BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009233
(539 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545394|ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus communis]
gi|223546843|gb|EEF48340.1| chlorophyll synthase, putative [Ricinus communis]
Length = 535
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/534 (85%), Positives = 496/534 (92%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M +ATAAALSLPISL R +K N+KK VRGGF VFA+FGEEGG++DKKS WSTLFDVEDP
Sbjct: 1 MNTVATAAALSLPISLCRSSKHNSKKGVRGGFGVFAVFGEEGGVLDKKSVWSTLFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK+PQ KGKFLDVNQALEVAR+DIQYCDWRARQDVLTIMLLHEKVV+VLNPLARDYKSI
Sbjct: 61 RSKMPQLKGKFLDVNQALEVARFDIQYCDWRARQDVLTIMLLHEKVVDVLNPLARDYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELA LQE LAQAH+QVH+SEARV+TALDKLAYMEALVNDRLL DR T+ T T
Sbjct: 121 GTVKKELAGLQEALAQAHQQVHLSEARVSTALDKLAYMEALVNDRLLPDRSTTETSHTSP 180
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
S ST+ QSLD V+ + PRKSLNVSGPVQPY++ LKNFW+PVAFSTDLKDDTM+P DCFEE
Sbjct: 181 STSTAPQSLDTVQRRSPRKSLNVSGPVQPYHSHLKNFWYPVAFSTDLKDDTMIPIDCFEE 240
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPST+L
Sbjct: 241 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLL 300
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKSLPCFEQEGMIW+WPG +PP AT+P L PP+GF +HAEIVMELP+EHGLLLDNLL
Sbjct: 301 NVKIKSLPCFEQEGMIWVWPGSDPPAATLPSLQPPAGFHVHAEIVMELPVEHGLLLDNLL 360
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGW+VPSLV FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 361 DLAHAPFTHTSTFAKGWTVPSLVTFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEG++TRQCATHLHQLHVCLPSSR+KTRLLYRMSLDFA +LKH+PFM+YLWRHFAEQV
Sbjct: 421 GKLEGKSTRQCATHLHQLHVCLPSSRQKTRLLYRMSLDFAPLLKHIPFMEYLWRHFAEQV 480
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 534
LNEDLRLV+GQQERM NGANVWNLPV YDKLGVRYRLWRDA+E+GAKQ PF KP
Sbjct: 481 LNEDLRLVVGQQERMINGANVWNLPVTYDKLGVRYRLWRDAVERGAKQNPFSKP 534
>gi|224082298|ref|XP_002306638.1| predicted protein [Populus trichocarpa]
gi|222856087|gb|EEE93634.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/531 (85%), Positives = 489/531 (92%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
MTA ATAAALS+PISL R +K+N KK VRGGFRVFA+ GEEGGL+DKKS W LFDVEDP
Sbjct: 1 MTAFATAAALSVPISLCRSSKLNCKKGVRGGFRVFAVLGEEGGLLDKKSTWGPLFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK+PQ KGKFLD QALEVARYDIQYCDWRARQD+LTIM+LHEKVVEVLNPLARDYKSI
Sbjct: 61 RSKMPQFKGKFLDAYQALEVARYDIQYCDWRARQDLLTIMILHEKVVEVLNPLARDYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELAELQ++L+QAHRQVHISEARV+TALDKLAYME LVNDRLLQDR+ + +DQ
Sbjct: 121 GTMKKELAELQDELSQAHRQVHISEARVSTALDKLAYMEELVNDRLLQDRNPAESDQASP 180
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
SPSTS QSLD VK K PRK+L VSGPVQPY+ LKNFW+PVAFSTDLKD TM+P DCFEE
Sbjct: 181 SPSTSTQSLDTVKNKSPRKNLKVSGPVQPYHPHLKNFWYPVAFSTDLKDGTMIPIDCFEE 240
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWV+FRG DG PGCV+NTCAHRACPLHLGSVNEGR++CPYHGWEYSTDGKCEKMPST+L
Sbjct: 241 PWVLFRGMDGKPGCVRNTCAHRACPLHLGSVNEGRVRCPYHGWEYSTDGKCEKMPSTRLL 300
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKSLPCFEQEGMI +WPG +PP AT+P L PP GF++HAEIVMELP+EHGLLLDNLL
Sbjct: 301 NVKIKSLPCFEQEGMILVWPGSDPPAATLPSLQPPPGFQVHAEIVMELPVEHGLLLDNLL 360
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEGQ+TR+CATHLHQLHVCLPSSR KTRLLYRMSLDFA VLKHVPFM YLWRHFAEQV
Sbjct: 421 GKLEGQSTRECATHLHQLHVCLPSSRHKTRLLYRMSLDFAPVLKHVPFMHYLWRHFAEQV 480
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
LNEDLRLVLGQQERM NGANVWN PV YDKLGVRYRLWRDA+EKGAKQLPF
Sbjct: 481 LNEDLRLVLGQQERMINGANVWNWPVSYDKLGVRYRLWRDAVEKGAKQLPF 531
>gi|449465447|ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
gi|449513335|ref|XP_004164299.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 534
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/531 (82%), Positives = 489/531 (92%), Gaps = 1/531 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
MT +ATAAALSLPIS + ++N KKSV+GGFRVFA+FGEEG +++KS W TLFDVEDP
Sbjct: 1 MTVVATAAALSLPISFSKSPRLNFKKSVKGGFRVFAVFGEEGA-IERKSGWETLFDVEDP 59
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
R+KVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVL IMLLHEKVVEVLNPLARDYKSI
Sbjct: 60 RTKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLAIMLLHEKVVEVLNPLARDYKSI 119
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELA LQ++LA+AHRQVHISEARVATALDKLAYME LV+DRLLQDR+T+ D
Sbjct: 120 GTMKKELAGLQDELAEAHRQVHISEARVATALDKLAYMEELVHDRLLQDRNTAELDSPST 179
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
P TS Q LD + P+KSLNVSGPV+PY+ RLKNFW+PVAFS+DLK+D M+PFDCFEE
Sbjct: 180 LPGTSTQPLDSINRSSPKKSLNVSGPVEPYHPRLKNFWYPVAFSSDLKNDIMIPFDCFEE 239
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWV+FRGKDG PGC++NTCAHRACPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPST+L
Sbjct: 240 PWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLL 299
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKSLPCFE+EGMIW+WPG++PP A +P L PP GF+IHAE+V+E+P+EHGLLLDNLL
Sbjct: 300 NVKIKSLPCFEKEGMIWVWPGNDPPAANLPSLKPPPGFQIHAELVIEIPVEHGLLLDNLL 359
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 360 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 419
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEGQ+TR+C+THLHQLHVCLPS+R+KTRLLYRMSLDFA VLK +PFM YLWRHFAEQV
Sbjct: 420 GKLEGQSTRECSTHLHQLHVCLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQV 479
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
LNEDLRLV+GQQERM NGAN+WN+PV YDKLGVRYRLWR+A+E+GAKQLPF
Sbjct: 480 LNEDLRLVIGQQERMVNGANIWNMPVSYDKLGVRYRLWRNAVEEGAKQLPF 530
>gi|359492578|ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Vitis
vinifera]
gi|302141810|emb|CBI19013.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/535 (84%), Positives = 492/535 (91%), Gaps = 2/535 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
MT +ATAAALSLP+SL +KINTKK R G RVFA+FG+E G V++KS W T+FDVEDP
Sbjct: 1 MTIVATAAALSLPLSLCPTSKINTKKGERRGLRVFAVFGDESGSVERKSTWGTIFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK PQ KGKFLDVNQALEVAR+DIQYCDWRARQD+LTIMLLHEKVVEVLNPLAR+YKSI
Sbjct: 61 RSKFPQSKGKFLDVNQALEVARFDIQYCDWRARQDLLTIMLLHEKVVEVLNPLAREYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KK+LA LQE+LAQAHRQVHISEARV TALDKLAYME LVNDRLLQDR+T+ ++QT
Sbjct: 121 GTLKKDLAGLQEELAQAHRQVHISEARVGTALDKLAYMEELVNDRLLQDRNTADSNQTST 180
Query: 181 SPSTSKQ--SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCF 238
S S S SLD+VK KLP+KSLNVSGPVQPY+ RLKNFW+PVAFSTDLKDDTM+P DCF
Sbjct: 181 STSPSTSTASLDMVKRKLPQKSLNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMIPIDCF 240
Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 298
EEPWV+FRG+DG PGCV+NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST+
Sbjct: 241 EEPWVVFRGQDGKPGCVRNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTR 300
Query: 299 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 358
L NVKIKSLPC EQEGMIWIWPG +PPTAT+P L PP GF+IHAEIVMELP+EHGLLLDN
Sbjct: 301 LLNVKIKSLPCLEQEGMIWIWPGSDPPTATLPSLQPPPGFKIHAEIVMELPVEHGLLLDN 360
Query: 359 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS
Sbjct: 361 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 420
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
KPGKLEGQ+T+QCATHLHQLHVCLPSSR KTRLLYRMSLDFA VL+H+PFMQYLWR+FAE
Sbjct: 421 KPGKLEGQSTKQCATHLHQLHVCLPSSRDKTRLLYRMSLDFAPVLQHIPFMQYLWRYFAE 480
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
+VLNEDLRLVLGQQ+RM GANVWN PV YDKLGVRYRLWRDA+E+GAK+LPF +
Sbjct: 481 KVLNEDLRLVLGQQDRMLMGANVWNCPVSYDKLGVRYRLWRDAVERGAKRLPFTE 535
>gi|356509409|ref|XP_003523442.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/533 (84%), Positives = 493/533 (92%), Gaps = 3/533 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATAA LSLP S + +K++TKK ++G FRVFA++GEE +DKK+AWS LFDVEDP
Sbjct: 1 MNAIATAAVLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEE---IDKKNAWSALFDVEDP 57
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSKVPQ KGKFLDV QALEVARYDIQYCDWRARQD+LTIMLLHEKVVEVLNPLARDYKSI
Sbjct: 58 RSKVPQYKGKFLDVYQALEVARYDIQYCDWRARQDLLTIMLLHEKVVEVLNPLARDYKSI 117
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELAELQE+LAQAH+QVHISEARV++ALDKLAYME LVND+LLQ+R T+ QT +
Sbjct: 118 GTMKKELAELQEELAQAHQQVHISEARVSSALDKLAYMEELVNDKLLQERSTTEVSQTSS 177
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
SPSTS + +DI K + PRKSL++SGPVQ Y+ LKNFW+PVAFSTDLKDDTM+P +CFEE
Sbjct: 178 SPSTSFKPVDIEKRRSPRKSLDISGPVQSYHPHLKNFWYPVAFSTDLKDDTMIPIECFEE 237
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPST+L
Sbjct: 238 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLL 297
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKSLPCFE EGMIW+WPG++PPTAT+P LLPPSGFE+HAEIVMELPIEHGLLLDNLL
Sbjct: 298 NVKIKSLPCFETEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLL 357
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 358 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 417
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEGQ+T QCATHLHQLHVCLPSS++KTRLLYRMSLDFA VLKH+PFMQ+LWR+FAEQV
Sbjct: 418 GKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQV 477
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
LNEDLRLVLGQQERMNNGANVWN PV YDKLG+RYRLWR+ALE+G KQ PF K
Sbjct: 478 LNEDLRLVLGQQERMNNGANVWNFPVSYDKLGIRYRLWRNALERGNKQPPFSK 530
>gi|356515896|ref|XP_003526633.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/533 (83%), Positives = 489/533 (91%), Gaps = 3/533 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATAA LSLP S + +K++TKK ++G FRVFA++GEE +DKKS WS LFDVEDP
Sbjct: 1 MNAIATAALLSLPFSFSKSSKLDTKKGLKGRFRVFAVYGEE---IDKKSTWSALFDVEDP 57
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSKVPQ KGKFLDV QALE ARYDIQYCDWRARQD+L IMLLHEKVVEVLNPLARDYKSI
Sbjct: 58 RSKVPQYKGKFLDVYQALEFARYDIQYCDWRARQDLLAIMLLHEKVVEVLNPLARDYKSI 117
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKKELA LQE+LA AH+QVHISEARV+TALDKLAYME LVND+LLQ+R T+ QT +
Sbjct: 118 GTMKKELAGLQEELALAHQQVHISEARVSTALDKLAYMEELVNDKLLQERTTTEVSQTSS 177
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
SPSTS + +D+ K + PRKSL++SGPVQ Y+T LKNFW+PVAFSTDLKDDTM+P +CFEE
Sbjct: 178 SPSTSFKPVDVEKRRPPRKSLDISGPVQSYHTHLKNFWYPVAFSTDLKDDTMIPIECFEE 237
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWVIFRGKDG PGCVQNTCAHRACPLHLGSV EGRIQCPYHGWEY+TDGKCEKMPST+L
Sbjct: 238 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYTTDGKCEKMPSTRLL 297
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKSLPCFE+EGMIW+WPG++PPTAT+P LLPPSGFE+HAEIVMELPIEHGLLLDNLL
Sbjct: 298 NVKIKSLPCFEKEGMIWVWPGNDPPTATLPSLLPPSGFEVHAEIVMELPIEHGLLLDNLL 357
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 358 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 417
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEGQ+T QCATHLHQLHVCLPSS++KTRLLYRMSLDFA VLKH+PFMQ+LWR+FAEQV
Sbjct: 418 GKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFMQHLWRYFAEQV 477
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
LNEDLRLVLGQQERMNNGANVWN PV YDKLGVRYRLWR+ALE+G KQ PF K
Sbjct: 478 LNEDLRLVLGQQERMNNGANVWNFPVSYDKLGVRYRLWRNALEQGTKQPPFSK 530
>gi|356552681|ref|XP_003544691.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 534
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/531 (83%), Positives = 484/531 (91%), Gaps = 5/531 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATA+AL+LPI L R K++TK+ ++G FRVFA+FGEE +KK+AW+ LFDVEDP
Sbjct: 1 MNAIATASALTLPIFL-RAGKLDTKRDLKGRFRVFAVFGEE----EKKNAWAALFDVEDP 55
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK PQ KGK LD+ QALEVAR+DIQY DWRARQDVLTIM LHEKVVEVLNPLAR+YKSI
Sbjct: 56 RSKFPQNKGKVLDIYQALEVARHDIQYLDWRARQDVLTIMHLHEKVVEVLNPLAREYKSI 115
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELA LQ++LAQAHRQVHISEARV TALDKLAYME LVNDRLLQDR T+ QT +
Sbjct: 116 GTLKKELAGLQDELAQAHRQVHISEARVTTALDKLAYMEELVNDRLLQDRSTAEVAQTSS 175
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
SPSTS SL I K + PRKSLNVSGPVQ Y+ LKNFW+PVAFS DLKDDTM+P +CFEE
Sbjct: 176 SPSTSANSLVIEKRRQPRKSLNVSGPVQSYHPHLKNFWYPVAFSNDLKDDTMIPIECFEE 235
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPSTQ
Sbjct: 236 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTQQL 295
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKS+PCFE+EGMIWIWPG++PPTAT+P LLPPSGFEIHAEIVMELPIEHGLLLDNLL
Sbjct: 296 NVKIKSVPCFEREGMIWIWPGNDPPTATLPSLLPPSGFEIHAEIVMELPIEHGLLLDNLL 355
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLV FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 356 DLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 415
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G+LEGQ+TR+C+THLHQLHVCLPSS++KTRLLYRMSLDFA +LKH+P M+YLWRHFAEQV
Sbjct: 416 GRLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMKYLWRHFAEQV 475
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
LNEDLRLV+GQQERMNNGANVWN PV YDKLGVRYR+WRDALE+G KQLPF
Sbjct: 476 LNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRMWRDALERGVKQLPF 526
>gi|356549331|ref|XP_003543047.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 898 bits (2320), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/531 (83%), Positives = 483/531 (90%), Gaps = 5/531 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATA+ALSLPI L R K++TK+ ++G FRVFA+FGEE +KK+AW LFDVEDP
Sbjct: 1 MNAIATASALSLPIFL-RAGKLDTKRDLKGRFRVFAVFGEE----EKKNAWGALFDVEDP 55
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK PQ KGK LD++QALEVAR+DIQY DWRARQDVLTIM LHEKVVEVLNPLAR+YKSI
Sbjct: 56 RSKFPQNKGKVLDISQALEVARHDIQYLDWRARQDVLTIMHLHEKVVEVLNPLAREYKSI 115
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELAELQ++LAQAH QVHISEARV TALDKLAYME LVNDRLLQDR T+ QT +
Sbjct: 116 GTLKKELAELQDELAQAHTQVHISEARVTTALDKLAYMEELVNDRLLQDRSTTDVAQTSS 175
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
SPSTS SL K + PRKSLNVSGPVQ Y+ LKNFW+PVAFS DLKDDTM+P +CFEE
Sbjct: 176 SPSTSANSLVTEKRRQPRKSLNVSGPVQSYHPHLKNFWYPVAFSNDLKDDTMIPIECFEE 235
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY+TDGKCEKMPST+
Sbjct: 236 PWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRQL 295
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKS+PCFE+EGMIWIWPG++PP AT+P +LPPSGFEIHAEIVMELPIEHGLLLDNLL
Sbjct: 296 NVKIKSVPCFEKEGMIWIWPGNDPPAATLPSILPPSGFEIHAEIVMELPIEHGLLLDNLL 355
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLV FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP
Sbjct: 356 DLAHAPFTHTSTFAKGWSVPSLVNFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 415
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEGQ+TR+C+THLHQLHVCLPSS++KTRLLYRMSLDFA +LKH+P M+YLWRHFAEQV
Sbjct: 416 GKLEGQSTRECSTHLHQLHVCLPSSKQKTRLLYRMSLDFAPLLKHIPLMKYLWRHFAEQV 475
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
LNEDLRLV+GQQERMNNGANVWN PV YDKLGVRYR+WRDALE+GAKQLPF
Sbjct: 476 LNEDLRLVVGQQERMNNGANVWNFPVAYDKLGVRYRMWRDALERGAKQLPF 526
>gi|312282087|dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]
Length = 534
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/531 (78%), Positives = 476/531 (89%), Gaps = 4/531 (0%)
Query: 3 AIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
A+ T++ALSLPIS R +K++ KK V+G FRVFA+FGEEGGLV+KKS W LFDVEDP
Sbjct: 4 AVFTSSALSLPISFCKTRSSKLSRKKGVKGEFRVFAVFGEEGGLVEKKSQWGPLFDVEDP 63
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK P KGKFLDVNQALEVAR+DIQY DWRARQD+LTIMLLHEKVV+VLNPLAR+YKSI
Sbjct: 64 RSKTPPFKGKFLDVNQALEVARFDIQYLDWRARQDLLTIMLLHEKVVDVLNPLAREYKSI 123
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GT+KKELAELQE+L +AH+QVHISEARV+TALDKLA+ME LVNDRLL R + TD+
Sbjct: 124 GTVKKELAELQEELGKAHQQVHISEARVSTALDKLAHMEKLVNDRLLPVRVATETDK--P 181
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEE 240
S STS Q LD K + K+LNVSGPVQPY+ +LKNFW+PVAF+ DLK DTMVP DCFE+
Sbjct: 182 STSTSVQDLDKEKTNVGAKTLNVSGPVQPYSQQLKNFWYPVAFTADLKHDTMVPIDCFEQ 241
Query: 241 PWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR 300
PWVIFRG+DG PGCV+NTCAHRACPL LG+V EGRIQCPYHGWEYSTDGKC KMPST+L
Sbjct: 242 PWVIFRGEDGKPGCVRNTCAHRACPLDLGTVKEGRIQCPYHGWEYSTDGKCTKMPSTKLL 301
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
NVKIKS+PC EQ+GMIW+WPGD+PP+ T+P L PPSGF IHAE+VM+LP+EHGLLLDNLL
Sbjct: 302 NVKIKSIPCLEQDGMIWVWPGDDPPSPTLPSLQPPSGFVIHAELVMDLPVEHGLLLDNLL 361
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
DLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEF+PPC+VLSTIGISKP
Sbjct: 362 DLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFKPPCIVLSTIGISKP 421
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GKLEG++T+QCATHLHQLHVCLPSSR KTRLLYRMSLDFA +LK+VPFM++LWRHFAEQV
Sbjct: 422 GKLEGKSTKQCATHLHQLHVCLPSSRNKTRLLYRMSLDFAPILKNVPFMEHLWRHFAEQV 481
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
LNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 482 LNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 532
>gi|297852214|ref|XP_002893988.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
gi|297339830|gb|EFH70247.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/532 (76%), Positives = 469/532 (88%), Gaps = 2/532 (0%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ +A+ALSLPIS R + ++ KK V+G FR+FA+FG+E GL++KKS W LFDVED
Sbjct: 3 AAVFSASALSLPISFSKTRSSYLSRKKGVKGEFRIFAVFGDESGLLEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVAELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 TSATASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
VKIKSLPC EQEGMIWIWPGDEPP T+PCL PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPTLPCLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTKQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|15219408|ref|NP_175088.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|75264959|sp|Q9MBA1.1|CAO_ARATH RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Short=AtCAO; Flags: Precursor
gi|13876511|gb|AAK43487.1|AC084807_12 chlorophyll a oxygenase [Arabidopsis thaliana]
gi|6855279|dbj|BAA90462.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|22135956|gb|AAM91560.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|25083487|gb|AAN72086.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|110737210|dbj|BAF00553.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|332193913|gb|AEE32034.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/532 (76%), Positives = 466/532 (87%), Gaps = 2/532 (0%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|115483526|ref|NP_001065433.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|75247969|sp|Q8S7E1.1|CAO_ORYSJ RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|18855011|gb|AAL79703.1|AC087599_22 putative chlorophyll synthase [Oryza sativa Japonica Group]
gi|110289596|gb|ABB48002.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639965|dbj|BAF27270.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|215694378|dbj|BAG89371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185043|gb|EEC67470.1| hypothetical protein OsI_34701 [Oryza sativa Indica Group]
gi|222613297|gb|EEE51429.1| hypothetical protein OsJ_32509 [Oryza sativa Japonica Group]
Length = 541
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/534 (76%), Positives = 464/534 (86%), Gaps = 7/534 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ + ++K V GG +V+A+ G++G K +AW LF V+D
Sbjct: 1 MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180
Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC 237
S PSTS S +V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTMVP DC
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239
Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
FEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299
Query: 298 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 357
++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359
Query: 358 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
E+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 480 EKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 533
>gi|110289597|gb|ABB48003.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 526
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/504 (79%), Positives = 447/504 (88%), Gaps = 3/504 (0%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ G++G K +AW LF V+DP +VP KGKFLDVNQALEV R+DIQYCD
Sbjct: 16 GGIKVYAVLGDDGADYAKNNAWEALFHVDDPGPRVPIAKGKFLDVNQALEVVRFDIQYCD 75
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIM+LH KVVEVLNPLAR++KSIGT++KELAELQE+LA+AH QVH+SE RV+
Sbjct: 76 WRARQDLLTIMVLHNKVVEVLNPLAREFKSIGTLRKELAELQEELAKAHNQVHLSETRVS 135
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGTDQTCAS--PSTSKQSLDIVKGKLPRKSLNVSGPV 207
+ALDKLA ME LVNDRLLQD +S + C S PSTS S +V K PR+SLNVSGPV
Sbjct: 136 SALDKLAQMETLVNDRLLQDGGSSASTAECTSLAPSTSSAS-RVVNKKPPRRSLNVSGPV 194
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 267
QPYN LKNFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG PGCV NTCAHRACPLH
Sbjct: 195 QPYNPSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLH 254
Query: 268 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
LGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCFEQEGM+WIWPG++PP +
Sbjct: 255 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKS 314
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
TIP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT
Sbjct: 315 TIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 374
Query: 388 PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRK 447
P+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR
Sbjct: 375 PSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHICLPSSRN 434
Query: 448 KTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 507
KTRLLYRMSLDFA +KHVPFM LW HFAE+VLNEDLRLVLGQQERM NGANVWN PV
Sbjct: 435 KTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERMINGANVWNWPVS 494
Query: 508 YDKLGVRYRLWRDALEKGAKQLPF 531
YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 495 YDKLGIRYRLWRDAIERGVDRLPF 518
>gi|5853117|gb|AAD54323.1| chlorophyll a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/532 (76%), Positives = 465/532 (87%), Gaps = 2/532 (0%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLN LAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNRLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|224066823|ref|XP_002302233.1| predicted protein [Populus trichocarpa]
gi|222843959|gb|EEE81506.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/470 (87%), Positives = 439/470 (93%)
Query: 64 VPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTM 123
+PQ KGKFLD QALEVARYDIQYCDWRARQD+LTIM+LHEKVVEVLNPLARDYK IGTM
Sbjct: 1 MPQFKGKFLDFYQALEVARYDIQYCDWRARQDLLTIMILHEKVVEVLNPLARDYKCIGTM 60
Query: 124 KKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPS 183
KKELAELQ++LAQAHRQVHISEARVATALDKLAYME LVNDRLLQDR+ + DQ SPS
Sbjct: 61 KKELAELQDELAQAHRQVHISEARVATALDKLAYMEELVNDRLLQDRNQAEPDQESPSPS 120
Query: 184 TSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWV 243
TS QSLD VK K PRK+LNVSGPVQPY+ RLKNFW+PVAFSTDLKDDTM+P DCFEEPWV
Sbjct: 121 TSTQSLDTVKRKSPRKNLNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMIPIDCFEEPWV 180
Query: 244 IFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK 303
+FRGKDG PGCV+NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST+L +VK
Sbjct: 181 LFRGKDGKPGCVRNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTRLLDVK 240
Query: 304 IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA 363
+KSLPCFEQEGMIWIWPG +PP A++P L PP GF++HAEIVMELP+EHGLLLDNLLDLA
Sbjct: 241 VKSLPCFEQEGMIWIWPGSDPPAASLPSLQPPPGFQVHAEIVMELPVEHGLLLDNLLDLA 300
Query: 364 HAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 423
HAPFTHTSTFAKGW+VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL
Sbjct: 301 HAPFTHTSTFAKGWTVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 360
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 483
EGQ+TR+CATHLHQLHVCLPSSR+KTRLLYRMSLDFA VLKH PFM YLW+HFAEQVLNE
Sbjct: 361 EGQSTRECATHLHQLHVCLPSSRQKTRLLYRMSLDFAGVLKHFPFMHYLWKHFAEQVLNE 420
Query: 484 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
DLRLVLGQQERM NGANVWN PV YDKLGVRYRLWRDA+E+GAKQLPF K
Sbjct: 421 DLRLVLGQQERMINGANVWNWPVSYDKLGVRYRLWRDAVERGAKQLPFRK 470
>gi|5478807|dbj|BAA82484.1| chlorophyll b synthase [Arabidopsis thaliana]
Length = 536
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/532 (75%), Positives = 464/532 (87%), Gaps = 2/532 (0%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGKLEG++T+QCATH HQLHVCLPSS+ KTRLL RMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHFHQLHVCLPSSKNKTRLLCRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
VLNEDLRLVLGQQERM NGAN+WNLPV YDKLGVRYRLWR+A+++G +LPF
Sbjct: 483 VLNEDLRLVLGQQERMLNGANIWNLPVAYDKLGVRYRLWRNAVDRGDDKLPF 534
>gi|338173749|gb|AEI83421.1| chlorophyllide a oxygenase [Camellia sinensis]
Length = 536
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/535 (77%), Positives = 459/535 (85%), Gaps = 3/535 (0%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M+AIAT A +SLPISL R +K + K+ VR GF VFA+FGEEGGL DKKSAWSTLFDVEDP
Sbjct: 1 MSAIATVATISLPISLSRSSKFSNKRGVRAGFGVFAVFGEEGGLEDKKSAWSTLFDVEDP 60
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSKVPQCKGKFLDVNQALE+ R+DIQYCDWRARQD+LTIMLLHEKVVEVLNPLARDYKSI
Sbjct: 61 RSKVPQCKGKFLDVNQALELVRFDIQYCDWRARQDLLTIMLLHEKVVEVLNPLARDYKSI 120
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC- 179
GT+KK+LAELQ++LAQAH+QVHISEARV+TALDKLAYME LV+DRLLQD+ T+ T+ C
Sbjct: 121 GTLKKDLAELQDELAQAHKQVHISEARVSTALDKLAYMEELVHDRLLQDKPTT-TESECM 179
Query: 180 -ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCF 238
S STS +SLD V+ KL RK LNVSGPVQPY+ RLKNFW+PVAFSTDLKDDTMVP DCF
Sbjct: 180 SPSSSTSTESLDTVRNKLSRKILNVSGPVQPYHPRLKNFWYPVAFSTDLKDDTMVPIDCF 239
Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 298
EEPWVIFRGKDG PGCVQNTCAHRACPLHLG +NEGRIQCPYHGWEYSTDGKC+KMPST+
Sbjct: 240 EEPWVIFRGKDGKPGCVQNTCAHRACPLHLGPINEGRIQCPYHGWEYSTDGKCKKMPSTR 299
Query: 299 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 358
L N KIK+LPCFEQEGMIWIWPG++ PTATIP L PP GF+IHAEIVMELP+EHGLLLDN
Sbjct: 300 LVNAKIKALPCFEQEGMIWIWPGNDAPTATIPSLQPPPGFKIHAEIVMELPVEHGLLLDN 359
Query: 359 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
LLDLAHAPFTHTSTFAKGWSVPSL KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS
Sbjct: 360 LLDLAHAPFTHTSTFAKGWSVPSLAKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 419
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
PG + + ++ +LKHVPFMQYLW++FAE
Sbjct: 420 SPGNWKDRALSSALRIFTNFMYAYHHLDRRQGYCTECRWILLPMLKHVPFMQYLWKYFAE 479
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
+VLNEDLR+V+GQQ+RM NGANVWNLPV YDKLGVRYRLWRDA+++GAKQLPF K
Sbjct: 480 KVLNEDLRIVIGQQDRMLNGANVWNLPVSYDKLGVRYRLWRDAVDQGAKQLPFSK 534
>gi|242059995|ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
gi|241931118|gb|EES04263.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
Length = 542
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/535 (75%), Positives = 458/535 (85%), Gaps = 8/535 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T ++LSL P L +P+ ++K V GG +V+A+ E+G K + LF V+D
Sbjct: 1 MNTVSSLSLVPHLLIKPSIACFSRKGVGRYGGIKVYAVLREDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P + P KGKFLDVN+ALEV R+DIQYCDWRARQD+LTIMLLH KVVEVLNPLAR++KS
Sbjct: 61 PGPRCPIKKGKFLDVNEALEVVRFDIQYCDWRARQDLLTIMLLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGT---D 176
IGT++KELAELQ++L +AH QVH+SEARV++ALDKLA+ME LVNDRLL SGT +
Sbjct: 121 IGTLRKELAELQQELEKAHNQVHLSEARVSSALDKLAHMETLVNDRLLPPDGASGTSTAE 180
Query: 177 QTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFD 236
T PSTS + + K PR+SLNVSGPV+PYN LKNFW+PVAFS+DLKDDTMVP D
Sbjct: 181 STSLVPSTSSTA-HVRAKKQPRRSLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPID 239
Query: 237 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 296
CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 297 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 356
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF IHAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTIHAEIVMELPVEHGLLL 359
Query: 357 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
AE+VLNEDLRLVLGQQERM NGAN+WN PV YDKLG+RYRLWRDA+E+G+ +LPF
Sbjct: 480 AEKVLNEDLRLVLGQQERMINGANIWNWPVSYDKLGIRYRLWRDAVERGSDRLPF 534
>gi|226490898|ref|NP_001151343.1| LOC100284976 [Zea mays]
gi|195645962|gb|ACG42449.1| chlorophyllide a oxygenase [Zea mays]
gi|223948119|gb|ACN28143.1| unknown [Zea mays]
gi|413951238|gb|AFW83887.1| chlorophyllide a oxygenase [Zea mays]
Length = 542
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/535 (74%), Positives = 453/535 (84%), Gaps = 8/535 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFD 236
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTMVP
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 237 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 296
CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 297 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 356
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLL 359
Query: 357 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
AE+VLNEDLRLVLGQQERM NGANVWN PV YDKLGVRYRLWRD +E+G+++LPF
Sbjct: 480 AEKVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGVRYRLWRDTVERGSERLPF 534
>gi|9944967|gb|AAG03051.1|AF284781_1 LLS1 protein [Oryza sativa Japonica Group]
Length = 540
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/534 (74%), Positives = 452/534 (84%), Gaps = 8/534 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ + ++K V GG +V+A+ G++G K +AW LF V+D
Sbjct: 1 MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180
Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC 237
S PSTS S +V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTMVP DC
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239
Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
FEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299
Query: 298 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 357
++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359
Query: 358 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
E+VLNEDLR+VLGQQ+ L KLG+RYRLWRDA+E+G +LPF
Sbjct: 480 EKVLNEDLRVVLGQQDGC-QWRKCLELASIICKLGIRYRLWRDAIERGVDRLPF 532
>gi|83317156|gb|ABC02752.1| chlorophyll synthase [Phyllostachys edulis]
Length = 541
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/539 (70%), Positives = 446/539 (82%), Gaps = 5/539 (0%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ ++K V GG +V+A+ ++ K + W LF V+D
Sbjct: 1 MTTVASLSLVPHLLIKPSFGCFSRKGVGRDGGIKVYAVLRDDKAEYSKNNNWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
+ T++KELAELQ++L +AH QVH+SEARV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 VETLRKELAELQQELTKAHNQVHLSEARVSSALDKLAQMETLVNDRLLQDGSSSASTAEC 180
Query: 180 ASPSTSKQSLDIVKGK-LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCF 238
S + S S K PR+++NVSGPV+PYN +L+NFW+PVAFS+DLKDDTMVP DCF
Sbjct: 181 TSLTPSTSSTTHAGAKKQPRRNINVSGPVKPYNPKLQNFWYPVAFSSDLKDDTMVPIDCF 240
Query: 239 EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ 298
EE WVIFRGKDG PGCVQNTCAHRACPLHLGSVN GRIQCPYHGWEYSTDGKCEKMPST+
Sbjct: 241 EEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNGGRIQCPYHGWEYSTDGKCEKMPSTK 300
Query: 299 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 358
+ NV+I+SLPCFEQEGM+WIWPGD+PP +TIP LLP SGF IHAEIVMELP+ HGLLLDN
Sbjct: 301 MLNVRIQSLPCFEQEGMVWIWPGDDPPKSTIPSLLPRSGFTIHAEIVMELPVRHGLLLDN 360
Query: 359 LLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
LLD AHAPFT T TFAKGWSVPSLV+FL P+ L GYWD + +EFRPPCMVLSTIGIS
Sbjct: 361 LLDTAHAPFTLTFTFAKGWSVPSLVEFLAPSPLLPGYWDLSQMIVEFRPPCMVLSTIGIS 420
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
KPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKH+PFM LW +FAE
Sbjct: 421 KPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHIPFMHLLWSYFAE 480
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQT 537
+VLNEDLRLVLGQQERM NGANVWN PV YDKLG+RYR WRDA+E+GA +LPF +++
Sbjct: 481 KVLNEDLRLVLGQQERMINGANVWNWPVSYDKLGIRYRQWRDAVERGADRLPFSNQIES 539
>gi|357126896|ref|XP_003565123.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 550
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/548 (70%), Positives = 454/548 (82%), Gaps = 14/548 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGG-LVDKKSAWSTLFDVE 58
+ T A+LSL P L +P+ + ++K V GG +V+A+ ++ + + W LF V+
Sbjct: 1 MNTVASLSLVPRLLIKPSFRCLSRKGVGRDGGIKVYAVLRDDSADYLKDNNQWEALFHVD 60
Query: 59 DPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK 118
DP +VP KG+FLD QAL+VAR+DIQYCDWRARQD+LTIM+LH KVVEVLNPLARD+K
Sbjct: 61 DPGPRVPIEKGQFLDAKQALDVARFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLARDFK 120
Query: 119 SIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
S+G ++K+LA LQE+LA+AH Q+++SE+RV++ALDKLA ME +VN+RLL D +
Sbjct: 121 SVGNLRKDLAGLQEELAKAHNQLYLSESRVSSALDKLAQMETVVNERLLSDGSAFASTAD 180
Query: 179 CAS--PSTS-------KQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD 229
CA+ PSTS + + K R+SLN+SGPV+PYN LKNFW+PVAFS+DLKD
Sbjct: 181 CATLDPSTSLDLDPSTSSTTHVGAKKAKRRSLNISGPVKPYNPNLKNFWYPVAFSSDLKD 240
Query: 230 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 289
DTMVP DCFEE WVIFRGKD PGCVQNTCAHRACPL LGSVNEGRI CPYHGWEYSTDG
Sbjct: 241 DTMVPIDCFEEQWVIFRGKDRRPGCVQNTCAHRACPLDLGSVNEGRITCPYHGWEYSTDG 300
Query: 290 KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP 349
KCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT TIP LLPPSGF IHAEIVMELP
Sbjct: 301 KCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSLLPPSGFTIHAEIVMELP 360
Query: 350 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPC 409
+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP SGLQGYWDPYPIDMEFRPPC
Sbjct: 361 VEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTPTSGLQGYWDPYPIDMEFRPPC 420
Query: 410 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 469
MVLSTIGISKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KH+PFM
Sbjct: 421 MVLSTIGISKPGKLEGKSTQQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHIPFM 480
Query: 470 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 529
LW HFAE+VLNEDLRLVLGQQERMN+GANVWN PV YDKLG+RYRLWRDA+E+G +L
Sbjct: 481 HLLWSHFAEKVLNEDLRLVLGQQERMNSGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 540
Query: 530 PFMKPMQT 537
PF +++
Sbjct: 541 PFSNQIES 548
>gi|115483520|ref|NP_001065430.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|78709025|gb|ABB48000.1| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639962|dbj|BAF27267.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|215693283|dbj|BAG88665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185041|gb|EEC67468.1| hypothetical protein OsI_34699 [Oryza sativa Indica Group]
gi|222613295|gb|EEE51427.1| hypothetical protein OsJ_32507 [Oryza sativa Japonica Group]
Length = 542
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/503 (73%), Positives = 421/503 (83%), Gaps = 1/503 (0%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
G +V+A+ G++ K + LF V++P P KG FLDVNQALEV R+ IQYCD
Sbjct: 32 GRIKVYAVLGDDEAQHAKNNMRGALFHVDNPGPMAPIAKGNFLDVNQALEVVRFGIQYCD 91
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIM+LH KVVEVL LA ++KS GT++KELAELQE+LA+AH QVH+SE R +
Sbjct: 92 WRARQDLLTIMVLHNKVVEVLKSLAIEFKSNGTLRKELAELQEELAKAHNQVHLSETRAS 151
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGT-DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQ 208
+ALDKLA + LVNDRLLQD +S + D + S + + V K R SL+VSGPVQ
Sbjct: 152 SALDKLAQADNLVNDRLLQDGGSSASIDNYVSLASRTSSASRFVNKKTLRPSLDVSGPVQ 211
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
PYN LKNFW+PV FS DLKDDTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHL
Sbjct: 212 PYNPNLKNFWYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHL 271
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
GSV+EGRIQCP+HGWEYSTDGKCEKMP+T+L NV+I+SLPCFEQEGM+WIWPGD P +T
Sbjct: 272 GSVSEGRIQCPFHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPGDGTPEST 331
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
IP L PPSGF IHAE+VMELP+EHGLLLDNLLD+AHAPF HTSTFAKGWSVPSLVKFLTP
Sbjct: 332 IPSLQPPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTSTFAKGWSVPSLVKFLTP 391
Query: 389 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 448
ASGLQGYWDPYPIDMEFRPPCMVLST GISKPGKLEG++ +QC+THLHQLH+CLPSSR K
Sbjct: 392 ASGLQGYWDPYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQLHICLPSSRNK 451
Query: 449 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 508
TR+LY+MSL+FA LKH+PFM LW HF E+VLNEDLRLVLGQQERM NGANVWN PV Y
Sbjct: 452 TRMLYQMSLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMINGANVWNWPVSY 511
Query: 509 DKLGVRYRLWRDALEKGAKQLPF 531
DKLG+RYRLWRDA+E+GA +LPF
Sbjct: 512 DKLGIRYRLWRDAIERGANRLPF 534
>gi|18854993|gb|AAL79685.1|AC087599_4 putative chlorophyll synthase [Oryza sativa Japonica Group]
Length = 519
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/503 (73%), Positives = 421/503 (83%), Gaps = 1/503 (0%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
G +V+A+ G++ K + LF V++P P KG FLDVNQALEV R+ IQYCD
Sbjct: 9 GRIKVYAVLGDDEAQHAKNNMRGALFHVDNPGPMAPIAKGNFLDVNQALEVVRFGIQYCD 68
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIM+LH KVVEVL LA ++KS GT++KELAELQE+LA+AH QVH+SE R +
Sbjct: 69 WRARQDLLTIMVLHNKVVEVLKSLAIEFKSNGTLRKELAELQEELAKAHNQVHLSETRAS 128
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGT-DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQ 208
+ALDKLA + LVNDRLLQD +S + D + S + + V K R SL+VSGPVQ
Sbjct: 129 SALDKLAQADNLVNDRLLQDGGSSASIDNYVSLASRTSSASRFVNKKTLRPSLDVSGPVQ 188
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
PYN LKNFW+PV FS DLKDDTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHL
Sbjct: 189 PYNPNLKNFWYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHL 248
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
GSV+EGRIQCP+HGWEYSTDGKCEKMP+T+L NV+I+SLPCFEQEGM+WIWPGD P +T
Sbjct: 249 GSVSEGRIQCPFHGWEYSTDGKCEKMPATKLLNVRIRSLPCFEQEGMVWIWPGDGTPEST 308
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
IP L PPSGF IHAE+VMELP+EHGLLLDNLLD+AHAPF HTSTFAKGWSVPSLVKFLTP
Sbjct: 309 IPSLQPPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTSTFAKGWSVPSLVKFLTP 368
Query: 389 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 448
ASGLQGYWDPYPIDMEFRPPCMVLST GISKPGKLEG++ +QC+THLHQLH+CLPSSR K
Sbjct: 369 ASGLQGYWDPYPIDMEFRPPCMVLSTTGISKPGKLEGKSIKQCSTHLHQLHICLPSSRNK 428
Query: 449 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 508
TR+LY+MSL+FA LKH+PFM LW HF E+VLNEDLRLVLGQQERM NGANVWN PV Y
Sbjct: 429 TRMLYQMSLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLGQQERMINGANVWNWPVSY 488
Query: 509 DKLGVRYRLWRDALEKGAKQLPF 531
DKLG+RYRLWRDA+E+GA +LPF
Sbjct: 489 DKLGIRYRLWRDAIERGANRLPF 511
>gi|385722324|gb|AFI73228.1| chlorophyllide a oxygenase [Hordeum vulgare]
gi|385722326|gb|AFI73229.1| chlorophyllide a oxygenase [Hordeum vulgare subsp. vulgare]
gi|385722328|gb|AFI73230.1| chlorophyllide a oxygenase [Hordeum vulgare]
Length = 550
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/548 (69%), Positives = 449/548 (81%), Gaps = 14/548 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGG-LVDKKSAWSTLFDVE 58
+ T A+LSL P L +P+ + ++K V GG +V+A+ ++ + W LF V+
Sbjct: 1 MTTVASLSLVPHLLIKPSFRCLSRKGVGRYGGIKVYAVLRDDSADYLKDNHHWEALFHVD 60
Query: 59 DPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK 118
DP +VP KG++L+ QAL+V R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLARD+K
Sbjct: 61 DPGPRVPIEKGQYLEAKQALDVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLARDFK 120
Query: 119 SIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
S+GT++K+L LQE+LA+AH Q+++SE+RV++ALDKLA ME +VN+RLL D
Sbjct: 121 SVGTLRKDLDGLQEELAKAHNQLYLSESRVSSALDKLAQMETVVNERLLSDGSAFANTAD 180
Query: 179 CAS---------PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD 229
CAS +++ ++ + K R+SLN+SGPV+PY+ LKNFW+PVAFS DLKD
Sbjct: 181 CASLDPSTSLDTTTSTSSTVRVGAKKPKRRSLNISGPVKPYSANLKNFWYPVAFSGDLKD 240
Query: 230 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 289
DTMVP DCFEE WVIFRGKD PGCVQNTCAHRACPL LGSVNEGRI CPYHGWEYSTDG
Sbjct: 241 DTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRITCPYHGWEYSTDG 300
Query: 290 KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP 349
KCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT TIP LLPPSGF IHAEIVMELP
Sbjct: 301 KCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSLLPPSGFTIHAEIVMELP 360
Query: 350 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPC 409
+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP SGLQGYWDPYPIDMEFRPPC
Sbjct: 361 VEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTPTSGLQGYWDPYPIDMEFRPPC 420
Query: 410 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 469
MVLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS KTRLLYRMSLDFA +KH+PFM
Sbjct: 421 MVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFM 480
Query: 470 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 529
LW HFAE+VLNEDLRLVLGQQ+RMNNGANVWN PV YDKLG+RYRLWRDA+E+G +L
Sbjct: 481 HLLWSHFAEKVLNEDLRLVLGQQDRMNNGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 540
Query: 530 PFMKPMQT 537
PF +++
Sbjct: 541 PFSNEIES 548
>gi|326500120|dbj|BAJ90895.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/548 (68%), Positives = 448/548 (81%), Gaps = 14/548 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGG-LVDKKSAWSTLFDVE 58
+ T A+LSL P L +P+ + ++K V GG +V+A+ ++ + W LF V+
Sbjct: 1 MTTVASLSLVPHLLIKPSFRCLSRKGVGRYGGIKVYAVLRDDSADYLKDNHHWEALFHVD 60
Query: 59 DPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYK 118
DP +VP KG++L+ QAL+V R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLARD+K
Sbjct: 61 DPGPRVPIEKGQYLEAKQALDVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLARDFK 120
Query: 119 SIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
S+GT++K+L LQE+LA+AH Q+++SE+RV++ALDKLA ME +VN+RLL D
Sbjct: 121 SVGTLRKDLDGLQEELAKAHNQLYLSESRVSSALDKLAQMETVVNERLLSDGSAFANTAD 180
Query: 179 CAS---------PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD 229
CAS +++ ++ + K R+SLN+SGPV+PY+ LKNFW+PVAFS DLKD
Sbjct: 181 CASLDPSTSLDTTTSTSSTVRVGAKKPKRRSLNISGPVKPYSANLKNFWYPVAFSGDLKD 240
Query: 230 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 289
DTMVP DCFEE WVIFRGKD PGCVQNTCAHRACPL LGSVNEGRI CPYHGWEYSTDG
Sbjct: 241 DTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRITCPYHGWEYSTDG 300
Query: 290 KCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP 349
KCEKMPST++ NV+I++LPCFEQEGM+WIWPGD+ PT TIP LLP SGF IHAEIVMELP
Sbjct: 301 KCEKMPSTKMLNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSLLPLSGFTIHAEIVMELP 360
Query: 350 IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPC 409
+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS VKFLTP SGLQGYWDPYPIDMEFRPPC
Sbjct: 361 VEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVKFLTPTSGLQGYWDPYPIDMEFRPPC 420
Query: 410 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 469
MVLSTIGISKPGKLEG++T+QCATHLHQLHVCLPSS KTRLLYRMSLDFA +KH+PFM
Sbjct: 421 MVLSTIGISKPGKLEGKSTQQCATHLHQLHVCLPSSTNKTRLLYRMSLDFAPWMKHMPFM 480
Query: 470 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 529
LW HFAE+VLNEDLRLVLGQQ+RMNNGANVWN PV YDKLG+RYRLWRDA+E+G +L
Sbjct: 481 HLLWSHFAEKVLNEDLRLVLGQQDRMNNGANVWNWPVSYDKLGIRYRLWRDAVERGVDRL 540
Query: 530 PFMKPMQT 537
PF +++
Sbjct: 541 PFSNEIES 548
>gi|414878608|tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 538
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/535 (72%), Positives = 448/535 (83%), Gaps = 13/535 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+L L P L +P+ ++K V GG +V+A+ E+G + + LF V+D
Sbjct: 1 MNTVASLPLAPRLLIKPSLACFSRKDVGRYGGIKVYAVLREDGAEFARNNNLEALFQVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P + P KFLDVN+ALEV R+DIQYCDWRARQD+LTIMLLH KVVEVLNPLAR++KS
Sbjct: 61 PGPRAPV--KKFLDVNEALEVVRFDIQYCDWRARQDLLTIMLLHSKVVEVLNPLAREFKS 118
Query: 120 IGTMKKELAELQEDLAQAH-RQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQT 178
IGT++KELAELQ++L +AH +QVH+SEARV++ALDKLA+ME LV+ + TS +
Sbjct: 119 IGTLRKELAELQQELEKAHNQQVHLSEARVSSALDKLAHMETLVSAPSTAEPPTSSSLSA 178
Query: 179 CASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDC 237
AS + ++ K K PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DC
Sbjct: 179 TASSTARVRA----KNKQPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDC 234
Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
FEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 235 FEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 294
Query: 298 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 357
++ +V+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLLD
Sbjct: 295 KMLDVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLLD 354
Query: 358 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 355 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 414
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
SKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HFA
Sbjct: 415 SKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHFA 474
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGA-KQLPF 531
E+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRLWRDA+E+GA +LPF
Sbjct: 475 EKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERGADDRLPF 529
>gi|42571757|ref|NP_973969.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193914|gb|AEE32035.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 511
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/481 (75%), Positives = 419/481 (87%), Gaps = 2/481 (0%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
LDLAHAPFTHTSTFAKGWSVPSLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISK
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPSLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISK 422
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGKLEG++T+QCATHLHQLHVCLPSS+ KTRLLYRMSLDFA +LK++PFM++LWRHFAEQ
Sbjct: 423 PGKLEGKSTQQCATHLHQLHVCLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQ 482
Query: 480 V 480
V
Sbjct: 483 V 483
>gi|110289598|gb|AAP55073.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 527
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/483 (76%), Positives = 418/483 (86%), Gaps = 7/483 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A+LSL P L +P+ + ++K V GG +V+A+ G++G K +AW LF V+D
Sbjct: 1 MTTVASLSLLPHLLIKPSFRCCSRKGVGRYGGIKVYAVLGDDGADYAKNNAWEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVNQALEV R+DIQYCDWRARQD+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIAKGKFLDVNQALEVVRFDIQYCDWRARQDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT++KELAELQE+LA+AH QVH+SE RV++ALDKLA ME LVNDRLLQD +S + C
Sbjct: 121 IGTLRKELAELQEELAKAHNQVHLSETRVSSALDKLAQMETLVNDRLLQDGGSSASTAEC 180
Query: 180 AS--PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC 237
S PSTS S +V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTMVP DC
Sbjct: 181 TSLAPSTSSAS-RVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDC 239
Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 297
FEE WVIFRGKDG PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST
Sbjct: 240 FEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST 299
Query: 298 QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 357
++ NV+I+SLPCFEQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLD
Sbjct: 300 KMLNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLD 359
Query: 358 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGI
Sbjct: 360 NLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGI 419
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
SKPGKLEG++T+QC+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFA
Sbjct: 420 SKPGKLEGKSTKQCSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFA 479
Query: 478 EQV 480
E+V
Sbjct: 480 EKV 482
>gi|413951240|gb|AFW83889.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 487
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/484 (73%), Positives = 405/484 (83%), Gaps = 8/484 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFD 236
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTMVP
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 237 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 296
CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 297 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 356
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLL 359
Query: 357 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 477 AEQV 480
AE+
Sbjct: 480 AEKA 483
>gi|413951239|gb|AFW83888.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 512
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/487 (73%), Positives = 406/487 (83%), Gaps = 8/487 (1%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFD 236
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTMVP
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 237 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 296
CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS 299
Query: 297 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLL 356
T++ NV+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EHGLLL
Sbjct: 300 TKMLNVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSGFTVHAEIVMELPVEHGLLL 359
Query: 357 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG
Sbjct: 360 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 419
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
