.082 Sum_probs=29.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|--|.+.|..|+ +|.+|.++++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 46999999999999999999 999999999875
No 372
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=88.08 E-value=0.43 Score=47.19 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+..|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 373
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=88.01 E-value=0.97 Score=47.29 Aligned_cols=37 Identities=14% Similarity=0.048 Sum_probs=31.3
Q ss_pred cccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~G 58 (539)
..||||||||++|++||..|++. |++|+++|++++.|
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47999999999999999999999 99999999999875
No 374
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=87.98 E-value=1.1 Score=47.36 Aligned_cols=43 Identities=33% Similarity=0.364 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhh-CCCeEEEec--------cCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASA-SGKSVLHLD--------PNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE--------~~~~~GG~~~s 63 (539)
.++||||||||.+|++||..|++ .|++|+++| +++.+||.|..
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~ 57 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVN 57 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHH
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeec
Confidence 46999999999999999999999 999999999 46788997654
No 375
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.94 E-value=0.5 Score=47.02 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=31.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~ 54 (539)
|....|.|||+|..|..+|..|++.|. +|.++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 444679999999999999999999999 99999997
No 376
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=87.75 E-value=0.57 Score=46.37 Aligned_cols=42 Identities=14% Similarity=0.140 Sum_probs=33.8
Q ss_pred CCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 14 PYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 14 ~~~~l~~~~~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
+.++-......|+|.|| |.-|..+|..|++.|++|.+++++.
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 44444445567999997 9999999999999999999999864
No 377
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=87.66 E-value=0.79 Score=46.81 Aligned_cols=37 Identities=27% Similarity=0.412 Sum_probs=34.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
.++||||||||++||++|+.|++.|++|+|+|+++..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~ 40 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFP 40 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 4589999999999999999999999999999998754
No 378
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=87.60 E-value=0.62 Score=49.09 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=31.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
-.|+|||+|..|+-.|..|++.|.+|+++++...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 219 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP 219 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc
Confidence 4699999999999999999999999999998653
No 379
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.55 E-value=0.42 Score=50.34 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~ 55 (539)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999864
No 380
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.54 E-value=0.45 Score=46.66 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.++|++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 469999999999999999999999999999874
No 381
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.53 E-value=0.48 Score=46.30 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999864
No 382
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=87.45 E-value=1.1 Score=48.50 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=43.8
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeC------CC---------cEEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLA------SG---------QDILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~------~G---------~~i~Ad~VI~ 332 (539)
+.+.+.|.+.++..|++|++++.|++|..++ ++++++|++. +| .+++||.||.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~-~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~ 211 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHE-DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIF 211 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECT-TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEE
Confidence 4788888888888999999999999998762 4677788775 33 6899999995
No 383
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=87.39 E-value=0.67 Score=49.37 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|+|||+|..|+-.|..|++.|.+|+++++..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 243 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 243 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc
Confidence 469999999999999999999999999999853
No 384
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=87.18 E-value=0.53 Score=46.63 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=29.6
Q ss_pred cEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|++. |++|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999996 89999999985
No 385
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=87.15 E-value=1.1 Score=47.02 Aligned_cols=42 Identities=31% Similarity=0.296 Sum_probs=38.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||||||||++|++||..|++.|++|+++|+ +.+||.+..
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 479999999999999999999999999999999 789997654
No 386
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=87.14 E-value=0.37 Score=47.44 Aligned_cols=31 Identities=19% Similarity=0.204 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC-----C-CeEEEecc
Q 009226 23 FDLIVIGTGLPESVISAAASAS-----G-KSVLHLDP 53 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~-----G-~~VlvlE~ 53 (539)
..|.|||+|.-|...|..|+++ | ++|.++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 387
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=87.11 E-value=0.67 Score=44.90 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|++.|.+|.+++|+.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 469999999999999999999999999998863
No 388
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.06 E-value=0.55 Score=45.36 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 48999999999999999999999999999874
No 389
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=87.04 E-value=1.3 Score=46.64 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=35.5
Q ss_pred CCcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYG 58 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~G 58 (539)
+..+||||||+|++|+.||..|++. |.+|+++|++++.|
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4579999999999999999999887 89999999998765
No 390
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=87.01 E-value=0.5 Score=45.48 Aligned_cols=33 Identities=9% Similarity=-0.088 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|+|||+|..|+-+|..|++.| +|.++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 57999999999999999999999 9999998776
