Query 009229
Match_columns 539
No_of_seqs 472 out of 2610
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 22:00:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009229.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009229hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2562 Protein phosphatase 2 100.0 6E-108 1E-112 839.6 35.0 492 13-539 1-493 (493)
2 KOG4223 Reticulocalbin, calume 99.8 5.6E-18 1.2E-22 169.6 18.4 222 214-464 75-302 (325)
3 KOG0044 Ca2+ sensor (EF-Hand s 99.7 5.4E-17 1.2E-21 154.9 11.8 157 312-474 20-183 (193)
4 COG5126 FRQ1 Ca2+-binding prot 99.7 1.8E-16 4E-21 146.6 13.3 139 313-465 12-154 (160)
5 KOG0034 Ca2+/calmodulin-depend 99.7 4.6E-16 9.9E-21 148.4 11.4 143 314-465 26-173 (187)
6 KOG0044 Ca2+ sensor (EF-Hand s 99.6 9.9E-15 2.1E-19 139.4 13.5 140 149-293 25-172 (193)
7 KOG0027 Calmodulin and related 99.6 9.7E-15 2.1E-19 135.3 13.1 135 269-466 9-148 (151)
8 PTZ00183 centrin; Provisional 99.5 3.7E-13 8E-18 124.1 11.9 136 319-467 15-154 (158)
9 PTZ00184 calmodulin; Provision 99.5 6.2E-13 1.4E-17 121.0 13.1 138 315-465 5-146 (149)
10 KOG0027 Calmodulin and related 99.5 1E-12 2.2E-17 121.8 14.4 133 185-345 12-145 (151)
11 COG5126 FRQ1 Ca2+-binding prot 99.4 2.2E-12 4.7E-17 119.6 13.0 127 186-345 25-152 (160)
12 KOG4223 Reticulocalbin, calume 99.4 1.4E-12 3.1E-17 131.0 12.3 211 184-418 80-301 (325)
13 PTZ00183 centrin; Provisional 99.3 5.3E-12 1.1E-16 116.4 11.0 132 269-421 18-153 (158)
14 PTZ00184 calmodulin; Provision 99.3 2E-11 4.4E-16 111.0 11.9 131 269-420 12-146 (149)
15 KOG0028 Ca2+-binding protein ( 99.3 6.1E-11 1.3E-15 108.1 12.1 134 269-465 34-168 (172)
16 KOG0028 Ca2+-binding protein ( 99.2 7.9E-11 1.7E-15 107.4 12.3 130 186-347 38-168 (172)
17 KOG0038 Ca2+-binding kinase in 99.2 4E-11 8.7E-16 107.4 7.7 155 311-474 18-185 (189)
18 KOG0036 Predicted mitochondria 99.1 6.2E-10 1.3E-14 115.0 11.8 145 322-485 15-163 (463)
19 KOG4251 Calcium binding protei 99.1 4.7E-10 1E-14 108.5 10.1 215 219-464 104-342 (362)
20 KOG0037 Ca2+-binding protein, 99.1 3.6E-09 7.8E-14 101.5 15.9 146 186-413 62-209 (221)
21 KOG0031 Myosin regulatory ligh 99.0 2.9E-09 6.2E-14 96.6 12.8 126 323-465 34-163 (171)
22 KOG0036 Predicted mitochondria 99.0 3.9E-09 8.5E-14 109.2 13.5 107 184-313 17-125 (463)
23 KOG0037 Ca2+-binding protein, 98.9 2.6E-08 5.7E-13 95.6 14.3 158 267-465 56-218 (221)
24 KOG0034 Ca2+/calmodulin-depend 98.9 3.8E-08 8.2E-13 94.2 14.3 129 221-386 38-175 (187)
25 KOG0030 Myosin essential light 98.9 3.5E-08 7.5E-13 88.3 12.3 114 185-313 15-131 (152)
26 KOG0030 Myosin essential light 98.8 1E-07 2.3E-12 85.3 12.6 138 268-467 11-151 (152)
27 KOG2643 Ca2+ binding protein, 98.8 5.4E-08 1.2E-12 101.4 11.8 234 193-465 211-451 (489)
28 PF13499 EF-hand_7: EF-hand do 98.7 2.1E-08 4.5E-13 79.3 5.9 65 395-464 1-65 (66)
29 KOG2643 Ca2+ binding protein, 98.5 1.6E-06 3.4E-11 90.7 14.7 156 225-426 295-457 (489)
30 PLN02964 phosphatidylserine de 98.5 5.3E-07 1.1E-11 100.8 10.9 99 319-422 141-243 (644)
31 KOG4251 Calcium binding protei 98.4 1.3E-06 2.8E-11 85.0 10.2 204 266-484 99-326 (362)
32 PF13499 EF-hand_7: EF-hand do 98.4 1.8E-07 3.9E-12 73.9 3.2 28 393-420 39-66 (66)
33 cd00252 SPARC_EC SPARC_EC; ext 98.3 9.8E-07 2.1E-11 78.2 6.6 60 393-465 47-106 (116)
34 KOG0031 Myosin regulatory ligh 98.3 6.3E-06 1.4E-10 75.2 10.9 130 270-420 34-163 (171)
35 cd05022 S-100A13 S-100A13: S-1 98.3 1.9E-06 4.2E-11 72.8 6.4 64 394-465 8-73 (89)
36 cd05027 S-100B S-100B: S-100B 98.2 7.2E-06 1.6E-10 69.2 7.7 68 394-465 8-77 (88)
37 cd05026 S-100Z S-100Z: S-100Z 98.1 7.2E-06 1.6E-10 69.9 7.3 68 394-465 10-79 (93)
38 cd05022 S-100A13 S-100A13: S-1 98.1 6.7E-06 1.5E-10 69.5 6.5 60 269-345 9-71 (89)
39 PLN02964 phosphatidylserine de 98.1 1.1E-05 2.3E-10 90.5 8.7 125 326-467 112-243 (644)
40 cd05031 S-100A10_like S-100A10 98.0 1.5E-05 3.3E-10 67.8 7.6 72 393-468 7-80 (94)
41 KOG2562 Protein phosphatase 2 98.0 5.2E-05 1.1E-09 80.2 12.7 108 219-345 142-249 (493)
42 cd05025 S-100A1 S-100A1: S-100 98.0 2.4E-05 5.1E-10 66.3 7.6 69 393-465 8-78 (92)
43 cd05023 S-100A11 S-100A11: S-1 97.9 3.7E-05 7.9E-10 65.0 7.5 68 394-465 9-78 (89)
44 KOG0038 Ca2+-binding kinase in 97.9 4.3E-05 9.3E-10 69.1 8.1 101 180-291 70-172 (189)
45 cd00052 EH Eps15 homology doma 97.9 5.7E-05 1.2E-09 59.2 8.0 60 185-245 3-62 (67)
46 KOG4666 Predicted phosphate ac 97.9 1.4E-05 3.1E-10 80.7 5.5 118 333-465 239-357 (412)
47 cd05027 S-100B S-100B: S-100B 97.9 3E-05 6.4E-10 65.5 6.5 60 269-345 9-75 (88)
48 KOG0377 Protein serine/threoni 97.9 4.3E-05 9.3E-10 80.0 8.4 132 322-464 465-612 (631)
49 cd00052 EH Eps15 homology doma 97.9 2.2E-05 4.8E-10 61.6 5.0 58 397-465 2-59 (67)
50 PF13833 EF-hand_8: EF-hand do 97.8 5.8E-05 1.3E-09 57.1 6.7 52 371-422 1-53 (54)
51 smart00027 EH Eps15 homology d 97.8 6E-05 1.3E-09 64.4 7.3 61 393-464 9-69 (96)
52 cd00213 S-100 S-100: S-100 dom 97.8 8.1E-05 1.8E-09 62.3 7.6 70 393-466 7-78 (88)
53 cd05026 S-100Z S-100Z: S-100Z 97.8 0.00011 2.4E-09 62.6 8.0 61 185-245 14-82 (93)
54 KOG0041 Predicted Ca2+-binding 97.7 5.3E-05 1.2E-09 72.0 5.8 73 377-463 87-159 (244)
55 cd05029 S-100A6 S-100A6: S-100 97.7 0.00016 3.4E-09 61.0 8.1 61 185-245 14-80 (88)
56 smart00027 EH Eps15 homology d 97.7 0.00017 3.7E-09 61.5 8.4 62 185-247 14-75 (96)
57 cd00252 SPARC_EC SPARC_EC; ext 97.7 7E-05 1.5E-09 66.5 5.5 54 326-384 53-106 (116)
58 cd05025 S-100A1 S-100A1: S-100 97.7 0.00012 2.6E-09 62.0 6.5 63 266-345 7-76 (92)
59 PF00036 EF-hand_1: EF hand; 97.6 7E-05 1.5E-09 49.8 3.6 28 395-422 1-28 (29)
60 cd00051 EFh EF-hand, calcium b 97.6 0.00014 3E-09 54.8 5.7 60 396-464 2-61 (63)
61 cd05031 S-100A10_like S-100A10 97.6 0.00017 3.7E-09 61.4 6.8 63 266-345 6-75 (94)
62 cd00051 EFh EF-hand, calcium b 97.6 0.00017 3.7E-09 54.2 6.0 55 366-420 8-62 (63)
63 PF13833 EF-hand_8: EF-hand do 97.6 0.00027 5.8E-09 53.5 6.7 51 194-244 1-53 (54)
64 cd05029 S-100A6 S-100A6: S-100 97.5 0.00026 5.6E-09 59.8 5.9 59 270-345 12-75 (88)
65 cd00213 S-100 S-100: S-100 dom 97.4 0.00067 1.5E-08 56.7 7.4 61 185-245 12-80 (88)
66 PF13202 EF-hand_5: EF hand; P 97.3 0.00026 5.6E-09 45.3 3.4 24 396-419 1-24 (25)
67 KOG0751 Mitochondrial aspartat 97.3 0.014 3.1E-07 62.4 18.0 251 163-464 53-311 (694)
68 PF10591 SPARC_Ca_bdg: Secrete 97.3 9.5E-05 2.1E-09 65.4 1.4 63 391-464 51-113 (113)
69 PF14658 EF-hand_9: EF-hand do 97.3 0.00086 1.9E-08 53.2 6.6 59 186-244 3-64 (66)
70 cd05023 S-100A11 S-100A11: S-1 97.2 0.0015 3.3E-08 55.2 7.8 61 185-245 13-81 (89)
71 KOG0751 Mitochondrial aspartat 97.2 0.0091 2E-07 63.9 14.9 59 353-422 149-207 (694)
72 cd05030 calgranulins Calgranul 97.1 0.00042 9.2E-09 58.3 3.7 30 393-422 50-79 (88)
73 KOG0377 Protein serine/threoni 97.1 0.0035 7.6E-08 66.1 10.6 59 270-345 549-611 (631)
74 KOG0041 Predicted Ca2+-binding 97.0 0.00073 1.6E-08 64.4 4.7 101 310-414 88-195 (244)
75 PF13405 EF-hand_6: EF-hand do 97.0 0.00091 2E-08 44.8 3.6 27 395-421 1-27 (31)
76 PF00036 EF-hand_1: EF hand; 97.0 0.00058 1.3E-08 45.3 2.6 26 218-243 2-27 (29)
77 PRK12309 transaldolase/EF-hand 96.9 0.0024 5.1E-08 68.2 7.5 66 377-464 315-382 (391)
78 cd05030 calgranulins Calgranul 96.7 0.0045 9.8E-08 52.1 6.6 59 270-345 10-75 (88)
79 PF14658 EF-hand_9: EF-hand do 96.7 0.0021 4.5E-08 51.0 3.8 57 272-345 2-60 (66)
80 PF14788 EF-hand_10: EF hand; 96.6 0.006 1.3E-07 45.9 5.7 49 374-422 1-49 (51)
81 cd05024 S-100A10 S-100A10: A s 96.6 0.0061 1.3E-07 51.6 6.3 55 327-386 14-76 (91)
82 KOG0040 Ca2+-binding actin-bun 96.6 0.016 3.4E-07 68.9 11.6 134 221-385 2258-2397(2399)
83 cd05024 S-100A10 S-100A10: A s 96.2 0.019 4.2E-07 48.6 7.0 64 396-464 10-73 (91)
84 PRK12309 transaldolase/EF-hand 96.1 0.0077 1.7E-07 64.4 5.6 48 363-423 339-386 (391)
85 KOG0040 Ca2+-binding actin-bun 96.1 0.036 7.8E-07 66.0 11.0 127 270-464 2255-2395(2399)
86 PF10591 SPARC_Ca_bdg: Secrete 96.1 0.0074 1.6E-07 53.3 4.2 65 314-417 47-111 (113)
87 PF13405 EF-hand_6: EF-hand do 95.6 0.014 3E-07 39.0 3.0 28 270-299 2-30 (31)
88 PF12763 EF-hand_4: Cytoskelet 95.3 0.053 1.1E-06 47.2 6.5 57 185-243 14-70 (104)
89 KOG4065 Uncharacterized conser 95.3 0.056 1.2E-06 47.4 6.5 72 392-464 64-142 (144)
90 PF12763 EF-hand_4: Cytoskelet 95.1 0.061 1.3E-06 46.9 6.4 61 393-465 9-69 (104)
91 PF13202 EF-hand_5: EF hand; P 94.9 0.028 6E-07 35.9 2.7 22 270-291 1-22 (25)
92 KOG4666 Predicted phosphate ac 94.5 0.083 1.8E-06 54.2 6.5 98 181-297 259-358 (412)
93 smart00054 EFh EF-hand, calciu 94.0 0.061 1.3E-06 33.4 2.9 27 396-422 2-28 (29)
94 KOG4065 Uncharacterized conser 93.8 0.066 1.4E-06 47.0 3.5 55 328-382 74-141 (144)
95 PF14788 EF-hand_10: EF hand; 93.3 0.2 4.2E-06 37.8 4.8 45 165-209 4-49 (51)
96 KOG0169 Phosphoinositide-speci 93.0 0.34 7.3E-06 55.0 8.4 128 323-465 138-272 (746)
97 KOG3866 DNA-binding protein of 92.9 0.14 3.1E-06 52.0 4.8 70 396-465 246-322 (442)
98 KOG3555 Ca2+-binding proteogly 92.4 0.11 2.4E-06 53.6 3.4 82 393-488 249-352 (434)
99 KOG0169 Phosphoinositide-speci 91.9 1 2.2E-05 51.3 10.4 133 220-389 140-277 (746)
100 KOG1029 Endocytic adaptor prot 91.9 0.77 1.7E-05 52.1 9.2 58 184-242 198-255 (1118)
101 KOG0046 Ca2+-binding actin-bun 91.3 0.29 6.2E-06 53.3 5.1 73 315-388 13-87 (627)
102 KOG4347 GTPase-activating prot 91.1 0.17 3.8E-06 56.2 3.4 79 363-458 560-638 (671)
103 PF09069 EF-hand_3: EF-hand; 90.0 1.4 3.1E-05 37.3 7.2 72 393-467 2-75 (90)
104 smart00054 EFh EF-hand, calciu 89.9 0.34 7.3E-06 29.8 2.6 24 220-243 4-27 (29)
105 KOG0046 Ca2+-binding actin-bun 89.8 0.63 1.4E-05 50.7 6.1 63 394-463 19-81 (627)
106 PF05042 Caleosin: Caleosin re 88.9 3.3 7.1E-05 39.2 9.4 77 392-471 94-170 (174)
107 KOG4578 Uncharacterized conser 86.5 0.35 7.6E-06 49.7 1.6 63 395-465 334-396 (421)
108 PF05042 Caleosin: Caleosin re 85.2 2.2 4.8E-05 40.4 6.1 64 358-422 96-166 (174)
109 PLN02952 phosphoinositide phos 83.8 2.5 5.5E-05 47.7 6.9 92 371-469 13-112 (599)
110 KOG1707 Predicted Ras related/ 83.4 4.1 8.8E-05 45.4 8.1 75 394-483 315-389 (625)
111 PF09279 EF-hand_like: Phospho 82.5 1.6 3.5E-05 35.8 3.6 60 329-389 8-72 (83)
112 KOG0039 Ferric reductase, NADH 82.4 2.2 4.7E-05 49.0 5.8 98 372-477 2-101 (646)
113 PF09279 EF-hand_like: Phospho 82.2 2 4.4E-05 35.2 4.1 59 184-243 3-68 (83)
114 KOG4347 GTPase-activating prot 81.4 1.7 3.6E-05 48.8 4.2 59 179-238 553-612 (671)
115 KOG3555 Ca2+-binding proteogly 79.3 3.6 7.9E-05 42.8 5.5 59 270-345 213-274 (434)
116 KOG4578 Uncharacterized conser 78.6 1.6 3.5E-05 45.0 2.8 63 358-420 333-396 (421)
117 KOG1707 Predicted Ras related/ 75.7 11 0.00023 42.2 8.2 25 322-346 316-340 (625)
118 KOG1029 Endocytic adaptor prot 73.7 28 0.00061 40.1 10.8 59 149-208 194-256 (1118)
119 KOG1265 Phospholipase C [Lipid 72.1 60 0.0013 38.2 13.0 146 175-346 142-296 (1189)
120 KOG3866 DNA-binding protein of 69.4 18 0.00039 37.3 7.5 93 199-293 225-321 (442)
121 KOG1924 RhoA GTPase effector D 68.7 25 0.00055 40.5 9.2 10 453-462 970-979 (1102)
122 PF04876 Tenui_NCP: Tenuivirus 62.8 30 0.00065 32.0 6.9 78 368-475 93-170 (175)
123 PRK12270 kgd alpha-ketoglutara 62.5 1.1E+02 0.0025 36.8 13.1 36 28-63 3-39 (1228)
124 KOG0998 Synaptic vesicle prote 61.0 9.8 0.00021 45.1 4.5 246 184-461 14-339 (847)
125 KOG1955 Ral-GTPase effector RA 60.2 13 0.00028 40.6 4.8 65 185-250 235-299 (737)
126 KOG4004 Matricellular protein 59.5 6.8 0.00015 37.9 2.3 54 400-464 193-247 (259)
127 KOG0035 Ca2+-binding actin-bun 56.1 26 0.00057 41.2 6.7 92 363-463 752-848 (890)
128 PF09069 EF-hand_3: EF-hand; 55.2 50 0.0011 28.0 6.6 65 219-291 6-70 (90)
129 PF08726 EFhand_Ca_insen: Ca2+ 50.8 22 0.00047 28.7 3.6 29 391-420 3-31 (69)
130 KOG4004 Matricellular protein 50.8 6.8 0.00015 37.8 0.8 30 319-348 185-215 (259)
131 PF08414 NADPH_Ox: Respiratory 48.9 23 0.0005 30.5 3.6 41 323-365 32-72 (100)
132 KOG1924 RhoA GTPase effector D 47.9 77 0.0017 36.9 8.4 16 405-420 888-903 (1102)
133 PLN02952 phosphoinositide phos 47.8 1E+02 0.0022 35.2 9.5 51 194-245 13-66 (599)
134 PF05517 p25-alpha: p25-alpha 46.5 53 0.0011 30.5 6.0 45 163-208 19-68 (154)
135 KOG1265 Phospholipase C [Lipid 44.3 1E+02 0.0022 36.5 8.8 91 195-291 197-294 (1189)
136 KOG1955 Ral-GTPase effector RA 43.1 32 0.0007 37.7 4.5 54 400-464 237-290 (737)
137 COG4359 Uncharacterized conser 40.2 43 0.00094 32.3 4.4 63 332-401 8-70 (220)
138 PF00404 Dockerin_1: Dockerin 38.7 26 0.00056 21.5 1.8 15 404-418 1-15 (21)
139 PF02761 Cbl_N2: CBL proto-onc 34.8 1.2E+02 0.0025 25.6 5.6 49 373-421 21-69 (85)
140 KOG0035 Ca2+-binding actin-bun 33.8 1.3E+02 0.0029 35.6 7.8 105 263-418 742-848 (890)
141 KOG2243 Ca2+ release channel ( 31.1 64 0.0014 39.7 4.6 77 400-486 4063-4145(5019)
142 PF05819 NolX: NolX protein; 30.0 7.6E+02 0.017 27.6 12.1 96 147-243 368-481 (624)
143 KOG0042 Glycerol-3-phosphate d 29.6 42 0.0009 37.6 2.8 61 396-465 595-655 (680)
144 PF11116 DUF2624: Protein of u 29.0 3.5E+02 0.0076 22.7 8.8 69 196-277 13-82 (85)
145 KOG0042 Glycerol-3-phosphate d 27.1 75 0.0016 35.7 4.2 75 314-392 586-663 (680)
146 KOG2557 Uncharacterized conser 27.0 1.8E+02 0.0039 31.1 6.7 56 371-426 71-126 (427)
147 PHA03185 UL14 tegument protein 26.4 2E+02 0.0042 28.0 6.3 21 42-62 139-159 (214)
148 PF08414 NADPH_Ox: Respiratory 26.1 77 0.0017 27.4 3.2 58 150-211 30-94 (100)
149 PF05517 p25-alpha: p25-alpha 25.1 5.5E+02 0.012 23.7 9.2 97 372-481 16-115 (154)
150 KOG4286 Dystrophin-like protei 24.9 75 0.0016 36.7 3.8 107 353-464 465-577 (966)
151 PF09068 EF-hand_2: EF hand; 24.6 2.6E+02 0.0056 25.1 6.6 81 216-300 41-127 (127)
No 1
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=100.00 E-value=5.9e-108 Score=839.60 Aligned_cols=492 Identities=65% Similarity=1.069 Sum_probs=471.0
Q ss_pred ccCccccccccccCCCCCCCCchhhhHHHhhcCChhhHHHHHHHHHHhhcC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 009229 13 CLDAELLQLQELSPLAFKSNPDFGQKLFDQWLSLPEANKLVTSLLNDAKAG-PLNVSANSSSSNAATNSLPSLFPAGSAP 91 (539)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~wl~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (539)
.+++|+||||..+|...+..+.-..+||.| +++|.+++.++++| +.|.. .+|++++...+|
T Consensus 1 ~~~~e~l~l~~~s~~~~~~~~~~~~~l~~~-------~~~~~sl~~~~~~~~~~n~~-----------~~~si~~~~~~~ 62 (493)
T KOG2562|consen 1 MLDGELLQLPLDSPTSLKSKPASSQELFDQ-------RRLVGSLAGDAKAGLPENVS-----------ELPSIFPFYTKP 62 (493)
T ss_pred CcChhhhcccccCccccCCchhHHHHHHHH-------HHHHHHhhhhhhhccccccc-----------cccccccCCCCC
Confidence 378999999999999999999999999999 99999999999999 77642 488888999999
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCCCCCCccCCCcccccCCcccccCCCCCChhhHHHHHHHHHHHhccCCCCCCHHHHHHH
Q 009229 92 PLSPRSTSGSPRVMKQRAGPSNLGSPLKVVSEPAKELIPQFYFQNGRPLPNELKEQCLFRINQFFYGHSDGLQIQEFKLV 171 (539)
Q Consensus 92 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~fy~p~g~p~~~~~~~~~l~~i~~~F~~~~~~l~~~~F~~i 171 (539)
|++|+++.++||..++++.+. .++.+.+..+. ..||+||||+|+|++.+..++++.+++. ..+|+.+
T Consensus 63 P~~~~~~~~~~~~s~~~~~~~--~s~~~~~~~~~-~~i~~f~f~~~~~~~~~~~e~~l~~~n~----------~~~~~~v 129 (493)
T KOG2562|consen 63 PLSPRSILGSPRTSRQRTFLN--LSSLELLNNDS-LLIPDFYFPNGRPPPLETKEQKLNRENR----------FAEIGSV 129 (493)
T ss_pred CCCCCCCCCCcchhhhccCCC--cChHHHhcCch-hcccceeccCCCCChhhhhHHHHHHHHh----------hhhhhhh
Confidence 999999999999877765543 45555566665 7899999999999999999999999872 6788999
Q ss_pred HHHhcCCchhhHHHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 009229 172 TKEICKLPSFFSTALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPG 251 (539)
Q Consensus 172 ~k~~~~lp~~~~~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~ 251 (539)
++++|+||+||+..+|.++++|.+|+|++..|+++|+...+.+++.+.+++++++.+++|||..++|+++++++|.+||
T Consensus 130 s~~vck~~~f~s~~~f~k~~~d~~g~it~~~Fi~~~~~~~~l~~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thp- 208 (493)
T KOG2562|consen 130 SKEVCKCPSFFSASTFRKIDGDDTGHITRDKFINYWMRGLMLTHTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHP- 208 (493)
T ss_pred hcccccCccccchhhhhhhccCcCCceeHHHHHHHHHhhhhHHHHHHHHHHHHHhccCccceeccccHHHHHHHHhcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhccc
Q 009229 252 LEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELD 331 (539)
Q Consensus 252 l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD 331 (539)
|.++...|+|+++|+++|++|||+.+|+.|+|+|+++|++++++++.|.++..+++++++.+||||+|||||||+||+||
T Consensus 209 l~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD 288 (493)
T KOG2562|consen 209 LEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELD 288 (493)
T ss_pred chhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCce
Q 009229 332 TDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVI 411 (539)
Q Consensus 332 ~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~I 411 (539)
+||||.|++++|++|++++++..+++|||+++.|.+....+|+|+|++|+||+++++++.++++++|||||+|+||||+|
T Consensus 289 ~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~L 368 (493)
T KOG2562|consen 289 TDHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGIL 368 (493)
T ss_pred cccccccCHHHHHHHhccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccchhHHHhhcchHHhhhhhccChhhh
Q 009229 412 TRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSGSVFNILFNLNKFMAFETRDPFLI 491 (539)
Q Consensus 412 s~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~~~~~n~l~n~~kf~~~E~rd~~~~ 491 (539)
+.+||++||++|+++|.++|+++++|+|++|||+||++|.+.|+||++||++|+++++|+|+|+|++|||+||+|||+++
T Consensus 369 t~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~skl~~~v~n~l~nl~kfm~~E~RE~~~~ 448 (493)
T KOG2562|consen 369 TLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKGSKLAGTVFNILFNLNKFMAHETREPFLI 448 (493)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhhccccchhhhhhccHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccCCCCChHHHHHHHHHHHhhcccccccccCCCcccccccccCCC
Q 009229 492 RQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF 539 (539)
Q Consensus 492 ~~~~~~~~~t~w~r~a~~ey~~l~~e~~~~~~~~~~~~~~~~~~~~~~ 539 (539)
+||+|.|.+|+|||||++||++|+|||+.++. ||+++||++ ++||
T Consensus 449 ~qd~Enp~~tdwdr~a~~ey~~l~~ee~~~~~--~s~~~~~~~-~~p~ 493 (493)
T KOG2562|consen 449 RQDRENPTLTDWDRFADREYDRLSAEEDVEES--GSFEVWDEP-ENPF 493 (493)
T ss_pred hccccCCChhHHHHHHHHHHHHHHhhhccccC--CcccccCCC-CCCC
Confidence 99999999999999999999999999998877 999999999 9997
No 2
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.78 E-value=5.6e-18 Score=169.62 Aligned_cols=222 Identities=12% Similarity=0.177 Sum_probs=166.5
Q ss_pred CHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhh
Q 009229 214 TMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRG 293 (539)
Q Consensus 214 ~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s 293 (539)
+.+...+++..+|.+++|+|+..++..+|. ..+.+|+...+.+-|...|++.+|+|++.|.+..