ISKPGKLEG++T+QC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKHVP M LW HF
Sbjct: 420 ISKPGKLEGKSTQQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLLWSHF 479
Query: 477 AEQVLNE 483
AE+ E
Sbjct: 480 AEKACLE 486
>gi|226502977|ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea mays]
gi|194706992|gb|ACF87580.1| unknown [Zea mays]
Length = 440
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/435 (78%), Positives = 384/435 (88%), Gaps = 7/435 (1%)
Query: 100 MLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARVATALDKLAYM 158
MLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV++ALDKLA+M
Sbjct: 1 MLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARVSSALDKLAHM 60
Query: 159 EALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFW 218
E LV+ + TS + AS + ++ K K PR+ L+VSGPV+PYN LKNFW
Sbjct: 61 ETLVSAPSTAEPPTSSSLSATASSTARVRA----KNKQPRRRLDVSGPVKPYNPSLKNFW 116
Query: 219 FPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
+PVAFS+DLK DTMVP DCFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQ
Sbjct: 117 YPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 176
Query: 278 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSG 337
CPYHGWEYSTDGKCEKMPST++ +V+I+SLPCFEQEGM+WIWPGD+PP ATIP LLPPSG
Sbjct: 177 CPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCFEQEGMVWIWPGDDPPKATIPSLLPPSG 236
Query: 338 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 397
F +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD
Sbjct: 237 FTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 296
Query: 398 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 457
PYPIDMEFRPPCMVLSTIGISKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSL
Sbjct: 297 PYPIDMEFRPPCMVLSTIGISKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSL 356
Query: 458 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 517
DFA LKHVP M LW HFAE+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRL
Sbjct: 357 DFAPWLKHVPLMHLLWSHFAEKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRL 416
Query: 518 WRDALEKGA-KQLPF 531
WRDA+E+GA +LPF
Sbjct: 417 WRDAVERGADDRLPF 431
>gi|168057848|ref|XP_001780924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667637|gb|EDQ54262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/507 (61%), Positives = 380/507 (74%), Gaps = 16/507 (3%)
Query: 38 FGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVL 97
E D+++ +FDVEDPR K +DVN A E+ R D+ Y DW+ARQDVL
Sbjct: 1 MSESSSRKDQQAGIVRIFDVEDPRGASSSLKKGTIDVNTAWELLRQDVLYLDWKARQDVL 60
Query: 98 TIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAY 157
TI+ H+KVVEVLNPL RD KS+ T++ ELA LQE+L++AH QVH+SEARV L KL
Sbjct: 61 TIVHAHDKVVEVLNPLVRDVKSVETLRSELAGLQEELSKAHAQVHLSEARVEHTLRKLGE 120
Query: 158 MEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDIVKGKL-------PR------KSLNVS 204
ME+L N +LLQ++ G ++ P + + G+ PR KSL VS
Sbjct: 121 MESLFNTKLLQNQ---GRERGSTVPKATSALQLALTGEAEADLSARPRTNTSRAKSLEVS 177
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 264
GP+ PY +LKN+W+PVAFS D+ D TMVPF+ FEE WVIFRGKDG PGCV+++CAHRAC
Sbjct: 178 GPIGPYPAQLKNYWYPVAFSADIDDKTMVPFNSFEEAWVIFRGKDGRPGCVRDSCAHRAC 237
Query: 265 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEP 324
PL LG V EGRIQCPYHGWEY+T GKCEKMPST+ N K+ SLPC EQ+GM+WIWPG+E
Sbjct: 238 PLSLGKVEEGRIQCPYHGWEYNTSGKCEKMPSTRFVNAKLDSLPCIEQDGMVWIWPGNET 297
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P+ +PCL PPS + IHA+I MELP+EHGLL++NLLDLAHAPFTHT+TFAKGW VP+ VK
Sbjct: 298 PSTNLPCLNPPSHYTIHAQITMELPVEHGLLVENLLDLAHAPFTHTTTFAKGWDVPNFVK 357
Query: 385 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 444
F TP + LQG WDPYPI MEF+PPCMVLSTIG+ KPGKL G + C THLHQLHVC+PS
Sbjct: 358 FRTPIAALQGTWDPYPIAMEFKPPCMVLSTIGLEKPGKLNGSDVEACPTHLHQLHVCMPS 417
Query: 445 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL 504
S+ KTRLLYRM+LDFA LKHVPF++YLW+H A +VL EDLRLV GQQ+RM GANVWN+
Sbjct: 418 SKGKTRLLYRMALDFAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQQDRMERGANVWNV 477
Query: 505 PVGYDKLGVRYRLWRDALEKGAKQLPF 531
PV YDKLGVRYR WR A+E G +++PF
Sbjct: 478 PVAYDKLGVRYRRWRIAIESGDERIPF 504
>gi|168050551|ref|XP_001777722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670942|gb|EDQ57502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 562
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/489 (63%), Positives = 370/489 (75%), Gaps = 10/489 (2%)
Query: 54 LFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPL 113
F+VEDPR K DVN A E+ R D+ Y DW+AR+DVL I+ H+KVVEVLNPL
Sbjct: 72 FFNVEDPRGAGVSLKKGAFDVNTAWELLRQDVLYLDWKARRDVLAIVNAHDKVVEVLNPL 131
Query: 114 ARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTS 173
RD KS+ +++ ELA LQE+L++AH QVH+SEARV L KL ME+LVND+LLQ+ +
Sbjct: 132 VRDVKSVESLRSELAGLQEELSKAHAQVHLSEARVEHTLRKLGEMESLVNDKLLQNINPK 191
Query: 174 GTDQTCASPST------SKQSLDIV---KGKLPR-KSLNVSGPVQPYNTRLKNFWFPVAF 223
+ ST + DI +G R K L+VSGP+ PY +LKN W+P AF
Sbjct: 192 RGKTVPKAASTMEPVVMGEAEADISVRSRGSTSRGKPLDVSGPMGPYPAQLKNHWYPAAF 251
Query: 224 STDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGW 283
S D+ D TMVPFD FEE WVIFRGKDG PGCV+++CAHRACPL LG V +GRIQCPYHGW
Sbjct: 252 SADIDDKTMVPFDSFEEAWVIFRGKDGRPGCVRDSCAHRACPLSLGKVEDGRIQCPYHGW 311
Query: 284 EYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE 343
EY+T GKCEKMPST+L N ++ SLPC EQ+GM+WIWPG+E P+ +PCL PPS + IHA+
Sbjct: 312 EYNTSGKCEKMPSTRLVNAELDSLPCIEQDGMVWIWPGNETPSTNLPCLNPPSHYTIHAQ 371
Query: 344 IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM 403
I MELP+EHGLL++NLLDLAHAPFTHT+TFAKGW VPS VKF TP + L G WDPYPI M
Sbjct: 372 ITMELPVEHGLLVENLLDLAHAPFTHTTTFAKGWEVPSFVKFRTPIAALSGTWDPYPIAM 431
Query: 404 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 463
EF+PPCMVLSTIG+ KPGKL G + C THLHQLHVC+PSS+ KTRLLYRM+LDFA L
Sbjct: 432 EFKPPCMVLSTIGLEKPGKLNGTDVDACPTHLHQLHVCMPSSKGKTRLLYRMALDFAPYL 491
Query: 464 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 523
KHVPF++YLW+H A +VL EDLRLV GQQ+RM GANVWNLPV YDKLGVRYR WR LE
Sbjct: 492 KHVPFIKYLWQHLANKVLGEDLRLVEGQQDRMERGANVWNLPVAYDKLGVRYRRWRVDLE 551
Query: 524 KGAKQLPFM 532
G ++ PFM
Sbjct: 552 SGDEKTPFM 560
>gi|5478797|dbj|BAA82479.1| chlorophyll b synthase [Oryza sativa]
Length = 356
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/341 (85%), Positives = 317/341 (92%)
Query: 191 IVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG 250
+V K PR+SLNVSGPVQPYN LKNFW+PVAFS+DLKDDTMVP DCFEE WVIFRGKDG
Sbjct: 8 VVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDG 67
Query: 251 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF 310
PGCV NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++ NV+I+SLPCF
Sbjct: 68 RPGCVMNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCF 127
Query: 311 EQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
EQEGM+WIWPG++PP +TIP LLPPSGF IHAEIVMELP+EHGLLLDNLLDLAHAPFTHT
Sbjct: 128 EQEGMVWIWPGNDPPKSTIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHT 187
Query: 371 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 430
STFAKGWSVPSLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T+Q
Sbjct: 188 STFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQ 247
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 490
C+THLHQLH+CLPSSR KTRLLYRMSLDFA +KHVPFM LW HFAE+VLNEDLRLVLG
Sbjct: 248 CSTHLHQLHICLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLG 307
Query: 491 QQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
QQERM NGANVWN PV YDKLG+RYRLWRDA+E+G +LPF
Sbjct: 308 QQERMINGANVWNWPVSYDKLGIRYRLWRDAIERGVDRLPF 348
>gi|302817640|ref|XP_002990495.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
gi|300141663|gb|EFJ08372.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
Length = 491
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 287/455 (63%), Positives = 347/455 (76%), Gaps = 13/455 (2%)
Query: 69 GKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELA 128
+ +DVNQA E+ R+D+++ D RARQDVL I H+KVVEVLNPLAR+ KSI T+K+ELA
Sbjct: 17 SRVIDVNQAWELLRHDVEFLDLRARQDVLAIKDAHDKVVEVLNPLARETKSINTLKRELA 76
Query: 129 ELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQS 188
LQEDL +AH QVHISEARV L KLA ME +VND LLQ + T + A+ S SK
Sbjct: 77 NLQEDLQRAHAQVHISEARVNHTLSKLAEMETMVNDELLQKDEAAVTVRKNATSSKSK-- 134
Query: 189 LDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK 248
LN++GPV+ Y +KN+W+PVAFS L + + + FE+ WV+FRGK
Sbjct: 135 -----------GLNIAGPVKRYPAEMKNYWYPVAFSACLDSEKPLAIEIFEKNWVLFRGK 183
Query: 249 DGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLP 308
DG GC+ + CAHRACPL LG VN+G +QCPYHGWEY+T G CEKMPST+ K+KS+P
Sbjct: 184 DGRAGCIHDACAHRACPLSLGKVNDGCLQCPYHGWEYATSGSCEKMPSTRFVPTKVKSMP 243
Query: 309 CFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
C E++G++WIWPG P + IP LLPP F +HAEI+++L +EHGLL++NLLDLAHAPFT
Sbjct: 244 CIEKDGLVWIWPGSATPESDIPSLLPPENFTLHAEIILDLEVEHGLLMENLLDLAHAPFT 303
Query: 369 HTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
HT+TFAKGWSVPS VKF TP L+GYWDPYPIDMEFR PCMVLSTIG++KPGKLEG +T
Sbjct: 304 HTTTFAKGWSVPSSVKFKTPVETLRGYWDPYPIDMEFRRPCMVLSTIGLAKPGKLEGSDT 363
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
+ C HLHQLHVC+PS+R KTRLLYRMSLDFA LK+VPF+Q LW H A +VL+EDLRLV
Sbjct: 364 QSCKNHLHQLHVCIPSTRGKTRLLYRMSLDFAPWLKYVPFIQTLWVHLARKVLDEDLRLV 423
Query: 489 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 523
GQQERM GANVWNLPV YDKLGVRYR WR + E
Sbjct: 424 EGQQERMVRGANVWNLPVPYDKLGVRYRKWRVSCE 458
>gi|302804017|ref|XP_002983761.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
gi|300148598|gb|EFJ15257.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
Length = 481
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 286/455 (62%), Positives = 347/455 (76%), Gaps = 13/455 (2%)
Query: 69 GKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELA 128
+ +DVNQA E+ R+D+++ D RARQDVL I H+KVVEVLNPLAR+ KSI T+K+ELA
Sbjct: 17 SRVIDVNQAWELLRHDVEFLDLRARQDVLAIKDAHDKVVEVLNPLARETKSINTLKRELA 76
Query: 129 ELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQS 188
LQEDL +AH QVHISEARV + KLA ME +VND LLQ + T + A+ S SK
Sbjct: 77 NLQEDLQRAHAQVHISEARVNHTISKLAEMETMVNDELLQKDEEAVTVRKNATSSKSK-- 134
Query: 189 LDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK 248
LN++GPV+ Y +KN+W+PVAFS L + + + FE+ WV+FRGK
Sbjct: 135 -----------GLNIAGPVKRYPAEMKNYWYPVAFSACLDSEKPLAIEIFEKNWVLFRGK 183
Query: 249 DGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLP 308
DG GC+ + CAHRACPL LG VN+G +QCPYHGWEY+T G CEKMPST+ K+KS+P
Sbjct: 184 DGRAGCIHDACAHRACPLSLGKVNDGCLQCPYHGWEYATSGSCEKMPSTRFVPTKVKSMP 243
Query: 309 CFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
C E++G++WIWPG P + IP LLPP F +HAEI+++L +EHGLL++NLLDLAHAPFT
Sbjct: 244 CIEKDGLVWIWPGSATPESDIPSLLPPDNFTLHAEIILDLEVEHGLLMENLLDLAHAPFT 303
Query: 369 HTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
HT+TFAKGWSVPS VKF TP L+GYWDPYPIDMEFR PCMVLSTIG++KPGKLEG +T
Sbjct: 304 HTTTFAKGWSVPSSVKFQTPVETLRGYWDPYPIDMEFRRPCMVLSTIGLAKPGKLEGSDT 363
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
+ C HLHQLHVC+PS+R KTRLLYRMSLDFA LK+VPF+Q LW H A +VL+EDLRLV
Sbjct: 364 QSCKNHLHQLHVCIPSTRGKTRLLYRMSLDFAPWLKYVPFIQTLWVHLARKVLDEDLRLV 423
Query: 489 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 523
GQQERM GANVWNLPV YDKLGVRYR WR + E
Sbjct: 424 EGQQERMVRGANVWNLPVPYDKLGVRYRKWRVSCE 458
>gi|42571759|ref|NP_973970.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193915|gb|AEE32036.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 433
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/384 (72%), Positives = 323/384 (84%), Gaps = 2/384 (0%)
Query: 2 TAIATAAALSLPISL--YRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
A+ + +ALSLPIS R + ++ KK V+G FRVFA+FG+E GLV+KKS W LFDVED
Sbjct: 3 AAVFSPSALSLPISFSKTRSSFLSRKKGVKGEFRVFAVFGDESGLVEKKSQWRPLFDVED 62
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
PRSK P KGKFLDVNQA+EVAR+DIQY DWRARQD+LTIM+LH+KVV+VLNPLAR+YKS
Sbjct: 63 PRSKAPPYKGKFLDVNQAIEVARFDIQYLDWRARQDLLTIMILHDKVVDVLNPLAREYKS 122
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTC 179
IGT+KKELA LQE+L++AH+QVHISEARV+TALDKLA+ME LVNDRLL R + D+
Sbjct: 123 IGTVKKELAGLQEELSKAHQQVHISEARVSTALDKLAHMEELVNDRLLPGRVVTELDKPS 182
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
+S + S LD K KSLNVSGPV PY+ LKNFW+PVAF+ DLK DTMVP +CFE
Sbjct: 183 SSTTASAVELDREKTNTGAKSLNVSGPVPPYSPHLKNFWYPVAFTADLKHDTMVPIECFE 242
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
+PWVIFRG+DG PGCV+NTCAHRACPL LG+VNEGRIQCPYHGWEYSTDG+C+KMPST+L
Sbjct: 243 QPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYHGWEYSTDGECKKMPSTKL 302
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
VKIKSLPC EQEGMIWIWPGDEPP +P L PPSGF IHAE+VM+LP+EHGLLLDNL
Sbjct: 303 LKVKIKSLPCLEQEGMIWIWPGDEPPAPILPSLQPPSGFLIHAELVMDLPVEHGLLLDNL 362
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLV 383
LDLAHAPFTHTSTFAKGWSVP +
Sbjct: 363 LDLAHAPFTHTSTFAKGWSVPRFL 386
>gi|148906570|gb|ABR16437.1| unknown [Picea sitchensis]
Length = 303
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/300 (81%), Positives = 273/300 (91%)
Query: 232 MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC 291
MVPFDCFEEPWVIFRGKD GCVQNTCAHRACPLHLGSV +GRIQCPYHGWEY+TDG C
Sbjct: 1 MVPFDCFEEPWVIFRGKDSRAGCVQNTCAHRACPLHLGSVTDGRIQCPYHGWEYATDGVC 60
Query: 292 EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE 351
EKMPST L NV IK+LPC EQ+G+IW+WPG+E P A +P L PPSGF IHA+IVMELP+E
Sbjct: 61 EKMPSTHLLNVHIKALPCVEQDGLIWVWPGNEIPDAPLPSLAPPSGFNIHAQIVMELPVE 120
Query: 352 HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMV 411
HGLLLDNLLDLAHAPFTHTSTFAKGW +PS VKF+TPA+GLQGYWDPYPIDMEF PPCMV
Sbjct: 121 HGLLLDNLLDLAHAPFTHTSTFAKGWEIPSFVKFMTPAAGLQGYWDPYPIDMEFCPPCMV 180
Query: 412 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 471
LSTIGISKPGK+EG++T+ C+THLHQLHVC+PSSR+KTRLLYRMSLDFA +LKH+PFM
Sbjct: 181 LSTIGISKPGKIEGRSTQNCSTHLHQLHVCIPSSRQKTRLLYRMSLDFAPLLKHIPFMHI 240
Query: 472 LWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
LWRHFA++VLNEDLRLV+GQQ+RM GANVWNLPV YDKLG+RYR+WR+A+E G KQLPF
Sbjct: 241 LWRHFADKVLNEDLRLVIGQQDRMVRGANVWNLPVSYDKLGIRYRIWRNAVEDGQKQLPF 300
>gi|357438661|ref|XP_003589607.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
gi|355478655|gb|AES59858.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
Length = 575
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/305 (80%), Positives = 269/305 (88%), Gaps = 11/305 (3%)
Query: 230 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG--------RIQCP-- 279
D VP +CFEEPWVIFRGKDG PGCVQNTCAHRACPL G +++ P
Sbjct: 271 DVGVPMECFEEPWVIFRGKDGKPGCVQNTCAHRACPLPPWFCKRGSYRIAPTTKLKLPNG 330
Query: 280 -YHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF 338
GWEY+TDGKCEKMPST++ NVKIKS+PCFE+EGMIWIWPG +PP AT+P LLPPSGF
Sbjct: 331 WISGWEYTTDGKCEKMPSTRMLNVKIKSIPCFEKEGMIWIWPGSDPPAATLPSLLPPSGF 390
Query: 339 EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDP 398
+HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS V FLTPASGLQGYWDP
Sbjct: 391 IVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSFVNFLTPASGLQGYWDP 450
Query: 399 YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLD 458
YPIDMEFRPPCMVLSTIGISKPGKLEGQ+T++C+THLHQLHVCLPSS+ KTRLLYRMSLD
Sbjct: 451 YPIDMEFRPPCMVLSTIGISKPGKLEGQSTKECSTHLHQLHVCLPSSKDKTRLLYRMSLD 510
Query: 459 FASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLW 518
FA +LKH+PFM++LWRHFAEQVLNEDLRLV+GQQERMN GANVWN+PV YDKLGVRYRLW
Sbjct: 511 FAPLLKHMPFMEHLWRHFAEQVLNEDLRLVVGQQERMNKGANVWNVPVTYDKLGVRYRLW 570
Query: 519 RDALE 523
RDALE
Sbjct: 571 RDALE 575
>gi|238767622|dbj|BAH66650.1| chlorophyllide a oxygenase [Klebsormidium flaccidum]
Length = 322
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 204/311 (65%), Positives = 245/311 (78%), Gaps = 1/311 (0%)
Query: 219 FPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQC 278
+PVAFS ++ TMVP DCF EPWVIFR +DG GC+++ CAHRACPL LG++ +G++QC
Sbjct: 1 YPVAFSENVDSKTMVPIDCFNEPWVIFRDQDGKAGCIRDECAHRACPLSLGALVDGKVQC 60
Query: 279 PYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF 338
PYHGWEY+T G+C MPST +++LPC EQ+GMIWIWPGD+ P AT+P L PPSG+
Sbjct: 61 PYHGWEYTTSGECTHMPSTVQAPTSVRALPCVEQDGMIWIWPGDKVPEATLPDLSPPSGY 120
Query: 339 EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWD 397
IHA+I +E+P+EHGLL++NLLDLAHAPFTHT+TFAKGW VP+ VKF T A+ L G+WD
Sbjct: 121 TIHAQITLEVPVEHGLLVENLLDLAHAPFTHTTTFAKGWPVPNSVKFKTAAAAALSGFWD 180
Query: 398 PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL 457
PYPIDMEFRPPCMV STIG+S+PGKL G NT+ C HLHQLHVC+PS TRLLYRMSL
Sbjct: 181 PYPIDMEFRPPCMVFSTIGLSQPGKLSGTNTKDCPNHLHQLHVCVPSKTGTTRLLYRMSL 240
Query: 458 DFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRL 517
DFA K+VPF+ LW + A QVL+EDLRLV GQQ+RM GANVWN PV YDKLGVRYR
Sbjct: 241 DFAWWAKYVPFIHKLWEYMANQVLSEDLRLVEGQQDRMIRGANVWNHPVAYDKLGVRYRR 300
Query: 518 WRDALEKGAKQ 528
WR E +
Sbjct: 301 WRQQQEDSTSR 311
>gi|253787589|dbj|BAH84854.1| putative chlorophyllide a oxygenase, partial [Cucumis sativus]
Length = 235
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/235 (87%), Positives = 225/235 (95%)
Query: 259 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWI 318
CAHRACPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPST+L NVKIKSLPCFE+EGMIW+
Sbjct: 1 CAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWV 60
Query: 319 WPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
WPG++PP A +P L PP GF+IHAE+V+E+P+EHGLLLDNLLDLAHAPFTHTSTFAKGWS
Sbjct: 61 WPGNDPPAANLPSLKPPPGFQIHAELVIEIPVEHGLLLDNLLDLAHAPFTHTSTFAKGWS 120
Query: 379 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TR+C+THLHQL
Sbjct: 121 VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQL 180
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
HVCLPS+R+KTRLLYRMSLDFA VLK +PFM YLWRHFAEQVLNEDLR VLGQQE
Sbjct: 181 HVCLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRFVLGQQE 235
>gi|159463890|ref|XP_001690175.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
gi|115311321|sp|Q9ZWM5.2|CAO_CHLRE RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|61742126|gb|AAX54904.1| chloroplast chlorophyllide a oxygenase precursor [Chlamydomonas
reinhardtii]
gi|158284163|gb|EDP09913.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 645
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/488 (43%), Positives = 293/488 (60%), Gaps = 55/488 (11%)
Query: 89 DWRARQDVLTIMLLHE----KVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHIS 144
++ RQD + + E KV E L+ AR+ ++G ++ +L L+ +AQA ++ ++
Sbjct: 125 EYVTRQDAAATLAMIEEANRKVEESLSEEAREKTAVGDLRDQLESLRAQVAQAQERLAMT 184
Query: 145 EARVATALDKLAYM--EALVNDRLLQDRHTSGTDQTCASPST------------------ 184
++RV L ++ + EA +R+ + ++ + ST
Sbjct: 185 QSRVEQNLQRVNELKAEATTLERMRKASDLDIKERERIAISTVAAKGPASSSSSAAAVSA 244
Query: 185 ---------SKQSLDIVKGKLPRKSLNVSGPVQPYNTR------------------LKNF 217
+ + V ++P S P ++ L+NF
Sbjct: 245 PATSATLTVERPAATTVTQEVPSTSYGTPVDRAPRRSKAAIRRSRGLESSMEIEEGLRNF 304
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P FS L DT+VPF+ F EPWV+FR + G P C+++ CAHR CPL LG V EG++
Sbjct: 305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVM 364
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PP 335
CPYHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T+P PP
Sbjct: 365 CPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDFAQPP 424
Query: 336 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY 395
GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF L G+
Sbjct: 425 EGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKALSGF 483
Query: 396 WDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 454
WDPYPIDM F+PPCM LSTIG+++PGK + G QC HLHQLHVC+PS + TRLLYR
Sbjct: 484 WDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTRLLYR 543
Query: 455 MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVR 514
MSLDF ++HVPF+ +W+ A QVL EDL LVLGQQ+RM G + W+ P YDKL VR
Sbjct: 544 MSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDKLAVR 603
Query: 515 YRLWRDAL 522
YR WR+ +
Sbjct: 604 YRRWRNGV 611
>gi|302844701|ref|XP_002953890.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
gi|300260702|gb|EFJ44919.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
Length = 657
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/496 (43%), Positives = 301/496 (60%), Gaps = 70/496 (14%)
Query: 89 DWRARQDVLTIMLLHE----KVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHIS 144
++ +QD + + E KV E L+ AR+ ++G ++++L LQ + +A ++ ++
Sbjct: 134 EYVTKQDAAATLAMIEEANRKVEEALSEEARERTAVGDLREQLQVLQRQVQEAQERLQLT 193
Query: 145 EARVATALDKLAYMEA-------LVNDRLLQDR--------------------------- 170
+ARV L+++ ++A + N R+ DR
Sbjct: 194 QARVEQNLNRVNELKAEAVGLERMRNGRMGGDRKKELQVAAPVAVTAAASAARPAVSATA 253
Query: 171 ---------------------HTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQP 209
+ S + +P + + I +G+ SL+
Sbjct: 254 VAESVPAAIVTVEPPTRSYTPNGSSDGTSVVAPPGRRSKVAIRRGRGLESSLD------- 306
Query: 210 YNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
+ L+NFW+P FS L DT+VPF+ F EPWV+FR + G P C+++ CAHRACPL LG
Sbjct: 307 FEPGLRNFWYPAEFSAKLGQDTLVPFELFGEPWVLFRDEKGQPACIKDECAHRACPLSLG 366
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
V EG++ C YHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T
Sbjct: 367 KVVEGQVVCAYHGWEFNGDGHCTKMPSTPHCRNVGVSALPCAEKDGFIWVWPGDGLPAQT 426
Query: 329 IPCLL-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
+P PP GF++HAEI++++P+EHGLL++NLLDLAHAPFTHT+TFA+GW VP VKF T
Sbjct: 427 LPDFARPPEGFQVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWPVPDFVKFHT 486
Query: 388 PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSR 446
L GYWDPYPIDM F+PPCMVLSTIG+++PGK + G QC HLHQLHVC+PS +
Sbjct: 487 -NKLLSGYWDPYPIDMAFQPPCMVLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKK 545
Query: 447 KKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPV 506
TRLLYRMSLDF +++VPF+ +W++ A QVL EDL LVLGQQ+R+ G N W+ P
Sbjct: 546 GHTRLLYRMSLDFLPWMRYVPFIDKVWKNVAGQVLGEDLVLVLGQQDRLLRGGNTWSNPA 605
Query: 507 GYDKLGVRYRLWRDAL 522
YDKL VRYR WR+++
Sbjct: 606 PYDKLAVRYRRWRNSV 621
>gi|5478799|dbj|BAA82480.1| chlorophyll b synthase [Marchantia polymorpha]
Length = 282
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 190/280 (67%), Positives = 226/280 (80%), Gaps = 1/280 (0%)
Query: 228 KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYST 287
+ D M+P + FEEPWV+FRGKDG GCV++ CAHRACPL LG+V +GRIQCPYHGWEY+T
Sbjct: 4 ESDIMIPIESFEEPWVLFRGKDGRAGCVRDECAHRACPLSLGTVVDGRIQCPYHGWEYNT 63
Query: 288 DGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVME 347
GKCEKMPST+ I++LPC EQ+GM+WIWPGDE P AT+P LLPP + IHAEIV+E
Sbjct: 64 GGKCEKMPSTRPLKTGIRALPCIEQDGMVWIWPGDETPAATLPSLLPPENYTIHAEIVLE 123
Query: 348 LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRP 407
LP+EHGLL++NLLDLAHAPFTHTSTFAKGWSVP++VKF TP L G WDPYPIDM F+P
Sbjct: 124 LPVEHGLLMENLLDLAHAPFTHTSTFAKGWSVPNMVKFKTPMQALSGNWDPYPIDMAFQP 183
Query: 408 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP 467
PCMVLSTIG+ KPGKL+G +T C+ HLHQLHVC+PSSR KTRL+YR + + +P
Sbjct: 184 PCMVLSTIGLVKPGKLDGSSTASCSKHLHQLHVCMPSSRGKTRLMYRWLWTLPNG-RSMP 242
Query: 468 FMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 507
++ +W H A QVLNEDLRLV GQQ+RM GANVW PVG
Sbjct: 243 YIDRVWTHLANQVLNEDLRLVEGQQDRMKRGANVWQTPVG 282
>gi|3786324|dbj|BAA33964.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 463
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 185/312 (59%), Positives = 230/312 (73%), Gaps = 4/312 (1%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+NFW+P FS L DT+VPF+ F EPWV+FR + G P +++ CAHR CPL LG V E
Sbjct: 119 LRNFWYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSYIRDECAHRGCPLSLGKVVE 178
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G++ CPYHGWE++ DG C KMPST RNV + +LPC E++G IW+WPGD P T+P
Sbjct: 179 GQVMCPYHGWEFNGDGACTKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDF 238
Query: 333 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 391
PP GF IHAEI++++P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF
Sbjct: 239 AQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTHTSTFARGWPVPDFVKFHA-NKA 297
Query: 392 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHVCLPSSRKKTR 450
L G+WDPYPIDM F+PPCM LSTIG+++PGK + G QC HLHQLHVC+PS + TR
Sbjct: 298 LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTR 357
Query: 451 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 510
LLYRMSLDF ++HVPF+ +W+ A QVL EDL LVLGQQ+RM G + W+ P YDK
Sbjct: 358 LLYRMSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDK 417
Query: 511 LGVRYRLWRDAL 522
L VRYR WR+ +
Sbjct: 418 LAVRYRRWRNGV 429
>gi|384246692|gb|EIE20181.1| PaO-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/319 (58%), Positives = 232/319 (72%), Gaps = 5/319 (1%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+L++FW+PVAFS+ LKD MV + F +PWV+FR G+P CV++ CAHRACPL LGSV
Sbjct: 14 QLQDFWYPVAFSSQLKDGAMVTMELFGKPWVLFRDAQGLPSCVKDACAHRACPLSLGSVV 73
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP- 330
+G IQCPYHGW+Y G C KMPST + + + +LP E EG +W+WPG P +P
Sbjct: 74 DGCIQCPYHGWQYDGSGNCTKMPSTAFCKGITVSTLPVSESEGFVWVWPGRSVPEHNVPQ 133
Query: 331 -CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 389
PP GF +HAE+++E+P+EHGLLL+NLLDLAHAPFTHTSTFAKGW VP +VKF A
Sbjct: 134 HVTRPPDGFTVHAELILEVPVEHGLLLENLLDLAHAPFTHTSTFAKGWPVPDVVKF-NAA 192
Query: 390 SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKK 448
L G W+PYPIDM F PPCMVLSTIG+++PGK+E G C HLHQLHVCLP+ +
Sbjct: 193 RMLGGNWEPYPIDMAFEPPCMVLSTIGLAQPGKIERGARAASCKNHLHQLHVCLPAGPGR 252
Query: 449 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGY 508
TRLLYRMS+DF K VP +Q W H A+QV+ EDL LV GQQ+RM GA+VW PV Y
Sbjct: 253 TRLLYRMSMDFLQWTKAVPGIQAFWAHIAKQVMGEDLVLVAGQQDRMLRGADVWANPVAY 312
Query: 509 DKLGVRYRLWRDALEKGAK 527
DKLGVRYR WR+++ G+
Sbjct: 313 DKLGVRYRRWRNSVAAGSS 331
>gi|75215802|sp|Q9XJ38.1|CAO_DUNSA RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|5478801|dbj|BAA82481.1| chlorophyll b synthase [Dunaliella salina]
Length = 463
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 269/445 (60%), Gaps = 44/445 (9%)
Query: 123 MKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEA----LVNDRL------------ 166
M+ +L LQ+++++A ++ SEARVA L ++ ++A L RL
Sbjct: 1 MQSKLLGLQDEISEARDKLRTSEARVAQNLKRVDELKAEAASLERMRLASSSSTDSTVSI 60
Query: 167 ----------------------LQDR-HTSGTDQTCASPSTSKQSLDIVKGKLPRKSLNV 203
+Q R SG T + S + +G P+ S +
Sbjct: 61 ASRGGAAVAATTSVPDHVEREGIQSRVRGSGMASTSYPSHVPQPSQAVRRGPKPKDSRRL 120
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
++ L+NFW+P F+ L+ MVPFD F PWV+FR + P C++++CAHRA
Sbjct: 121 RSSLE-LEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTCIKDSCAHRA 179
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD 322
CPL LG V G +QCPYHGWE+ G C KMPST++ V + +LPC E++G +W+WPGD
Sbjct: 180 CPLSLGKVINGHVQCPYHGWEFDGSGACTKMPSTRMCHGVGVAALPCVEKDGFVWVWPGD 239
Query: 323 EPPTATIPCLL-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 381
PP P PP+G+++HAEI++++P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P
Sbjct: 240 GPPPDLPPDFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAHAPFTHTTTFARGWPIPE 299
Query: 382 LVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQNTRQCATHLHQLHV 440
V+F L G WDPYPI M F PPC+ LSTIG+S+PGK + G +C HLHQLHV
Sbjct: 300 AVRFHA-TKMLAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHV 358
Query: 441 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 500
C+PS TRLLYRMSLDF KHVPF+ LW+ A QVL EDL LVLGQQ RM G +
Sbjct: 359 CMPSKEGHTRLLYRMSLDFWGWAKHVPFVDVLWKKIAGQVLGEDLVLVLGQQARMIGGDD 418
Query: 501 VWNLPVGYDKLGVRYRLWRDALEKG 525
W P+ YDKL VRYR WR+ + G
Sbjct: 419 TWCTPMPYDKLAVRYRRWRNMVADG 443
>gi|307103693|gb|EFN51951.1| hypothetical protein CHLNCDRAFT_54799 [Chlorella variabilis]
Length = 683
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/335 (53%), Positives = 229/335 (68%), Gaps = 11/335 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN WF VAF + L + VPF+ F + WV+FR +G P CV + CAHR CPL LG V +
Sbjct: 327 LKNHWFAVAFVSKLGPEDKVPFELFGQAWVLFRDSEGRPACVLDECAHRGCPLSLGQVVD 386
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + CPYHGW ++ G+C KMPST L R V + +LPC EQ+G +W+WPG E PT +P +
Sbjct: 387 GNLVCPYHGWRFNGKGECTKMPSTNLCRGVAVSALPCAEQDGFVWVWPGWEEPTLPLPAV 446
Query: 333 L-PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG 391
PP+G+ IHAEI +E+P+EHGLL++NLLDLAHAPFTHTSTFA+GW VP VKF +
Sbjct: 447 TRPPAGYRIHAEIEVEVPVEHGLLVENLLDLAHAPFTHTSTFARGWPVPDAVKFHA-SRL 505
Query: 392 LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTR 450
L G WDPYPI+M F PPCM LS +G+++PGK G + C HLHQLHVCLPS TR
Sbjct: 506 LGGNWDPYPIEMSFNPPCMTLSHVGLARPGKAGVGATPQDCQNHLHQLHVCLPSRAGHTR 565
Query: 451 LLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDK 510
LLYRM+ DF + +P +Q+ WR+ A QVL EDL LVLGQQ+R+ G + W PV YDK
Sbjct: 566 LLYRMATDFLWWTELLPGIQHFWRYIAGQVLGEDLVLVLGQQDRLLRGGDTWRHPVSYDK 625
Query: 511 LGVRYRLWRDALE-------KGAKQLPFMKPMQTR 538
L VRYR WR++L +GA+ +P+ R
Sbjct: 626 LAVRYRRWRNSLSLNGGAAPEGARPAAASQPITMR 660
>gi|238767606|dbj|BAH66642.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 338
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/312 (55%), Positives = 221/312 (70%), Gaps = 4/312 (1%)
Query: 220 PVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCP 279
P+ FS L ++T++P + F EPWV+FR +G C+Q+ CAHRACPL LGSV G + C
Sbjct: 1 PIEFSAQLVENTLIPLELFGEPWVLFRDAEGKAACLQDQCAHRACPLSLGSVQNGNVTCA 60
Query: 280 YHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPG-DEPPTATIPCLLPPSG 337
YHGW+++ G CE+MPST +NV +K+L E++GMI+ W G D+ P IP L PP+G
Sbjct: 61 YHGWQFNGQGDCEEMPSTPHCKNVGVKALQVTEKDGMIFAWTGEDDEPDIPIPELAPPAG 120
Query: 338 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWD 397
F IH+EI ME+P+EHGLL++NLLDLAHAPFTHT+TFA+GW +P V+F L G WD
Sbjct: 121 FVIHSEITMEVPVEHGLLVENLLDLAHAPFTHTATFARGWPIPEAVRFHL-LDKLSGNWD 179
Query: 398 PYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS 456
PYPIDM F PP M S IG+++PGK+E G +C HLHQLHVCLP+ TRLLYRMS
Sbjct: 180 PYPIDMAFLPPVMTESKIGLNQPGKIERGVRCDECDKHLHQLHVCLPAKEGHTRLLYRMS 239
Query: 457 LDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
LDF ++ +P +Q +W+ A QVL EDLRLVLGQQ+RM G + W+ PV YDKL VRYR
Sbjct: 240 LDFMGWVRFIPGIQRVWKEVANQVLGEDLRLVLGQQDRMKRGGHTWSFPVPYDKLAVRYR 299
Query: 517 LWRDALEKGAKQ 528
WR+ L + Q
Sbjct: 300 RWRNGLAESKGQ 311
>gi|38488613|dbj|BAD02269.1| chlorophyllide a oxygenase [Prochlorothrix hollandica]
Length = 366
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 180/336 (53%), Positives = 223/336 (66%), Gaps = 14/336 (4%)
Query: 198 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 257
SLNVS + N L+NFW+PV FS +L + F+ F++ WV+FR G C+ +
Sbjct: 2 NNSLNVSATLDLANG-LRNFWYPVEFSKNLGMADPLGFELFDQCWVLFRDDQGTAACILD 60
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIW 317
CAHRACPL LG V +GRIQCPYHGWEY G+C MPS Q + I +LP EQ GMIW
Sbjct: 61 ECAHRACPLSLGKVIQGRIQCPYHGWEYDRQGECVHMPSCQAISNPILTLPVMEQGGMIW 120
Query: 318 IWPGDEPPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+WPG + P A +P L P P F + AE+VM+L +EHGL+L+NLLDLAHAPFTHT TFAK
Sbjct: 121 VWPGTDEPGA-LPSLAPTLPDNFTLQAELVMDLEVEHGLMLENLLDLAHAPFTHTGTFAK 179
Query: 376 GWSVPSLVKFLTPASG-LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
GW VP V+F A+ G+WDPYPI M F PPC V+STIG+ + C H
Sbjct: 180 GWPVPPFVRFANAATTPWTGHWDPYPIHMTFEPPCFVISTIGLRG---------KDCGRH 230
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 494
LHQ+H CLP + +TRLLYR++LDF L+ VP LW+H A +V+ EDLRLV GQQER
Sbjct: 231 LHQVHACLPRGQGRTRLLYRLALDFGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQER 290
Query: 495 MNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 530
+ GANVWN PVGYDKLGV YR WR+ +E+ P
Sbjct: 291 LKGGANVWNQPVGYDKLGVAYRHWRNQVERHGSDWP 326
>gi|238767620|dbj|BAH66649.1| chlorophyllide a oxygenase [Mesostigma viride]
Length = 299
Score = 367 bits (943), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 165/282 (58%), Positives = 211/282 (74%), Gaps = 2/282 (0%)
Query: 248 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-NVKIKS 306
+DG C+++ CAHRACPL LG+V G CPYHGW+Y TDGKC KMP T+LR V++ +
Sbjct: 2 EDGRVACLRDECAHRACPLSLGTVENGHATCPYHGWQYDTDGKCTKMPQTRLRAQVRVST 61
Query: 307 LPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 366
LP E +GMIW++PG P +P LPPS F +HAE+V+E+PIEHGL+++NLLDLAHAP
Sbjct: 62 LPVREHDGMIWVYPGSNEPPEHLPSFLPPSNFTVHAELVLEVPIEHGLMIENLLDLAHAP 121
Query: 367 FTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-G 425
FTHT TFAKGWSVP V F A L G+W+PYPI M+F PPCM +S IG++KPG+LE G
Sbjct: 122 FTHTETFAKGWSVPDSVNFKVAAQSLAGHWEPYPISMKFEPPCMTISEIGLAKPGQLEAG 181
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
+ + +C HLHQLHVC+P+ +TR+LYRM LDFA +K++P +Q +W A QVL EDL
Sbjct: 182 KFSGECKQHLHQLHVCMPAGEGRTRILYRMCLDFAHWVKYIPGIQNVWSGMATQVLGEDL 241
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 527
RLV GQQ+RM GA++W PV YDKLGVRYR WR A+E+ +
Sbjct: 242 RLVEGQQDRMLRGADIWYNPVAYDKLGVRYRSWRRAVERNTR 283
>gi|413951241|gb|AFW83890.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 290
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 185/286 (64%), Positives = 219/286 (76%), Gaps = 8/286 (2%)
Query: 4 IATAAALSL-PISLYRPA-KINTKKSV--RGGFRVFALFGEEGGLVDKKSAWSTLFDVED 59
+ T A LSL P L +P+ ++K V GG +V+A+ ++G K + LF V+D
Sbjct: 1 MNTVALLSLAPQLLIKPSLTCFSRKGVGRYGGIKVYAVLRDDGAEFAKNNNLEALFHVDD 60
Query: 60 PRSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKS 119
P +VP KGKFLDVN+ALEV R+DIQYCDWRAR D+LTIM+LH KVVEVLNPLAR++KS
Sbjct: 61 PGPRVPIKKGKFLDVNEALEVVRFDIQYCDWRARHDLLTIMVLHNKVVEVLNPLAREFKS 120
Query: 120 IGTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQ-- 177
IGT++KELAELQ++LA+AH QVH+SE RV++ALDKLA+ME LVNDRLL S T
Sbjct: 121 IGTLRKELAELQQELAKAHNQVHLSETRVSSALDKLAHMETLVNDRLLPPDGASSTSTAQ 180
Query: 178 -TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFD 236
T PSTS + + K PR+ LNVSGPV+PYN LKNFW+PVAFS+DLKDDTMVP
Sbjct: 181 PTSLVPSTSSTA-RVRAKKPPRRGLNVSGPVKPYNPSLKNFWYPVAFSSDLKDDTMVPIA 239
Query: 237 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 282
CFEE WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 240 CFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 285
>gi|238767600|dbj|BAH66639.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 297
Score = 365 bits (936), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 221/296 (74%), Gaps = 7/296 (2%)
Query: 221 VAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 280
V F++ L D MVPF+CFEE WV+FR +DG GC+++ CAHRACPL LG+V G+ C Y
Sbjct: 2 VEFTSRLGKDIMVPFECFEESWVLFRDEDGKAGCIKDECAHRACPLSLGTVENGQATCAY 61
Query: 281 HGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC--LLPP 335
HGW++ST G+C K+PS R V ++++P EQ+GMIWIWPGDE P IP +LPP
Sbjct: 62 HGWQFSTGGECTKIPSVGARGCSGVGVRAMPTVEQDGMIWIWPGDEKPAEHIPSKEVLPP 121
Query: 336 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQG 394
+G +HAEIV+++P+EHGLLL+NLLDLAHAPFTHTSTFAKGW+VP LVKF T L G
Sbjct: 122 AGHTLHAEIVLDVPVEHGLLLENLLDLAHAPFTHTSTFAKGWAVPELVKFSTDKVRALGG 181
Query: 395 YWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
W+PYPIDM F PPCMVLSTIG+++PGK++ G +C HLHQLHVC+PS KTRLLY
Sbjct: 182 AWEPYPIDMSFEPPCMVLSTIGLAQPGKVDAGVRASECEKHLHQLHVCMPSGAGKTRLLY 241
Query: 454 RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYD 509
RM LDF LK+VP M +W A QVL EDLRLVLGQQ+R+ G +VW+ P+ YD
Sbjct: 242 RMHLDFMPFLKYVPGMHLVWEAMANQVLGEDLRLVLGQQDRLQRGGDVWSNPMEYD 297
>gi|238767608|dbj|BAH66643.1| chlorophyllide a oxygenase [Prasinoderma coloniale]
Length = 304
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 210/297 (70%), Gaps = 13/297 (4%)
Query: 246 RGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-QLRNVKI 304
R +G+ GCV+++CAHRACPL LG G++QCPYHGWE+ TDG+C K PST +L+N+++
Sbjct: 1 RDANGVAGCVRDSCAHRACPLSLGKNVGGKVQCPYHGWEFETDGRCTKTPSTNELKNIRV 60
Query: 305 KSLPCFEQEGMIWIWPGDEPPTA---TIPCLLPPSG-FEIHAEIVMELPIEHGLLLDNLL 360
++LP E++GMIW++PG+E P L PP F IHAEIV+ +P+EHGLL++NLL
Sbjct: 61 EALPVVERDGMIWVYPGEEDPPEDHQNFTALAPPGDEFTIHAEIVLTVPVEHGLLMENLL 120
Query: 361 DLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-------GLQGYWDPYPIDMEFRPPCMVLS 413
DLAHAPFTHTSTFAKGWSVP V F T + GL G W PYPIDM F+PPCMVLS
Sbjct: 121 DLAHAPFTHTSTFAKGWSVPDRVDFKTVKNAVAQQIGGLGGEWQPYPIDMTFQPPCMVLS 180
Query: 414 TIGISKPGKLEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 472
IG+ KPG++E + C HLHQLHVCLP+ +TRLLYRMSLDFA K++PF+
Sbjct: 181 QIGLVKPGQVEAETRASDCDRHLHQLHVCLPAKDGETRLLYRMSLDFAKFAKNLPFVSEF 240
Query: 473 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 529
W A QVL EDL LV GQQ M G +VW+ PV YDKLGVRYR WR ++ G L
Sbjct: 241 WEELANQVLGEDLVLVEGQQRNMKAGMDVWSNPVAYDKLGVRYRRWRTGVQYGNPSL 297
>gi|238767610|dbj|BAH66644.1| chlorophyllide a oxygenase [Picocystis salinarum]
Length = 318
Score = 344 bits (882), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 173/305 (56%), Positives = 215/305 (70%), Gaps = 13/305 (4%)
Query: 245 FRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP--STQLRNV 302
FR ++G CV + C HRACPL +G V +G I CPYHGWE + +G C MP + Q+
Sbjct: 1 FRDQEGKAVCVHDECPHRACPLSIGKVIDGNIACPYHGWEVNGEGVCVNMPQVTPQVEAG 60
Query: 303 K--IKSLPCFEQEGMIWIWPGDE----PPTATIPCLLPPS--GFEIHAEIVMELPIEHGL 354
+ ++ LPC E GMIWIW G++ PP + LLPP+ GF +HAEI M++P+EHGL
Sbjct: 61 RPCVQKLPCEEVGGMIWIWTGEDGIPIPPVESDR-LLPPTNKGFSLHAEIAMDVPVEHGL 119
Query: 355 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLS 413
L++NLLDLAHAPFTHTSTFAKGWSVP LV F T A+ L G W+PYPIDM F PPCM LS
Sbjct: 120 LIENLLDLAHAPFTHTSTFAKGWSVPDLVNFQTAAARALAGNWEPYPIDMSFEPPCMTLS 179
Query: 414 TIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 472
TIG+++PGKLE G QC HLHQ+HVCLP+ K TRLLYRM LDF K+VP +Q L
Sbjct: 180 TIGLAQPGKLESGVRQSQCKNHLHQMHVCLPAGPKSTRLLYRMHLDFLGWAKNVPGIQKL 239
Query: 473 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFM 532
W + A QVL EDLRLVLGQQ+R+ G +VW PV YDKLGVRYR WR++L+ +++
Sbjct: 240 WEYMAGQVLGEDLRLVLGQQDRLERGGDVWGHPVPYDKLGVRYRRWRNSLDDVSEKEQVE 299
Query: 533 KPMQT 537
M+T
Sbjct: 300 SDMRT 304
>gi|238767602|dbj|BAH66640.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 305
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/287 (58%), Positives = 208/287 (72%), Gaps = 8/287 (2%)
Query: 248 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKI 304
+DG CV++ CAHRACPL LG+V G+ C YHGW++ DG C ++PS R + I
Sbjct: 2 EDGTAACVKDECAHRACPLSLGTVEGGKATCAYHGWKFGGDGACTEIPSVGSRGAAGISI 61
Query: 305 KSLPCFEQEGMIWIWPGDEPPTATIP-CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA 363
+SLP E +G++W+WPG P A IP L P GF +HAEIV+++P+EHGLLL+NLLDLA
Sbjct: 62 RSLPVQEVDGLVWVWPGSAEPAAEIPRDLRVPEGFTLHAEIVLDVPVEHGLLLENLLDLA 121
Query: 364 HAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
HAPFTHTSTFAKGW+VP LVKF T L G WDPYPIDM F PPC VLS IG+ KPG+
Sbjct: 122 HAPFTHTSTFAKGWAVPDLVKFSTDKMRTLGGAWDPYPIDMSFEPPCHVLSLIGLEKPGE 181
Query: 423 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ G +C HLHQLHVCLPS +TRLLYRMSLDF +KHVP ++ +W A QVL
Sbjct: 182 VASGTRAGECERHLHQLHVCLPSREGQTRLLYRMSLDFLPWVKHVPGIKMVWEAMAAQVL 241
Query: 482 NEDLRLVLGQQERM-NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 527
EDLRLV GQQ+RM N GA +W P+GYD+LGV+YR+WR++L GAK
Sbjct: 242 GEDLRLVAGQQDRMVNEGAQIWGNPMGYDELGVKYRMWRNSL-AGAK 287
>gi|238767604|dbj|BAH66641.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 264
Score = 330 bits (847), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 249 DGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSL 307
DGI CV++ CAHRACPL LG V +G+++CPYHGW Y+ G+C KMPST+ + V +KSL
Sbjct: 3 DGIAACVKDECAHRACPLSLGQVVDGQVECPYHGWAYNRGGECTKMPSTRYCKGVGVKSL 62
Query: 308 PCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 367
EQ+G+IW+WPG PT +P P GF HAE+++++P+EHGLL++NLLDLAHAPF
Sbjct: 63 TVQEQDGLIWVWPGGAEPTTEVPRFHAPEGFTTHAELMLDVPVEHGLLIENLLDLAHAPF 122
Query: 368 THTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE-GQ 426
THTSTFAKGWS+P LV + L G WDPYPIDM F PC+ LSTIG+++PG++E G
Sbjct: 123 THTSTFAKGWSIPELVNIKMNGA-LVGNWDPYPIDMSFEAPCITLSTIGLARPGQVEKGL 181
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 486
C HL+Q+HVCLPS + TRLLYRM+LDF +++VPF+ +W+ A QVL EDLR
Sbjct: 182 RAEDCPKHLYQMHVCLPSKKGHTRLLYRMALDFMPWVQYVPFINSVWQQMANQVLGEDLR 241
Query: 487 LVLGQQERMNNGANVWNLPVGYD 509
LVLGQQERM G++ W PV YD
Sbjct: 242 LVLGQQERMAVGSDTWANPVSYD 264
>gi|414878610|tpg|DAA55741.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 279
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 165/267 (61%), Positives = 196/267 (73%), Gaps = 33/267 (12%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAHRQVHISEARVA 149
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH QVH+SEARV+
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQVHLSEARVS 148
Query: 150 TALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------------VKGKL 196
+ALDKLA+ME LV ++PST++ K K
Sbjct: 149 SALDKLAHMETLV-----------------SAPSTAEPPTSSSLSATASSTARVRAKNKQ 191
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCV 255
PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DCFEE WVIFRGKDG PGCV
Sbjct: 192 PRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCV 251
Query: 256 QNTCAHRACPLHLGSVNEGRIQCPYHG 282
QNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 252 QNTCAHRACPLHLGSVNEGRIQCPYHG 278
>gi|5478805|dbj|BAA82483.1| chlorophyll b synthase [Prochloron didemni]
Length = 276
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 152/285 (53%), Positives = 191/285 (67%), Gaps = 13/285 (4%)
Query: 226 DLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY 285
++ T +PF+ F+ W++FR ++ GC+ + CAHRAC L LG V GR+QC YHGWEY
Sbjct: 2 NVNTTTPMPFELFDRSWILFRDRNSNIGCIHDRCAHRACTLSLGKVVNGRVQCAYHGWEY 61
Query: 286 STDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP--PSGFEIHAE 343
+T+G CE MPS + +K+LP EQ GMIW+WPG P +P L P P F + AE
Sbjct: 62 NTEGTCEVMPSCKQTKAAVKALPAIEQSGMIWVWPGSGVP-GELPKLAPAIPENFTLQAE 120
Query: 344 IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT-PASGLQGYWDPYPID 402
I MEL +EHGL ++NLLDLAHAPFTHT TFAKGW VP V+F P + L G+WDPYPID
Sbjct: 121 ITMELDVEHGLFMENLLDLAHAPFTHTGTFAKGWPVPDFVRFANLPKTPLTGHWDPYPID 180
Query: 403 MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 462
M F PPC V+STIG+ R C HLHQ+HVCLP + KTRLLYR++LDF
Sbjct: 181 MSFEPPCYVISTIGLRG---------RDCGRHLHQVHVCLPKGKGKTRLLYRLALDFYKW 231
Query: 463 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 507
L+ VP M W H A++V+ ED+RLV GQQ+ + G NVWN PVG
Sbjct: 232 LRFVPGMNLFWEHMAQRVIGEDIRLVRGQQKSLQEGGNVWNQPVG 276
>gi|357438645|ref|XP_003589598.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
gi|355478646|gb|AES59849.1| Chlorophyllide a oxygenase, partial [Medicago truncatula]
Length = 231
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 163/233 (69%), Positives = 194/233 (83%), Gaps = 5/233 (2%)
Query: 1 MTAIATAAALSLPISLYRPAKINTKKSVRGGFRVFALFGEEGGLVDKKSAWSTLFDVEDP 60
M AIATA+ALSLPI R +K++TK+ ++G F VFA+FGE DKKSAW +FDV+DP
Sbjct: 1 MNAIATASALSLPI-FCRTSKLDTKRGLKGKFGVFAVFGE----ADKKSAWGAIFDVQDP 55
Query: 61 RSKVPQCKGKFLDVNQALEVARYDIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSI 120
RSK P KGK LDV QA+EVAR+DI+Y DWRARQDVLTIMLLHEKVVEVLNPLAR++KSI
Sbjct: 56 RSKAPLSKGKVLDVFQAIEVARHDIEYLDWRARQDVLTIMLLHEKVVEVLNPLAREFKSI 115
Query: 121 GTMKKELAELQEDLAQAHRQVHISEARVATALDKLAYMEALVNDRLLQDRHTSGTDQTCA 180
GTMKK+LA LQ++LA+AHRQVHISEARV+TALDKLAYME LVNDRLLQDR T+ +T +
Sbjct: 116 GTMKKDLAGLQDELAEAHRQVHISEARVSTALDKLAYMEELVNDRLLQDRSTAEVAETSS 175
Query: 181 SPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV 233
PSTS +S+ + + P+KSLNVSGPVQ Y+ LKNFW+PVAFS DLKDD+MV
Sbjct: 176 PPSTSNKSVHTERRRKPKKSLNVSGPVQSYHPNLKNFWYPVAFSADLKDDSMV 228
>gi|414878609|tpg|DAA55740.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 280
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/268 (61%), Positives = 197/268 (73%), Gaps = 34/268 (12%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARV 148
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARV 148
Query: 149 ATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------------VKGK 195
++ALDKLA+ME LV ++PST++ K K
Sbjct: 149 SSALDKLAHMETLV-----------------SAPSTAEPPTSSSLSATASSTARVRAKNK 191
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGC 254
PR+ L+VSGPV+PYN LKNFW+PVAFS+DLK DTMVP DCFEE WVIFRGKDG PGC
Sbjct: 192 QPRRRLDVSGPVKPYNPSLKNFWYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGC 251
Query: 255 VQNTCAHRACPLHLGSVNEGRIQCPYHG 282
VQNTCAHRACPLHLGSVNEGRIQCPYHG
Sbjct: 252 VQNTCAHRACPLHLGSVNEGRIQCPYHG 279
>gi|71534968|gb|AAZ32888.1| putative chlorophyll synthase [Medicago sativa]
Length = 219
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/198 (83%), Positives = 182/198 (91%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
P+KSLNVSGPVQ Y+ LKNFW+PVAFS DLKDD+M+P +CFEEPWVIFRGKDG PGCVQ
Sbjct: 9 PKKSLNVSGPVQSYHPNLKNFWYPVAFSADLKDDSMIPMECFEEPWVIFRGKDGKPGCVQ 68
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMI 316
NTCAHRACPLHLGSVNEGRI CPYHGWEY+TDGKCEKMPST++ NVKIKS+PCFE+EGMI
Sbjct: 69 NTCAHRACPLHLGSVNEGRIACPYHGWEYTTDGKCEKMPSTRMLNVKIKSIPCFEKEGMI 128
Query: 317 WIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
WIWPG +PP ++P LLPPSGF +HAEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKG
Sbjct: 129 WIWPGSDPPAPSLPSLLPPSGFIVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKG 188
Query: 377 WSVPSLVKFLTPASGLQG 394
WS PS V FLTPASGLQG
Sbjct: 189 WSGPSFVNFLTPASGLQG 206
>gi|238006758|gb|ACR34414.1| unknown [Zea mays]
Length = 196
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/187 (87%), Positives = 174/187 (93%), Gaps = 1/187 (0%)
Query: 346 MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF 405
MELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF
Sbjct: 1 MELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEF 60
Query: 406 RPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH 465
RPPCMVLSTIGISKPGKL+G++TRQC+THLHQLHVCLPSSR KTRLLYRMSLDFA LKH
Sbjct: 61 RPPCMVLSTIGISKPGKLQGKSTRQCSTHLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKH 120
Query: 466 VPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
VP M LW HFAE+VLNEDLRLVLGQQE M +GANVWN PV YDKLG+RYRLWRDA+E+G
Sbjct: 121 VPLMHLLWSHFAEKVLNEDLRLVLGQQEGMIDGANVWNWPVSYDKLGIRYRLWRDAVERG 180
Query: 526 A-KQLPF 531
A +LPF
Sbjct: 181 ADDRLPF 187
>gi|5478803|dbj|BAA82482.1| chlorophyll b synthase [Prochlorothrix hollandica]
Length = 276
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/285 (54%), Positives = 191/285 (67%), Gaps = 13/285 (4%)
Query: 226 DLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEY 285
DL + F+ F++ WV+FR G C+ + CAHRACPL LG V +GRIQCPYHGWEY
Sbjct: 2 DLGMADPLGFELFDQCWVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQCPYHGWEY 61
Query: 286 STDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP--PSGFEIHAE 343
G+C MPS Q + I +LP EQ GMIW+WPG + P A +P L P P F + AE
Sbjct: 62 DRQGECVHMPSCQAISNPILTLPVMEQGGMIWVWPGTDEPGA-LPSLAPTLPDNFTLQAE 120
Query: 344 IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASG-LQGYWDPYPID 402
+VM+L +EHGL+L+NLLDLAHAPFTHT TFAKGW VP V+F A+ G+WDPYPI
Sbjct: 121 LVMDLEVEHGLMLENLLDLAHAPFTHTGTFAKGWPVPPFVRFANAATTPWTGHWDPYPIH 180
Query: 403 MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 462
M F PPC V+STIG+ + C HLHQ+H CLP + +TRLLYR++LDF
Sbjct: 181 MTFEPPCFVISTIGLRG---------KDCGRHLHQVHACLPRGQGRTRLLYRLALDFGHW 231
Query: 463 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVG 507
L+ VP LW+H A +V+ EDLRLV GQQER+ GANVWN PVG
Sbjct: 232 LRWVPGTHCLWQHLANRVIQEDLRLVQGQQERLKGGANVWNQPVG 276
>gi|383162350|gb|AFG63810.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162356|gb|AFG63813.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162362|gb|AFG63816.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162366|gb|AFG63818.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162368|gb|AFG63819.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162372|gb|AFG63821.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162374|gb|AFG63822.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162376|gb|AFG63823.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162378|gb|AFG63824.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
Length = 152
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 117/149 (78%), Positives = 140/149 (93%)
Query: 383 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 442
VKF+TPA+GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK+EG++T+ C+THLHQLHVC+
Sbjct: 1 VKFMTPATGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKIEGRSTQNCSTHLHQLHVCI 60
Query: 443 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVW 502
PSSR+KTRLLYRMSLDFA +L+H+PFM LWRHFA++VLNEDLRLV+GQQ+RM G+NVW
Sbjct: 61 PSSRQKTRLLYRMSLDFAPLLQHIPFMHILWRHFADKVLNEDLRLVIGQQDRMVRGSNVW 120
Query: 503 NLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
NLPV YDKLG+RYR+WR+A+E G ++LPF
Sbjct: 121 NLPVSYDKLGIRYRIWRNAVEDGQQRLPF 149
>gi|383162346|gb|AFG63808.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162348|gb|AFG63809.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162352|gb|AFG63811.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162354|gb|AFG63812.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162358|gb|AFG63814.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162360|gb|AFG63815.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162364|gb|AFG63817.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
gi|383162370|gb|AFG63820.1| Pinus taeda anonymous locus 2_10156_01 genomic sequence
Length = 152
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 116/149 (77%), Positives = 140/149 (93%)