No 391
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.01 E-value=0.52 Score=49.84 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~ 55 (539)
..|.|||+|..|+..|..|+++ |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999999863
No 392
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=86.98 E-value=0.54 Score=47.42 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=30.5
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
.|+|+|+|..|..+|.++.+.|++|.++|+++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 489999999999999999999999999998754
No 393
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.94 E-value=0.55 Score=46.84 Aligned_cols=34 Identities=24% Similarity=0.237 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHH-HHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESV-ISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~-aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|.|||.|-+|+. +|..|.+.|++|.+.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 36999999999996 78889999999999999865
No 394
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=86.87 E-value=0.5 Score=48.70 Aligned_cols=33 Identities=30% Similarity=0.457 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|+|||+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999999999999875
No 395
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=86.86 E-value=0.63 Score=49.98 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=33.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-.++|||+|..|+-.|..+++-|.+|+++++...+-+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~ 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc
Confidence 5799999999999999999999999999998765533
No 396
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=86.80 E-value=0.49 Score=47.06 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=31.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++| ++|.++|++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46999999999999999999999 9999999985
No 397
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.78 E-value=0.56 Score=45.70 Aligned_cols=32 Identities=19% Similarity=0.209 Sum_probs=29.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999875
No 398
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.73 E-value=0.59 Score=49.27 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=31.4
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999863
No 399
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=86.69 E-value=1.5 Score=38.87 Aligned_cols=50 Identities=20% Similarity=0.074 Sum_probs=40.9
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEeCCCcEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRLASGQDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~~G~~i~Ad~VI~~ 333 (539)
.++.+.+.+.++..|.+++++ +|++|..+ ++. +.|++++| ++.||.||..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~--~~~-~~v~~~~g-~i~ad~vI~A 105 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM--GGV-FEVETEEG-VEKAERLLLC 105 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC--SSS-EEEECSSC-EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc--CCE-EEEEECCC-EEEECEEEEC
Confidence 477888888888999999999 99999765 333 56777777 8999999964
No 400
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=86.63 E-value=0.5 Score=45.17 Aligned_cols=32 Identities=9% Similarity=0.240 Sum_probs=29.7
Q ss_pred cEEEECCChhHHHHHHHHhhCC-CeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G-~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 4899999999999999999999 9999999874
No 401
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=86.43 E-value=0.34 Score=49.71 Aligned_cols=40 Identities=25% Similarity=0.391 Sum_probs=35.9
Q ss_pred CcccEEEECCChhHHHHHHHHhhC--CCeEEEeccCCCCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASAS--GKSVLHLDPNPFYGSH 60 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~~~GG~ 60 (539)
.++||||||+|++|+++|+.|+++ |++|+|||+++..+|.
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~ 76 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEE 76 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTT
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcc
Confidence 359999999999999999999999 9999999998765553
No 402
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=86.42 E-value=1.4 Score=47.06 Aligned_cols=37 Identities=5% Similarity=0.170 Sum_probs=34.0
Q ss_pred CcccEEEECCChhHHHHHHHHhh---CCCeEEEeccCCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASA---SGKSVLHLDPNPFY 57 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar---~G~~VlvlE~~~~~ 57 (539)
..+||||||||++|+++|+.|++ .|.+|+|+|+.+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~ 43 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIP 43 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCC
Confidence 46899999999999999999999 99999999997643
No 403
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=86.34 E-value=1.2 Score=46.39 Aligned_cols=42 Identities=31% Similarity=0.317 Sum_probs=38.4
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCccc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~~s 63 (539)
.+|||+|||+|++|+++|..|++.|++|+++|+ +.+||.+..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 45 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVI 45 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccc
Confidence 369999999999999999999999999999999 789997643
No 404
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.28 E-value=0.59 Score=45.03 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|.|||.-|...+.+|.++|++|..+.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 469999999999999999999999999999865
No 405
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=86.21 E-value=0.55 Score=49.26 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHh--------------------hCCC-eEEEeccCCCC
Q 009226 23 FDLIVIGTGLPESVISAAAS--------------------ASGK-SVLHLDPNPFY 57 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~La--------------------r~G~-~VlvlE~~~~~ 57 (539)
-.|+|||+|..|+-+|..|+ +.|. +|.++++++..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 57999999999999999999 6787 79999997653
No 406
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=86.19 E-value=1.4 Score=46.66 Aligned_cols=40 Identities=38% Similarity=0.464 Sum_probs=35.0
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
|+.+||||||||++|+++|+.|++.|++|+++|+++..+|
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 3569999999999999999999999999999999875443
No 407
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=86.15 E-value=0.55 Score=44.98 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=29.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~ 54 (539)
..|+|||+|-.|+.+|..|+++|. +++++|+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 579999999999999999999996 89999985
No 408
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.10 E-value=0.71 Score=42.34 Aligned_cols=32 Identities=31% Similarity=0.364 Sum_probs=29.3
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIG-aGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|+|.| +|..|..++..|.++|++|.++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 489999 59999999999999999999999874
No 409