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~----------------~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~ 138 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIM----------------QSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQ 138 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHH----------------HHHHHHHHHHHHHHHHHhccCccceeeHHHhhhh
Confidence 445567778999999999999999999998 3356788888889999999999999999999843
Q ss_pred hHHHHhhhhccHHHHHHHhhccchhHHH-HHhhhhhcccCCCCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCC
Q 009229 294 NLIDAMQHADEEEDINKVLRYFSYEHFY-VIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVE 372 (539)
Q Consensus 294 ~~l~~l~~~~~eedi~~i~~~FSyehf~-~iy~~F~~lD~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~d 372 (539)
.. +......+....-+..+|.... +--.+|...|.|+||.++++||..|..+.-.+.+..-++...++..|+|+|
T Consensus 139 ~~----~~~~~~~~~~d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~D 214 (325)
T KOG4223|consen 139 TY----GRVDLPDEFPDEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGD 214 (325)
T ss_pred hh----hcccCccccccchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCC
Confidence 22 1110111111111112222221 445678899999999999999999988877777888888887788899999
Q ss_pred CcccHHHHHHHHHhccCCC-----chHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHh
Q 009229 373 GKMGYEDFVYFILSEEDKS-----SEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDM 447 (539)
Q Consensus 373 G~Idf~EFv~fl~~~~~~~-----~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~ 447 (539)
|+|+++||+.-+.+..... ....-+.+|..+|+|+||+|+.+||..++-... .. .-+..+..++..
T Consensus 215 G~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~-------~d--~A~~EA~hL~~e 285 (325)
T KOG4223|consen 215 GKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSE-------QD--HAKAEARHLLHE 285 (325)
T ss_pred CceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCC-------cc--HHHHHHHHHhhh
Confidence 9999999999888765321 133456889999999999999999998763211 11 123457889999
Q ss_pred hCCCCCCceeHHHHhhc
Q 009229 448 IGPENQSYITLRDLKGC 464 (539)
Q Consensus 448 id~~~dG~ITl~Df~~~ 464 (539)
.|.|+||++|++|++..
T Consensus 286 aD~dkD~kLs~eEIl~~ 302 (325)
T KOG4223|consen 286 ADEDKDGKLSKEEILEH 302 (325)
T ss_pred hccCccccccHHHHhhC
Confidence 99999999999999875
No 3
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.71 E-value=5.4e-17 Score=154.94 Aligned_cols=157 Identities=18% Similarity=0.253 Sum_probs=130.7
Q ss_pred hhccchhHHHHHhhhhhcccCCCCCccchhhHhhhc----CCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhc
Q 009229 312 LRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYG----NHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSE 387 (539)
Q Consensus 312 ~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~----~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~ 387 (539)
...|+..+..+.|+.|.. ....|.++.++|.... ...-+..+++++|. .||.|++|.|+|.|||..+...
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~----~fD~~~dg~i~F~Efi~als~~ 93 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFR----TFDKNKDGTIDFLEFICALSLT 93 (193)
T ss_pred hcCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHH----HhcccCCCCcCHHHHHHHHHHH
Confidence 357999999999999987 5678999999998732 23334556666665 6799999999999999999999
Q ss_pred cCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhcc--CCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc-
Q 009229 388 EDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMA--QEPVLFEDILCQIIDMIGPENQSYITLRDLKGC- 464 (539)
Q Consensus 388 ~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~--~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~- 464 (539)
..++..+.++++|++||+||||+|+..||..+.+.+...+.+.. ....+.++.+..+|..+|.|+||.||++||+..
T Consensus 94 ~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~ 173 (193)
T KOG0044|consen 94 SRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGC 173 (193)
T ss_pred cCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHh
Confidence 99999999999999999999999999999999999988876522 224457899999999999999999999999985
Q ss_pred ccchhHHHhh
Q 009229 465 KLSGSVFNIL 474 (539)
Q Consensus 465 ~~~~~~~n~l 474 (539)
.....++.+|
T Consensus 174 ~~d~~i~~~l 183 (193)
T KOG0044|consen 174 KADPSILRAL 183 (193)
T ss_pred hhCHHHHHHh
Confidence 4445555544
No 4
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.70 E-value=1.8e-16 Score=146.57 Aligned_cols=139 Identities=17% Similarity=0.250 Sum_probs=117.9
Q ss_pred hccchhHHHHHhhhhhcccCCCCCccchhhHhhh---cCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhcc-
Q 009229 313 RYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRY---GNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEE- 388 (539)
Q Consensus 313 ~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~---~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~- 388 (539)
..|+.++...++..|..+|.|++|.|++.+|..+ .+...+...+.++++.+ |. +.|.|+|.+|+.+|....
T Consensus 12 ~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~----d~-~~~~idf~~Fl~~ms~~~~ 86 (160)
T COG5126 12 TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEI----DA-GNETVDFPEFLTVMSVKLK 86 (160)
T ss_pred ccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhc----cC-CCCccCHHHHHHHHHHHhc
Confidence 3456666667788999999999999999999875 46677889999999865 55 889999999999998764
Q ss_pred CCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 389 DKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 389 ~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
....++.++++|++||+|+||+|+..||.+.+....+++. ++.+..|+..++++++|.|+|++|++..
T Consensus 87 ~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~---------deev~~ll~~~d~d~dG~i~~~eF~~~~ 154 (160)
T COG5126 87 RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLS---------DEEVEKLLKEYDEDGDGEIDYEEFKKLI 154 (160)
T ss_pred cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCC---------HHHHHHHHHhcCCCCCceEeHHHHHHHH
Confidence 5677999999999999999999999999999875444332 4568999999999999999999999854
No 5
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.66 E-value=4.6e-16 Score=148.40 Aligned_cols=143 Identities=24% Similarity=0.433 Sum_probs=117.3
Q ss_pred ccchhHHHHHhhhhhcccCC-CCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCc-ccHHHHHHHHHhccCCC
Q 009229 314 YFSYEHFYVIYCKFWELDTD-HDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGK-MGYEDFVYFILSEEDKS 391 (539)
Q Consensus 314 ~FSyehf~~iy~~F~~lD~D-~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~-Idf~EFv~fl~~~~~~~ 391 (539)
-||-++...+|++|.++|.+ ++|.|+++||..+..... ..+.+||+. .|+.+++|. |+|++|+..+.....+.
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~-Np~~~rI~~----~f~~~~~~~~v~F~~Fv~~ls~f~~~~ 100 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELAL-NPLADRIID----RFDTDGNGDPVDFEEFVRLLSVFSPKA 100 (187)
T ss_pred ccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhc-CcHHHHHHH----HHhccCCCCccCHHHHHHHHhhhcCCc
Confidence 48888899999999999999 999999999998763332 235566655 346666676 99999999999887776
Q ss_pred chH-HHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCC--CCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 392 SEP-SLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQE--PVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 392 ~~~-~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e--~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
... +++++|++||++++|+|+.+|+..++..+... +.. ....+++++.+|.++|.++||+|+++||.+..
T Consensus 101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~----~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v 173 (187)
T KOG0034|consen 101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGE----NDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVV 173 (187)
T ss_pred cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHcc----CCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 655 99999999999999999999999988665442 222 23457899999999999999999999999864
No 6
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.60 E-value=9.9e-15 Score=139.44 Aligned_cols=140 Identities=20% Similarity=0.323 Sum_probs=117.0
Q ss_pred HHHHHHHhc----cCCCC-CCHHHHHHHHHHhc--CCchhhHHHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHH
Q 009229 149 LFRINQFFY----GHSDG-LQIQEFKLVTKEIC--KLPSFFSTALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQI 221 (539)
Q Consensus 149 l~~i~~~F~----~~~~~-l~~~~F~~i~k~~~--~lp~~~~~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~ 221 (539)
.++|+..|+ .||+| ++.++|+.|++.++ |.+..++..+|+.||+|++|.|++.+|++.|....+++.++..++
T Consensus 25 ~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w 104 (193)
T KOG0044|consen 25 KKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKW 104 (193)
T ss_pred HHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhh
Confidence 344444444 46667 89999999999875 899999999999999999999999999999999999999999888
Q ss_pred -HHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhh
Q 009229 222 -FSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRG 293 (539)
Q Consensus 222 -F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s 293 (539)
|++||.||+|+|+.+|+..+++.+....+..... -...-.+..+.++|..+|.|++|.||++||...
T Consensus 105 ~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~-----~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 105 AFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP-----EDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred hheeecCCCCceEcHHHHHHHHHHHHHHcccccCC-----cccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 9999999999999999999999887765542211 112234556899999999999999999999843
No 7
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.60 E-value=9.7e-15 Score=135.35 Aligned_cols=135 Identities=19% Similarity=0.393 Sum_probs=108.8
Q ss_pred HHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcC
Q 009229 269 VIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGN 348 (539)
Q Consensus 269 vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~ 348 (539)
.++++|..+|++++|+|+..||. .++..++...++.++..+++ ++|.|++|.|
T Consensus 9 el~~~F~~fD~d~~G~i~~~el~--~~lr~lg~~~t~~el~~~~~---------------~~D~dg~g~I---------- 61 (151)
T KOG0027|consen 9 ELKEAFQLFDKDGDGKISVEELG--AVLRSLGQNPTEEELRDLIK---------------EIDLDGDGTI---------- 61 (151)
T ss_pred HHHHHHHHHCCCCCCcccHHHHH--HHHHHcCCCCCHHHHHHHHH---------------HhCCCCCCeE----------
Confidence 37899999999999999999999 78999998888888888888 7777776555
Q ss_pred CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCC-----CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHH
Q 009229 349 HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDK-----SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQ 423 (539)
Q Consensus 349 ~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~-----~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~ 423 (539)
+|.||+..+...... .....++.+|++||.||||+||..||+.++...
T Consensus 62 ---------------------------~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~l 114 (151)
T KOG0027|consen 62 ---------------------------DFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSL 114 (151)
T ss_pred ---------------------------cHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHh
Confidence 566666555443221 235689999999999999999999999988654
Q ss_pred HHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhccc
Q 009229 424 LHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKL 466 (539)
Q Consensus 424 ~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~ 466 (539)
...+ + .+.+.+|+..+|.++||.|+|++|.+++.
T Consensus 115 g~~~--------~-~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 115 GEKL--------T-DEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred CCcC--------C-HHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 3332 2 45679999999999999999999998754
No 8
>PTZ00183 centrin; Provisional
Probab=99.47 E-value=3.7e-13 Score=124.14 Aligned_cols=136 Identities=16% Similarity=0.186 Sum_probs=105.5
Q ss_pred HHHHHhhhhhcccCCCCCccchhhHhhhc---CCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhc-cCCCchH
Q 009229 319 HFYVIYCKFWELDTDHDFLIDKENLIRYG---NHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSE-EDKSSEP 394 (539)
Q Consensus 319 hf~~iy~~F~~lD~D~dG~Is~~ef~~~~---~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~-~~~~~~~ 394 (539)
....+...|..+|.+++|.|+.+||.... +..++...+..+|. .+|.+++|.|+|.||+..+... .......
T Consensus 15 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~----~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~ 90 (158)
T PTZ00183 15 QKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIA----DVDKDGSGKIDFEEFLDIMTKKLGERDPRE 90 (158)
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHH----HhCCCCCCcEeHHHHHHHHHHHhcCCCcHH
Confidence 33445556778999999999999997643 23455556666665 4589999999999999877653 3345567
Q ss_pred HHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccc
Q 009229 395 SLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLS 467 (539)
Q Consensus 395 ~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~ 467 (539)
.++.+|+.+|.|++|.|+..|+..++..... .++ ++.+++++..++.+++|.|++++|+++...
T Consensus 91 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~--------~l~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 91 EILKAFRLFDDDKTGKISLKNLKRVAKELGE--------TIT-DEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC--------CCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 8999999999999999999999988854321 122 355789999999999999999999987543
No 9
>PTZ00184 calmodulin; Provisional
Probab=99.47 E-value=6.2e-13 Score=120.96 Aligned_cols=138 Identities=17% Similarity=0.263 Sum_probs=107.4
Q ss_pred cchhHHHHHhhhhhcccCCCCCccchhhHhhhc---CCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhcc-CC
Q 009229 315 FSYEHFYVIYCKFWELDTDHDFLIDKENLIRYG---NHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEE-DK 390 (539)
Q Consensus 315 FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~---~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~-~~ 390 (539)
++.++...++..|..+|.+++|.|+.++|.... +...+...+.++|. .+|.+++|.|+|++|+.++.... ..
T Consensus 5 ~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~----~~d~~~~g~i~~~ef~~~l~~~~~~~ 80 (149)
T PTZ00184 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN----EVDADGNGTIDFPEFLTLMARKMKDT 80 (149)
T ss_pred cCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHH----hcCcCCCCcCcHHHHHHHHHHhccCC
Confidence 344555566677889999999999999998643 33345556666665 46899999999999999887643 23
Q ss_pred CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 391 SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 391 ~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
.....++.+|+.+|.|++|+|+..|+..++... |.. ++ +..+..++..+|.+++|+|+++||..+.
T Consensus 81 ~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-------~~~-~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 81 DSEEEIKEAFKVFDRDGNGFISAAELRHVMTNL-------GEK-LT-DEEVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred cHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH-------CCC-CC-HHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 456788999999999999999999999888542 221 12 3567889999999999999999998764
No 10
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.46 E-value=1e-12 Score=121.79 Aligned_cols=133 Identities=17% Similarity=0.286 Sum_probs=110.5
Q ss_pred HHHhhhccCCCCceeHHHHHHHHHhcCC-CCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHH
Q 009229 185 ALFRKIDVNNTGLVTRDAFVDYWVNGSM-LTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQE 263 (539)
Q Consensus 185 ~LF~~~D~d~~G~Is~~ef~~~~~~~~~-~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~ 263 (539)
.+|..||.+++|.|+..+|...++.++. .+..+...++..+|.+++|.|++++|..++...........
T Consensus 12 ~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~---------- 81 (151)
T KOG0027|consen 12 EAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE---------- 81 (151)
T ss_pred HHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc----------
Confidence 5899999999999999999999888654 57788899999999999999999999999985433211110
Q ss_pred hhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhH
Q 009229 264 RYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENL 343 (539)
Q Consensus 264 ~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef 343 (539)
.....+.++|..+|++++|+|+..||+ .++..++...+.+++..+++ ..|.|+||.|+.++|
T Consensus 82 -~~~~el~eaF~~fD~d~~G~Is~~el~--~~l~~lg~~~~~~e~~~mi~---------------~~d~d~dg~i~f~ef 143 (151)
T KOG0027|consen 82 -ASSEELKEAFRVFDKDGDGFISASELK--KVLTSLGEKLTDEECKEMIR---------------EVDVDGDGKVNFEEF 143 (151)
T ss_pred -ccHHHHHHHHHHHccCCCCcCcHHHHH--HHHHHhCCcCCHHHHHHHHH---------------hcCCCCCCeEeHHHH
Confidence 123358999999999999999999999 89999999988899999998 888888877765555
Q ss_pred hh
Q 009229 344 IR 345 (539)
Q Consensus 344 ~~ 345 (539)
.+
T Consensus 144 ~~ 145 (151)
T KOG0027|consen 144 VK 145 (151)
T ss_pred HH
Confidence 44
No 11
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.42 E-value=2.2e-12 Score=119.58 Aligned_cols=127 Identities=20% Similarity=0.341 Sum_probs=108.0
Q ss_pred HHhhhccCCCCceeHHHHHHHHHhcCC-CCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHh
Q 009229 186 LFRKIDVNNTGLVTRDAFVDYWVNGSM-LTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQER 264 (539)
Q Consensus 186 LF~~~D~d~~G~Is~~ef~~~~~~~~~-~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~ 264 (539)
.|..+|.|++|.|+.++|.++++.++. .+..++.++|+.+|. |.++|++.+|..++...+....
T Consensus 25 aF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~-------------- 89 (160)
T COG5126 25 AFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD-------------- 89 (160)
T ss_pred HHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC--------------
Confidence 788899999999999999999988654 566788999999999 9999999999999985433211
Q ss_pred hHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHh
Q 009229 265 YAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLI 344 (539)
Q Consensus 265 y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~ 344 (539)
.+..+..+|..+|++++|+|+..+|+ .++..++...++++++++++ .+|+|+||.|+.++|.
T Consensus 90 -~~Eel~~aF~~fD~d~dG~Is~~eL~--~vl~~lge~~~deev~~ll~---------------~~d~d~dG~i~~~eF~ 151 (160)
T COG5126 90 -KEEELREAFKLFDKDHDGYISIGELR--RVLKSLGERLSDEEVEKLLK---------------EYDEDGDGEIDYEEFK 151 (160)
T ss_pred -cHHHHHHHHHHhCCCCCceecHHHHH--HHHHhhcccCCHHHHHHHHH---------------hcCCCCCceEeHHHHH
Confidence 12348899999999999999999999 78999999989999999999 8899988888877776
Q ss_pred h
Q 009229 345 R 345 (539)
Q Consensus 345 ~ 345 (539)
+
T Consensus 152 ~ 152 (160)
T COG5126 152 K 152 (160)
T ss_pred H
Confidence 5
No 12
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.41 E-value=1.4e-12 Score=130.99 Aligned_cols=211 Identities=18% Similarity=0.292 Sum_probs=148.6
Q ss_pred HHHHhhhccCCCCceeHHHHHHHHHhcC-CCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCccccc--CChH
Q 009229 184 TALFRKIDVNNTGLVTRDAFVDYWVNGS-MLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQ--STPE 260 (539)
Q Consensus 184 ~~LF~~~D~d~~G~Is~~ef~~~~~~~~-~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~--~~~e 260 (539)
..||.++|.+++|+|+..++..||.... +....++.+-+..+|.+.+|.|++++..+....... +..++.. .+..
T Consensus 80 ~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~--~~~~~~d~e~~~~ 157 (325)
T KOG4223|consen 80 GKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVD--LPDEFPDEEDNEE 157 (325)
T ss_pred HHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhccc--CccccccchhcHH
Confidence 3588999999999999999999987633 334456677788899999999999999998875543 2222222 1222
Q ss_pred HHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccch
Q 009229 261 FQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDK 340 (539)
Q Consensus 261 f~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~ 340 (539)
++.. ..-=.+-|...|.|++|.+|+.||. .|+. .++.-.|.. .||...-..+|+|+||.|+.
T Consensus 158 ~~km--~~rDe~rFk~AD~d~dg~lt~EEF~--aFLH-------PEe~p~M~~-------iVi~Etl~d~Dkn~DG~I~~ 219 (325)
T KOG4223|consen 158 YKKM--IARDEERFKAADQDGDGSLTLEEFT--AFLH-------PEEHPHMKD-------IVIAETLEDIDKNGDGKISL 219 (325)
T ss_pred HHHH--HHHHHHHHhhcccCCCCcccHHHHH--hccC-------hhhcchHHH-------HHHHHHHhhcccCCCCceeH
Confidence 2221 1113468999999999999999997 3432 111111111 12222333899999999999
Q ss_pred hhHhh--hcCCC---cc---hHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCcee
Q 009229 341 ENLIR--YGNHA---LT---YRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVIT 412 (539)
Q Consensus 341 ~ef~~--~~~~~---ls---~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is 412 (539)
+||.. |.... -+ -...+++++ -.|.|+||+++=.|...+++...........++++-..|.|+||.||
T Consensus 220 eEfigd~~~~~~~~~epeWv~~Ere~F~~----~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs 295 (325)
T KOG4223|consen 220 EEFIGDLYSHEGNEEEPEWVLTEREQFFE----FRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLS 295 (325)
T ss_pred HHHHhHHhhccCCCCCcccccccHHHHHH----HhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCcccccc
Confidence 99985 32221 01 112334444 35999999999999998887766556678889999999999999999
Q ss_pred HHHHHH
Q 009229 413 RNEMQF 418 (539)
Q Consensus 413 ~~El~~ 418 (539)
.+||..
T Consensus 296 ~eEIl~ 301 (325)
T KOG4223|consen 296 KEEILE 301 (325)
T ss_pred HHHHhh
Confidence 999975
No 13
>PTZ00183 centrin; Provisional
Probab=99.35 E-value=5.3e-12 Score=116.40 Aligned_cols=132 Identities=18% Similarity=0.295 Sum_probs=108.0
Q ss_pred HHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcC
Q 009229 269 VIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGN 348 (539)
Q Consensus 269 vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~ 348 (539)
.+.++|..+|.+++|.|+..||. .++..++.......+..++. .+|.+++|.|+.++|.....
T Consensus 18 ~~~~~F~~~D~~~~G~i~~~e~~--~~l~~~g~~~~~~~~~~l~~---------------~~d~~~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 18 EIREAFDLFDTDGSGTIDPKELK--VAMRSLGFEPKKEEIKQMIA---------------DVDKDGSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHhCCCCCCcccHHHHH--HHHHHhCCCCCHHHHHHHHH---------------HhCCCCCCcEeHHHHHHHHH
Confidence 47889999999999999999998 67777765455566777777 88999999999999987432
Q ss_pred ----CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHH
Q 009229 349 ----HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYE 421 (539)
Q Consensus 349 ----~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~ 421 (539)
.......+..+|. .+|.+++|.|+.+||..++.......+...++.+|..+|.|++|.|+.+|+..++.
T Consensus 81 ~~~~~~~~~~~l~~~F~----~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 153 (158)
T PTZ00183 81 KKLGERDPREEILKAFR----LFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMK 153 (158)
T ss_pred HHhcCCCcHHHHHHHHH----HhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 2233344555554 56999999999999999998766667788999999999999999999999987664
No 14
>PTZ00184 calmodulin; Provisional
Probab=99.30 E-value=2e-11 Score=110.98 Aligned_cols=131 Identities=15% Similarity=0.294 Sum_probs=106.0
Q ss_pred HHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcC
Q 009229 269 VIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGN 348 (539)
Q Consensus 269 vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~ 348 (539)
.+.++|..+|.+++|.|+..||. .++..++.....+++..+++ .+|.+++|.|+.++|..+..
T Consensus 12 ~~~~~F~~~D~~~~G~i~~~e~~--~~l~~~~~~~~~~~~~~~~~---------------~~d~~~~g~i~~~ef~~~l~ 74 (149)
T PTZ00184 12 EFKEAFSLFDKDGDGTITTKELG--TVMRSLGQNPTEAELQDMIN---------------EVDADGNGTIDFPEFLTLMA 74 (149)
T ss_pred HHHHHHHHHcCCCCCcCCHHHHH--HHHHHhCCCCCHHHHHHHHH---------------hcCcCCCCcCcHHHHHHHHH
Confidence 37789999999999999999998 67777765555667777777 88999999999999998643
Q ss_pred CC----cchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 349 HA----LTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 349 ~~----ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
.. .....+.. +++.+|.+++|.|+.++|..++.......+...++.+|+.+|.+++|.|+..|+..++
T Consensus 75 ~~~~~~~~~~~~~~----~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 75 RKMKDTDSEEEIKE----AFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred HhccCCcHHHHHHH----HHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 22 22223334 4456799999999999999999876555677889999999999999999999998665
No 15
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=6.1e-11 Score=108.11 Aligned_cols=134 Identities=19% Similarity=0.340 Sum_probs=106.7
Q ss_pred HHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcC
Q 009229 269 VIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGN 348 (539)
Q Consensus 269 vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~ 348 (539)
.++..|..+|.+++|+|...||+ ..+..++.-...++|++++. ..|+++.
T Consensus 34 ~i~e~f~lfd~~~~g~iD~~EL~--vAmralGFE~~k~ei~kll~---------------d~dk~~~------------- 83 (172)
T KOG0028|consen 34 EIKEAFELFDPDMAGKIDVEELK--VAMRALGFEPKKEEILKLLA---------------DVDKEGS------------- 83 (172)
T ss_pred hHHHHHHhhccCCCCcccHHHHH--HHHHHcCCCcchHHHHHHHH---------------hhhhccC-------------
Confidence 48889999999999999999998 56777877667788888887 5555554
Q ss_pred CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhc-cCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHh
Q 009229 349 HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSE-EDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRM 427 (539)
Q Consensus 349 ~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~-~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l 427 (539)
|+|+|++|+..+... .-+.+.+.+..+|+.+|.|++|.||..+|+...+++.+.+
T Consensus 84 ------------------------g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenl 139 (172)
T KOG0028|consen 84 ------------------------GKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENL 139 (172)
T ss_pred ------------------------ceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccc
Confidence 566677777665443 2234889999999999999999999999998776654332
Q ss_pred hhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 428 ECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 428 ~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
. +.-+.+|++.++.+++|.|+-++|.+.+
T Consensus 140 t---------D~El~eMIeEAd~d~dgevneeEF~~im 168 (172)
T KOG0028|consen 140 T---------DEELMEMIEEADRDGDGEVNEEEFIRIM 168 (172)
T ss_pred c---------HHHHHHHHHHhcccccccccHHHHHHHH
Confidence 2 3457899999999999999999998864
No 16
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=7.9e-11 Score=107.39 Aligned_cols=130 Identities=20% Similarity=0.293 Sum_probs=111.3
Q ss_pred HHhhhccCCCCceeHHHHHHHHHh-cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHh
Q 009229 186 LFRKIDVNNTGLVTRDAFVDYWVN-GSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQER 264 (539)
Q Consensus 186 LF~~~D~d~~G~Is~~ef~~~~~~-~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~ 264 (539)
.|..||.+++|.|++++|...++. +-.+...++.++...+|++|.|.|++++|...+...+.. +
T Consensus 38 ~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e---------------~ 102 (172)
T KOG0028|consen 38 AFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE---------------R 102 (172)
T ss_pred HHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc---------------c
Confidence 577778899999999999665555 446778888999999999999999999999998754332 2
Q ss_pred hHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHh
Q 009229 265 YAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLI 344 (539)
Q Consensus 265 y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~ 344 (539)
.....+.+.|..+|.+.+|+|+..+|+ .+...|+...+.+++.++++ ++|.|+||-|+.++|.