Query: 383 VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 442
VKF+TPA+GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK+EG++T+ C+THLHQLHVC+
Sbjct: 1 VKFMTPATGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKIEGRSTQNCSTHLHQLHVCI 60
Query: 443 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVW 502
PSSR+KTRLLYRMSLDFA +L+H+PF+ LWRHFA++VLNEDLRLV+GQQ+RM G+NVW
Sbjct: 61 PSSRQKTRLLYRMSLDFAPLLQHIPFIHILWRHFADKVLNEDLRLVIGQQDRMVRGSNVW 120
Query: 503 NLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
NLPV YDKLG+RYR+WR+A+E G ++LPF
Sbjct: 121 NLPVSYDKLGIRYRIWRNAVEDGQQRLPF 149
>gi|308809960|ref|XP_003082289.1| chlorophyll a oxygenase (ISS) [Ostreococcus tauri]
gi|116060757|emb|CAL57235.1| chlorophyll a oxygenase (ISS) [Ostreococcus tauri]
Length = 381
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 195/341 (57%), Gaps = 72/341 (21%)
Query: 211 NTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
+++++ FWFPV F + K+ D F+ +E WV+ +
Sbjct: 73 DSKVREFWFPVMFESKFKENDDEFEFNLLDEMWVLRK----------------------- 109
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGD-EPPTAT 328
G EY CE S + + +K +G++ +WPG E PT
Sbjct: 110 ----------LTGSEYV----CESKKSRRTLSTGVK-------DGLVMVWPGTCEAPTEQ 148
Query: 329 IPC-LLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
+P PPSG+ IHAE++++ +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP++VKF
Sbjct: 149 LPSHFAPPSGYTIHAELIIDDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNMVKFA 208
Query: 387 TP----------------ASG-LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL------ 423
+ A+G +G W PYPIDM+F PCMV S IG+++ G +
Sbjct: 209 SSKLRKSGDGWHDMGNFLANGKSEGSWKPYPIDMKFLAPCMVDSHIGLAQAGAVGSGAQF 268
Query: 424 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
EG +C HLHQLHVCLPS+ +TRLLYRMSLDFA+ +++P ++ +W A QVL
Sbjct: 269 KEGVTADECPKHLHQLHVCLPSAPGRTRLLYRMSLDFANWAQYIPGIEMIWTEMANQVLG 328
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 523
EDLRLV+GQQ+RM G VW PV YDKLG+ YR WR+ +E
Sbjct: 329 EDLRLVVGQQDRMQRGGRVWAHPVAYDKLGLHYRRWRNVME 369
>gi|424513736|emb|CCO66358.1| chlorophyllide a oxygenase [Bathycoccus prasinos]
Length = 421
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 193/359 (53%), Gaps = 79/359 (22%)
Query: 211 NTRLKNFWFPVAFSTDLKD--------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
++ L+NFW+PV F + L+ T+V F E WVI R +D G ++ C ++
Sbjct: 98 SSALRNFWYPVTFVSKLEKAIEEVGDAKTVVECTFFGEKWVIKRRQDFETGEMKWVCMNK 157
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGD 322
++EG + LP Q+G+ +WPG
Sbjct: 158 --------MDEGNV------------------------------LPSQVQDGLFMVWPGK 179
Query: 323 EPPTATIP-CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
P+ IP PPSG+ +HAE+V+E +P++ LL++NLLDLAHAPFTHT TFAKGW VP
Sbjct: 180 AKPSEEIPEWFKPPSGYTVHAELVIENVPVDAALLMENLLDLAHAPFTHTGTFAKGWGVP 239
Query: 381 SLVKFLT-----PASG-------------------LQGYWDPYPIDMEFRPPCMVLSTIG 416
++V+F T P G +G W PYPIDM+F PCMV S IG
Sbjct: 240 NMVEFATKQLRKPGDGWHDMATFLSGRSGGGAGYSAEGSWKPYPIDMKFITPCMVDSHIG 299
Query: 417 ISKPGKL-------EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 469
+++PG EG C HLHQLHVC+P KTRLLYRMSLDFA K VP +
Sbjct: 300 MAQPGAAGAGAQFKEGDTCTSCEKHLHQLHVCVPQEEGKTRLLYRMSLDFAQWAKWVPGI 359
Query: 470 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 528
Q +W A QVL EDLRLV GQQ+RMN G VW PV YDK+G+ YR WR+ + K +Q
Sbjct: 360 QLVWMEMANQVLGEDLRLVEGQQDRMNRGGRVWANPVQYDKIGLVYRNWRNHVVKQEQQ 418
>gi|413944185|gb|AFW76834.1| hypothetical protein ZEAMMB73_287624 [Zea mays]
Length = 445
Score = 256 bits (654), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/137 (89%), Positives = 130/137 (94%)
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
E WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++
Sbjct: 293 EQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKM 352
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNL 359
NV+I+SLPCFEQEGMIWIWPGD+PP ATIP LLPPSGF +HAEIVMELP+EH LLLDNL
Sbjct: 353 LNVRIQSLPCFEQEGMIWIWPGDDPPKATIPSLLPPSGFIVHAEIVMELPVEHVLLLDNL 412
Query: 360 LDLAHAPFTHTSTFAKG 376
LDLAHAPFTHTSTFAKG
Sbjct: 413 LDLAHAPFTHTSTFAKG 429
>gi|255078366|ref|XP_002502763.1| chlorophyll a oxygenase [Micromonas sp. RCC299]
gi|226518029|gb|ACO64021.1| chlorophyll a oxygenase [Micromonas sp. RCC299]
Length = 345
Score = 254 bits (650), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 191/337 (56%), Gaps = 50/337 (14%)
Query: 214 LKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
++NFW+PV F + L K D F F E W + R + + A C + S+
Sbjct: 20 IRNFWYPVHFWSKLTKGDASPDFPLFGEEWTLVRTDAAGVAAARASIAFPGCD-EMASIG 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+G GW C + + LP ++G++ +WPG P A +P
Sbjct: 79 DG-------GW------VCRSVADPAMH------LPIGVKDGLVMVWPGSCKPDAALPGT 119
Query: 333 L-PPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP-- 388
PP G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 120 FKPPEGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTARL 179
Query: 389 ----------ASGLQ--------GYWDPYPIDMEFRPPCMVLSTIGISKPGKL------- 423
A+GL G W+PYPIDM+F PCMV S IG+S+ G
Sbjct: 180 RKPGDGWHDMANGLNLSALGGQSGSWNPYPIDMKFVVPCMVDSHIGMSQAGAAGGGAQFE 239
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 483
EG +CA HLHQLHVC+PS+ +TRLLYRMSLDFA K VP ++ +W A QVL E
Sbjct: 240 EGVQCAECANHLHQLHVCVPSTPGRTRLLYRMSLDFAGWAKWVPGIELVWTEMANQVLGE 299
Query: 484 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 520
DLRLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 300 DLRLVTGQQDRMQRGGRVWAHPVAYDKLGLVYRRWRN 336
>gi|238767624|dbj|BAH66651.1| chlorophyllide a oxygenase [Micromonas pusilla]
Length = 324
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 189/335 (56%), Gaps = 50/335 (14%)
Query: 216 NFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
NFW+PV F + L K D F F E W + R + + A C + S+ +G
Sbjct: 1 NFWYPVHFWSKLTKGDASPDFPLFGEEWTLVRTDAAGVAAARASIAFPGCD-EMASIGDG 59
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL- 333
C + P+T L P ++G++ +WPG P A +P
Sbjct: 60 GWVC-----------RSVADPATHL--------PIGVKDGLVMVWPGSCKPDAALPGTFK 100
Query: 334 PPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP---- 388
PP G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 101 PPEGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTARLRK 160
Query: 389 --------ASGLQ--------GYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EG 425
A+GL G W+PYPIDM+F PCMV S IG+S+ G EG
Sbjct: 161 PGDGWHDMANGLNLAALGGQSGSWNPYPIDMKFVVPCMVDSHIGMSQAGAAGGGAQFEEG 220
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
+CA HLHQLHVC+PS+ +TRLLYRMSLDFA K VP ++ +W A QVL EDL
Sbjct: 221 VQCAECANHLHQLHVCVPSTPGRTRLLYRMSLDFAGWAKWVPGIELVWTEMANQVLGEDL 280
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 520
RLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 281 RLVTGQQDRMQRGGRVWAHPVAYDKLGLVYRRWRN 315
>gi|238767618|dbj|BAH66648.1| chlorophyllide a oxygenase [Mantoniella squamata]
Length = 329
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/265 (50%), Positives = 167/265 (63%), Gaps = 27/265 (10%)
Query: 288 DGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL-PPSGFEIHAEIVM 346
DG + ST + LP Q+G++ +WPG P A +P PP G+ +HAE+++
Sbjct: 57 DGWVCRSKSTTETGTPVSHLPIGLQDGLVMVWPGTCKPEAKLPTTFKPPEGYTVHAELII 116
Query: 347 E-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP------------ASGL- 392
E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T A+GL
Sbjct: 117 EDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPNFVEFVTSKMRKPGDGWHDMATGLK 176
Query: 393 -----QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-------EGQNTRQCATHLHQLHV 440
QG W+PYPIDM+F PCMV S IG+S+ G EG +CA HLHQLHV
Sbjct: 177 GLGSQQGSWNPYPIDMKFVTPCMVDSHIGMSQAGAAGGGAQFEEGVQCVECANHLHQLHV 236
Query: 441 CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN 500
C PS +TRLLYRMSLDFA K+VP ++ +W A QVL EDLRLV GQQ+RM G
Sbjct: 237 CCPSKPGRTRLLYRMSLDFAGWAKYVPGIELVWTEMANQVLGEDLRLVTGQQDRMARGGR 296
Query: 501 VWNLPVGYDKLGVRYRLWRDALEKG 525
VW PV YDKLG+ YR WR+ + G
Sbjct: 297 VWAHPVAYDKLGLVYRRWRNMVVDG 321
>gi|238767616|dbj|BAH66647.1| chlorophyllide a oxygenase [Dolichomastix tenuilepis]
Length = 315
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 156/241 (64%), Gaps = 22/241 (9%)
Query: 305 KSLPCFEQEGMIWIWPGDEPPTATIP-CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDL 362
+ LP Q+G++ +WPG P +P PP G+ +HAE+V+E +P EHGLL++NLLDL
Sbjct: 47 QELPVGVQDGLVMVWPGMAAPAEELPKQFAPPEGYIVHAELVVETVPTEHGLLIENLLDL 106
Query: 363 AHAPFTHTSTFAKGWSVPSLVKFL-------------TPASGLQGYWDPYPIDMEFRPPC 409
AHAPFTHT TFAKGW VP LVKF+ T G QG W+PYPIDM F PC
Sbjct: 107 AHAPFTHTGTFAKGWGVPDLVKFVARKNQPEGWHDIATFLKGAQGSWNPYPIDMSFEAPC 166
Query: 410 MVLSTIGISKPGKL-------EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASV 462
MVLS IG+++ G + G C HLHQLH+C+P KTRLLYRM+LDFA
Sbjct: 167 MVLSYIGLAQAGAVGGGAQFERGSRASDCENHLHQLHICVPRKGGKTRLLYRMALDFAGW 226
Query: 463 LKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 522
+HVP M +WR A QVL+EDLRLV+GQQ+RM G VW PV YD+ + YR WR+++
Sbjct: 227 ARHVPGMHNVWREMANQVLDEDLRLVVGQQDRMERGGRVWGHPVAYDRCALSYRRWRNSV 286
Query: 523 E 523
E
Sbjct: 287 E 287
>gi|413944184|gb|AFW76833.1| hypothetical protein ZEAMMB73_287624 [Zea mays]
Length = 467
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/176 (72%), Positives = 138/176 (78%), Gaps = 14/176 (7%)
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
E WVIFRGKDG PGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST++
Sbjct: 293 EQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTKM 352
Query: 300 RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---------IVMELPI 350
NV+I+SLPCFEQEGMIWIWPGD+PP ATIP LLPPSGF +HAE IVMELP+
Sbjct: 353 LNVRIQSLPCFEQEGMIWIWPGDDPPKATIPSLLPPSGFIVHAERCVLLIIQQIVMELPV 412
Query: 351 EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFR 406
EH LLLDNLLDLAHAPFTHTSTFAKG + L W P ++ + R
Sbjct: 413 EHVLLLDNLLDLAHAPFTHTSTFAKGLECSKFGEVLNTC-----IWAPRVLNEDLR 463
>gi|145352978|ref|XP_001420810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581045|gb|ABO99103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/223 (54%), Positives = 157/223 (70%), Gaps = 11/223 (4%)
Query: 312 QEGMIWIWPG-DEPPTATIPC-LLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFT 368
++G++ +WP + PT +P P G+ IHAE+++E +P+EHGLL++NLLDLAHAPFT
Sbjct: 1 RDGLVMVWPSMNCGPTEELPSHFAAPEGYTIHAELIIEDVPVEHGLLMENLLDLAHAPFT 60
Query: 369 HTSTFAKGWSVPSLVKFLTPASGLQG-YWDPYPIDMEFRPPCMVLSTIGISKPGKL---- 423
HT TFAKGW VP++VKF + G W PYPIDM+F PCMV S IG+++ G +
Sbjct: 61 HTGTFAKGWGVPNMVKFASRKLRKDGDGWKPYPIDMKFLAPCMVDSHIGLAQAGAVGKGA 120
Query: 424 ---EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
EG + +C HLHQLHVCLPS+ TRLLYRMSLDFAS ++VP ++Y+W A QV
Sbjct: 121 QFKEGVSALECEKHLHQLHVCLPSTPGHTRLLYRMSLDFASWAQYVPGIEYIWTEMANQV 180
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 523
L EDLRLV GQQ+RM GA VW PV YDKLG+ YR WR+ ++
Sbjct: 181 LGEDLRLVTGQQDRMQRGARVWAHPVAYDKLGLHYRRWRNVID 223
>gi|303283166|ref|XP_003060874.1| chlorophyll a oxygenase [Micromonas pusilla CCMP1545]
gi|226457225|gb|EEH54524.1| chlorophyll a oxygenase [Micromonas pusilla CCMP1545]
Length = 390
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 187/338 (55%), Gaps = 51/338 (15%)
Query: 214 LKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
++N+W+P+ F + L K D F F E W + + A A +G
Sbjct: 47 IRNYWYPIHFISKLNKGDAATSFVLFGERWEL---------VADDDAAVAAAKTAVGVFG 97
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+ H DG ++ + + R+ + LP Q+G++ P A
Sbjct: 98 PEYAETQAH----LVDGAAQRW-TCRSRDDATRFLPIGLQDGLV------MPDVALPTTF 146
Query: 333 LPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP--- 388
PP+G+ HAE+++E +P+EHGLL++NLLDLAHAPFTHT TFAKGW VP+ V+F+T
Sbjct: 147 TPPAGYTTHAELIIEDVPVEHGLLMENLLDLAHAPFTHTGTFAKGWGVPTFVEFVTSKLR 206
Query: 389 ---------ASGL----------QGYWDPYPIDMEFRPPCMVLSTIGISKPGKL------ 423
A GL QG W+PYPIDM+F PCMV S IG+S+ G
Sbjct: 207 REGDGWQDMARGLTREGIGLGSQQGSWNPYPIDMKFVTPCMVDSHIGMSQAGAAGKGAQF 266
Query: 424 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
EG +C+ HLHQLHVC+PS +TRLLYRM+LDFA K+VP ++ +W A QVL
Sbjct: 267 EEGVQCAECSNHLHQLHVCVPSEPGRTRLLYRMALDFAGWAKYVPGIELVWTEMANQVLG 326
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 520
EDLRLV GQQ+RM G VW PV YDKLG+ YR WR+
Sbjct: 327 EDLRLVTGQQDRMRRGGRVWAHPVAYDKLGLVYRRWRN 364
>gi|414878607|tpg|DAA55738.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 238
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 143/204 (70%), Gaps = 21/204 (10%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARV 148
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARV 148
Query: 149 ATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------VKGKLPRKSL 201
++ALDKLA+ME LV+ T P++S S K K PR+ L
Sbjct: 149 SSALDKLAHMETLVS-----------APSTAEPPTSSSLSATASSTARVRAKNKQPRRRL 197
Query: 202 NVSGPVQPYNTRLKNFWFPVAFST 225
+VSGPV+PYN LKNFW+PVAFS
Sbjct: 198 DVSGPVKPYNPSLKNFWYPVAFSA 221
>gi|414878606|tpg|DAA55737.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 238
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 143/204 (70%), Gaps = 21/204 (10%)
Query: 30 GGFRVFALFGEEGGLVDKKSAWSTLFDVEDPRSKVPQCKGKFLDVNQALEVARYDIQYCD 89
GG +V+A+ E+G + + LF V+DP + P KFLDVN+ALEV R+DIQYCD
Sbjct: 31 GGIKVYAVLREDGAEFARNNNLEALFQVDDPGPRAPV--KKFLDVNEALEVVRFDIQYCD 88
Query: 90 WRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEDLAQAH-RQVHISEARV 148
WRARQD+LTIMLLH KVVEVLNPLAR++KSIGT++KELAELQ++L +AH +QVH+SEARV
Sbjct: 89 WRARQDLLTIMLLHSKVVEVLNPLAREFKSIGTLRKELAELQQELEKAHNQQVHLSEARV 148
Query: 149 ATALDKLAYMEALVNDRLLQDRHTSGTDQTCASPSTSKQSLDI-------VKGKLPRKSL 201
++ALDKLA+ME LV+ T P++S S K K PR+ L
Sbjct: 149 SSALDKLAHMETLVS-----------APSTAEPPTSSSLSATASSTARVRAKNKQPRRRL 197
Query: 202 NVSGPVQPYNTRLKNFWFPVAFST 225
+VSGPV+PYN LKNFW+PVAFS
Sbjct: 198 DVSGPVKPYNPSLKNFWYPVAFSA 221
>gi|303277817|ref|XP_003058202.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226460859|gb|EEH58153.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 289
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 171/298 (57%), Gaps = 37/298 (12%)
Query: 232 MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC 291
M+PFD F PWV FR +DG+ GC+++ CAHRACP+ LG V EGR+QCPYHGWEY++ G+C
Sbjct: 1 MIPFDLFNVPWVAFRDQDGMAGCIKDECAHRACPISLGKVVEGRVQCPYHGWEYTSGGEC 60
Query: 292 EKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPG------------DEPPTATIPCLLPPSG 337
+KMPS + L NV + + P E++G++++W G + PP+A PPSG
Sbjct: 61 KKMPSIKNLLPNVYVDAAPIVERDGLLYVWAGVWEPERAEEILSELPPSAAT---APPSG 117
Query: 338 FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV-PSLVKFLTPASGLQGYW 396
F AE+ +++P++ +L L+D PFT T V P ++ A L+G+
Sbjct: 118 FAAMAEVTVDVPLDAPAILSRLMDENKVPFTRVDTTTLSDDVFPKVI-----AKVLRGFG 172
Query: 397 DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS 456
P P +EF P C++ STIG+ G GQ+ ++HQ HV LPS K R+LYR+S
Sbjct: 173 KPAPKRVEFTPACILDSTIGLDGVG---GQD-----WNVHQTHVVLPSRPGKARVLYRLS 224
Query: 457 LDF---ASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ-ERMNNGANVWNLPVGYDK 510
+DF A + + V +W++ AE +L E L + G + E + G ++ YD+
Sbjct: 225 VDFVVGAEIARTV--GGQVWQNLAEMILQEQLEGIRGGRFEDDSVGEQAADVSQSYDE 280
>gi|145348528|ref|XP_001418699.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578929|gb|ABO96992.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 166/315 (52%), Gaps = 32/315 (10%)
Query: 198 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
R + V G + + R ++WFPV FS +L+D D +V FD F PWV+FRG+DG GCV+
Sbjct: 55 RGARGVDGARRTRDAR--DYWFPVCFSGNLRDKDALVAFDLFNVPWVLFRGRDGEVGCVK 112
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-LRNVKIKSLPCFEQEGM 315
+ C HRACPL LG V +GR+QCPYHGWEY T+G+C KMPS L+NV L E++GM
Sbjct: 113 DECCHRACPLSLGKVVDGRVQCPYHGWEYETNGECAKMPSCSFLKNVFADELRVIERDGM 172
Query: 316 IWIWPGDEPPT------------------ATIPCLLPPS-GFEIHAEIVMELPIEHGLLL 356
I++W G+ P A P + GF AE++ ++ ++ +++
Sbjct: 173 IFVWAGESDPADFVGPEAACESWDEDVYEANEPGMFTTGEGFVTMAEVIADVKLDSDVVV 232
Query: 357 DNLLDL---AHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS 413
+ LLD+ A +G P L GY D P + F+P C++ S
Sbjct: 233 ERLLDITERARREPVSVKNRGRGALFPVDGTRLISKVLRIGY-DAVPQSVVFKPSCVIAS 291
Query: 414 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 473
TI + +P G T + + QLHVCLP+ TR+L+RM+ DF +W
Sbjct: 292 TIAL-RPRVGGGDGT---SMQVEQLHVCLPAKPGLTRVLFRMAFDFVPEGAQNAAGD-VW 346
Query: 474 RHFAEQVLNEDLRLV 488
++ A QVL E+L V
Sbjct: 347 KNLAMQVLQEELEDV 361
>gi|255071899|ref|XP_002499624.1| chlorophyllide a oxygenase [Micromonas sp. RCC299]
gi|226514886|gb|ACO60882.1| chlorophyllide a oxygenase [Micromonas sp. RCC299]
Length = 436
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 159/291 (54%), Gaps = 29/291 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+ WFPVAF+ L + TM+PFD F PWV+FR DG GC+++ CAHRACPL LG + G
Sbjct: 135 RAHWFPVAFAAGLDETTMIPFDLFNVPWVMFRDADGNAGCIKDECAHRACPLSLGKLVNG 194
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPT------ 326
+ QCPYHGWEY+T G+C KMPS + L V + + P E++G +++W G P
Sbjct: 195 KAQCPYHGWEYTTGGECVKMPSIKKMLPGVYVDAAPVVERDGFLYLWAGKWEPGIEDEVL 254
Query: 327 ATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLD-LAHAPFTHTSTF----AKGWSV 379
A P L PP GF AE+ +++P+E +L L+ T T +F AK S
Sbjct: 255 AKTPRRSLAPPQGFTPMAEVTVDIPMEAEEVLSRLMAPGGRTSRTATVSFDVVDAKRISD 314
Query: 380 PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK-PGKLEGQNTRQCATHLHQL 438
K + A+ L+G P P F P C++ ST+G+ PG ++HQ+
Sbjct: 315 SVFPKIV--ANVLRGLRKPVPRTATFLPACVLDSTVGLEDGPGDW----------NVHQM 362
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHV-PFMQYLWRHFAEQVLNEDLRLV 488
HV LP+ + RLL+R+S+DF +V + +W + A+ VL E L V
Sbjct: 363 HVVLPARPGRCRLLFRLSVDFVAVPEIARAIGGEVWANLAQMVLKEQLEGV 413
>gi|412986659|emb|CCO15085.1| iron-sulfur cluster-binding protein, Rieske family [Bathycoccus
prasinos]
Length = 448
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 160/300 (53%), Gaps = 37/300 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEGRI 276
WFPVAFS ++K + M+PFD F PWV+FR K+G GCV++ CAHRACPL LG V EG I
Sbjct: 100 WFPVAFSKNVKFNQMIPFDLFNVPWVLFRTKEGEIGCVKDECAHRACPLSLGVQVEEGHI 159
Query: 277 QCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPGDEP---PTATIP- 330
QC YHGWE++T G+C KMPS T L+ V + +L E +GM+++W GDE P P
Sbjct: 160 QCAYHGWEFTTRGECVKMPSCKTVLKGVYVDALKTVEHDGMVFVWAGDEGEEVPDEKDPR 219
Query: 331 ----------CLLPPSGFEIH-------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
L P G ++ AEI +E E +L + L L
Sbjct: 220 HPTNLYVGEKSLRAPGGGSVNGTPFLTCAEIELEFENECDVLTERLFTLTQRAVNKAKLV 279
Query: 374 -AKGWSVPSLVKFL----TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
K S+ + + A L+ W P P +++F P ++S+I I ++ G +
Sbjct: 280 EEKTGSLEKIFDLVDVSAQVAKALRWGWRPVPNEIKFVPSSALVSSIDIQ---RMYGDSI 336
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
+ +HQ+HVCLPS KTR+L+RM+LDF + + +W + A Q+L E+L V
Sbjct: 337 PR---RVHQVHVCLPSRPGKTRVLFRMALDF--LPESAMVADKVWENLARQILKEELNDV 391
>gi|308806049|ref|XP_003080336.1| chloroplast chlorophyllide a oxygenase precursor (ISS)
[Ostreococcus tauri]
gi|116058796|emb|CAL54503.1| chloroplast chlorophyllide a oxygenase precursor (ISS), partial
[Ostreococcus tauri]
Length = 327
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 156/296 (52%), Gaps = 37/296 (12%)
Query: 223 FSTDLKDD--TMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 280
FS+ L+ D VPFD F+ PWV+FRGK G GCV++ C HRACPL LG V +GRIQCPY
Sbjct: 20 FSSALRFDKGASVPFDLFDVPWVLFRGKSGDVGCVKDECCHRACPLSLGKVVDGRIQCPY 79
Query: 281 HGWEYSTDGKCEKMPSTQ-LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC-------- 331
HGWEY T G+C KMPS + L+NV SL E++GMI++W G+ P I
Sbjct: 80 HGWEYETSGECVKMPSCRFLKNVYSDSLRVIERDGMIFVWAGESDPEDFIGAGSANAGES 139
Query: 332 --------------LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH----APFTHTSTF 373
P GF AE+ ++ ++ ++L+ LLD+ P + +
Sbjct: 140 WDEDVYEAGEEAGMFTPRDGFVTMAEVTADVKVDSNIVLERLLDITERARRVPVSVKNRQ 199
Query: 374 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 433
+ K ++ L+ ++P P + F+P C++ STI + +P KL G +
Sbjct: 200 RTPYEKADATKLISKV--LRIGYEPMPQSVVFKPSCVIASTIEL-RP-KLGGAGGGK-PM 254
Query: 434 HLHQLHVCLPSSRKKTRLLYRMSLDFA-SVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
+ QLHVCLP+ TR+L+RM+ DF +H W + A QVL E+L V
Sbjct: 255 LVEQLHVCLPAKPGVTRVLFRMAFDFVPEGAQHA--AGDTWNNLAMQVLQEELEDV 308
>gi|90658395|gb|ABD93562.2| chloroplast chlorophyll a oxygenase [Capsicum annuum]
gi|90658396|gb|ABD93563.2| chloroplast chlorophyll a oxygenase [Solanum tuberosum]
Length = 99
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/99 (89%), Positives = 96/99 (96%)
Query: 282 GWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIH 341
GWEYSTDGKCEKMPST+L NVKIK+LPCFEQEGMIWIWPG++PP AT+P LLPPSGF+IH
Sbjct: 1 GWEYSTDGKCEKMPSTRLLNVKIKALPCFEQEGMIWIWPGNDPPAATLPSLLPPSGFQIH 60
Query: 342 AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
AEIVMELP+EHGLLLDNLLDLAHAPFTHTSTFAKGWSVP
Sbjct: 61 AEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 99
>gi|238767612|dbj|BAH66645.1| chlorophyllide a oxygenase [Pseudoscourfieldia marina]
Length = 151
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 109/152 (71%), Gaps = 10/152 (6%)
Query: 258 TCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEG 314
+CA RACPL LG V+E G +QCPYHGWEY G +KMPST RNVK+++L E +G
Sbjct: 1 SCAPRACPLSLGRVSEETGCVQCPYHGWEYDKSGTVKKMPSTPFARNVKVENLVVREADG 60
Query: 315 MIWIWPGDEPPTAT---IPCLLPP-SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
+IW WPG EP A IP LLP S FE HA+I +++P+EHGLL++NLLDL+HAPFTHT
Sbjct: 61 LIWAWPG-EPSRAESTPIPSLLPEGSNFEKHAQIQLDVPVEHGLLMENLLDLSHAPFTHT 119
Query: 371 STFAKGWSVPSLVKF-LTPASGL-QGYWDPYP 400
STFAKGW +P VKF L G+ G WDPYP
Sbjct: 120 STFAKGWPIPDSVKFHLDSGMGIVSGAWDPYP 151
>gi|17232499|ref|NP_489047.1| hypothetical protein alr5007 [Nostoc sp. PCC 7120]
gi|17134145|dbj|BAB76706.1| alr5007 [Nostoc sp. PCC 7120]
Length = 450
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 44/372 (11%)
Query: 193 KGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP 252
+G++ + N S ++ W+P+ F D + F ++EP+V+FR +DG
Sbjct: 7 QGEIKQAIFNSSMSENNQEFNWRHCWYPITFLQDFPKELPYSFSLYDEPFVLFRNQDGKL 66
Query: 253 GCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSL 307
GC+ + C HRA L G + +G+I+C YHGW++ TDG+C +P +T +N ++S
Sbjct: 67 GCLPDICPHRAAKLSDGQIIDGKIECLYHGWQFGTDGQCLHIPQLPKEATIPKNACVQSF 126
Query: 308 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 362
E++G++W+W G DE IP L P + + + +P + L++N +D
Sbjct: 127 AIVERQGIVWMWAGEADAADETLIPAIPELDKPEF--VTTDFMCNIPYDQNTLIENAIDP 184
Query: 363 AHAPFTHTSTFA-KGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVL 412
AH P +H T + ++P ++ + A +QG Y I++ F P +V+
Sbjct: 185 AHVPISHNGTLGNRAEALPLEMEII--AKSVQGICGRYRNVSSSLSPWININFVAPNLVM 242
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQY 471
I I++ E R A + +P + + R+L+R +F+ LK P ++
Sbjct: 243 LYIPINE----ERGWYRGAAAY------SIPLGKNQCRVLFRAFQNFSQWRLKLTP--RW 290
Query: 472 LWRHFAEQVLNEDLRLVLGQQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAK 527
L + ++VL +D++ GQQ ER+ LP+ D V YR W L+K
Sbjct: 291 LEHWYRQKVLQQDMQQAAGQQKHIERLIKSPRELYLPLKTSDLFPVEYRKW---LDKYGS 347
Query: 528 QLPFMKPMQTRK 539
LPF + T K
Sbjct: 348 SLPFYQGYTTCK 359
>gi|440790930|gb|ELR12190.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 499
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 169/371 (45%), Gaps = 72/371 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTMVP---------FDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 264
++N W+PVAF+++L F +P V+FR + G CVQ+ C+HR+
Sbjct: 10 MRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHRSA 69
Query: 265 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWP 320
PL +G+V +GR++C ++ + GKCE +PS + + + P E ++W+WP
Sbjct: 70 PLSVGTVRDGRLEC-----KFGSGGKCESIPSEPTTRPGKPFCVYAYPTTEVYDLVWVWP 124
Query: 321 GDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
GD P +P F+ + + + + IEHGL ++N+LD +H PFTH T
Sbjct: 125 GD--PEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIEHGLFIENILDPSHLPFTHDGTL 182
Query: 374 AKGWSVPSL-VKFL-------TPAS-----------------GL-QGYWD-----PYPID 402
+K + V+ L PA GL +G++ +P D
Sbjct: 183 SKRAKADEMKVEMLFDNVFGQAPAPRSSADDHQTDAHSHFTLGLPEGFYGMQAQAVWPAD 242
Query: 403 -------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 455
F+ PC+V + S K + + QLH C+P S + R+
Sbjct: 243 ASRPAQRFTFQTPCVVRLDLQTSTTKKRPDGSY----PTMIQLHFCVPVSPTRFRVNTIF 298
Query: 456 SLDFASVLKH---VPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 512
+FA+ P +L R +A++++++D+ L+ GQ + N A WN V DK+
Sbjct: 299 FRNFATKFTASGGFPLGSHLNRWYADKIMDQDVELLTGQMVNLLNAAKPWNTVVRADKIA 358
Query: 513 VRYRLWRDALE 523
RYR WRD E
Sbjct: 359 ARYRRWRDQAE 369
>gi|427730555|ref|YP_007076792.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427366474|gb|AFY49195.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 453
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 164/348 (47%), Gaps = 39/348 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+P+ F DL + F + + V+FR DG GC+ + C HRA L G + +G
Sbjct: 29 KNCWYPITFLQDLPKNRPYSFSLYNQSLVLFRTPDGKLGCLTDICPHRAAKLSDGQIIDG 88
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
RI+C YHGW++ TDGKC +P +N +KS E +G++WIW G+
Sbjct: 89 RIECLYHGWQFGTDGKCLHIPQLAHDAKIPQNTCVKSYVVVEHQGIVWIWAGEAAAVDEK 148
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT-HTSTFAKGWSVPSLV 383
IP LL P F + + V E+P + ++N LD AH P H S + + P +
Sbjct: 149 RIPNLLEFDDPKFFSL--DYVFEVPYDETYFIENALDPAHVPINHHGSEMNRQDAQPLEI 206
Query: 384 KFL-TPASGLQGYW------DPYPIDMEFRPP-CMVLSTIGISKPGKLEGQNTRQCATHL 435
+ L T +G++G + D + ++F P +V + KPG G A +L
Sbjct: 207 EVLATSITGIKGRYRDTRTPDAKWVKLDFLAPNSVVYGFYDLPKPGFHSG-----LALYL 261
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 495
LP + + R+L R +F++ K+ ++L F +V+ ED ++ G QE++
Sbjct: 262 ------LPKNPTQCRVLARFFQNFSTRRKNQLEPRWLSHLFRNRVVEEDRYMIKGVQEQV 315
Query: 496 NNGANVWN---LPVGY-DKLGVRYRLWRDALEKGAKQLPFMKPMQTRK 539
LP+ D L + YR W L+K LP+ + T K
Sbjct: 316 ERSGQSLKELYLPLKTSDMLVIEYRKW---LDKYGASLPYYQGYSTSK 360
>gi|290978282|ref|XP_002671865.1| predicted protein [Naegleria gruberi]
gi|284085437|gb|EFC39121.1| predicted protein [Naegleria gruberi]
Length = 563
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 167/391 (42%), Gaps = 68/391 (17%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
N + FW+PVA STD+K + PF EP V++R DG C + C HR+ L
Sbjct: 170 NMDMSLFWYPVALSTDIKINDKKPFVVKLLGEPLVLYRTSDGQVTCTLDLCPHRSAKLST 229
Query: 269 GSVNE--GR--IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQE-----GMIW 317
G + E G+ ++C YHGW + DG+C ++PS +K K++ C ++ GMIW
Sbjct: 230 GEITEFEGKRSLECAYHGWRFEKDGQCVRIPSVSSERMKGLCKTIKCQSKQVHECCGMIW 289
Query: 318 IWPGDEPPTAT--IPCLLPPSGF--------EIHAEIVMELPIEHGLLLDNLLDLAHAPF 367
+WP D+ + IP L + I E ++P + L+L+NLLD AH F
Sbjct: 290 VWPNDKVKSDINQIPIELFREEYLTEDSTKPYIMLEKSRDIPCNYSLVLENLLDFAHLDF 349
Query: 368 THTSTFAKGWSVPSLVKFL-----TPASG------------------------------- 391
TH T K + L TPA
Sbjct: 350 THDGTLGKRSRATQVKTQLILSKDTPAQDDSVRSKLPTEMHFDKTIHSDSFTYRVTKPEY 409
Query: 392 --LQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 449
++G + F PPC V + +EG + + + Q+ +P+ + +
Sbjct: 410 QKVKGVKREFGNITSFIPPCFV----RLDNTDYIEGGDLKNAGPRISQIFCMIPTGQNEH 465
Query: 450 RLLYRM--SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN-NGANVWNLPV 506
R+++R ++ + L +P++ A+ +L++DL L+ G E + NGA V++ V
Sbjct: 466 RIIFRFYSTIPVLNYLNKIPYIYSKLLQSADTILDQDLELLFGISENVTKNGAKVFSKIV 525
Query: 507 GYDKLGVRYRLWRDALEKGAKQLPFMKPMQT 537
D YR W + K K + K +T
Sbjct: 526 NADAPIKAYRDWEAKMLKQNKNGIYFKGWET 556
>gi|238767614|dbj|BAH66646.1| chlorophyllide a oxygenase [Pseudoscourfieldia marina]
Length = 135
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 2/117 (1%)
Query: 408 PCMVLSTIGISKPGKLE-GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 466
PC V+STIG++ PG++ G C HL Q+H C+P+S KTRLLY M LDF +K++
Sbjct: 3 PCFVISTIGLAAPGEIRRGVKAEDCDKHLRQVHACVPASEGKTRLLYLMHLDFWPWMKNL 62
Query: 467 PFMQYLWRHFAEQVLNEDLRLVLGQQERM-NNGANVWNLPVGYDKLGVRYRLWRDAL 522
P M+ LW A QVL EDLRLVLGQQERM + +VW PV YDK+GVRYR WR+ L
Sbjct: 63 PLMEELWLSQANQVLGEDLRLVLGQQERMLKSQGDVWGAPVAYDKVGVRYRRWRNQL 119
>gi|332712318|ref|ZP_08432246.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332349124|gb|EGJ28736.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 452
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 173/348 (49%), Gaps = 46/348 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+PV F DL D F ++EP V+FR +DG C+ N C HRA L G + +G+I+
Sbjct: 32 WYPVTFVQDLPTDRPYSFSLYDEPLVLFRNQDGKLACLTNRCPHRAAKLSEGQIIDGKIE 91
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPC------FEQEGMIWIWPG-----DEPP 325
C YHGW++ DG+C +P QL + KI + C E++G++W+W G D+
Sbjct: 92 CLYHGWQFGRDGQCLHIP--QLPEDAKIPAKACVQSFTVVERQGIVWVWMGKPEAADQEG 149
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 384
T+ L P+ ++ +++LP + ++N LD +H +H T ++ ++ P ++
Sbjct: 150 IPTVADLDNPT--VASSDYMIDLPYDQTYFIENALDPSHLYISHEGTLSSRKYAQPLEME 207
Query: 385 FLTPAS-GLQGYW-------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
L ++ G++G + P+ ++++F P +V S G+ ++ R L+
Sbjct: 208 VLESSTFGIRGRYRKTRQKNSPW-VNLDFVAPNLVTYR---SSSGE---KSVRIGGAALY 260
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ--- 492
LP + K R++ R + ++ LK P W + ++ L EDL LV+GQQ
Sbjct: 261 ----SLPLGKGKCRIIIRNYNNHSTWKLKLQPRWMEHW--YRDKFLEEDLPLVVGQQAEV 314
Query: 493 ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMKPMQTRK 539
ER+ N L + D L + YR W L+K LPF + TRK
Sbjct: 315 ERLGTSLNSLYLQLKTSDMLLIEYRKW---LDKFGTSLPFYQGYSTRK 359
>gi|186682267|ref|YP_001865463.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464719|gb|ACC80520.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 451
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 169/358 (47%), Gaps = 48/358 (13%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 267
Q +N R W+PV F DL + F +EEP+V+F+ ++G C+ + C+HRA L
Sbjct: 24 QEFNWRQS--WYPVCFLQDLPTNRPYTFSLYEEPFVLFKDQNGQLICLTDRCSHRAARLS 81
Query: 268 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGD 322
G + +G+I+C YHGW++ +G+C +P N + S E++G+IW+W G
Sbjct: 82 DGQIIDGKIECSYHGWQFGNNGQCLHIPQLASDAKIPVNACVPSFKVLERQGIIWMWAG- 140
Query: 323 EPPTA------TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
E TA ++P P F + + V +LP + ++N++D AH P +H
Sbjct: 141 EAETAIDELIPSLPDWNKPECFNL--DYVRDLPYDQSYFIENIIDPAHVPISHDGIIGSR 198
Query: 377 WSVPSLVKFLTPAS--GLQGYWD-------PYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
+L + ++ G++G W P+ I ++F P ++L + GK G
Sbjct: 199 EDAQALDIEVIESNIQGIKGRWQRTRTPNLPW-ISLDFIAPNLILYKFANVQQGKFWG-- 255
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYR-MSLDFASVLKHV-PFMQYLWRHFAEQVLNEDL 485
T L+ +P + + R+L R S F K + P++ ++ ++L DL
Sbjct: 256 -----TALYS----IPLGKNRCRILIRNYSNSFPQKTKLMPPWLDHIL--IRNKILEGDL 304
Query: 486 RLVLGQQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMKPMQTRK 539
+LV+ Q+ ER+ LP+ D L V YR W L+K LPF + T K
Sbjct: 305 QLVVEQKAQIERLKKNLKEVYLPLKTSDTLVVEYRKW---LDKFGSSLPFYQGYSTSK 359
>gi|254413280|ref|ZP_05027051.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179900|gb|EDX74893.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 449
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 166/352 (47%), Gaps = 50/352 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+P+ F D D F ++EP+VIF+ ++ + C+ + C HRA L G + +G
Sbjct: 29 RNCWYPICFRQDFAKDRPYGFSLYDEPFVIFKHQEELI-CLTDRCPHRAAKLSDGQLIDG 87
Query: 275 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 324
+++C YHGW++ +G+C +P T N ++S E++G+IWIWPG DE
Sbjct: 88 KLECLYHGWQFGHEGQCLHIPQLSADGTIPVNANVRSHKVVERQGLIWIWPGAAELADEQ 147
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSLV 383
TIP L P GF +H++ + E+P + +L+++LD AH TH + + P +
Sbjct: 148 AIPTIPQLDQP-GF-VHSDKLTEVPCDISYVLEHMLDPAHIHITHHGNQGDRAKAQPLEM 205
Query: 384 KFL-TPASGLQGY----------WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 432
+ L + +G +G W I +F P + I GQ A
Sbjct: 206 EILESSVNGFRGQSRNTREPNSTW----IKFDFIAPSLAHFYFSIPDKDWFFGQ-----A 256
Query: 433 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-QVLNEDLRLVLGQ 491
+L P S+ K R+L R +F V + V M W H + ++L +D+ ++LGQ
Sbjct: 257 FYL------FPLSKGKCRILSRTYRNF--VTQPVKLMPRWWTHLKQNKILAQDISILLGQ 308
Query: 492 Q---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMKPMQTRK 539
Q ER+ P+ D + YR W L++ LP+ + T K
Sbjct: 309 QHEVERLGEPVKQVYSPIPTCDTFAMEYRKW---LDRVGASLPYYRGYLTSK 357
>gi|357137389|ref|XP_003570283.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 539
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 30/298 (10%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
K W+P+ S ++ DD +P F+ V++R DG+ C ++ C HR L G + +G
Sbjct: 86 KEEWYPLYLSKEVPDDAALPLTVFDRQLVLYRDADGVLRCHEDRCPHRLAKLSEGQLVDG 145
Query: 275 RIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 327
+++C YHGW++ +GKC K+P + RN ++ + +G++W+W P + P ++
Sbjct: 146 KLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARNYEVRDSQGVVWVWMSPSNPPDSS 205
Query: 328 TIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 383
+P P +GF V ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 206 KLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLA 264
Query: 384 KFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQCATHL 435
+T + G GYW P+ + F PC++ +T+ + K GK QC
Sbjct: 265 FEVTERTRRGFAGYWARERAPHLRSLLRFEAPCVLTNTLEFVDKDGK------EQC---F 315
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
+C P+ + K LL R +S L V Q+ + A +V +D+ + Q E
Sbjct: 316 SAQFLCRPAGQGKAMLLVRFGSTASSPLMKV-LPQWYFHQNACKVFEQDMGFLSSQNE 372
>gi|425455977|ref|ZP_18835688.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
gi|389803035|emb|CCI17994.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/334 (31%), Positives = 159/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR ++G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + V++LP E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDLPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSMPNPHWYAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|290975135|ref|XP_002670299.1| predicted protein [Naegleria gruberi]
gi|284083856|gb|EFC37555.1| predicted protein [Naegleria gruberi]
Length = 443
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 161/401 (40%), Gaps = 71/401 (17%)
Query: 195 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTD--LKDDTMVPFDCFEEPWVIFRGKDGIP 252
K P + V N + FW+PVA S D + D F EP ++R DG
Sbjct: 41 KFPNDTFKTKSDVT--NLEMTLFWYPVALSKDVSITDSKPKTIKLFGEPLALYRTSDGNI 98
Query: 253 GCVQNTCAHRACPLHLGSVNEGR----IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKS 306
CV++ C HR+ L G V E ++C YHGW + +G+C ++PS +K +
Sbjct: 99 TCVKDLCPHRSAKLSTGQVTEFEGKRSLECAYHGWRFEKEGQCVRIPSVSSERMKGLCST 158
Query: 307 LPCFEQE-----GMIWIWPGDE--PPTATIPCLL--------PPSGFEIHAEIVMELPIE 351
+ C ++ G+IW++P D+ IP L S E+ E +LP
Sbjct: 159 IKCQAKQVHECCGLIWVFPNDKVKADINQIPLELFREEFLTDDSSKLEVLIENTRDLPCH 218
Query: 352 HGLLLDNLLDLAHAPFTHTSTFAK-------------GWSVPS----------------- 381
+ +L+NLLD AH FTH T K +PS
Sbjct: 219 YSFVLENLLDPAHLDFTHDGTIGKRSQATQIQSQLVISKDIPSDNPSRRLIPKEMQYDQS 278
Query: 382 ------LVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+F P + G + + + F PPC V + + +
Sbjct: 279 IHQDSFTYRFTKPEFKKIPGLKSEFMVQLSFIPPCFV-------RMDTTDYIANERSGPR 331
Query: 435 LHQLHVCLPSSRKKTRLLYRM--SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ 492
+ Q+ +P+ + +++++ SL + L +PF++ + + + ++DL L+ G
Sbjct: 332 MSQVFCLIPTGEGEVKVIFKFYSSLSILNFLNKIPFIRNKFAKTVDMIFDQDLELLAGVY 391
Query: 493 ERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
E +NNG V++ V D YR W + K+ F K
Sbjct: 392 ENVNNGVKVFSKIVNADAPIKGYREWEAKMLNVNKKGIFFK 432
>gi|425447801|ref|ZP_18827783.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
gi|389731630|emb|CCI04395.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
Length = 446
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR ++G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + V++LP E G LL+NL D AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDLPYEQGYLLENLFDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSGNPQESWKYLDFIAPNLVHYRFSMPNPHWYAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425460637|ref|ZP_18840118.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
gi|389826681|emb|CCI22681.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
Length = 446
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|73539609|ref|YP_299976.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|159464211|ref|XP_001690335.1| hypothetical protein CHLREDRAFT_114479 [Chlamydomonas reinhardtii]
gi|72122946|gb|AAZ65132.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|158279835|gb|EDP05594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 349
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 41/336 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ V +STD D +VPF +EP I+R DG +++ C HR PL +G
Sbjct: 3 LRNCWYMVGWSTDFTADAIVPFTVMDEPLAIYRKTDGSLAALEDRCCHRLAPLSVGRKEG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPG--DEPPTATI 329
++C YHG +++ DG+C ++P + V +++ P E+ G W+W G ++ A +
Sbjct: 63 DELRCMYHGLKFAADGRCTEVPGQDRISPRVCVRAYPIVEKHGAAWVWMGEAEKADEALV 122
Query: 330 PCLLPPSGFEIHAEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P ++ P E + ++ + L+ DNLLDL+HAPF H +TF G S P +K +
Sbjct: 123 PPIIGPDNAEWAMQCSTFDMDVNAELISDNLLDLSHAPFVHEATF--GASDPVALKMMKE 180
Query: 389 ASGLQG---------------------YWDPYPIDME----FRPPCMVLSTIGISKPGKL 423
+ +G Y+ P D F P + + TI +PG L
Sbjct: 181 SETKRGVTQLERGVLADRWQLGRQSNPYFGARPCDDHVVSLFLVPGVFILTITSYEPGVL 240
Query: 424 E----GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
E G T + P S+ K+R + +F Q+ + A+
Sbjct: 241 ERSEGGDVTETPIFKRCTCQMITPISKNKSRFFF----NFGPWAAAADLKQHCF-GIADA 295
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY 515
ED R++ QQ+ ++ + + D+ VRY
Sbjct: 296 AFQEDKRIIEAQQDMIHRSPGRKFVLLPMDQPVVRY 331
>gi|166363589|ref|YP_001655862.1| dioxygenase Rieske iron-sulfur component [Microcystis aeruginosa
NIES-843]
gi|166085962|dbj|BAG00670.1| probable dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa NIES-843]
Length = 446
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 154/334 (46%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNP-YSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVMERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLV 383
IP L P+ +H + V++ P E G LL+NLLD AH +H S F +
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 384 KFL---TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
F A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425441278|ref|ZP_18821558.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
gi|389718043|emb|CCH97943.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
Length = 446
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFALPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425464229|ref|ZP_18843551.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
gi|389833823|emb|CCI21361.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
Length = 446
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 165/353 (46%), Gaps = 50/353 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRDALEKGAKQLPFMKPMQTRK 539
QQ E+ + LP+ D L + R W D + LP+ + +++
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD---RYGDSLPYYQGYTSQR 349
>gi|428311820|ref|YP_007122797.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253432|gb|AFZ19391.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 447
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 43/366 (11%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
P +L ++ + +N R W+PV F DL ++ F ++EP+V+FR +D C+
Sbjct: 13 PTATLPLAEQEEEFNWR--QCWYPVTFVQDLPENRPYSFSLYDEPFVLFRNQDKKLICLT 70
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC---EKMPSTQLRNVK--IKSLPCFE 311
+ C HRA L G + +G+I+C YHGW++ ++G+C ++P+ +K ++S E
Sbjct: 71 DRCPHRAAKLSDGQILDGKIECLYHGWQFGSEGQCLHIPQLPTDAKIPIKACVQSFKVIE 130
Query: 312 QEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 366
++GMIW+W G DE TIP L P GF ++++ + EL + +++++LD AH
Sbjct: 131 RQGMIWMWAGNAEAADEDRIPTIPKLGKP-GF-VYSDKITELSCDISYVIEHMLDPAHIH 188
Query: 367 FTHTSTFAKGWSVPSLVKFLTPAS--GLQGYW------DPYPIDMEFRPPCMVLSTIGIS 418
H L + +S G +G + D +++F P + I
Sbjct: 189 IAHHGNQGNREKAQPLEMEIIESSVEGFRGRFRETRLPDQTWRNLDFIVPSLAHLHFPIP 248
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
+ G GQ P + + R+L R +F ++ V M W H +
Sbjct: 249 EKGWFFGQA-----------FYFFPLGKGRCRILTRSYRNFVTL--PVKLMPRWWIHLKQ 295
Query: 479 -QVLNEDLRLVLGQQ---ERMNNGANVWNLPVGY-DKLGVRYRLWRDALEKGAKQLPFMK 533
++L EDL +LGQQ ER+ P+ D + YR W D + LPF +
Sbjct: 296 NKILEEDLAQLLGQQQEVERLGQTIKQVYAPIETCDTFAIAYRQWVD---RYGSSLPFYR 352
Query: 534 PMQTRK 539
T K
Sbjct: 353 GYTTSK 358
>gi|422305128|ref|ZP_16392465.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
gi|389789620|emb|CCI14428.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 154/334 (46%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFAKGWSVPSLV 383
IP L P+ +H + V++ P E G LL+NLLD AH +H S F +
Sbjct: 138 DIPIIKDLEDPNC--VHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 384 KFL---TPASGLQGYW----DPYPI--DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
F A G++ W +P ++F P +V + P G
Sbjct: 196 AFQILEVSARGIRSQWRNSCNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425448723|ref|ZP_18828567.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
gi|389764003|emb|CCI09609.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + +++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSHNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425470320|ref|ZP_18849190.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
gi|389884067|emb|CCI35571.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
Length = 446
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNP-YSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVMERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ ++ + V++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VYTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|145353812|ref|XP_001421195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581432|gb|ABO99488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 492
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 149/309 (48%), Gaps = 45/309 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-GRI 276
W+P A+ D++ D + F EP V +R K G CV + C HR PL G VNE G +
Sbjct: 36 WYPAAYVADVEKDAPLTFTLLGEPLVFWRDKSGEMRCVADRCPHRLVPLSEGRVNETGEL 95
Query: 277 QCPYHGWEYSTDGKCEKMP--------STQLRNVK--IKSLPCFEQEGMIWIWPG--DEP 324
+C YHGW ++ +GKC +P T L++ + + + P E +GM+W++P D+
Sbjct: 96 ECGYHGWTFTGEGKCTSIPQIEQGTGLETALKSPRSCVAAYPTKEAQGMLWVYPTSMDKA 155
Query: 325 PTATIPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
P AT+P L L P + + +I +LP++ LL+N++D++H PFTH ++ K +
Sbjct: 156 P-ATLPDLPLIPEYDDPECVCQDIFRDLPMDWATLLENVMDVSHVPFTHHNSVGKRENAT 214
Query: 381 SLVKFLTPASGL-----QGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNT 428
+ L A+G+ +G W P EF+ P ++ T+ K E T
Sbjct: 215 PVNLELASAAGVTANGFEGIWKEGPRKGKYGSQYTEFKAPTLMRHTL------KTEAFTT 268
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRHFAEQVLNEDLR 486
+P++ + RL+ R F S L F Y + H + + ED +
Sbjct: 269 LTVV-------YAVPTTPGRCRLMARFPFIFKSALPRFFFGLYPQWFSHTNQNAILEDDQ 321
Query: 487 LVLGQQERM 495
+ L +QER+
Sbjct: 322 IFLHKQERL 330
>gi|440753320|ref|ZP_20932523.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|440177813|gb|ELP57086.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
Length = 446
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNPY-SFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + +++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLVRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|425437604|ref|ZP_18818019.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
gi|389677378|emb|CCH93660.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
Length = 446
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 157/334 (47%), Gaps = 47/334 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+PV F D + + F + +P +IFR + G GC+ + C HR L G + G
Sbjct: 19 QNCWYPVLFVQDWQKNP-YSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAG 77
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
R++C YHGW++ TDGKC +P + RN K+KS E++G++W+W G+E +
Sbjct: 78 RLECLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKES 137
Query: 328 TIPC---LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT-STFA--KGWSVPS 381
IP L P+ +H + +++ P E G LL+NLLD AH +H S F + + P
Sbjct: 138 DIPIIKDLEDPNC--VHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPL 195
Query: 382 LVKFL-TPASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ L A G++ W P + ++F P +V + P G
Sbjct: 196 AFQILEISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPHWCAG--------- 246
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAE-QVLNEDLRLVLG 490
L + L R +RLL R +FA V QY WR H + ++L +DL L+
Sbjct: 247 LALYGISLGQGR--SRLLMRRYQNFA-----VNSRQYRWRWLEHLRQSRILEDDLPLIQS 299
Query: 491 QQ---ERMNNGANVWNLPV-GYDKLGVRYRLWRD 520
QQ E+ + LP+ D L + R W D
Sbjct: 300 QQQMVEKSRDSLQKLYLPLKSSDALVIELRQWFD 333
>gi|440790926|gb|ELR12186.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 306
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 22/182 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVP---------FDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 264
++N W+PVAF+++L F +P V+FR + G CVQ+ C+HR+
Sbjct: 10 MRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHRSA 69
Query: 265 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWP 320
PL +G+V +GR++C YHGW++ + GKCE +PS + + + P E ++W+WP
Sbjct: 70 PLSVGTVRDGRLECKYHGWQFGSGGKCESIPSEPTTRPGKPFCVYAYPTTEVYDLVWVWP 129
Query: 321 GDEPPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
GD P +P F+ + + + + I HGL ++N+LD +H PFTH T
Sbjct: 130 GD--PEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIGHGLFIENILDPSHLPFTHDGTL 187
Query: 374 AK 375
+K
Sbjct: 188 SK 189
>gi|242063354|ref|XP_002452966.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
gi|241932797|gb|EES05942.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
Length = 538
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 40/303 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
K W+P+ S ++ DD +P F+ V++R +G+ C ++ C HR L G + +G
Sbjct: 85 KEEWYPLYLSKEVPDDAALPLTVFDRQLVLWRDGNGVLRCHEDRCPHRLAKLSEGQIVDG 144
Query: 275 RIQCPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 323
+++C YHGW++ +GKC K+P S RN +++ + +G++W+W D
Sbjct: 145 KLECLYHGWQFDGEGKCVKIPQLPEGAKIPRSACARNYEVR-----DSQGVVWVWVSDAN 199
Query: 324 -PPTATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWS 378
P +P P +GF V ELP +H +LL+NL+D AH P +H T AK
Sbjct: 200 PPDEGKLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKRED 258
Query: 379 VPSLVKFLTPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
L +T + G GYW P+ + + F PC++ +T+ + + T QC
Sbjct: 259 AQPLFFDVTERTPRGFAGYWGRTSTPHLRNLLRFEAPCVLTNTLEYT-----DKDGTEQC 313
Query: 432 -ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 490
+ H +C P+ + K+ LL R S L V + + A +V +D+ +
Sbjct: 314 FSAHF----LCRPAGQGKSMLLVRFGSTLRSPLAKV-LPTWYFHQNACKVFEQDMGFLSS 368
Query: 491 QQE 493
Q E
Sbjct: 369 QNE 371
>gi|293333760|ref|NP_001168313.1| hypothetical protein [Zea mays]
gi|223947409|gb|ACN27788.1| unknown [Zea mays]
gi|413939284|gb|AFW73835.1| hypothetical protein ZEAMMB73_526484 [Zea mays]
Length = 538
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 40/300 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ DD +P F+ V++R G+ C ++ C HR L G + +G+++
Sbjct: 88 WYPLYLAKEVPDDAALPLTVFDRQLVLWRDAHGVLRCHEDRCPHRLAKLSEGQIVDGKLE 147
Query: 278 CPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDE--PP 325
C YHGW++ DGKC K+P S RN +++ + +G++W+W D P
Sbjct: 148 CLYHGWQFDGDGKCVKIPQLPEGAKIPRSACARNYEVR-----DSQGVVWVWMSDANPPD 202
Query: 326 TATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPS 381
+P P +GF V ELP +H +LL+NL+D AH P +H T AK
Sbjct: 203 EGKLPWFEPYARAGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 382 LVKFLTPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQC-AT 433
L +T + G GYW P+ + + F PC++ +T+ + + QC +
Sbjct: 262 LFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFA-----DKDGREQCFSA 316
Query: 434 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
H +C P+ + K+ LL R S L V + + A +V +D+ + Q E
Sbjct: 317 HF----LCRPAGQGKSMLLVRFGSTLRSPLAKV-LPSWYFHQNACKVFEQDMGFLSSQNE 371
>gi|427724861|ref|YP_007072138.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427356581|gb|AFY39304.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 451
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 55/337 (16%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNEGRI 276
W+PV F DL F E+P VI+ ++ V + C HR PL G + +G +
Sbjct: 23 WYPVHFVQDLSKTEPTRFVLLEKPLVIWWHEESQQWNVFSDVCPHRLAPLSEGRIVDGCL 82
Query: 277 QCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 324
+CPYHGW++S G CEK+P + + + S PC ++G+++++PG +
Sbjct: 83 ECPYHGWQFSESGSCEKIPFQKEDGTANENSRATVASYPCRVEQGLLFVYPGKLENAETQ 142
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P TIP L G + A++ ++P + LL+N+LD +H FTH + +
Sbjct: 143 PLPTIPALDQYPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPRVGNRKNAKEFIL 202
Query: 385 FLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA---------- 432
++ +G G W+ P + GKL Q T A
Sbjct: 203 DVSDIEKTGFTGIWEEGP------------------RRGKLGAQKTTFFAPSAMWHDIEE 244
Query: 433 THLHQLHVC---LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAEQVLNEDLR 486