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=86.04 E-value=0.64 Score=47.53 Aligned_cols=33 Identities=24% Similarity=0.308 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|+|+|+|-.|+.+|..|...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 410
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=85.92 E-value=0.73 Score=44.89 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC---eEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGK---SVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~---~VlvlE~~~ 55 (539)
...|.|||+|.-|...|..|+++|+ +|.++|++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3569999999999999999999999 999999875
No 411
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.87 E-value=0.74 Score=45.96 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=32.1
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
|....|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 344679999999999999999999999 999999976
No 412
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=85.83 E-value=0.88 Score=47.79 Aligned_cols=33 Identities=12% Similarity=0.024 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI 220 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999854
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=85.80 E-value=0.66 Score=45.26 Aligned_cols=33 Identities=27% Similarity=0.366 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|++.|++|.++|++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999999999999999874
No 414
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=85.78 E-value=0.34 Score=45.67 Aligned_cols=32 Identities=6% Similarity=-0.030 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|..|...|..|.+.|+ |+++|++.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 469999999999999999999999 99999874
No 415
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=85.78 E-value=0.68 Score=48.93 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 416
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.78 E-value=0.78 Score=41.46 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.2
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|.|+ |.-|..++..|.+.|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 46999998 9999999999999999999999864
No 417
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=85.73 E-value=0.56 Score=52.23 Aligned_cols=33 Identities=30% Similarity=0.287 Sum_probs=30.9
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 418
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=85.65 E-value=0.69 Score=49.10 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=31.0
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 419
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.60 E-value=0.68 Score=45.03 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+ |.-|...|..|+++|++|.+++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 36999999 9999999999999999999999864
No 420
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.55 E-value=0.71 Score=44.65 Aligned_cols=32 Identities=22% Similarity=0.480 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|+++|+ +|.++|++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 58999999999999999999999 999999874
No 421
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=85.52 E-value=1.6 Score=44.80 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=46.2
Q ss_pred EEeecCCcChHHHHHHHHHHHCCcEEEeCCcceEEEEecC--CCcEEEEEeCCCcEEEcCEEEE
Q 009226 271 LIYPIYGQGELPQAFCRRAAVKGCLYVLRMPVISLLTDQN--SGSYKGVRLASGQDILSHKLVL 332 (539)
Q Consensus 271 ~lyp~gG~geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~--~g~~~gV~l~~G~~i~Ad~VI~ 332 (539)
..||.....++.++|.+.++..|++++++++|++|..+++ +++ +.|++.+| +++||.||+
T Consensus 101 ~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 101 QLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp EEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred EEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 3577654568899999999999999999999999976410 133 56777665 799999995
No 422
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=85.41 E-value=1.1 Score=43.80 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=29.6
Q ss_pred CcccEEEECCC---hhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTG---LPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaG---l~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...-|+|.|++ --|..+|..|++.|.+|.+++++.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34568999985 678999999999999999999874
No 423
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=85.40 E-value=0.61 Score=46.43 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++|+ +|.++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 424
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.38 E-value=0.7 Score=46.83 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
-.|+|+|+|-.|+.+|..|...|.+|.+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 425
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=85.29 E-value=1.8 Score=45.96 Aligned_cols=36 Identities=11% Similarity=0.255 Sum_probs=33.4
Q ss_pred CcccEEEECCChhHHHHHHHHhh------------CCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASA------------SGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar------------~G~~VlvlE~~~~ 56 (539)
..+||||||||++|+++|+.|++ .|.+|+|+|+++.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 35899999999999999999999 9999999999764
No 426
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.24 E-value=0.71 Score=46.90 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|+.+|..|+..|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999874
No 427
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=85.16 E-value=0.88 Score=45.35 Aligned_cols=35 Identities=14% Similarity=0.172 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
....|.|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 34579999999999999999999998 999999976
No 428
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.03 E-value=0.73 Score=48.65 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999863
No 429
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=85.01 E-value=0.77 Score=46.06 Aligned_cols=33 Identities=18% Similarity=0.091 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|++.|++|.+.++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 359999999999999999999999999999875
No 430
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=84.99 E-value=0.83 Score=42.07 Aligned_cols=32 Identities=34% Similarity=0.529 Sum_probs=29.3
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|+|.|| |.-|..++..|.++|++|.++.|+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4899997 9999999999999999999998863
No 431
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=84.96 E-value=1.4 Score=46.63 Aligned_cols=38 Identities=39% Similarity=0.621 Sum_probs=34.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
+.++||||||||++||++|+.|++.|++|+|+|+++..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 34699999999999999999999999999999999854
No 432
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=84.92 E-value=1.5 Score=42.67 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 10 ~~~~~~~~l~~~~~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
++.|..+...+...-|+|.|+ |--|..+|..|++.|++|.+++++.