T Consensus 103 dt~eEi~~afrl~D~D~~Gkis~~~lk--rvakeLgenltD~El~eMIe---------------EAd~d~dgevneeEF~ 165 (172)
T KOG0028|consen 103 DTKEEIKKAFRLFDDDKTGKISQRNLK--RVAKELGENLTDEELMEMIE---------------EADRDGDGEVNEEEFI 165 (172)
T ss_pred CcHHHHHHHHHcccccCCCCcCHHHHH--HHHHHhCccccHHHHHHHHH---------------HhcccccccccHHHHH
Confidence 224458999999999999999999999 78899999889999999999 9999999999999998
Q ss_pred hhc
Q 009229 345 RYG 347 (539)
Q Consensus 345 ~~~ 347 (539)
++.
T Consensus 166 ~im 168 (172)
T KOG0028|consen 166 RIM 168 (172)
T ss_pred HHH
Confidence 764
No 17
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.20 E-value=4e-11 Score=107.41 Aligned_cols=155 Identities=14% Similarity=0.243 Sum_probs=109.8
Q ss_pred HhhccchhHHHHHhhhhhcccCCC-----CC------ccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHH
Q 009229 311 VLRYFSYEHFYVIYCKFWELDTDH-----DF------LIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYED 379 (539)
Q Consensus 311 i~~~FSyehf~~iy~~F~~lD~D~-----dG------~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~E 379 (539)
-..||.-++..++|.+|.+|..+- .| .+..+.+.+...-. ...+-.||.+ .|..++.|.++|.+
T Consensus 18 DCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELk-enpfk~ri~e----~FSeDG~Gnlsfdd 92 (189)
T KOG0038|consen 18 DCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELK-ENPFKRRICE----VFSEDGRGNLSFDD 92 (189)
T ss_pred ccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhh-cChHHHHHHH----HhccCCCCcccHHH
Confidence 467999999999999999987542 11 12222222111100 1223444433 46789999999999
Q ss_pred HHHHHHhccC-CCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeH
Q 009229 380 FVYFILSEED-KSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITL 458 (539)
Q Consensus 380 Fv~fl~~~~~-~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl 458 (539)
|+...+...- ....-++.|+|++||.|+|++|...+|...+..+... .++.+ ..+-++..+++++|.++||+|++
T Consensus 93 FlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~--eLs~e--Ev~~i~ekvieEAD~DgDgkl~~ 168 (189)
T KOG0038|consen 93 FLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD--ELSDE--EVELICEKVIEEADLDGDGKLSF 168 (189)
T ss_pred HHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc--cCCHH--HHHHHHHHHHHHhcCCCCCcccH
Confidence 9998877643 3446789999999999999999999999887654321 12222 23457788999999999999999
Q ss_pred HHHhhcc-cchhHHHhh
Q 009229 459 RDLKGCK-LSGSVFNIL 474 (539)
Q Consensus 459 ~Df~~~~-~~~~~~n~l 474 (539)
.||..+. .+..|++++
T Consensus 169 ~eFe~~i~raPDFlsTF 185 (189)
T KOG0038|consen 169 AEFEHVILRAPDFLSTF 185 (189)
T ss_pred HHHHHHHHhCcchHhhh
Confidence 9999975 677788764
No 18
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.09 E-value=6.2e-10 Score=114.99 Aligned_cols=145 Identities=22% Similarity=0.341 Sum_probs=115.0
Q ss_pred HHhhhhhcccCCCCCccchhhHhh---hcCCC-cchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHH
Q 009229 322 VIYCKFWELDTDHDFLIDKENLIR---YGNHA-LTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLE 397 (539)
Q Consensus 322 ~iy~~F~~lD~D~dG~Is~~ef~~---~~~~~-ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~ 397 (539)
+|-|.|.++|.+++|.++..++.+ ...+. .....+..+|+ ..|.|.||.+||.||..++.. .+..+.
T Consensus 15 r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~----~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~ 85 (463)
T KOG0036|consen 15 RIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFS----AMDANRDGRVDYSEFKRYLDN-----KELELY 85 (463)
T ss_pred HHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHH----hcccCcCCcccHHHHHHHHHH-----hHHHHH
Confidence 466777799999999999999985 33444 45566666665 459999999999999999976 467899
Q ss_pred HHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccchhHHHhhcch
Q 009229 398 YWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSGSVFNILFNL 477 (539)
Q Consensus 398 ~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~~~~~n~l~n~ 477 (539)
..|..+|++.||.|...||...+++.. +. ++.+. +..++..+|+++.+.|+++|+....+-.. ...+-|+
T Consensus 86 ~~F~~iD~~hdG~i~~~Ei~~~l~~~g-------i~-l~de~-~~k~~e~~d~~g~~~I~~~e~rd~~ll~p-~s~i~di 155 (463)
T KOG0036|consen 86 RIFQSIDLEHDGKIDPNEIWRYLKDLG-------IQ-LSDEK-AAKFFEHMDKDGKATIDLEEWRDHLLLYP-ESDLEDI 155 (463)
T ss_pred HHHhhhccccCCccCHHHHHHHHHHhC-------Cc-cCHHH-HHHHHHHhccCCCeeeccHHHHhhhhcCC-hhHHHHH
Confidence 999999999999999999999887643 33 33333 57799999999999999999999865544 4446777
Q ss_pred HHhhhhhc
Q 009229 478 NKFMAFET 485 (539)
Q Consensus 478 ~kf~~~E~ 485 (539)
..||.|-.
T Consensus 156 ~~~W~h~~ 163 (463)
T KOG0036|consen 156 YDFWRHVL 163 (463)
T ss_pred HHhhhhhe
Confidence 77777754
No 19
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.09 E-value=4.7e-10 Score=108.46 Aligned_cols=215 Identities=17% Similarity=0.314 Sum_probs=148.5
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHH
Q 009229 219 TQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDA 298 (539)
Q Consensus 219 ~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~ 298 (539)
..+|+..|.+.+|.|+..++..+|..-.+.|- ++. ...-.-.|..+|.+++|.|+|+|++. .|+..
T Consensus 104 mviFsKvDVNtDrkisAkEmqrwImektaEHf-----------qea--meeSkthFraVDpdgDGhvsWdEykv-kFlas 169 (362)
T KOG4251|consen 104 MVIFSKVDVNTDRKISAKEMQRWIMEKTAEHF-----------QEA--MEESKTHFRAVDPDGDGHVSWDEYKV-KFLAS 169 (362)
T ss_pred HHHHhhcccCccccccHHHHHHHHHHHHHHHH-----------HHH--HhhhhhheeeeCCCCCCceehhhhhh-HHHhh
Confidence 45577788888888888888888875433331 111 11233467788888888888888873 34443
Q ss_pred hhhhccH--------------HHHHHHhhccchhHHHHHhhhhhcccC-CCCCccchhhHhhhcCCCcchHHHHHHHhcc
Q 009229 299 MQHADEE--------------EDINKVLRYFSYEHFYVIYCKFWELDT-DHDFLIDKENLIRYGNHALTYRIVDRIFSQV 363 (539)
Q Consensus 299 l~~~~~e--------------edi~~i~~~FSyehf~~iy~~F~~lD~-D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~ 363 (539)
-++...+ ++.+.+. ..+..++..+|. -.|..++.+||..|.....+..++--+...+
T Consensus 170 kghsekevadairlneelkVDeEtqevl--------enlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkei 241 (362)
T KOG4251|consen 170 KGHSEKEVADAIRLNEELKVDEETQEVL--------ENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEI 241 (362)
T ss_pred cCcchHHHHHHhhccCcccccHHHHHHH--------HhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHH
Confidence 3322110 1111111 134445556665 4577888899999988888888888888888
Q ss_pred ccccccCCCCcccHHHHHHHHHhccCC---------CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCC
Q 009229 364 PRKFTSKVEGKMGYEDFVYFILSEEDK---------SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEP 434 (539)
Q Consensus 364 ~r~~D~~~dG~Idf~EFv~fl~~~~~~---------~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~ 434 (539)
++..|+|+|..++-.||+......-.. ......+.+=..+|.+.||.+|..||..+...|..++..
T Consensus 242 vrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~al----- 316 (362)
T KOG4251|consen 242 VRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLAL----- 316 (362)
T ss_pred HHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhH-----
Confidence 999999999999999999765432111 113345555568999999999999999987766655421
Q ss_pred CcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 435 VLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 435 ~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
..+.+|+...+.+++.+++++++.+-
T Consensus 317 ----ne~~~~ma~~d~n~~~~Ls~eell~r 342 (362)
T KOG4251|consen 317 ----NEVNDIMALTDANNDEKLSLEELLER 342 (362)
T ss_pred ----HHHHHHHhhhccCCCcccCHHHHHHH
Confidence 33578888889999999999998763
No 20
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.08 E-value=3.6e-09 Score=101.46 Aligned_cols=146 Identities=18% Similarity=0.322 Sum_probs=113.2
Q ss_pred HHhhhccCCCCceeHHHHHHHHHhcC--CCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHH
Q 009229 186 LFRKIDVNNTGLVTRDAFVDYWVNGS--MLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQE 263 (539)
Q Consensus 186 LF~~~D~d~~G~Is~~ef~~~~~~~~--~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~ 263 (539)
.|...|+|+.|+|+.+|+...+.+.. .-+.+...-|+.++|.++.|.|.++||+.+-+.+ +
T Consensus 62 ~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i----------~------- 124 (221)
T KOG0037|consen 62 WFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI----------N------- 124 (221)
T ss_pred HHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH----------H-------
Confidence 78899999999999999999988533 3455666677999999999999999999887633 1
Q ss_pred hhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhH
Q 009229 264 RYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENL 343 (539)
Q Consensus 264 ~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef 343 (539)
-=+.+|..+|+|++|+|+..||+ +.+..++-..+++-++.+++ ++|.
T Consensus 125 -----~Wr~vF~~~D~D~SG~I~~sEL~--~Al~~~Gy~Lspq~~~~lv~---------------kyd~----------- 171 (221)
T KOG0037|consen 125 -----QWRNVFRTYDRDRSGTIDSSELR--QALTQLGYRLSPQFYNLLVR---------------KYDR----------- 171 (221)
T ss_pred -----HHHHHHHhcccCCCCcccHHHHH--HHHHHcCcCCCHHHHHHHHH---------------Hhcc-----------
Confidence 14678999999999999999999 78888888777665565555 3332
Q ss_pred hhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeH
Q 009229 344 IRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITR 413 (539)
Q Consensus 344 ~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~ 413 (539)
..+|.|.|.+|+..|.. ...+-.+||.+|.+.+|.|+.
T Consensus 172 --------------------------~~~g~i~FD~FI~ccv~------L~~lt~~Fr~~D~~q~G~i~~ 209 (221)
T KOG0037|consen 172 --------------------------FGGGRIDFDDFIQCCVV------LQRLTEAFRRRDTAQQGSITI 209 (221)
T ss_pred --------------------------ccCCceeHHHHHHHHHH------HHHHHHHHHHhccccceeEEE
Confidence 33577778888777765 345667788888888887753
No 21
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.05 E-value=2.9e-09 Score=96.65 Aligned_cols=126 Identities=15% Similarity=0.196 Sum_probs=105.8
Q ss_pred HhhhhhcccCCCCCccchhhHhhh---cCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhc-cCCCchHHHHH
Q 009229 323 IYCKFWELDTDHDFLIDKENLIRY---GNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSE-EDKSSEPSLEY 398 (539)
Q Consensus 323 iy~~F~~lD~D~dG~Is~~ef~~~---~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~-~~~~~~~~i~~ 398 (539)
+...|.-+|.|+||.|+++||... .+...+...++.++.+. .|.|+|.-|+...-.. .....+..|..
T Consensus 34 fKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea--------~gPINft~FLTmfGekL~gtdpe~~I~~ 105 (171)
T KOG0031|consen 34 FKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA--------PGPINFTVFLTMFGEKLNGTDPEEVILN 105 (171)
T ss_pred HHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC--------CCCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence 344666899999999999999873 34557888999999876 4999999999877543 34456788999
Q ss_pred HHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 399 WFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 399 ~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
+|++||.+|+|.|..+.|+.++..+..++.. +.|++|++.+-++..|.|.|..|....
T Consensus 106 AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~---------eEV~~m~r~~p~d~~G~~dy~~~~~~i 163 (171)
T KOG0031|consen 106 AFKTFDDEGSGKIDEDYLRELLTTMGDRFTD---------EEVDEMYREAPIDKKGNFDYKAFTYII 163 (171)
T ss_pred HHHhcCccCCCccCHHHHHHHHHHhcccCCH---------HHHHHHHHhCCcccCCceeHHHHHHHH
Confidence 9999999999999999999999888877642 557999999999999999999998754
No 22
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.01 E-value=3.9e-09 Score=109.15 Aligned_cols=107 Identities=21% Similarity=0.315 Sum_probs=82.8
Q ss_pred HHHHhhhccCCCCceeHHHHHHHHHhcCCC--CHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHH
Q 009229 184 TALFRKIDVNNTGLVTRDAFVDYWVNGSML--TMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEF 261 (539)
Q Consensus 184 ~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~--~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef 261 (539)
..||..+|.+++|.|+.+++...+..+... ....+..+|+..|.|.+|.++++||..++++-
T Consensus 17 ~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~---------------- 80 (463)
T KOG0036|consen 17 RCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK---------------- 80 (463)
T ss_pred HHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh----------------
Confidence 358999999999999999999887775443 33445666899999999999999999998831
Q ss_pred HHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhh
Q 009229 262 QERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLR 313 (539)
Q Consensus 262 ~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~ 313 (539)
+..+.++|..+|.+.+|+|...|+. ..+..++...++++.+++++
T Consensus 81 -----E~~l~~~F~~iD~~hdG~i~~~Ei~--~~l~~~gi~l~de~~~k~~e 125 (463)
T KOG0036|consen 81 -----ELELYRIFQSIDLEHDGKIDPNEIW--RYLKDLGIQLSDEKAAKFFE 125 (463)
T ss_pred -----HHHHHHHHhhhccccCCccCHHHHH--HHHHHhCCccCHHHHHHHHH
Confidence 2237889999999999999999998 56776666555566665555
No 23
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.91 E-value=2.6e-08 Score=95.58 Aligned_cols=158 Identities=14% Similarity=0.121 Sum_probs=126.3
Q ss_pred HHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhh-hhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhh
Q 009229 267 ETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQ-HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIR 345 (539)
Q Consensus 267 ~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~-~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~ 345 (539)
...+...|..+|++++|+|+.+||. ..+.... .-...+.+.-++. .+|.|++|.|..+||..
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq--~aLsn~~~~~Fs~~TcrlmI~---------------mfd~~~~G~i~f~EF~~ 118 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQ--QALSNGTWSPFSIETCRLMIS---------------MFDRDNSGTIGFKEFKA 118 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHH--HHhhcCCCCCCCHHHHHHHHH---------------HhcCCCCCccCHHHHHH
Confidence 4468899999999999999999998 5555322 2244566777777 88999999999999975
Q ss_pred hcCCCcchHHHHHH--HhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHH
Q 009229 346 YGNHALTYRIVDRI--FSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQ 423 (539)
Q Consensus 346 ~~~~~ls~~~i~ri--f~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~ 423 (539)
. ...| |..+++.+|.|+.|+|+..|+...+......-+++.++.+++.||.-++|.|..+++-.++.-.
T Consensus 119 L---------w~~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L 189 (221)
T KOG0037|consen 119 L---------WKYINQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL 189 (221)
T ss_pred H---------HHHHHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH
Confidence 3 1222 4556778999999999999999999999888899999999999999999999999988776432
Q ss_pred HHHhhhccCCCCcHHHHHHHHHHhhCCCCCCce--eHHHHhhcc
Q 009229 424 LHRMECMAQEPVLFEDILCQIIDMIGPENQSYI--TLRDLKGCK 465 (539)
Q Consensus 424 ~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~I--Tl~Df~~~~ 465 (539)
..+.+.|...|++.+|.| +|+||..+.
T Consensus 190 ---------------~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 190 ---------------QRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ---------------HHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 224677888898888875 568887754
No 24
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.88 E-value=3.8e-08 Score=94.23 Aligned_cols=129 Identities=22% Similarity=0.362 Sum_probs=84.1
Q ss_pred HHHHhCCC-CCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCc-ccHHHhhhhhHHHH
Q 009229 221 IFSILNQP-DLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGH-LSLRELKRGNLIDA 298 (539)
Q Consensus 221 ~F~llD~d-g~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~-It~~El~~s~~l~~ 298 (539)
.|..++.+ ++|+|+.++|..+.. +... | ...||+..++.+++|. |+..++. +.+..
T Consensus 38 rF~kl~~~~~~g~lt~eef~~i~~--~~~N---------p---------~~~rI~~~f~~~~~~~~v~F~~Fv--~~ls~ 95 (187)
T KOG0034|consen 38 RFKKLDRNNGDGYLTKEEFLSIPE--LALN---------P---------LADRIIDRFDTDGNGDPVDFEEFV--RLLSV 95 (187)
T ss_pred HHHHhccccccCccCHHHHHHHHH--HhcC---------c---------HHHHHHHHHhccCCCCccCHHHHH--HHHhh
Confidence 37778888 999999999999873 1111 1 1678888899998888 9999998 56666
Q ss_pred hhhhccHH-HHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhc----CCCcc--hHHHHHHHhccccccccCC
Q 009229 299 MQHADEEE-DINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYG----NHALT--YRIVDRIFSQVPRKFTSKV 371 (539)
Q Consensus 299 l~~~~~ee-di~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~----~~~ls--~~~i~rif~~~~r~~D~~~ 371 (539)
+....... .+.- .|.-+|.+++|.|+++|+.... ....+ ...+..|.+.++..+|.++
T Consensus 96 f~~~~~~~~Kl~f---------------aF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~ 160 (187)
T KOG0034|consen 96 FSPKASKREKLRF---------------AFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDG 160 (187)
T ss_pred hcCCccHHHHHHH---------------HHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCC
Confidence 55443332 2222 3448899999999999998632 11122 3444444444444456666
Q ss_pred CCcccHHHHHHHHHh
Q 009229 372 EGKMGYEDFVYFILS 386 (539)
Q Consensus 372 dG~Idf~EFv~fl~~ 386 (539)
||+|+|+||..++..
T Consensus 161 DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 161 DGKISFEEFCKVVEK 175 (187)
T ss_pred CCcCcHHHHHHHHHc
Confidence 666666666665543
No 25
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.86 E-value=3.5e-08 Score=88.28 Aligned_cols=114 Identities=16% Similarity=0.224 Sum_probs=91.9
Q ss_pred HHHhhhccCCCCceeHHHHHHHHHhcC-CCCHHHHHHHHHHhCCC--CCCCCCHHHHHHHHHHHHhcCCCcccccCChHH
Q 009229 185 ALFRKIDVNNTGLVTRDAFVDYWVNGS-MLTMDTATQIFSILNQP--DLKYLTQEDFKPVLRELLATHPGLEFLQSTPEF 261 (539)
Q Consensus 185 ~LF~~~D~d~~G~Is~~ef~~~~~~~~-~~~~de~~~~F~llD~d--g~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef 261 (539)
.+|..||..++|.|+..+....++.++ .++..++.+....++.+ +-..|++++|.++++.+-....+
T Consensus 15 e~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q---------- 84 (152)
T KOG0030|consen 15 EAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ---------- 84 (152)
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc----------
Confidence 489999999999999999999998866 45666778887777766 55789999999999977544221
Q ss_pred HHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhh
Q 009229 262 QERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLR 313 (539)
Q Consensus 262 ~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~ 313 (539)
+.-....+-+..+|+.++|.|...||+ .+|..+++..+++++.+++.
T Consensus 85 ---~t~edfvegLrvFDkeg~G~i~~aeLR--hvLttlGekl~eeEVe~Lla 131 (152)
T KOG0030|consen 85 ---GTYEDFVEGLRVFDKEGNGTIMGAELR--HVLTTLGEKLTEEEVEELLA 131 (152)
T ss_pred ---CcHHHHHHHHHhhcccCCcceeHHHHH--HHHHHHHhhccHHHHHHHHc
Confidence 112224567788899999999999999 89999999999998887766
No 26
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.78 E-value=1e-07 Score=85.25 Aligned_cols=138 Identities=14% Similarity=0.269 Sum_probs=98.9
Q ss_pred HHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhc
Q 009229 268 TVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYG 347 (539)
Q Consensus 268 ~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~ 347 (539)
...+.||..+|+.++|+|+..+.- ..+..++...++.++.+.+. +.+.+.-
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~g--dvlRalG~nPT~aeV~k~l~---------------~~~~~~~------------ 61 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVG--DVLRALGQNPTNAEVLKVLG---------------QPKRREM------------ 61 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHH--HHHHHhcCCCcHHHHHHHHc---------------Ccccchh------------
Confidence 347889999999999999999997 88999999999999988877 4444411
Q ss_pred CCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhcc---CCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHH
Q 009229 348 NHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEE---DKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQL 424 (539)
Q Consensus 348 ~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~---~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~ 424 (539)
+-.+|+|++|+-.+.+.. ...+-+..-.-.|+||++|+|.|...||+..+..+.
T Consensus 62 -----------------------~~~rl~FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlG 118 (152)
T KOG0030|consen 62 -----------------------NVKRLDFEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLG 118 (152)
T ss_pred -----------------------hhhhhhHHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHH
Confidence 012444555554443321 112222233335789999999999999999998887
Q ss_pred HHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccc
Q 009229 425 HRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLS 467 (539)
Q Consensus 425 ~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~ 467 (539)
++|.. +.+.+++.-. .|.+|.|.|++|.+..++
T Consensus 119 ekl~e---------eEVe~Llag~-eD~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 119 EKLTE---------EEVEELLAGQ-EDSNGCINYEAFVKHIMS 151 (152)
T ss_pred hhccH---------HHHHHHHccc-cccCCcCcHHHHHHHHhc
Confidence 77653 4467776554 477899999999986544
No 27
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.76 E-value=5.4e-08 Score=101.45 Aligned_cols=234 Identities=13% Similarity=0.239 Sum_probs=142.0
Q ss_pred CCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCccc-----ccCChHHHHhhHH
Q 009229 193 NNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEF-----LQSTPEFQERYAE 267 (539)
Q Consensus 193 d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~f-----L~~~~ef~~~y~~ 267 (539)
+.+|-||+.+.+-.+..+. .++-.-.-.|..+|.||+|-|+.+||....+ ++.+...+.. ......+. --++
T Consensus 211 g~~GLIsfSdYiFLlTlLS-~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~-li~sQ~~~g~~hrd~~tt~~s~~-~~~n 287 (489)
T KOG2643|consen 211 GESGLISFSDYIFLLTLLS-IPERNFRIAFKMFDLDGNGEIDKEEFETVQQ-LIRSQTSVGVRHRDHFTTGNSFK-VEVN 287 (489)
T ss_pred CCCCeeeHHHHHHHHHHHc-cCcccceeeeeeeecCCCCcccHHHHHHHHH-HHHhccccceecccCccccceeh-hhhh
Confidence 4689999999876665433 2322222228999999999999999998765 3332221111 00000111 0111
Q ss_pred HHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhc
Q 009229 268 TVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYG 347 (539)
Q Consensus 268 ~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~ 347 (539)
+. -+-+.+.++++|++++++|. .|+..|.+ +|.++ .|..+|....|.|+..+|.+..
T Consensus 288 sa--L~~yFFG~rg~~kLs~deF~--~F~e~Lq~-----Eil~l--------------EF~~~~~~~~g~Ise~DFA~~l 344 (489)
T KOG2643|consen 288 SA--LLTYFFGKRGNGKLSIDEFL--KFQENLQE-----EILEL--------------EFERFDKGDSGAISEVDFAELL 344 (489)
T ss_pred hh--HHHHhhccCCCccccHHHHH--HHHHHHHH-----HHHHH--------------HHHHhCcccccccCHHHHHHHH
Confidence 12 34556788999999999999 77776643 23322 2447888888999999999732
Q ss_pred -CCC-cchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHH
Q 009229 348 -NHA-LTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLH 425 (539)
Q Consensus 348 -~~~-ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~ 425 (539)
..+ .+..-.+.+...+.+.|+.. +-.|++.||..|..-..+...-+..-.+|. ...+-|+..+|+......
T Consensus 345 L~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~----~Ag~~i~~~~f~raa~~v-- 417 (489)
T KOG2643|consen 345 LAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNNLNDFDIALRFYH----MAGASIDEKTFQRAAKVV-- 417 (489)
T ss_pred HHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHHHH----HcCCCCCHHHHHHHHHHh--
Confidence 111 12222222223333344444 668999999998765544333222222232 256788999988755422
Q ss_pred HhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 426 RMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 426 ~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
-|++- + +.+++-+|...|.|+||.|+.+||...+
T Consensus 418 ----tGveL-S-dhVvdvvF~IFD~N~Dg~LS~~EFl~Vm 451 (489)
T KOG2643|consen 418 ----TGVEL-S-DHVVDVVFTIFDENNDGTLSHKEFLAVM 451 (489)
T ss_pred ----cCccc-c-cceeeeEEEEEccCCCCcccHHHHHHHH
Confidence 23331 1 2467778888999999999999998753
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.73 E-value=2.1e-08 Score=79.28 Aligned_cols=65 Identities=20% Similarity=0.302 Sum_probs=53.2
Q ss_pred HHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 395 SLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 395 ~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
.++.+|+.+|.|+||+|+.+||..++......+. .-..++.+.+++..+|++++|.|+++||.++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~-----~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~ 65 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMS-----DEESDEMIDQIFREFDTDGDGRISFDEFLNF 65 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST-----HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccccc-----HHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence 3789999999999999999999999876543221 1123567889999999999999999999864
No 29
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.53 E-value=1.6e-06 Score=90.69 Aligned_cols=156 Identities=15% Similarity=0.228 Sum_probs=86.1
Q ss_pred hCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhcc
Q 009229 225 LNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADE 304 (539)
Q Consensus 225 lD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~ 304 (539)
+-.++++.|+.++|..++..+ .+.++.--|..+|+..+|.|+-.+|. .++-.......