+ Q+ C +P+ + K R L R+ F S + + F +Y R H ++ + ED +
Sbjct: 245 SSFGQVMTCVYAVPTEKGKCRALVRLPFRFKSAIPRLVF-KYTPRWFSHVSQMGILEDDQ 303
Query: 487 LVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 518
+ L QER N A LP G D + YR W
Sbjct: 304 IFLHLQERELEKSKKNYAQTCYLPTGSDLFVLAYRKW 340
>gi|125541435|gb|EAY87830.1| hypothetical protein OsI_09250 [Oryza sativa Indica Group]
Length = 539
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 40/334 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ DD +P F+ V++R G+ C ++ C HR L G + +G+++
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGKLE 148
Query: 278 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW-PGDEPPTA-TIP 330
C YHGW++ +GKC K+P + RN +S + +G++W W G PP +P
Sbjct: 149 CLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
Query: 331 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 386
P + GF V ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 WFEPYARPGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLFFEV 267
Query: 387 TPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQC-ATHLHQ 437
T + G GYW P+ + + F PC++ +T+ + K GK QC + H
Sbjct: 268 TERTPGGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVDKDGK------EQCFSAHF-- 319
Query: 438 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ----- 491
+C P+ + K+ LL R S + ++K +P ++ + A +V +D+ + Q
Sbjct: 320 --LCRPAGQGKSMLLVRFGSTQTSPLVKVLP--RWYFHQNACKVFEQDMGFLSSQNEVLL 375
Query: 492 QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
+E+M NL D YR W D G
Sbjct: 376 REKMPTKELYLNL-RSSDTWVAEYRRWMDRAGHG 408
>gi|115449167|ref|NP_001048363.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|47497136|dbj|BAD19185.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|47497583|dbj|BAD19653.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|113537894|dbj|BAF10277.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|125583977|gb|EAZ24908.1| hypothetical protein OsJ_08688 [Oryza sativa Japonica Group]
gi|215740658|dbj|BAG97314.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767906|dbj|BAH00135.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 147/297 (49%), Gaps = 34/297 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ DD +P F+ V++R G+ C ++ C HR L G + +G+++
Sbjct: 89 WYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCPHRLAKLSEGQLVDGKLE 148
Query: 278 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIW-PGDEPPTA-TIP 330
C YHGW++ +GKC K+P + RN +S + +G++W W G PP +P
Sbjct: 149 CLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGVVWAWMSGTNPPDERKLP 208
Query: 331 CLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 386
P + GF V ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 WFEPYARPGF-TDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLFFEV 267
Query: 387 TPAS--GLQGYWD----PYPID-MEFRPPCMVLSTIG-ISKPGKLEGQNTRQC-ATHLHQ 437
T + G GYW P+ + + F PC++ +T+ + K GK QC + H
Sbjct: 268 TERTPRGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVDKDGK------EQCFSAHF-- 319
Query: 438 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
+C P+ + K+ LL R S + ++K +P ++ + A +V +D+ + Q E
Sbjct: 320 --LCRPAGQGKSMLLVRFGSTQTSPLVKVLP--RWYFHQNACKVFEQDMGFLSSQNE 372
>gi|257059415|ref|YP_003137303.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589581|gb|ACV00468.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 450
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 46/363 (12%)
Query: 202 NVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 261
+VS P KN W+P+ F D F ++EP+V+F K G C+Q+ C H
Sbjct: 16 SVSPPQSDCQLDWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNKQGKLVCLQDICPH 75
Query: 262 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEG 314
RA L G + +G ++C YHGW+++ +GKC +P QL +N I S +++G
Sbjct: 76 RAAKLSDGQILDGNLECLYHGWQFNDEGKCVHIP--QLPDDTPIPKNACITSFFVVQKQG 133
Query: 315 MIWIWPG--DEPPTATIPCLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
+IW W G +E IP + ++ + +++LP + L++N++D AH +H
Sbjct: 134 IIWFWRGKKEEADETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHG 193
Query: 372 TFAKGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVLSTIGISKPGK 422
+ + L + S ++G Y I ++F P +V+ + P +
Sbjct: 194 SLGNRKNAQPLTMEVKEKS-IEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTL--PNQ 250
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW-RHF-AEQV 480
L G T L+ LPS + RLL R +++++ ++ W H + ++
Sbjct: 251 LMG------GTALYS----LPSGKGSCRLLLR---NYSNIPNWKARLKPRWLLHLGSNRI 297
Query: 481 LNEDLRLVLGQQERMNNGANVWN---LPV-GYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
L ED ++ +Q + LP+ D L V YR W D K LPF +
Sbjct: 298 LEEDSVFIMAEQSILEKSKQTMQDLILPLKTSDLLVVEYRKWLDTF---GKALPFYQGYT 354
Query: 537 TRK 539
T K
Sbjct: 355 TAK 357
>gi|91781025|ref|YP_556232.1| vanillate demethylase [Burkholderia xenovorans LB400]
gi|91693685|gb|ABE36882.1| Vanillate demethylase [Burkholderia xenovorans LB400]
Length = 353
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 35/262 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ +S DL M+ E V+FR DG + + C HR PLHLG + +
Sbjct: 4 LRNTWYAAGWSQDLAAGAMLGRTMLNEQLVLFRADDGTVSALSDICPHRFAPLHLGKIVD 63
Query: 274 G-RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT--A 327
G RIQC YH E+ G C K P + + K+++ P E+ +IW+W G++ +
Sbjct: 64 GCRIQCAYHALEFDGTGACVKNPHGKQKIPAAAKLQAYPVVEKHSLIWVWMGEQAAADPS 123
Query: 328 TIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS--- 381
IP L P SGF++ + + + L++DNL+DL+H F H +++ +
Sbjct: 124 VIPDFSMLDPDSGFQVSRRDWLHMDASYDLVVDNLMDLSHTAFLHDGILGSKYTIKADTS 183
Query: 382 --------LVKFLTPASGLQGYWD----------PYPIDMEFRPPCMVLSTIGISKPGKL 423
V L P + G++D Y ++ + P +++ G++ PG
Sbjct: 184 LEQTGETVKVTRLMPNVPVPGFFDLMFNRDGGIVDYWTEIRWNLPGCLMNNTGVTLPGA- 242
Query: 424 EGQNTRQCATHLHQLHVCLPSS 445
R T ++ +H P +
Sbjct: 243 ----PRSEGTGVYGMHFLTPET 260
>gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis]
Length = 552
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 44/336 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + D+ DD + F++ V+++ +G C ++ C HR L G + +GR++
Sbjct: 102 WYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGELRCYEDRCPHRLAKLSEGQLIDGRLE 161
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIWIWPGDEPPTATIP 330
C YHGW++ +GKC K+P QL N KI C E +G++W+W + P P
Sbjct: 162 CLYHGWQFEGEGKCVKIP--QLPTNAKIPQSACVKTYEIRESQGVVWVWMSRKTP----P 215
Query: 331 CLLPPSGFEIHA-------EIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPS 381
L FE A ELP +H +LL+NL+D AH P +H T AK +
Sbjct: 216 NLNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAHIPISHDRTDWSAKREDAQA 275
Query: 382 LVKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
L +T + G G+W DP ++ + F PC++ + I ++ T
Sbjct: 276 LRFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNRDIVDENGVKHYFT------ 329
Query: 435 LHQLHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
L +C P+ + K L+ R + + K +P Q+ + A +V +D+ + Q E
Sbjct: 330 --GLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIP--QWYFHQNASKVFEQDMGFLSSQNE 385
Query: 494 -RMNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 525
M NL + D YR W D + G
Sbjct: 386 VLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHG 421
>gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
Length = 552
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 151/335 (45%), Gaps = 36/335 (10%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
K W+P+ + ++ DD + F++ V+F+ + C ++ C HR L G + +G
Sbjct: 99 KEEWYPLYLTKNVPDDAPLGLTVFDKNLVLFKDGNDQFQCYEDRCPHRLAKLSEGQLIDG 158
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIW--PGDEPPTA 327
R++C YHGW++ +GKC K+P R+ +K+ + +G+IW+W P P +
Sbjct: 159 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVRDSQGVIWVWMSPKVPPNVS 218
Query: 328 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 383
IP GF+ ELP +H +LL+NL+D AH P +H T AK L+
Sbjct: 219 KIPWFENFARPGFQ-DVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLL 277
Query: 384 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHL 435
+T + G G+W P + F PC++ + I K G++ +
Sbjct: 278 FEVTERTDRGFAGWWGREKDGTKPNFLRFEAPCVLQNNREIVDKNGEI---------NYF 328
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ---- 491
L +C P+ + K+ L+ R S + + F Q+ + A +V +D+ + Q
Sbjct: 329 SGLFLCRPTGQGKSMLIVRFGGTKRSPIVKL-FPQWYFHQNASKVFEQDMGFLSSQNEIL 387
Query: 492 -QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
+E++ NL D YR W D + G
Sbjct: 388 LKEKVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 421
>gi|307546530|ref|YP_003899009.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
gi|307218554|emb|CBV43824.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
Length = 383
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 142/345 (41%), Gaps = 61/345 (17%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L+D + C EP V FRG +G V++ C HR PL LG V +G
Sbjct: 37 KNTWYVACTPDELEDKPLGRTIC-NEPIVFFRGDEGRVAAVEDFCPHRGAPLSLGFVRDG 95
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E +GKC MP ++R I++ P E+ G +WIWPGD P P L+
Sbjct: 96 KLVCGYHGLEMGCNGKCSSMPGQRVRGFPSIRAYPVEERHGFVWIWPGD--PDKADPALI 153
Query: 334 PPSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P E+H + + ++ L++DNL+DL H + H S+ + ++
Sbjct: 154 P----ELHWANDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----PEIE 204
Query: 385 FLTPASGLQG----------------YW----------DPYPIDM----EFRPPCMVLST 414
P + ++G +W D P+D F PP VL
Sbjct: 205 EAAPETKVEGDEVTTGRHMHDIPAPPFWQTALRGNGLADDVPVDRWQICRFTPPSHVLIE 264
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 474
+G++ G + P + + M+ +F P Q L
Sbjct: 265 VGVAHAGHGGYDAPANLKASSIVVDFITPETDTSIWYFWGMARNFK------PEDQELTD 318
Query: 475 HFAE---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
E Q+ +EDL ++ QQ + + L + D GV+ R
Sbjct: 319 QIREGQGQIFSEDLEMLESQQRNLLRYPDRQLLKLNIDGGGVQAR 363
>gi|297821841|ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
gi|297324642|gb|EFH55062.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 150/334 (44%), Gaps = 39/334 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ DD + ++ V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNIPDDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 278 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
C YHGW++ +GKC K+P S ++ + +K+ + +G++W+W + P P
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205
Query: 333 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 383
LP P F+I ELP +H +LL+NL+D AH P +H T AK LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263
Query: 384 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 435
+T S G G W + F PC++ + + EG++ +
Sbjct: 264 FEVTERSNRGFAGTWGREKDGGKGSNLLRFDAPCVLQNN------REFEGKDG--VKNYF 315
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 494
L +C P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374
Query: 495 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 525
M +L + D YR W D + G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>gi|218246369|ref|YP_002371740.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166847|gb|ACK65584.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 450
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 161/363 (44%), Gaps = 46/363 (12%)
Query: 202 NVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 261
+VS P KN W+P+ F D F ++EP+V+F G C+Q+ C H
Sbjct: 16 SVSPPQSDCQLDWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNNQGKLVCLQDICPH 75
Query: 262 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEG 314
RA L G + +G ++C YHGW+++ +GKC +P QL +N I S +++G
Sbjct: 76 RAAKLSDGQILDGNLECLYHGWQFNDEGKCVHIP--QLPDDTPIPKNACITSFFVVQKQG 133
Query: 315 MIWIWPG--DEPPTATIPCLLPPSGFEIHA-EIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
+IW W G +E IP + ++ + +++LP + L++N++D AH +H
Sbjct: 134 IIWFWRGKKEEADETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHG 193
Query: 372 TFAKGWSVPSLVKFLTPASGLQGYWDPYP---------IDMEFRPPCMVLSTIGISKPGK 422
+ + L + S ++G Y I ++F P +V+ + P +
Sbjct: 194 SLGNRKNAQPLTMEVKEKS-IEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTL--PNQ 250
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW-RHF-AEQV 480
L G T L+ LPS + RLL R +++++ ++ W H + ++
Sbjct: 251 LMG------GTALYS----LPSGKGSCRLLLR---NYSNIPNWKARLKPRWLLHLGSNRI 297
Query: 481 LNEDLRLVLGQQERMNNGANVWN---LPV-GYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
L ED ++ +Q + LP+ D L V YR W D K LPF +
Sbjct: 298 LEEDSVFIMAEQSILEKSRQTMQDLILPLKTSDLLVVEYRKWLDTF---GKALPFYQGYT 354
Query: 537 TRK 539
T K
Sbjct: 355 TAK 357
>gi|91782291|ref|YP_557497.1| vanillate O-demethylase oxygenase [Burkholderia xenovorans LB400]
gi|91686245|gb|ABE29445.1| Vanillate O-demethylase oxygenase subunit [Burkholderia xenovorans
LB400]
Length = 345
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 151/343 (44%), Gaps = 39/343 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ AFS D+K + EP V+FR G G + + C+HRA PL G V+
Sbjct: 3 LRNMWYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+CPYHG E++ G C +P + ++S P E++G+IWIW G EP A +
Sbjct: 63 DIIRCPYHGLEFNAAGVCAHIPGQERIPAAANVRSYPVSERDGLIWIWMG-EPEKADLRS 121
Query: 332 LLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--------FAKGWS 378
++ G+ M + LL+DN+LDL H + H +T F S
Sbjct: 122 IMSNPEHRDPGWSWRP-YYMHVNSNWQLLVDNILDLTHVAYIHANTIGGNPQTHFNADMS 180
Query: 379 V-------------PSLV--KFLTPASGLQGYWDPYPIDMEFRP--PCMVLSTIGISKPG 421
V P+ V K A G +G D + + +E+RP ++ G + G
Sbjct: 181 VQFDGEKVTLLRKMPNSVPPKTYVAAGGFKGNVDRWQM-VEYRPCGGNVLRVNAGACEVG 239
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ R L +H P + T ++ + D A VP M L+ F E +
Sbjct: 240 TGAYEGRRDNGFTLLNVHGVTPETETTTHYIWTICTD-APRESGVPDM--LFDQFYETIC 296
Query: 482 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEK 524
ED R + QQ R+N+ ++ + + D R RL + L +
Sbjct: 297 -EDERALEAQQRRINDMPDMRFVGIASDGAVSRARLLLERLHE 338
>gi|299532710|ref|ZP_07046098.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719345|gb|EFI60314.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 358
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
+S QP T +N W+ A + ++ D + C E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHR 57
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG 321
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPG
Sbjct: 58 GAPLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPG 117
Query: 322 DEPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------- 369
D+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 118 DK--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQA 175
Query: 370 ------------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRP 407
TS F + P K ++GL D P+D F P
Sbjct: 176 EIDETPCKTEVMGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTP 232
Query: 408 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVL 463
P VL +G++ GK + + + P + + M+ F ASV
Sbjct: 233 PSHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVT 292
Query: 464 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 AAIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 30/295 (10%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ +D + F++ V+F+ +G C ++ C HR L G + +GR++
Sbjct: 82 WYPLYLTQNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLE 141
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 330
C YHGW++ +GKC K+P R +K+ + +G+IW+W + P + +P
Sbjct: 142 CLYHGWQFEGEGKCVKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLP 201
Query: 331 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 386
GF+ + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 202 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEV 260
Query: 387 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 438
T + G G+W P + F PC++ + I K G++ + L
Sbjct: 261 TERTDRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEI---------NYFSGL 311
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
+C P+ + K+ L+ R S L V F ++ + A +V +D+ + Q E
Sbjct: 312 FLCRPTGQGKSMLIVRFGGTKRSPLAKV-FPKWYFHQNASKVFEQDMGFLSSQNE 365
>gi|418532828|ref|ZP_13098725.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450154|gb|EHN63209.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 358
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
+S QP T +N W+ A + ++ D + C E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHR 57
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG 321
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPG
Sbjct: 58 GAPLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPG 117
Query: 322 DEPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------- 369
D+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 118 DK--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQA 175
Query: 370 ------------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRP 407
TS F + P K ++GL D P+D F P
Sbjct: 176 EIDETPCKTEVIGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTP 232
Query: 408 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVL 463
P VL +G++ GK + + + P + + M+ F ASV
Sbjct: 233 PSHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVT 292
Query: 464 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 AAIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|264680324|ref|YP_003280234.1| vanillate monoxygenase [Comamonas testosteroni CNB-2]
gi|262210840|gb|ACY34938.1| vanillate monoxygenase [Comamonas testosteroni CNB-2]
Length = 358
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 147/353 (41%), Gaps = 54/353 (15%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
+S QP T +N W+ A + ++ D + C E V +R +G V++ C HR
Sbjct: 1 MSKQAQP--TYPRNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHR 57
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG 321
PL LG V EG++ C YHG E DGK MP ++R IKS P E+ G +W+WPG
Sbjct: 58 GAPLSLGRVCEGKLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPG 117
Query: 322 DEPPTATIPCLLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------- 369
D+ A L+P + + E + + ++ L++DNL+DL H + H
Sbjct: 118 DK--DAADAALIPDLQWHDNPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQA 175
Query: 370 ------------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRP 407
TS F + P K ++GL D P+D F P
Sbjct: 176 EIDETPCKTEVLGDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTP 232
Query: 408 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVL 463
P VL +G++ GK + + + P + + M+ F ASV
Sbjct: 233 PSHVLIEVGVAHAGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVT 292
Query: 464 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ Q+ ++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 AAIKQGQH-------KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|295700273|ref|YP_003608166.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439486|gb|ADG18655.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 352
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ V +S++ +VPF +EP ++R DG +++ C HR PL +G
Sbjct: 4 LRNCWYMVGWSSEFSATDIVPFTVMDEPLALYRKDDGTLVALEDLCPHRLAPLTVGRKEG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG +++ DG+C ++P + + K ++S P E+ G W+W GD P A +
Sbjct: 64 DELRCMYHGLKFAADGRCTEIPGQERISSKVCVRSYPIEEKHGAAWVWMGD-PAKADVAL 122
Query: 332 LLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
+ P G + + ++ VM E L+ DNLLDL+HAPF H STF V
Sbjct: 123 IPPIEGPDSDTYSMVCSKFVMNGNAE--LVADNLLDLSHAPFIHESTFGANNKV 174
>gi|255597961|ref|XP_002536894.1| oxidoreductase, putative [Ricinus communis]
gi|223518190|gb|EEF25490.1| oxidoreductase, putative [Ricinus communis]
Length = 293
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 124/280 (44%), Gaps = 40/280 (14%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
V P + ++N W+ ++ +L +V EP V++R +DG P + + C+HR PL
Sbjct: 17 VAPEDRFIRNSWYVALWADELPAGKLVHQTILGEPVVLYRKEDGAPAAIVDRCSHRFAPL 76
Query: 267 HLGSVNEG-RIQCPYHGWEYSTDGKCEKMPS---TQLRNVKIKSLPCFEQEGMIWIWPGD 322
+G + G RIQCPYHG E+ GKC K P T ++S P E+ IWIW GD
Sbjct: 77 SMGKLLPGNRIQCPYHGLEFDQTGKCVKNPHGNCTIPAASHLRSFPVIEKYKFIWIWMGD 136
Query: 323 -EPPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
+ A IP CL I + + + L++DNLLDL+H + H +
Sbjct: 137 TQADPAKIPDYSCLDTAPAAHITDTGYLNIKAHYELIVDNLLDLSHTAYVHEGILGNSGT 196
Query: 379 V------------------------PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 414
V P +++ L+P +G D + + P ++L
Sbjct: 197 VVADIGVEQVGDVITVARPSKDTVTPGMLQMLSPGGFERG--DQHQTISWYAPSNLILE- 253
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYR 454
G+SK G+ + Q T A LH+ P + + + +R
Sbjct: 254 FGVSKVGEPKSQGTGYLA-----LHLITPETARSSHYRFR 288
>gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon
at the inner envelope membrane of chloroplasts 55-II;
Flags: Precursor
gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana]
gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
Length = 539
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 39/334 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ +D + ++ V+++ +G C ++ C HR L G + +GR++
Sbjct: 88 WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147
Query: 278 CPYHGWEYSTDGKCEKMP----STQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
C YHGW++ +GKC K+P S ++ + +K+ + +G++W+W + P P
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEVKDSQGVVWVWMSTKTPPN--PEK 205
Query: 333 LP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 383
LP P F+I ELP +H +LL+NL+D AH P +H T AK LV
Sbjct: 206 LPWFENFARPGFFDI--STTHELPYDHSILLENLMDPAHVPISHDRTDFTAKREDAQPLV 263
Query: 384 KFLTPAS--GLQGYWDPYPID------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 435
+T S G G W + F PC++ + + EG++ + +
Sbjct: 264 FEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNN------REFEGKDGVK--NYF 315
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-R 494
L +C P+ + K+ L+ R + S L V Q+ W A +V +D+ + Q E
Sbjct: 316 SGLFLCRPTGQGKSMLIVRFGVTKRSPLVSV-LPQWFWHQNACKVFEQDMGFLSSQNEVL 374
Query: 495 MNNGANVWNLPVGY---DKLGVRYRLWRDALEKG 525
M +L + D YR W D + G
Sbjct: 375 MKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHG 408
>gi|168040321|ref|XP_001772643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676019|gb|EDQ62507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 487
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 48/338 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ + F+ V+F G C ++ C HR L G V +G+++
Sbjct: 35 WYPMYLTAEMPKAAPLGLTVFDRELVLFYDDKGELHCFEDRCPHRLAKLSEGKVTDGKLE 94
Query: 278 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFE------QEGMIWIWPGDEPPTATIPC 331
C YHGW++ G+C K+P + KI C + +G++W+W GD P
Sbjct: 95 CLYHGWQFEGSGQCTKIPQL-VPGAKIPKQACAKAYEVKISQGVVWVWLGDR--ATADPS 151
Query: 332 LLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLV 383
LP GF+ H + ELP ++ +L++NL+D AH P +H T A+ + +LV
Sbjct: 152 KLPWFEHYEREGFQ-HISAIHELPYDYSILVENLMDPAHIPISHDRTDPSARRENAQALV 210
Query: 384 KFLTPAS--GLQGYWD-----PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
+T S G G W + F PC+V + KP + H+
Sbjct: 211 FEVTERSSRGFAGKWKEISSPSFTNATRFEAPCIVRNDKEYVKPDGTDA--------HMS 262
Query: 437 QLHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 495
+ +C P+ + K L+ R S +F LK +P + + V +D+ + Q E +
Sbjct: 263 AVFLCRPAGQGKCMLIARFGSTNFPGSLKMIP--PWYIHITSNTVFEQDMGFLASQNEDL 320
Query: 496 NNGANVWNLPV--------GYDKLGVRYRLWRDALEKG 525
NLP D +R W D + G
Sbjct: 321 VKK----NLPTKDLYLNLKSSDTWVSEFRKWNDLVGHG 354
>gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 34/331 (10%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + D+ +D + F++ V++R G C ++ C HR L G + +GR++
Sbjct: 92 WYPLYLTKDVPEDAPLGLTVFDKQLVLYRDGAGELHCHEDRCPHRLAKLSEGQLIDGRLE 151
Query: 278 CPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA--TIP 330
C YHGW++ +GKC K+P + R+ +++ + +G++W+W E P+ +IP
Sbjct: 152 CLYHGWQFEGEGKCVKIPQLPSDAKIPRSACLRTYEVRDSQGVVWVWMSLEKPSTLKSIP 211
Query: 331 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVKFL 386
GF + I ELP +H +LL+NL+D AH P +H TS AK L +
Sbjct: 212 WFENFDRPGFRDFSSI-HELPYDHSILLENLMDPAHIPISHDRTSYPAKREDAQPLDFEV 270
Query: 387 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 439
T + G G W P + F PC++ + E N + + L
Sbjct: 271 TERTNRGFAGRWGNAKDQPLSNFLRFEAPCVLQN--------NRETPNKKGGIDYFTGLF 322
Query: 440 VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QER 494
+C P+ + K+ ++ R AS ++ F + A +V +D+ + Q +E+
Sbjct: 323 LCRPTGQGKSMVIVRFG-STASTVRLNLFPAWFLHQNACRVFEQDMGFLSSQNEVLMKEK 381
Query: 495 MNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
+ NL D + YR W D + G
Sbjct: 382 VPTKELYLNL-RSSDTWVLEYRRWMDKVGHG 411
>gi|168002521|ref|XP_001753962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694938|gb|EDQ81284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 481
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 151/345 (43%), Gaps = 41/345 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ + F+ V+F G C ++ C HR L G + +G+++
Sbjct: 29 WYPMYLTDEMPKAAPLGLTVFDRQLVLFYDDKGELNCFEDRCPHRLAKLSEGKMTDGKLE 88
Query: 278 CPYHGWEYSTDGKCEKMPSTQLR-NVKIKSLPCFEQ------EGMIWIWPGD----EPPT 326
C YHGW++ G+C K+P QL KI C ++ +G+IW+W GD +P
Sbjct: 89 CLYHGWQFEGSGQCTKIP--QLAPGAKIPKQACAKKYEVKVSQGVIWVWLGDRATADPKK 146
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 384
GF H + ELP ++ +LL+NL+D AH P +H T T AK + +LV
Sbjct: 147 VPWYEHYEREGF-YHLSTIHELPYDYSILLENLMDPAHIPISHDRTDTNAKRENAQALVF 205
Query: 385 FLT--PASGLQGYWD-----PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
+T + G G W + F PC + + + KP +G +L
Sbjct: 206 EVTERTSRGFAGIWKEISSPEFTNTTRFEAPCCLRNDKVVDKP---DGSK-----DYLSA 257
Query: 438 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ---- 492
+ +C PS + K+ L+ R S F + K +P + + V +D+ + Q
Sbjct: 258 VFLCRPSGQGKSMLIVRFGSTKFPDIFKKIP--GWFLHKTSNTVFEQDMGFLASQNAYLV 315
Query: 493 ERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQT 537
++ +++ D +R W D + +G +P+ QT
Sbjct: 316 KKNQPTKDLYLNLKSSDTWVSEFRKWNDRVGRG---MPYYFGHQT 357
>gi|221065063|ref|ZP_03541168.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|57116471|gb|AAW33713.1| VanA [Comamonas testosteroni]
gi|220710086|gb|EED65454.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 358
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 141/341 (41%), Gaps = 52/341 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ A + ++ D + C E V +R +G V++ C HR PL LG V EG
Sbjct: 11 RNTWYVAATAAEVTDKPLGRQICGER-MVFYRALEGKMAAVEDFCPHRGAPLSLGRVCEG 69
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E DG+ MP ++R IKS P E+ G +W+WPGD+ A L+
Sbjct: 70 KLVCGYHGLEMGCDGRTVAMPGQRVRGFPAIKSYPVEERYGFVWVWPGDK--DAADAALI 127
Query: 334 PPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTH------------------- 369
P + E + + ++ L++DNL+DL H + H
Sbjct: 128 PDLQWHDSPEWAYDGGLFHIKADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTEVI 187
Query: 370 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 419
TS F + P K ++GL D P+D F PP VL +G++
Sbjct: 188 GDSEVVTSRFMENIEAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPPSHVLIEVGVAH 244
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRH 475
GK + + + P + + M+ F ASV + Q+
Sbjct: 245 AGKGGYDAADEHKVYSMVVDFITPETDGSMWYFWGMARKFNPGDASVTAAIKQGQH---- 300
Query: 476 FAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 301 ---KIFSEDLEMLELQQRNLEDYPQRQLLKLNIDAGGVQSR 338
>gi|399909695|ref|ZP_10778247.1| vanillate monooxygenase [Halomonas sp. KM-1]
Length = 354
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 140/342 (40%), Gaps = 55/342 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C EP V+FRG +G V++ C HR PL LG V +G
Sbjct: 9 KNTWYVACTPDEIADKPLGRTIC-NEPIVLFRGDEGRVAAVEDFCPHRGAPLSLGFVRDG 67
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E DGKC MP ++R I++ P E+ G +W+WPGD P P L+
Sbjct: 68 KLVCGYHGLEMGCDGKCAGMPGQRVRGFPSIRAYPVEERHGFVWLWPGD--PEQADPNLI 125
Query: 334 PPSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P E+H + + E+ L++DNL+DL H + H S+ + ++
Sbjct: 126 P----ELHWANNPDWAYGGGLYHIHCEYRLMIDNLMDLTHETYVHASSIGQ-----PEIE 176
Query: 385 FLTPASGLQG----------------YW----------DPYPID----MEFRPPCMVLST 414
P + + G +W D P+D F PP VL
Sbjct: 177 EAAPETTVNGDEVITSRHMENIPAPPFWQAALRGCGLADDVPVDRWQICRFTPPSHVLIE 236
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 474
+G++ G G A + V + T + Y + + + + R
Sbjct: 237 VGVAHAGN--GGYDAPAAVKASSIVVDFITPETDTSIWYFWGMARNFKPEDGELTEKI-R 293
Query: 475 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ + L + D GV+ R
Sbjct: 294 EGQGKIFAEDLDMLEAQQRNLLRYPERQLLKLNIDGGGVQAR 335
>gi|408376802|ref|ZP_11174406.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
gi|407749492|gb|EKF61004.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
Length = 353
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 34/273 (12%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ +LK ++P +P V++R ++G P + + C HR PL LG +
Sbjct: 9 NAWYAAAYDVELKR-QLLPRTICNKPVVLYRKENGTPVALADACWHRLVPLSLGRLEGDN 67
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG E+ G+C MPS N +KS P E+ IWIWPGD P P L+
Sbjct: 68 VICGYHGLEFDETGRCVYMPSQDTINPSACVKSYPIAEKHRFIWIWPGD--PALADPALV 125
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P + + ++E+ ++ L++DNL+DL H F H S+ G + F +
Sbjct: 126 PDMHWNQDPDWAADGKLIEVKCDYRLVVDNLMDLTHETFVHGSSI--GNRAVAEAPFESS 183
Query: 389 ASGLQGY---W----DPYP-----------ID----MEFRPPCMVLSTIGISKPGKLEGQ 426
S Y W DP P +D + F PC V +G+++ G Q
Sbjct: 184 HSDRFAYITRWMEDIDPPPFWRKQFGRPGKVDRWQIIRFEAPCTVTIDVGVAEAGTGAKQ 243
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 459
R + + L+ PS+ K + + ++
Sbjct: 244 GDRSKGVNGYVLNTITPSTDKTCLYFWAFARNY 276
>gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum]
Length = 553
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 149/332 (44%), Gaps = 36/332 (10%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ D + +++ V+FR + C ++ C HR L G + +GR++
Sbjct: 103 WYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLE 162
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPP--TATIP 330
C YHGW++ +GKC K+P ++ +K+ + +G++W+W + P + IP
Sbjct: 163 CLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSRKTPPNVSKIP 222
Query: 331 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 386
GF+ ELP +H +LL+NL+D AH P +H T AK +L +
Sbjct: 223 WFENFARPGFQ-DISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQALGFEV 281
Query: 387 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 438
T + G G+W P + F PC++ + I K G++ H L
Sbjct: 282 TERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVDKNGEI---------NHFSGL 332
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 493
+C P+ + K+ L+ R S L + F ++ + A +V +D+ + Q +E
Sbjct: 333 FLCRPTGQGKSMLIVRFGATKRSPLIKL-FPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391
Query: 494 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
++ NL D YR W D + G
Sbjct: 392 KVPTKELYLNLKSS-DTWVAEYRKWMDKVGHG 422
>gi|303278118|ref|XP_003058352.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459512|gb|EEH56807.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 573
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 140/331 (42%), Gaps = 56/331 (16%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK---------DGIPGCVQNT 258
+P + N W+PVAF DL DD F EP V ++ K G C +
Sbjct: 92 EPSSYDWHNQWYPVAFVADLVDDAPFTFTLLGEPLVFWKDKTTTTNSASGGGTYRCTADK 151
Query: 259 CAHRACPLHLGSVNE-GRIQCPYHGWEY-STDGKCEKMP---------STQLRNVK--IK 305
C HR PL G VN+ G I+C YHGW + GKC +P T L + + +
Sbjct: 152 CPHRLVPLSEGRVNDAGEIECGYHGWTFDGASGKCTSIPQLPATGNAIDTALASPRSCVT 211
Query: 306 SLPCFEQEGMIWIWP--------GDEPPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLL 356
P +GM+++ P PP IP + P + +I +LP+++ LL
Sbjct: 212 PYPTAVAQGMLFVLPVSALKSDPASRPPVPVIPEIDDPGASHCVVQDISRDLPMDYATLL 271
Query: 357 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA---SGLQGYWDPYPID-------MEFR 406
+N++D++H PFTH + + + +V LT G +G W P + F+
Sbjct: 272 ENVMDISHVPFTHHGSVGRRENATPVVAELTTELADGGFEGIWKEGPRNGKYGSQYTHFQ 331
Query: 407 PPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 466
P ++ T+ T Q T + +P++ + RL+ R F +
Sbjct: 332 APALMRHTL-----------RTDQFTT--LTVVYAVPTTPGRCRLMARFPFIFKAAPPRF 378
Query: 467 PF--MQYLWRHFAEQVLNEDLRLVLGQQERM 495
F + W H + + ED ++ L +QER+
Sbjct: 379 FFKLVPRWWSHLNQNSILEDDQIFLHKQERL 409
>gi|374367149|ref|ZP_09625217.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
gi|373101343|gb|EHP42396.1| vanillate O-demethylase oxygenase [Cupriavidus basilensis OR16]
Length = 348
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 140/343 (40%), Gaps = 43/343 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ +L + C E V+FRG+DG +++ C HR PL LG V +
Sbjct: 3 LKNTWYVACTPDELAGKPLGRTIC-NEKMVLFRGEDGNVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTATIP 330
G++ C YHG DGKC +M ++ I+S P E+ G +W WPGD ATIP
Sbjct: 62 GQLVCGYHGMTMGRDGKCARMAGQRVGGFPSIRSYPAVERYGFVWAWPGDAALADAATIP 121
Query: 331 CL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 389
L S H + + ++ L++DNL+DL H + H S+ + + ++ PA
Sbjct: 122 HLEWAVSADWAHGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----AEIEESAPA 176
Query: 390 SGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISK 419
+ ++G +W D P D F PP V+ +G++
Sbjct: 177 TKVEGDMVVTGRHMEGIMPPPFWAAALRGNGLADDVPCDRWQICRFTPPSHVMIEVGVAH 236
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
GK Q + P + + M+ +F + + R +
Sbjct: 237 AGKGGYHAEPQHKASSIVVDFITPETETSIWYFWGMARNFKADDAQ---LTETIRDGQGK 293
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 522
+ EDL ++ QQ + L + D GV+ R D L
Sbjct: 294 IFAEDLEMLEAQQRNILANPERKLLKLNIDAGGVQARRILDRL 336
>gi|217076804|ref|YP_002334520.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|419761274|ref|ZP_14287530.1| oxidase-related protein [Thermosipho africanus H17ap60334]
gi|217036657|gb|ACJ75179.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|407513580|gb|EKF48477.1| oxidase-related protein [Thermosipho africanus H17ap60334]
Length = 326
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 142/342 (41%), Gaps = 50/342 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ V S +LK +V F E V +R KDG C+ + C HR L G + E
Sbjct: 2 IKNQWYIVMSSKELKKGKLVGVTRFGEKLVFWRSKDGRVNCISDICCHRGASLSHGRLLE 61
Query: 274 G-RIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGDEPPT 326
RI CP+HG+EY TDGK + +P+ RNV K+K +E IW+W GD PT
Sbjct: 62 NDRIMCPFHGFEYDTDGKVKVIPAFG-RNVEVPERYKVKKYYTYEIADFIWVWYGDGEPT 120
Query: 327 ATIPCLLPPSGFEI-HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 376
IP E ++E + + ++N LD+ H P H +T KG
Sbjct: 121 H-IPKYFDDISEEFSYSEFTQVWNVNYTRAIENQLDVVHVPIVHYNTIGKGNRTVVDGPI 179
Query: 377 --WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK--LEGQNTRQCA 432
W ++ F G P I I+ K LE +
Sbjct: 180 VKWQNETMFYFYVHNRVDDG------------TPAKKPDEIDINDISKVYLEFKFPNFWQ 227
Query: 433 TH-LHQLHVC---LPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
H L +L V +P + T++ R + F + + + F VLN+D R+V
Sbjct: 228 NHILDKLRVTAAFVPIDEEHTKIYLRFYVAFTKIRFINKIISSIGNIFNRIVLNQDRRVV 287
Query: 489 LGQ-----QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
Q + +MN + +LP+ + YR R+ L+ G
Sbjct: 288 ETQIPKKTELKMNEKLILGDLPI------IEYRKKREELKLG 323
>gi|398811407|ref|ZP_10570207.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
gi|398080780|gb|EJL71578.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
Length = 351
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 143/335 (42%), Gaps = 41/335 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ + ++ D + C E+ V++R +G +++ C HR PL LGSV EG
Sbjct: 4 KNAWYVACTANEIDDKPLGRMICGEK-LVLYRAAEGKAAALEDFCPHRGAPLSLGSVVEG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E DGK MP ++R I+S P E+ G +W+WPGD P + P L
Sbjct: 63 KLVCGYHGLEMGCDGKTVAMPGQRVRGFPAIRSFPVIERYGFVWVWPGD--PALSDPAKL 120
Query: 334 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
S + + + ++ L++DNL+DL H + H ++ + + K +T
Sbjct: 121 HHLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHATSIGQKEIDETPTKTVTE 180
Query: 389 ASGLQG-----------YW----------DPYPIDM----EFRPPCMVLSTIGISKPGKL 423
+ +W D P+D F PP VL +G++ GK
Sbjct: 181 GDTVTTARHMENIMAPPFWRMALRGNHLADDVPVDRWQICRFTPPSHVLIEVGVAHAGK- 239
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLY--RMSLDFASVLKHVPFMQYLWRHFAEQVL 481
G A + + V + +T + Y M+ +F H + R ++
Sbjct: 240 -GGYHADPAHKVSSIVVDFITPETETSIWYFWGMARNFQP---HDKALTASIREGQGKIF 295
Query: 482 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ + L + D GV+ R
Sbjct: 296 SEDLEMLESQQRNLLAHPQRQLLKLNIDSGGVQSR 330
>gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 540
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 36/332 (10%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + ++ +D + F++ V+F+ +G C ++ C HR L G + +GR++
Sbjct: 90 WYPLYLTLNVPEDAPLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLE 149
Query: 278 CPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDEPP--TATI 329
C YHGW++ +GKC K+P + KI C + +G+IW+W + P + +
Sbjct: 150 CLYHGWQFEGEGKCVKIPQLPA-DAKIPQAACVKTYEVRDSQGVIWVWMSLKTPPNVSKL 208
Query: 330 PCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFL 386
P + E + ELP +H +LL+NL+D AH P +H T AK L +
Sbjct: 209 PWFENFARPEFQDISTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEV 268
Query: 387 TPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI-SKPGKLEGQNTRQCATHLHQL 438
T + G G+W P + F PC++ + I K G++ + L
Sbjct: 269 TERTHRGFAGWWGREKDGSMPNFLRFEAPCVLQNNREIVDKNGEI---------NYFSGL 319
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQ-----QE 493
+C P+ + K+ L+ R S L V F ++ A +V +D+ + Q +E
Sbjct: 320 FLCRPTGQGKSMLIVRFGGTKRSPLAKV-FPKWYLHQNASKVFEQDMGFLSSQNEILLKE 378
Query: 494 RMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
+++ NL D YR W D G
Sbjct: 379 KVSTKELYLNLKSS-DTWVAEYRKWMDKAGHG 409
>gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 150/343 (43%), Gaps = 52/343 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
K W+P+ + D+ +D + F++ V++R + C ++ C HR L G + +G
Sbjct: 91 KEEWYPLYLTKDIPEDAPMGLTVFDKQLVLYRDGKDLLQCYEDRCPHRLAKLSEGQLVDG 150
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
R++C YHGW++ +GKC K+P R+ +K+ + +G++W+W P
Sbjct: 151 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVKTYEVKDSQGVVWVWMSHRTPPN-- 208
Query: 330 PCLLPPSGFEIHA-------EIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVP 380
P LP FE A + ELP +H +LL+NL+D AH P +H T AK
Sbjct: 209 PDKLP--WFENFARPGFRDTSTIHELPYDHSILLENLMDPAHVPISHDRTDWSAKREDAQ 266
Query: 381 SLVKFLTPAS--GLQGYW----DPYPID-MEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 433
L +T + G G+W D ++ + F PC++ QN R+
Sbjct: 267 PLCFKVTERTDRGFAGWWGREKDESLLNFLRFEAPCVL--------------QNNREIVD 312
Query: 434 ------HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
+ L +C PS + K+ L+ R S + + F ++ + A +V +D+
Sbjct: 313 KNGEKHYFTGLFLCRPSGQGKSMLIVRFGSTKRSPIAKL-FPEWYFHQNAGKVFEQDMGF 371
Query: 488 VLGQ-----QERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
+ Q +E++ NL D YR W D + G
Sbjct: 372 LSSQNEILMKEKVPTKELYLNL-RSSDTWVAEYRRWMDKVGHG 413
>gi|425856426|gb|AFX97753.1| chlorophyllide a oxygenase, partial [Auxenochlorella
protothecoides]
Length = 88
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 365 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 424
APFTHTSTFAKGW +P +VKF L G W PYPI M F PP MV+S IG+S+PG +E
Sbjct: 1 APFTHTSTFAKGWPIPDVVKFQA-TKLLTGNWQPYPITMSFAPPNMVVSLIGLSRPGVVE 59
Query: 425 -GQNTRQCATHLHQLHVCLPSSRKKTRLL 452
G + C HLHQLHVCLPS TRLL
Sbjct: 60 RGLSAESCKRHLHQLHVCLPSRPGHTRLL 88
>gi|78213302|ref|YP_382081.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
gi|78197761|gb|ABB35526.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
Length = 456
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 140/311 (45%), Gaps = 54/311 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 275
W+P+++ DL T F E VI+ + V + C HR PL G +NE G
Sbjct: 31 WWPISYVQDLDPKTPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRINEEGL 90
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIK--SLPCFEQEGMIWIWPGDEPPTATI 329
++CPYHGW + DG+C+++P +TQ N + + SLP ++G++++W G P A
Sbjct: 91 LECPYHGWSFDGDGQCQRVPQALENTQPNNRRSRCASLPTATRQGLLFVWMGA--PDAAD 148
Query: 330 PCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 381
P LP P + + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 149 PSQLPLVPALEDNPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGKRENAAP 207
Query: 382 LVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--HQ 437
+ +T ASG YW+ P + GKL Q+T A L H
Sbjct: 208 VEASITGEDASGFTAYWEEGP------------------RRGKLGAQSTTFHAPQLMWHD 249
Query: 438 LHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNED 484
L +P R + RL R F S + + ++ W +H + ED
Sbjct: 250 LTAKGFGRILTVVYAVPIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLED 309
Query: 485 LRLVLGQQERM 495
++ L QER+
Sbjct: 310 DQVFLHWQERV 320
>gi|307107873|gb|EFN56114.1| hypothetical protein CHLNCDRAFT_51738 [Chlorella variabilis]
Length = 553
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 140/370 (37%), Gaps = 68/370 (18%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+PVA + DL D PF F V++R G C Q+ C HR PL G V EG++
Sbjct: 87 WYPVAVAADLPTDRPHPFTLFGRQLVLWRDAAGAWRCFQDACPHRLAPLSEGRVVEGQLV 146
Query: 278 CPYHGWEYSTDGKCEKMP----------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
C YHGW + GKC ++P + R + P E G++W+WP P
Sbjct: 147 CSYHGWSFEGTGKCTRVPQAMDERSEAAACGSRRACAATQPTAEAAGLVWVWPDASPGAP 206
Query: 328 TIPCLLPPSGFEIHAEI------------------------VMELPIEHGLLLDNLLDLA 363
P +H ++ V E P +++N+LD
Sbjct: 207 EQAAAAP---LPVHPDLLAGGAGGGATPGSGSFVNIGGGWLVRECPYGFDTMIENILDPG 263
Query: 364 HAPFT-HTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----------MEFRPPCMVL 412
H + H + +VP VK S G+ +EFRPPC V
Sbjct: 264 HVMWAPHGLLGRREDAVPYAVKLQGEISLEGGFATSLGASSRKLEVQRRSLEFRPPCFVR 323
Query: 413 STI-----GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA------- 460
TI G G L + + L +P SR LL S A
Sbjct: 324 QTIAPGELGPGPTGWLPPCHAPSKGSSLVTCGYAVP-SRPGHCLLVTTSYAEAGSGAGGL 382
Query: 461 -SVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN----LPVGYDKLGVRY 515
+ L VP ++L + ++VL+ DL L+ GQ+ R+ W +P D V +
Sbjct: 383 RAALGLVP--RWLLHVYTQEVLDGDLILLHGQERRLEKAGGSWRSAFFMPTPSDGAVVAF 440
Query: 516 RLWRDALEKG 525
R W D + G
Sbjct: 441 RRWFDDMAGG 450
>gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa]
gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 38/333 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + D+ DD + + F++ V+++ G C ++ C HR L G + +GR++
Sbjct: 99 WYPLYLTKDVPDDAPLGLNVFDKQLVLYKDGQGELRCHEDRCPHRLAKLSEGQLIDGRLE 158
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIWIWPG-DEPPT-AT 328
C YHGW++ +GKC K+P QL N KI C E +G++W+W PP
Sbjct: 159 CLYHGWQFEGEGKCVKIP--QLPANAKIPQSACVKTYEVKESQGVVWVWMSLKTPPNFKK 216
Query: 329 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 384
+P GF+ + ELP +H +LL+NL+D AH P +H T +K +L
Sbjct: 217 VPWFENFARPGFQ-DTSTIHELPYDHSILLENLMDPAHIPISHDRTDWTSKREDAQALRF 275
Query: 385 FLTPAS--GLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
+T + G G W + F+ PC++ + I E + + +
Sbjct: 276 EVTERTHRGFAGRWGKEKDQKLRSFLRFQAPCVLSNDI--------EFADEKGVTQYFTG 327
Query: 438 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-RM 495
L +C P+ + K+ ++ R + + K +P ++ + A ++ +D+ + Q E M
Sbjct: 328 LFLCRPTGQGKSMIIVRFGATKRPQMAKVIP--KWYFHQNACKIFEQDMGFLSSQNEVLM 385
Query: 496 NNGANVWNLPVGY---DKLGVRYRLWRDALEKG 525
L + D YR W D + G
Sbjct: 386 KEKVPTKELYINLKSSDTWVAEYRKWMDKVGHG 418
>gi|239820364|ref|YP_002947549.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805217|gb|ACS22283.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 352
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 139/343 (40%), Gaps = 57/343 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + + DD + E V++R +G +++ C HR PL LG V EG
Sbjct: 4 KNTWY-VACTGNEIDDKPLGRKICGENLVLYRAAEGKATALEDFCPHRGAPLSLGRVVEG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E DGK MP ++R I+S P E+ G +WIWPGD P L
Sbjct: 63 KLVCGYHGLEMGCDGKTVAMPGQRVRGFPPIRSFPVIERYGFVWIWPGD-------PALA 115
Query: 334 PPSGFE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------------- 369
P+ + + + ++ L++DNL+DL H + H
Sbjct: 116 DPAKLHHLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPT 175
Query: 370 ----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTI 415
TS F + S P + + L D P+D F PP VL +
Sbjct: 176 TTKTEGDQVTTSRFMENISAPPFWRMALRGNHLA---DDVPVDRWQICRFTPPSHVLIEV 232
Query: 416 GISKPGKLEGQNTRQCATHLHQLHV--CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLW 473
G++ GK G A + + V P + + M+ +F H +
Sbjct: 233 GVAHAGK--GGYDADPAHKVSSIVVDFITPETETSHWYFWGMARNFQP---HDKALTASI 287
Query: 474 RHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
R ++ +EDL ++ QQ + N L + D GV+ R
Sbjct: 288 REGQGKIFSEDLEMLESQQRNLLAHPNRSLLKLNIDSGGVQSR 330
>gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa]
gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa]
Length = 556
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 34/297 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P+ + D+ DD + F++ V+++ G C ++ C HR L G + +GR++
Sbjct: 106 WYPLYLTKDVPDDAPLGLTVFDKQVVLYKDGQGELRCFEDRCPHRLAKLSEGQLIDGRLE 165
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCF------EQEGMIWIW--PGDEPPTAT 328
C YHGW++ +G C K+P QL N KI C E +G++W+W +P
Sbjct: 166 CLYHGWQFEGEGNCVKIP--QLPANAKIPQSACVKTYEVRESQGVVWVWMSSKSQPNINK 223
Query: 329 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--TSTFAKGWSVPSLVK 384
+P GF+ + V ELP +H +LL+NL+D AH P +H T AK + L
Sbjct: 224 LPWFENFARPGFK-DSSAVHELPYDHSILLENLMDPAHIPISHDRTDLSAKRENAQPLRF 282
Query: 385 FLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
+T + G G+W P + F PC VLS E + + +
Sbjct: 283 EVTERTDRGFAGWWGGGDAQTLPNFLRFEAPC-VLSN-------NREFIDEKGVKQYFSG 334
Query: 438 LHVCLPSSRKKTRLLYRM-SLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
L +C P+ + K+ L+ R + +P ++ + V +D+ + Q E
Sbjct: 335 LFLCRPTGQGKSMLIVRFGGTAMPQIANWIP--EWFFHQRGCTVFEQDMGFLSSQNE 389
>gi|160896799|ref|YP_001562381.1| vanillate monooxygenase [Delftia acidovorans SPH-1]
gi|160362383|gb|ABX33996.1| Vanillate monooxygenase [Delftia acidovorans SPH-1]
Length = 363
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 144/346 (41%), Gaps = 52/346 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
+T KN W+ A S +++D + C E +R + GI V++ C HR PL LG
Sbjct: 2 STFPKNTWYVAATSDEIQDKPLGRRICGERI-AFYRAQHGI-AAVEDFCPHRGAPLSLGF 59
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTA 327
V EG++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD+ A
Sbjct: 60 VCEGKLVCGYHGLEMGCDGKTIAMPGQRVRGFPEIRSYPVEERHGFIWVWPGDKALADAA 119
Query: 328 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------------- 369
IP L E + + + ++ L++DNL+DL H + H
Sbjct: 120 LIPKLPWHDNPEWAYGGGMFHIQADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTE 179
Query: 370 -----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLST 414
TS F P K ++GL D P+D F PP VL
Sbjct: 180 TRGEGADVEVVTSRFMNDIPAPPFWKMALRSNGLA---DDVPVDRWQVCRFTPPSHVLIE 236
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQ 470
+G++ G + + + P + + + M+ F A V +
Sbjct: 237 VGVAHAGHGGYDAPDEHKVYSMVVDFITPETEESMWYFWGMARRFNPGDAEVTDRI---- 292
Query: 471 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
R ++ +EDL+++ QQ ++ + L + D GV+ R
Sbjct: 293 ---REGQHKIFSEDLQMLELQQRNLSAHPDRKLLKLNIDAGGVQSR 335
>gi|428210223|ref|YP_007094576.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428012144|gb|AFY90707.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 364
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 134/320 (41%), Gaps = 61/320 (19%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+PV ++ L+ ++P +++ +FR DG + + CAH+ LH G +
Sbjct: 24 DYWYPVGWANKLQPGHIMPVTIWKQAIAVFRDTDGQLHALDDACAHKGVALHKGQIQGKH 83
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP- 330
+ CPYHGWE++ G+C K+P + +L +++S P E+ +IWI+PGD +IP
Sbjct: 84 LLCPYHGWEFNGAGQCVKIPYLPETHKLPCAQVRSYPVREKYNLIWIFPGDASLATSIPL 143
Query: 331 ----------CLLP--PSGFEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
CL+ P+ F+ H I E + + HG L NL +G
Sbjct: 144 PEIPEFDDPDCLMVPIPAHFQAHFTICNENTMDVFHGFLHKNL---------------QG 188
Query: 377 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
W P L T S + D ++ +G+S G + TR H
Sbjct: 189 WFDPVLTSLKTTESSVHA-------DYRVSYKGVMTKILGLSDRG--DEVTTRTVTLHYQ 239
Query: 437 QLH-----------------VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ-YLWRHFAE 478
H + ++ T + R++L V P + Y+WR
Sbjct: 240 YPHYHSSLEGVSSLYLMRSPMGATETKSFTLMFLRLNLPKWLVQPFKPLISAYIWRFLFS 299
Query: 479 QVLNEDLRLVLGQQERMNNG 498
+ L++D+ ++ +Q +N
Sbjct: 300 KFLDQDIEMMESEQRTYSNN 319
>gi|412985453|emb|CCO18899.1| cell death suppressor protein Lls1-like [Bathycoccus prasinos]
Length = 598
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 55/320 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-----DGIP--GCVQNTCAHRACPLHLGS 270
W+P+AF DL+DD F P V ++ K D P CV + C HR PL G
Sbjct: 113 WYPIAFECDLEDDAPYAFTLLGTPLVFWKNKKSGASDDAPEYSCVADMCPHRLAPLSEGR 172
Query: 271 VNE-GRIQCPYHGWEY-STDGKCEKMP---------STQLRNVKIKSLPCFEQ--EGMIW 317
+N+ G I+C YHGW + GKC +P T L + + + P + + +G++W
Sbjct: 173 INDKGEIECGYHGWTFEGKSGKCTSIPQLGSEGPAVDTALNSPRACATPYYTKVAQGVLW 232
Query: 318 IWPGDEPPTATIPCLLPPSGFE-------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
+P T T+ L P ++ ++ +LP+++ LL+N++D++H PFTH
Sbjct: 233 CYPTKIDGTKTVDDLPPLPLIPELDDPMCVYQDVFRDLPMDYSTLLENVMDVSHVPFTHH 292
Query: 371 STFAKGWSVPSLVKFLTPA------SGLQGYWDPYPID-------MEFRPPCMVLSTIGI 417
++ K + +V LT +G G W P EF+ P ++ T+
Sbjct: 293 NSVGKRENATPVVLELTTEDKKVSRNGFTGEWKEGPRKGKYGTQYTEFQAPALMRHTLRT 352
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRH 475
+ L + +P + K RL+ R F + L F + + H