T Consensus 14 ~~~~~~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 14 LQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp CCSCCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCCCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 444444444455556888875 6789999999999999999998864
No 433
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=84.90 E-value=0.91 Score=44.07 Aligned_cols=34 Identities=21% Similarity=0.290 Sum_probs=30.7
Q ss_pred cEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 24 DLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 24 DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
.|+|.|| |+-|...+.+|.++|++|.++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 4899997 999999999999999999999887644
No 434
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.80 E-value=0.88 Score=44.17 Aligned_cols=34 Identities=15% Similarity=0.282 Sum_probs=31.0
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|+|||+|-+|..+|.+|++.|.+|.|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998874
No 435
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=84.60 E-value=0.53 Score=47.82 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCC-------CeEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASG-------KSVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G-------~~VlvlE~~~~ 56 (539)
.|.|||+|.-|...|..|+++| ++|.+++++..
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999998765
No 436
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=84.58 E-value=0.75 Score=44.58 Aligned_cols=33 Identities=6% Similarity=0.139 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|++.|.+|.++.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 469999999999999999999999999999863
No 437
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=84.54 E-value=1.8 Score=47.10 Aligned_cols=38 Identities=29% Similarity=0.364 Sum_probs=34.5
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC-CCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP-FYG 58 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~-~~G 58 (539)
.+|||||||||++|+.||++|++.|.+|+++|++. .+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG 64 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIG 64 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccC
Confidence 46999999999999999999999999999999984 444
No 438
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=84.38 E-value=1.8 Score=46.89 Aligned_cols=42 Identities=29% Similarity=0.244 Sum_probs=37.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
+.++||||||+|++||+||+.|+++|.+|+||||++..||..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s 46 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHT 46 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcc
Confidence 346899999999999999999999999999999998876643
No 439
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.35 E-value=0.73 Score=44.18 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=30.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCe-EEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKS-VLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~-VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4699999999999999999999999 99999864
No 440
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=84.33 E-value=0.69 Score=51.57 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=32.8
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIG--aGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799998 99999999999999999999999988 543
No 441
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.30 E-value=0.91 Score=44.94 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
..|.|||+|..|...|..|+..|. +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 469999999999999999999997 999999874
No 442
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=84.28 E-value=0.77 Score=44.44 Aligned_cols=31 Identities=13% Similarity=0.082 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|++ |++|.+++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 58999999999999999999 99999999875
No 443
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=84.27 E-value=0.52 Score=48.41 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=27.9
Q ss_pred ccEEEECCChhHHHHHHHHhh-CCCeEEEec
Q 009226 23 FDLIVIGTGLPESVISAAASA-SGKSVLHLD 52 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar-~G~~VlvlE 52 (539)
..|.|||+|.-|...|..|++ +|++|.+++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 369999999999999999998 599999999
No 444
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.22 E-value=0.73 Score=45.52 Aligned_cols=32 Identities=22% Similarity=0.378 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCC--CeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASG--KSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G--~~VlvlE~~~ 55 (539)
.|.|||+|..|...|..|+++| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 5999999999999999999999 7999999874
No 445
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=84.17 E-value=1.2 Score=48.16 Aligned_cols=42 Identities=21% Similarity=0.204 Sum_probs=37.0
Q ss_pred CCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 18 IEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 18 l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
-+|..+||||||||++|+++|+.|++.|.+|+|+|+++..++
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~ 60 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY 60 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC
Confidence 345679999999999999999999999999999999976544
No 446
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=84.10 E-value=0.86 Score=48.75 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
...|+|||+|.+|+-.|..|++.|.+|+++++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 45799999999999999999999999999998654
No 447
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.07 E-value=0.63 Score=51.74 Aligned_cols=33 Identities=24% Similarity=0.351 Sum_probs=30.8
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 359999999999999999999999999999875