T Consensus 295 FG~rg~~kLs~deF~~F~e~L--------------------q~Eil~lEF~~~~~~~~g~Ise~DFA--~~lL~~a~~n~ 352 (489)
T KOG2643|consen 295 FGKRGNGKLSIDEFLKFQENL--------------------QEEILELEFERFDKGDSGAISEVDFA--ELLLAYAGVNS 352 (489)
T ss_pred hccCCCccccHHHHHHHHHHH--------------------HHHHHHHHHHHhCcccccccCHHHHH--HHHHHHcccch
Confidence 457777777777777776643 12234455777777777777777776 34444443322
Q ss_pred HH---HHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcCC--Ccch-HHHHHHHhccccccccCCCCcccHH
Q 009229 305 EE---DINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNH--ALTY-RIVDRIFSQVPRKFTSKVEGKMGYE 378 (539)
Q Consensus 305 ee---di~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~~--~ls~-~~i~rif~~~~r~~D~~~dG~Idf~ 378 (539)
+. ..+.+.+ +++.+ +--||.+|++.|... .+++ ...-+.+. .-.+.|+-.
T Consensus 353 ~~k~~~lkrvk~---------------kf~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~--------~Ag~~i~~~ 408 (489)
T KOG2643|consen 353 KKKHKYLKRVKE---------------KFKDD-GKGISLQEFKAFFRFLNNLNDFDIALRFYH--------MAGASIDEK 408 (489)
T ss_pred HhHHHHHHHHHH---------------hccCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHHHH--------HcCCCCCHH
Confidence 21 2233333 33333 445777777664321 1111 11222222 223567777
Q ss_pred HHHHHHHhccCC-CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHH
Q 009229 379 DFVYFILSEEDK-SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHR 426 (539)
Q Consensus 379 EFv~fl~~~~~~-~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~ 426 (539)
+|.......... -+..-+.-+|.+||.|+||.||..|+...++.-+++
T Consensus 409 ~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 409 TFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKRRMHR 457 (489)
T ss_pred HHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHHHhhc
Confidence 776665544332 222356777888888888888888877776654443
No 30
>PLN02964 phosphatidylserine decarboxylase
Probab=98.50 E-value=5.3e-07 Score=100.76 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=76.8
Q ss_pred HHHHHhhhhhcccCCCCCccchhhHhhhcC-CCcchH---HHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchH
Q 009229 319 HFYVIYCKFWELDTDHDFLIDKENLIRYGN-HALTYR---IVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEP 394 (539)
Q Consensus 319 hf~~iy~~F~~lD~D~dG~Is~~ef~~~~~-~~ls~~---~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~ 394 (539)
+...++..|..+|.|+||.| ...+.+... ...+.. +++++|+. +|.+++|.|+|.||+.++.......+++
T Consensus 141 qi~elkeaF~lfD~dgdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~----~D~DgdG~IdfdEFl~lL~~lg~~~seE 215 (644)
T PLN02964 141 EPESACESFDLLDPSSSNKV-VGSIFVSCSIEDPVETERSFARRILAI----VDYDEDGQLSFSEFSDLIKAFGNLVAAN 215 (644)
T ss_pred HHHHHHHHHHHHCCCCCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHH----hCCCCCCeEcHHHHHHHHHHhccCCCHH
Confidence 33445556779999999998 444444333 233333 36777764 5999999999999999998766566788
Q ss_pred HHHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 395 SLEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 395 ~i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
.++.+|+.+|.|+||+|+.+||...+..
T Consensus 216 EL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 216 KKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 9999999999999999999999998876
No 31
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.43 E-value=1.3e-06 Score=84.97 Aligned_cols=204 Identities=15% Similarity=0.168 Sum_probs=128.2
Q ss_pred HHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhh
Q 009229 266 AETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIR 345 (539)
Q Consensus 266 ~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~ 345 (539)
...-+..||...|.|.+|+|+..|+++. .+.... +.+++.++ =|. .-|...|+|+||.|+-+|+.-
T Consensus 99 srrklmviFsKvDVNtDrkisAkEmqrw-Imekta-----EHfqeame-eSk-------thFraVDpdgDGhvsWdEykv 164 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVNTDRKISAKEMQRW-IMEKTA-----EHFQEAME-ESK-------THFRAVDPDGDGHVSWDEYKV 164 (362)
T ss_pred HHHHHHHHHhhcccCccccccHHHHHHH-HHHHHH-----HHHHHHHh-hhh-------hheeeeCCCCCCceehhhhhh
Confidence 3445788999999999999999999853 222222 11211111 011 124589999999999999873
Q ss_pred -hc---CCCcchHHHHHHHhc----------cccccccCCCCccc---------HHHHHHHHHhccCC-CchHHHHHHHH
Q 009229 346 -YG---NHALTYRIVDRIFSQ----------VPRKFTSKVEGKMG---------YEDFVYFILSEEDK-SSEPSLEYWFK 401 (539)
Q Consensus 346 -~~---~~~ls~~~i~rif~~----------~~r~~D~~~dG~Id---------f~EFv~fl~~~~~~-~~~~~i~~~Fr 401 (539)
|. ++.-+. ..+.|--. .+..-+.++.|+.+ -+||..|+-.+... .-..-++.+-+
T Consensus 165 kFlaskghseke-vadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivr 243 (362)
T KOG4251|consen 165 KFLASKGHSEKE-VADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVR 243 (362)
T ss_pred HHHhhcCcchHH-HHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHH
Confidence 21 111110 11111000 00011234444444 49999998765432 33556788899
Q ss_pred HcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccchhHHHhhcchHHhh
Q 009229 402 CIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSGSVFNILFNLNKFM 481 (539)
Q Consensus 402 ~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~~~~~n~l~n~~kf~ 481 (539)
.+|.|||-.+|..|+...--...+....-.++..-.++...+.-..+|.|+||.+|++|+-....+..|.+++-.++.-+
T Consensus 244 dlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~m 323 (362)
T KOG4251|consen 244 DLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIM 323 (362)
T ss_pred HhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHH
Confidence 99999999999999876543322222111222233456677888889999999999999999887888888877776666
Q ss_pred hhh
Q 009229 482 AFE 484 (539)
Q Consensus 482 ~~E 484 (539)
+.+
T Consensus 324 a~~ 326 (362)
T KOG4251|consen 324 ALT 326 (362)
T ss_pred hhh
Confidence 553
No 32
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.41 E-value=1.8e-07 Score=73.88 Aligned_cols=28 Identities=29% Similarity=0.522 Sum_probs=20.7
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
...++.+|+.+|.|+||.|+.+|+..+|
T Consensus 39 ~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 39 DEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4566777888888888888888877664
No 33
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.34 E-value=9.8e-07 Score=78.24 Aligned_cols=60 Identities=13% Similarity=0.220 Sum_probs=52.0
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
...+.+.|..+|.|+||+||..||..++ + .+.+..+.++|..+|.|+||.||++||..|-
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~------l-------~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR------L-------DPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH------c-------cchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 5679999999999999999999999765 1 1225778999999999999999999999874
No 34
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.30 E-value=6.3e-06 Score=75.22 Aligned_cols=130 Identities=10% Similarity=0.261 Sum_probs=108.1
Q ss_pred HHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcCC
Q 009229 270 IYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNH 349 (539)
Q Consensus 270 i~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~~ 349 (539)
.+++|..+|.|++|.|.-.+|+ .++..++...++++|+.+++ + ..|-|+..-|....+.
T Consensus 34 fKEAF~~mDqnrDG~IdkeDL~--d~~aSlGk~~~d~elDaM~~---------------E----a~gPINft~FLTmfGe 92 (171)
T KOG0031|consen 34 FKEAFNLMDQNRDGFIDKEDLR--DMLASLGKIASDEELDAMMK---------------E----APGPINFTVFLTMFGE 92 (171)
T ss_pred HHHHHHHHhccCCCcccHHHHH--HHHHHcCCCCCHHHHHHHHH---------------h----CCCCeeHHHHHHHHHH
Confidence 6789999999999999999999 89999999999999999888 3 5678998888875544
Q ss_pred CcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 350 ALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 350 ~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
.++-.-.+..+-..+..||.++.|+|.-..+...|....++-+++.++..|+.+=.|..|.|...+|-+.+
T Consensus 93 kL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~i 163 (171)
T KOG0031|consen 93 KLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYII 163 (171)
T ss_pred HhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHH
Confidence 44322223333445667899999999999999999999999999999999999999999999988887655
No 35
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.27 E-value=1.9e-06 Score=72.80 Aligned_cols=64 Identities=17% Similarity=0.181 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCC-CCCCceeHHHHHHHHHHHH-HHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 394 PSLEYWFKCIDL-DGNGVITRNEMQFFYEEQL-HRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 394 ~~i~~~Fr~~D~-DgDG~Is~~El~~f~~~~~-~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
..+..+|+.||. |++|+|+..||+..+...+ +.+ +-.+.+.+|+..+|.|+||.|+|+||.++.
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l--------s~~~~v~~mi~~~D~d~DG~I~F~EF~~l~ 73 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL--------KDVEGLEEKMKNLDVNQDSKLSFEEFWELI 73 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc--------cCHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 467889999999 9999999999999987632 222 110457999999999999999999998753
No 36
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.16 E-value=7.2e-06 Score=69.20 Aligned_cols=68 Identities=7% Similarity=0.238 Sum_probs=54.4
Q ss_pred HHHHHHHHHcC-CCCCC-ceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 394 PSLEYWFKCID-LDGNG-VITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 394 ~~i~~~Fr~~D-~DgDG-~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
..+..+|+.|| .|||| +|+..||+.+++.+...+ +|.. . -++.+.+++..+|.+++|+|+|+||..+.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~--lg~~-~-~~~~v~~~i~~~D~n~dG~v~f~eF~~li 77 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHF--LEEI-K-EQEVVDKVMETLDSDGDGECDFQEFMAFV 77 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHH--hcCC-C-CHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 46889999998 89999 699999999998755433 2222 1 24558999999999999999999998753
No 37
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.14 E-value=7.2e-06 Score=69.87 Aligned_cols=68 Identities=9% Similarity=0.216 Sum_probs=51.9
Q ss_pred HHHHHHHHHcC-CCCCC-ceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 394 PSLEYWFKCID-LDGNG-VITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 394 ~~i~~~Fr~~D-~DgDG-~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
..+..+|..|| .|||| .||..||+.++..+.... ++.. . -++.+.+|+..+|.+++|.|+|+||....
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~--~~~~-~-~~~~v~~i~~elD~n~dG~Idf~EF~~l~ 79 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDF--LSSQ-K-DPMLVDKIMNDLDSNKDNEVDFNEFVVLV 79 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHh--cccc-c-CHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 34667799999 89999 599999999987643221 1111 1 23568999999999999999999998753
No 38
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.11 E-value=6.7e-06 Score=69.51 Aligned_cols=60 Identities=18% Similarity=0.349 Sum_probs=49.6
Q ss_pred HHHHHHHhHhc-CCCCcccHHHhhhhhHHHH-hhhhccH-HHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhh
Q 009229 269 VIYRIFYYINR-SGNGHLSLRELKRGNLIDA-MQHADEE-EDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIR 345 (539)
Q Consensus 269 vi~riF~~lD~-~~~G~It~~El~~s~~l~~-l~~~~~e-edi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~ 345 (539)
.+..+|..+|+ +++|+|+..||+ .++.. ++...+. +++.++++ .+|.|+||.|+++||.+
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk--~ll~~elg~~ls~~~~v~~mi~---------------~~D~d~DG~I~F~EF~~ 71 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQ--ELLTQQLPHLLKDVEGLEEKMK---------------NLDVNQDSKLSFEEFWE 71 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHH--HHHHHHhhhhccCHHHHHHHHH---------------HhCCCCCCCCcHHHHHH
Confidence 47889999999 999999999999 78887 8876555 78999988 88888887776666554
No 39
>PLN02964 phosphatidylserine decarboxylase
Probab=98.06 E-value=1.1e-05 Score=90.50 Aligned_cols=125 Identities=12% Similarity=0.162 Sum_probs=85.7
Q ss_pred hhhcccCCCCCccchhhHhhhcCCCc---chHHHHHHHhccccccccCCCCcccHHHHHHHHHhcc-CCCchHH---HHH
Q 009229 326 KFWELDTDHDFLIDKENLIRYGNHAL---TYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEE-DKSSEPS---LEY 398 (539)
Q Consensus 326 ~F~~lD~D~dG~Is~~ef~~~~~~~l---s~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~-~~~~~~~---i~~ 398 (539)
+|.-+|++ .++++++..+....+ +...++.+ ..+|..+|.|++|++ +.. .+.+.. ...++.. ++.
T Consensus 112 ~~~~~~~~---~~s~n~lv~~~e~~~t~f~~kqi~el-keaF~lfD~dgdG~i-Lg~---ilrslG~~~pte~e~~fi~~ 183 (644)
T PLN02964 112 RISVFETN---RLSKNTLVGYCELDLFDFVTQEPESA-CESFDLLDPSSSNKV-VGS---IFVSCSIEDPVETERSFARR 183 (644)
T ss_pred EEEEEecC---CCCHHHhhhheeecHhhccHHHHHHH-HHHHHHHCCCCCCcC-HHH---HHHHhCCCCCCHHHHHHHHH
Confidence 45566655 467777777665533 33333333 334567899999997 333 333333 1333443 789
Q ss_pred HHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccc
Q 009229 399 WFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLS 467 (539)
Q Consensus 399 ~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~ 467 (539)
+|+.+|.|+||.|+.+|+..++..+ +.. .+ ++.+.++|+.+|.+++|.||++||++....
T Consensus 184 mf~~~D~DgdG~IdfdEFl~lL~~l-------g~~-~s-eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 184 ILAIVDYDEDGQLSFSEFSDLIKAF-------GNL-VA-ANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHhCCCCCCeEcHHHHHHHHHHh-------ccC-CC-HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 9999999999999999999888642 211 12 456899999999999999999999986433
No 40
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.05 E-value=1.5e-05 Score=67.82 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=54.4
Q ss_pred hHHHHHHHHHcCC-CC-CCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccch
Q 009229 393 EPSLEYWFKCIDL-DG-NGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSG 468 (539)
Q Consensus 393 ~~~i~~~Fr~~D~-Dg-DG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~~ 468 (539)
...+..+|+.||. || +|+|+..||..+++.+.-. .+|.. ++ ++.+.+|+..+|.+++|.|+|+||.++....
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~--~lg~~-~s-~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSE--FLKNQ-KD-PMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHH--Hhhcc-cc-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3467889999997 98 6999999999988753211 01222 11 3567999999999999999999999865443
No 41
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.03 E-value=5.2e-05 Score=80.16 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=77.1
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHH
Q 009229 219 TQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDA 298 (539)
Q Consensus 219 ~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~ 298 (539)
...|..++.+..|+|+...|..+....+ .-..+.+.+++..++..+.|.+...+++ .+++.
T Consensus 142 ~~~f~k~~~d~~g~it~~~Fi~~~~~~~-----------------~l~~t~~~~~v~~l~~~~~~yl~q~df~--~~Lqe 202 (493)
T KOG2562|consen 142 ASTFRKIDGDDTGHITRDKFINYWMRGL-----------------MLTHTRLEQFVNLLIQAGCSYLRQDDFK--PYLQE 202 (493)
T ss_pred hhhhhhhccCcCCceeHHHHHHHHHhhh-----------------hHHHHHHHHHHHHHhccCccceeccccH--HHHHH
Confidence 4568889999999999999999876321 1124558889999999999999999998 56665
Q ss_pred hhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhh
Q 009229 299 MQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIR 345 (539)
Q Consensus 299 l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~ 345 (539)
+--...-+-....-.+-++-.-+|+|+.||.++.-+.|.|+..++.+
T Consensus 203 li~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~ 249 (493)
T KOG2562|consen 203 LIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLR 249 (493)
T ss_pred HHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHH
Confidence 53221100011111222333446899999999999999999999876
No 42
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.99 E-value=2.4e-05 Score=66.32 Aligned_cols=69 Identities=10% Similarity=0.213 Sum_probs=53.1
Q ss_pred hHHHHHHHHHcC-CCCCCc-eeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 393 EPSLEYWFKCID-LDGNGV-ITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 393 ~~~i~~~Fr~~D-~DgDG~-Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
...++.+|+.|| .||+|+ |+..||+.+++..+... ++.. + -++.+.+|+..+|++++|.|+|++|..+.
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~--~~~~-~-s~~~v~~i~~~~D~d~~G~I~f~eF~~l~ 78 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDF--LDAQ-K-DADAVDKIMKELDENGDGEVDFQEFVVLV 78 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHH--ccCC-C-CHHHHHHHHHHHCCCCCCcCcHHHHHHHH
Confidence 356888999997 999995 99999999997532211 1211 1 13568999999999999999999998753
No 43
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.92 E-value=3.7e-05 Score=65.05 Aligned_cols=68 Identities=13% Similarity=0.254 Sum_probs=52.6
Q ss_pred HHHHHHHHH-cCCCCCC-ceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 394 PSLEYWFKC-IDLDGNG-VITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 394 ~~i~~~Fr~-~D~DgDG-~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
..+..+|+. .|.||+| .||..||+.++......+..-..+ +..+.+|+..+|.|+||.|+|+||.++.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~----~~~~~~ll~~~D~d~DG~I~f~EF~~l~ 78 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKD----PGVLDRMMKKLDLNSDGQLDFQEFLNLI 78 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCC----HHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence 456778887 7899987 999999999998765432211111 3567899999999999999999998753
No 44
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=97.91 E-value=4.3e-05 Score=69.13 Aligned_cols=101 Identities=20% Similarity=0.329 Sum_probs=81.3
Q ss_pred hhhHHHHHhhhccCCCCceeHHHHHHHHHhcC-CCCHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccC
Q 009229 180 SFFSTALFRKIDVNNTGLVTRDAFVDYWVNGS-MLTMDTATQI-FSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQS 257 (539)
Q Consensus 180 ~~~~~~LF~~~D~d~~G~Is~~ef~~~~~~~~-~~~~de~~~~-F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~ 257 (539)
.-|+.++-..|..|+.|.+|+++|+.++.... +.+.+.+... |.+||-|++++|-.+|+...+..+-.. +|
T Consensus 70 npfk~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~--eL----- 142 (189)
T KOG0038|consen 70 NPFKRRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD--EL----- 142 (189)
T ss_pred ChHHHHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc--cC-----
Confidence 35788888999999999999999999987754 4555555555 899999999999999999999866321 12
Q ss_pred ChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhh
Q 009229 258 TPEFQERYAETVIYRIFYYINRSGNGHLSLRELK 291 (539)
Q Consensus 258 ~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~ 291 (539)
...-+.-++.++....|.+++|+|++.||.
T Consensus 143 ----s~eEv~~i~ekvieEAD~DgDgkl~~~eFe 172 (189)
T KOG0038|consen 143 ----SDEEVELICEKVIEEADLDGDGKLSFAEFE 172 (189)
T ss_pred ----CHHHHHHHHHHHHHHhcCCCCCcccHHHHH
Confidence 223345678889999999999999999987
No 45
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.91 E-value=5.7e-05 Score=59.24 Aligned_cols=60 Identities=18% Similarity=0.373 Sum_probs=53.3
Q ss_pred HHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 009229 185 ALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLREL 245 (539)
Q Consensus 185 ~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~l 245 (539)
.+|..+|.+++|.|+.+++..++..... +.+++.++|..+|.+++|.|++++|..++..+
T Consensus 3 ~~F~~~D~~~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 3 QIFRSLDPDGDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4899999999999999999999887643 77788999999999999999999999988743
No 46
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.90 E-value=1.4e-05 Score=80.72 Aligned_cols=118 Identities=10% Similarity=0.097 Sum_probs=92.1
Q ss_pred CCCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCC-CchHHHHHHHHHcCCCCCCce
Q 009229 333 DHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDK-SSEPSLEYWFKCIDLDGNGVI 411 (539)
Q Consensus 333 D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~-~~~~~i~~~Fr~~D~DgDG~I 411 (539)
-+.+.|...+|..+..-..++ .....+..||.+++|.+||.|.+..+...+.. .++..|+++|+.|+++.||++
T Consensus 239 ~kg~~igi~efa~~l~vpvsd-----~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ 313 (412)
T KOG4666|consen 239 AKGPDIGIVEFAVNLRVPVSD-----KLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGIS 313 (412)
T ss_pred ccCCCcceeEeeeeeecchhh-----hhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhccccccccc
Confidence 345567777777666555553 22334567899999999999999998887764 578999999999999999999
Q ss_pred eHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 412 TRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 412 s~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
...+|..+++. .+|.+.+. +.-+|..++...+|+|++++|++.+
T Consensus 314 ge~~ls~ilq~------~lgv~~l~----v~~lf~~i~q~d~~ki~~~~f~~fa 357 (412)
T KOG4666|consen 314 GEHILSLILQV------VLGVEVLR----VPVLFPSIEQKDDPKIYASNFRKFA 357 (412)
T ss_pred chHHHHHHHHH------hcCcceee----ccccchhhhcccCcceeHHHHHHHH
Confidence 99888877643 25665543 4567888899999999999999975
No 47
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=97.90 E-value=3e-05 Score=65.46 Aligned_cols=60 Identities=30% Similarity=0.487 Sum_probs=49.3
Q ss_pred HHHHHHHhHh-cCCCC-cccHHHhhhhhHHHH-----hhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchh
Q 009229 269 VIYRIFYYIN-RSGNG-HLSLRELKRGNLIDA-----MQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKE 341 (539)
Q Consensus 269 vi~riF~~lD-~~~~G-~It~~El~~s~~l~~-----l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ 341 (539)
.+.++|..+| ++++| .|+..||+ .++.. ++...+++++..+++ .+|.|+||.|+.+
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~--~ll~~~~~~~lg~~~~~~~v~~~i~---------------~~D~n~dG~v~f~ 71 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELK--ELINNELSHFLEEIKEQEVVDKVME---------------TLDSDGDGECDFQ 71 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHH--HHHHHHhHHHhcCCCCHHHHHHHHH---------------HhCCCCCCcCcHH
Confidence 4789999998 79999 69999999 78887 777677888999998 8888888766666
Q ss_pred hHhh
Q 009229 342 NLIR 345 (539)
Q Consensus 342 ef~~ 345 (539)
+|..
T Consensus 72 eF~~ 75 (88)
T cd05027 72 EFMA 75 (88)
T ss_pred HHHH
Confidence 6544
No 48
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.86 E-value=4.3e-05 Score=80.04 Aligned_cols=132 Identities=18% Similarity=0.277 Sum_probs=93.9
Q ss_pred HHhhhhhcccCCCCCccchhhHhhhcC----CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhc----cCC---
Q 009229 322 VIYCKFWELDTDHDFLIDKENLIRYGN----HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSE----EDK--- 390 (539)
Q Consensus 322 ~iy~~F~~lD~D~dG~Is~~ef~~~~~----~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~----~~~--- 390 (539)
-+-..|...|.+..|.|+......... -.++.+.+. .+....+.+|.+.|++...-+... +..
T Consensus 465 dL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~------~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~sl 538 (631)
T KOG0377|consen 465 DLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLR------PKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSL 538 (631)
T ss_pred HHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhh------hhccCCCcCcceehHhHHHHhhhhhHHHHHHhHH
Confidence 455667799999999999988876432 223322211 111234667899999988765432 111
Q ss_pred -----CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 391 -----SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 391 -----~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
.....++-+|+++|.|+.|.||.+|++..++-...-|. -+++ ++.++++-.++|.|+||+|.+.||...
T Consensus 539 vetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~----~~i~-~~~i~~la~~mD~NkDG~IDlNEfLeA 612 (631)
T KOG0377|consen 539 VETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMN----GAIS-DDEILELARSMDLNKDGKIDLNEFLEA 612 (631)
T ss_pred HHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcC----CCcC-HHHHHHHHHhhccCCCCcccHHHHHHH
Confidence 13567899999999999999999999988765443322 2222 578999999999999999999999874
No 49
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.86 E-value=2.2e-05 Score=61.57 Aligned_cols=58 Identities=21% Similarity=0.398 Sum_probs=48.5
Q ss_pred HHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 397 EYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 397 ~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
+.+|+.+|.|++|.|+.+|+..++.. +|. + ++.+.+|+..++.+++|.|+++||..+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~-------~g~---~-~~~~~~i~~~~d~~~~g~i~~~ef~~~~ 59 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGK-------SGL---P-RSVLAQIWDLADTDKDGKLDKEEFAIAM 59 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHH-------cCC---C-HHHHHHHHHHhcCCCCCcCCHHHHHHHH
Confidence 46899999999999999999988854 232 1 3557999999999999999999998753
No 50
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.84 E-value=5.8e-05 Score=57.15 Aligned_cols=52 Identities=27% Similarity=0.374 Sum_probs=44.9
Q ss_pred CCCcccHHHHHHHHHhccCC-CchHHHHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 371 VEGKMGYEDFVYFILSEEDK-SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 371 ~dG~Idf~EFv~fl~~~~~~-~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
++|.|+.++|..++.....+ .+++.++.+|+.+|.|+||+|+.+|+..++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 36899999999999665556 78888999999999999999999999987753
No 51
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.82 E-value=6e-05 Score=64.35 Aligned_cols=61 Identities=13% Similarity=0.247 Sum_probs=51.4
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
...++.+|+.+|.|++|.|+..|+..+++. .+. + ++.+.+|+..++.+++|.|+++||+..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-------~~~---~-~~ev~~i~~~~d~~~~g~I~~~eF~~~ 69 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLK-------SGL---P-QTLLAKIWNLADIDNDGELDKDEFALA 69 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-------cCC---C-HHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 456888999999999999999999998864 222 2 355789999999999999999999874
No 52
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.79 E-value=8.1e-05 Score=62.31 Aligned_cols=70 Identities=7% Similarity=0.107 Sum_probs=53.2
Q ss_pred hHHHHHHHHHcCC--CCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhccc
Q 009229 393 EPSLEYWFKCIDL--DGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKL 466 (539)
Q Consensus 393 ~~~i~~~Fr~~D~--DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~ 466 (539)
...++.+|+.||. |++|+|+..||..+++...... ++.. . -++.+.+|+..++.+++|.|+|++|..+..