Sbjct: 353 DQFTTL-------------TVVYAVPIAPGKCRLIARFPFIFKAALPRKLFGLFPKWYTH 399
Query: 476 FAEQVLNEDLRLVLGQQERM 495
+ + ED ++ L +QER+
Sbjct: 400 TNQNAILEDDQIFLHKQERL 419
>gi|333916755|ref|YP_004490487.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
gi|333746955|gb|AEF92132.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
Length = 363
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 144/346 (41%), Gaps = 52/346 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
+T KN W+ A S +++D + C E +R + G+ V++ C HR PL LG
Sbjct: 2 STFPKNTWYVAATSDEIQDKPLGRRICGERI-AFYRAQHGV-AAVEDFCPHRGAPLSLGF 59
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDE--PPTA 327
V EG++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD+ A
Sbjct: 60 VCEGKLVCGYHGLEMGCDGKTIAMPGQRVRGFPEIRSYPVEERHGFIWVWPGDKALADAA 119
Query: 328 TIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------------- 369
IP L E + + + ++ L++DNL+DL H + H
Sbjct: 120 LIPKLPWHDNPEWAYGGGMFHIQADYRLMIDNLMDLTHETYVHASSIGQAEIDETPCKTE 179
Query: 370 -----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLST 414
TS F P K ++GL D P+D F PP VL
Sbjct: 180 TRGEGADVEVVTSRFMNDIPAPPFWKMALRSNGLA---DEVPVDRWQVCRFTPPSHVLIE 236
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQ 470
+G++ G + + + P + + + M+ F A V +
Sbjct: 237 VGVAHAGHGGYDAPDEHKVYSMVVDFITPETEESMWYFWGMARRFNPGDAEVTDRI---- 292
Query: 471 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
R ++ +EDL+++ QQ ++ + L + D GV+ R
Sbjct: 293 ---REGQHKIFSEDLQMLELQQRNLSAHPDRKLLKLNIDAGGVQSR 335
>gi|325277574|ref|ZP_08143162.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097289|gb|EGB95547.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. TJI-51]
Length = 355
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 138/338 (40%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG+ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKI-VFYRGQQNRVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKAFAVVERHGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWADNEEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P S + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAAAQHKAASIVVDFITPESDTSIWYFWGMARNFAA---HDQNLTADIREGQGKI 294
Query: 481 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ+ + N G N+ L + D GV+ R
Sbjct: 295 FSEDLEMLERQQQNLLANPGRNLLKLNI--DAGGVQSR 330
>gi|33865393|ref|NP_896952.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
WH 8102]
gi|33632562|emb|CAE07374.1| cell death suppressor protein Lls1 homolog [Synechococcus sp. WH
8102]
Length = 455
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 141/320 (44%), Gaps = 54/320 (16%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPL 266
+P + W+P+++ DL F E VI+ + G V + C HR PL
Sbjct: 7 RPMHPTWTEQWWPISYLQDLDPQRPNRFTLLERDLVIWWDQSGESWRVFPDVCPHRLVPL 66
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMP----STQ--LRNVKIKSLPCFEQEGMIWIW 319
G +N+ G+++CPYHGW + DG+C ++P +TQ R + SLP +G++++W
Sbjct: 67 SEGRINDAGQLECPYHGWSFDGDGQCRQIPQALENTQPDSRRSRCASLPTASAQGLLFVW 126
Query: 320 PGDEPPTATIPCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
G P + P LP P + + + +LP++ LL+N+LD++H PFTH
Sbjct: 127 MGS--PDSADPEQLPLVPALEENPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHK 183
Query: 372 TFAKGWSVPSLVKFLTP--ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
T K + + +T ASG + YW+ P + GKL Q+T
Sbjct: 184 TVGKRENAAPVEATITAEDASGFKAYWEEGP------------------RRGKLGAQSTT 225
Query: 430 QCATHL--HQLHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-R 474
A L H L +P R + RL R F S L + ++ W +
Sbjct: 226 FLAPQLMWHDLTAKGFGRILTVVYAVPIRRGECRLFARFPFQFQSALPRLLIGLRPRWLQ 285
Query: 475 HFAEQVLNEDLRLVLGQQER 494
H + ED ++ L QER
Sbjct: 286 HIGNHKVLEDDQVFLHWQER 305
>gi|392950448|ref|ZP_10316003.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|392950635|ref|ZP_10316190.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859410|gb|EIT69938.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859597|gb|EIT70125.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
Length = 359
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 132/318 (41%), Gaps = 39/318 (12%)
Query: 210 YNTR-LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
YN + L N W+ A S++L+ + + + P V++R +DG + + C HR PL +
Sbjct: 2 YNGKYLLNTWYVAALSSELESEKLFARTLLDTPVVMYRQRDGAAVALHDRCPHRFSPLSM 61
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPP 325
G + + CPYHG ++T G+C P K+++ P E+ G IWIW G+ P
Sbjct: 62 GHRDGDNVVCPYHGLRFNTAGQCVHNPHGNGAIPAAAKVRTFPLIERYGFIWIWMGEVPA 121
Query: 326 TAT-IPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 378
A+ +P P P+G A M P + L+ DN++DL+H H + +G
Sbjct: 122 DASALPDYGPIDRGHPNGV---AHTYMRRPCHYELITDNVMDLSHVDHLHGEIISTRGQL 178
Query: 379 VPSLVKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGI 417
P + K + +W P P + + +R P + TIG
Sbjct: 179 SPKIPKLQEADGEISVHWQWEQTPPIMIFNAFLPEPGASARHFVRVAWRAPTHIQLTIGA 238
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
++ T T + LH C P + T + + M+ H
Sbjct: 239 TQDSG--APLTHDACTSQYDLHTCTPETDSTTHYFFATRRNHFEEDAEYNRMKITGMH-- 294
Query: 478 EQVLNEDLRLVLGQQERM 495
+ +NED ++ Q+RM
Sbjct: 295 DAFVNEDGPVLDAVQKRM 312
>gi|17231846|ref|NP_488394.1| hypothetical protein alr4354 [Nostoc sp. PCC 7120]
gi|17133490|dbj|BAB76053.1| alr4354 [Nostoc sp. PCC 7120]
Length = 443
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 149/352 (42%), Gaps = 63/352 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR--GKDGIPGCVQNTCAHRACPLHLGSVNE-- 273
W+PV+ DL P VI++ +G + + C HR PL G V++
Sbjct: 11 WYPVSPIEDLDPKRPTPVTLLGIRLVIWKPQSSEGFRIFI-DQCPHRLAPLSEGRVDDKT 69
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------SLPCFEQEGMIWIWP----- 320
G + C YHGW++ +G C +P + + K SLP +Q ++W+WP
Sbjct: 70 GNLMCSYHGWQFDPEGVCTHIPQAENPEIVTKNQKDFCVISLPVRQQNDLLWVWPDVKSQ 129
Query: 321 --GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------- 369
D+ P P + GF + + V +L + L++N+ D +H PF H
Sbjct: 130 ELADQTPLPLSPQVDASKGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREQ 188
Query: 370 --TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
+ + S P L++ + + + F PPC + I I GK G
Sbjct: 189 ARATPISIMQSTPGLIEAVADGR--------FKAKITFEPPCRLEYAISIGNDGKKVGLV 240
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDL 485
T CLP S K+R++ + +FA +L H+ W H + VL+ D+
Sbjct: 241 T-----------YCLPVSPGKSRIVAQFPRNFAKILYHL--TPRWWDHVKTRNLVLDGDM 287
Query: 486 RLVLGQ----QERMNNGA--NVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
L+ Q QER + + V+ +P D+L + +R W D +G QLP+
Sbjct: 288 ILLKQQEHFLQERQLSASWKTVYKMPTSADRLVIEFRKWFDKYCEG--QLPW 337
>gi|427702133|ref|YP_007045355.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427345301|gb|AFY28014.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 435
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 24/298 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE 273
+ WFPVA+ DL F +E V++ + G + + C HR PL G +N
Sbjct: 7 RQHWFPVAYLRDLDPARPTAFTLLDEDLVLWWDRAGQLWRAFADVCPHRLVPLSQGRINA 66
Query: 274 G-RIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
G ++CPYHGW ++ DG C +P S + ++ E +G+++++ G+E
Sbjct: 67 GGELECPYHGWSFAGDGHCTAIPQAEPGASPSAVRSRCRAYATAEAQGLLFVFAGEEADA 126
Query: 327 ATIPCLLPP----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
A +P L P G+ + + +LP++ LL+N+LD++H PFTH T K + +
Sbjct: 127 AAVPLPLVPVLEEPGWFVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAAPV 185
Query: 383 VKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 439
V +T +SG +G+ W+ P R + + + PG + T + +
Sbjct: 186 VATIT-SSGPEGFTALWEEGP-----RRGKLGSQSTTYAAPGLMWHDLTAPSFARILTVV 239
Query: 440 VCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAEQVLNEDLRLVLGQQERM 495
P R + RL R F S + + ++ W +H A + ED ++ L QER+
Sbjct: 240 YATPIRRGECRLFARFPFQFESRLPPLLLGLRPRWLQHIANHTVLEDDQVFLHWQERV 297
>gi|220908310|ref|YP_002483621.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864921|gb|ACL45260.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 338
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 83/167 (49%), Gaps = 9/167 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK FW+PV L+D F +EP V++ ++G P Q+ C HR+ L +G V E
Sbjct: 10 LKRFWYPVLPIAQLQDGPKA-FTLLDEPLVLWLDQEGKPAATQDRCCHRSAKLSIGQVIE 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATI 329
G I+CPYHGWE+ G C ++P R + +I + PC E+ G +W+ EPP I
Sbjct: 69 GCIRCPYHGWEFDPQGACVRVPQHPDRPIPSGYRINAYPCQERYGYVWV--CLEPPVQDI 126
Query: 330 PCLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P + + + L++N LD+AH PF H TF
Sbjct: 127 PEFAEATDPNYRLIPGFWETWQCSSLRLMENTLDIAHIPFVHNQTFG 173
>gi|403731430|ref|ZP_10949288.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
gi|403202209|dbj|GAB93619.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
Length = 371
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 12/169 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N W+ A+ ++ +V +P ++R DG P + + C HR PL +G+ V
Sbjct: 19 NAWYVAAWDHEVGRSEIVARTIAGKPMALYRTTDGRPVALADACWHRLAPLSMGTLVGSD 78
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QCPYHG ++++ G+C KMP+ + N + S P E+ IW+WPGD PT P
Sbjct: 79 GVQCPYHGLQFNSAGRCTKMPAQETINPSAMVASYPVVERHRFIWVWPGD--PTQADPST 136
Query: 333 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+P F++ + +++ + L+LDNL+DL H F H+S+ +
Sbjct: 137 IPDM-FQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQ 184
>gi|115359337|ref|YP_776475.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284625|gb|ABI90141.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 373
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 104/245 (42%), Gaps = 40/245 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N LKN W+ VA + D D + EP V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDDIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 329
V +G + C YHG E +GK MP ++ I+S P EQ G IW+WPGD +
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVEQYGFIWVWPGDA--SEAD 130
Query: 330 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------- 369
P LP + H + + ++ L++DNL+DL H + H
Sbjct: 131 PAKLPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAAPK 190
Query: 370 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIG 416
TS F + P + +GL D P+D F PP V+ +G
Sbjct: 191 TTANGDEVVTSRFMQNVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVG 247
Query: 417 ISKPG 421
++ G
Sbjct: 248 VAHAG 252
>gi|170698591|ref|ZP_02889660.1| Vanillate monooxygenase [Burkholderia ambifaria IOP40-10]
gi|170136525|gb|EDT04784.1| Vanillate monooxygenase [Burkholderia ambifaria IOP40-10]
Length = 373
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
+ P + N LKN W+ VA + D D + EP V +R DG +++ C HR
Sbjct: 7 TAPKETMNVFLKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRG 65
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 322
PL LG V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD
Sbjct: 66 APLSLGFVRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFIWVWPGD 125
Query: 323 EPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------- 369
+ P LP + H + + ++ L++DNL+DL H + H
Sbjct: 126 A--SEADPARLPALSWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKE 183
Query: 370 ----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPC 409
TS F + P + +GL D P+D F PP
Sbjct: 184 IDEAAPKTTANGDEVVTSRFMQNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPS 240
Query: 410 MVLSTIGISKPG 421
V+ +G++ G
Sbjct: 241 HVMIEVGVAHAG 252
>gi|148555930|ref|YP_001263512.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501120|gb|ABQ69374.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 361
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ A S ++ ++ + P IFR G+ + + C HR PL G+V
Sbjct: 4 RNCWYVAAMSHEIAPGAVISRMICDVPMAIFRSLGGVASILLDRCPHRLYPLSEGTVEAH 63
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP-- 330
++C YHG ++ DG C ++PS N + + P E G+IW+WPGD A+ P
Sbjct: 64 GLRCAYHGLVFAGDGGCREIPSQSEIPANACVTAYPARESHGLIWVWPGDAALAASTPLP 123
Query: 331 ---------------CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
CL P S + + V+ L + L +DNLLDL H F H TF
Sbjct: 124 AFETGEGYLAGLDFSCLDPSSLWGVAGPHVIHLDANYMLAVDNLLDLTHTAFVHAKTF 181
>gi|428211927|ref|YP_007085071.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|428000308|gb|AFY81151.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 469
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 150/363 (41%), Gaps = 36/363 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRA 263
G P+ ++ W+PV + DL ++ F I+ K G ++ C HR
Sbjct: 20 GGNDPHRFDVREVWYPVYYLQDLDKSKIMRFTLLGVDLAIWWDKTGQSWRAFEDKCPHRL 79
Query: 264 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 315
PL G +NE G I+CPYHGW +S GKCE +P + Q +++ P E +G+
Sbjct: 80 APLSEGRINEQGWIECPYHGWAFSATGKCETIPQQNEGGKAEQSERACVRNFPTAEHQGL 139
Query: 316 IWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
++++ G+ P A +P + P P + + +LP + LL+N+LD +H P+T
Sbjct: 140 LFVYAGN-PENAKQTKVPLIDPLEESPDKW-VCLNTFRDLPYDALTLLENVLDASHIPYT 197
Query: 369 HTSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
H T + S V A+G QG+ W+ P R + PG +
Sbjct: 198 HHRTVGNR-ANASKVDLEVIAAGKQGFEGLWEEGP-----RKGTLGSQQTHFIAPGLMWH 251
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL--KHVPFMQYLWRHFAEQVLNE 483
T + + P + + RL R FAS + + + H + + E
Sbjct: 252 DLTSKQFGRTMTVVYATPIRKGECRLFARFPFQFASKVPATFIKLTPQWYSHIGQNAILE 311
Query: 484 DLRLVLGQQERMNNGAN-------VWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
D ++ L QER A + LP D + +R W + + P++
Sbjct: 312 DDQIFLYHQERYLEAAGGSEKIAKAFYLPTKADLFVLAFRKWVNEYDADPFPGESFPPLR 371
Query: 537 TRK 539
+R+
Sbjct: 372 SRE 374
>gi|347528238|ref|YP_004834985.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136919|dbj|BAK66528.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 359
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 113/278 (40%), Gaps = 47/278 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ AF+ ++ D + ++ ++FR DG + + C HR PL G V
Sbjct: 5 LKNVWYAAAFADEISDKPLAR-TLLDQEIMLFRKGDGTAAMLADRCPHRFAPLSGGKVIG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
IQCPYHG ++ G+C P + L+ I + P E+ G++W WPG+ P
Sbjct: 64 DEIQCPYHGLRFNAQGECTHNPHVKGGGALKAANITAWPVMEKYGILWFWPGN--PDLAE 121
Query: 330 PCLLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
P LP P F + + ++ + + L++DNLLDL+HA + H +S L
Sbjct: 122 PSALPRVEFLERPDAFSV-VKGLLHVKGNYELVVDNLLDLSHASYIHPQFGGSAYSPEQL 180
Query: 383 VKFLT-----------------------PASGLQGYWDPYPI----DMEFRPPCMVLSTI 415
+ T P+ L GY P+ M + PP M+
Sbjct: 181 LAATTQKLERRENSIVNHRVRSGLAAPAPSQALFGYDAETPVYTKSTMTWYPPSML---- 236
Query: 416 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
G + H+ QLH P + + +
Sbjct: 237 -DFDAGSWAMDEAEEDGAHIPQLHFITPETEFTSHYFF 273
>gi|298491713|ref|YP_003721890.1| pheophorbide a oxygenase ['Nostoc azollae' 0708]
gi|298233631|gb|ADI64767.1| Pheophorbide a oxygenase ['Nostoc azollae' 0708]
Length = 442
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 45/345 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+P++ DL VP VI++ +D V + C HR PL G V++ G
Sbjct: 11 WYPLSPVEDLDSPRPVPVTLLGIRLVIWKPRDADNYRVFLDQCPHRLAPLSEGRVDDKTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 325
+ C YHGW++ G C +P + +N + SLP ++ ++W+WP +
Sbjct: 71 NLMCSYHGWQFDGRGICTHIPQAENPQLVAKNQQNFCVLSLPVRQENDLLWVWPDAKSAE 130
Query: 326 -TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 376
AT P L P GF + + + +L + L++N+ D +H PF+H K
Sbjct: 131 LAATTPLPLSPHIDTNKGF-VWSSYIRDLEYDWQTLVENVADPSHVPFSHHGVQGNRDKA 189
Query: 377 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
S+P V T P + F+PPC++ I I K G
Sbjct: 190 TSIPLNVVQSTINLIEVSISKALPTTITFQPPCLLEYAISIGDTDKKLG----------- 238
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRL------V 488
+ C+P S K+R++ + + +FA L ++ + W H + VL+ D+ L +
Sbjct: 239 LIVYCVPVSPGKSRIVAQFTRNFAKNLHYL--IPRWWEHIKIRNLVLDGDMMLLHQQEYL 296
Query: 489 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
L Q++ + + LP D+L + +R W D G QLP+ K
Sbjct: 297 LQQRQESESWKTAYKLPTSADRLVIEFRTWFDKYCHG--QLPWSK 339
>gi|145296350|ref|YP_001139171.1| hypothetical protein cgR_2265 [Corynebacterium glutamicum R]
gi|417971133|ref|ZP_12612061.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
gi|140846270|dbj|BAF55269.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044612|gb|EGV40288.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
Length = 376
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 154/381 (40%), Gaps = 47/381 (12%)
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 255
L ++L + + P+ N W+ A+ ++ + +P ++R KDG +
Sbjct: 3 LSERNLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 256 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 312
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 313 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPF 367
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 368 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 401
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 402 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPESDRSSHYFWAFMRNYR- 295
Query: 462 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 519
L+ L R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 296 -LESQTITTQL-RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 520 DALEK-GAKQLPFMKPMQTRK 539
+AL K G +P P T K
Sbjct: 353 EALSKEGRLDIPTTFPRATPK 373
>gi|113477251|ref|YP_723312.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168299|gb|ABG52839.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 443
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 55/348 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN------TCAHRACPLHLGSV 271
W+P++ DL + V VI++ P QN C HR PL G V
Sbjct: 11 WYPLSPVEDLDPEIPVSITLLGMGLVIWK-----PRYSQNYQVFLDVCPHRLAPLSEGRV 65
Query: 272 NE--GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPG 321
+E G + C YHGW+++++G C +P + +N + SLP ++ ++W+WP
Sbjct: 66 DEKTGNLMCSYHGWQFNSEGICTDIPQAENQEIIEKNRQNFCVTSLPVRQENDLLWVWPD 125
Query: 322 DEPP--TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ A+ P L P GF + + V +L + L++N+ D +H PF+H
Sbjct: 126 RKTADLAASTPLPLSPQIDAEKGF-VWSSYVRDLEYDWETLVENVADPSHVPFSHHGVQG 184
Query: 375 -KGWSVPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
+ + P +++ L + P + F PPC + I I K GK G T
Sbjct: 185 NRNKARPIVMEILQSTINVIKVSISRGLPTIITFEPPCRLEYEISIGKDGKKIGLVT--- 241
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRL-- 487
CLP S K+R++ + +FA ++ + W H + VL+ D+ L
Sbjct: 242 --------YCLPVSPGKSRIVAQFPRNFAKIIHRL--TPRWWDHIQNRNLVLDGDMVLLN 291
Query: 488 ----VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
+L Q++ + + LP D+L + +R W D G QLP+
Sbjct: 292 QQEYLLQQKQSSKSWKTAYQLPTSADRLVIEFRNWFDKYSHG--QLPW 337
>gi|427734356|ref|YP_007053900.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
gi|427369397|gb|AFY53353.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
Length = 445
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 42/336 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE--GR 275
W+PV+ D+ VI++ K + C HR PL G V+E G
Sbjct: 11 WYPVSPVEDIDPKKPTAVTVLGLRLVIWKPKLSDYRVFLDKCPHRLAPLSEGRVDEKTGN 70
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ C YHGWE+ +G C ++P + +N+ SLP ++ ++W+W P
Sbjct: 71 LMCSYHGWEFDAEGICTRIPQAENPQLVTKNQKNLCAVSLPVRQENDLLWVWLDANSPQL 130
Query: 328 TIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
LP S GF + + V +L + L++N+ D +H PFTH + +
Sbjct: 131 ANDTPLPLSPQVDANKGF-VWSSYVRDLEYDWQTLVENVADPSHVPFTHHGVQGNREQAS 189
Query: 380 PSLVKFLTPASGLQGYWDP--YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
P +++ + + L + + F PPC + TI + GK G T
Sbjct: 190 PVILQIVKSTANLIEATSSGRFQTTITFEPPCRLEYTIRVGDEGKQLGLVT--------- 240
Query: 438 LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRLVLGQ---- 491
C+P+ K+R++ + + +FA+ L + + W H +VL+ D+ L+ Q
Sbjct: 241 --YCIPTYPGKSRIVAQFTRNFATNLNRI--IPRWWSHIKIRNKVLDGDMILLHQQEHFL 296
Query: 492 QERMNNGA--NVWNLPVGYDKLGVRYRLWRDALEKG 525
QER + + + LP D+L + +R W D +G
Sbjct: 297 QERQSQESWKTAYQLPTSADRLIIEFRNWFDKYSQG 332
>gi|418243964|ref|ZP_12870392.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
gi|354511995|gb|EHE84896.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
Length = 376
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 152/381 (39%), Gaps = 47/381 (12%)
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 255
L + L + + P+ N W+ A+ ++ + +P ++R KDG +
Sbjct: 3 LSERKLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 256 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 312
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 313 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPF 367
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 368 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 401
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 402 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPDSDRSSHYFWAFMRNYRQ 296
Query: 462 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 519
+ + R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 297 ESQTITTQL---RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 520 DALEK-GAKQLPFMKPMQTRK 539
+AL K G +P P T K
Sbjct: 353 EALSKEGRLDIPTTFPRATPK 373
>gi|260434502|ref|ZP_05788472.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
gi|260412376|gb|EEX05672.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
Length = 465
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 28/298 (9%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 275
W+P+++ DL + F E VI+ + V + C HR PL G +NE G
Sbjct: 40 WWPISYVQDLDPNQPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRINEEGL 99
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIK--SLPCFEQEGMIWIWPGDEPPTATI 329
++CPYHGW + G+C+++P +TQ N + + SLP +G++++W G P A
Sbjct: 100 LECPYHGWSFDGGGQCQRVPQALDNTQPNNRRSRCASLPTATGQGLLFVWMG--APDAAD 157
Query: 330 PCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 381
P LP P + + + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 158 PSQLPLVPALEDNPDSWTVQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHRTVGKRKNAAP 216
Query: 382 LVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 439
+ +T ASG YW+ P R + + + P + T + + +
Sbjct: 217 VEASITGEDASGFTAYWEEGP-----RRGKLGAQSTTFNAPQLMWHDLTAKGFGRILTVV 271
Query: 440 VCLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNEDLRLVLGQQERM 495
+P R + RL R F S + + ++ W +H + ED ++ L QER+
Sbjct: 272 YAVPIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERV 329
>gi|19553582|ref|NP_601584.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum ATCC 13032]
gi|62391226|ref|YP_226628.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 13032]
gi|21325154|dbj|BAB99776.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenases [Corynebacterium glutamicum ATCC 13032]
gi|41326566|emb|CAF21048.1| PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT [Corynebacterium
glutamicum ATCC 13032]
gi|385144481|emb|CCH25520.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum K051]
Length = 376
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 153/381 (40%), Gaps = 47/381 (12%)
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 255
L + L + + P+ N W+ A+ ++ + +P ++R KDG +
Sbjct: 3 LSERKLTTTAKILPHPL---NAWYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVAL 59
Query: 256 QNTCAHRACPLHLGS-VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQ 312
+ C HR PL G V IQCPYHG EY++ G+C KMP+ + N + S P E
Sbjct: 60 ADACWHRLAPLSKGKLVGTDGIQCPYHGLEYNSAGRCMKMPAQETLNPSAAVNSYPVVEA 119
Query: 313 EGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPF 367
+W+W GD PT P +P H E + + L+LDNL+DL H F
Sbjct: 120 HRFVWVWLGD--PTLADPTQVPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEF 177
Query: 368 THTSTFAKG-WSVPSLVKFLTPAS-------------------------GLQGYWDPYPI 401
H+S+ + S V T S G +G D + I
Sbjct: 178 VHSSSIGQDELSESEFVVTHTEDSVTVTRWMHDIDAPPFWQKNMNDKFPGFEGKVDRWQI 237
Query: 402 DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
+ + P + +G++K G + R + + ++ P S + + + ++
Sbjct: 238 -IHYYYPSTICIDVGVAKAGTGAQEGDRSQGVNGYVMNTITPDSDRSSHYFWAFMRNYR- 295
Query: 462 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 519
L+ L R V ED ++ QQ+ + N ++L + + VR R+
Sbjct: 296 -LESQTITTQL-RDGVSGVFKEDEDMLTAQQDAIDANTDYEFYSLNIDAGGMWVR-RILE 352
Query: 520 DALEK-GAKQLPFMKPMQTRK 539
+AL K G +P P T K
Sbjct: 353 EALSKEGRLDIPTTFPRATPK 373
>gi|428220844|ref|YP_007105014.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427994184|gb|AFY72879.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 344
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 214 LKNFWFPV----AFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
LKNFW+ + + ST K T + D V++RG +G + C HR L G
Sbjct: 22 LKNFWYGIEHSASVSTKPKSITFMGHDL-----VLYRGSNGQAIALDGRCVHRGTDLGAG 76
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEP 324
V I CPYHGW+Y ++G C +P+ Q R K++S P E+ G+IW++ GD P
Sbjct: 77 WVEGDCIHCPYHGWKYESNGACSLIPANQPGVVIPRRAKLQSYPVQEKYGLIWLFWGDLP 136
Query: 325 PTA--TIPCL--LPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---- 375
P +IP L +G+ IH + E + ++ N +D+AHAPF H S F +
Sbjct: 137 PEECPSIPILPEFDQAGWRSIHGDFNWEG--HYSRVIANTIDMAHAPFVHASAFGRKDSP 194
Query: 376 ----------GWSVPSLVKFLT-PASGLQGYWDPYPIDMEFR 406
WS + F T PA L+ P D FR
Sbjct: 195 AVQAYKLESGAWSASGFITFETKPAYSLKFILGNDPPDGIFR 236
>gi|326334247|ref|ZP_08200469.1| vanillate O-demethylase oxygenase subunit [Nocardioidaceae
bacterium Broad-1]
gi|325947942|gb|EGD40060.1| vanillate O-demethylase oxygenase subunit [Nocardioidaceae
bacterium Broad-1]
Length = 366
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 145/349 (41%), Gaps = 48/349 (13%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + P V++R +D P + + C HR PL +G V
Sbjct: 25 NAWYVAAWDREVTRKPSA-VQVADRPLVLYRTEDNRPVALADACWHRLAPLSMGEVIGDD 83
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
I+CPYHG Y+ G+C MP+ + N + S P E+ +W+W GD P A P L+
Sbjct: 84 IRCPYHGIVYNPAGRCVSMPAQESLNPSALVPSFPVVERHRFVWVWVGD--PLAANPDLI 141
Query: 334 P------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG----------- 376
P + E + EL + L++DNL+DL H F HTS+ G
Sbjct: 142 PDMHQMDDPAWAGDGETI-ELDCNYQLVMDNLMDLTHEEFLHTSSIGGGGLSESDFTVEH 200
Query: 377 ---------W-----SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
W +VP + + G G D + + +E+ P ++ +G++K G
Sbjct: 201 DGNKVRLSRWMIDIPAVPFMKAQMRAQHGYDGNVDRWQL-IEYGFPSVIRIDVGVAKTGT 259
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRL--LYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
+ R + ++ P S KT+ + + D S L Q + V
Sbjct: 260 GAPEGDRSQGINGFVMNAITPVSATKTKYHWAWMRNYDLQSQLLTSQIKQGI-----SNV 314
Query: 481 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 527
ED ++ QQ+ + N +NL + + +R R+ ALE +
Sbjct: 315 FKEDTAMLQAQQQAIESNPDYEFYNLNIDGGGMWIR-RILERALEAEGR 362
>gi|271967869|ref|YP_003342065.1| vanillate demethylase oxygenase subunit [Streptosporangium roseum
DSM 43021]
gi|270511044|gb|ACZ89322.1| vanillate demethylase oxygenase subunit [Streptosporangium roseum
DSM 43021]
Length = 380
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 14/173 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 272
LKNFW+ V F + C + +VI+R +DG C+ + C HR L +G++
Sbjct: 2 LKNFWYAVEFGHAVGRRPR-KVTCLGQDFVIWRRRDGRIACLSDLCVHRGGALSMGTLAG 60
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD----- 322
+ I CPYHGWEY DG C K+P+ ++ + P E+ GM+W + GD
Sbjct: 61 DDSIACPYHGWEYGPDGGCVKIPANPPGRGIPSKARVDAYPVIERYGMVWAFLGDLPEEE 120
Query: 323 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
PP IP P+ ++ E ++ E L+N++D AH PF H + F
Sbjct: 121 RPPIPHIPQHEDPAFRAVYWETTVDANYER--TLENVVDAAHTPFVHGTAFGN 171
>gi|171317347|ref|ZP_02906542.1| Vanillate monooxygenase [Burkholderia ambifaria MEX-5]
gi|171097488|gb|EDT42327.1| Vanillate monooxygenase [Burkholderia ambifaria MEX-5]
Length = 373
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 104/245 (42%), Gaps = 40/245 (16%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N LKN W+ VA + D D + EP V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 329
V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD +
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFIWVWPGDA--SEAD 130
Query: 330 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------- 369
P LP + H + + ++ L++DNL+DL H + H
Sbjct: 131 PARLPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPK 190
Query: 370 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIG 416
TS F + P + +GL D P+D F PP V+ +G
Sbjct: 191 TTANGDEVVTSRFMQNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVG 247
Query: 417 ISKPG 421
++ G
Sbjct: 248 VAHAG 252
>gi|167645102|ref|YP_001682765.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167347532|gb|ABZ70267.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 350
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 45/315 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ + +++K + ++P + V+FR ++G C+++ C HR PL +G +
Sbjct: 10 NAWYAAGWDSEIKRE-LLPRTICNKKIVLFRKENGQAVCLEDACWHRLLPLSMGRLKGDD 68
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+QC YHG ++ G+C +MPS + N ++S P E+ +WIWPGD P P L+
Sbjct: 69 VQCGYHGLVFNEHGRCVRMPSQETINPSACVRSFPLVERHRFVWIWPGD--PALADPALV 126
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS- 381
P G IHA+ ++ L++DNL+DL H + H S+ +
Sbjct: 127 PDLHWNHDPAWAGDGKVIHAK------CDYRLIVDNLMDLTHETYIHGSSIGNDAVAEAP 180
Query: 382 ---------------LVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
++ P Q P +D + F PC V +G++ G
Sbjct: 181 FEVTTGDKTAMVTRWMIDIEPPPFWRQQLGKPGNVDRWQIIRFEAPCTVAIDVGVAPTGT 240
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
+ R + ++ P++ K + D+ + V R +V
Sbjct: 241 GAPRGDRSQGVSMVVINTITPATDKTCHYFWANVRDYQLGEQKVTTQI---REAITKVFA 297
Query: 483 EDLRLVLGQQERMNN 497
ED +V QQ +++
Sbjct: 298 EDEVIVEAQQRAIDD 312
>gi|432336210|ref|ZP_19587735.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
wratislaviensis IFP 2016]
gi|430776837|gb|ELB92235.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
wratislaviensis IFP 2016]
Length = 373
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 44/336 (13%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N W+ A+ ++ ++ ++P ++R DG P + + C HR PL LG+ +
Sbjct: 19 NAWYVAAWDYEVTSAKLLARRIADKPMTLYRTTDGRPVALADACWHRLAPLSLGTRIGAD 78
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QCPYHG +++ G+C KMP+ + N + S P ++ +W+WPGD PT P
Sbjct: 79 EVQCPYHGLRFNSAGRCTKMPAQETINPSAMVASYPVEQRHRFLWVWPGD--PTLADPTT 136
Query: 333 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------GWSVP 380
+ P F++ + +++ + L+LDNL+DL H F H+S+ + + V
Sbjct: 137 I-PDMFQMDSPEWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQEELSESDFVVT 195
Query: 381 SLVKFLTPAS--------------------GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
+ +T + G +G D + I +EF+ P + +G++K
Sbjct: 196 HDERTVTVSRWMHNIDAPPFWLKNMRDKFPGFEGKVDRWQI-IEFQAPGTIRIDVGVAKA 254
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + R + ++ P K LY + L+ L R V
Sbjct: 255 GTGAPEGDRSQGVNGFVMNTITPVDEKTA--LYFWAFQRNYRLESQLITTQL-RDGVHGV 311
Query: 481 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVR 514
ED ++ QQ + N +NL + + VR
Sbjct: 312 FGEDEAMLTAQQAAIEANPDHEFYNLNIDAGGMWVR 347
>gi|91789243|ref|YP_550195.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91698468|gb|ABE45297.1| vanillate demethylase subunit A [Polaromonas sp. JS666]
Length = 369
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 36/238 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ ++P ++ V+FR DG +++ C HR PL +G ++
Sbjct: 11 NAWYAAAYDVEVVR-ALLPRTICKQKLVMFRKTDGTVAALEDACWHRLLPLSMGRLDGDE 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG Y+ G+C MPS + N +++ P E+ +W+WPGD P P L+
Sbjct: 70 LTCGYHGLVYNAQGRCTHMPSQETLNPSACVRAYPVLEKHRFVWVWPGD--PAKADPALV 127
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + AE ++++ ++ L++DNL+DL H F H+S+ + G
Sbjct: 128 PDLHWNDDAEWAGDGKMIKVKCDYRLVVDNLMDLTHETFVHSSSIGQRAVAEAPFVATHG 187
Query: 377 WSVPSLVKFL-------------TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
++ +++ + G QG D + + ++F PC V +G+++ G
Sbjct: 188 DRTATVTRWMENIDAPPFWAGQINHSLGYQGPVDRWQV-IKFEAPCTVTIDVGVAEAG 244
>gi|206564276|ref|YP_002235039.1| vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
J2315]
gi|444357697|ref|ZP_21159217.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444370803|ref|ZP_21170432.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198040316|emb|CAR56301.1| vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
J2315]
gi|443596789|gb|ELT65271.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443605882|gb|ELT73697.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
Length = 359
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 104/242 (42%), Gaps = 40/242 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRATDGQVAALEDFCPHRGAPLSLGVVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD P+ P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGD--PSEADPAK 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 369
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 370 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 419
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 420 PG 421
G
Sbjct: 237 AG 238
>gi|419962044|ref|ZP_14478041.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
opacus M213]
gi|414572580|gb|EKT83276.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
opacus M213]
Length = 373
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N W+ A+ ++ ++ ++P ++R DG P + + C HR PL LG+ +
Sbjct: 19 NAWYVAAWDYEVTSAKLLARRIADKPMTLYRTTDGRPVALADACWHRLAPLSLGTRIGAD 78
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPT----AT 328
+QCPYHG +++ G+C KMP+ + N + S P ++ +W+WPGD PT AT
Sbjct: 79 EVQCPYHGLRFNSAGRCTKMPAQETINPSAMVASYPVEQRHRFLWVWPGD--PTLADPAT 136
Query: 329 IPCLLPPSGFEIHAE-IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
IP + E + +++ + L+LDNL+DL H F H+S+ +
Sbjct: 137 IPDMFQMDSPEWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQ 184
>gi|355643018|ref|ZP_09053027.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. 2_1_26]
gi|354830018|gb|EHF14077.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. 2_1_26]
Length = 351
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + PA+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPAT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|148554468|ref|YP_001262050.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499658|gb|ABQ67912.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 359
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 88/168 (52%), Gaps = 15/168 (8%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T L+N W+ A+S++L D T+ +EP V+FRG+DG + + C HR PL LG +
Sbjct: 2 TFLRNAWYAAAWSSELADGTLA-RTFLDEPVVLFRGEDGKAVALADMCPHRFAPLSLGRI 60
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
I+CPYHG + G C P + ++ ++S P E++ ++WIW GD A
Sbjct: 61 GGDTIRCPYHGLVFDKMGACVHNPHGRGVRPSSLSVRSYPVLERDSVLWIWMGD----AA 116
Query: 329 IPCLLPPSGFEI-----HAEI--VMELPIEHGLLLDNLLDLAHAPFTH 369
+ PP F A I ++ + + L+ DNL+DL+HA F H
Sbjct: 117 LAGATPPPSFAFLDKDGWATIRGMLGVGANYELVTDNLMDLSHAEFLH 164
>gi|427730536|ref|YP_007076773.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427366455|gb|AFY49176.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 443
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 145/347 (41%), Gaps = 53/347 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+PV+ DL P VI++ K V + C HR PL G ++E G
Sbjct: 11 WYPVSPIEDLDPQKPTPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSEGRIDEQTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
+ C YHGW++ G C ++P + N + +LP + ++W+W + P
Sbjct: 71 NLMCSYHGWQFDAQGTCTQIPQAENPELVTKNQNNFCVTTLPVRQANDLLWVWLDAQSPE 130
Query: 327 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 376
LP S GF + + V +L + L++N+ D +H PF H K
Sbjct: 131 LAAAQALPLSPQVDANKGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREKA 189
Query: 377 WSVP-SLVKF---LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 432
+P S+V+ L A G + + F PPC + I GK G T
Sbjct: 190 RPIPISIVQSTANLIEAVTTGG----FQTKITFEPPCRLEYAISFGDAGKQVGLIT---- 241
Query: 433 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLV-- 488
C+P + K+R++ + + +FA L F+ W H + VL+ D+ L+
Sbjct: 242 -------YCIPVAPGKSRIVAQFTRNFAKTLHR--FIPRWWDHITNRNAVLDGDMILLQQ 292
Query: 489 ----LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
L Q++ + + LP D+L + +R W D +G QLP+
Sbjct: 293 QEYFLQQKQLTESWKTAYQLPTSADRLVIEFRKWFDVYCRG--QLPW 337
>gi|148556298|ref|YP_001263880.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501488|gb|ABQ69742.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 348
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 7/168 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 272
++N W+ +S DL + EP V +R + G P + + C HR PL G +
Sbjct: 4 VRNCWYVALWSEDLHSGAIENRIILSEPVVFYRDQQGQPVALFDICPHRFAPLSKGRLLP 63
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT-ATI 329
G I C YHG E+ DG C + P ++K P EQ+ +IWIW GD+ P A I
Sbjct: 64 GGGIACGYHGLEFGADGTCIRNPHGDRIPNRAQVKRYPLVEQDSLIWIWMGDQTPDPALI 123
Query: 330 P---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P L P +G+ + + + +P ++ L++DNLLDL+H F H
Sbjct: 124 PRYDFLDPVNGYTVTSRETLTMPCDYRLIVDNLLDLSHINFLHDGILG 171
>gi|352094528|ref|ZP_08955699.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
gi|351680868|gb|EHA64000.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
Length = 440
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 130/312 (41%), Gaps = 52/312 (16%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPG-CVQNTCAHRACPLHLGSVNE-GR 275
W+PVA+ DL F E+ V++ G ++ C HR PL G +N G+
Sbjct: 9 WWPVAYVRDLDPTRPQRFTLLEQDLVLWWDAPGESWRAFKDVCPHRLVPLSEGRINSAGQ 68
Query: 276 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 324
++CPYHGW + G C +P ++ R SLP +G++++W G D
Sbjct: 69 LECPYHGWSFDGQGSCRAIPQLGARARSESRRTACGSLPTAIGQGLLFVWSGTPSAADSA 128
Query: 325 PTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
+P L + IV +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 ALPLVPVLQEQGDGWANGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAS 188
Query: 381 SLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--H 436
+ +T + G + +W P + GKL QNT A L H
Sbjct: 189 PVEAVITREDSQGFEAFWQEGP------------------RKGKLGSQNTHFRAPQLMWH 230
Query: 437 QLHV-----------CLPSSRKKTRLLYRMSLDFASVLKHVPF-MQYLW-RHFAEQVLNE 483
L +P SR K RL R F S L V ++ W +H + E
Sbjct: 231 DLTAKGFARILTVVYAVPISRGKCRLFARFPFQFKSALPRVLVGLRPRWLQHIGNHKVLE 290
Query: 484 DLRLVLGQQERM 495
D ++ L QER+
Sbjct: 291 DDQVFLHWQERV 302
>gi|313109900|ref|ZP_07795830.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
39016]
gi|386063589|ref|YP_005978893.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCGM2.S1]
gi|310882332|gb|EFQ40926.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
39016]
gi|348032148|dbj|BAK87508.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCGM2.S1]
Length = 351
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + PA+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPAT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDRALTESIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|359462641|ref|ZP_09251204.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 458
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 155/342 (45%), Gaps = 46/342 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+PVA DL P + +VI++ KD V Q+ C HR PL G ++E G
Sbjct: 22 WYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSDQYLVFQDLCPHRLAPLSEGRIDEQTG 81
Query: 275 RIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
++ C YHGW++ G C +P Q + + S+P Q G++W+WP +P T
Sbjct: 82 QLMCSYHGWQFDQQGLCTHIPQAEAITPQQSQLYCVTSVPTQSQSGLLWVWP--DPDTQD 139
Query: 329 IPCL--LPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KGW 377
I LP S F + + ++ +L + L++N+ D +H PF H +
Sbjct: 140 IAATQPLPLSPFVNADQNFVWSSVMRDLAYDWQTLVENVSDPSHVPFAHHGVQGNRNQAA 199
Query: 378 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
+P V TP + ++ F+PPC V I GK T
Sbjct: 200 PIPMEVLTSTPELIEVQTTGKFSTNITFQPPCRVEYQFSIGD-GKQATMVT--------- 249
Query: 438 LHVCLPSSRKKTRLLYRMSLDFAS-VLKHVP-FMQYLWRHFAEQVLNEDLRLVLGQQERM 495
C+P + ++R++ + +FA+ ++K +P +++++ VL+ D+ L+ Q++++
Sbjct: 250 --YCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMKNR--NPVLDGDMILLRSQEKQL 305
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
+ ++ LP D+L + YR W + G Q+P+
Sbjct: 306 LQHTQTQSWQTIYKLPTSADRLVIEYRRWFEKYSHG--QIPW 345
>gi|92112477|ref|YP_572405.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795567|gb|ABE57706.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 353
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 142/351 (40%), Gaps = 49/351 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++++ + C E+ V FR + G V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIEEKPLGRTICNEQ-IVFFRAEGGQVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
++ C YHG E DGKC MP ++R I + P E+ G IW+WPGD + IP
Sbjct: 63 QLVCGYHGLEMGCDGKCSSMPGQRVRGFPSIHAYPVVERHGFIWVWPGDAEQADPDQIPE 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L + E + + + ++ L++DNL+DL H + H S+ + ++ P +
Sbjct: 123 LHWANDPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQ-----PEIEEAAPET 177
Query: 391 GLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKP 420
+ G +W D P+D F PP +L +G++
Sbjct: 178 KVNGDEVLTIRHMENIPAPPFWQSALRGNNLADDVPVDRWQICRFTPPSHILIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-- 478
GK + P + + M+ +F P + L E
Sbjct: 238 GKGGYDAPADAKASSIVVDFITPETETSIWYFWGMARNFN------PQDEALTEQIREGQ 291
Query: 479 -QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 528
++ EDL ++ QQ + + L + D GV+ R D + K +
Sbjct: 292 GKIFAEDLEMLESQQRNLLRYPDRRLLMLNIDGGGVQARRVIDRILKAEAE 342
>gi|393719683|ref|ZP_10339610.1| Rieske (2Fe-2S) protein [Sphingomonas echinoides ATCC 14820]
Length = 326
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
K+ W+ ST L+D V P V+FR DG + + C HR L LG+V++G
Sbjct: 15 KDAWYVGVASTQLRD-APVAITLQGAPIVLFRDADGQAQALHDRCPHRGVALSLGTVSDG 73
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 329
I C YHGW + G+C +PS + +++ ++ P EQ+G +W+W G DEP A +
Sbjct: 74 TIACAYHGWRFDGAGRCRHIPSLREDQTIKSAPVRRYPVAEQDGYVWLWTGTDEPEGAPL 133
Query: 330 PCLLPPSGFEIHA--EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
GF+ + MEL E L ++N LD+ HA FTH + + W V FL
Sbjct: 134 AI----DGFDRFQWLQGAMELACEAILPIENNLDICHAAFTHPNMHPQ-WFRVQAVGFL 187
>gi|428304409|ref|YP_007141234.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245944|gb|AFZ11724.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 468
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 150/366 (40%), Gaps = 41/366 (11%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAH 261
++G P K W+PV + DL F + VI+ K G + + C H
Sbjct: 16 LAGGNDPARFDCKEAWYPVFYIEDLDKSKPSKFTLLGQDLVIWWDKQGNSWRALADQCPH 75
Query: 262 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQE 313
R PL G + E G ++CPYHGW ++ +GKC+++P Q N + S P ++
Sbjct: 76 RLAPLSEGRIAEDGLLECPYHGWAFTGEGKCDRIPQQQAENKAHASQRACVASFPTVTRQ 135
Query: 314 GMIWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 366
G+++I+PG EP A +P + P P G+ I +LP + LL+N+LD +H P
Sbjct: 136 GLLFIYPG-EPENAFNVKVPIIEPIEESPDGW-ICLNTFRDLPYDALTLLENVLDASHVP 193
Query: 367 FTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 424
FTH + + L + G +G W+ P R + P +
Sbjct: 194 FTHHRSVGNRTNAAPVELEVVASDKQGFKGIWEEGP-----RKGTLGKQFTTFIAPALMW 248
Query: 425 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVL 481
T + + P + + R+ R F+S L + F++ + H + +
Sbjct: 249 HDLTSKQFGRTLTVVYATPIRKGECRIFARFPFKFSSKLPGL-FLKLTPRWYSHLGQNNV 307
Query: 482 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP---F 531
ED ++ L QER N A + LP D R W + E A P F
Sbjct: 308 LEDDQIFLHYQERYLAAKGGGANFAKAFYLPTRADTFVTALRKWVN--EYQADPFPEETF 365
Query: 532 MKPMQT 537
P+ T
Sbjct: 366 SPPLST 371
>gi|255079488|ref|XP_002503324.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226518590|gb|ACO64582.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 903
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 149/360 (41%), Gaps = 44/360 (12%)
Query: 195 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPG 253
+P K+ + + + N W+PVAF L D + F EP V++R G+
Sbjct: 377 NVPEKTEKNTEKIDDETPEILNQWWPVAFEHQLDADGDKLAVSLFGEPLVLYRTDGGVVN 436
Query: 254 CVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCF 310
CVQ+ CAH++CPL LG V +G++ C YHGW Y G+ +P+ Q + PC
Sbjct: 437 CVQDRCAHKSCPLSLGYVRDGKLLCRYHGWAYGEGGELVDVPALQAGRCPKASVPKYPCH 496
Query: 311 EQEGMIWIWPGDEP-------PTATIPCLLPPSGFE-IHAEIVMELPIEHGL----LLDN 358
+G++ +W G+ P ++ G E + + E G+ ++
Sbjct: 497 VADGVVHVWLGEAAECGRSQLPGHSLVATRSMKGVETLSWPRLTETREWDGVPWHSAVEI 556
Query: 359 LLDLAHAPFTHTSTFAKGWS--VPSLVKFLTPASGLQGYWDPY-------PIDMEFRPPC 409
D H F H +T A V L +F T G+ Y + F PP
Sbjct: 557 TQDFTHLQFVHPNTQAGRAPLLVGGLTEFETEGHPPGGFVAEYVGGSGKGGGRVTFVPPS 616
Query: 410 MVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM 469
V++ +G+ A L + +P++ KT +L V H
Sbjct: 617 TVMNESFFVDEEAPDGKK----AFPLCFVFRFVPTAPGKTAVL---------VQTHQKLF 663
Query: 470 QYLWRHFAEQVLN------EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALE 523
++ FA+ ++N +D ++ Q+ R+ G+ WNLP+ DK + + WR A E
Sbjct: 664 PHISDRFAKALMNMTKVMSQDQLVLAAQRLRVAQGSPQWNLPIESDKHLLHFTKWRVAAE 723
>gi|344174888|emb|CCA87514.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
syzygii R24]
Length = 342
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PGQADPAL 119
Query: 333 LPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ P S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 IHPLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|452957702|gb|EME63065.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
ruber BKS 20-38]
Length = 371
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 52/338 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRI 276
W+ A+ ++ ++ P ++R +DG P + + C HR PL +G+ V I
Sbjct: 21 WYVAAWDHEVGRREILARTIAGTPLALYRTEDGRPVALADACWHRLAPLSMGTLVGADGI 80
Query: 277 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 334
QCPYHG ++++ G+C MP+ Q N + S P E+ +W+WPGD P P +P
Sbjct: 81 QCPYHGLQFNSAGRCTHMPAQQTINPSAMVASYPVVERHRFVWVWPGD--PMLADPSTIP 138
Query: 335 PSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------------ 376
F++ + +++ + L+LDNL+DL H F H+S+ +
Sbjct: 139 DM-FQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQDELSESDFVVTHD 197
Query: 377 --------W-----SVPSLVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
W + P +K + G +G D + I +EF+ P + +G++K G
Sbjct: 198 DRTVTVTRWMHDIDAPPFWLKNMRDKFPGFEGKVDRWQI-IEFQAPSTIRIDVGVAKAGT 256
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL----WRHFAE 478
+ R + ++ P R +L F + +++ L R
Sbjct: 257 GAPEGDRSQGVNGFVMNTISPVDE-------RTALYFWAFMRNYRLDSQLITTQLREGVH 309
Query: 479 QVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVR 514
V ED ++ QQ+ + N G +NL + + VR
Sbjct: 310 GVFGEDEAMLTAQQKAIEANPGHEFYNLNIDAGGMWVR 347
>gi|81300845|ref|YP_401053.1| hypothetical protein Synpcc7942_2036 [Synechococcus elongatus PCC
7942]
gi|81169726|gb|ABB58066.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 334
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ +A STDL T + ++ V++R G + + C HR L G V
Sbjct: 9 LPNHWYAIAASTDLGS-TPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
I CPYHGW++ DG C ++PS Q + K+ S P E+ G+IW++ GD A
Sbjct: 68 NAIACPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQ 127
Query: 329 IPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P P + +V + ++ + +N +D+AH+PF H ++F
Sbjct: 128 TPLWELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVHANSFG 176
>gi|119513069|ref|ZP_01632124.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
gi|119462279|gb|EAW43261.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
Length = 354
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
Query: 214 LKNFWFPVAFSTDL--KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
LKNFW+ FS+ + K +V + +V++R G +++ C+HR L +G +
Sbjct: 2 LKNFWYACEFSSVVTKKPKQIV---MLNQRFVLYRNSQGQVVALKDQCSHRGAALSMGWL 58
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPG----- 321
+ I+CPYHGW++ +DGKC ++PS ++ + I S P E+ G IW++ G
Sbjct: 59 EDNCIRCPYHGWKFESDGKCVQIPSNEVGTPIPKKANITSYPIQEKYGFIWLFYGELPES 118
Query: 322 DEPPTATIPCLLPPSGFEIHAEIV-MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
+ PP +P P+ +H + + + +L+N LDL+H P H +TF G+
Sbjct: 119 ERPPIPALPEFDDPN---LHRSFLDFSVNTHYTRVLENALDLSHLPIVHANTFGAGF 172
>gi|172064135|ref|YP_001811786.1| vanillate monooxygenase [Burkholderia ambifaria MC40-6]
gi|171996652|gb|ACB67570.1| Vanillate monooxygenase [Burkholderia ambifaria MC40-6]
Length = 359
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + EP V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNEPMVFYRAADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKATGMPGQRVGGFPPIRSFPVVERYGFIWVWPGDA--SEADPAR 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 369
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALSWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTTA 179
Query: 370 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 419
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 NGDEVVTSRFMQNVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 420 PG 421
G
Sbjct: 237 AG 238
>gi|334140725|ref|YP_004533927.1| vanillate monooxygenase [Novosphingobium sp. PP1Y]
gi|333938751|emb|CCA92109.1| vanillate monooxygenase [Novosphingobium sp. PP1Y]
Length = 354
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A+ ++ ++ M+ ++ W+I R DG + + C HR PL G +