No 448
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=84.04 E-value=0.51 Score=54.39 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=34.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGS 59 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG 59 (539)
..|+|||+|..|+-+|..|++.|.+|.++|+++++..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4799999999999999999999999999999988754
No 449
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=84.03 E-value=1.1 Score=44.06 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=30.5
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
...|+|||+|-.|..+|..|++.|. +|.++.|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3469999999999999999999997 999998863
No 450
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=83.90 E-value=1.9 Score=47.46 Aligned_cols=41 Identities=32% Similarity=0.340 Sum_probs=37.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
.++||||||+|++||+||+.|+++|.+|+||||....||..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCcc
Confidence 46899999999999999999999999999999998776543
No 451
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=83.85 E-value=0.89 Score=46.35 Aligned_cols=33 Identities=33% Similarity=0.395 Sum_probs=30.7
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|||+|-.|+.+|..|+..|.+|+++|++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 469999999999999999999999999999874
No 452
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=83.79 E-value=0.93 Score=43.21 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=30.4
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 469999999999999999999999999999874
No 453
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=83.69 E-value=1.1 Score=44.53 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=34.3
Q ss_pred CcccEEEECCC-hhHHHHHHHHhhCCCeEEEeccC--------CCCCCCccc
Q 009226 21 TAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN--------PFYGSHFSS 63 (539)
Q Consensus 21 ~~~DVIIIGaG-l~GL~aA~~Lar~G~~VlvlE~~--------~~~GG~~~s 63 (539)
....|+|||+| +.|..+|..|.+.|.+|++++++ ..+++..++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~ 227 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHH 227 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCE
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhccc
Confidence 44689999999 67999999999999999988664 556654443
No 454
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.68 E-value=0.94 Score=44.93 Aligned_cols=36 Identities=25% Similarity=0.359 Sum_probs=31.2
Q ss_pred cccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCCC
Q 009226 22 AFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPFY 57 (539)
Q Consensus 22 ~~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~~~ 57 (539)
..-|+|.|| |.-|..++..|.+.|++|.+++++..-
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 356999998 999999999999999999999988643
No 455
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=83.60 E-value=0.85 Score=47.83 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=31.9
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccC
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
.....|+|||+|-.|...|..|.+.|.+|+|++++
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 34567999999999999999999999999999985
No 456
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=83.47 E-value=0.85 Score=42.17 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.2
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIG-aGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|.| +|.-|...+..|.+.|++|.++.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 4699999 59999999999999999999999974
No 457
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=83.39 E-value=1.7 Score=47.31 Aligned_cols=42 Identities=21% Similarity=0.160 Sum_probs=37.6
Q ss_pred CCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 20 PTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 20 ~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
+.++||||||+|++||.||+.|+++|.+|+||||....||..
T Consensus 16 ~~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s 57 (621)
T 2h88_A 16 DHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHT 57 (621)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 346899999999999999999999999999999988766643
No 458
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=83.22 E-value=1.7 Score=42.69 Aligned_cols=47 Identities=17% Similarity=0.130 Sum_probs=37.5
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 8 ~~~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
.+|...++..|.. ..|.|||.|.-|...|..|+..|.+|+.++++..
T Consensus 110 g~w~~~~~~~l~g--~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~ 156 (290)
T 3gvx_A 110 GIFRQSPTTLLYG--KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSV 156 (290)
T ss_dssp TCCCCCCCCCCTT--CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred cccccCCceeeec--chheeeccCchhHHHHHHHHhhCcEEEEEecccc
Confidence 3565554444443 4699999999999999999999999999998754
No 459
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=83.13 E-value=0.85 Score=44.87 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=27.3
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
.|-+||-|.-|+..|..|.++|++|.++|++..
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 599999999999999999999999999998764
No 460
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.12 E-value=1.3 Score=49.21 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=31.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
--.|.|||+|..|.-.|..++++|++|+++|.++.
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 34799999999999999999999999999998753
No 461
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=83.06 E-value=1.1 Score=42.42 Aligned_cols=33 Identities=15% Similarity=0.118 Sum_probs=30.5
Q ss_pred ccEEEECCChhHHHHHHHHhhCCC----eEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGK----SVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~----~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++|+ +|.++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999974