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~--~~~~-~-~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~ 78 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNF--LKNQ-K-DPEAVDKIMKDLDVNKDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhh--ccCC-C-CHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence 3457888999999 8999999999999986532110 1111 1 245689999999999999999999988643
No 53
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.77 E-value=0.00011 Score=62.57 Aligned_cols=61 Identities=10% Similarity=0.130 Sum_probs=51.3
Q ss_pred HHHhhhc-cCCCC-ceeHHHHHHHHHhc------CCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 009229 185 ALFRKID-VNNTG-LVTRDAFVDYWVNG------SMLTMDTATQIFSILNQPDLKYLTQEDFKPVLREL 245 (539)
Q Consensus 185 ~LF~~~D-~d~~G-~Is~~ef~~~~~~~------~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~l 245 (539)
.+|..+| .|++| +|+..+|..++... ...+..++.+++..+|.+++|.|+++||..++..+
T Consensus 14 ~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 14 RIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 4799999 68998 59999999988652 23466788999999999999999999999999855
No 54
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.72 E-value=5.3e-05 Score=71.99 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=55.4
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCce
Q 009229 377 YEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYI 456 (539)
Q Consensus 377 f~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~I 456 (539)
|.+|-||-... -....-+|+.||.|.||+|+..||+.|++.....=. .--+++|+..+|.|.||+|
T Consensus 87 yteF~eFsrkq-----Ik~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQT---------HL~lK~mikeVded~dgkl 152 (244)
T KOG0041|consen 87 YTEFSEFSRKQ-----IKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQT---------HLGLKNMIKEVDEDFDGKL 152 (244)
T ss_pred hhhhhHHHHHH-----HHHHHHHHHHhcccccccccHHHHHHHHHHhCCchh---------hHHHHHHHHHhhcccccch
Confidence 77777775432 334677899999999999999999998754322111 1236899999999999999
Q ss_pred eHHHHhh
Q 009229 457 TLRDLKG 463 (539)
Q Consensus 457 Tl~Df~~ 463 (539)
|+.+|.-
T Consensus 153 SfreflL 159 (244)
T KOG0041|consen 153 SFREFLL 159 (244)
T ss_pred hHHHHHH
Confidence 9999864
No 55
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.71 E-value=0.00016 Score=61.04 Aligned_cols=61 Identities=15% Similarity=0.258 Sum_probs=53.5
Q ss_pred HHHhhhcc-CC-CCceeHHHHHHHHHh----cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 009229 185 ALFRKIDV-NN-TGLVTRDAFVDYWVN----GSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLREL 245 (539)
Q Consensus 185 ~LF~~~D~-d~-~G~Is~~ef~~~~~~----~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~l 245 (539)
.+|.++++ |+ +|.|+.++|...+.+ ....+.+++.++++.+|.+++|.|+++||..++..+
T Consensus 14 ~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 14 AIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 48999998 67 899999999999963 345688899999999999999999999999998865
No 56
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.71 E-value=0.00017 Score=61.53 Aligned_cols=62 Identities=18% Similarity=0.306 Sum_probs=54.9
Q ss_pred HHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHh
Q 009229 185 ALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLA 247 (539)
Q Consensus 185 ~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~ 247 (539)
.+|..+|.|++|.|+.+++...++... .+.+++.+++..+|.+++|+|++++|..++..+-.
T Consensus 14 ~~F~~~D~d~~G~Is~~el~~~l~~~~-~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 14 QIFRSLDKNQDGTVTGAQAKPILLKSG-LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred HHHHHhCCCCCCeEeHHHHHHHHHHcC-CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 489999999999999999999998753 56778899999999999999999999999876543
No 57
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.67 E-value=7e-05 Score=66.47 Aligned_cols=54 Identities=15% Similarity=0.271 Sum_probs=33.8
Q ss_pred hhhcccCCCCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHH
Q 009229 326 KFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFI 384 (539)
Q Consensus 326 ~F~~lD~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl 384 (539)
.|..+|+|+||.|+.+||..+. .......++++|.. +|.|+||.|+++||..++
T Consensus 53 ~F~~lD~d~DG~Ls~~EL~~~~-l~~~e~~~~~f~~~----~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 53 MFNQLDGNYDGKLSHHELAPIR-LDPNEHCIKPFFES----CDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHCCCCCCcCCHHHHHHHH-ccchHHHHHHHHHH----HCCCCCCCCCHHHHHHHH
Confidence 5558999999999999998654 11223344444432 356666666666666555
No 58
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.65 E-value=0.00012 Score=62.01 Aligned_cols=63 Identities=24% Similarity=0.489 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhHh-cCCCC-cccHHHhhhhhHHHH-hhh----hccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCcc
Q 009229 266 AETVIYRIFYYIN-RSGNG-HLSLRELKRGNLIDA-MQH----ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLI 338 (539)
Q Consensus 266 ~~~vi~riF~~lD-~~~~G-~It~~El~~s~~l~~-l~~----~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~I 338 (539)
+...+.++|..+| ++++| .|+..||+ .++.. ++. ..++++++++++ .+|.|++|.|
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~--~~l~~~lg~~~~~~~s~~~v~~i~~---------------~~D~d~~G~I 69 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELK--DLLQTELSDFLDAQKDADAVDKIMK---------------ELDENGDGEV 69 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHH--HHHHHHHHHHccCCCCHHHHHHHHH---------------HHCCCCCCcC
Confidence 4456889999997 99999 59999999 67764 543 235678888888 7888877666
Q ss_pred chhhHhh
Q 009229 339 DKENLIR 345 (539)
Q Consensus 339 s~~ef~~ 345 (539)
+.++|..
T Consensus 70 ~f~eF~~ 76 (92)
T cd05025 70 DFQEFVV 76 (92)
T ss_pred cHHHHHH
Confidence 6555543
No 59
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.61 E-value=7e-05 Score=49.76 Aligned_cols=28 Identities=29% Similarity=0.431 Sum_probs=24.1
Q ss_pred HHHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 395 SLEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 395 ~i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
.++.+|+.+|+||||+||.+|+..+++.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 3678999999999999999999987753
No 60
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.61 E-value=0.00014 Score=54.75 Aligned_cols=60 Identities=20% Similarity=0.327 Sum_probs=48.9
Q ss_pred HHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 396 LEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 396 i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
+..+|+.+|.|++|.|+..|+..+++... .. .....+..+++.++.+++|.|++++|..+
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-------~~--~~~~~~~~~~~~~~~~~~~~l~~~ef~~~ 61 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-------EG--LSEEEIDEMIREVDKDGDGKIDFEEFLEL 61 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-------CC--CCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence 56789999999999999999998876432 11 12466788999999999999999999764
No 61
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.60 E-value=0.00017 Score=61.37 Aligned_cols=63 Identities=22% Similarity=0.427 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhHhc-CC-CCcccHHHhhhhhHHHH-----hhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCcc
Q 009229 266 AETVIYRIFYYINR-SG-NGHLSLRELKRGNLIDA-----MQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLI 338 (539)
Q Consensus 266 ~~~vi~riF~~lD~-~~-~G~It~~El~~s~~l~~-----l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~I 338 (539)
+...+.++|..+|. ++ +|+|+..||+ .++.. ++...+++++..+++ .+|.|++|.|
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~--~~l~~~~g~~lg~~~s~~ei~~~~~---------------~~D~~~dg~I 68 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELK--KLMEKELSEFLKNQKDPMAVDKIMK---------------DLDQNRDGKV 68 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHH--HHHHHHhHHHhhccccHHHHHHHHH---------------HhCCCCCCcC
Confidence 34458899999997 87 7999999999 56654 333456778888888 8888888777
Q ss_pred chhhHhh
Q 009229 339 DKENLIR 345 (539)
Q Consensus 339 s~~ef~~ 345 (539)
+.++|..
T Consensus 69 ~f~eF~~ 75 (94)
T cd05031 69 NFEEFVS 75 (94)
T ss_pred cHHHHHH
Confidence 7666654
No 62
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.59 E-value=0.00017 Score=54.23 Aligned_cols=55 Identities=20% Similarity=0.290 Sum_probs=46.8
Q ss_pred ccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 366 KFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 366 ~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
.+|.+++|.|++.+|...+.......+...+..+|+.+|.+++|.|+.+++..++
T Consensus 8 ~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 8 LFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4578888999999999888877666778888999999999999999999987654
No 63
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.56 E-value=0.00027 Score=53.47 Aligned_cols=51 Identities=16% Similarity=0.341 Sum_probs=43.6
Q ss_pred CCCceeHHHHHHHHHhc-CC-CCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 009229 194 NTGLVTRDAFVDYWVNG-SM-LTMDTATQIFSILNQPDLKYLTQEDFKPVLRE 244 (539)
Q Consensus 194 ~~G~Is~~ef~~~~~~~-~~-~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~ 244 (539)
++|.|+.++|..++..+ .. .+.+++..+|..+|.+++|+|+++||..+++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47899999999998663 34 67788899999999999999999999998874
No 64
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.46 E-value=0.00026 Score=59.75 Aligned_cols=59 Identities=25% Similarity=0.450 Sum_probs=46.2
Q ss_pred HHHHHHhHhc-CC-CCcccHHHhhhhhHHH---HhhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHh
Q 009229 270 IYRIFYYINR-SG-NGHLSLRELKRGNLID---AMQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLI 344 (539)
Q Consensus 270 i~riF~~lD~-~~-~G~It~~El~~s~~l~---~l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~ 344 (539)
+-.+|..++. ++ +|.|+..||+ .++. .++...+++++.++++ .+|.|++|.|+.+||.
T Consensus 12 ~i~~F~~y~~~~~~~g~Is~~EL~--~~l~~~~~lg~k~t~~ev~~m~~---------------~~D~d~dG~Idf~EFv 74 (88)
T cd05029 12 LVAIFHKYSGREGDKNTLSKKELK--ELIQKELTIGSKLQDAEIAKLME---------------DLDRNKDQEVNFQEYV 74 (88)
T ss_pred HHHHHHHHHccCCCCCEECHHHHH--HHHHHHHhcCCCCCHHHHHHHHH---------------HhcCCCCCCCcHHHHH
Confidence 6678999998 67 8999999999 6775 3566667889999988 8888887666655554
Q ss_pred h
Q 009229 345 R 345 (539)
Q Consensus 345 ~ 345 (539)
.
T Consensus 75 ~ 75 (88)
T cd05029 75 T 75 (88)
T ss_pred H
Confidence 3
No 65
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.37 E-value=0.00067 Score=56.71 Aligned_cols=61 Identities=10% Similarity=0.146 Sum_probs=52.1
Q ss_pred HHHhhhcc--CCCCceeHHHHHHHHHh-cCC-----CCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 009229 185 ALFRKIDV--NNTGLVTRDAFVDYWVN-GSM-----LTMDTATQIFSILNQPDLKYLTQEDFKPVLREL 245 (539)
Q Consensus 185 ~LF~~~D~--d~~G~Is~~ef~~~~~~-~~~-----~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~l 245 (539)
.+|..+|+ +++|.|+.++|..++.. ... .+.+++.+++..+|.+++|.|++++|..++..+
T Consensus 12 ~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 12 DVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 48999999 89999999999999865 221 246788999999999999999999999998854
No 66
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.33 E-value=0.00026 Score=45.34 Aligned_cols=24 Identities=38% Similarity=0.523 Sum_probs=21.7
Q ss_pred HHHHHHHcCCCCCCceeHHHHHHH
Q 009229 396 LEYWFKCIDLDGNGVITRNEMQFF 419 (539)
Q Consensus 396 i~~~Fr~~D~DgDG~Is~~El~~f 419 (539)
++.+|+.+|.|+||.||.+|+..+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 467999999999999999999875
No 67
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.32 E-value=0.014 Score=62.43 Aligned_cols=251 Identities=16% Similarity=0.195 Sum_probs=144.6
Q ss_pred CCHHHHHHHHHHhcCCchhh---HHHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHH-HHHHHHhCCCCCCCCCHHHH
Q 009229 163 LQIQEFKLVTKEICKLPSFF---STALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTA-TQIFSILNQPDLKYLTQEDF 238 (539)
Q Consensus 163 l~~~~F~~i~k~~~~lp~~~---~~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~-~~~F~llD~dg~G~Is~~ef 238 (539)
++-++|.+-+--+.+.+.|= -..+=...|..+||-|+++||..+=.. .+. +|.. ...|.++|..++|.++.+++
T Consensus 53 mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~-lC~-pDal~~~aFqlFDr~~~~~vs~~~~ 130 (694)
T KOG0751|consen 53 MTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESV-LCA-PDALFEVAFQLFDRLGNGEVSFEDV 130 (694)
T ss_pred cCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhh-ccC-chHHHHHHHHHhcccCCCceehHHH
Confidence 57788887665455554432 223334567889999999999776433 232 3433 44499999999999999999
Q ss_pred HHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHHhhccchh
Q 009229 239 KPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKVLRYFSYE 318 (539)
Q Consensus 239 ~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i~~~FSye 318 (539)
..++......|... | +-+.+| |.+.| ..+....+++.+|- .++..+..- ...+.+.
T Consensus 131 ~~if~~t~l~~~~~-f-~~d~ef--------I~~~F---g~~~~r~~ny~~f~--Q~lh~~~~E----~~~qafr----- 186 (694)
T KOG0751|consen 131 ADIFGQTNLHHHIP-F-NWDSEF--------IKLHF---GDIRKRHLNYAEFT--QFLHEFQLE----HAEQAFR----- 186 (694)
T ss_pred HHHHhccccccCCC-c-cCCcch--------HHHHh---hhHHHHhccHHHHH--HHHHHHHHH----HHHHHHH-----
Confidence 99998643333211 1 111123 33322 22333457777776 555544322 2223333
Q ss_pred HHHHHhhhhhcccCCCCCccchhhHhhhcC---CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHH
Q 009229 319 HFYVIYCKFWELDTDHDFLIDKENLIRYGN---HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPS 395 (539)
Q Consensus 319 hf~~iy~~F~~lD~D~dG~Is~~ef~~~~~---~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~ 395 (539)
+-|..++|.|+.-+|....- ..+...+++..+..+- ..+...+++|..|..|-.-.. .-+.
T Consensus 187 ----------~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~va---gg~~~H~vSf~yf~afnslL~---~mel 250 (694)
T KOG0751|consen 187 ----------EKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVA---GGNDSHQVSFSYFNAFNSLLN---NMEL 250 (694)
T ss_pred ----------HhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhc---CCCCccccchHHHHHHHHHHh---hHHH
Confidence 78999999999888876432 2223334444433321 233445778887777654432 2455
Q ss_pred HHHHHHHc-CCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 396 LEYWFKCI-DLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 396 i~~~Fr~~-D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
++..+..+ +.-.|-.++.+++..+-+.. .+ ..++. -|++-++-+...+ -|.+|++|+.+.
T Consensus 251 irk~y~s~~~~~~d~~~~kdq~~~~a~~~----~q--~t~~~-idilf~la~~~~~--~~~ltl~Di~~I 311 (694)
T KOG0751|consen 251 IRKIYSSLAGTRKDVEVTKDQFSLAAQTS----KQ--VTPLE-IDILFQLADLYHP--MGRLTLADIERI 311 (694)
T ss_pred HHHHHHHhcccccchhhhHHHHHHHHHHh----hc--cCchh-hhhhhhhhhcccc--cccccHHHHHhh
Confidence 66666543 55677788888877544322 21 11111 1344444443333 458999999885
No 68
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.30 E-value=9.5e-05 Score=65.36 Aligned_cols=63 Identities=16% Similarity=0.252 Sum_probs=46.9
Q ss_pred CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 391 SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 391 ~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
.....+.+.|..+|.|+||+|+..||..+...+ ++.+.++...++..|.|+||+||+.|+..|
T Consensus 51 ~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l-----------~~~e~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 51 ECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL-----------MPPEHCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp GGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT-----------STTGGGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH-----------hhhHHHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 346788999999999999999999999765311 234567899999999999999999999876
No 69
>PF14658 EF-hand_9: EF-hand domain
Probab=97.29 E-value=0.00086 Score=53.21 Aligned_cols=59 Identities=15% Similarity=0.255 Sum_probs=51.7
Q ss_pred HHhhhccCCCCceeHHHHHHHHHhcCC-CC-HHHHHHHHHHhCCCCC-CCCCHHHHHHHHHH
Q 009229 186 LFRKIDVNNTGLVTRDAFVDYWVNGSM-LT-MDTATQIFSILNQPDL-KYLTQEDFKPVLRE 244 (539)
Q Consensus 186 LF~~~D~d~~G~Is~~ef~~~~~~~~~-~~-~de~~~~F~llD~dg~-G~Is~~ef~~~i~~ 244 (539)
.|.+||.+++|.|.+.+++.+++..+. .+ ..+...+.+.+|.+|. |.|++++|..+|+.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 699999999999999999999998654 44 4457777999999988 99999999999985
No 70
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.20 E-value=0.0015 Score=55.17 Aligned_cols=61 Identities=13% Similarity=0.224 Sum_probs=48.7
Q ss_pred HHHhh-hccCCCC-ceeHHHHHHHHHhcC------CCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 009229 185 ALFRK-IDVNNTG-LVTRDAFVDYWVNGS------MLTMDTATQIFSILNQPDLKYLTQEDFKPVLREL 245 (539)
Q Consensus 185 ~LF~~-~D~d~~G-~Is~~ef~~~~~~~~------~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~l 245 (539)
.+|.. +|.+++| .|+.+||..++.... .....++.+++..+|.|++|.|+++||..+|..+
T Consensus 13 ~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 13 AVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 47777 6777765 899999988877641 2345678889999999999999999999998865
No 71
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.19 E-value=0.0091 Score=63.89 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=44.1
Q ss_pred hHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 353 YRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 353 ~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
..++.+.|... +.-.++|.+|..++... ..+..+.+|+..|+.++|.||.-++++..-.
T Consensus 149 ~efI~~~Fg~~-------~~r~~ny~~f~Q~lh~~----~~E~~~qafr~~d~~~ng~is~Ldfq~imvt 207 (694)
T KOG0751|consen 149 SEFIKLHFGDI-------RKRHLNYAEFTQFLHEF----QLEHAEQAFREKDKAKNGFISVLDFQDIMVT 207 (694)
T ss_pred cchHHHHhhhH-------HHHhccHHHHHHHHHHH----HHHHHHHHHHHhcccCCCeeeeechHhhhhh
Confidence 45666666542 23468899999988653 2445888999999999999999998876543
No 72
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.13 E-value=0.00042 Score=58.35 Aligned_cols=30 Identities=13% Similarity=0.319 Sum_probs=17.4
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
...+..+|+.+|.|+||.|+.+|+..++..
T Consensus 50 ~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 50 QKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 455555666666666666666665555543
No 73
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.09 E-value=0.0035 Score=66.11 Aligned_cols=59 Identities=24% Similarity=0.411 Sum_probs=40.2
Q ss_pred HHHHHHhHhcCCCCcccHHHhhhhhHHHHhh----hhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhh
Q 009229 270 IYRIFYYINRSGNGHLSLRELKRGNLIDAMQ----HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIR 345 (539)
Q Consensus 270 i~riF~~lD~~~~G~It~~El~~s~~l~~l~----~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~ 345 (539)
+.-||..+|.+++|.|+++||+. ...-+. ...+.+.|.++.+ .+|-++||.|+.+||.+
T Consensus 549 LetiF~~iD~D~SG~isldEF~~--a~~l~~sh~~~~i~~~~i~~la~---------------~mD~NkDG~IDlNEfLe 611 (631)
T KOG0377|consen 549 LETIFNIIDADNSGEISLDEFRT--AWKLLSSHMNGAISDDEILELAR---------------SMDLNKDGKIDLNEFLE 611 (631)
T ss_pred HHHHHHHhccCCCCceeHHHHHH--HHHHHHhhcCCCcCHHHHHHHHH---------------hhccCCCCcccHHHHHH
Confidence 56799999999999999999984 333222 2234556666666 66666666666555543
No 74
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.05 E-value=0.00073 Score=64.41 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=64.1
Q ss_pred HHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcC---CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHh
Q 009229 310 KVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGN---HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILS 386 (539)
Q Consensus 310 ~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~---~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~ 386 (539)
.-+.|||-+.+.-.|..|..+|.|.||+|+..||+++.. .+-+..-++.++.++ |.|.+|+|+|.||+-....
T Consensus 88 teF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeV----ded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 88 TEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEV----DEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHh----hcccccchhHHHHHHHHHH
Confidence 345688888888889999999999999999999987642 233444555555554 6778888888888643322
Q ss_pred ccCC--CchHHHHHHHHH--cCCCCCCceeHH
Q 009229 387 EEDK--SSEPSLEYWFKC--IDLDGNGVITRN 414 (539)
Q Consensus 387 ~~~~--~~~~~i~~~Fr~--~D~DgDG~Is~~ 414 (539)
.-.+ .....+..+=+. .|+..-|+....
T Consensus 164 aaagEL~~ds~~~~LAr~~eVDVskeGV~GAk 195 (244)
T KOG0041|consen 164 AAAGELQEDSGLLRLARLSEVDVSKEGVSGAK 195 (244)
T ss_pred HhccccccchHHHHHHHhcccchhhhhhhhHH
Confidence 1111 112223333333 566666665543
No 75
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.00 E-value=0.00091 Score=44.84 Aligned_cols=27 Identities=33% Similarity=0.491 Sum_probs=23.6
Q ss_pred HHHHHHHHcCCCCCCceeHHHHHHHHH
Q 009229 395 SLEYWFKCIDLDGNGVITRNEMQFFYE 421 (539)
Q Consensus 395 ~i~~~Fr~~D~DgDG~Is~~El~~f~~ 421 (539)
.++.+|+.+|.|+||+|+.+||..+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 367899999999999999999998875
No 76
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=96.99 E-value=0.00058 Score=45.34 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=17.9
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHH
Q 009229 218 ATQIFSILNQPDLKYLTQEDFKPVLR 243 (539)
Q Consensus 218 ~~~~F~llD~dg~G~Is~~ef~~~i~ 243 (539)
..++|+.+|+|++|+|+++||..+++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 45667777777777777777776665
No 77
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.88 E-value=0.0024 Score=68.23 Aligned_cols=66 Identities=24% Similarity=0.338 Sum_probs=51.5
Q ss_pred HHHHHHHHHh--ccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCC
Q 009229 377 YEDFVYFILS--EEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQS 454 (539)
Q Consensus 377 f~EFv~fl~~--~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG 454 (539)
++.++.-.+. .........++.+|+.+|.||||+|+.+|+.. +..||+.+|.|+||
T Consensus 315 L~~~i~~~~~~~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~----------------------~~~~F~~~D~d~DG 372 (391)
T PRK12309 315 LEKLLAHRLARLEGGEAFTHAAQEIFRLYDLDGDGFITREEWLG----------------------SDAVFDALDLNHDG 372 (391)
T ss_pred HHHHHHHHHHHhhccChhhHHHHHHHHHhCCCCCCcCcHHHHHH----------------------HHHHHHHhCCCCCC
Confidence 4555553333 22334578899999999999999999999831 25689999999999
Q ss_pred ceeHHHHhhc
Q 009229 455 YITLRDLKGC 464 (539)
Q Consensus 455 ~ITl~Df~~~ 464 (539)
.|+++||++.
T Consensus 373 ~Is~eEf~~~ 382 (391)
T PRK12309 373 KITPEEMRAG 382 (391)
T ss_pred CCcHHHHHHH
Confidence 9999999984
No 78
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=96.73 E-value=0.0045 Score=52.07 Aligned_cols=59 Identities=22% Similarity=0.374 Sum_probs=43.1
Q ss_pred HHHHHHhHhcC--CCCcccHHHhhhhhHHH-Hhhhhcc----HHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhh
Q 009229 270 IYRIFYYINRS--GNGHLSLRELKRGNLID-AMQHADE----EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKEN 342 (539)
Q Consensus 270 i~riF~~lD~~--~~G~It~~El~~s~~l~-~l~~~~~----eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~e 342 (539)
+.++|..++.. .+|.|+..||+ .++. .++...+ +++++.+++ .+|.|++|.|+.++
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~--~ll~~~~g~~~t~~~~~~~v~~i~~---------------~~D~d~dG~I~f~e 72 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFK--QLVEKELPNFLKKEKNQKAIDKIFE---------------DLDTNQDGQLSFEE 72 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHH--HHHHHHhhHhhccCCCHHHHHHHHH---------------HcCCCCCCcCcHHH
Confidence 66788888866 48999999999 6775 5555444 678888888 77877776666555
Q ss_pred Hhh
Q 009229 343 LIR 345 (539)
Q Consensus 343 f~~ 345 (539)
|..
T Consensus 73 F~~ 75 (88)
T cd05030 73 FLV 75 (88)
T ss_pred HHH
Confidence 543
No 79
>PF14658 EF-hand_9: EF-hand domain
Probab=96.67 E-value=0.0021 Score=51.05 Aligned_cols=57 Identities=16% Similarity=0.350 Sum_probs=48.5
Q ss_pred HHHHhHhcCCCCcccHHHhhhhhHHHHhhh-hccHHHHHHHhhccchhHHHHHhhhhhcccCCCC-CccchhhHhh
Q 009229 272 RIFYYINRSGNGHLSLRELKRGNLIDAMQH-ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHD-FLIDKENLIR 345 (539)
Q Consensus 272 riF~~lD~~~~G~It~~El~~s~~l~~l~~-~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~d-G~Is~~ef~~ 345 (539)
.+|..+|.++.|+|.+.+|+ .+|..++. ...+.+++.+.+ ++|.++. |.|++++|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~--~~Lra~~~~~p~e~~Lq~l~~---------------elDP~g~~~~v~~d~F~~ 60 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLI--TYLRAVTGRSPEESELQDLIN---------------ELDPEGRDGSVNFDTFLA 60 (66)
T ss_pred cchhhcCCcCCceEeHHHHH--HHHHHHcCCCCcHHHHHHHHH---------------HhCCCCCCceEeHHHHHH
Confidence 46899999999999999999 89999998 677888999888 9999876 7676666654
No 80
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.62 E-value=0.006 Score=45.86 Aligned_cols=49 Identities=16% Similarity=0.281 Sum_probs=39.3
Q ss_pred cccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 374 KMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 374 ~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
+|+|+|-..++....-.....-+..+|+..|.+++|.|..+||..||+.