Sbjct: 14 VRNLWYMAAWDDEIPENGMLSRTLLDDKWLIARLSDGSYAMLADRCPHRFVPLSKGKLEA 73
Query: 274 GRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I CPYHG + G C P+ +V+ +++P + +W WPGD P P
Sbjct: 74 DVIHCPYHGLGFDRTGACVHNPFPAEPPAHVRARTMPVVHRHHGLWFWPGD--PQKADPA 131
Query: 332 LLPPSGFEIHAEIVMELPIEHG---LLLDNLLDLAHAPFTHTSTFAKGWSV 379
L+P GF A + + G LL DNL+DL HA F H ++F S+
Sbjct: 132 LIPDFGFVERAGMSRSRLVIKGHYELLTDNLMDLTHAEFLHVTSFGVNGSI 182
>gi|423095040|ref|ZP_17082836.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886387|gb|EJL02870.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 346
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ ++ +L + ++ E P V FR G+ + + C HR PLH+G V
Sbjct: 4 LLNTWYIAGWADELAQEALLGRTIVERPVVFFRDSQGVIQAIDDRCPHRFAPLHMGKVVG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
IQCPYHG + GKC P T + ++ P E+ G IW+W GD P
Sbjct: 64 DSIQCPYHGLRFDGAGKCTHNPHGEGTIPKAACVRGYPVVERHGAIWVWLGD--PALASD 121
Query: 331 CLLPPSGF----EIHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 376
L+P F HA+ LP + LL DN++DL+H F H T G
Sbjct: 122 ALIPDFSFFEQAPTHAKGKGYLPTRAHYELLSDNIMDLSHVDFLHPDTLGGG 173
>gi|429335882|ref|ZP_19216495.1| vanillate O-demethylase oxygenase subunit [Pseudomonas putida
CSV86]
gi|428759451|gb|EKX81751.1| vanillate O-demethylase oxygenase subunit [Pseudomonas putida
CSV86]
Length = 350
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 133/331 (40%), Gaps = 33/331 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D + + E V +RG +++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIAEKPLGRKICNENMVFYRGDHSRVAALEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
++ C YHG E +DG+ MP +++ I+S P E+ G IW+WPGD TA IP
Sbjct: 63 KLVCGYHGLEMGSDGRTATMPCQRVQAFPAIRSFPVEERHGFIWVWPGDPARADTALIPN 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK------ 384
L S + + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 123 LHWADSPDWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVSGD 182
Query: 385 ---------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEG 425
F A G D P+D F PP V+ +G++ G
Sbjct: 183 EVITSRFMENILPPPFWQAALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAGTGGY 242
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
C + P S + M+ +F + P + R ++ EDL
Sbjct: 243 DAPAHCKAGSIVVDFITPESDTSIWYFWGMARNFKA---DDPALTETIRSGQGKIFAEDL 299
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ QQ + L + D GV+ R
Sbjct: 300 EMLERQQRNLLEHPQRSLLKLNIDAGGVQSR 330
>gi|300868863|ref|ZP_07113469.1| Iron-sulfur cluster-binding protein, Rieske family [Oscillatoria
sp. PCC 6506]
gi|300333080|emb|CBN58661.1| Iron-sulfur cluster-binding protein, Rieske family [Oscillatoria
sp. PCC 6506]
Length = 337
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 85/168 (50%), Gaps = 11/168 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
K FW+PV T+L D VPF+ +P V++ +G P V++ C HR L LG V
Sbjct: 9 FKRFWYPVIPMTELSDRP-VPFELLSQPIVLWLTAEGKPAAVEDKCCHRTAKLSLGKVVN 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
G I C YHGW ++ G+C +P T + K+K+ PC E+ G W+ G+ P I
Sbjct: 68 GNICCAYHGWTFNPCGECVHVPQISEGTISSSYKVKAYPCVERYGYAWVCLGE--PLIDI 125
Query: 330 PCL---LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P + P +IH E +++N LD+AH F HT+TF
Sbjct: 126 PNITEAFDPDYRQIH-EFYETWNCAGLRVMENELDMAHPTFVHTTTFG 172
>gi|56752067|ref|YP_172768.1| hypothetical protein syc2058_d [Synechococcus elongatus PCC 6301]
gi|56687026|dbj|BAD80248.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 340
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ +A STDL T + ++ V++R G + + C HR L G V
Sbjct: 15 LPNHWYAIAASTDLGS-TPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKG 73
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
I CPYHGW++ DG C ++PS Q + K+ S P E+ G+IW++ GD A
Sbjct: 74 NAIACPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQ 133
Query: 329 IPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P P + +V + ++ + +N +D+AH+PF H ++F
Sbjct: 134 TPLWELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVHANSFG 182
>gi|78061272|ref|YP_371180.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969157|gb|ABB10536.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 373
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 9/171 (5%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N LKN W+ VA + D D + E V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VAGTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 329
V +G + C YHG E +GK MP ++ I+S P E+ G IW+WPGD +A
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPAVERYGFIWVWPGDA--SAAD 130
Query: 330 PCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P LP + H + + ++ L++DNL+DL H + H ++ +
Sbjct: 131 PAKLPVLAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQ 181
>gi|259506673|ref|ZP_05749575.1| vanillate demethylase A [Corynebacterium efficiens YS-314]
gi|259165757|gb|EEW50311.1| vanillate demethylase A [Corynebacterium efficiens YS-314]
Length = 379
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 45/345 (13%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ ++ +P ++R +DG + + C HR PL G + GR
Sbjct: 25 NAWYVAAWDHEVTSKGIISRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 83
Query: 276 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 84 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVASFPVVEQYRYIWVWLGD--PTLADPT 141
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK----------- 375
+P H E + + L+LDNL+DL H F H+S+ +
Sbjct: 142 TVPDMHQMTHPEWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHSSSIGQDELSEADFEVT 201
Query: 376 ----GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
+V ++ + P G +G D + I + + P + +G++K
Sbjct: 202 HTEDSVTVSRWMRDIDPPPFWQKNMNDKFPGYEGKVDRWQI-IHYYYPSTICIDVGVAKA 260
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + R + + ++ P + + + + ++ + + R V
Sbjct: 261 GTGAPEGDRSQGVNGYVMNTITPETDRSSHYFWSFQRNYRLDSQ---LITTQLRDGVHGV 317
Query: 481 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALE 523
ED ++ QQE + N +NL + + VR R+ ALE
Sbjct: 318 FGEDEEMLTAQQEAIDANPDYEFYNLNIDAGGMWVR-RILEKALE 361
>gi|87199889|ref|YP_497146.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135570|gb|ABD26312.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 136/340 (40%), Gaps = 41/340 (12%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
+P T L+N W+ +++DL + EEP +FR G + C HR PL
Sbjct: 12 AKPAATYLRNTWYVAGWASDLAGEPQQR-TFLEEPVALFRDGHGEAKAIGGRCPHRFAPL 70
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEP 324
GSV +G + CPYHG + DG+C P L + + + P E+ ++WIW GD
Sbjct: 71 GHGSVVDGALMCPYHGLRFDGDGRCVHNPHPGGHLPDARQRVYPLVERHALLWIWMGDAA 130
Query: 325 PT--ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----TSTFAK 375
A+IP L P + V E E L DN+LDL+HA F H S F +
Sbjct: 131 KADPASIPDFSWLSDPRWEAVRGATVAEGHFE--LYSDNILDLSHANFVHPALVASAFTE 188
Query: 376 G----WS------------VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
G W L ++ G +G + +++ P ++ +
Sbjct: 189 GERKFWQDGDNVFAEYVRLNDELSVGISAVMGTEGRPQDFYGMVKWHAPAVLYFDFRAGE 248
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PG R+ T L LH P + T + + D+ L F + R E
Sbjct: 249 PG-----TPREQCTLLPSLHAFTPETPDTTHYFWATARDYR--LGDAEFTAGM-RAALEF 300
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLP---VGYDKLGVRYR 516
++ ++ R+ G + W L +G D GVR R
Sbjct: 301 AFEQEDMPIIRDSHRLMRGEDFWALRPLILGGDGGGVRAR 340
>gi|25027190|ref|NP_737244.1| vanillate O-demethylase oxygenase [Corynebacterium efficiens
YS-314]
gi|23492471|dbj|BAC17444.1| putative vanillate O-demethylase oxygenase subunit A
[Corynebacterium efficiens YS-314]
Length = 433
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 142/345 (41%), Gaps = 45/345 (13%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ ++ +P ++R +DG + + C HR PL G + GR
Sbjct: 79 NAWYVAAWDHEVTSKGIISRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 137
Query: 276 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 138 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVASFPVVEQYRYIWVWLGD--PTLADPT 195
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK----------- 375
+P H E + + L+LDNL+DL H F H+S+ +
Sbjct: 196 TVPDMHQMTHPEWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHSSSIGQDELSEADFEVT 255
Query: 376 ----GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
+V ++ + P G +G D + I + + P + +G++K
Sbjct: 256 HTEDSVTVSRWMRDIDPPPFWQKNMNDKFPGYEGKVDRWQI-IHYYYPSTICIDVGVAKA 314
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + R + + ++ P + + + + ++ + + R V
Sbjct: 315 GTGAPEGDRSQGVNGYVMNTITPETDRSSHYFWSFQRNYRLDSQ---LITTQLRDGVHGV 371
Query: 481 LNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALE 523
ED ++ QQE + N +NL + + VR R+ ALE
Sbjct: 372 FGEDEEMLTAQQEAIDANPDYEFYNLNIDAGGMWVR-RILEKALE 415
>gi|378716912|ref|YP_005281801.1| putative vanillate O-demethylase oxygenase subunit A [Gordonia
polyisoprenivorans VH2]
gi|375751615|gb|AFA72435.1| putative vanillate O-demethylase oxygenase subunit A [Gordonia
polyisoprenivorans VH2]
Length = 375
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 52/318 (16%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N W+ A+ ++ ++ +P ++R G P + + C HR PL +G +
Sbjct: 19 NAWYAAAWDHEVGSTQILSRTIAGKPLALYRTDSGRPVALADACWHRLAPLSMGKRIGAE 78
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
IQCPYHG +Y+ G+C +MP+ + N + S P E+ +W+WPGD PT P
Sbjct: 79 EIQCPYHGLQYNAAGRCTRMPAQKTINPSAMVASYPIEERHRYLWVWPGD--PTLADPST 136
Query: 333 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
+P F++ + + +++ + L++DNL+DL H F H+S+ G S +F+
Sbjct: 137 IPDM-FQMDSPEWAGDGLTIDVRANYQLVVDNLMDLTHEEFVHSSSI--GQDELSESEFI 193
Query: 387 T------------------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGISK 419
T P L+ D +P +D +EF+ P + +G++K
Sbjct: 194 TTHDENTVTVTRWMHNIDAPPFWLKNMRDKFPGFTGKVDRWQIIEFQAPGTIRIDVGVAK 253
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL----WRH 475
G + R + ++ P R ++ F + +++ L R
Sbjct: 254 AGTGAPEGDRSQGVNGFVMNTISPVDE-------RTAIYFWAFMRNYRLDSQLITTQLRD 306
Query: 476 FAEQVLNEDLRLVLGQQE 493
V ED ++ QQE
Sbjct: 307 GVHGVFGEDEEMLTAQQE 324
>gi|399021375|ref|ZP_10723485.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398092183|gb|EJL82601.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 350
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKI-VFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
++ C YHG E DGK MP ++R I+S P E+ G IW+WPG++ A I
Sbjct: 63 QLVCGYHGLEMGCDGKVISMPGQRVRGFPCIRSFPVVERYGFIWVWPGEKELADPAQIHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
L E + + + E+ L++DNL+DL H + H
Sbjct: 123 LEWADNPEWAYGGGLYHINCEYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRTEGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
TS F + P + ++GL D P+D F PP V+ +G++ GK
Sbjct: 183 EVITSRFMENIMAPPFWRMALRSNGLA---DDVPVDRWQVCHFTPPSHVMIEVGVAHAGK 239
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
Q + P + + M+ +F S
Sbjct: 240 GGYDADPQYKASSIVVDFITPETETSHWYFWGMARNFKS 278
>gi|296391741|ref|ZP_06881216.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PAb1]
gi|416874050|ref|ZP_11917881.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
152504]
gi|334843898|gb|EGM22480.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
152504]
Length = 351
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGTEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|398996835|ref|ZP_10699679.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398125734|gb|EJM15199.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 357
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A +L +D + P EP V++R DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAGEAELGED-LYPVTLLNEPVVLYRKSDGTPVALEDACPHRKLPLSMGRLKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIP 330
I+C YHG + G C P ++ + K++S P + G+IWIW GD + T
Sbjct: 62 DEIECGYHGLTFDCSGSCVHAPGSRRIPQGAKVRSYPLAVRYGLIWIWMGDLDLADETKI 121
Query: 331 CLLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
C +P G + ++ M +P + + DNLLD AH + H S+F
Sbjct: 122 CHVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPAHVAWVHQSSFGN 169
>gi|220906614|ref|YP_002481925.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219863225|gb|ACL43564.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 358
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKNFW+ V FS +K +V++R G + N CAHR L G V +
Sbjct: 2 LKNFWYAVEFSHAVKHQPK-QVTLMGRQYVLYRNSQGQVIALNNQCAHRGAALAGGWVED 60
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA- 327
++CPYHGW+Y+TDG C +P+ Q + ++ + P E+ G IW++ GD+P
Sbjct: 61 NCLRCPYHGWKYATDGACVDIPANQPGVPIPKRARVDAYPVEEKSGFIWMYMGDQPAAER 120
Query: 328 -TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
++P LLP P +H E + + ++++ LD+ HA F H F
Sbjct: 121 PSVPDLLPELHDPHWRSVHGEYTWD--CHYTRVIESNLDVTHAAFVHPPFFGN 171
>gi|89899097|ref|YP_521568.1| Rieske (2Fe-2S) protein [Rhodoferax ferrireducens T118]
gi|89343834|gb|ABD68037.1| Rieske (2Fe-2S) protein [Rhodoferax ferrireducens T118]
Length = 351
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 43/315 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ A ++ + + C E +RG++ V++ C HR PL LG V+EG
Sbjct: 4 KNTWYVAATPNEIDEKPLGRTICGER-IAFYRGEENKVAAVEDFCPHRGAPLSLGYVSEG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
++ C YHG E GK MP ++R IK+ P E+ G IW+WPGD + A IP
Sbjct: 63 KLVCGYHGLEMGCQGKTIAMPGQRVRGFPAIKAYPVVERYGFIWVWPGDAAQADEAKIPH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
+ E + + + ++ L++DNL+DL H + H
Sbjct: 123 MAWYDNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDETPCKTTVEGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
TS F G P + A+ L D P+D F PP V+ +G++ G
Sbjct: 183 TVVTSRFMSGIQPPPFWQMALRANHLA---DDVPVDRWQICRFTPPSHVMIEVGVAHQGH 239
Query: 423 --LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
+ N ++ + + + P + + M+ F K + R ++
Sbjct: 240 GGYDAPNDKKAYSVV--VDFITPETETSIHYFWGMARKFNPADKA---LTASIREGQGKI 294
Query: 481 LNEDLRLVLGQQERM 495
EDL ++ QQ+ +
Sbjct: 295 FGEDLEMLERQQQNL 309
>gi|116053053|ref|YP_793372.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218893999|ref|YP_002442868.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
LESB58]
gi|254238378|ref|ZP_04931701.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
C3719]
gi|392986580|ref|YP_006485167.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
DK2]
gi|416856399|ref|ZP_11912016.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
138244]
gi|420142098|ref|ZP_14649727.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CIG1]
gi|421156423|ref|ZP_15615870.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|421163497|ref|ZP_15622207.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|421170716|ref|ZP_15628644.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|421177160|ref|ZP_15634816.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CI27]
gi|451986046|ref|ZP_21934240.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas aeruginosa 18A]
gi|115588274|gb|ABJ14289.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170309|gb|EAZ55820.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
C3719]
gi|218774227|emb|CAW30044.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
LESB58]
gi|334841960|gb|EGM20577.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
138244]
gi|392322085|gb|AFM67465.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
DK2]
gi|403245161|gb|EJY58988.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CIG1]
gi|404519067|gb|EKA29852.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 14886]
gi|404522544|gb|EKA33037.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 700888]
gi|404528514|gb|EKA38597.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
ATCC 25324]
gi|404529804|gb|EKA39824.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
CI27]
gi|451756295|emb|CCQ86763.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas aeruginosa 18A]
gi|453046414|gb|EME94130.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA21_ST175]
Length = 351
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|15600097|ref|NP_253591.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO1]
gi|418583022|ref|ZP_13147093.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P1]
gi|418592188|ref|ZP_13156064.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P2]
gi|421519468|ref|ZP_15966139.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO579]
gi|9951180|gb|AAG08289.1|AE004903_7 vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PAO1]
gi|375047629|gb|EHS40172.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P1]
gi|375049014|gb|EHS41525.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa MPAO1/P2]
gi|404345387|gb|EJZ71739.1| vanillate O-demethylase oxygenase [Pseudomonas aeruginosa PAO579]
Length = 351
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADDALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|421182982|ref|ZP_15640450.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
E2]
gi|404541080|gb|EKA50455.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
E2]
Length = 351
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGRI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|347528222|ref|YP_004834969.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136903|dbj|BAK66512.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 373
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ AFS ++ + + ++ +I+R G P +Q+ C HR PL LG
Sbjct: 5 LENVWYAAAFSDEVGEKPLA-RKLLDQDLMIYRDSAGRPILLQDRCPHRFAPLSLGKTVG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
I+CPYHG + G C P + LR +++ P E+ G++W WPGD P
Sbjct: 64 DEIECPYHGLRFDRTGACSHNPHMKGGGPLRAAAVRAYPVMEKYGILWFWPGD--PGFAD 121
Query: 330 PCLLPPSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+LP F + ++ + + L++DNLLDL+HA F H KG
Sbjct: 122 EAILPKVKFLEETDRYRLVKGLLHVEGNYQLVIDNLLDLSHAQFIHPGFAIKG 174
>gi|170289317|ref|YP_001739555.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176820|gb|ACB09872.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 331
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 19/176 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
+KN W+ V S +LK ++ F E +RG +G C+ + C HR + G V
Sbjct: 2 IKNQWYVVLSSRELKKGQLIGVTRFGEKLAFWRGSNGKVHCISDICCHRGASISHGKVLS 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
N R+ CP+HG+EY + G+ +P+ N ++KS P +E IWIW GD P
Sbjct: 62 NGERVICPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPE 121
Query: 327 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP F+ ++ E + + ++N LD H PF H +T +G
Sbjct: 122 K------PPKYFDDITDELVYTEFKEVWNVHYSRAIENQLDPIHLPFVHYNTIGRG 171
>gi|49086646|gb|AAT51369.1| PA4904, partial [synthetic construct]
Length = 352
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADDALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|386061075|ref|YP_005977597.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
M18]
gi|347307381|gb|AEO77495.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
M18]
Length = 351
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 131/334 (39%), Gaps = 39/334 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------------- 374
L S + + + ++ L++DNL+DL H + H S+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPTTRVDGD 182
Query: 375 --------KGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
+ P + +GL D +D F PP VL +G++ G
Sbjct: 183 EVITSRHMQNVMAPPFWRMALRGNGLA---DDVAVDRWQICRFTPPSHVLIEVGVAHAGH 239
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
Q + + P S + M+ +F + H + R ++
Sbjct: 240 GGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIFG 296
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 297 EDLEMLESQQRNLLRHPRRDMLKLNIDAGGVQAR 330
>gi|389577642|ref|ZP_10167670.1| ring-hydroxylating dioxygenase, large terminal subunit [Eubacterium
cellulosolvens 6]
gi|389313127|gb|EIM58060.1| ring-hydroxylating dioxygenase, large terminal subunit [Eubacterium
cellulosolvens 6]
Length = 323
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+ + S LK +V F E VIFR +G GCV + CAHR L G + +
Sbjct: 2 INNQWYAILSSHKLKRGKVVGVRRFGENLVIFRTDNGQIGCVNSLCAHRKASLAKGCIQD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMP-----STQ-LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
++CP+HG EY GKC +P STQ ++K+ P E G+I++W GD+ P
Sbjct: 62 DHVKCPFHGIEYDVSGKCVYVPSEGRASTQDYTRFRMKNYPTKEIGGIIFVWYGDKEPEG 121
Query: 328 --TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+ ++ S + + I +++ +++N LD++H F H +T +G
Sbjct: 122 EPDVFDVITDSSYA-YDHIEDTWNVDYSRVIENQLDVSHLAFVHHNTIGRG 171
>gi|121608344|ref|YP_996151.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552984|gb|ABM57133.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 352
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 151/346 (43%), Gaps = 38/346 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + C ++ V++R ++G + + C HR PL LG++ +
Sbjct: 10 NSWYVAAWDAEVGRKLLARTVC-DQDIVLYRKQNGAAVALADACWHRLLPLSLGTIVDDD 68
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++C YHG + ++G+C MPS + N +++ P E+ +WIWPGD P P L+
Sbjct: 69 VRCGYHGLRFDSEGRCTHMPSQETINPSACVRAFPIVERHRFVWIWPGD--PALADPTLV 126
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + + E+ ++ L++DNL+DL H + H S+ G
Sbjct: 127 PDLRWMNDPAWTGDGRMTEVKADYRLVIDNLMDLTHETYVHGSSIGNEALAKAPFDAVHG 186
Query: 377 WSVPSLVKFLT-----PASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQN 427
+ ++ +++ P G Q P P+D + F+ P ++ +G++ G +
Sbjct: 187 ETTATIRRWVLNEDAPPFWGAQ-LGKPGPVDRWQIIHFKAPSTIVLDVGVAPAGSGAPEG 245
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R+ + +H+ PS+ K Y + H + A +L ED +
Sbjct: 246 HREAGVGMWVIHIPTPSTAKSC---YYFWCHLRNYRVHEQRVTREILQGAGGILLEDEIV 302
Query: 488 VLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
+ QQ + N + +N+ + L R RL +EK ++ P
Sbjct: 303 IEAQQRAIDKNPDRDFYNMNIDAGSLWAR-RLIDAMIEKETRRRPI 347
>gi|398990711|ref|ZP_10693884.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399013456|ref|ZP_10715761.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398113575|gb|EJM03420.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398143161|gb|EJM32041.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 371
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 12/170 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ V S+ L D M P +P+V FR G+ + + C HR L +GS
Sbjct: 2 LTNLWYVVLPSSQLNDGLM-PVQLLGQPFVAFRDYAGVAHVLSDICVHRGGSLSVGSKVG 60
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST-QLR---NVKIKSLPCFEQEGMIWIWPGD-----EP 324
+QCPYHGW + DG C ++P+ LR ++ + P E+ G IW + GD P
Sbjct: 61 NSVQCPYHGWRFGADGVCTQIPAQPDLRIPAKARVDAYPTLERYGWIWAFLGDLPESERP 120
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P T+ + P+ + + + +++N LD AHAPF H STF
Sbjct: 121 PLPTLDWIDDPAIRVVSGYFDWQASWDR--IIENGLDFAHAPFVHGSTFG 168
>gi|290956056|ref|YP_003487238.1| oxidoreductase subunit alpha [Streptomyces scabiei 87.22]
gi|260645582|emb|CBG68673.1| oxidoreductase alpha subunit [Streptomyces scabiei 87.22]
Length = 351
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 154/348 (44%), Gaps = 43/348 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A++ ++ + ++ EP V +R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYAEEVGRE-LLGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDG 64
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA---T 328
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P A T
Sbjct: 65 DRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD-PALADPQT 123
Query: 329 IP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------T 370
IP L P + ME + ++GLL+DNLLDL+H + H T
Sbjct: 124 IPRARHLAAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPIT 180
Query: 371 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
+ +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 181 TEVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYFAPCLYLLHSRIAPVG 239
Query: 422 KL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
L E + H + PSS K + +S D+A+ V ++L + V
Sbjct: 240 VLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESDEV--TEFLRGNNHTVV 297
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAK 527
+ + + L L Q+ + L + D G+ R+ +E+G K
Sbjct: 298 MQDVVALNLLQETLGSERTGYQELSINIDTGGLAARRILARLVEQGEK 345
>gi|218439150|ref|YP_002377479.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218171878|gb|ACK70611.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 474
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 23/296 (7%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE-GR 275
W+P+ + DL PF + VI+ K+ + + C HR L G +NE G
Sbjct: 40 WYPIHYVKDLDKTKPTPFTLLDRKLVIWWDKNASVWRVFDDKCPHRLALLSEGRINEQGL 99
Query: 276 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPT 326
I+CPYHGW +S GKCE +P + + + + SLP +G+++ +PG+ P
Sbjct: 100 IECPYHGWTFSGSGKCEFIPQQREGTNAEESKRACVTSLPTTVCQGLLFTYPGNPENAPK 159
Query: 327 ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSL 382
+P L SG + + +LP + LL+N+LD +H PFTH T + + P
Sbjct: 160 VKVPIIESLEDNSGEWVCIDTFRDLPYDALTLLENVLDASHVPFTHHGTVGNRNNAAPVE 219
Query: 383 VKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 441
++ + G G W+ P T+ I+ ++Q L ++
Sbjct: 220 LELVKSGRQGFTGIWEEGPRKGTLGKQ----DTLFIAPNFMTHDLTSKQFGRTLTVVYAT 275
Query: 442 LPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM 495
P S+ K RL R F+S L + + H + + ED ++ L QER
Sbjct: 276 -PISKGKCRLFARFPFQFSSKLPKFFINLTPRWYSHTNQNTILEDDQIFLHYQERF 330
>gi|171058019|ref|YP_001790368.1| Rieske (2Fe-2S) domain-containing protein [Leptothrix cholodnii
SP-6]
gi|170775464|gb|ACB33603.1| Rieske (2Fe-2S) domain protein [Leptothrix cholodnii SP-6]
Length = 351
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 130/336 (38%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ + D + C EP V +R G +++ C HR PL LG V EG
Sbjct: 4 RNAWYVACTPDEFADKPLGRTIC-GEPLVFYRDGSGAVAALEDFCPHRGAPLSLGRVCEG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
R+ C YHG E DGK MP ++R I+S P E+ G +W+WPGD LL
Sbjct: 63 RLVCGYHGLEMGCDGKTIAMPGQRVRGFPAIRSFPVIERHGFVWVWPGDA--ARADAALL 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 369
P + H E + + ++ L++DNL+DL H + H
Sbjct: 121 PALPWADHPEWAYGGGLYNIGCDYRLMIDNLMDLTHETYVHATSIGQKEIDEVPCSTRVD 180
Query: 370 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
TS F G P K +GL D P+D F PP VL +G++
Sbjct: 181 GDEVITSRFMNGIEAPPFWKMALRMNGLP---DDQPVDRWQICHFTPPSHVLIEVGVALA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + + P + + M+ F H P + R ++
Sbjct: 238 GHGGHAAPAEVKASSIVVDFITPETDGSIWYFWGMARHFK---PHDPSLTTQIRDGQGRI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
ED ++ QQ + + L + D GV+ R
Sbjct: 295 FAEDREMLERQQANLTRWPDRKLLALNIDSGGVQAR 330
>gi|158336046|ref|YP_001517220.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158306287|gb|ABW27904.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 458
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 155/343 (45%), Gaps = 48/343 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE--G 274
W+PVA DL P + +VI++ KD G Q+ C HR PL G +++ G
Sbjct: 22 WYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSGQYLVFQDLCPHRLAPLSEGRIDDQTG 81
Query: 275 RIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT-- 326
++ C YHGW++ G C +P S Q + + +P G++W+WP +P T
Sbjct: 82 QLMCSYHGWQFDQQGLCTHIPQAEAVTSQQSQLYCVTVIPTQAHSGLLWVWP--DPDTQD 139
Query: 327 --ATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 376
AT P L P F +++ + +L + L++NL D +H PF H +
Sbjct: 140 VAATQPLPLSPLVDADQNF-VYSSFMRDLAYDWQTLVENLSDPSHVPFAHHGVQGNRNQA 198
Query: 377 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
+P V TP + ++ F+PPC ++E Q +
Sbjct: 199 APIPMEVLTSTPELIEVQTTGKFSTNITFQPPC------------RMEYQFSIGDGKQAT 246
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVP-FMQYLWRHFAEQVLNEDLRLVLGQQER 494
+ C+P + ++R++ + +FA+ ++K +P +++++ VL+ D+ L+ Q+++
Sbjct: 247 MVTYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMLNR--NPVLDGDMILLRSQEKQ 304
Query: 495 M------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
+ N + LP D+L + YR W + G Q+P+
Sbjct: 305 LLQHTQTQNWQTTYKLPTSADRLVIEYRRWFEKYSHG--QIPW 345
>gi|387903877|ref|YP_006334215.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Burkholderia sp. KJ006]
gi|387578769|gb|AFJ87484.1| Putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia sp. KJ006]
Length = 372
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 105/252 (41%), Gaps = 40/252 (15%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
+ P + N LKN W+ VA + D D + E V +R DG +++ C HR
Sbjct: 6 TAPKETTNVFLKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGRVAALEDFCPHRG 64
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD 322
PL LG V +G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD
Sbjct: 65 APLSLGFVRDGVLVCGYHGLEMGCNGKTAAMPGQRVGGFPAIRSFPVVERYGFVWVWPGD 124
Query: 323 EPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH-------- 369
+ P LP + H + + ++ L++DNL+DL H + H
Sbjct: 125 A--SRADPAALPALTWADDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKE 182
Query: 370 ----------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPC 409
TS F P + +GL D P+D F PP
Sbjct: 183 IDEAPPKTTSHGDEVVTSRFMHNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPS 239
Query: 410 MVLSTIGISKPG 421
V+ +G++ G
Sbjct: 240 HVMIEVGVAHAG 251
>gi|121605619|ref|YP_982948.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594588|gb|ABM38027.1| Rieske (2Fe-2S) domain protein [Polaromonas naphthalenivorans CJ2]
Length = 354
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ D+ D + C E V +R ++G +++ C HR PL LG V+EG
Sbjct: 4 KNTWYVACTPQDIDDKPLGRKICGERI-VFYRAQEGRVAALEDFCPHRGAPLSLGFVSEG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E DGK MP ++R +I+S P E+ G IW+WPGD P +
Sbjct: 63 KLVCGYHGLEMGCDGKTIAMPGQRVRGFPQIRSYPVEERYGFIWVWPGDA--AQADPAKI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 369
P + + E + + ++ L++DNL+DL H + H
Sbjct: 121 PHQDWYENPEWAYGGGMFHIHCDYRLMIDNLMDLTHETYVHSGSIGQKEIDEVPCKTTVN 180
Query: 370 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
TS F + P K + L D P+D F PP V+ +G++
Sbjct: 181 GDEVVTSRFMENIMPPPFWKLALRGNNLA---DDVPVDRWQICRFTPPSHVMIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + + P + + M+ F K + R ++
Sbjct: 238 GMGGYDAPPDHKAYSIVVDFITPETETSIWYFWGMARKFNPRDKA---LTATIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ+ + + L + D GV+ R
Sbjct: 295 FSEDLEMLQRQQQNLLDYPERALLKLNIDAGGVQSR 330
>gi|152985552|ref|YP_001350949.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA7]
gi|150960710|gb|ABR82735.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
PA7]
Length = 351
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG++G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELVGKPLGRRIC-DEPMVFYRGEEGRVVALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPGD IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRSMPGQRVRGFPCIRHFPVVERHGFVWVWPGDAGHADATLIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P++
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPST 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D P+D F PP VL +G++
Sbjct: 178 RVEGDEVITSRHMENVMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + Q + P S + M+ +F + H + R ++
Sbjct: 238 GHGGYRAPAQRKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTASIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 295 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|107104003|ref|ZP_01367921.1| hypothetical protein PaerPA_01005076 [Pseudomonas aeruginosa PACS2]
Length = 351
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 131/334 (39%), Gaps = 39/334 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG E A IP
Sbjct: 63 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------------- 374
L S + + + ++ L++DNL+DL H + H S+
Sbjct: 123 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPTTRVDGD 182
Query: 375 --------KGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
+ P + +GL D +D F PP VL +G++ G
Sbjct: 183 EVITSRHMQNVMAPPFWRMALRGNGLA---DDVAVDRWQICRFTPPSHVLIEVGVAHAGH 239
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
Q + + P S + M+ +F + H + R ++
Sbjct: 240 GGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKIFG 296
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 297 EDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 330
>gi|421520559|ref|ZP_15967223.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
gi|402755621|gb|EJX16091.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida LS46]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 43/315 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENLMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P S + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKI 294
Query: 481 LNEDLRLVLGQQERM 495
+EDL ++ QQ+ +
Sbjct: 295 FSEDLEMLERQQQNL 309
>gi|424944304|ref|ZP_18360067.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCMG1179]
gi|346060750|dbj|GAA20633.1| vanillate O-demethylase oxygenase subunit [Pseudomonas aeruginosa
NCMG1179]
Length = 402
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 135/336 (40%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C +EP V +RG+DG +++ C HR PL LG V +G
Sbjct: 55 KNAWYVACTPDELAGKPLGRRIC-DEPMVFYRGEDGRVAALEDFCPHRGAPLSLGFVEDG 113
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPG--DEPPTATIPC 331
+ C YHG DG+ MP ++R I+ P E+ G +W+WPG ++ A IP
Sbjct: 114 VLVCGYHGLAMGEDGRTRAMPGQRVRGFPCIRRFPVQERHGFVWVWPGAEEQADAALIPR 173
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 174 LEWAESPDWAYGGGLYHIHCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAPTT 228
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D +D F PP VL +G++
Sbjct: 229 RVEGDEVITSRHMQNVMAPPFWRMALRGNGLADDVAVDRWQICRFTPPSHVLIEVGVAHA 288
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + + P S + M+ +F + H + R ++
Sbjct: 289 GHGGYQAPAERKAASIVVDFITPESATSIWYFWGMARNFQA---HDQALTESIREGQGKI 345
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ + L + D GV+ R
Sbjct: 346 FGEDLEMLESQQRNLLRHPRRDLLKLNIDAGGVQAR 381
>gi|433457370|ref|ZP_20415370.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Arthrobacter crystallopoietes BAB-32]
gi|432194953|gb|ELK51530.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Arthrobacter crystallopoietes BAB-32]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ST++ + C E+P V+FR +D + + CAHRA PL G
Sbjct: 7 NTWYVAAWSTEVTRKPIRRVIC-EQPIVLFRTQDNEAIALADRCAHRAFPLSEGRTIGDS 65
Query: 276 IQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++C YHG+ Y DG C K+P ST +++ P EQ+G IW+W GD P P +
Sbjct: 66 VECGYHGFTYGPDGMCTKVPAQSTIPERARVRKYPVVEQDGWIWVWTGD--PELANPADV 123
Query: 334 PPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGW 377
P + + + E H L+ DNLLDL H F H +T +
Sbjct: 124 PDTHWMVDPEWATVTHSYHFKCRADLIHDNLLDLTHESFLHKTTVGDDY 172
>gi|395775049|ref|ZP_10455564.1| oxidoreductase subunit alpha [Streptomyces acidiscabies 84-104]
Length = 354
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 42/282 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ +A+S ++ + ++ EP V++R + DG P + + C HR PL ++
Sbjct: 9 RNQWYVMAYSHEVGRE-LLGRTVLGEPIVVYRTEADGTPVALHDRCVHRRYPLSASGLDG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
RI C YHG+ Y T G C +P + R ++ + P EQ+ +IW+W GD P P
Sbjct: 68 DRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVAAYPVVEQDSLIWVWIGD--PALADPA 125
Query: 332 LLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH-------------- 369
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 AIPRARHLDAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPI 182
Query: 370 TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 183 TTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPV 241
Query: 421 GKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
G E + H + PS K + +S D+A+
Sbjct: 242 GVAPEADGSDPHGFHTEITYAITPSGDGKVYDFWMVSRDWAT 283
>gi|288961898|ref|YP_003452208.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288914178|dbj|BAI75664.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 357
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 153/359 (42%), Gaps = 63/359 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A+ ++ D + + P V+FR G + + C HR PL LG+V
Sbjct: 4 LMNSWYVAAWDHEVTADRPLARTLLDRPVVLFRDAAGTARALFDRCPHRFAPLSLGTVQG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTAT 328
++C YHG E+ G C + P T + K+++ P E+ +IWIW GD + A
Sbjct: 64 DSLRCAYHGLEFDGRGACTRNPHGNGTIPKAAKVEAFPLVERHSLIWIWMGDPAKADPAA 123
Query: 329 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 376
IP CL P S + + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFGCLDPES--QHVGKRYLRVNANYMLENDNIMDLSHIQFLHASTLGSDAVAQAVTEV 181
Query: 377 -------WSVPS-----LVKFLTPASGLQ-GYWDPYPIDMEFRPPCMVLSTIGISKPG-- 421
WS+ + + FL A G++ G ID+ + P ++ G G
Sbjct: 182 KEEGNTVWSLRTTHGEIMPDFLYQAMGIEPGIPVDRWIDVRWNAPANMVLLAGAVPSGRP 241
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ EG++T C H+ P + T Y S+ F + PF L AE+ +
Sbjct: 242 RAEGRDTPTC-------HLFTPETATTTH--YWFSISFPKAMG--PFGAQL----AEEQI 286
Query: 482 N--------EDLRLVLGQQERMNNGANVWNLP----VGYDKLGVRYRLWRDALEKGAKQ 528
+ EDL ++ QQ+ M + A W+L VG D GVR R D L +Q
Sbjct: 287 DGLSVPFRTEDLPMLEAQQKAMGD-AEFWSLKPVLLVG-DAAGVRARRVLDRLIAAEQQ 343
>gi|397694476|ref|YP_006532357.1| rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
DOT-T1E]
gi|397331206|gb|AFO47565.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
DOT-T1E]
Length = 355
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P S + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FSEDLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|428222533|ref|YP_007106703.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427995873|gb|AFY74568.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 345
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 97/190 (51%), Gaps = 14/190 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+ FW+PV +L D F E+ V++ + G P ++ C HR+ L LG+V
Sbjct: 9 LRKFWYPVIPIANLSDGPK-SFTLLEQKIVLWLDELGKPAAAKDQCCHRSAQLSLGTVEN 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATI 329
G I CPYHGW++ G C +P +Q +V +I + C E+ G +W+ + P A +
Sbjct: 68 GAIVCPYHGWQFDRAGNCVHIPQSQNISVPSASRINAYKCTERYGYVWVCLDE--PIAEV 125
Query: 330 PCLLPPSGFEIHAEIVMEL--PIE-HGL-LLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 384
P + FE + ++ E P + GL +++N D AH F HT TF +K P L++
Sbjct: 126 PTIT--EAFEPNFRLIREFYEPWKCAGLRVMENEFDFAHPTFVHTGTFGSKDHPTPELLE 183
Query: 385 FLTPASGLQG 394
+ GL+G
Sbjct: 184 IVETPEGLKG 193
>gi|410684123|ref|YP_006060130.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CMR15]
gi|299068612|emb|CBJ39846.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CMR15]
Length = 342
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGTVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PEQADPAL 119
Query: 333 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 375
+ S + + + + L++DNL+DL H + H ++ +
Sbjct: 120 IHHLEWAESEAWAYGGGLYHIQCGYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTKV 179
Query: 376 -GWSVPS--LVKFLTP----ASGLQ--GYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
G +V + ++ + P A+ L+ G D P D F PP VL +G++ GK
Sbjct: 180 EGDAVVTSRFMENIMPPPFWATALRGAGLADDVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|359400756|ref|ZP_09193733.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
gi|357597795|gb|EHJ59536.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
Length = 332
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 221 VAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPY 280
A+S++L + M+P + EP V++R DG C+++ C HR PL LG + ++C Y
Sbjct: 2 AAWSSELVGEAMMPREVLGEPIVLYRAADGSIVCMEDRCCHRLAPLSLGERDGDAVRCLY 61
Query: 281 HGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS-- 336
HG++++ DG C ++P + R+ +++ P E+ G IW+W GD P A + L+PP+
Sbjct: 62 HGFKFARDGACVEIPGQKTIPRSACVQTYPATEKGGWIWVWMGD-PARANLD-LVPPAIG 119
Query: 337 -GFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
G E + + ++ ++ L+ DNL D +H + H ++F
Sbjct: 120 PGDEGWLTDQSHLDYDADYQLINDNLTDFSHLSYVHRNSFG 160
>gi|148556168|ref|YP_001263750.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148501358|gb|ABQ69612.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 108/271 (39%), Gaps = 39/271 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK W+ A S++++ + + +I+R DG P + + C HR PLHLG
Sbjct: 8 LKRAWYVAAMSSEVEGEALFHRRILGTSVMIYRLADGTPVAMHDRCPHRFAPLHLGQREG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I C YH + DG+C P R +++ P E+ G +WIW D P P
Sbjct: 68 DEIACRYHALRFDADGRCTHNPHGNGRIPDAARVRRFPLLERYGFLWIWMDDSDPD---P 124
Query: 331 CLLPPSG--FEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 383
LLP E H A+ M + + + L++DN++DL+H H +G P +
Sbjct: 125 ALLPDFSPLEEGHPNAVAQTYMHMDVNYELIIDNVMDLSHIDHVHGEIITTRGQLSPVVP 184
Query: 384 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPGK 422
K + + W+ P P D+ + P + ++G +
Sbjct: 185 KVRERDTHISARWEWSQTPAMMIFAPFLPRPEDAARHYFDISWTAPANIQLSVGAVQDSD 244
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
G T Q + LH C P KT +
Sbjct: 245 DFGDATSQ-----YDLHTCTPEDAFKTHYFF 270
>gi|148547249|ref|YP_001267351.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida F1]
gi|395448724|ref|YP_006388977.1| Rieske domain-containing protein [Pseudomonas putida ND6]
gi|148511307|gb|ABQ78167.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida F1]
gi|388562721|gb|AFK71862.1| Rieske domain-containing protein [Pseudomonas putida ND6]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 43/315 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P S + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKI 294
Query: 481 LNEDLRLVLGQQERM 495
+EDL ++ QQ+ +
Sbjct: 295 FSEDLEMLERQQQNL 309
>gi|398805739|ref|ZP_10564702.1| ring-hydroxylating dioxygenase, large terminal subunit [Polaromonas
sp. CF318]
gi|398090554|gb|EJL81023.1| ring-hydroxylating dioxygenase, large terminal subunit [Polaromonas
sp. CF318]
Length = 364
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 36/238 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + C ++ V+FR DG +++ C HR PL +GS++
Sbjct: 11 NAWYAAAYDVEVGRKLLARTIC-KQKLVMFRRTDGQVAALEDACWHRLLPLSMGSLDGDE 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG Y+ G+C MPS + N +++ P E+ +WIWPGD P P L+
Sbjct: 70 VTCGYHGLVYNAQGRCTHMPSQETLNPSACVRAFPVLEKHRFVWIWPGD--PAKADPALV 127
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + + ++ + ++ L++DNL+DL H F H S+ + G
Sbjct: 128 PDMHWNDDPDWAGDGKLITVKCDYRLVVDNLMDLTHETFVHGSSIGQRAVAEAPFVATHG 187
Query: 377 WSVPSLVKFLTP-------------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
++ +++ A G +G D + I ++F PC V +G+++ G
Sbjct: 188 DRTATVTRWMENIDAPPFWAGQIEHARGYKGKVDRWQI-IKFEAPCTVNIDVGVAEAG 244
>gi|113477750|ref|YP_723811.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168798|gb|ABG53338.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 465
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 146/350 (41%), Gaps = 35/350 (10%)
Query: 198 RKSLNV---SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPG 253
+KS N+ +G P + W+P+ + DL+ + F E+ VI+ K+
Sbjct: 7 KKSDNIPVSAGGTDPEYFDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWR 66
Query: 254 CVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIK 305
++ C HR PL G +NE G ++CPYHGW +S G CE +P + + K+K
Sbjct: 67 VFEDQCPHRLAPLSQGRINEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVK 126
Query: 306 SLPCFEQEGMIWIWPGD-----EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
SLP +G+++++ G + P + L S I ++P + L++N+L
Sbjct: 127 SLPTKVCQGLLFVYAGKIENAAQTPIPKVDVLDENSNEWICLNTFRDVPYDGLTLMENVL 186
Query: 361 DLAHAPFTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
D +H P+TH T +V P ++ L G +G W+ P R +
Sbjct: 187 DASHIPYTHHRTVGNRANVAPVELEVLESGKWGFKGVWEEGP-----RKGTLGRQETTFI 241
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY---LWRH 475
PG + T + + P + + RL R F+S L F+Q + H
Sbjct: 242 APGMMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPKF-FIQLSPRWYSH 300
Query: 476 FAEQVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
+ + ED ++ L QER N + + LP D R W
Sbjct: 301 IGQNGVLEDDQIFLHYQERYLEAKGGSANFSKAFYLPTKADLFVFELRSW 350
>gi|87198731|ref|YP_495988.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87134412|gb|ABD25154.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 341
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ +S ++ + + ++PWVI+R DG P + + C HR PL G +
Sbjct: 5 LRNAWYMACWSHEVPEGGFLARRLLDKPWVIWRKADGTPVIMADRCPHRFVPLSRGQRDG 64
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG +S+ G C P T L +++ LP E+ +W WPGD P
Sbjct: 65 DMMRCGYHGLAFSSSGGCVHNPFTDEALPLARVEVLPVVEKHTGLWFWPGDA--DRADPA 122
Query: 332 LLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFA 374
L+P GF + +E P+ G L+ DNL+DL+HA F H +F
Sbjct: 123 LIPDFGF-----LDVERPLHRGHLKMDAGYELVTDNLMDLSHAEFIHRDSFG 169
>gi|429197812|ref|ZP_19189686.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
gi|428666507|gb|EKX65656.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
Length = 354
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 42/282 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A++ ++ + ++ EP V +R ++ G P + + C HR PL ++
Sbjct: 9 RNQWYVAAYAHEVGRE-LLGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P P
Sbjct: 68 DRIVCGYHGFTYDTTGTCVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD--PALADPQ 125
Query: 332 LLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH-------------- 369
+P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 TIPRAKHLDSPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPI 182
Query: 370 TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 183 TTEVDEGAGIVRVSRHMDDAECPPFYAKSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPV 241
Query: 421 GKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
G L E + H + PSS K + +S D+A+
Sbjct: 242 GVLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWAT 283
>gi|456386742|gb|EMF52278.1| oxidoreductase subunit alpha [Streptomyces bottropensis ATCC 25435]
Length = 351
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 40/286 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A++ ++ + ++ EP V +R ++ G P + + C HR PL ++
Sbjct: 6 RNQWYVAAYAEEVGRE-LLGRTVLGEPLVFYRTEEEGTPVALHDRCVHRRYPLSESGLDG 64
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTA---T 328
RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P A T
Sbjct: 65 DRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGD-PALADPQT 123
Query: 329 IP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------T 370
IP L P + ME + ++GLL+DNLLDL+H + H T
Sbjct: 124 IPRARHLAAPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAETPIT 180
Query: 371 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
+ +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 181 TEVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYFAPCLYLLHSRIAPVG 239
Query: 422 KL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 466
L E + H + PSS K + +S D+A+ + V
Sbjct: 240 VLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESEEV 285
>gi|386011602|ref|YP_005929879.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
gi|313498308|gb|ADR59674.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
BIRD-1]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 43/315 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P S + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKI 294
Query: 481 LNEDLRLVLGQQERM 495
+EDL ++ QQ+ +
Sbjct: 295 FSEDLEMLERQQQNL 309
>gi|323135827|ref|ZP_08070910.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
gi|322398918|gb|EFY01437.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
Length = 328
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 123/299 (41%), Gaps = 50/299 (16%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
+ N W V + DLK +P E V FR G + + C HR L LG V
Sbjct: 3 SSFANVWTIVGLARDLKPGRPLPMRVAGERIVFFRDASGNAAALLDRCPHRGVALSLGRV 62
Query: 272 NEGRIQCPYHGWEYSTDG-KCEK--MPSTQLRNVKIKSLPCFEQEGMIWIW----PGDEP 324
+ G I+CP+HGW + G C P + N+ SLP E G++W++ P DEP
Sbjct: 63 DRGVIECPFHGWRFDGSGANCGAPFNPDAKRENLGAISLPARESGGLLWLYTGFSPEDEP 122
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
+ G + A+ V+ +++N+LD+ H PF H T G + LV+
Sbjct: 123 ALSDT---FAAPGLALCAQSVL-WRAHWTRVMENMLDMPHLPFVHRRTIGAG--LRELVE 176
Query: 385 FLTPASGLQGYWD---------------PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
+ YW+ P P +E+R P ++ + I PGKL
Sbjct: 177 -----KRMDVYWEDRPYGARVTNAVDSVPRPGALEYRFPNVM--ELFIDPPGKL------ 223
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
+ C+P + TRL+ DFA P + ++R ++ NED +V
Sbjct: 224 -----FRLMVACVPEDEETTRLILLTMRDFA----RSPLLHPVFRWMNRRIANEDQTIV 273
>gi|167033176|ref|YP_001668407.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida GB-1]
gi|166859664|gb|ABY98071.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida GB-1]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 134/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG + V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRRICGEKI-VFYRGHENRVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G +W+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFVWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + ++ E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVNDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P + + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAEAQHKASSIVVDFITPETDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FSEDLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|254574850|pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase
gi|254574851|pdb|3GKE|B Chain B, Crystal Structure Of Dicamba Monooxygenase
gi|254574852|pdb|3GKE|C Chain C, Crystal Structure Of Dicamba Monooxygenase
gi|254839314|pdb|3GB4|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839315|pdb|3GB4|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839316|pdb|3GB4|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839346|pdb|3GOB|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839347|pdb|3GOB|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839348|pdb|3GOB|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839356|pdb|3GTE|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839357|pdb|3GTE|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839358|pdb|3GTE|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839359|pdb|3GTS|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839360|pdb|3GTS|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839361|pdb|3GTS|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|255311844|pdb|3GL0|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311845|pdb|3GL0|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311846|pdb|3GL0|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311847|pdb|3GL2|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311848|pdb|3GL2|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311849|pdb|3GL2|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
Length = 349
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 48/316 (15%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T ++N W+ A +L + + + P ++R DG+ + + C HR PL G +
Sbjct: 3 TFVRNAWYVAALPEELSEKPL-GRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGIL 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
G +QCPYHG E+ G+C P + ++ ++S P E++ +IWIWPGD P
Sbjct: 62 VNGHLQCPYHGLEFDGGGQCVHNPHGNGARPASLNVRSFPVVERDALIWIWPGD--PALA 119
Query: 329 IPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH-----TSTFAK--- 375
P +P G + + + LL+DNL+DL HA + H T F +
Sbjct: 120 DPGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRANAQTDAFDRLER 179
Query: 376 -----------------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
G + KFL A+ W+ D+ + +L+ I ++
Sbjct: 180 EVIVGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWN----DIRWNKVSAMLNFIAVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G ++ + H H+ P + + S +F P M + R +
Sbjct: 236 PEG-----TPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGI---DDPEMDGVLRSWQA 287
Query: 479 QVLNEDLRLVLGQQER 494
Q L ++ ++V+ ER
Sbjct: 288 QALVKEDKVVVEAIER 303
>gi|421865085|ref|ZP_16296769.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia cenocepacia H111]
gi|358074971|emb|CCE47647.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Burkholderia cenocepacia H111]
Length = 359
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 103/242 (42%), Gaps = 40/242 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRATDGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 369
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 370 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 419
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 420 PG 421
G
Sbjct: 237 AG 238
>gi|402567996|ref|YP_006617340.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
gi|402249193|gb|AFQ49646.1| Vanillate monooxygenase [Burkholderia cepacia GG4]
Length = 373
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 36/243 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N LKN W+ VA + D D + E V +R DG +++ C HR PL LG
Sbjct: 14 NVFLKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGQVAALEDFCPHRGAPLSLGF 72
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTA 327
V +G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD E A
Sbjct: 73 VRDGVLVCGYHGLEMGCNGKAAGMPGQRVGGFPPIRSFPVVERYGFVWVWPGDASEADPA 132
Query: 328 TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH----------------- 369
+P L H + + ++ L++DNL+DL H + H
Sbjct: 133 RLPALQWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTT 192
Query: 370 -------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGIS 418
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 193 GNGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVA 249
Query: 419 KPG 421
G
Sbjct: 250 HAG 252
>gi|300693204|ref|YP_003749177.1| vanillate o-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
gi|299075241|emb|CBJ34531.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum PSI07]
Length = 342
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P L
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PGQADPAL 119
Query: 333 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 IHHLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|55584974|gb|AAV53699.1| DdmC [Stenotrophomonas maltophilia]
Length = 339
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 48/316 (15%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T ++N W+ A +L + + + P ++R DG+ + + C HR PL G +
Sbjct: 2 TFVRNAWYVAALPEELSEKPL-GRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGIL 60
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
G +QCPYHG E+ G+C P + ++ ++S P E++ +IWIWPGD P
Sbjct: 61 VNGHLQCPYHGLEFDGGGQCVHNPHGNGARPASLNVRSFPVVERDALIWIWPGD--PALA 118
Query: 329 IPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH-----TSTFAK--- 375
P +P G + + + LL+DNL+DL HA + H T F +
Sbjct: 119 DPGAIPDFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVHRANAQTDAFDRLER 178
Query: 376 -----------------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
G + KFL A+ W+ D+ + +L+ I ++
Sbjct: 179 EVIVGDGEIQALMKIPGGTPSVLMAKFLRGANTPVDAWN----DIRWNKVSAMLNFIAVA 234
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G ++ + H H+ P + + S +F P M + R +
Sbjct: 235 PEG-----TPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGI---DDPEMDGVLRSWQA 286
Query: 479 QVLNEDLRLVLGQQER 494
Q L ++ ++V+ ER
Sbjct: 287 QALVKEDKVVVEAIER 302
>gi|442318048|ref|YP_007358069.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441485690|gb|AGC42385.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 363
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N WF + S +L D + P V+FRG+ G PG + + C HR PL LG V +
Sbjct: 22 LPNAWFILCTSRELGDKPL-SRTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVMQ 80
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 327
G++QC YHGW + T G+C +P + R+ + S EQ+G IW++ PG EP A
Sbjct: 81 GQLQCGYHGWRFDTGGQCRAIPGFLGEPEARSRCVTSYATREQDGFIWVYSTPGVEP--A 138
Query: 328 TIPCLLPPSGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
T P P + + ++ P L+N LD+ H + H F
Sbjct: 139 TEPYRFPLLDAREYTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLF 186
>gi|26990443|ref|NP_745868.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida
KT2440]
gi|24985413|gb|AAN69332.1|AE016570_9 vanillate demethylase A [Pseudomonas putida KT2440]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 133/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +R ++ V++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDEIATKPLGRQICGEKI-VFYRARENQVAAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAVSDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVT 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK Q + P S + M+ +FA+ H + R ++
Sbjct: 238 GKGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQTLTDNIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FSEDLEMLERQQQNLLAHPERNLLKLNIDAGGVQSR 330
>gi|422302482|ref|ZP_16389845.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
gi|389788306|emb|CCI16148.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
Length = 460
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 136/329 (41%), Gaps = 30/329 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++SLP ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLTSEKFGRTLTA 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D L YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLLVFEYRNW 344
>gi|88809638|ref|ZP_01125145.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
gi|88786388|gb|EAR17548.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
Length = 440
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 131/317 (41%), Gaps = 52/317 (16%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVNE-GR 275
W+PVA+ DL F E V++ G + + C HR PL G +N G
Sbjct: 9 WWPVAYLRDLDPGKPQRFTLLERDLVLWWDGVNSTWRAFNDVCPHRLVPLSEGRINSAGD 68
Query: 276 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
++CPYHGW ++ +G C ++P + R SLP +G++++W GD +
Sbjct: 69 LECPYHGWSFNGEGHCTRIPQMGDAGRARGRRSNCASLPTRSAQGLLFVWSGDPEKAESN 128
Query: 330 PCLLPPSGFE---------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
L PS E I + +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 DLPLVPSLQEEGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKTVGKRENAA 188
Query: 381 SLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--H 436
++ + SG + WD P + G+L Q T A L H
Sbjct: 189 PVLAVIQSEDDSGFEAVWDEGP------------------RRGRLGSQFTHFKAPQLMWH 230
Query: 437 QLHV-----------CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNE 483
L +P R + RL R F S L K V ++ W +H + E
Sbjct: 231 DLDAKGFARILTVVYAVPIRRGQCRLFARFPFQFKSALPKVVVGLRPRWLQHIGNHKVLE 290
Query: 484 DLRLVLGQQERMNNGAN 500
D ++ L QER+ A
Sbjct: 291 DDQVFLHWQERVLESAG 307
>gi|161519763|ref|YP_001583190.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189354058|ref|YP_001949685.1| vanillate o-demethylase oxygenase subunit [Burkholderia multivorans
ATCC 17616]
gi|160343813|gb|ABX16898.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338080|dbj|BAG47149.1| putative vanillate o-demethylase oxygenase subunit [Burkholderia
multivorans ATCC 17616]
Length = 347
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ + + C E V FR +G +++ C HR PL LG+V +
Sbjct: 3 LKNAWYVACTPDEFASKPLGRQICGER-MVFFRDGEGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATI- 329
G + C YHG DGKC MP ++R + I+ P E+ G +W+WPGD + +ATI
Sbjct: 62 GHLVCGYHGLTMGADGKCTSMPCQRVRGIPAIRRYPAVERYGFVWVWPGDPAQADSATIH 121
Query: 330 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P + + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 PLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|302039438|ref|YP_003799760.1| rieske iron-sulphur protein [Candidatus Nitrospira defluvii]
gi|300607502|emb|CBK43835.1| Rieske iron-sulphur protein [Candidatus Nitrospira defluvii]
Length = 362
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L FW+P + ST L M +P ++ R K G +++ C HR PL G +
Sbjct: 17 LFGFWYPASTSTALAVGQMQTQVMLGQPILVCRNKQGQVAAMRDICPHRGMPLSFGQFDG 76
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDEPPT 326
R++C YHGW++ T G+C +P+ Q + I S PC +Q+G IW++ P + P
Sbjct: 77 ERVECAYHGWQFDTCGRCRHIPALVEGSPLQPEKIGITSYPCQDQDGYIWVFLPDPQQPK 136
Query: 327 ATIPCL----LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
+P L LP + I +++ I+ G++ L+D AH PF H S++
Sbjct: 137 LPVPELPRLPLPSKPYRMIQISTILDCTIDDGIV--GLMDPAHGPFVHQSSW 186
>gi|116070900|ref|ZP_01468169.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
gi|116066305|gb|EAU72062.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
Length = 438
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 24/297 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIF---RGKDGIPGCVQNTCAHRACPLHLGSVN-E 273
W+P+A+ DL F E VI+ + + + C HR PL G +N E
Sbjct: 9 WWPIAYLQDLDRSQPNRFTLLERDLVIWWDAKAEQASWRVFPDVCPHRLVPLSEGRINDE 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPG-----D 322
G ++CPYHGW + +G C +P + R + SLP +G++++W G +
Sbjct: 69 GLLECPYHGWSFDGEGHCRSIPQAPDNTKPEARRSRCSSLPTAIGQGLLFVWTGEPDAAN 128
Query: 323 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
+ P +P L + +LP++ LL+N+LD++H PFTH T + +
Sbjct: 129 QHPLPLVPALEEDPKSWTLQDTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGNRNNASPV 188
Query: 383 VKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHV 440
+ +T G +W+ P R + T P + T + + +
Sbjct: 189 LATITREAEDGFDAFWEEGP-----RRGKLGSQTTSFHAPQLMWHDLTAKGFARILTVVY 243
Query: 441 CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNEDLRLVLGQQERM 495
+P R + RL R F S + K + ++ W +H + ED ++ L QER+
Sbjct: 244 AVPIRRGECRLFARFPFQFQSAVPKLLIGLRPRWLQHIGNHKVLEDDQVFLHWQERV 300
>gi|407279364|ref|ZP_11107834.1| putative vanillate O-demethylase oxygenase subunit A [Rhodococcus
sp. P14]
Length = 371
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 140/343 (40%), Gaps = 52/343 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRI 276
W+ A+ ++ ++ +P ++R +DG P + + C HR PL +G+ V I
Sbjct: 21 WYVAAWDHEVGRREILARTIAGKPLALYRTEDGRPVALADACWHRLAPLSMGTLVGADGI 80
Query: 277 QCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLP 334
+CPYHG ++++ G+C MP+ Q N + S P E+ +W+WPGD P P +P
Sbjct: 81 RCPYHGLQFNSAGRCTHMPAQQTINPSAMVASYPVVERHRFVWVWPGD--PMLADPDTIP 138
Query: 335 PSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------------ 376
F++ + +++ + L+LDNL+DL H F H+S+ +
Sbjct: 139 DM-FQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSSSIGQDELSESDFTVTHD 197
Query: 377 ------------------WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
W KF G G D + I +EF+ P + +G++
Sbjct: 198 DRTVTVTRWMLDIDAPPFWQKNMRDKF----PGFSGKVDRWQI-IEFQAPSTIRIDVGVA 252
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
K G + R + ++ P K + ++ + + R
Sbjct: 253 KAGTGAPEGDRSQGVNGFVMNTISPVDEKTALYFWAFMRNYCLDSQLITTQT---RDGVH 309
Query: 479 QVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWR 519
V ED ++ QQ+ + N G +NL + + VR + R
Sbjct: 310 GVFGEDEAMLTAQQKAIEANPGHEFYNLNIDAGGMWVRRIIQR 352
>gi|398838093|ref|ZP_10595376.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398905470|ref|ZP_10652864.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
gi|398117134|gb|EJM06888.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM102]
gi|398174440|gb|EJM62235.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM50]
Length = 348
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 136/338 (40%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVTAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+P P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQP--LADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ + G +W D P+D F PP VL +G++
Sbjct: 176 VTTVDGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK +Q + P + + M+ +F + R
Sbjct: 236 HAGKGGYHAPQQFKASSIVVDFITPQTETSIWYFWGMARNFNP---QDEALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLISHPQRNLLKLNIDAGGVQSR 330
>gi|386844703|ref|YP_006249761.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374105004|gb|AEY93888.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451797996|gb|AGF68045.1| alpha-subunit oxygenase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 354
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 43/343 (12%)
Query: 209 PYNTRL-KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPL 266
P+ T +N W+ A+S ++ + ++ EP V +R +D G + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGRE-LLGRTILGEPLVFYRAEDDGTAVALADRCVHRRFPL 60
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 323
++ RI C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD
Sbjct: 61 SESRLDGDRIVCGYHGFTYDTTGACVYVPGQKRVPRTARVASYPVVEQDSLVWVWIGDPA 120
Query: 324 -PPTATI---PCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------- 369
TI P L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 121 LADAGTIPRAPHLDSPDWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEV 177
Query: 370 -----TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTI 415
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 178 AETPITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHS 236
Query: 416 GISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 474
I+ G L E H + PS+ K + +S DFA + V R
Sbjct: 237 RIAPVGVLPEPDGGDPNGFHTEITYAITPSTDGKVFDFWAVSRDFAKDDEEV---TTFLR 293
Query: 475 HFAEQVLNEDL-RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
F V+ +D+ L L Q+ A L + D G+ R
Sbjct: 294 DFNHTVVMQDVDALNLLQRTLGTERAGYQELSINIDTGGLAAR 336
>gi|383786720|ref|YP_005471289.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
gi|383109567|gb|AFG35170.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
Length = 327
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 19/176 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
+KN W+ V S++LK ++ F E ++R + G C+ + C HR L G +
Sbjct: 2 IKNQWYVVLSSSELKKGQLIGLTRFGEKLAMWRDEKGDVHCISDICCHRGASLSHGKLLA 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
N R+ CP+HG+EY GK + +PS N K+KS +E IWIW GD P
Sbjct: 62 NGERLMCPFHGFEYDPTGKVQAIPSNGRTAPVPENFKVKSYKTYELADFIWIWYGDNDPP 121
Query: 327 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+ PPS F+ ++++ + + ++N LD H PF H +T +G
Sbjct: 122 S------PPSYFDDIDDSLVYSQFSEIWNVHYSRAIENQLDPIHVPFVHYNTIGRG 171
>gi|158319648|ref|YP_001512155.1| Rieske (2Fe-2S) domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158139847|gb|ABW18159.1| Rieske (2Fe-2S) domain protein [Alkaliphilus oremlandii OhILAs]
Length = 324
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+ + S +K D +V IFR G GCV + C HR L LG V +
Sbjct: 2 ISNQWYAILPSKKVKTDKIVGVKRMNLDLAIFRNSKGEIGCVVDQCTHRGAALSLGKVKD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
IQCP+HG E++ GKC +P+ + +K P E+ G+I++W GDE
Sbjct: 62 DCIQCPFHGLEFNKIGKCMFIPANGKASTGDISRYNVKHYPVREENGIIYLWYGDE---E 118
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKG 376
I LP EI V +H ++N LD+ H PF H ST +G
Sbjct: 119 KITDDLPFFDKEIDDSFVFSELEDHWNSHYSRCIENQLDVVHLPFVHQSTIGRG 172
>gi|124007563|ref|ZP_01692268.1| rieske 2Fe-2S domain protein, putative [Microscilla marina ATCC
23134]
gi|123987046|gb|EAY26802.1| rieske 2Fe-2S domain protein, putative [Microscilla marina ATCC
23134]
Length = 344
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 9/175 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L + W VAF+ DLK + P +++R V + CAH+ PL + +
Sbjct: 9 LADHWHAVAFAQDLKKKQSFKTKLYGIPLLLWRDTQAQVFAVADVCAHKRAPLAITCFKQ 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
+ CPYHGW+Y DG+ +PS+ N + +LP + G++W++ G P +
Sbjct: 69 NTLTCPYHGWQYKQDGRVCHIPSSPDIDLSKLNASLHTLPIRQANGLLWVYLGKGTPPSK 128
Query: 329 IPCLL--PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 381
+P L P G++ H ++ + LL++N +D H PF H +G P+
Sbjct: 129 LPLSLADPTKGWQ-HVQLKKQFDTSEELLIENFMDATHTPFIHRGII-RGHGAPT 181
>gi|403527463|ref|YP_006662350.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
gi|403229890|gb|AFR29312.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
Length = 367
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 144/353 (40%), Gaps = 53/353 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N WF + ++ ++ P ++R DG + + C HR PL G V
Sbjct: 20 NAWFVAGWDHEISAKGILARTIAGRPLALYRTGDGRAVALADACWHRLAPLSQGKLVGRD 79
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
IQCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD PT P L
Sbjct: 80 EIQCPYHGLRYNAAGRCTSMPAQETLNPSATVPSFPVVERYRYVWVWLGD--PTKADPGL 137
Query: 333 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 375
LP G IHA P + L+LDNL+DL H F H+S+ +
Sbjct: 138 LPDMHQLDSPEWAGDGETIHA------PCNYQLVLDNLMDLTHEEFVHSSSIGQEELSES 191
Query: 376 ------GWSVPSLVKFL----TPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 416
+ ++ +++ P L+ D +P +D + + P + +G
Sbjct: 192 EFEVTHDETSVTVTRWMRNIDAPPFWLKNMRDKFPDFEGKVDRWQIIHYYFPSTICIDVG 251
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
+++ G + R + + ++ P + + + ++ L+ L R+
Sbjct: 252 VAEAGTGAPEGDRSRGVNGYVMNTITPETERSCHYFWAFMRNYR--LESQLITTQL-RNG 308
Query: 477 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAK 527
V ED ++L QQ + N +NL + + VR RL ALE ++
Sbjct: 309 VHGVFGEDEAMLLAQQAAIDANPDYEFYNLNIDMGGMWVR-RLLERALEAESR 360
>gi|209516871|ref|ZP_03265721.1| Vanillate monooxygenase [Burkholderia sp. H160]
gi|209502687|gb|EEA02693.1| Vanillate monooxygenase [Burkholderia sp. H160]
Length = 376
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C EP V +R DG +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACMPDEVADKPLGRQIC-GEPMVFYRNADGAVVALEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG E GK MP ++ I+S P E+ G +W+WPGD + A +
Sbjct: 63 TLVCGYHGLEMGCQGKATGMPGQRVNGFPSIRSYPVIERYGFVWVWPGDATQADAAKLHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWAESSEWAYGGGLYHIRCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTVAEGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 421
TS F + + P K +GL D P+D F PP VL +G++ G
Sbjct: 183 TVRTSRFMENVAAPPFWKMALRGNGLA---DDVPVDRWQICHFTPPSHVLIEVGVAHAG 238
>gi|427718650|ref|YP_007066644.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427351086|gb|AFY33810.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 464
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 138/328 (42%), Gaps = 34/328 (10%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE-GR 275
W+PV + DL+ PF VI+ K + + C HR PL G +N+ G
Sbjct: 32 WYPVYYLDDLEQSQPTPFTLLGRDIVIWWDKQAKLWRAFDDQCPHRLAPLSEGRINQDGL 91
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGMIWIWPGDEPPTAT 328
++CPYHGW +S G C+++P + + + SLP E++G+++++PG+ P AT
Sbjct: 92 LECPYHGWAFSGSGSCDRIPQQVVNGIAETSQRACVASLPTAERQGLLFVYPGN-PENAT 150
Query: 329 ---IPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT-HTSTFAKGWSVP 380
IP + P P+ + + +LP + LL+N+LD +H PFT H S + + P
Sbjct: 151 KTQIPIVAPLEESPTEW-VCLNTFRDLPYDALTLLENVLDSSHLPFTHHRSVGNRANAAP 209
Query: 381 SLVKFLTP-ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLH 439
++ ++ G G W+ P R + PG + T + +
Sbjct: 210 VELEVISSNKQGFTGIWEEGP-----RRGKLGRQETKFIAPGLMWHDLTSKQFGRTLTVV 264
Query: 440 VCLPSSRKKTRLLYRMSLDFASVLKHV--PFMQYLWRHFAEQVLNEDLRLVLGQQERM-- 495
P + + RL R F + L + + H + + ED ++ L QER
Sbjct: 265 YATPIRKGECRLFARFPFKFPNKLPGLLMKLTPRWYNHIGQNGILEDDQIFLHYQERYLE 324
Query: 496 -----NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D R W
Sbjct: 325 AKGGSTNFTKAFYLPTKADSFVFELRQW 352
>gi|404400064|ref|ZP_10991648.1| oxidoreductase subunit alpha [Pseudomonas fuscovaginae UPB0736]
Length = 353
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG++G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEK-MVFYRGQEGAVMAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P + + + + E+ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 PHLEWAVSDQWAYGGGLFEIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARYMENIMAPPFWRMALRGNHLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ F H + R
Sbjct: 236 HAGKGGYHAAPEHKAASIVVDFITPQTETSIWYFWGMARSFNP---HDQALTESIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|75907526|ref|YP_321822.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701251|gb|ABA20927.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 443
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 143/345 (41%), Gaps = 57/345 (16%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+PV+ DL P VI++ K + + C HR PL G +++ G
Sbjct: 11 WYPVSPIEDLDPKRPTPVTLLGIRLVIWKPKSSDSFRIFIDQCPHRLAPLSEGRIDDKTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVK---IKSLPCFEQEGMIWIWP------ 320
+ C YHGW++ T+G C ++P + +N K + SLP ++ ++W+WP
Sbjct: 71 NLMCSYHGWQFDTEGVCTRIPQAENPEIVTKNQKDFCVNSLPVRQENDLLWVWPDVNSQE 130
Query: 321 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 376
+ P P + GF + V +L + L++N+ D +H PF H +G
Sbjct: 131 LAHQTPLPLSPQVDASKGF-VWTSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNREQG 189
Query: 377 WSVPSLVKFLTP------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 430
+ P + TP A GL + F PPC + I + GK G T
Sbjct: 190 RARPISIMQSTPGLIEAVADGL------VTAKITFEPPCRLEYAISVGNDGKQLGLVT-- 241
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLV 488
CLP S K+R++ + +FA L + W H + VL+ D+ ++
Sbjct: 242 ---------YCLPVSPGKSRIVAQFPRNFAKTLHRL--TPRWWDHIKTRNLVLDGDM-IL 289
Query: 489 LGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGA 526
L QQE + + + +P D+L + +R W D G
Sbjct: 290 LNQQEHLIQQRQLSASWKTAYKMPTSADRLVIEFRKWFDKYCDGG 334
>gi|15644039|ref|NP_229088.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|418044556|ref|ZP_12682652.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
gi|4981841|gb|AAD36358.1|AE001783_9 oxidase-related protein [Thermotoga maritima MSB8]
gi|351677638|gb|EHA60785.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
Length = 331
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
+KN W+ V S +LK ++ F E +R +G C+ + C HR + G V
Sbjct: 2 IKNQWYVVLSSRELKKGQLIGVTRFGEKLAFWRDSNGKVHCISDICCHRGASISHGKVLS 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
N R+ CP+HG+EY + G+ +P+ N ++KS P +E IWIW GD P
Sbjct: 62 NGERVMCPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPE 121
Query: 327 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP F+ ++ E + + ++N LD H PF H +T +G
Sbjct: 122 K------PPKYFDDITDELVYTEFKEVWNVHYSRAIENQLDPIHLPFVHYNTIGRG 171
>gi|398890089|ref|ZP_10643805.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
gi|398188717|gb|EJM76013.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM55]
Length = 357
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A +L +D + P E V++R DG P +++ C HR PL +G
Sbjct: 3 LRNAWYVAASEAELGED-LFPVTLLSESVVLYRKSDGTPVALEDACPHRKLPLSMGRRKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIP 330
I+C YHG + G C + P +Q + +++S P + G+IWIW GD E
Sbjct: 62 DDIECGYHGLTFDCSGSCVRAPGSQRIPQGARVRSYPLAVRYGLIWIWMGDLELADEAKI 121
Query: 331 CLLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
C +P G + ++ M +P + + DNLLD AH + H S+F
Sbjct: 122 CHVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPAHVAWVHQSSFGNA 170
>gi|359767566|ref|ZP_09271352.1| vanillate demethylase oxygenase subunit [Gordonia
polyisoprenivorans NBRC 16320]
gi|359314961|dbj|GAB24185.1| vanillate demethylase oxygenase subunit [Gordonia
polyisoprenivorans NBRC 16320]
Length = 375
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 41/269 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N W+ A+ ++ ++ +P ++R G P + + C HR PL +G +
Sbjct: 19 NAWYAAAWDHEVGSTQILARTIAGKPLALYRTDSGRPVALADACWHRLAPLSMGKRIGAE 78
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
I+CPYHG +Y+ G+C +MP+ + N + S P E+ +W+WPGD PT P
Sbjct: 79 EIRCPYHGLQYNAAGRCTRMPAQETINPSAMVASYPIEERHRYLWVWPGD--PTLADPST 136
Query: 333 LPPSGFEIHA------EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
+P F++ + + +++ + L++DNL+DL H F H+S+ G S +F+
Sbjct: 137 IPDM-FQMDSPEWAGDGLTIDVRANYQLVVDNLMDLTHEEFVHSSSI--GQDELSESEFI 193
Query: 387 T------------------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIGISK 419
T P L+ D +P +D +EF+ P + +G++K
Sbjct: 194 TTHDENTVTVTRWMHNIDAPPFWLKNMRDKFPGFTGKVDRWQIIEFQAPGTIRIDVGVAK 253
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKK 448
G + R + ++ P ++
Sbjct: 254 AGTGAPEGDRSQGVNGFVMNTISPVDERR 282
>gi|17548443|ref|NP_521783.1| vanillate O-demethylase oxygenase [Ralstonia solanacearum GMI1000]
gi|17430690|emb|CAD17373.1| probable vanillate o-demethylase oxygenase subunit oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 342
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 34/240 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGD--PEQADPAR 119
Query: 333 L-----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 375
+ S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 120 IHHLEWAESEAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTKV 179
Query: 376 -GWSVPS--LVKFLTP----ASGLQ--GYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
G +V + ++ + P A+ L+ G D P D F PP VL +G++ GK
Sbjct: 180 EGDAVVTSRFMENIMPPPFWATALRGAGLADDVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|254254788|ref|ZP_04948105.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124899433|gb|EAY71276.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 347
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V FR +G +++ C HR PL LG+V +
Sbjct: 3 LKNTWY-VACTPDEFADKPLGRQICGERMVFFRDANGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD----EPPTAT 328
GR+ C YHG DGKC MP ++ + I+ P E+ G +W+WPGD +P T
Sbjct: 62 GRLVCGYHGLTMGADGKCVSMPCQRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIH 121
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
G+ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 RLHWADDPGWA-YGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|107025482|ref|YP_622993.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116693336|ref|YP_838869.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894856|gb|ABF78020.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116651336|gb|ABK11976.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 359
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRAADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|307107837|gb|EFN56079.1| hypothetical protein CHLNCDRAFT_145588 [Chlorella variabilis]
Length = 563
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 137/346 (39%), Gaps = 53/346 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN-EGRI 276
W+P+A+ D+ DD F E+P VI++ G C+++ C HR PL G + G +
Sbjct: 93 WYPIAYVKDIPDDAPYGFVLLEQPIVIWKDGGGAYRCLRDACPHRLVPLSDGRIAPNGEL 152
Query: 277 QCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWI------WPGDEPPTA 327
QCPYHGW++ G C MP + C ++G++W+ G EP T+
Sbjct: 153 QCPYHGWQFKGCGTCTLMPQGGDPTAPRAAATAYQCAVKQGLVWVKLQPAPTDGSEPDTS 212
Query: 328 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 385
+I + L G+ ++ ++P + L++N++D H PFTH A +L
Sbjct: 213 SIHTIPELDKEGWFAFGDMWRDIPYDWATLIENVVDCGHVPFTHHGERA------ALGVL 266
Query: 386 LTPASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
G QG W P F P ++ TI + +TR
Sbjct: 267 ERGQFGFQGVWPTGPRKGALGAQHTRFEGPVLMRHTI--------DAFDTRGFGNITAVY 318
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKHVPF--MQYLWRHFAEQ-VLNED---------LR 486
V P + + R + R F + L + F M H VL+ED
Sbjct: 319 GV--PVAPGRCRAIVRQPFRFKNKLLPLAFKVMPAFLGHLGNNSVLDEDNIFLHMQARAC 376
Query: 487 LVLGQQERMNNG------ANVWNLPVGYDKLGVRYRLWRDALEKGA 526
+ +QE + G V+ +P D +R W ++ G
Sbjct: 377 FLPAEQESVRRGMGEKPAGQVYYMPAASDAYVSAFRNWMKSVAGGG 422
>gi|312199684|ref|YP_004019745.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311231020|gb|ADP83875.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 373
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 83/170 (48%), Gaps = 14/170 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++ W PVA ST+L D+ + EPWV+ R +G+ ++ C HR PL G V+
Sbjct: 14 LRHGWHPVALSTELGDEPLA-VRLLGEPWVLAR-LNGVLTAFEDRCPHRLAPLSAGRVDG 71
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ CPYHGW Y+ DG C +P+ R + E+ G++WI P DEP
Sbjct: 72 ETLVCPYHGWRYAADGGCTLVPALGPGVPAPRRARATTAWGVTERHGLVWIAP-DEPFAE 130
Query: 328 TIPCLLPPSGFEIHAEIVME---LPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ LP +G + +E GLL DN LD AH PF H +T
Sbjct: 131 IL--ALPEAGEDGFDSTWLEPARSTAAAGLLADNFLDTAHFPFVHAATIG 178
>gi|115359078|ref|YP_776216.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284366|gb|ABI89882.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 366
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 138/355 (38%), Gaps = 67/355 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ +++K D + E ++FR G V N C HR PLHLG
Sbjct: 12 LRNAWYVAAWDSEVKADELFQRTLLNESVLLFRNDRGEVQAVSNRCPHRFAPLHLGKKLP 71
Query: 274 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 328
+QCPYHG E+ G+C + P + ++K+ P E+ +IWIW G+ ++
Sbjct: 72 NGVQCPYHGLEFDGSGQCTRNPHGGGVVPKAAQLKTYPVVEKYSLIWIWMGEASIADSSK 131
Query: 329 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 385
IP CL P A+ + + + L DN+LDL+H + H T ++
Sbjct: 132 IPDFSCLDPQ--LSHVAKRYLHVKANYVLETDNILDLSHIQYLHPGTLGSSSVADAITSV 189
Query: 386 L----TPASGLQGYWDPYP------------------IDMEFRPPCMVLSTIGISKPGKL 423
+ T S Q D P ID+ + P +L G GK
Sbjct: 190 VQEGNTVYSMRQTVGDIMPEFLYRQRRIPVGTPVDRWIDVRWDAPAHMLLDAGSVATGKP 249
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS-------------LDFASVLKHVPFMQ 470
+ H+ P + T + +S DF S L H PF
Sbjct: 250 RSEGVSNKIAHIFS-----PETASTTHYWFAVSNPLSMGDDGMQRAEDFVSGLVH-PFQ- 302
Query: 471 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNL-PV--GYDKLGVRYRLWRDAL 522
NEDL ++ QQ M A+ W+L PV D VR R D L
Sbjct: 303 -----------NEDLPMLEAQQH-MIGEADFWSLKPVLLAGDAAAVRARRILDKL 345
>gi|282897695|ref|ZP_06305694.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281197374|gb|EFA72271.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 360
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N L+N W+ S+ LK MV EP ++ R K+G +++ C HRA PL G
Sbjct: 12 NILLRNLWYYALPSSQLKTGKMVSRVLLREPILLTRDKNGQVFAIEDICPHRAVPLSCGR 71
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 323
+ +++C YHGW + + GKC ++P S L +KS P +E +G IWI+ D+
Sbjct: 72 FDGEQVECCYHGWRFDSQGKCTQIPSLLPEQSIDLSKFNVKSYPVYETQGNIWIYMYDKE 131
Query: 324 -----PPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 376
IP + S E VM+ P I+H + L+D AH+P+ H + +
Sbjct: 132 GASINAEIGNIPQIPGFSNIEPDLVEVMKFPCFIDHA--VTGLMDPAHSPYVHQVWWWRS 189
Query: 377 WSVPSLVKFLTPA 389
+ VK P+
Sbjct: 190 GKLHEEVKQFDPS 202
>gi|443312467|ref|ZP_21042084.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442777445|gb|ELR87721.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 338
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+ FW+P +T+L + PF+ E VI+ K G P VQ+ C HR+ L +G V +
Sbjct: 9 LRKFWYPAIPTTELSNSPN-PFELLGEKIVIWLDKAGKPAAVQDRCCHRSAQLSIGKVVD 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
G I C YHGW++++DG C +P T N KIKS C E+ G +W+ E P +
Sbjct: 68 GNICCAYHGWQFNSDGACVCVPQLKDETIPANYKIKSYRCTERYGYVWV--CLEEPLIDL 125
Query: 330 PCLLPPS--GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKFL 386
P + + + + E +++N DLAH F HT+TF ++ +P +K
Sbjct: 126 PEIDEATKPDYRLLHEFYELWKCAALRVMENEFDLAHPTFVHTTTFGSEEHPIPESMKLT 185
Query: 387 TPASGLQ 393
GL
Sbjct: 186 ETEWGLH 192
>gi|374369367|ref|ZP_09627399.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
gi|373099109|gb|EHP40198.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
Length = 345
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 110/279 (39%), Gaps = 38/279 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ + ++ + M P V++R + G +++ C HR PL +G
Sbjct: 3 IKNTWYVAGWDKEIPAEGMFSRTIIGVPVVMYRKEHGGIVALEDRCCHRGAPLSVGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHG ++ + GKC + P+ + K++ P EQ +WIW GD P P
Sbjct: 63 DCIRCMYHGLKFDSAGKCIEAPAQERIAPQAKVRKFPTVEQHRWVWIWMGD--PDKADPS 120
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 376
L+P + + H E + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTQWLDHPEWRSLDGYIHYDVNYLLICDNLLDFSHLPFVHPTTLGGSEDYAAVRPKV 180
Query: 377 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
W++ P+ K + G W+ Y F P ++L G+S G
Sbjct: 181 ERIDGGVRITRWAINTEAPAFAKAVKAYPGKVDRWNIY----NFTIPAILLMDSGMSPTG 236
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
R A P + T + +FA
Sbjct: 237 TGAPAGVRVDAAEFRGCQAITPETENSTHYFFAHPHNFA 275
>gi|148554478|ref|YP_001262060.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499668|gb|ABQ67922.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 85/175 (48%), Gaps = 16/175 (9%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T + N W+ +S DL D V +P V+FR DG+ + + C HR PLHLG V
Sbjct: 2 TFIVNQWYGAIWSQDLGD-APVARRLLGKPIVLFRTDDGV-AALADVCPHRFVPLHLGKV 59
Query: 272 NEGR-IQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+GR I+C YHG E+ G C + P R K++S E+ GM+WIW G+
Sbjct: 60 VDGRAIRCGYHGLEFDRTGACVRNPHNAGRIPPAAKVESHQVAERHGMVWIWMGERDAD- 118
Query: 328 TIPCLLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P L+P F I A +E+ + ++++NLLDL+HA H
Sbjct: 119 --PSLIPDYSFLDSADPQHISARDHLEIRSNYRIVVENLLDLSHASILHDGILGN 171
>gi|443314552|ref|ZP_21044102.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
gi|442785849|gb|ELR95639.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
Length = 474
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 137/340 (40%), Gaps = 59/340 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 275
W+PV + DL F + VI+ V N C HR PL G +NE G+
Sbjct: 43 WYPVHYVEDLDPQRPTRFTLLGQDLVIWWEPQAKAWRVFANQCPHRLAPLSEGRINEAGQ 102
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-------SLPCFEQEGMIWIWPG--DEPPT 326
++CPYHGW +S G CE++P + SLP ++G+++++PG + P
Sbjct: 103 LECPYHGWTFSGSGACEQIPQQSPETAAHRSPRACAHSLPTAVRQGLLFVYPGRVENAPQ 162
Query: 327 ATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW-SVPS 381
+P + P G+ + +LP + LL+N+LD +H P+TH T K + P
Sbjct: 163 VPVPIIEAVEAEPEGW-VMLNTFRDLPYDALTLLENVLDASHIPYTHHKTVGKRENAAPM 221
Query: 382 LVKFLTPA-SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--HQL 438
+ + P G QG W P + GKL Q+TR A L H L
Sbjct: 222 EMTVIDPGKQGFQGLWPEGP------------------RKGKLGTQSTRFVAPGLMYHDL 263
Query: 439 H-----------VCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR---HFAEQVLNED 484
P + + RL R F+S L F+ + R H + ED
Sbjct: 264 TSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSPLPRF-FIGVIPRWLSHIGNNGVLED 322
Query: 485 LRLVLGQQERM------NNGANVWNLPVGYDKLGVRYRLW 518
++ L QER A LP D+ +R W
Sbjct: 323 DQIFLHLQERFLAQAGDQPYAQTCYLPTQADRYVTAFRQW 362
>gi|399076244|ref|ZP_10751897.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037577|gb|EJL30762.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 340
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 64/342 (18%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T L N W+ A+S ++ + T+ + P V++R + + + C HR PL +G +
Sbjct: 2 TYLYNAWYAAAWSHEISE-TLFSRTFLDIPVVLYRNAEAKVIALHDRCPHRFAPLSMGQI 60
Query: 272 NEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TA 327
EGR++C YHG + G C M + + K+++ EQ+ M+WIW GD P TA
Sbjct: 61 VEGRLRCGYHGLSFDEAGACVHSLMSTVAPKAAKVRAFAVHEQDKMVWIWMGDAAPGDTA 120
Query: 328 TIPCLLPPSGFEIHAEIVMELPI-------EHGLLLDNLLDLAHAPFTHTS-------TF 373
IP L H + VM ++ LL DNL+DL H H +
Sbjct: 121 AIPRL------PHHTDEVMSCNFGLTTAKADYRLLSDNLMDLTHTALLHPAFGGLDYIAK 174
Query: 374 AKGWS----------VPSLVKFLTPASGLQGY------WDPYPIDMEFRPPCMVLSTIGI 417
K W V + F P + L+ + W P +L +
Sbjct: 175 TKSWEEDGQVVSDHVVEDMPAFFAPGTDLKVHNRDTIRW--------IAPATHILES--- 223
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
++ + T++ H+ P SRK T + + S + M L + F
Sbjct: 224 ----RITPMDDANWETYIPSAHILTPESRKTTHYFWSSASHKDSGVSDEAMMATLIQAFD 279
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNL-PV--GYDKLGVRYR 516
ED +V Q+RM + A++W+L PV D GVR R
Sbjct: 280 ----FEDKPMVEAVQQRMGD-ADLWDLNPVLLPADAGGVRVR 316
>gi|386288171|ref|ZP_10065332.1| vanillate monooxygenase [gamma proteobacterium BDW918]
gi|385278866|gb|EIF42817.1| vanillate monooxygenase [gamma proteobacterium BDW918]
Length = 351
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 80/170 (47%), Gaps = 12/170 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ +S DL E V+FR +G + C HR PL G V
Sbjct: 4 LRNCWYCAGWSADLGGQP-TGIKILNEEIVLFRDSEGRATALSGICPHRFAPLSKGKVVG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
RIQCPYHG E++ +G+C P + K++S P E+ G +WIW GD P A
Sbjct: 63 DRIQCPYHGLEFNQEGRCMLNPHGRGLIPERAKLQSYPLAERHGALWIWMGD--PGAADE 120
Query: 331 CLLPPSGFEIHAEI------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+P F E + + + L++DNLLDL HA + H ST A
Sbjct: 121 SKIPEFDFVSDRESWAGATGYLRMDASYELVIDNLLDLTHADYIHGSTLA 170
>gi|300696759|ref|YP_003747420.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
gi|299073483|emb|CBJ52999.1| Vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Ralstonia
solanacearum CFBP2957]
Length = 342
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG++G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGQEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 329
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 330 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 376
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWAESKTWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEG 181
Query: 377 WSVPS--LVKFLTP----ASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGK 422
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 182 DTVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|390438979|ref|ZP_10227404.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
gi|389837609|emb|CCI31528.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
Length = 459
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 143/350 (40%), Gaps = 30/350 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++SLP ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPLEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLTSEKFGRTLTA 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTRK 539
N + LP D YR W + + P+Q+++
Sbjct: 316 QARGDSRNFSQACYLPTKADLFVFEYRNWVNQYQADPFAGQPFPPLQSKE 365
>gi|340795645|ref|YP_004761108.1| vanillate monooxygenase [Corynebacterium variabile DSM 44702]
gi|340535555|gb|AEK38035.1| vanillate monooxygenase [Corynebacterium variabile DSM 44702]
Length = 382
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 10/168 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEG 274
N W+ A+ ++ + + +P ++R KDG + + C HR PL G +
Sbjct: 30 NAWYVAAWDHEVTSKSPISRTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLIGRD 89
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
IQCPYHG +Y++ G+C MP+ + N + S P E+ IW+W GD PT P L
Sbjct: 90 GIQCPYHGLQYNSAGRCMSMPAQETLNPSAAVPSYPVVERYRYIWVWLGD--PTLADPTL 147
Query: 333 LPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+P H E + + + L+LDNL+DL H F H+S+ +
Sbjct: 148 VPDMHQMDHPEWTGDGLTIAAACNYQLILDNLMDLTHEEFVHSSSIGQ 195
>gi|282900953|ref|ZP_06308886.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
gi|281194044|gb|EFA69008.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
Length = 354
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 16/193 (8%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N L+N W+ S+ LK MV +EP + R K+G +++ C HRA PL G
Sbjct: 6 NILLRNLWYYALPSSQLKTGKMVSRVLLKEPILFTRDKNGQVFAIEDICPHRAVPLSCGR 65
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 323
+ +++C YHGW +++ GKC ++P S L +KS P +E +G IWI+ D+
Sbjct: 66 FDGEQVECCYHGWRFNSQGKCTEIPSLLPEQSIDLSRFNVKSYPVYETQGNIWIYMYDKE 125
Query: 324 -PP----TATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP IP + S E VM+ P I+H + L+D AH+P+ H + +
Sbjct: 126 GPPINAEIGDIPQVPGFSNREPDLVEVMKFPCFIDHA--VTGLMDPAHSPYVHQVWWWRS 183
Query: 377 WSVPSLVKFLTPA 389
+ VK P+
Sbjct: 184 GKLHEEVKQFDPS 196
>gi|434402833|ref|YP_007145718.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257088|gb|AFZ23038.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 443
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 138/337 (40%), Gaps = 43/337 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+P++ D+ VP VI++ K V + C HR PL G V++ G
Sbjct: 11 WYPLSPIEDIAPQRPVPVTLLGIRLVIWKSKLSENYRVFLDQCPHRLAPLSEGRVDDKTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 325
+ C YHGW++ G C +P + RN + SLP ++ ++W+WP +
Sbjct: 71 NLMCSYHGWQFDEQGICTHIPQAENPELVAKNQRNFCVVSLPVRQENDLLWVWPDADSTE 130
Query: 326 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 378
A P L P GF + + V +L + L++N+ D +H PF H + +
Sbjct: 131 LAANTPLPLSPQIDVKKGF-VWSSYVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRETA 189
Query: 379 VPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
P + + L + + F PPC + I + K G T
Sbjct: 190 TPIALNIIKSTENLIEASTAGRFQTTITFEPPCRLEYAISVPNSDKQLGLVT-------- 241
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRL------V 488
C+P S K R++ + +FA L F+ W H QVL+ D+ L +
Sbjct: 242 ---YCIPVSPGKCRIVAQFPRNFAKTLHR--FIPRWWNHIKTRNQVLDGDMILLHQQEYL 296
Query: 489 LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
L Q++ + + LP D+L + +R W D +G
Sbjct: 297 LQQKQLSESWKTAYKLPTSADRLVIEFRNWFDKYCQG 333
>gi|374989216|ref|YP_004964711.1| oxidoreductase subunit alpha [Streptomyces bingchenggensis BCW-1]
gi|297159868|gb|ADI09580.1| oxidoreductase subunit alpha [Streptomyces bingchenggensis BCW-1]
Length = 354
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 40/280 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A+ ++ + ++ EP +R + DG + + C HR PL ++
Sbjct: 6 RNQWYVAAYGREIGRE-LLGRTILGEPIAFYRSESDGAVVALHDRCVHRRYPLSASRLDG 64
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD---EPPTAT 328
R+ C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD PTA
Sbjct: 65 DRVVCGYHGFTYDTTGTCVFVPGQKRIPRTARVASYPVVEQDSLVWVWIGDPKSAAPTAI 124
Query: 329 --IPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTH--------------T 370
P L P + ME PI+ +GLL+DNL+DL+H + H T
Sbjct: 125 PRAPWLADPRWTTVGG---ME-PIDAGYGLLVDNLMDLSHETYLHGGYIGTPEVAETPIT 180
Query: 371 STFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
+T +G V + + F ++G++G + D+E+ PC+ L I+ G
Sbjct: 181 TTVDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIAPVG 239
Query: 422 KLEGQNTRQ-CATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
L G + A H+ + PS+ + +S DFA
Sbjct: 240 VLPGPDGDDPDAFHVEITYAITPSTEHSVYDFWAVSRDFA 279
>gi|307155301|ref|YP_003890685.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306985529|gb|ADN17410.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 337
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 208 QPYNTRLK------NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 261
QP R++ N+W+PVA++ +LK ++P +++ ++R G ++N C H
Sbjct: 10 QPVQNRVREIGINPNYWYPVAWAYNLKPTQIIPVVVWQQAIAVYRDSKGQLHALENACPH 69
Query: 262 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIW 317
+ L G V E + CPYHGWE++ +G+C K+ P +L K +S P E+ G+IW
Sbjct: 70 KGVVLDKGEVRENILVCPYHGWEFNPEGECIKIPYLPPEQKLPCAKARSYPVQEKYGIIW 129
Query: 318 IWPGDEPPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTF 373
++PGD AT L + I++E+P + +N +D+ H F H +
Sbjct: 130 VFPGDA-SLATQQSLPDLPEYNDPDWIIVEIPAHFKAHFSICNENTMDVFHG-FLHRN-- 185
Query: 374 AKGWSVPSLVKF 385
+GW P L+K
Sbjct: 186 LQGWFDPILLKL 197
>gi|416979262|ref|ZP_11937843.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
gi|325519917|gb|EGC99179.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. TJI49]
Length = 359
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D ++ E V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKLLGRKICGESMVFYRTADGSVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP-------- 324
G + C YHG E DGK MP ++ I+S P E+ G IW+WPGD
Sbjct: 62 GTLVCGYHGLEMGCDGKTTGMPGQRVGGFPAIRSFPAIERYGFIWVWPGDATRADPAKLH 121
Query: 325 --PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P A P H + + ++ L++DNL+DL H + H S+ +
Sbjct: 122 HLPWADDPAW-------AHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|170079201|ref|YP_001735839.1| Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
gi|169886870|gb|ACB00584.1| probable Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
Length = 452
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 27/323 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVNEGRI 276
W+P+ F DL F EP VI+ + K + C HR PL G + +G +
Sbjct: 23 WYPIHFVQDLDKTKPTRFVLLGEPLVIWWQPKTQQWQVFSDVCPHRLAPLSEGRIVDGCL 82
Query: 277 QCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD-----EP 324
+CPYHGW+++ G C K+P + ++K+ ++G+++++ GD +
Sbjct: 83 ECPYHGWQFAETGACTKIPFQAPDGEAHHSPRAQVKTYASCVKQGLLFVYGGDRHEAAQT 142
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P T+P L G + A++ ++P + LL+N+LD +H FTH + +
Sbjct: 143 PIPTVPQLDQHPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPRVGNRKNAKEFIL 202
Query: 385 FLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCL 442
++ +G G W+ P R + P + + +
Sbjct: 203 DVSEVEKTGFTGNWEEGP-----RRGTLGSQKTTFFAPAAMWHDIPESPFGQVMTVVYAT 257
Query: 443 PSSRKKTRLLYRMSLDFASVLKHVP--FMQYLWRHFAEQVLNEDLRLVLGQQER-----M 495
P+ + + R + R+ F + + + F + H + + ED ++ L QER
Sbjct: 258 PTEKGRCRAIVRLPFRFKAAIPRLAFKFTPRWFSHLNQMGILEDDQIFLHLQERELAKST 317
Query: 496 NNGANVWNLPVGYDKLGVRYRLW 518
N A LP D + YR W
Sbjct: 318 QNYAKTCYLPTSSDLFVLAYRQW 340
>gi|425466450|ref|ZP_18845748.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
gi|389831010|emb|CCI26578.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
Length = 460
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 135/329 (41%), Gaps = 30/329 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGLIYHDLTSEKFGRTLTA 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D L YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLLVFEYRNW 344
>gi|260221223|emb|CBA29571.1| Vanillate O-demethylase oxygenase subunit [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 351
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A S ++ D + P +FR G+ V++ C HR PL LG V
Sbjct: 5 NTWYVAARSEEIPSDRPLGRRICNIPMALFRNSAGVSAAVEDFCPHRGAPLSLGKVEGDT 64
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPCL 332
+ C YHG DGK MP + R I+S P E+ G +W+WPGD + A+IP
Sbjct: 65 LVCGYHGLAMGCDGKTVSMPCQRTRGFPAIRSFPIHEEHGFVWVWPGDAAKADVASIPKF 124
Query: 333 L----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P G+ + E+ ++ L++DNL+DL H + H+++ +
Sbjct: 125 EWLGNPQFGY---GGGLYEIACDYRLMIDNLMDLTHETYVHSTSIGQ 168
>gi|81300844|ref|YP_401052.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
gi|81169725|gb|ABB58065.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
Length = 345
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN+W+PVA + + D + C E ++R G + + C HR L G V
Sbjct: 3 LKNYWYPVALAQKVGDRPLSVTLC-GEAIALYRDSAGQIHALSDRCVHRGAALSGGWVEN 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPG-----DE 323
+ CPYHGW+Y G C K+P+ + K+ E+ G++W++ G D
Sbjct: 62 DCLVCPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADR 121
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP +P P+ + E+ + + +NL+D AHAPFTH+ +F
Sbjct: 122 PPLPPLPEYDDPAWRTVQGEVTYT--THYTRVTENLMDFAHAPFTHSGSFG 170
>gi|113953594|ref|YP_731035.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CC9311]
gi|113880945|gb|ABI45903.1| cell death suppressor protein Lls1 homolog [Synechococcus sp.