No 462
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=83.05 E-value=0.47 Score=40.74 Aligned_cols=54 Identities=4% Similarity=-0.072 Sum_probs=40.8
Q ss_pred CcEEEcCEEEEC-CCCCCCCCCcccchhhhhhhhhcccCCCcceEEEEEEEecCCCC
Q 009226 322 GQDILSHKLVLD-PSFTVPGSLASSHQQLQESFQAFSLSDNKGKVARGICITRSSLK 377 (539)
Q Consensus 322 G~~i~Ad~VI~~-p~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~vsr~i~I~~~~l~ 377 (539)
.++++||+||++ |...+.. +.++|+||..+....++..++...|.++.+++||=
T Consensus 3 ~~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW 57 (130)
T 2e1m_B 3 TQTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWW 57 (130)
T ss_dssp CEEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGG
T ss_pred ceEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCC
Confidence 356899999986 3333333 35788899887776677778999999999999964
No 463
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=82.89 E-value=1.2 Score=44.34 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.8
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
...|.|||+|..|+.+|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999874
No 464
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=82.83 E-value=1.5 Score=44.62 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.6
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|.|||+|-.|..+|.++.+.|++|.++|.+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999999764
No 465
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=82.83 E-value=0.91 Score=52.64 Aligned_cols=33 Identities=24% Similarity=0.299 Sum_probs=30.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCC-eEEEeccCCC
Q 009226 24 DLIVIGTGLPESVISAAASASGK-SVLHLDPNPF 56 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~~ 56 (539)
.|+|||+|..|+-+|..|++.|. +|++++++++
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999995 8999999873
No 466
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.62 E-value=1 Score=43.02 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=28.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEecc
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDP 53 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~ 53 (539)
.|.|||+|.-|...|..|+++|++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 488999999999999999999999999876
No 467
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=82.60 E-value=0.95 Score=43.91 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=30.9
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|+|||+|-.|...|..|++.|.+|.+++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3569999999999999999999999999999873
No 468
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=82.52 E-value=1.1 Score=45.11 Aligned_cols=34 Identities=18% Similarity=0.090 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|+|.|| |.-|..++..|.+.|++|.++.++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~ 63 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 63 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCc
Confidence 35999997 99999999999999999999998753
No 469
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=82.41 E-value=1.1 Score=45.68 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=31.8
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~~ 55 (539)
.+-.|||+|+|-+|..+|..|...|. +|.++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34679999999999999999999998 999999984
No 470
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.40 E-value=1.1 Score=43.90 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3569999999999999999999999999999874
No 471
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=82.37 E-value=1 Score=41.49 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=29.6
Q ss_pred cEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIG-aGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|+|.| +|.-|..++..|.++|++|..+.|+.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 489999 89999999999999999999999875
No 472
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.35 E-value=0.98 Score=43.87 Aligned_cols=33 Identities=9% Similarity=0.181 Sum_probs=29.7
Q ss_pred ccEEEECCChhHHHHHHHHhhC--CCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASAS--GKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~--G~~VlvlE~~~ 55 (539)
..|.|||+|.-|...|..|+++ |.+|.++|++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 4699999999999999999998 68999999864
No 473
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=82.34 E-value=1.3 Score=44.67 Aligned_cols=52 Identities=13% Similarity=0.131 Sum_probs=40.6
Q ss_pred ChHHHHHHHHHHHCCcEEEeCCcceEEEEecCCCcEEEEEe-CCCc--EEEcCEEEE
Q 009226 279 GELPQAFCRRAAVKGCLYVLRMPVISLLTDQNSGSYKGVRL-ASGQ--DILSHKLVL 332 (539)
Q Consensus 279 geL~qal~r~~a~~Gg~i~L~~~V~~I~~~~~~g~~~gV~l-~~G~--~i~Ad~VI~ 332 (539)
.++.+.|.+.+...|+++++++.|++|..+ ++..+.|++ .+|+ +++||.||.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~--~~~~~~v~~~~~g~~~~~~a~~vV~ 157 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDL--QGERPYVTFERDGERLRLDCDYIAG 157 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECT--TSSSCEEEEEETTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEe--cCCceEEEEecCCcEEEEEeCEEEE
Confidence 467788888888889999999999999764 222245666 6887 799999994
No 474
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=82.29 E-value=1.2 Score=44.51 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCC--eEEEeccC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGK--SVLHLDPN 54 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~ 54 (539)
...|.|||+|..|.++|..|+..|. +|.++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 3579999999999999999999997 89999985
No 475
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=82.28 E-value=1.8 Score=41.19 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=29.5
Q ss_pred cccEEEECC-Ch-hHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGT-GL-PESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGa-Gl-~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..-|+|.|+ |- -|..+|..|++.|.+|++++++.