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 5789999988877766667778888999999999999999999999975
No 81
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.58 E-value=0.0061 Score=51.63 Aligned_cols=55 Identities=18% Similarity=0.410 Sum_probs=33.8
Q ss_pred hhcccCCCCCccchhhHhhhcC--------CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHh
Q 009229 327 FWELDTDHDFLIDKENLIRYGN--------HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILS 386 (539)
Q Consensus 327 F~~lD~D~dG~Is~~ef~~~~~--------~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~ 386 (539)
|.++. .+.+.+++.||..... ..-++..++++++.+ |.|+||.|+|.||+.++..
T Consensus 14 FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~L----D~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 14 FHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDL----DDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHh----CCCCCCcCcHHHHHHHHHH
Confidence 33443 3456899999986532 223455666666544 6677777777777666543
No 82
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.58 E-value=0.016 Score=68.89 Aligned_cols=134 Identities=22% Similarity=0.327 Sum_probs=88.1
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHH--
Q 009229 221 IFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDA-- 298 (539)
Q Consensus 221 ~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~-- 298 (539)
+|.-||.+.+|.|+..+|...++.+-=..|..+--...|+ +.+++..+|++.+|.|+..|+.+ ||-.
T Consensus 2258 ~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~---------fe~~ld~vDP~r~G~Vsl~dY~a--fmi~~E 2326 (2399)
T KOG0040|consen 2258 MFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPE---------FEEILDLVDPNRDGYVSLQDYMA--FMISKE 2326 (2399)
T ss_pred HHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChh---------HHHHHHhcCCCCcCcccHHHHHH--HHHhcc
Confidence 3888999999999999999999976444554433333455 56789999999999999999984 3321
Q ss_pred hhhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcCCCcchHHHHHHHhcccccccc----CCCCc
Q 009229 299 MQHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTS----KVEGK 374 (539)
Q Consensus 299 l~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~----~~dG~ 374 (539)
-..+.+.++|...++ .||. +.-+|+++++..- +++..++-..+.+....+. .-.+.
T Consensus 2327 TeNI~s~~eIE~Afr---------------aL~a-~~~yvtke~~~~~----ltreqaefc~s~m~~~~e~~~~~s~q~~ 2386 (2399)
T KOG0040|consen 2327 TENILSSEEIEDAFR---------------ALDA-GKPYVTKEELYQN----LTREQAEFCMSKMKPYAETSSGRSDQVA 2386 (2399)
T ss_pred cccccchHHHHHHHH---------------Hhhc-CCccccHHHHHhc----CCHHHHHHHHHHhhhhcccccCCCcccc
Confidence 112223334544444 9999 7789999988543 3443333333332222232 23467
Q ss_pred ccHHHHHHHHH
Q 009229 375 MGYEDFVYFIL 385 (539)
Q Consensus 375 Idf~EFv~fl~ 385 (539)
++|.+|+.-+.
T Consensus 2387 l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2387 LDYKDFVNSLF 2397 (2399)
T ss_pred ccHHHHHHHHh
Confidence 99999987654
No 83
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.17 E-value=0.019 Score=48.63 Aligned_cols=64 Identities=8% Similarity=0.142 Sum_probs=49.0
Q ss_pred HHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 396 LEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 396 i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
+-..|..|- -+.|.||..||+.+++..+..+-.-..+ .+.+++++..+|.|+||.|+|+||..+
T Consensus 10 lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d----~~~vd~im~~LD~n~Dg~vdF~EF~~L 73 (91)
T cd05024 10 MMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQND----PMAVDKIMKDLDDCRDGKVGFQSFFSL 73 (91)
T ss_pred HHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCC----HHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 445676666 3456999999999998776654322222 367899999999999999999999875
No 84
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.13 E-value=0.0077 Score=64.38 Aligned_cols=48 Identities=23% Similarity=0.321 Sum_probs=40.8
Q ss_pred cccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHH
Q 009229 363 VPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQ 423 (539)
Q Consensus 363 ~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~ 423 (539)
+++.+|.+++|.|+..||+. .+.+|+.+|.|+||.|+.+|+..++...
T Consensus 339 aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 339 IFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred HHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 34457999999999999952 5789999999999999999999887654
No 85
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.11 E-value=0.036 Score=66.00 Aligned_cols=127 Identities=19% Similarity=0.329 Sum_probs=86.8
Q ss_pred HHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhcc-------HHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhh
Q 009229 270 IYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADE-------EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKEN 342 (539)
Q Consensus 270 i~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~-------eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~e 342 (539)
..-+|..||++.+|+++..+|+ ..+..+|-..+ +.++.+++. .+
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~--sCLrslgY~lpmvEe~~~~p~fe~~ld---------------~v------------ 2305 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFK--SCLRSLGYDLPMVEEGEPEPEFEEILD---------------LV------------ 2305 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHH--HHHHhcCCCCcccccCCCChhHHHHHH---------------hc------------
Confidence 5678999999999999999999 55777664321 123444444 33
Q ss_pred HhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccC--CCchHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 343 LIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEED--KSSEPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 343 f~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~--~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
|.+.+|+|+..+|+.||++.+. -.+...|+-+|+.+|. |.-||+..++..-+
T Consensus 2306 -------------------------DP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~l 2359 (2399)
T KOG0040|consen 2306 -------------------------DPNRDGYVSLQDYMAFMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQNL 2359 (2399)
T ss_pred -------------------------CCCCcCcccHHHHHHHHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhcC
Confidence 5566677788899999988653 3345599999999999 99999999986432
Q ss_pred H-HHHHHhhhccCCCCcHHHHHHHHHHhhCC----CCCCceeHHHHhhc
Q 009229 421 E-EQLHRMECMAQEPVLFEDILCQIIDMIGP----ENQSYITLRDLKGC 464 (539)
Q Consensus 421 ~-~~~~~l~~~~~e~~~fed~~~qi~d~id~----~~dG~ITl~Df~~~ 464 (539)
. ++. +=++..|-..+++ ...+.|.|.||.+.
T Consensus 2360 treqa-------------efc~s~m~~~~e~~~~~s~q~~l~y~dfv~s 2395 (2399)
T KOG0040|consen 2360 TREQA-------------EFCMSKMKPYAETSSGRSDQVALDYKDFVNS 2395 (2399)
T ss_pred CHHHH-------------HHHHHHhhhhcccccCCCccccccHHHHHHH
Confidence 1 111 1234444444554 34567888888764
No 86
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.06 E-value=0.0074 Score=53.35 Aligned_cols=65 Identities=23% Similarity=0.287 Sum_probs=39.2
Q ss_pred ccchhHHHHHhhhhhcccCCCCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCch
Q 009229 314 YFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSE 393 (539)
Q Consensus 314 ~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~ 393 (539)
......-+++.=+|..||.|+||.|++.|+..+...- ...+
T Consensus 47 ~~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l---------------------------------------~~~e 87 (113)
T PF10591_consen 47 SSYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL---------------------------------------MPPE 87 (113)
T ss_dssp HTGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT---------------------------------------STTG
T ss_pred cchhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH---------------------------------------hhhH
Confidence 3344556677778888888888888888886542210 1234
Q ss_pred HHHHHHHHHcCCCCCCceeHHHHH
Q 009229 394 PSLEYWFKCIDLDGNGVITRNEMQ 417 (539)
Q Consensus 394 ~~i~~~Fr~~D~DgDG~Is~~El~ 417 (539)
.-++.+|+..|.|+||.||..|..
T Consensus 88 ~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 88 HCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp GGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHc
Confidence 456777788888888888887754
No 87
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=95.56 E-value=0.014 Score=39.03 Aligned_cols=28 Identities=18% Similarity=0.618 Sum_probs=23.4
Q ss_pred HHHHHHhHhcCCCCcccHHHhhhhhHHH-Hh
Q 009229 270 IYRIFYYINRSGNGHLSLRELKRGNLID-AM 299 (539)
Q Consensus 270 i~riF~~lD~~~~G~It~~El~~s~~l~-~l 299 (539)
++.+|..+|.+++|+|+..||+ .++. ++
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~--~~l~~~l 30 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELR--AILRKSL 30 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHH--HHHHHHT
T ss_pred HHHHHHHHCCCCCCcCcHHHHH--HHHHHhc
Confidence 6789999999999999999999 6666 44
No 88
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.28 E-value=0.053 Score=47.23 Aligned_cols=57 Identities=21% Similarity=0.396 Sum_probs=48.5
Q ss_pred HHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 009229 185 ALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLR 243 (539)
Q Consensus 185 ~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~ 243 (539)
.+|...+. .+|.|+..+...++.+ ...+.+...+++.+.|.+++|+|+.+||.-.|.
T Consensus 14 ~~F~~l~~-~~g~isg~~a~~~f~~-S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 14 QIFQSLDP-QDGKISGDQAREFFMK-SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHCTSS-STTEEEHHHHHHHHHH-TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred HHHHhcCC-CCCeEeHHHHHHHHHH-cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 58888885 6899999999998876 456778999999999999999999999988765
No 89
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.27 E-value=0.056 Score=47.39 Aligned_cols=72 Identities=18% Similarity=0.206 Sum_probs=51.1
Q ss_pred chHHHH-HHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCc------HHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 392 SEPSLE-YWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVL------FEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 392 ~~~~i~-~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~------fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
+++.++ ..|++.|.|++|.|+--||..-+.-....- .-|.++++ .+.+++.+++.-|.|+||.|.|.||.+.
T Consensus 64 tpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h-~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 64 TPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAH-DSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred CHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhh-hcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 444444 468999999999999999887665433311 23444432 3456777777789999999999999764
No 90
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.12 E-value=0.061 Score=46.86 Aligned_cols=61 Identities=16% Similarity=0.371 Sum_probs=47.2
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
.+....+|+.+| .++|.|+..+...|+..- + ++ .+++.+|++.+|.+++|+++++||.-++
T Consensus 9 ~~~y~~~F~~l~-~~~g~isg~~a~~~f~~S-------~---L~-~~~L~~IW~LaD~~~dG~L~~~EF~iAm 69 (104)
T PF12763_consen 9 KQKYDQIFQSLD-PQDGKISGDQAREFFMKS-------G---LP-RDVLAQIWNLADIDNDGKLDFEEFAIAM 69 (104)
T ss_dssp HHHHHHHHHCTS-SSTTEEEHHHHHHHHHHT-------T---SS-HHHHHHHHHHH-SSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCCeEeHHHHHHHHHHc-------C---CC-HHHHHHHHhhhcCCCCCcCCHHHHHHHH
Confidence 455677899888 478999999999887421 1 22 3678999999999999999999997643
No 91
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=94.90 E-value=0.028 Score=35.92 Aligned_cols=22 Identities=23% Similarity=0.564 Sum_probs=20.1
Q ss_pred HHHHHHhHhcCCCCcccHHHhh
Q 009229 270 IYRIFYYINRSGNGHLSLRELK 291 (539)
Q Consensus 270 i~riF~~lD~~~~G~It~~El~ 291 (539)
++.+|..+|.|++|+|+..|+.
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~ 22 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQ 22 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHH
Confidence 4578999999999999999997
No 92
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=94.54 E-value=0.083 Score=54.17 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=74.1
Q ss_pred hhHHHHHhhhccCCCCceeHHHHHHHHHhcCCC-CHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCC
Q 009229 181 FFSTALFRKIDVNNTGLVTRDAFVDYWVNGSML-TMDTATQI-FSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQST 258 (539)
Q Consensus 181 ~~~~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~-~~de~~~~-F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~ 258 (539)
-...++|..||.+.+|.+++.+-...+.-+... ...+..+. |+.|+.+-||++..++|.-+++..+ +++.|.
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l----gv~~l~-- 332 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL----GVEVLR-- 332 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc----Ccceee--
Confidence 345689999999999999999987776654332 22334455 9999999999999999998888442 233332
Q ss_pred hHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHH
Q 009229 259 PEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLID 297 (539)
Q Consensus 259 ~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~ 297 (539)
+.-+|...+...+|+|+..+|+ .++.
T Consensus 333 -----------v~~lf~~i~q~d~~ki~~~~f~--~fa~ 358 (412)
T KOG4666|consen 333 -----------VPVLFPSIEQKDDPKIYASNFR--KFAA 358 (412)
T ss_pred -----------ccccchhhhcccCcceeHHHHH--HHHH
Confidence 4567888899999999999999 4444
No 93
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.01 E-value=0.061 Score=33.36 Aligned_cols=27 Identities=30% Similarity=0.448 Sum_probs=22.4
Q ss_pred HHHHHHHcCCCCCCceeHHHHHHHHHH
Q 009229 396 LEYWFKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 396 i~~~Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
++.+|+.+|.+++|.|+..|+..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 567889999999999999998877653
No 94
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.79 E-value=0.066 Score=46.97 Aligned_cols=55 Identities=18% Similarity=0.254 Sum_probs=44.3
Q ss_pred hcccCCCCCccchhhHhhhcC---------C---C-cchHHHHHHHhccccccccCCCCcccHHHHHH
Q 009229 328 WELDTDHDFLIDKENLIRYGN---------H---A-LTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVY 382 (539)
Q Consensus 328 ~~lD~D~dG~Is~~ef~~~~~---------~---~-ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~ 382 (539)
...|-|+++.|+--|+.+... + + .+...++|++..+.+.-|.|+||.|+|.||+.
T Consensus 74 ~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 74 SMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 367889999999999886321 1 2 35678899999998889999999999999975
No 95
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=93.27 E-value=0.2 Score=37.80 Aligned_cols=45 Identities=18% Similarity=0.432 Sum_probs=20.7
Q ss_pred HHHHHHHHHHh-cCCchhhHHHHHhhhccCCCCceeHHHHHHHHHh
Q 009229 165 IQEFKLVTKEI-CKLPSFFSTALFRKIDVNNTGLVTRDAFVDYWVN 209 (539)
Q Consensus 165 ~~~F~~i~k~~-~~lp~~~~~~LF~~~D~d~~G~Is~~ef~~~~~~ 209 (539)
..+-+.+.+.+ -.+-.-++..||..+|++++|++.-+||..+++.
T Consensus 4 f~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 4 FKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp HHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 33444444432 1333445555666666655666665555555543
No 96
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=92.98 E-value=0.34 Score=54.97 Aligned_cols=128 Identities=19% Similarity=0.287 Sum_probs=92.1
Q ss_pred HhhhhhcccCCCCCccchhhHhhh---cCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHH
Q 009229 323 IYCKFWELDTDHDFLIDKENLIRY---GNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYW 399 (539)
Q Consensus 323 iy~~F~~lD~D~dG~Is~~ef~~~---~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~ 399 (539)
|...|.+.|++.+|.++..+...+ .+..++..-+.++|..+ +...++++...+|+.|....... + .+...
T Consensus 138 i~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~----~~~~~~k~~~~~~~~~~~~~~~r--p-ev~~~ 210 (746)
T KOG0169|consen 138 IHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKES----DNSQTGKLEEEEFVKFRKELTKR--P-EVYFL 210 (746)
T ss_pred HHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHH----HhhccceehHHHHHHHHHhhccC--c-hHHHH
Confidence 444556999999999999887764 45566777788888776 67788999999999988655433 4 78888
Q ss_pred HHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCC----CCCceeHHHHhhcc
Q 009229 400 FKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPE----NQSYITLRDLKGCK 465 (539)
Q Consensus 400 Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~----~dG~ITl~Df~~~~ 465 (539)
|..+= ++.+++|..+|..|+.+... .+.+. .+.+.+|++.+.+. ..+.++++.|.+..
T Consensus 211 f~~~s-~~~~~ls~~~L~~Fl~~~q~------e~~~~-~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL 272 (746)
T KOG0169|consen 211 FVQYS-HGKEYLSTDDLLRFLEEEQG------EDGAT-LDEAEEIIERYEPSKEFRRHGLLSLDGFTRYL 272 (746)
T ss_pred HHHHh-CCCCccCHHHHHHHHHHhcc------ccccc-HHHHHHHHHHhhhhhhccccceecHHHHHHHh
Confidence 88774 44999999999999987622 22222 24456666666443 34568888887753
No 97
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=92.89 E-value=0.14 Score=52.00 Aligned_cols=70 Identities=13% Similarity=0.310 Sum_probs=50.0
Q ss_pred HHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHH-------HHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 396 LEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFED-------ILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 396 i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed-------~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
-+-+|.+.|+++||+++..||+..|..-++.+-.-..+.-...+ +...++..+|.|.|--||+++|.+..
T Consensus 246 PKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t 322 (442)
T KOG3866|consen 246 PKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDT 322 (442)
T ss_pred cchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhh
Confidence 35579999999999999999999997655554221111100111 23567788999999999999998753
No 98
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=92.40 E-value=0.11 Score=53.56 Aligned_cols=82 Identities=12% Similarity=0.157 Sum_probs=57.8
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc-------
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK------- 465 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~------- 465 (539)
..++.+.|..+|.+.||.|+..||..++.... |-++..+|++.|...||.|+-.|+..|-
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~ldkn-------------E~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~~pc 315 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIELDKN-------------EACIKPFFNSCDTYKDGSISTNEWCYCFQKSDPPC 315 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhccCc-------------hhHHHHHHhhhcccccCccccchhhhhhccCCCcc
Confidence 56788888888888888888888887764322 3467788888888888888888887761
Q ss_pred ---------------cchhHHHhhcchHHhhhhhccCh
Q 009229 466 ---------------LSGSVFNILFNLNKFMAFETRDP 488 (539)
Q Consensus 466 ---------------~~~~~~n~l~n~~kf~~~E~rd~ 488 (539)
+.|.|+- ..|...|...+|-..
T Consensus 316 ~~e~~riqk~~~~k~llG~fiP-~CDeeGyYkptQCH~ 352 (434)
T KOG3555|consen 316 QAELCRIQKHDVDKKLLGAFIP-RCDEEGYYKPTQCHG 352 (434)
T ss_pred ccHHHHHHhhhccchhcccccC-CCcccccccchhccC
Confidence 1222222 457778887777544
No 99
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=91.90 E-value=1 Score=51.26 Aligned_cols=133 Identities=14% Similarity=0.259 Sum_probs=76.5
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHh
Q 009229 220 QIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAM 299 (539)
Q Consensus 220 ~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l 299 (539)
.+|...|++++|.+++.+...+++.+... ... .-++++|...+...++++...+++ .+...+
T Consensus 140 ~~~~~ad~~~~~~~~~~~~~~~~~~~n~~------------l~~----~~~~~~f~e~~~~~~~k~~~~~~~--~~~~~~ 201 (746)
T KOG0169|consen 140 SIFQEADKNKNGHMSFDEVLDLLKQLNVQ------------LSE----SKARRLFKESDNSQTGKLEEEEFV--KFRKEL 201 (746)
T ss_pred HHHHHHccccccccchhhHHHHHHHHHHh------------hhH----HHHHHHHHHHHhhccceehHHHHH--HHHHhh
Confidence 34666777777777777777777654221 111 125666777777778888877776 343333
Q ss_pred hhhccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhhhcC-----CCcchHHHHHHHhccccccccCCCCc
Q 009229 300 QHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGN-----HALTYRIVDRIFSQVPRKFTSKVEGK 374 (539)
Q Consensus 300 ~~~~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~-----~~ls~~~i~rif~~~~r~~D~~~dG~ 374 (539)
.... ++..++. .+ .++.+.++.++|.+|.. ...+....+.|+..+-..-...+.+.
T Consensus 202 ~~rp---ev~~~f~---------------~~-s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~ 262 (746)
T KOG0169|consen 202 TKRP---EVYFLFV---------------QY-SHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGL 262 (746)
T ss_pred ccCc---hHHHHHH---------------HH-hCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccce
Confidence 2221 3443333 22 23366777777777532 23445555555554322222345577
Q ss_pred ccHHHHHHHHHhccC
Q 009229 375 MGYEDFVYFILSEED 389 (539)
Q Consensus 375 Idf~EFv~fl~~~~~ 389 (539)
|+++.|..||.+...
T Consensus 263 l~ldgF~~yL~S~~~ 277 (746)
T KOG0169|consen 263 LSLDGFTRYLFSPDC 277 (746)
T ss_pred ecHHHHHHHhcCccC
Confidence 999999999887543
No 100
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.89 E-value=0.77 Score=52.06 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=47.6
Q ss_pred HHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 009229 184 TALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVL 242 (539)
Q Consensus 184 ~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i 242 (539)
..+|++.|+...|.+|-.+-...+.. ...+......++.+-|.|+||.|+-+||.-.|
T Consensus 198 ~QlFNa~DktrsG~Lsg~qaR~aL~q-S~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam 255 (1118)
T KOG1029|consen 198 RQLFNALDKTRSGYLSGQQARSALGQ-SGLPQNQLAHIWTLSDVDGDGKLSADEFILAM 255 (1118)
T ss_pred HHHhhhcccccccccccHHHHHHHHh-cCCchhhHhhheeeeccCCCCcccHHHHHHHH
Confidence 37999999999999998877766643 44566677888999999999999999997654
No 101
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=91.31 E-value=0.29 Score=53.26 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=48.5
Q ss_pred cchhHHHHHhhhhhcccCCCCCccchhhHhhhcCC--CcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhcc
Q 009229 315 FSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNH--ALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEE 388 (539)
Q Consensus 315 FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~~~--~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~ 388 (539)
||.++...+-.+|.++| |++|+|+..++...... ..+-.++..+...+....+.|.+|+|+|++|+..++...
T Consensus 13 ~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~ 87 (627)
T KOG0046|consen 13 LTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK 87 (627)
T ss_pred ccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence 44455555666888999 99999999999863211 112223333333344455789999999999999766543
No 102
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=91.14 E-value=0.17 Score=56.22 Aligned_cols=79 Identities=18% Similarity=0.330 Sum_probs=61.7
Q ss_pred cccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHH
Q 009229 363 VPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILC 442 (539)
Q Consensus 363 ~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~ 442 (539)
+++.+|.+.+|.|+|+++|..+.....+..-++++++|+++|.++| .+..+|.. ..+ -+++..
T Consensus 560 lF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~~---------~e~-------~~~~~~ 622 (671)
T KOG4347|consen 560 LFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEVS---------LEC-------CPELAT 622 (671)
T ss_pred HHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-cccccccc---------ccc-------ChhhhH
Confidence 5567899999999999999999999888889999999999999999 99888871 011 034455
Q ss_pred HHHHhhCCCCCCceeH
Q 009229 443 QIIDMIGPENQSYITL 458 (539)
Q Consensus 443 qi~d~id~~~dG~ITl 458 (539)
.+-+.+....+|..+-
T Consensus 623 ~~~~~l~~~~~~~~~~ 638 (671)
T KOG4347|consen 623 EITEVLGSPSDGDSTT 638 (671)
T ss_pred HHHHHhCCCCCcchhh
Confidence 6666666666666633
No 103
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=90.00 E-value=1.4 Score=37.30 Aligned_cols=72 Identities=18% Similarity=0.300 Sum_probs=48.6
Q ss_pred hHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCC--cHHHHHHHHHHhhCCCCCCceeHHHHhhcccc
Q 009229 393 EPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPV--LFEDILCQIIDMIGPENQSYITLRDLKGCKLS 467 (539)
Q Consensus 393 ~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~--~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~ 467 (539)
.++.+|+|+.+ .|.+|.++..-|..++.+..+.-..+|..+. ..+..+...|..+. ..-+|+.++|..+.+.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~~--~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQVQ--LSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHTT--T-S-B-HHHHHHHHHT
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhcccC--CCCccCHHHHHHHHHh
Confidence 36789999999 7999999999999999998876655554321 24566788888873 4557898888887543
No 104
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=89.87 E-value=0.34 Score=29.82 Aligned_cols=24 Identities=21% Similarity=0.458 Sum_probs=13.3
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHH
Q 009229 220 QIFSILNQPDLKYLTQEDFKPVLR 243 (539)
Q Consensus 220 ~~F~llD~dg~G~Is~~ef~~~i~ 243 (539)
++|..+|.+++|+|+.++|..+++
T Consensus 4 ~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 4 EAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHCCCCCCcEeHHHHHHHHH
Confidence 445555555555555555555544
No 105
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=89.82 E-value=0.63 Score=50.73 Aligned_cols=63 Identities=16% Similarity=0.324 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhh
Q 009229 394 PSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKG 463 (539)
Q Consensus 394 ~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~ 463 (539)
.+++..|.-+| |++|+|+..|+...+....... | -..++++.+++...+++.+|+|++++|.+
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~---g---~~~~eei~~~l~~~~~~~~g~v~fe~f~~ 81 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL---G---YFVREEIKEILGEVGVDADGRVEFEEFVG 81 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc---c---chhHHHHHHHHhccCCCcCCccCHHHHHH
Confidence 46778899999 9999999999998886543221 1 12368899999999999999999999988
No 106
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=88.89 E-value=3.3 Score=39.24 Aligned_cols=77 Identities=12% Similarity=0.162 Sum_probs=55.3
Q ss_pred chHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccchhHH
Q 009229 392 SEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSGSVF 471 (539)
Q Consensus 392 ~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~~~~~ 471 (539)
.+++.+.+|..++..+.+.||..|+..+++.+.....-.|--.-.+|= .-+.-++ .+.+|.+..+++..+--.+.|.
T Consensus 94 vp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW--~~~y~L~-~d~dG~l~Ke~iR~vYDGSlF~ 170 (174)
T PF05042_consen 94 VPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEW--GALYILA-KDKDGFLSKEDIRGVYDGSLFY 170 (174)
T ss_pred CHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHH--HHHHHHH-cCcCCcEeHHHHhhhcchHHHH
Confidence 488999999999999999999999999998876544433433223333 2233334 4569999999999876555544
No 107
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=86.46 E-value=0.35 Score=49.70 Aligned_cols=63 Identities=19% Similarity=0.330 Sum_probs=51.8
Q ss_pred HHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 395 SLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 395 ~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
.+.+.|..+|+|.++.|...|++-|=+-.... -....+...|++-.|.|+|-+||+.|++.|.
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~--------s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKK--------SKPRKCSRKFFKYCDLNKDKKISLDEWRGCL 396 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhh--------ccHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence 57788999999999999999998875433322 1235678899999999999999999999985
No 108
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=85.22 E-value=2.2 Score=40.38 Aligned_cols=64 Identities=9% Similarity=0.293 Sum_probs=42.4
Q ss_pred HHHhccccccccCCCCcccHHHHHHHHHhccCCCc-----hHHHHHH--HHHcCCCCCCceeHHHHHHHHHH
Q 009229 358 RIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSS-----EPSLEYW--FKCIDLDGNGVITRNEMQFFYEE 422 (539)
Q Consensus 358 rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~-----~~~i~~~--Fr~~D~DgDG~Is~~El~~f~~~ 422 (539)
.-|+.++.+++..+.+.+++.|...++........ ...+++. +-+ =.|.||+|++++++..|..
T Consensus 96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L-~~d~dG~l~Ke~iR~vYDG 166 (174)
T PF05042_consen 96 QKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYIL-AKDKDGFLSKEDIRGVYDG 166 (174)
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHH-HcCcCCcEeHHHHhhhcch
Confidence 33444444567777899999999998887543221 2222222 223 3688999999999999864
No 109
>PLN02952 phosphoinositide phospholipase C
Probab=83.82 E-value=2.5 Score=47.69 Aligned_cols=92 Identities=14% Similarity=0.151 Sum_probs=59.8
Q ss_pred CCCcccHHHHHHHHHhccCC--CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHH---HHHHHHH
Q 009229 371 VEGKMGYEDFVYFILSEEDK--SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFE---DILCQII 445 (539)
Q Consensus 371 ~dG~Idf~EFv~fl~~~~~~--~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fe---d~~~qi~ 445 (539)
+.|+++|++|..|......+ ..+..++.+|..+-. +++.|+.++|..|+.+.... ..++.+ .++.+++
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e------~~~~~~~~~~i~~~~~ 85 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDE------LDCTLAEAQRIVEEVI 85 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCC------cCCCHHHHHHHHHHHH
Confidence 45899999999998776433 368899999999854 44789999999999864321 112222 2333333
Q ss_pred HhhCC---CCCCceeHHHHhhcccchh
Q 009229 446 DMIGP---ENQSYITLRDLKGCKLSGS 469 (539)
Q Consensus 446 d~id~---~~dG~ITl~Df~~~~~~~~ 469 (539)
..... .+.+.++++.|.+..+...
T Consensus 86 ~~~~~~~~~~~~~l~~~~F~~~l~s~~ 112 (599)
T PLN02952 86 NRRHHVTRYTRHGLNLDDFFHFLLYDD 112 (599)
T ss_pred hhccccccccccCcCHHHHHHHHcCcc
Confidence 32221 1234588888888665443
No 110
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=83.44 E-value=4.1 Score=45.43 Aligned_cols=75 Identities=13% Similarity=0.212 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcccchhHHHh
Q 009229 394 PSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCKLSGSVFNI 473 (539)
Q Consensus 394 ~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~~~~~~~n~ 473 (539)
+.+...|..+|.|+||-++..||...+...-.. -.-+ -++++. ...+..|.+||+-|... .-.-+
T Consensus 315 ~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~---pW~~-~~~~~~-------t~~~~~G~ltl~g~l~~----WsL~T 379 (625)
T KOG1707|consen 315 RFLVDVFEKFDRDNDGALSPEELKDLFSTAPGS---PWTS-SPYKDS-------TVKNERGWLTLNGFLSQ----WSLMT 379 (625)
T ss_pred HHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCC---CCCC-Cccccc-------ceecccceeehhhHHHH----HHHHh
Confidence 456677999999999999999999888542110 0000 022222 12347899999998753 22335
Q ss_pred hcchHHhhhh
Q 009229 474 LFNLNKFMAF 483 (539)
Q Consensus 474 l~n~~kf~~~ 483 (539)
++|+.++++|
T Consensus 380 lld~~~t~~~ 389 (625)
T KOG1707|consen 380 LLDPRRTLEY 389 (625)
T ss_pred hccHHHHHHH
Confidence 6777666655
No 111
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=82.55 E-value=1.6 Score=35.82 Aligned_cols=60 Identities=17% Similarity=0.327 Sum_probs=40.7
Q ss_pred cccCCCCCccchhhHhhhcC-----CCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccC
Q 009229 329 ELDTDHDFLIDKENLIRYGN-----HALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEED 389 (539)
Q Consensus 329 ~lD~D~dG~Is~~ef~~~~~-----~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~ 389 (539)
.+-. +.+.|+.++|.+|.. ..++...+.+++...-..-.....+.|++.+|..||.+.++
T Consensus 8 ~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~~N 72 (83)
T PF09279_consen 8 KYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSDEN 72 (83)
T ss_dssp HHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHSTTC
T ss_pred HHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCCcC
Confidence 4433 688999999999752 23466777777665311111224699999999999998754
No 112
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=82.39 E-value=2.2 Score=48.97 Aligned_cols=98 Identities=22% Similarity=0.388 Sum_probs=70.9
Q ss_pred CCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCC
Q 009229 372 EGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPE 451 (539)
Q Consensus 372 dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~ 451 (539)
+| |+++||. ..+.+-+.+++-+|.++|. ++|.++.+|+..+......... +..-.....++...++...+++
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 73 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW-LSLIKKQTEEYAALIMEELDPD 73 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh-hhhhhhhhhHHHHHhhhhcccc
Confidence 46 8888888 3455678899999999999 9999999999988876544322 2111123457788999999999
Q ss_pred CCCceeHHHHhhcc--cchhHHHhhcch
Q 009229 452 NQSYITLRDLKGCK--LSGSVFNILFNL 477 (539)
Q Consensus 452 ~dG~ITl~Df~~~~--~~~~~~n~l~n~ 477 (539)
+.|.++++++.-.. ....++..+...
T Consensus 74 ~~~y~~~~~~~~ll~~~~~~~~~~~~~~ 101 (646)
T KOG0039|consen 74 HKGYITNEDLEILLLQIPTLLFAILLSF 101 (646)
T ss_pred ccceeeecchhHHHHhchHHHHHHHHHH
Confidence 99999999987742 333444443333
No 113
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=82.17 E-value=2 Score=35.21 Aligned_cols=59 Identities=22% Similarity=0.317 Sum_probs=47.1
Q ss_pred HHHHhhhccCCCCceeHHHHHHHHHhcC---CCCHHHHHHHHHHhCCC----CCCCCCHHHHHHHHH
Q 009229 184 TALFRKIDVNNTGLVTRDAFVDYWVNGS---MLTMDTATQIFSILNQP----DLKYLTQEDFKPVLR 243 (539)
Q Consensus 184 ~~LF~~~D~d~~G~Is~~ef~~~~~~~~---~~~~de~~~~F~llD~d----g~G~Is~~ef~~~i~ 243 (539)
..||..+.+ +.+.+|.++|..+++... ..+.+.+.+++..+..+ ..+.++.++|..+|.
T Consensus 3 ~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 3 EEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 358888866 788999999999998632 24677888888777543 579999999999997
No 114
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=81.36 E-value=1.7 Score=48.75 Aligned_cols=59 Identities=22% Similarity=0.235 Sum_probs=48.5
Q ss_pred chhhHHHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHH-HHHhCCCCCCCCCHHHH
Q 009229 179 PSFFSTALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQI-FSILNQPDLKYLTQEDF 238 (539)
Q Consensus 179 p~~~~~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~-F~llD~dg~G~Is~~ef 238 (539)
...+..+||..+|.+.+|.+++++|+..+..+..+..-++.++ |.++|.+++ ....++.
T Consensus 553 s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 553 SLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 3567779999999999999999999999988766555555555 899999998 8887776
No 115
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=79.32 E-value=3.6 Score=42.81 Aligned_cols=59 Identities=15% Similarity=0.265 Sum_probs=35.8
Q ss_pred HHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhh---ccHHHHHHHhhccchhHHHHHhhhhhcccCCCCCccchhhHhh
Q 009229 270 IYRIFYYINRSGNGHLSLRELKRGNLIDAMQHA---DEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIR 345 (539)
Q Consensus 270 i~riF~~lD~~~~G~It~~El~~s~~l~~l~~~---~~eedi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~ 345 (539)
++..|..+-.+.++......+.+. ...+... .-...+.=|++ .||++.||.|+..||..
T Consensus 213 L~dWF~~lhe~s~~~~~~ss~~~~--~~~~d~s~~p~CKds~gWMFn---------------klD~N~Dl~Ld~sEl~~ 274 (434)
T KOG3555|consen 213 LRDWFKALHEDSSQNDKTSSLHSA--ASGFDTSILPICKDSLGWMFN---------------KLDTNYDLLLDQSELRA 274 (434)
T ss_pred HHHHHHHHHhhhhccCcchhhccc--ccccccccCcchhhhhhhhhh---------------ccccccccccCHHHhhh
Confidence 566788877777777665555421 1111110 11234555555 88999999888888754
No 116
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=78.56 E-value=1.6 Score=45.03 Aligned_cols=63 Identities=13% Similarity=0.138 Sum_probs=44.2
Q ss_pred HHHhccccccccCCCCcccHHHHHHHHHhccC-CCchHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 358 RIFSQVPRKFTSKVEGKMGYEDFVYFILSEED-KSSEPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 358 rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~-~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
|+..-.|...|+|.++.|+-.|+.-|-...-. .....-.+.+|+..|+|+|-.||..|+...+
T Consensus 333 Rvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 333 RVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCL 396 (421)
T ss_pred heeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence 44444455567787777777766555433322 2345678899999999999999999998765
No 117
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=75.73 E-value=11 Score=42.24 Aligned_cols=25 Identities=24% Similarity=0.272 Sum_probs=19.9
Q ss_pred HHhhhhhcccCCCCCccchhhHhhh
Q 009229 322 VIYCKFWELDTDHDFLIDKENLIRY 346 (539)
Q Consensus 322 ~iy~~F~~lD~D~dG~Is~~ef~~~ 346 (539)
.+-.-|..+|.|+||.++.+||...
T Consensus 316 Fl~~~f~~~D~d~Dg~L~p~El~~L 340 (625)
T KOG1707|consen 316 FLVDVFEKFDRDNDGALSPEELKDL 340 (625)
T ss_pred HHHHHHHhccCCCCCCcCHHHHHHH
Confidence 3444566889999999999999864
No 118
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=73.67 E-value=28 Score=40.14 Aligned_cols=59 Identities=19% Similarity=0.215 Sum_probs=40.4
Q ss_pred HHHHHHHhccCCCC----CCHHHHHHHHHHhcCCchhhHHHHHhhhccCCCCceeHHHHHHHHH
Q 009229 149 LFRINQFFYGHSDG----LQIQEFKLVTKEICKLPSFFSTALFRKIDVNNTGLVTRDAFVDYWV 208 (539)
Q Consensus 149 l~~i~~~F~~~~~~----l~~~~F~~i~k~~~~lp~~~~~~LF~~~D~d~~G~Is~~ef~~~~~ 208 (539)
..+..++|...... ++=.+=..++- .-|+|..--+.|...-|.|+||++++++|+-.+.
T Consensus 194 klKY~QlFNa~DktrsG~Lsg~qaR~aL~-qS~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 194 KLKYRQLFNALDKTRSGYLSGQQARSALG-QSGLPQNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred hhHHHHHhhhcccccccccccHHHHHHHH-hcCCchhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 44567788765332 32222222222 2489998888999999999999999999976544
No 119
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=72.07 E-value=60 Score=38.25 Aligned_cols=146 Identities=16% Similarity=0.214 Sum_probs=84.7
Q ss_pred hcCCchhhHHHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHH-----hCCCCCCCCCHHHHHHHHHH-HHhc
Q 009229 175 ICKLPSFFSTALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSI-----LNQPDLKYLTQEDFKPVLRE-LLAT 248 (539)
Q Consensus 175 ~~~lp~~~~~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~l-----lD~dg~G~Is~~ef~~~i~~-li~~ 248 (539)
+|++-..++..+--++..+..|+|....++......... .++... +-.+.+..|..++|.--.-. ++..
T Consensus 142 ~s~~~fl~K~~tklkmqvn~~grip~knI~k~F~~~k~~-----KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~k 216 (1189)
T KOG1265|consen 142 ASRLTFLFKAHTKLKMQVNFEGRIPVKNIIKTFSADKKE-----KRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNK 216 (1189)
T ss_pred cchhHHHHHHHHhhhhcccccccccHHHHHHHhhcCCch-----hHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHh
Confidence 344444455555566677889999999998887652211 233222 23455567877777543321 1111
Q ss_pred CCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHH-hhccchhHHHHHhhhh
Q 009229 249 HPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKV-LRYFSYEHFYVIYCKF 327 (539)
Q Consensus 249 ~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i-~~~FSyehf~~iy~~F 327 (539)
+- ....|.+||..+..+..-++|..+|. +|+..-. .+..+|++ +.+++......|..+|
T Consensus 217 ------lc---------pR~eie~iF~ki~~~~kpylT~~ql~--dfln~~Q---rDpRLNeilfp~~~~~r~~~lieky 276 (1189)
T KOG1265|consen 217 ------LC---------PRPEIEEIFRKISGKKKPYLTKEQLV--DFLNKKQ---RDPRLNEILFPPADPRRIQSLIEKY 276 (1189)
T ss_pred ------cC---------CchhHHHHHHHhccCCCccccHHHHH--HHHhhhc---cCcchhhhhcCCCCHHHHHHHHHHc
Confidence 00 12448999999998888999999998 6654332 22335543 4666666666666665
Q ss_pred hcccCC--CCCccchhhHhhh
Q 009229 328 WELDTD--HDFLIDKENLIRY 346 (539)
Q Consensus 328 ~~lD~D--~dG~Is~~ef~~~ 346 (539)
. -+.+ ..|.++.+-|.+|
T Consensus 277 E-p~~~~a~~gqms~dgf~ry 296 (1189)
T KOG1265|consen 277 E-PNSDNAEKGQMSTDGFVRY 296 (1189)
T ss_pred C-CchhhhhccccchhhhHHH
Confidence 4 2222 3445555555444
No 120
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=69.39 E-value=18 Score=37.34 Aligned_cols=93 Identities=11% Similarity=0.258 Sum_probs=57.2
Q ss_pred eHHHHHHHHHhcCCCCHH--HHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHH--HHHHHHH
Q 009229 199 TRDAFVDYWVNGSMLTMD--TATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAE--TVIYRIF 274 (539)
Q Consensus 199 s~~ef~~~~~~~~~~~~d--e~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~--~vi~riF 274 (539)
|.+++...|...-....+ +-.-||.+.|.+++|+++..++..+...-+...-.-. .+...+.++--+ ..-..++
T Consensus 225 SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpk--NeeDDM~EmeEErlRMREHVM 302 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPK--NEEDDMKEMEEERLRMREHVM 302 (442)
T ss_pred cHHHHHHHHHHhcCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCC--CcchHHHHHHHHHHHHHHHHH
Confidence 467788888763222111 2346789999999999999999998864433221110 001112111000 1123478
Q ss_pred HhHhcCCCCcccHHHhhhh
Q 009229 275 YYINRSGNGHLSLRELKRG 293 (539)
Q Consensus 275 ~~lD~~~~G~It~~El~~s 293 (539)
..+|.|.+..||+.||..+
T Consensus 303 k~vDtNqDRlvtleEFL~~ 321 (442)
T KOG3866|consen 303 KQVDTNQDRLVTLEEFLND 321 (442)
T ss_pred HhcccchhhhhhHHHHHhh
Confidence 8899999999999999854
No 121
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=68.73 E-value=25 Score=40.55 Aligned_cols=10 Identities=0% Similarity=0.109 Sum_probs=6.3
Q ss_pred CCceeHHHHh
Q 009229 453 QSYITLRDLK 462 (539)
Q Consensus 453 dG~ITl~Df~ 462 (539)
+.+.+.+||-
T Consensus 970 ~kkysmEEFF 979 (1102)
T KOG1924|consen 970 PKKYSMEEFF 979 (1102)
T ss_pred cccCcHHHHH
Confidence 4467777764
No 122
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=62.79 E-value=30 Score=31.97 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=44.2
Q ss_pred ccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHh
Q 009229 368 TSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDM 447 (539)
Q Consensus 368 D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~ 447 (539)
|.+.+|.|++..|...+-. ++--|....=+.+....|.+.+ ..++.+|+++
T Consensus 93 ~~~~n~~i~~~~ff~~lQ~--------~lGdWIT~~~Lkh~n~MSk~Qi---------------------k~L~~~Ii~~ 143 (175)
T PF04876_consen 93 DDSTNGLIDIGKFFDILQP--------KLGDWITKNFLKHPNRMSKDQI---------------------KTLCEQIIEM 143 (175)
T ss_pred cCCcccceeHHHHHHHHHH--------HhhhHHHHHHHhccchhhHHHH---------------------HHHHHHHHHH
Confidence 3445788999999887742 2333333222223333333333 3456777888
Q ss_pred hCCCCCCceeHHHHhhcccchhHHHhhc
Q 009229 448 IGPENQSYITLRDLKGCKLSGSVFNILF 475 (539)
Q Consensus 448 id~~~dG~ITl~Df~~~~~~~~~~n~l~ 475 (539)
++.++...=+|+++. |+++..|.|++.
T Consensus 144 akae~~dtE~Ye~vw-kKmPaY~~nil~ 170 (175)
T PF04876_consen 144 AKAESSDTEHYEKVW-KKMPAYFSNILQ 170 (175)
T ss_pred HhccCCchHHHHHHH-HHhhHHHHHHHH
Confidence 877766566666654 355666666653
No 123
>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed
Probab=62.53 E-value=1.1e+02 Score=36.76 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=27.7
Q ss_pred CCCCCCchhhhHHHhhcCChhhH-HHHHHHHHHhhcC
Q 009229 28 AFKSNPDFGQKLFDQWLSLPEAN-KLVTSLLNDAKAG 63 (539)
Q Consensus 28 ~~~~~~~~~~~lf~~wl~~~~~~-~~~~~~l~~~~~~ 63 (539)
.+.+|.-.||||+.|++.+|... .--++++.+-+.+
T Consensus 3 ~fG~NewlV~e~y~~y~~dp~sVd~~W~~~f~~~~~~ 39 (1228)
T PRK12270 3 EFGQNEWLVEEMYQQYLADPNSVDPSWREFFADYGPG 39 (1228)
T ss_pred CCCcchHHHHHHHHHHhcCccccCHHHHHHHhhcCCC
Confidence 34567778999999999999875 3456777777766
No 124
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=61.02 E-value=9.8 Score=45.05 Aligned_cols=246 Identities=16% Similarity=0.194 Sum_probs=0.0
Q ss_pred HHHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCc-----------
Q 009229 184 TALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGL----------- 252 (539)
Q Consensus 184 ~~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l----------- 252 (539)
..+|..+|...+|.|+..+-..++.. .-.......+++..-|..+.|++....|...++.+-...-+.
T Consensus 14 ~~~~~~~d~~~~G~i~g~~a~~f~~~-s~L~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~~~~~~~ 92 (847)
T KOG0998|consen 14 DQYFKSADPQGDGRITGAEAVAFLSK-SGLPDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAKKVLPAS 92 (847)
T ss_pred HHhhhccCcccCCcccHHHhhhhhhc-cccchhhhhccccccccccCCccccccccccchHhhhhhcccCcCcccccccc
Q ss_pred -------ccccCChHHHHh--------------hHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccHHHHHHH
Q 009229 253 -------EFLQSTPEFQER--------------YAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEEEDINKV 311 (539)
Q Consensus 253 -------~fL~~~~ef~~~--------------y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~eedi~~i 311 (539)
.++...+..+.. --......+|..+.++ +|.++-.-.+ ..-+.......-+.++
T Consensus 93 ~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~----pil~~s~Lp~~~l~~i 167 (847)
T KOG0998|consen 93 AVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPS-NGLLSGDKAK----PILLNSKLPSDVLGRI 167 (847)
T ss_pred CCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCC-CCccccchhh----hhhhcCCCChhhhccc
Q ss_pred hhccchhHHHHHhhhhhcccCCCCCccchhhHh-------------------hhcCCCcchHHHH---------------
Q 009229 312 LRYFSYEHFYVIYCKFWELDTDHDFLIDKENLI-------------------RYGNHALTYRIVD--------------- 357 (539)
Q Consensus 312 ~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~-------------------~~~~~~ls~~~i~--------------- 357 (539)
-. --|.|.+|.+++.++. ++....+.+....
T Consensus 168 w~---------------l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~ 232 (847)
T KOG0998|consen 168 WE---------------LSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQP 232 (847)
T ss_pred cc---------------cccccccCCCChhhhhhhhhHHHHHhhcccCCCCccCCcccCCcchhcccccCcccccccccc
Q ss_pred --------HHHhccccccccCCCCcccHHHHHHHHHhccCC------CchHHHHHHHHHcCCCCCCceeHHHHHHHHHHH
Q 009229 358 --------RIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDK------SSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQ 423 (539)
Q Consensus 358 --------rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~------~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~ 423 (539)
..+..+...-+.+.++.++=.++..-+...... .......++|...|.+.||.|+..+....+..
T Consensus 233 ~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~- 311 (847)
T KOG0998|consen 233 FLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLP- 311 (847)
T ss_pred cccccccccccccccchhcccCCccccccccccccccccccCcccChHHHHHHHHHHHhccccCCCccccccccccccc-
Q ss_pred HHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHH
Q 009229 424 LHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDL 461 (539)
Q Consensus 424 ~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df 461 (539)
..+.. +.+.+++..++..+.|.|++++|
T Consensus 312 -~gl~~---------~~l~~~w~l~d~~n~~~ls~~ef 339 (847)
T KOG0998|consen 312 -FGLSK---------PRLAHVWLLADTQNTGTLSKDEF 339 (847)
T ss_pred -CCCCh---------hhhhhhhhhcchhccCccccccc
No 125
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=60.17 E-value=13 Score=40.58 Aligned_cols=65 Identities=17% Similarity=0.340 Sum_probs=54.7
Q ss_pred HHHhhhccCCCCceeHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCC
Q 009229 185 ALFRKIDVNNTGLVTRDAFVDYWVNGSMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHP 250 (539)
Q Consensus 185 ~LF~~~D~d~~G~Is~~ef~~~~~~~~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p 250 (539)
.-|+.+..|..|+|+-..-.+|+.+ .+....++.-++.+.|.+.||.|+..||...+.-++...-
T Consensus 235 nQFrtvQpDp~gfisGsaAknFFtK-Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaRkN 299 (737)
T KOG1955|consen 235 NQFRTVQPDPHGFISGSAAKNFFTK-SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVARKN 299 (737)
T ss_pred hhhhcccCCcccccccHHHHhhhhh-ccCchHHHHHHHhhcccCccccccHHHHHhhHhheeeccc
Confidence 3688889999999998888888765 4667788999999999999999999999999876665443
No 126
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=59.53 E-value=6.8 Score=37.86 Aligned_cols=54 Identities=20% Similarity=0.416 Sum_probs=41.6
Q ss_pred HHHcCC-CCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 400 FKCIDL-DGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 400 Fr~~D~-DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
|-.+|. -.||++|..||.-+ .-..++.+.++...|.-.|.|+||.|++.|+-.|
T Consensus 193 f~qld~~p~d~~~sh~el~pl-----------~ap~ipme~c~~~f~e~cd~~nd~~ial~ew~~c 247 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPL-----------RAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC 247 (259)
T ss_pred eccccCCCccccccccccccc-----------cCCcccHHhhchhhhhcccCCCCCceeHHHhhcc
Confidence 333443 36899999997631 1223577889999999999999999999999887
No 127
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=56.08 E-value=26 Score=41.22 Aligned_cols=92 Identities=14% Similarity=0.198 Sum_probs=63.1
Q ss_pred cccccccCCCCcccHHHHHHHHHhccCCCc--hHHHHHHHHHc---CCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcH
Q 009229 363 VPRKFTSKVEGKMGYEDFVYFILSEEDKSS--EPSLEYWFKCI---DLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLF 437 (539)
Q Consensus 363 ~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~--~~~i~~~Fr~~---D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~f 437 (539)
+++-++....|.+++++|.+.++....... ++-+..||+++ |.++-|.++..++..++..-...+.. -
T Consensus 752 le~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~~-------~ 824 (890)
T KOG0035|consen 752 LENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLDT-------E 824 (890)
T ss_pred HHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhcH-------H
Confidence 456678888899999999999998866543 67789999977 66667999999999888643332211 1
Q ss_pred HHHHHHHHHhhCCCCCCceeHHHHhh
Q 009229 438 EDILCQIIDMIGPENQSYITLRDLKG 463 (539)
Q Consensus 438 ed~~~qi~d~id~~~dG~ITl~Df~~ 463 (539)
..++..+=|..+... +|+++|+.+
T Consensus 825 ~r~i~s~~d~~ktk~--~lL~eEL~~ 848 (890)
T KOG0035|consen 825 LRAILAFEDWAKTKA--YLLLEELVR 848 (890)
T ss_pred HHHHHHHHHHHcchh--HHHHHHHHh
Confidence 223333333344332 788888876
No 128
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=55.21 E-value=50 Score=28.01 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=41.6
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHHhh
Q 009229 219 TQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRELK 291 (539)
Q Consensus 219 ~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~El~ 291 (539)
.-+|+++ .|.+|.++...|..++++++.-- ..+.+.+.|.. ++..++..|... ..+..|+..+|.
T Consensus 6 RylFsli-sd~~g~~~~~~l~~lL~d~lqip---~~vgE~~aFg~--~e~sv~sCF~~~--~~~~~I~~~~Fl 70 (90)
T PF09069_consen 6 RYLFSLI-SDSNGCMDQRKLGLLLHDVLQIP---RAVGEGPAFGY--IEPSVRSCFQQV--QLSPKITENQFL 70 (90)
T ss_dssp HHHHHHH-S-TTS-B-HHHHHHHHHHHHHHH---HHTT-GGGGT----HHHHHHHHHHT--TT-S-B-HHHHH
T ss_pred HHHHHHH-cCCCCCCcHHHHHHHHHHHHHHH---HHhCccccccC--cHHHHHHHhccc--CCCCccCHHHHH
Confidence 4458888 78899999999999999876421 12445566654 888899999876 366788888887
No 129
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=50.82 E-value=22 Score=28.67 Aligned_cols=29 Identities=17% Similarity=0.300 Sum_probs=25.4
Q ss_pred CchHHHHHHHHHcCCCCCCceeHHHHHHHH
Q 009229 391 SSEPSLEYWFKCIDLDGNGVITRNEMQFFY 420 (539)
Q Consensus 391 ~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~ 420 (539)
.+.+.+...||.+ .++.++||..||+.-+
T Consensus 3 ~s~eqv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 3 DSAEQVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp STCHHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred CCHHHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 4678899999999 8999999999999643
No 130
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=50.77 E-value=6.8 Score=37.84 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=20.9
Q ss_pred HHHHHhhhhhcccC-CCCCccchhhHhhhcC
Q 009229 319 HFYVIYCKFWELDT-DHDFLIDKENLIRYGN 348 (539)
Q Consensus 319 hf~~iy~~F~~lD~-D~dG~Is~~ef~~~~~ 348 (539)
|+|-+.=+|-+||+ -+||++|-.||.-...