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 345899998 74 89999999999999999999863
No 476
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=82.26 E-value=1.5 Score=42.09 Aligned_cols=32 Identities=22% Similarity=0.356 Sum_probs=30.0
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.+.|||+|-.|...|..|.+.|.+|.+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999873
No 477
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=82.08 E-value=2.3 Score=41.08 Aligned_cols=53 Identities=8% Similarity=0.054 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHH-CCcEEEeCCcceEEEEecCCCcEEEEEeC---------CC-----cEEEcCEEEEC
Q 009226 279 GELPQAFCRRAAV-KGCLYVLRMPVISLLTDQNSGSYKGVRLA---------SG-----QDILSHKLVLD 333 (539)
Q Consensus 279 geL~qal~r~~a~-~Gg~i~L~~~V~~I~~~~~~g~~~gV~l~---------~G-----~~i~Ad~VI~~ 333 (539)
.++.+++.+.+.. .|.++++++.|++|..+ ++++.+|++. +| ++++||.||..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~--~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE--TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec--CCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 5677777777765 69999999999999877 6777777653 32 57999999953
No 478
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=82.04 E-value=0.94 Score=50.07 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=35.1
Q ss_pred ccEEEEC--CChhHHHHHHHHhhCCCeEEEeccCCCCCCCc
Q 009226 23 FDLIVIG--TGLPESVISAAASASGKSVLHLDPNPFYGSHF 61 (539)
Q Consensus 23 ~DVIIIG--aGl~GL~aA~~Lar~G~~VlvlE~~~~~GG~~ 61 (539)
.+|+||| +|..|+-+|..|++.|++|.++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 4599999 99999999999999999999999998876543
No 479
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=82.01 E-value=1.2 Score=45.43 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCC-eEEEeccC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGK-SVLHLDPN 54 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~-~VlvlE~~ 54 (539)
..-.|+|+|+|-+|..+|..|...|. +|.++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 44679999999999999999999998 89999998
No 480
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.94 E-value=0.95 Score=43.97 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=28.9
Q ss_pred cEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.|.|||+|.-|...|..|++.|++|.+++ +.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 69999999999999999999999999998 54
No 481
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=81.83 E-value=2.2 Score=46.72 Aligned_cols=35 Identities=34% Similarity=0.498 Sum_probs=33.3
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.+|||||||||++|+.||++|++.|.+|+++|++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 46999999999999999999999999999999984
No 482
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=81.56 E-value=1.4 Score=41.53 Aligned_cols=42 Identities=19% Similarity=0.113 Sum_probs=31.0
Q ss_pred CCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccC
Q 009226 13 PPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 13 ~~~~~l~~~~~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
++.+..+....-|+|.|| |--|..+|..|++.|.+|.+++++
T Consensus 5 ~~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 5 HHHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp ----CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCC
Confidence 344445555566888886 556999999999999999999885
No 483
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=81.56 E-value=1.4 Score=42.99 Aligned_cols=32 Identities=6% Similarity=0.236 Sum_probs=29.2
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|-.|..+|..|++.| +|.+.+++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998863
No 484
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=81.49 E-value=1.3 Score=46.72 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.2
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..-|+|+|+|-.|..+|..|++.|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4569999999999999999999999999999874
No 485
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=81.44 E-value=2.5 Score=41.75 Aligned_cols=36 Identities=28% Similarity=0.351 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
....|.|||.|.-|...|..|...|.+|++++++..
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPN 176 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 345699999999999999999999999999998753
No 486
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=81.43 E-value=1.2 Score=46.56 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=30.1
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
..|+|+|+|..|...|..|++.|.+|.+++++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 469999999999999999999999999998863
No 487
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.43 E-value=1.3 Score=43.34 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=31.1
Q ss_pred cccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 22 AFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 22 ~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3569999999999999999999999999999864
No 488
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=81.39 E-value=2.5 Score=42.18 Aligned_cols=36 Identities=17% Similarity=0.106 Sum_probs=32.2
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
....|.|||.|..|...|..|+..|.+|++++++..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 345699999999999999999999999999998754
No 489
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=81.31 E-value=1.5 Score=41.60 Aligned_cols=45 Identities=11% Similarity=0.106 Sum_probs=29.3
Q ss_pred CCCCCCCCCCCCcccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 10 LPVPPYPPIEPTAFDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 10 ~~~~~~~~l~~~~~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
+|.+++..-+. .-|+|.|+ |--|..+|..|++.|.+|.+++++..
T Consensus 12 ~~~~~~~~~m~--k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~ 57 (251)
T 3orf_A 12 SGLVPRGSHMS--KNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN 57 (251)
T ss_dssp ----------C--CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred ccccccccccC--CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 33334444443 34888886 56899999999999999999998764
No 490
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=81.24 E-value=1.4 Score=41.96 Aligned_cols=38 Identities=11% Similarity=-0.038 Sum_probs=30.7
Q ss_pred CCCCcccEEEECC---ChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 18 IEPTAFDLIVIGT---GLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 18 l~~~~~DVIIIGa---Gl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
......-|+|.|+ |--|..+|..|++.|.+|.++++++
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~ 50 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD 50 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch
Confidence 3334456899996 4679999999999999999998873
No 491
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=81.18 E-value=2.5 Score=42.07 Aligned_cols=46 Identities=22% Similarity=0.320 Sum_probs=37.3
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 8 ~~~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
.+|....+..|. ...|.|||.|.-|...|..|...|.+|+.++++.
T Consensus 128 g~W~~~~~~~l~--g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~ 173 (324)
T 3hg7_A 128 RLWQSHPYQGLK--GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSG 173 (324)
T ss_dssp TCCCCCCCCCST--TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCcCCCCcccc--cceEEEEEECHHHHHHHHHHHhCCCEEEEEcCCh
Confidence 357654444444 3569999999999999999999999999999875
No 492
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=80.87 E-value=1.5 Score=43.11 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=30.6
Q ss_pred ccEEEECC-ChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGT-GLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGa-Gl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..|+|.|| |.-|..+|..|++.|++|.+++++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 45899997 99999999999999999999998753
No 493
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=80.66 E-value=2.7 Score=41.59 Aligned_cols=36 Identities=22% Similarity=0.233 Sum_probs=32.1
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
....|.|||.|.-|...|..|...|.+|++++++..