T Consensus 185 ~i~pv~wqf~qld~~p~d~~~sh~el~pl~a 215 (259)
T KOG4004|consen 185 YIFPVHWQFGQLDQHPIDGYLSHTELAPLRA 215 (259)
T ss_pred eeeeeeeeeccccCCCccccccccccccccC
Confidence 44444446888997 5899999888865433
No 131
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=48.87 E-value=23 Score=30.53 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=28.4
Q ss_pred HhhhhhcccCCCCCccchhhHhhhcCCCcchHHHHHHHhcccc
Q 009229 323 IYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPR 365 (539)
Q Consensus 323 iy~~F~~lD~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r 365 (539)
+..+|.+|-. ||+|.+.+|....+-.-|..+...+|..+.|
T Consensus 32 VE~RFd~La~--dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaR 72 (100)
T PF08414_consen 32 VEKRFDKLAK--DGLLPRSDFGECIGMKDSKEFAGELFDALAR 72 (100)
T ss_dssp HHHHHHHH-B--TTBEEGGGHHHHHT--S-HHHHHHHHHHHHH
T ss_pred HHHHHHHhCc--CCcccHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 4446667776 8999999999877655677888888876544
No 132
>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]
Probab=47.91 E-value=77 Score=36.88 Aligned_cols=16 Identities=6% Similarity=0.167 Sum_probs=7.7
Q ss_pred CCCCCceeHHHHHHHH
Q 009229 405 LDGNGVITRNEMQFFY 420 (539)
Q Consensus 405 ~DgDG~Is~~El~~f~ 420 (539)
++.--.++.++|+.-+
T Consensus 888 v~kaSrvnad~ikK~~ 903 (1102)
T KOG1924|consen 888 VEKASRVNADEIKKNL 903 (1102)
T ss_pred HHhhccccHHHHHHHH
Confidence 3444445555555444
No 133
>PLN02952 phosphoinositide phospholipase C
Probab=47.76 E-value=1e+02 Score=35.21 Aligned_cols=51 Identities=10% Similarity=0.085 Sum_probs=39.3
Q ss_pred CCCceeHHHHHHHHHhcC---CCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 009229 194 NTGLVTRDAFVDYWVNGS---MLTMDTATQIFSILNQPDLKYLTQEDFKPVLREL 245 (539)
Q Consensus 194 ~~G~Is~~ef~~~~~~~~---~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~l 245 (539)
..|.+++++|.++.+.+. .....++..+|..|..++ +.++.++|..++...
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~ 66 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLH 66 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHh
Confidence 468999999988876543 235678889998886544 689999999999854
No 134
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=46.47 E-value=53 Score=30.53 Aligned_cols=45 Identities=18% Similarity=0.385 Sum_probs=25.7
Q ss_pred CCHHHHHHHHHHhcCC-----chhhHHHHHhhhccCCCCceeHHHHHHHHH
Q 009229 163 LQIQEFKLVTKEICKL-----PSFFSTALFRKIDVNNTGLVTRDAFVDYWV 208 (539)
Q Consensus 163 l~~~~F~~i~k~~~~l-----p~~~~~~LF~~~D~d~~G~Is~~ef~~~~~ 208 (539)
|+-..|.+++++ ||+ ..--...+|.++-..+..+|++++|...+.
T Consensus 19 m~~~~F~Kl~kD-~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 19 MDSKNFAKLCKD-CGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALA 68 (154)
T ss_dssp EEHHHHHHHHHH-TSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHH
T ss_pred ccHHHHHHHHHH-cCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHH
Confidence 666777777775 332 333444666665555555577777666654
No 135
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=44.34 E-value=1e+02 Score=36.45 Aligned_cols=91 Identities=19% Similarity=0.254 Sum_probs=51.5
Q ss_pred CCceeHHHH--HHHHHhcCCCCH-HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHH
Q 009229 195 TGLVTRDAF--VDYWVNGSMLTM-DTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIY 271 (539)
Q Consensus 195 ~G~Is~~ef--~~~~~~~~~~~~-de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~ 271 (539)
...|..++| ..|.+.+...|. .++.++|..+-.++.-|+|.++|..+|..- ...|.|+-+-- |-+..+ -++
T Consensus 197 ~dsI~~d~f~~e~f~~~l~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~-QrDpRLNeilf-p~~~~~----r~~ 270 (1189)
T KOG1265|consen 197 NDSIEPDDFTLEKFYRLLNKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKK-QRDPRLNEILF-PPADPR----RIQ 270 (1189)
T ss_pred cCccChhhccHHHHHHHHHhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhh-ccCcchhhhhc-CCCCHH----HHH
Confidence 445665554 333333333332 568899999998988999999999999742 12333432111 111111 144
Q ss_pred HHHHhHhcC----CCCcccHHHhh
Q 009229 272 RIFYYINRS----GNGHLSLRELK 291 (539)
Q Consensus 272 riF~~lD~~----~~G~It~~El~ 291 (539)
.+...+..+ .+|.|+.+-|.
T Consensus 271 ~liekyEp~~~~a~~gqms~dgf~ 294 (1189)
T KOG1265|consen 271 SLIEKYEPNSDNAEKGQMSTDGFV 294 (1189)
T ss_pred HHHHHcCCchhhhhccccchhhhH
Confidence 444444443 36777777665
No 136
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.12 E-value=32 Score=37.69 Aligned_cols=54 Identities=19% Similarity=0.409 Sum_probs=41.2
Q ss_pred HHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 400 FKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 400 Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
||-+-.|-.|+|+..--+.||..- . +++++ +..|+...|.+.||-+||.||...
T Consensus 237 FrtvQpDp~gfisGsaAknFFtKS-----k-----lpi~E-LshIWeLsD~d~DGALtL~EFcAA 290 (737)
T KOG1955|consen 237 FRTVQPDPHGFISGSAAKNFFTKS-----K-----LPIEE-LSHIWELSDVDRDGALTLSEFCAA 290 (737)
T ss_pred hhcccCCcccccccHHHHhhhhhc-----c-----CchHH-HHHHHhhcccCccccccHHHHHhh
Confidence 777788888999988888888531 1 23333 578888899999999999999764
No 137
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=40.19 E-value=43 Score=32.34 Aligned_cols=63 Identities=17% Similarity=0.118 Sum_probs=47.0
Q ss_pred CCCCCccchhhHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHH
Q 009229 332 TDHDFLIDKENLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFK 401 (539)
Q Consensus 332 ~D~dG~Is~~ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr 401 (539)
+|=||.||.+|...|....+.+.....+++++. +++|++.+.+..|+..-..+.++.++.+-+
T Consensus 8 sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vl-------s~tiS~rd~~g~mf~~i~~s~~Eile~llk 70 (220)
T COG4359 8 SDFDGTITLNDSNDYITDTFGPGEWKALKDGVL-------SKTISFRDGFGRMFGSIHSSLEEILEFLLK 70 (220)
T ss_pred ecCCCceEecchhHHHHhccCchHHHHHHHHHh-------hCceeHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 466899999999998776666556667777753 589999999888877655555666666555
No 138
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=38.66 E-value=26 Score=21.52 Aligned_cols=15 Identities=20% Similarity=0.665 Sum_probs=11.3
Q ss_pred CCCCCCceeHHHHHH
Q 009229 404 DLDGNGVITRNEMQF 418 (539)
Q Consensus 404 D~DgDG~Is~~El~~ 418 (539)
|+|+||.|+.-++..
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 789999998877653
No 139
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=34.77 E-value=1.2e+02 Score=25.58 Aligned_cols=49 Identities=20% Similarity=0.148 Sum_probs=34.6
Q ss_pred CcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHH
Q 009229 373 GKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYE 421 (539)
Q Consensus 373 G~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~ 421 (539)
--|.+.+|...+..............+=..+|+-+||+||..|+.-|.+
T Consensus 21 ~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtR 69 (85)
T PF02761_consen 21 TIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTR 69 (85)
T ss_dssp SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred eEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHH
Confidence 4578999999887765554443333334478999999999999998765
No 140
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=33.77 E-value=1.3e+02 Score=35.63 Aligned_cols=105 Identities=19% Similarity=0.166 Sum_probs=69.8
Q ss_pred HhhHHHHHHHHHHhHhcCCCCcccHHHhhhhhHHHHhhhhccH-HHHHHHhhccchhHHHHHhhhhhcccCCCCCccchh
Q 009229 263 ERYAETVIYRIFYYINRSGNGHLSLRELKRGNLIDAMQHADEE-EDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKE 341 (539)
Q Consensus 263 ~~y~~~vi~riF~~lD~~~~G~It~~El~~s~~l~~l~~~~~e-edi~~i~~~FSyehf~~iy~~F~~lD~D~dG~Is~~ 341 (539)
..|+...++..|..+++...|.++..++.+ .+-.++....+ +.+. ..||
T Consensus 742 sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~--~Lmslg~~~e~ee~~~--~e~~-------------------------- 791 (890)
T KOG0035|consen 742 SQYVLDELRALENEQDKIDGGAASPEELLR--CLMSLGYNTEEEEQGI--AEWF-------------------------- 791 (890)
T ss_pred hHHHHHHHHHHHhHHHHhhcccCCHHHHHH--HHHhcCcccchhHHHH--HHHH--------------------------
Confidence 347788899999999999999999999984 45555554332 2111 1111
Q ss_pred hHhhhcCCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhc-cCCCchHHHHHHHHHcCCCCCCceeHHHHHH
Q 009229 342 NLIRYGNHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSE-EDKSSEPSLEYWFKCIDLDGNGVITRNEMQF 418 (539)
Q Consensus 342 ef~~~~~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~-~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~ 418 (539)
|+ +..-|.+.-|.++|.+|..+|... ++..+...+-..|+.+=++.. +|..+||..
T Consensus 792 ----------------~l----vn~~n~l~~~qv~~~e~~ddl~R~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 792 ----------------RL----VNKKNPLIQGQVQLLEFEDDLEREYEDLDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred ----------------HH----HhccCcccccceeHHHHHhHhhhhhhhhcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 11 111233445788899999888654 566677778888888766655 788888876
No 141
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=31.12 E-value=64 Score=39.70 Aligned_cols=77 Identities=21% Similarity=0.334 Sum_probs=0.0
Q ss_pred HHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc------ccchhHHHh
Q 009229 400 FKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC------KLSGSVFNI 473 (539)
Q Consensus 400 Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~------~~~~~~~n~ 473 (539)
|+-||.||.|+||..|+..-++.+.+.-.. .++-++..+..+.+..+.|+||..- -..-++.-+
T Consensus 4063 fkeydpdgkgiiskkdf~kame~~k~ytqs----------e~dfllscae~dend~~~y~dfv~rfhepakdigfnvavl 4132 (5019)
T KOG2243|consen 4063 FKEYDPDGKGIISKKDFHKAMEGHKHYTQS----------EIDFLLSCAEADENDMFDYEDFVDRFHEPAKDIGFNVAVL 4132 (5019)
T ss_pred chhcCCCCCccccHHHHHHHHhccccchhH----------HHHHHHHhhccCccccccHHHHHHHhcCchhhcCcchhhh
Q ss_pred hcchHHhhhhhcc
Q 009229 474 LFNLNKFMAFETR 486 (539)
Q Consensus 474 l~n~~kf~~~E~r 486 (539)
|.|+...+-...|
T Consensus 4133 ltnlsehmpndsr 4145 (5019)
T KOG2243|consen 4133 LTNLSEHMPNDSR 4145 (5019)
T ss_pred hhhhHhhCCCchh
No 142
>PF05819 NolX: NolX protein; InterPro: IPR008718 This family consists of Rhizobium NolX and Xanthomonas HrpF proteins. The interaction between the plant pathogen Xanthomonas campestris pv. vesicatoria (strain 85-10) and its host plants is controlled by hrp genes (hypersensitive reaction and pathogenicity), which encode a type III protein secretion system. Among type III-secreted proteins are avirulence proteins, effectors involved in the induction of plant defence reactions. HrpF is dispensable for protein secretion but required for AvrBs3 recognition in planta, is thought to function as a translocator of effector proteins into the host cell []. NolX, a Glycine max (Soybean) cultivar specificity protein, is secreted by a type III secretion system (TTSS) and shows homology to HrpF. It is not known whether NolX functions at the bacterium-plant interface or acts inside the host cell. NolX is expressed in planta only during the early stages of nodule development [].; GO: 0009877 nodulation
Probab=30.01 E-value=7.6e+02 Score=27.57 Aligned_cols=96 Identities=14% Similarity=0.233 Sum_probs=58.5
Q ss_pred HHHHHHHHHhccCCCCCCHHHHHHHHHH---hcCCchh-hHH-HHH-------hhhccCCCCceeHHHHHHHHHhcCCCC
Q 009229 147 QCLFRINQFFYGHSDGLQIQEFKLVTKE---ICKLPSF-FST-ALF-------RKIDVNNTGLVTRDAFVDYWVNGSMLT 214 (539)
Q Consensus 147 ~~l~~i~~~F~~~~~~l~~~~F~~i~k~---~~~lp~~-~~~-~LF-------~~~D~d~~G~Is~~ef~~~~~~~~~~~ 214 (539)
..++++-..-.-.|..++++.|++|+.- .-+||.- .+. .-| ..+-.+.++.|+..+|+..-..-...+
T Consensus 368 DA~RELYrYSdyLPK~L~~~~f~~IVdG~s~tgKcPPQViAAAqyF~~hpd~W~~l~~g~~~~v~k~dflq~ass~m~LT 447 (624)
T PF05819_consen 368 DAMRELYRYSDYLPKNLSLEDFKQIVDGDSKTGKCPPQVIAAAQYFVDHPDEWKQLYGGPSDKVSKEDFLQVASSSMHLT 447 (624)
T ss_pred HHHHHHHHhhhccccccCHHHHHhHhcCccccCCCCHHHHHHHHHHHhChHHHHHhcCCCccccchhHHHHHHHhhcccC
Confidence 3444444433344666999999999862 1367642 333 222 334345688999999998876655666
Q ss_pred HHHHHHHHHHhCCC-----CCC-CCCHHHHHHHHH
Q 009229 215 MDTATQIFSILNQP-----DLK-YLTQEDFKPVLR 243 (539)
Q Consensus 215 ~de~~~~F~llD~d-----g~G-~Is~~ef~~~i~ 243 (539)
.++..-+ ..+..+ |+| -|+.+.+..+..
T Consensus 448 ~~ElkTL-~Tin~nqd~FFg~G~~ltrdKLa~ma~ 481 (624)
T PF05819_consen 448 APELKTL-DTINSNQDAFFGDGKELTRDKLASMAD 481 (624)
T ss_pred hHHHHHH-HHhhhchhhhhCCccccCHHHHHHhhc
Confidence 6554333 112221 566 799999988765
No 143
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=29.63 E-value=42 Score=37.62 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=49.3
Q ss_pred HHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhcc
Q 009229 396 LEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGCK 465 (539)
Q Consensus 396 i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~~ 465 (539)
.+--|..+|.|..|+++..++...++++...+ + ++.+.+++..++.+-.|.+.+.||.+.+
T Consensus 595 ~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~-----d----~~~~~~~l~ea~~~~~g~v~l~e~~q~~ 655 (680)
T KOG0042|consen 595 RKTRFAFLDADKKAYQAIADVLKVLKSENVGW-----D----EDRLHEELQEADENLNGFVELREFLQLM 655 (680)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHhcCCC-----C----HHHHHHHHHHHHHhhcceeeHHHHHHHH
Confidence 34558899999999999999998887654222 1 5788999999999999999999987754
No 144
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=28.97 E-value=3.5e+02 Score=22.75 Aligned_cols=69 Identities=17% Similarity=0.267 Sum_probs=49.6
Q ss_pred CceeHHHHHHHHHhc-CCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhcCCCcccccCChHHHHhhHHHHHHHHH
Q 009229 196 GLVTRDAFVDYWVNG-SMLTMDTATQIFSILNQPDLKYLTQEDFKPVLRELLATHPGLEFLQSTPEFQERYAETVIYRIF 274 (539)
Q Consensus 196 G~Is~~ef~~~~~~~-~~~~~de~~~~F~llD~dg~G~Is~~ef~~~i~~li~~~p~l~fL~~~~ef~~~y~~~vi~riF 274 (539)
..||.+||+.|-+.. ...+...+..+...+....=+-...++=..++.++-. ..+..+...+.++|
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkeia~-------------iT~p~ta~~vn~Lf 79 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEIAK-------------ITSPQTAKQVNELF 79 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH-------------hcCHHHHHHHHHHH
Confidence 468999999998774 4678888899999998877778888888888876521 12233444577777
Q ss_pred HhH
Q 009229 275 YYI 277 (539)
Q Consensus 275 ~~l 277 (539)
..+
T Consensus 80 ~qf 82 (85)
T PF11116_consen 80 EQF 82 (85)
T ss_pred HHH
Confidence 654
No 145
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=27.05 E-value=75 Score=35.71 Aligned_cols=75 Identities=12% Similarity=0.179 Sum_probs=56.1
Q ss_pred ccchhHHHHHhhhhhcccCCCCCccchhhHhhhc---CCCcchHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCC
Q 009229 314 YFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYG---NHALTYRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDK 390 (539)
Q Consensus 314 ~FSyehf~~iy~~F~~lD~D~dG~Is~~ef~~~~---~~~ls~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~ 390 (539)
..+.+.|....++|..+|.|+.|.++.++..+.. +...+....+++..++ |.+.+|.+...||..++.+...+
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea----~~~~~g~v~l~e~~q~~s~~~~g 661 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEA----DENLNGFVELREFLQLMSAIKNG 661 (680)
T ss_pred ccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH----HHhhcceeeHHHHHHHHHHHhcC
Confidence 3567889999999999999999999998887642 1245555666665543 55668999999998888876555
Q ss_pred Cc
Q 009229 391 SS 392 (539)
Q Consensus 391 ~~ 392 (539)
.+
T Consensus 662 ~~ 663 (680)
T KOG0042|consen 662 CT 663 (680)
T ss_pred Ch
Confidence 44
No 146
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=26.96 E-value=1.8e+02 Score=31.05 Aligned_cols=56 Identities=25% Similarity=0.445 Sum_probs=48.7
Q ss_pred CCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHH
Q 009229 371 VEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHR 426 (539)
Q Consensus 371 ~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~ 426 (539)
++..+.++.++--....+.+...+..+.+...+|++|+|+++...+.+++...+..
T Consensus 71 q~~~~~l~k~~~~~~~~~~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks 126 (427)
T KOG2557|consen 71 QDDKMTLEKLVIAKATYEKGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKS 126 (427)
T ss_pred CCccchHHHHhhHHhhhccCcccHHHHHHHHHHhhccccccchhHHHHHHHHHhhh
Confidence 45689999999888877888888999999999999999999999999998876554
No 147
>PHA03185 UL14 tegument protein; Provisional
Probab=26.39 E-value=2e+02 Score=28.01 Aligned_cols=21 Identities=29% Similarity=0.477 Sum_probs=14.9
Q ss_pred hhcCChhhHHHHHHHHHHhhc
Q 009229 42 QWLSLPEANKLVTSLLNDAKA 62 (539)
Q Consensus 42 ~wl~~~~~~~~~~~~l~~~~~ 62 (539)
-||+..+---|++=+|+.+-.
T Consensus 139 ~wl~e~DEaLLt~W~Le~aP~ 159 (214)
T PHA03185 139 GWMSPEDSDLLIMWQLGSAPA 159 (214)
T ss_pred ccccccHHHHHHHHHHhcCCC
Confidence 377777777777777876643
No 148
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=26.09 E-value=77 Score=27.40 Aligned_cols=58 Identities=21% Similarity=0.379 Sum_probs=38.2
Q ss_pred HHHHHHhccCC-CC-CCHHHHHHHHHHhcCC--chhhHHHHHhhhccC---CCCceeHHHHHHHHHhcC
Q 009229 150 FRINQFFYGHS-DG-LQIQEFKLVTKEICKL--PSFFSTALFRKIDVN---NTGLVTRDAFVDYWVNGS 211 (539)
Q Consensus 150 ~~i~~~F~~~~-~~-l~~~~F~~i~k~~~~l--p~~~~~~LF~~~D~d---~~G~Is~~ef~~~~~~~~ 211 (539)
..|+..|.... +| |....|++.+ |+ ..-|+..||.++-.- ....|+.+|+..+|..+.
T Consensus 30 ~~VE~RFd~La~dG~L~rs~Fg~CI----GM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qis 94 (100)
T PF08414_consen 30 KEVEKRFDKLAKDGLLPRSDFGECI----GMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQIS 94 (100)
T ss_dssp HHHHHHHHHH-BTTBEEGGGHHHHH----T--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCCcccHHHHHHhc----CCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhh
Confidence 34555565432 45 7899999433 55 478999999988642 246799999999997653
No 149
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=25.07 E-value=5.5e+02 Score=23.69 Aligned_cols=97 Identities=12% Similarity=0.166 Sum_probs=48.9
Q ss_pred CCcccHHHHHHHHHhc---cCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhhccCCCCcHHHHHHHHHHhh
Q 009229 372 EGKMGYEDFVYFILSE---EDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMI 448 (539)
Q Consensus 372 dG~Idf~EFv~fl~~~---~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~~~~e~~~fed~~~qi~d~i 448 (539)
...|+=..|..+|... ..+-+...+..+|..+=..+...|+.+++..++.++.+.. +.....+++++..|...-
T Consensus 16 ~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~---~~~~~~~~~~~~kl~~~~ 92 (154)
T PF05517_consen 16 GTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKK---GKDKSSAEELKEKLTAGG 92 (154)
T ss_dssp SSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHH---SCCCTHHHHHHHHHHTT-
T ss_pred cccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHh---hcccccHHHHHHHHHccC
Confidence 3456666666666542 2345667777777776555556688888777776655542 221114566666666666
Q ss_pred CCCCCCceeHHHHhhcccchhHHHhhcchHHhh
Q 009229 449 GPENQSYITLRDLKGCKLSGSVFNILFNLNKFM 481 (539)
Q Consensus 449 d~~~dG~ITl~Df~~~~~~~~~~n~l~n~~kf~ 481 (539)
.|.-.| ......+.-|.|..+|-
T Consensus 93 ~P~~~g----------~~~~~~v~rltD~s~YT 115 (154)
T PF05517_consen 93 GPSASG----------ATKAGAVDRLTDKSTYT 115 (154)
T ss_dssp -SSSSS-----------TTS------SSSS-ST
T ss_pred cccccc----------ccccccccccCCCCccc
Confidence 666555 22334455566666653
No 150
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=24.87 E-value=75 Score=36.72 Aligned_cols=107 Identities=12% Similarity=0.128 Sum_probs=71.0
Q ss_pred hHHHHHHHhccccccccCCCCcccHHHHHHHHHhccCCCchHHHHHHHHHcCCCCCCceeHHHHHHHHHHHHHHhhh---
Q 009229 353 YRIVDRIFSQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFYEEQLHRMEC--- 429 (539)
Q Consensus 353 ~~~i~rif~~~~r~~D~~~dG~Idf~EFv~fl~~~~~~~~~~~i~~~Fr~~D~DgDG~Is~~El~~f~~~~~~~l~~--- 429 (539)
+..+|+-.+-+.+.||..++|+|..-+|...++..+.....+.++|+|+.+--++.-.+ ..-|...+.+..+..+.
T Consensus 465 ~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE 543 (966)
T KOG4286|consen 465 PLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGE 543 (966)
T ss_pred chHHHHHHHHHHHhcccCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhH
Confidence 44566665656677999999999999999999999988889999999999876776665 66666666554443332
Q ss_pred ---ccCCCCcHHHHHHHHHHhhCCCCCCceeHHHHhhc
Q 009229 430 ---MAQEPVLFEDILCQIIDMIGPENQSYITLRDLKGC 464 (539)
Q Consensus 430 ---~~~e~~~fed~~~qi~d~id~~~dG~ITl~Df~~~ 464 (539)
+|...+ +--+.+-|.-+ ++--.|....|...
T Consensus 544 ~aAfGgsNv--epsvrsCF~~v--~~~pei~~~~f~dw 577 (966)
T KOG4286|consen 544 VAAFGGSNI--EPSVRSCFQFV--NNKPEIEAALFLDW 577 (966)
T ss_pred HHhhcCCCC--ChHHHHHHHhc--CCCCcchHHHHHHH
Confidence 333322 12234445422 33345666666553
No 151
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=24.58 E-value=2.6e+02 Score=25.11 Aligned_cols=81 Identities=11% Similarity=0.200 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCC--CCCCHHHHHHHHHHHH----hcCCCcccccCChHHHHhhHHHHHHHHHHhHhcCCCCcccHHH
Q 009229 216 DTATQIFSILNQPDL--KYLTQEDFKPVLRELL----ATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGHLSLRE 289 (539)
Q Consensus 216 de~~~~F~llD~dg~--G~Is~~ef~~~i~~li----~~~p~l~fL~~~~ef~~~y~~~vi~riF~~lD~~~~G~It~~E 289 (539)
..+...|.....+.. ..|+..++..++.++. +.+|...-+...| -+.-++..+.=++..+|+.++|+|+.-.
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~--v~~a~~L~ln~Ll~vyD~~rtG~I~vls 118 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRP--VDLAVDLLLNWLLNVYDSQRTGKIRVLS 118 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-------HHHHHHHHHHHHHH-TT--SEEEHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHHHHHHHHHhCCCCCCeeehhH
Q ss_pred hhhhhHHHHhh
Q 009229 290 LKRGNLIDAMQ 300 (539)
Q Consensus 290 l~~s~~l~~l~ 300 (539)
++ -.+..|.
T Consensus 119 ~K--vaL~~Lc 127 (127)
T PF09068_consen 119 FK--VALITLC 127 (127)
T ss_dssp HH--HHHHHTS
T ss_pred HH--HHHHHhC
Done!