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 345699999999999999999999999999998753
No 494
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=80.59 E-value=1.1 Score=41.85 Aligned_cols=33 Identities=9% Similarity=0.174 Sum_probs=29.9
Q ss_pred ccEEEEC-CChhHHHHHHHHhhCC-CeEEEeccCC
Q 009226 23 FDLIVIG-TGLPESVISAAASASG-KSVLHLDPNP 55 (539)
Q Consensus 23 ~DVIIIG-aGl~GL~aA~~Lar~G-~~VlvlE~~~ 55 (539)
..|+|.| +|.-|..+|..|++.| ++|.++.|+.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 4699999 6999999999999999 8999999874
No 495
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=80.58 E-value=1.2 Score=43.68 Aligned_cols=32 Identities=16% Similarity=0.101 Sum_probs=29.8
Q ss_pred cEEEECCChhHHHHHHHHhhCCC--eEEEeccCC
Q 009226 24 DLIVIGTGLPESVISAAASASGK--SVLHLDPNP 55 (539)
Q Consensus 24 DVIIIGaGl~GL~aA~~Lar~G~--~VlvlE~~~ 55 (539)
.|.|||+|..|.+.|..|++.|. +|.++|.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 999999875
No 496
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=80.58 E-value=1.5 Score=43.25 Aligned_cols=43 Identities=16% Similarity=0.074 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCcccEEEEC-CChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 11 PVPPYPPIEPTAFDLIVIG-TGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 11 ~~~~~~~l~~~~~DVIIIG-aGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
|.++...+.+ ..|+|.| +|.-|..++..|.+.|++|.+++++.
T Consensus 12 ~~~~~~~~~~--~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 55 (333)
T 2q1w_A 12 SGLVPRGSHM--KKVFITGICGQIGSHIAELLLERGDKVVGIDNFA 55 (333)
T ss_dssp ---------C--CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CceeeecCCC--CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4455555554 3599998 69999999999999999999999864
No 497
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=80.54 E-value=2.1 Score=42.67 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=31.7
Q ss_pred CcccEEEECCChhHHHHHHHHhhCCCeEEEeccCC
Q 009226 21 TAFDLIVIGTGLPESVISAAASASGKSVLHLDPNP 55 (539)
Q Consensus 21 ~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~ 55 (539)
....|.|||.|..|...|..|+..|.+|++++++.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34579999999999999999999999999999865
No 498
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=80.32 E-value=1.4 Score=47.41 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=32.3
Q ss_pred ccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 23 FDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 23 ~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
..++|||.|--|...|..|.+.|++|+++|+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChH
Confidence 5799999999999999999999999999999875
No 499
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=80.31 E-value=2.9 Score=41.45 Aligned_cols=47 Identities=13% Similarity=0.113 Sum_probs=37.2
Q ss_pred CCCCCCCCCCCCCCcccEEEECCChhHHHHHHHHhhCCCeEEEeccCCC
Q 009226 8 SELPVPPYPPIEPTAFDLIVIGTGLPESVISAAASASGKSVLHLDPNPF 56 (539)
Q Consensus 8 ~~~~~~~~~~l~~~~~DVIIIGaGl~GL~aA~~Lar~G~~VlvlE~~~~ 56 (539)
.+|...+...| ....|.|||.|.-|...|..|+..|.+|+.++++..
T Consensus 127 g~W~~~~~~~l--~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~ 173 (315)
T 3pp8_A 127 ALWKPLPEYTR--EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRK 173 (315)
T ss_dssp TCCCCCCCCCS--TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred cccCCCCCCCc--CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCch
Confidence 45654433333 345799999999999999999999999999998754
No 500
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=80.30 E-value=2.1 Score=42.01 Aligned_cols=36 Identities=8% Similarity=0.077 Sum_probs=31.3
Q ss_pred CCCcccEEEECCC-hhHHHHHHHHhhCCCeEEEeccC
Q 009226 19 EPTAFDLIVIGTG-LPESVISAAASASGKSVLHLDPN 54 (539)
Q Consensus 19 ~~~~~DVIIIGaG-l~GL~aA~~Lar~G~~VlvlE~~ 54 (539)
+.....|+|||+| +.|.-+|..|.+.|.+|+++.++
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 3345689999999 68999999999999999999754
Done!