CC9311]
Length = 440
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 40/306 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE-GR 275
W+PVA+ DL F E+ V++ G ++ C HR PL G +NE G+
Sbjct: 9 WWPVAYLRDLDRTRPQRFTLLEQDLVLWWDAPGQCWRAFEDVCPHRLVPLSEGRINEAGQ 68
Query: 276 IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-----DEP 324
++CPYHGW + G C +P ++ + S P +G++++W G D
Sbjct: 69 LECPYHGWSFDGQGTCRAIPQMGERARSESKRTGCGSFPTATGQGLLFVWSGTASAADSA 128
Query: 325 PTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
+P L IV +LP++ LL+N+LD++H PFTH T K +
Sbjct: 129 ALPLVPVLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGKRENAS 188
Query: 381 SLVKFLT--PASGLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
+ +T + G + +W P D FR P ++ + T +
Sbjct: 189 PVEAVITREDSQGFEAFWQEGPRRGKLGSQDTHFRAPQLMWHDL------------TAKG 236
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDF-ASVLKHVPFMQYLW-RHFAEQVLNEDLRLVL 489
+ + +P SR K RL R F A+ + + ++ W +H + ED ++ L
Sbjct: 237 FARILTVVYAVPISRGKCRLFARFPFQFKAAAPRLLVGLRPRWLQHIGNHKVLEDDQVFL 296
Query: 490 GQQERM 495
QER+
Sbjct: 297 HWQERV 302
>gi|428219240|ref|YP_007103705.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991022|gb|AFY71277.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 360
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
KNFW+ V FS D +T F + + ++R G + N C HR L G+VN+
Sbjct: 2 FKNFWYAVEFS-DRISETPCLVKAFNQEFAVYRTAAGKVLAMDNRCVHRGAALANGTVND 60
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD-----E 323
+ CPYHGW++ + GKC +P+ K+ + E+ G IW++ GD
Sbjct: 61 NCLTCPYHGWKFDSSGKCVDIPANPAGMSIPNRAKVSTYDVVEKYGWIWLFWGDLPIDER 120
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
PP +P P I + E +++N LD+AHAPF H F
Sbjct: 121 PPIPELPHFYNPDLKAISGDFNWSANYER--IVENGLDIAHAPFVHAGAFGN 170
>gi|358455131|ref|ZP_09165359.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357081384|gb|EHI90815.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 367
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+++W+PVAF++DL + V++R +G P C + C HR L G +
Sbjct: 16 LRHYWYPVAFASDLGGAPLA-RRLLGTDVVLWRDAEGRPACAADRCPHRDAKLSRGWTED 74
Query: 274 GRIQCPYHGWEYSTDGKC----EKMPSTQLR-NVKIKSLPCFEQEGMIWIW--PGDEPPT 326
G + CPYHGW Y +DGKC + P ++ + + P E G++W+ P EP T
Sbjct: 75 GAVVCPYHGWRYGSDGKCVLIPQNAPGQRISPRAVVATYPVTEALGLLWVCLDPASEPAT 134
Query: 327 A-----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
A IP P G+ + E P LLDN LD AH F H TF
Sbjct: 135 AMAGIPAIPQFGQP-GWRVVQEFDTVWPCSAPHLLDNNLDPAHIAFVHRRTFGN 187
>gi|119493134|ref|ZP_01624040.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119452788|gb|EAW33964.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 443
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 139/343 (40%), Gaps = 55/343 (16%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+P++ DL P VI++ K V + C HR PL G V+E G
Sbjct: 11 WYPLSPVEDLNPQQPTPVTLLGINLVIWKPKSSQTYQVFLDECPHRLAPLSEGRVDENTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIW--PGDEP 324
+ C YHGWE+ +G C +P S N P E ++W+W P
Sbjct: 71 NLMCSYHGWEFDQNGICTSIPQAEKPEIVSKNKENFCATQFPTQEANDLLWVWADPNSSE 130
Query: 325 PTATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH---TSTFAKG 376
A P L P GF + + V +L + L++N+ D +H PF H KG
Sbjct: 131 QAAKTPLPLSPQIDASQGF-VWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRKKG 189
Query: 377 WSVPSLVKFLTPASGL-----QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
P +K + L QG+++ + F PPC + I GK G T
Sbjct: 190 --SPIHLKIIESNLNLIEAKYQGFFN---TKITFEPPCRLEYAIEFGSDGKQVGLVT--- 241
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVL 489
CLP S K+R++ + + +F+ L + + W H + VL+ D+ + L
Sbjct: 242 --------YCLPVSPGKSRIVAQFTRNFSQRLNKI--IPRWWEHVKTRNLVLDGDM-IFL 290
Query: 490 GQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
QQER+ + + LP D+L + +R W + G
Sbjct: 291 HQQERLLQQKQKTESWKTAYKLPTEADRLVIEFRKWFEQYSGG 333
>gi|347528273|ref|YP_004835020.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136954|dbj|BAK66563.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 363
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 47/278 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A++ ++ + + + VI+R + +++ C HR PL G V E
Sbjct: 5 LRNAWYASAYADEIGERPLAR-KLLDRDMVIYRDAEKQLAVLEDRCPHRFAPLSGGKVIE 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIWIWPGD-----EP 324
G IQCPYHG + G C P + L+ + + P E+ G++WIWPGD E
Sbjct: 64 GTIQCPYHGLRFDRTGACTHNPHMKGGGPLKAASVAAWPVLEKYGIVWIWPGDPERARED 123
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
I L P F + + ++ + + L++DNLLDL+HA + H +S L+
Sbjct: 124 ALPRIDFLERPKDFSV-VKGLLHVRGHYELVVDNLLDLSHAAYIHPQFAGGQYSSEELLA 182
Query: 385 ---------------------FLTPAS--GLQGYWDPYPID----MEFRPPCMVLSTIG- 416
PA+ L G+ P+ M + PP M+ +G
Sbjct: 183 ATKQKLERRERSIVNHRIRSGLAAPAAHQALFGFDAQTPVHSESTMTWHPPAMLDFAVGS 242
Query: 417 -ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
I K EG H+ QLH P + + +
Sbjct: 243 WIDGTPKEEG-------AHIPQLHFITPETEFSSHYFF 273
>gi|297203738|ref|ZP_06921135.1| oxidoreductase alpha subunit [Streptomyces sviceus ATCC 29083]
gi|197711787|gb|EDY55821.1| oxidoreductase alpha subunit [Streptomyces sviceus ATCC 29083]
Length = 357
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 42/290 (14%)
Query: 209 PYNTRL-KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPL 266
P+ T +N W+ A+S ++ + ++ EP V +R + DG P + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGREELLGRTILGEPLVFYRTEEDGTPVALADRCVHRRFPL 61
Query: 267 HL--GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD 322
H ++ RI C YHG+ Y T G C +P + R ++ S P E + ++W+W GD
Sbjct: 62 HEKPSRLDGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVELDSLVWVWIGD 121
Query: 323 EPPTA---TIP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------ 369
P A TIP L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 122 -PALADADTIPRARHLDSPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGT 177
Query: 370 --------TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL 412
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 178 PEVAETPITTEVDEGAGIVRVSRHMDDAACPPFYAKSTGIEGRITRWQ-DIEYHAPCLYL 236
Query: 413 STIGISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
I+ G L E + H + PSS + +S D+A+
Sbjct: 237 LHSRIAPVGVLPETDGSDPNGFHTEITYAITPSSDGHVYDFWMVSRDWAT 286
>gi|312960145|ref|ZP_07774657.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285639|gb|EFQ64208.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 357
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 13/175 (7%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
+ L N W+ ++ +L M+ E+P V FR G+ + + C HR PLH G V
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRDSHGVIQALADRCPHRFAPLHRGKV 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDE--PPT 326
+QCPYHG + G+C P + K ++ E+ G IW+WPGD
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGEGNIPKAACVRGFAAVERHGAIWVWPGDRHLASD 121
Query: 327 ATIPCLLPPSGFE---IHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 376
A IP S FE HA+ LP + LL DN++DL+H F H T G
Sbjct: 122 ALIPDF---SFFEQAPTHAKGHGYLPTRAHYELLSDNIMDLSHVDFLHPDTLGGG 173
>gi|254249888|ref|ZP_04943208.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124876389|gb|EAY66379.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 359
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRTADGQIAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|300313279|ref|YP_003777371.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum seropedicae SmR1]
gi|300076064|gb|ADJ65463.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 349
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 102/239 (42%), Gaps = 36/239 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +RG G V++ C HR PL LG V EG
Sbjct: 4 KNAWY-VACTPDEIDSKPLGRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFVREG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 331
++ C YHG E DGK MP ++R I+S P E+ G IW+WPGD+ A I
Sbjct: 63 QLVCGYHGLEMGCDGKAISMPGQRVRGFPCIRSYPVEERYGFIWVWPGDKEQADPAQIHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEGE 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 421
TS F P + +GL D P+D F PP V+ +G++ G
Sbjct: 183 QVITSRFMDNIMPPPFWRMALRGNGLA---DDVPVDRWQICRFSPPSHVMIEVGVAHAG 238
>gi|397735423|ref|ZP_10502121.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396928725|gb|EJI95936.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 345
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A+S DL ++ E P V++R DG+ + + C HR PL G +N+
Sbjct: 4 LKNAWYMAAWSQDLGVGKLLSRTIIEVPVVLYRSNDGVAHALMDRCPHRFAPLSRGELND 63
Query: 274 GRIQCPYHGWEYSTDGKCEK--MPSTQL-RNVKIKSLPCFEQEGMIWIWPGD-EPPTATI 329
I C YHG E+ DG C + PS ++ + + + P E++ + WIW GD +P I
Sbjct: 64 RGIACGYHGLEFDHDGVCIRNPHPSGKIPKRAHVNAYPVVERDTIAWIWMGDRDPDEDLI 123
Query: 330 P---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P L +G ++M+ + L++DNLLD +H F H
Sbjct: 124 PDYSILTKSNGVTRRDYLLMDASFD--LIVDNLLDCSHTSFLHKGVLG 169
>gi|238024817|ref|YP_002909049.1| Vanillate monooxygenase [Burkholderia glumae BGR1]
gi|237879482|gb|ACR31814.1| Vanillate monooxygenase [Burkholderia glumae BGR1]
Length = 359
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 138/366 (37%), Gaps = 63/366 (17%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D + + E V FRG+ G +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIETGPLGRKICGESIVFFRGERGEVVALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP-------- 324
GR+ C YHG E DGK MP ++ + E+ G IW+WPGD
Sbjct: 62 GRLVCGYHGLEMGCDGKVAGMPGQRVGGFPAARRYAAVERSGFIWVWPGDASHADPARLH 121
Query: 325 --PTATIPCLLPPSG-FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------ 369
P A P G + IH ++ L++DNL+DL H + H
Sbjct: 122 HLPWAEDPAWAYGGGLYHIHC--------DYRLMIDNLMDLTHETYVHASSIGQKEIDEA 173
Query: 370 ------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLS 413
TS F P K +GL D P+D F PP V+
Sbjct: 174 PPKTVSRGDEVITSRFMHNIGAPPFWKMALRGNGLA---DDVPVDRWQICRFTPPSHVMI 230
Query: 414 TIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFM 469
+G++ G + + P + + M+ +F A + +
Sbjct: 231 EVGVAHAGNGGYDAPAELKASSIVVDFITPETETSIWYFWGMARNFRPDDAELTAQI--- 287
Query: 470 QYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 529
R ++ EDL ++ QQ+ + + L + D GV R D L + L
Sbjct: 288 ----REGQGKIFAEDLEMLERQQQNLLAWPDRQLLKLNIDAGGVLSRKVIDRLLAEERAL 343
Query: 530 PFMKPM 535
P +P+
Sbjct: 344 PAGRPV 349
>gi|134292215|ref|YP_001115951.1| vanillate monooxygenase [Burkholderia vietnamiensis G4]
gi|134135372|gb|ABO56486.1| Vanillate monooxygenase [Burkholderia vietnamiensis G4]
Length = 359
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 40/242 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V +R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVFYRAADGRVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG E +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLEMGCNGKTAAMPGQRVGGFPAIRSFPVVERYGFVWVWPGDA--SRADPAA 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 369
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALTWADDPVWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHATSIGQKEIDEAPPKTTS 179
Query: 370 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISK 419
TS F P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMHNVMPPPFWQMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 420 PG 421
G
Sbjct: 237 AG 238
>gi|393770172|ref|ZP_10358677.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
GXF4]
gi|392724326|gb|EIZ81686.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
GXF4]
Length = 362
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 147/369 (39%), Gaps = 42/369 (11%)
Query: 195 KLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGC 254
LPR + + + + L N W+ V S L + + E V+ R DG P
Sbjct: 7 SLPRPAEDAALDPEAMRQPLGNAWYCVGQSRSLGRTGLRAVELNGEQIVLGRAPDGTPFA 66
Query: 255 VQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLP 308
+++ C HR L G + + CP+HGW + TDG+C +P+ ++++ P
Sbjct: 67 LRDRCPHRGMALSKGRFDGDTLMCPFHGWRFGTDGRCRDVPTLSEHDAADFSRIQVQRFP 126
Query: 309 CFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAP 366
E G +W+ P P + +P +P FE +V+EL +E + L +L+D H
Sbjct: 127 VRESAGFLWVNPHLGPASGAVPA-VPELDFEPAGSLVVELVVEASYDLTTLSLVDPGHVA 185
Query: 367 FTHTS-TFAKGWSVPSLVKFLTP--------------ASGLQGYWDPYP-IDMEFRPPCM 410
F H S F + VK P +S + P +++EFR P M
Sbjct: 186 FVHDSWWFRPSKQLREKVKTFQPVPHGFVMTSHATTTSSPVYRLLGGVPEVEIEFRLPGM 245
Query: 411 VLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 470
L I R A + P + +T L + ++ P +
Sbjct: 246 RLERI-------------RAGAKRVANYTFATPLTPDRTLLTNALYWSMPALNLLKPVAR 292
Query: 471 YLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 530
L R F L +D +++ Q+ ++ + G +RL R+ALE P
Sbjct: 293 PLMRQF----LTQDQQVLQHAQDGLDRKPTMVLFGQGDLPSQWYFRLKREALESARAGRP 348
Query: 531 FMKPMQTRK 539
F+ P++ R+
Sbjct: 349 FVNPLEQRE 357
>gi|218440057|ref|YP_002378386.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218172785|gb|ACK71518.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 442
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 44/303 (14%)
Query: 257 NTCAHRACPLHLGSVN--EGRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKS 306
+ C HR PL G ++ G + C YHGWE+ T G C+++P + ++ ++
Sbjct: 51 DQCPHRLAPLSEGRIDPKTGYLMCSYHGWEFDTQGTCQRIPQAEKPEIVQEKVQQWCVRV 110
Query: 307 LPCFEQEGMIWIWPGDEPP--TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNL 359
P ++ ++W+WP + A+ P L P GF + + +V +L + L++N+
Sbjct: 111 FPTRQENDLLWVWPDENSAELAASTPLPLSPLLDAKKGF-VWSSMVRDLDYDWQTLVENV 169
Query: 360 LDLAHAPFTHTSTFA---KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
D +H PF+H K VP + P + F PPC + I
Sbjct: 170 ADPSHVPFSHHGIQGDREKARPVPIKIIESLPHRIQATVEIRKGTTITFEPPCHLEYNIS 229
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
+ GK G T C+P K+R++ + +FA H+ W H
Sbjct: 230 VGDQGKQVGLVT-----------YCIPVMPGKSRIVAQFPRNFAKTFHHL--TPRWWNHI 276
Query: 477 AEQ--VLNEDLRLV------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 528
E+ VL+ D+ L+ L Q+E+ + + +P D+L +R W D +G Q
Sbjct: 277 MERNAVLDGDMILLQQQEYFLRQREQQESWKTAYKMPTSADRLVTEFRNWFDKYCQG--Q 334
Query: 529 LPF 531
LP+
Sbjct: 335 LPW 337
>gi|78184439|ref|YP_376874.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
gi|78168733|gb|ABB25830.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
Length = 438
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 52/311 (16%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIF---RGKDGIPGCVQNTCAHRACPLHLGSVN-E 273
W+P+A+ DL F E VI+ + + + C HR PL G +N E
Sbjct: 9 WWPIAYLQDLDRRQPNRFTLLERDLVIWWDAQAEQHSWRVFPDVCPHRLVPLSEGRINDE 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPG-----D 322
G ++CPYHGW + +G C +P + R + SLP +G++++W G +
Sbjct: 69 GLLECPYHGWSFDGEGHCRSIPQATDNTKPEARRSRCSSLPTATGQGLLFVWTGEPDSAN 128
Query: 323 EPPTATIPCLLP-PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPS 381
+ P +P L P+ + + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 129 QHPLPLVPALEEDPTSWTLQ-DTFRDLPMDAVTLLENVLDVSHVPFTHHKTVGNRNNASP 187
Query: 382 LVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL--HQ 437
++ +T + G +W+ P + GKL Q TR A L H
Sbjct: 188 VLATITREAEDGFDAFWEEGP------------------RRGKLGSQTTRFQAPQLMWHD 229
Query: 438 LHV-----------CLPSSRKKTRLLYRMSLDFASVL-KHVPFMQYLW-RHFAEQVLNED 484
L +P R + RL R F S K + ++ W +H + ED
Sbjct: 230 LTAKGFARILTVVYAVPIRRGECRLFARFPFQFQSAAPKLLIGLRPRWLQHIGNHKVLED 289
Query: 485 LRLVLGQQERM 495
++ L QER+
Sbjct: 290 DQVFLHWQERV 300
>gi|434388981|ref|YP_007099592.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019971|gb|AFY96065.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 321
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ V F + + + V++R DG + N C HR L G +
Sbjct: 3 KNLWYAVEFCNAIGTSPKL-LKILDRELVLYRTADGRIRAIDNNCIHRGAALANGWIEND 61
Query: 275 RIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDE-----P 324
I CPYHGW+Y TDG C K+PS T + K+ P E+ G IW++ GDE P
Sbjct: 62 CIVCPYHGWQYQTDGTCSKIPSQAATATIPKPAKMAVYPVGEKYGWIWLFLGDEMAGEIP 121
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P L + I E E +L+N LD AHAPF H+ F
Sbjct: 122 TIPNFPQLESDAIRSIQGEFYWNANYER--VLENGLDFAHAPFVHSGAFGN 170
>gi|347528258|ref|YP_004835005.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136939|dbj|BAK66548.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 351
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ +S D + EP V++R +G +++ C HRA PL G
Sbjct: 3 VRNCWYMAGWSKDFTGTDVQSVSILNEPLVMYRADNGSLVALEDRCPHRAAPLSKGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATI 329
++C YHG + DG C +P + ++V ++S E++G W+W G D A I
Sbjct: 63 NDLRCMYHGIMFGPDGACTDLPGQPVIPKSVCVRSYNVIEKDGCAWVWMGEADRLDFALI 122
Query: 330 PCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P + P + + +++ E LL+DNLLD++HAP+ H +TF
Sbjct: 123 PNFIGPDHPDWAITQSQLDIDAEGQLLIDNLLDVSHAPYVHEATFG 168
>gi|339503621|ref|YP_004691041.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338757614|gb|AEI94078.1| putative vanillate O-demethylase oxygenase subunit [Roseobacter
litoralis Och 149]
Length = 356
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 33/268 (12%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T ++N W+ A+ST++ DD + F +P ++FR DG +++ C HR PL +G
Sbjct: 2 TTLVRNAWYVAAWSTEI-DDELRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGK 60
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+QC YHG + TDGKC ++P Q R + + + P E+ G++WIW G EP A
Sbjct: 61 RIGDTVQCGYHGLTFDTDGKCVRVPG-QDRIPLSACVDAYPIEERSGIVWIWMG-EPERA 118
Query: 328 TIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VP 380
+ F +H + + + + +NL+D AH F H +T S VP
Sbjct: 119 NPDDIFDLPQFHDDSWHMHHGGALHIESNYLNVAENLVDPAHVSFVHETTLGNSASENVP 178
Query: 381 SLVK-------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
V F G G D + R PC G +
Sbjct: 179 VHVSTEGEEIIAWRWIRDSEPIGFFKAFGGFTGNVDRWHY-YHLRLPCTAYIDFGSADAT 237
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKT 449
+ ++ R T + LH P + T
Sbjct: 238 REIAEDDRDSGTRILALHFMTPVTETYT 265
>gi|319792598|ref|YP_004154238.1| rieske (2fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
gi|315595061|gb|ADU36127.1| Rieske (2Fe-2S) iron-sulfur domain [Variovorax paradoxus EPS]
Length = 369
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 44/319 (13%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ +++ + C ++ V+FR DG +++ C HR PL LG +
Sbjct: 11 NAWYAAAYDVEVRHALLSRTICNQKV-VLFRRTDGQVAVLEDACWHRLMPLSLGRLEGDE 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG Y++ G+C MPS + N ++S P E+ +WIWPGD P P L+
Sbjct: 70 LVCGYHGLVYNSQGRCTHMPSQETLNPSACVRSFPVVEKHRFVWIWPGD--PAKADPALV 127
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + ++ + ++ L++DNL+DL H F H S+ G
Sbjct: 128 PDMHWNDDPAWAGDGKMIRVNCDYRLVVDNLMDLTHETFVHGSSIGNREVAEAPFVATHG 187
Query: 377 WSVPSLVKFLTP-------------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG-- 421
++ +++ A G G D + I + F PC V +G+++ G
Sbjct: 188 DRSATVTRWMEGIDAPPFWGGQIRHARGYTGKVDRWQI-IRFEGPCTVNIDVGVAEAGSG 246
Query: 422 ---KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
K R + + L+ P + K + + ++ + + + R
Sbjct: 247 AVPKDGNPGDRSKGVNGYVLNTITPETDKTCLYFWAFARNYCLGEQR---LTHELREGVA 303
Query: 479 QVLNEDLRLVLGQQERMNN 497
+ ED ++ QQ+ M++
Sbjct: 304 GIFREDELVLEAQQKAMDD 322
>gi|308811733|ref|XP_003083174.1| slr1747 (ISS) [Ostreococcus tauri]
gi|116055053|emb|CAL57449.1| slr1747 (ISS), partial [Ostreococcus tauri]
Length = 405
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 53/300 (17%)
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVK--IKSLPCFEQEGMIWIWPG-- 321
G ++C YHGW ++ +GKC +P T L++ + + + PC E++GM+W++P
Sbjct: 5 GELECGYHGWTFTGEGKCTSIPQIEPGAGLETALKSPRACVAAYPCVEKQGMLWVYPTAK 64
Query: 322 DEPPTATIPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
D+ P AT+P L L P + ++ ++ +LP++ LL+N++D++H PFTH ++ K
Sbjct: 65 DKAP-ATLPELPLIPEIDDPDCVYQDVFRDLPMDWATLLENVMDVSHVPFTHHNSVGKRE 123
Query: 378 SVPSLVKFLT-----PASGLQGYWDPYPID-------MEFRPPCMVLSTIGISKPGKLEG 425
+ + LT ASG QG W P EF+ P ++ T+
Sbjct: 124 NATPVNLELTSADGVSASGFQGMWQEGPRKGKYGSQYTEFKAPTLMRHTL---------- 173
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY--LWRHFAEQVLNE 483
R A + +P++ + RLL R F S L F Y + H + + E
Sbjct: 174 ---RTEAFTTLTVVYAVPTTPGRCRLLARFPFIFKSALPRFFFGLYPQWFSHTNQNSILE 230
Query: 484 DLRLVLGQQERM---------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 534
D ++ L +QER+ + A +P D +R W + G P P
Sbjct: 231 DDQIFLHKQERLIEVDQKIKGKSYAQSCYMPTKADVYVSAFRKWITEIAGGGPAWPLGMP 290
>gi|307153246|ref|YP_003888630.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
gi|306983474|gb|ADN15355.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
Length = 482
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 32/341 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHR 262
+G + P + W+P+ + DL F + VI+ K+ V + C HR
Sbjct: 37 AGGLDPTRFDPQEAWYPIHYVKDLDKTKPTSFTLLDRKLVIWWDKNADQWRVFDDQCPHR 96
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP----STQLRNVK---IKSLPCFEQEG 314
L G +NE G I+CPYHGW +S GKCE +P T+ + K + SLP +G
Sbjct: 97 LALLSEGRINEEGLIECPYHGWTFSGSGKCEFIPQQPQGTKAEDSKRACVNSLPVSVCQG 156
Query: 315 MIWIWPGD--EPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+++ +PG+ P +P + P SG + + +LP + +L+N+LD +H P+TH
Sbjct: 157 LLFTYPGNPENAPKVRVPIIEPLEDNSGEWVCIDTFRDLPYDALTVLENVLDSSHVPYTH 216
Query: 370 TSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
T + + V+ SG +G+ W+ P + TI I+
Sbjct: 217 HGTVGNRQNA-APVELEIVKSGREGFIGAWEEGPR----KGTLGRQDTIFIAPNFMYHDL 271
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNED 484
++Q L ++ P S+ K RL R FA+ L + + H + + ED
Sbjct: 272 TSKQFGRTLTVVYAT-PISKGKCRLFARFPFKFAAKLPGLFINLTPRWYSHTNQNTILED 330
Query: 485 LRLVLGQQERM---NNGANVWN----LPVGYDKLGVRYRLW 518
++ L QER G+ +N LP D R W
Sbjct: 331 DQIFLHYQERFLEQAGGSQKFNKAFYLPTKADTYVSALRQW 371
>gi|221210451|ref|ZP_03583431.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|421478825|ref|ZP_15926554.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|221169407|gb|EEE01874.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|400223985|gb|EJO54251.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 347
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D + E V FR +G +++ C HR PL LG+V +
Sbjct: 3 LKNAWY-VACTPDEFASKPLGRQICGERMVFFRDGEGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGKC MP ++ + I+ P E+ G +W+WPGD P P
Sbjct: 62 GHLVCGYHGLTMGADGKCTSMPCQRVGGIPAIRRYPAVERYGFVWVWPGD--PAQADPAT 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ P + + + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 IHPLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|330992786|ref|ZP_08316730.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
gi|329760264|gb|EGG76764.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL++FW+ + +L D F + V++R +DG P V + C HR+ L G+V
Sbjct: 10 RLRDFWYCLFPMHELSDAPRA-FRLLGQDIVVWRDEDGRPHAVIDRCPHRSARLSGGTVE 68
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
EGRI CPYHGW + DG+C +P + +K+L C E+ G +W+ PG+ P +
Sbjct: 69 EGRIVCPYHGWAFRGDGRCVSVPQSVTNAGPQFGVKALHCTERYGQVWVCPGE--PAFDL 126
Query: 330 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
P + G+ E + +++N D AH F H +F P+
Sbjct: 127 PHVPHFEKPGYRQIFEFSEDWACSAQRIIENEFDTAHFSFVHKGSFGDSDPAPARTDITE 186
Query: 388 PASGL 392
+G
Sbjct: 187 TETGF 191
>gi|221215639|ref|ZP_03588601.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
gi|221164468|gb|EED96952.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD1]
Length = 363
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 133/337 (39%), Gaps = 39/337 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ + ++ + P P V++R DG +++ C HR PL LG++N
Sbjct: 10 NAWYVAGWDHEIGRQ-LTPRKVCGIPIVVYRKVDGSAAALEDACWHRLLPLSLGTLNGDD 68
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG ++ DG+C +MPS + N ++S P E+ +W+W GD E IP
Sbjct: 69 VVCGYHGLVFAPDGRCVQMPSQETLNPSACVRSFPVVERHRFVWVWMGDPLEADETLIPD 128
Query: 332 LLPPSGFEIHAE-IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVK 384
L E + L ++ LL+DNL+DL H F H S+ ++V K
Sbjct: 129 LFQNDSVEWAGDGGTTHLQCDYRLLIDNLMDLTHETFVHHSSIGNRAVAEAPFTVSRTEK 188
Query: 385 ---------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEG 425
F G +G P+D + F P V +G++ G
Sbjct: 189 TVEVTRWMVNIDPPPFFKKHLGKEG-----PVDRWQHITFHAPSTVTIDVGVAPTGTGAP 243
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
+ R +HV P + + + ++ + + WR + ED
Sbjct: 244 EGDRSQGITGFVIHVSTPETETSCIYYWAIVRNYKLTSQR---LTTEWREAVRSIFAEDK 300
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 522
++ QQ ++ + P+ D + R + D +
Sbjct: 301 AILEAQQAAVSRYPDRDFYPLNIDGGAILARRYIDQM 337
>gi|218439920|ref|YP_002378249.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218172648|gb|ACK71381.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 367
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 189 LDIVKGKLPRKSLNVSGPVQPYNTRLK------NFWFPVAFSTDLKDDTMVPFDCFEEPW 242
+ + K +L ++ QP R++ N+W+PVA+S LK ++P +++
Sbjct: 1 MSVRKSELLNMESTITLSSQPVQNRVREIGINPNYWYPVAWSHQLKPCQILPVVVWQQAI 60
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQ 298
++R + ++N C H+ G V E + CPYHGWE++ +G+C K+ P +
Sbjct: 61 AVYRDVNHQLHALENACPHKGVVFDKGEVFETHLVCPYHGWEFNGEGECVKIPYLPPEQK 120
Query: 299 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELP----IEHGL 354
L K ++ P E+ G+IWI+PGD P A + + + +++E+P +
Sbjct: 121 LPCAKARNYPIQEKYGIIWIFPGD-PSLAELKTIPDVPEYNESEWLIVEIPAHFQAHFSI 179
Query: 355 LLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGY-------WDPYPIDMEFRP 407
+N +D+ H F H +GW P L + + + W +++
Sbjct: 180 CNENTMDVFHG-FLHRDI--QGWFNPILTQLKAKKNTVHAQYQVSYRGWLSKFLNLNKDE 236
Query: 408 PCMVLSTIGISKP-----GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSL-DFAS 461
+ T+ I+ LEG ++ +L +L V L +R + L ++ L +
Sbjct: 237 NQVTTRTVSITYNYPHYHSTLEGVSS----LYLMRLPVSLTETRSFSLLFIKLRLPKWVV 292
Query: 462 VLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE 493
L Q +W ++ L++D+ ++ +Q+
Sbjct: 293 NLIRGQLSQIIWHFLFKKFLDQDIEMIESEQQ 324
>gi|427725393|ref|YP_007072670.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427357113|gb|AFY39836.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 439
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 44/331 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+PVA DL +P VI++ + V + C HR PL G ++E
Sbjct: 10 WYPVALLEDLDPSAPKAITILGKPLVIWKPRAQQKYSVFLDKCPHRLAPLSEGRIDEKSD 69
Query: 275 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP- 325
R+ C YHGWE+ G C+++P + N + S P ++ ++W+W + P
Sbjct: 70 RLMCSYHGWEFDEAGSCQRIPQLGQPEILEKRRDNFCVVSFPVQTEQDLLWVWLDETTPD 129
Query: 326 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH-----TSTFA 374
A +P L P+ GF + + ++ + L++N++D +H PF H A
Sbjct: 130 LAAEMPLPLSPNISETKGF-VWSTYARDVDYDWTTLVENIVDPSHVPFAHHGLQGKREMA 188
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
K + + +T G + ++ F+PPC+V I GK G T
Sbjct: 189 KPLTFEIISSEMTCIEG--KVTSGFKTNITFKPPCLVEYEIPFPS-GKQVGLVT------ 239
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 494
C+P+S K RL+ +FA L + + R V++ D+ ++L +QE
Sbjct: 240 -----YCVPTSPGKARLIAFFVRNFAKQLGRLIPRWWEHRQTRNAVIDSDM-IILQRQEY 293
Query: 495 MNNGA-----NVWNLPVGYDKLGVRYRLWRD 520
N+ + + + +P D+ + +R W D
Sbjct: 294 FNHQSSESWKDAYKMPAEADRFVIEFRRWFD 324
>gi|339328975|ref|YP_004688667.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
gi|338171576|gb|AEI82629.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
Length = 351
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 43/323 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVN 272
L N W+ A ST++ + + + +I+R +D G P + + C HR PLHLG +
Sbjct: 8 LMNAWYVAALSTEVGPEELFHRKILDVSVMIYRKQDDGTPVAMHDRCPHRFAPLHLGKRH 67
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ CPYH + G C P + +K+ P E+ G +WIW GDE P
Sbjct: 68 GDEVSCPYHALRFDCLGTCTHNPHGTGHIPKAASVKTFPLAEKYGFVWIWMGDEAPDLK- 126
Query: 330 PCLLPP-SGFEI-HAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSL 382
LLP S +I HA V M +P+ + L++DN++DL+H H +G P +
Sbjct: 127 --LLPDYSELDIGHANAVGYTYMHMPVNYELIIDNVMDLSHIDHVHGEIITTRGKLSPVI 184
Query: 383 VKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPG 421
K + W+ P P D+ + PP + ++ G
Sbjct: 185 PKVADVQRTVNARWEWTQSPAMMIFANFLPQPEEEARHYFDITWAPPANIQLSV-----G 239
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
++G+ + + LH P ++ T + + M+ H A +
Sbjct: 240 AVQGEMSFDDYIGQYDLHTTTPETQGSTHYFFATRRNHIVEDGDYNKMKIQAMHGAFE-- 297
Query: 482 NEDLRLVLGQQERMNNGANVWNL 504
NED ++ Q M + AN ++L
Sbjct: 298 NEDGPIISAVQREMGD-ANFFDL 319
>gi|372270603|ref|ZP_09506651.1| Rieske (2Fe-2S) domain-containing protein [Marinobacterium stanieri
S30]
Length = 377
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+ VA S ++ D ++ + V+FR +DG P + N C HR+ PL ++
Sbjct: 25 IYNEWYVVALSREI-DRELMARTVLDRQLVLFRKEDGTPVALDNRCGHRSFPLSRSALEG 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST-QLRNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 330
+ C YHG Y +G+C ++PS + I+S P +Q ++WIW G +E + IP
Sbjct: 84 DTVVCGYHGLRYDENGQCVEVPSQCSCAGISIRSYPLHQQGPVVWIWMGEPEEADISKIP 143
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ + +E M L + L +NLLDL H F H TF
Sbjct: 144 AMPMLEEGWVTSEDYMPLKASYVYLHENLLDLTHLSFLHAKTFG 187
>gi|397588210|gb|EJK54188.1| hypothetical protein THAOC_26247 [Thalassiosira oceanica]
Length = 855
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 154/349 (44%), Gaps = 46/349 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 272
+ W+ VA+ +K+ + + EP V++R DG C ++ C HR+ PL +G +N
Sbjct: 392 FNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDVCPHRSAPLSMGKIND 451
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----------IKSLPCFEQEGMIWIWPG 321
EG+++C YHGW + DG E +P TQ+R+ +K+ E EG+IWIW G
Sbjct: 452 EGQLECMYHGWGFGKDGNIESIP-TQIRDGGSSKRSPPKRSCLKTYCVEEHEGLIWIWRG 510
Query: 322 D--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
+ E + +P S + I + V++ ++ +++N LD H + H + S+
Sbjct: 511 ELLEADASKLPKTRDVSTYPI--DTVLDYNVDWQYIVENNLDSPHLFWLHNGSVPPVRSL 568
Query: 380 PSLVKFLTPASGLQGYWDP-----YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ V+ LQ + D Y +P + + I + G ++
Sbjct: 569 -NFVREKVNQVKLQYFRDDSGHGHYGQTAGGKPKIVRFDSPNIVRHGG--------TSSF 619
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLK---HVPFMQY-------LWRHFAEQVLNED 484
+ H+ +P + +TR+L R +L +L +P + LW + + ED
Sbjct: 620 SEEFHI-VPIAPGRTRVLLRQNLPKGPILTTALSIPGADFVLEKLVNLWNY---HIALED 675
Query: 485 LRLVLGQQERMNN-GANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFM 532
++ GQ +++ GAN ++ D L + W++ LPF
Sbjct: 676 YSVMQGQAHNVDDLGANHLSVGDLGDDLIKHFYKWKEHAVANDGALPFF 724
>gi|386335217|ref|YP_006031387.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
gi|334197667|gb|AEG70851.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
Length = 342
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG +G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGPEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 329
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPARIH 121
Query: 330 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 376
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEG 181
Query: 377 WSVPS--LVKFLTP----ASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGK 422
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 182 DTVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|443474699|ref|ZP_21064670.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
gi|443020589|gb|ELS34534.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
Length = 480
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 134/319 (42%), Gaps = 43/319 (13%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 262
+G P + W+PV + DL F E VI+ + + C HR
Sbjct: 31 AGGRDPDRFDWQEVWYPVFYLEDLDKTKPAKFTLLERDLVIWWDRHSNAWQAFDDRCPHR 90
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 314
PL G + E G ++CPYHGW + DG C+++P + + + SLP E++G
Sbjct: 91 LVPLSEGRIAEDGLLECPYHGWAFKGDGSCDRIPQQPEGGTAHTSKRACVSSLPTAERQG 150
Query: 315 MIWIWPG--DEPPTATIPCLLPPSGFEIHAE------IVMELPIEHGLLLDNLLDLAHAP 366
+++I+ G + P IP + P E + +LP + LL+N+LD +H P
Sbjct: 151 LLFIYAGKPENAPQVKIPIIEP---LETETDKWTLFGTFRDLPYDAITLLENVLDASHLP 207
Query: 367 FT-HTSTFAKGWSVPSLVKFL-TPASGLQGYWDPYP-------IDMEFRPPCMVLSTIGI 417
FT H S + + P ++ L T G +G W+ P D F P ++ +
Sbjct: 208 FTHHKSVGNRANAAPMFLEVLETEKYGFKGTWEEGPRRGKLGRQDTTFIAPSLMWHDL-- 265
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRH 475
++Q + ++ P+ + + RL R F+S + + + H
Sbjct: 266 ---------TSKQFGRTITAVYAT-PTRKGECRLFARFPFQFSSAIPRFFIGITPRWYSH 315
Query: 476 FAEQVLNEDLRLVLGQQER 494
+ + ED ++ L QER
Sbjct: 316 IGQNGILEDDQIFLHYQER 334
>gi|421896325|ref|ZP_16326722.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
gi|206587490|emb|CAQ18072.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum MolK2]
Length = 342
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 30/238 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG +G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGPEGKVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 329
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 330 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------------G 376
S + + + ++ L++DNL+DL H + H ++ + G
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAPQTRVEG 181
Query: 377 WSVPS--LVKFLTP----ASGLQGYW--DPYPID----MEFRPPCMVLSTIGISKPGK 422
+V + ++ + P A+ L+G D P D F PP VL +G++ GK
Sbjct: 182 DTVVTSRFMENIMPPPFWATALRGAGLADNVPCDRWQICRFTPPSHVLIEVGVAHAGK 239
>gi|238023772|ref|YP_002908004.1| phenylpropionate dioxygenase [Burkholderia glumae BGR1]
gi|237878437|gb|ACR30769.1| Phenylpropionate dioxygenase [Burkholderia glumae BGR1]
Length = 374
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+P+A+S +LK + +P V+FRG G +++ CAHR PLH G V+
Sbjct: 32 DFWYPLAWSRELKRGKTLGVHFAGDPIVLFRGDSGTVFALEDRCAHRQVPLHAGVVDGDA 91
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 327
++C YHGW Y GKC +P +L N ++S PC E +G+I+++ G DE P
Sbjct: 92 LRCGYHGWTYDCSGKCVDVPYLGKERLPN-GVRSYPCREVQGLIFVFTGDLALADEKPVP 150
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+P + P E+ + + +NL+D+ H F H
Sbjct: 151 ALPTVSDPK--YKTRRFGREVKCHYSFMHENLMDMNHQ-FLH 189
>gi|393778405|ref|ZP_10366679.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
gi|392714676|gb|EIZ02276.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
Length = 372
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 10/161 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 272
++N W+PV FS + K + ++P VI+R +G + C H+ PL ++
Sbjct: 7 VRNTWYPVGFSHEFKAGDLQGLKVADKPIVIWRTAEGEVVAFDDRCCHKRFPLSESKLLD 66
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTAT 328
+GR++C YHG Y + GKC ++PS + + ++ ++P EQ+G++W+WPGD +T
Sbjct: 67 DGRLECAYHGLCYDSSGKCVEIPSQPDKAIPPQARLHTVPIKEQDGVVWLWPGDVEQAST 126
Query: 329 I-----PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 364
+ P L S + +E P + LL++NLLD++H
Sbjct: 127 LNPPRTPELTDTSCVTAVSPERIEAPANYLLLIENLLDISH 167
>gi|298489953|ref|YP_003720130.1| Rieske (2Fe-2S) domain-containing protein ['Nostoc azollae' 0708]
gi|298231871|gb|ADI63007.1| Rieske (2Fe-2S) iron-sulfur domain protein ['Nostoc azollae' 0708]
Length = 353
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N L+N W+ S LK MV EEP ++ R KDG V++ C HRA PL G
Sbjct: 5 NILLRNIWYYALPSYLLKPGKMVAKILLEEPILLIRNKDGQVSAVRDICPHRAVPLSCGR 64
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD-- 322
N ++C YHGW + G+C ++PS T L ++S P E +G IWI+ D
Sbjct: 65 FNGQEVECCYHGWRFDPKGRCVEIPSLLPEQNTDLSRFDVQSYPIQETQGNIWIYMSDGD 124
Query: 323 ----EPPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKG 376
P +P + + H V+ P I+H + L+D AH+P+ H + +
Sbjct: 125 KYKPSPVENEVPIVSGVIEQQPHLVEVIRFPCFIDHA--VTGLMDPAHSPYVHRVWWWRS 182
Query: 377 WSVPSLVKFLTPA 389
+ VK P+
Sbjct: 183 GELHEEVKEFDPS 195
>gi|42524666|ref|NP_970046.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
gi|39576876|emb|CAE78105.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 210 YNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
Y+ LKN W+ S +L + EP V +R G +++ C HR PL G
Sbjct: 2 YSGFLKNVWYVGIPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYG 61
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 323
V +I+CPYHGW++ G C ++PS +K++S P E +G+IW++ GD+
Sbjct: 62 RVVNDQIECPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDK 121
Query: 324 PPTATIPCLLP-----PSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTF 373
+ +P P+ + + V+ P ++H ++ L+D AH P+ H S F
Sbjct: 122 DYDVSKAPAIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWF 176
>gi|229590745|ref|YP_002872864.1| oxidoreductase subunit alpha [Pseudomonas fluorescens SBW25]
gi|229362611|emb|CAY49519.1| oxidoreductase alpha subunit [Pseudomonas fluorescens SBW25]
Length = 353
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 44/244 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG++G V++ C HR PL LG V+ G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEK-MVFYRGQEGAVVAVEDFCPHRGAPLSLGYVDNG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ + P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--SQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ +QG +W D P+D F PP VL +G++
Sbjct: 176 VTTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGK 422
GK
Sbjct: 236 HAGK 239
>gi|451942886|ref|YP_007463522.1| vanillate O-demethylase oxygenase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451902273|gb|AGF71160.1| vanillate O-demethylase oxygenase [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 373
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 139/356 (39%), Gaps = 52/356 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + +P ++R +DG + + C HR PL G + GR
Sbjct: 20 NAWYVAAWDHEVTSKGITSRTIANKPLALYRTQDGRAVALADACWHRLAPLSKGKLT-GR 78
Query: 276 --IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
IQCPYHG Y++ G+C MP+ + N + S P EQ IW+W GD PT P
Sbjct: 79 DGIQCPYHGLVYNSAGRCMSMPAQETLNPSAAVPSYPVVEQHRYIWVWLGD--PTLADPT 136
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 376
L+P H + + + L+LDNL+DL H F H ST +
Sbjct: 137 LVPDMHQMDHPDWTGDGKTIAAACNYQLVLDNLMDLTHEEFVHASTIGQDELSESDFEVT 196
Query: 377 --------------------WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
W KF G +G D + I + + P + +G
Sbjct: 197 HTEDSVTVSRWMHDIDAPPFWQKNMNDKF----PGFEGKVDRWQI-IHYYYPSTICIDVG 251
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
++K G + R + + ++ P S + + + ++ + + R
Sbjct: 252 VAKAGTGAPEGDRSQGVNGYVMNTITPESDRSSHYFWSFQRNYRLDSQ---LITTQLREG 308
Query: 477 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 530
V ED ++ QQ+ + N ++L + + VR L + +G +P
Sbjct: 309 VHGVFGEDEDMLTAQQDAIDANPDHEFYSLNIDAGGMWVRRILEKALAAEGRLDIP 364
>gi|425442274|ref|ZP_18822528.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
gi|389716788|emb|CCH99015.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
Length = 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 30/329 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGFIYHDLTSEKFGRTLTA 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|254514746|ref|ZP_05126807.1| vanillate demethylase A [gamma proteobacterium NOR5-3]
gi|219676989|gb|EED33354.1| vanillate demethylase A [gamma proteobacterium NOR5-3]
Length = 346
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 146/337 (43%), Gaps = 44/337 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ A S +++ + C + V+FR +G +++ C HR PL LG+V G
Sbjct: 9 KNCWYVAATSDEIEAKPLGRIVCGKS-MVLFRAAEGQVAALEDFCPHRGAPLSLGTVANG 67
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTAT--IP 330
+ C YHG + DGKC M + + + I++ P E+ G IW+WPGD IP
Sbjct: 68 LLVCGYHGMRMNADGKCAGMAGQSVEHFRKGIQTYPAIERHGYIWVWPGDAALANADLIP 127
Query: 331 CL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVP--- 380
L P F + + ++ LL+DNLLDL H + H S+ + + P
Sbjct: 128 DLHWARSPDWAF---GGGMFHIRCDYRLLIDNLLDLTHETYVHASSIGQPEIEEAAPDTL 184
Query: 381 ------SLVKFL--TPA-----SGLQG-YWDP-YPID----MEFRPPCMVLSTIGISKPG 421
S+ +F+ PA L+G DP P+D F PP V+ +G++ G
Sbjct: 185 RKDHHVSVSRFMEDIPAPPFWQDALKGNNLDPDLPVDRWQVCRFSPPGSVMIDVGVAHAG 244
Query: 422 K--LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
+E R+ + + + + P + + M+ +F + + + R +
Sbjct: 245 HGGIEAPVERRASGIV--VDLITPETETSCWYFWGMARNFN--VTDLALTDSI-RDSQLK 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ EDL ++ QQ + + + D+ GV R
Sbjct: 300 IFTEDLEMLESQQRNLEANPERRLMSLNIDRGGVEAR 336
>gi|399071851|ref|ZP_10750106.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398043032|gb|EJL35974.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 352
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 41/281 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ +A+S +++ ++ +P V +R + G + + C+HR PL LG
Sbjct: 3 LKNCWYALAWSHEVQGAGLLARKVIGQPLVAYRTEGGEAAVLIDRCSHRFAPLSLGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG + T G C P + N+ I+S P E+ +IW+W G+ P+ P
Sbjct: 63 DTLRCMYHGLVFDTQGACVLEPGRKRPSPNMAIRSYPVVERYKLIWVWMGE--PSLADPD 120
Query: 332 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV----- 379
L+P P+ I A I ++ L++DNLLD +H F H +T ++
Sbjct: 121 LVPDCHWQDDPAWRSIPAYI--HYKADYRLIMDNLLDFSHLSFVHENTLGGSLAIAETAP 178
Query: 380 ------------------PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP- 420
P L +L + +QG D + I E+ P VL+ S P
Sbjct: 179 LIEQIDKTVRITRWYRNEPDLAPYLKGVAEIQGPIDRWNI-YEWHMPGNVLNMDSGSAPA 237
Query: 421 --GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 459
G EG + A H + P K + + +F
Sbjct: 238 GTGAPEGHRVPE-ALQFHATQIVTPEDGKNSHFFWSYGHNF 277
>gi|209965428|ref|YP_002298343.1| Rieske [2Fe-2S] domain-containing protein [Rhodospirillum centenum
SW]
gi|209958894|gb|ACI99530.1| Rieske [2Fe-2S] domain protein [Rhodospirillum centenum SW]
Length = 344
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++ W+ LK M+ EP + RG DG +++ C HR PL G +
Sbjct: 8 LQDLWYFALPGRALKRGRMLAKTLLGEPVLFGRGADGAAFALRDICPHRGIPLSCGRFDG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIW-----PGD 322
++C YHGW + DG C +PS L ++++S P E G +WIW P
Sbjct: 68 REVECCYHGWRFGADGGCTAIPSLVEGQAFDLSRIRVRSYPVRELNGNVWIWMGSGEPDG 127
Query: 323 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
EPP +P P ++ + ++H ++ L+D AH PF H S F
Sbjct: 128 EPP--AMPGFAPDRAADMVEVMAFPCFVDHAVI--GLMDPAHGPFVHRSWF 174
>gi|426405189|ref|YP_007024160.1| oxidase-like protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861857|gb|AFY02893.1| oxidase-related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 346
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 15/177 (8%)
Query: 210 YNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
Y+ LKN W+ S +L + EP V +R G +++ C HR PL G
Sbjct: 2 YSGFLKNVWYVGLPSAELAVNKATARKILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYG 61
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 323
V +I+CPYHGW++ G C ++PS +K++S P E +G+IW++ GD+
Sbjct: 62 RVVNDQIECPYHGWKFDGTGMCTEIPSLCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDK 121
Query: 324 PPTATIPCLLP-----PSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTF 373
+ +P P+ + + V+ P ++H ++ L+D AH P+ H S F
Sbjct: 122 DYDVSKAPAIPVMKAFPADVKPNLTYVVNFPCHVDHAVI--GLMDPAHGPYVHKSWF 176
>gi|186686519|ref|YP_001869715.1| pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
gi|186468971|gb|ACC84772.1| Pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
Length = 482
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 36/343 (10%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 262
+G + P + + W+PV + DL PF E+ V++ K+ + C HR
Sbjct: 27 AGGLDPDSFDCQEVWYPVCYIEDLNKSQPTPFTLLEQNIVLWWDKNEQTWRAFIDQCPHR 86
Query: 263 ACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQE 313
PL G +N EG ++CPYHGW +S GKCE +P Q++ K + +L +
Sbjct: 87 LAPLSEGRINHEGWLECPYHGWAFSGTGKCEFIPQ-QIQRTKAEVSQRACVATLATAVYQ 145
Query: 314 GMIWIWPG--DEPPTATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 367
GM++++PG + +P + P P G+ I ++P + L++N+LD +H P+
Sbjct: 146 GMLFVYPGRAENAAKTKVPIVEPLEQDPDGW-ICLNTFRDVPYDALTLMENVLDTSHIPY 204
Query: 368 THTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
TH T +V P ++ + G +G W P R + PG +
Sbjct: 205 THHRTVGNRANVSPIDLEIIESGKWGFKGTWAEGP-----RKGTLGRQDTTFIAPGLMWH 259
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLN 482
T + + P + + RL R F+S L + F++ + H + +
Sbjct: 260 DLTSKQYGRTLTVVYATPIRKGECRLFARFPFKFSSNLPGL-FLKLTPRWYSHIGQNRVL 318
Query: 483 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
ED ++ L QER N + LP D + R W
Sbjct: 319 EDDQIFLHYQERYLEKLGGSANFTKAFYLPTKADLFVFQLRSW 361
>gi|440696445|ref|ZP_20878913.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
gi|440281329|gb|ELP68959.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
Length = 354
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 41/288 (14%)
Query: 209 PYNTRL-KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPL 266
P+ T +N W+ A+S ++ + ++ EP V +R +D G P + + C HR PL
Sbjct: 2 PHTTAFARNQWYVAAYSHEVGRE-LLGRTILGEPLVFYRTEDEGTPVALADRCVHRRYPL 60
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP 324
++ RI C YHG+ Y T G C +P + R ++ S EQ+ +IW+W GD P
Sbjct: 61 SESGLDGDRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYQVVEQDALIWVWIGD-P 119
Query: 325 PTA---TIP---CLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH-------- 369
A TIP L P + ME + ++GLL+DNLLDL+H + H
Sbjct: 120 ALADADTIPRARHLDSPGWVTVKG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPE 176
Query: 370 ------TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLST 414
+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 177 VAETPINTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLH 235
Query: 415 IGISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
I+ G L E + H + PS+ K + +S D+A+
Sbjct: 236 SRIAPVGVLPEADGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWAT 283
>gi|392944484|ref|ZP_10310126.1| ring-hydroxylating dioxygenase, large terminal subunit [Frankia sp.
QA3]
gi|392287778|gb|EIV93802.1| ring-hydroxylating dioxygenase, large terminal subunit [Frankia sp.
QA3]
Length = 373
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++ W PVA S ++ D+ VP EPWVI R DG+ + C HR PL G VN
Sbjct: 12 LRHGWHPVARSGEVADEP-VPVRLLGEPWVIARLDDGL-AAFADRCPHRLAPLSAGRVNA 69
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ C YHGW + G+C +P+ R E+ G+IWI P +EP T
Sbjct: 70 HELVCGYHGWRFVASGECTAVPALGPGVPAPRRARATPPWGVVERHGLIWIAP-EEPFTD 128
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEH----GLLLDNLLDLAHAPFTHTSTFAKG 376
I P E + V P GLL DN LD AH PF H T G
Sbjct: 129 LIEV---PEADEAGFDSVWLEPSRSSACAGLLADNFLDTAHFPFVHADTIGAG 178
>gi|383452944|ref|YP_005366933.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380734627|gb|AFE10629.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 363
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL + WF + S +L D + P V+FRG+ G PG + + C HR PL LG V
Sbjct: 21 RLPHSWFILCTSRELGDRPLA-RTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVT 79
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPST----QLRNVKIKSLPCFEQEGMIWIW--PGDEPPT 326
G+++C YHGW + T G+C +P + R+ S EQ+G +W++ PG EP +
Sbjct: 80 NGQLECGYHGWRFDTGGQCRLIPGLVGEPEARSRCAASYATREQDGFVWVYSTPGVEPTS 139
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
L + V+ P +L+N LD+ H F H F
Sbjct: 140 EPFRFPLLDAADYTTVRRVLRAPGSLHAVLENTLDVPHTAFLHGGLF 186
>gi|166365800|ref|YP_001658073.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
gi|166088173|dbj|BAG02881.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
Length = 460
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 30/329 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + P + I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGKLGQQYSNFIAPGFIYHDLTSEKFGRTLTA 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D YR W
Sbjct: 316 QAQGDSRNFSQACYLPTKADLFVFEYRNW 344
>gi|221200592|ref|ZP_03573633.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|221208419|ref|ZP_03581421.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|421472997|ref|ZP_15921148.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|221171607|gb|EEE04052.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2]
gi|221179164|gb|EEE11570.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Burkholderia
multivorans CGD2M]
gi|400221927|gb|EJO52348.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 347
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D + E V FR G +++ C HR PL LG+V +
Sbjct: 3 LKNAWY-VACTPDEFASKPLGRQICGERMVFFRDGQGTVAALEDFCPHRGAPLSLGTVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGKC MP ++ + I+ P E+ G +W+WPGD P P
Sbjct: 62 GHLVCGYHGLTMGADGKCTSMPCQRVGGIPAIRRYPAVERYGFVWVWPGD--PAQADPAT 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ P + + + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 IHPLHWADDPGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|347529646|ref|YP_004836394.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345138328|dbj|BAK67937.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 350
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 83/173 (47%), Gaps = 11/173 (6%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T ++N W+ ++ DLK DT E VI+R G +++ C HR PL LG
Sbjct: 2 TYVRNAWYVAGWAQDLKADTPFAITILGERIVIWRTASGAIHALEDRCVHRLAPLSLGRC 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
R++C YHG + DG+ +MP Q R +++ P + +W+W GD P
Sbjct: 62 EGERLRCMYHGLLFDPDGRVVEMPG-QDRIPPQARVRHYPVVARHSWLWVWMGD--PARA 118
Query: 329 IPCLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
L+PP+ H + + ++ E L+ DNLLD +H F H ++F G
Sbjct: 119 DESLIPPAVGLDHPDYILGHGQLDYAAEARLINDNLLDFSHLTFVHANSFGSG 171
>gi|119510320|ref|ZP_01629456.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
gi|119465064|gb|EAW45965.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
Length = 445
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 147/344 (42%), Gaps = 46/344 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+P++ D+ P VI++ K V + C HR PL G V+E G
Sbjct: 11 WYPLSPVEDIDPTRPTPVTLLGIRLVIWKPKSSETYQVFLDQCPHRLAPLSEGRVDEKSG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKI---KSLPCFEQEGMIWIWPGDEPPT 326
+ C YHGW++ + G C +P + +N KI SLP + ++W+WP
Sbjct: 71 NLMCSYHGWQFDSQGICTHIPQAEKPEIVTKNEKIFCVISLPVRQANDLLWVWPDANSAE 130
Query: 327 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-GWS 378
A LP S G+ + + V +L + L++N+ D +H PFTH K ++
Sbjct: 131 AAANTPLPLSPQVDADKGY-VWSSYVRDLEYDWETLVENVADPSHVPFTHHGVQGKREYA 189
Query: 379 VPSLVKFLTPASGLQGYWDP--YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
P ++ + S L + + F PPC + I + G+ +
Sbjct: 190 TPIPMEVVQSTSKLIEAMTSGRFKTTITFEPPCRLEYAINLGDSGE----------KKVG 239
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 494
+ C+P S K+R++ + +FA L + W H + VL+ D+ +VL QQE
Sbjct: 240 LVTYCIPVSPGKSRIVAQFPRNFAKTLHRL--TPRWWSHINTRNLVLDGDM-IVLHQQEN 296
Query: 495 -------MNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPF 531
+ + ++ LP D+L + +R W D G QLP+
Sbjct: 297 FLQQRQAVESWKTIYKLPTSADRLVIEFRNWFDKYCFG--QLPW 338
>gi|409096514|ref|ZP_11216538.1| Rieske (2Fe-2S) domain-containing protein [Thermococcus zilligii
AN1]
Length = 319
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 141/331 (42%), Gaps = 50/331 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
WF + S +++ D V F V++R ++G ++++C HR L G V GR+Q
Sbjct: 2 WFAILSSKEVRKDRPVGVVRFGRNIVLWRDENGKVNAIEDSCVHRRARLSAGKVINGRLQ 61
Query: 278 CPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
CP+HG+EY DG+ + +P+ +K+ E+ GMIW+W G+ P
Sbjct: 62 CPFHGFEYDGDGRVKLIPALGRSYRVPERFSVKAYNVAEKAGMIWMWFGEGEPGGE---- 117
Query: 333 LPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
P FE AEI + ++N LD+ H PF H +T +G
Sbjct: 118 --PRFFEDIDKKFACAEIQETWNVPFPRAVENQLDVMHLPFVHRTTIGRGNR-------- 167
Query: 387 TPASGLQGYWDPYPIDME---FRPPCMVLSTIGISKPGKLEGQNTR-------------Q 430
T +G W ID + F V KPG+LEG +R
Sbjct: 168 TLVNGPVVKW----IDGDSFVFYVFNEVDRGQIAKKPGELEGLESRVYLEFIFPNVWQNH 223
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 490
+ + + +P +++KT + R + + + L F + VL++D R+V
Sbjct: 224 ISEKVRVVAFFVPVTKEKTMIYLRFYIKATGIRPLDRLIAKLGMRFNKVVLHQDRRVVET 283
Query: 491 QQERMNNGANV-WNLPVGYDKLGVRYRLWRD 520
Q+ + + V +LP+ + R RL+R+
Sbjct: 284 QEWDIRKDSLVQGDLPI----MEFRKRLYRE 310
>gi|384247255|gb|EIE20742.1| hypothetical protein COCSUDRAFT_67210 [Coccomyxa subellipsoidea
C-169]
Length = 555
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+PVA D+ +P + V+++G DG CV + CAHR PL G V +G IQ
Sbjct: 88 WYPVAILADVDGSKPIPVTLLGKKLVLWQGSDGEWNCVVDRCAHRYAPLSEGRVKDGDIQ 147
Query: 278 CPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
C YHGW+Y+ G+C ++P + + +++ P + G +W+WP P A
Sbjct: 148 CAYHGWQYNGQGQCTRIPQAEDASACCSSSACVEAFPVQLRAGAVWVWPDSSPSAARDSS 207
Query: 332 LLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
L+ PS E + + + L++ LLD + FT
Sbjct: 208 LVLPSVDTVLEESLEYVDWYIRDFYYGYAGLMEMLLDPSACSFT 251
>gi|377811423|ref|YP_005043863.1| Rieske (2Fe-2S) protein [Burkholderia sp. YI23]
gi|357940784|gb|AET94340.1| Rieske (2Fe-2S) region [Burkholderia sp. YI23]
Length = 428
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQNTCAH 261
+GP P + FW P S +L + P E + FR +G G + CAH
Sbjct: 13 TGPGAPMGELFRRFWLPALLSEELAEPGGEPVRLQLLSERMLAFRDSEGKLGLIDEFCAH 72
Query: 262 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMI 316
R L G EG I+CPYHGW+Y +G+C +PS +K+KS P EQ G+I
Sbjct: 73 RGVSLWFGRNEEGGIRCPYHGWKYDVNGQCVDVPSEPAASGYCNKIKLKSYPLVEQGGVI 132
Query: 317 WIWPG---DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
W++ G ++PP P+G + + E L+ +D +H F H+ +
Sbjct: 133 WVYMGPKDEQPPLPAFEFSTVPAGQSFMTKRLQECNWLQA--LEGGVDSSHVSFLHSGSL 190
>gi|323358581|ref|YP_004224977.1| phenylpropionate dioxygenase [Microbacterium testaceum StLB037]
gi|323274952|dbj|BAJ75097.1| phenylpropionate dioxygenase [Microbacterium testaceum StLB037]
Length = 369
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 141/360 (39%), Gaps = 58/360 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NE 273
+N W+ A+ ++ ++ P ++R +DG + + C HR PL G++
Sbjct: 14 RNAWYVAAWDHEVGRKKILARTVAGRPLALYRTEDGRAVALADACWHRLAPLSQGTLMGP 73
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+CPYHG Y + G+C MP+ + N + S P ++ +W+W GD P P
Sbjct: 74 EDIRCPYHGITYDSRGRCTSMPAQETINPSALVPSFPVVDRYRYVWVWVGD--PALADPD 131
Query: 332 LLPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
L+P G IHA P + L+LDNL+DL H F H+S+ G
Sbjct: 132 LIPDMHQMTDAAWTGDGLTIHA------PCNYQLILDNLMDLTHEEFVHSSSI--GQKEL 183
Query: 381 SLVKFLTPAS----------------------------GLQGYWDPYPIDMEFRPPCMVL 412
S +F+T + G G D + I + F P +
Sbjct: 184 SESEFVTSHTDTTVTVERWMHDIEAPPFWLKNMRDKFPGFSGRVDRWQI-IHFEAPSTIC 242
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 472
+G++K G + R + + ++ P + + + + ++ + +
Sbjct: 243 IDVGVAKAGTGAPEGDRSQGVNGYVMNTITPETARSSHYFWSFQRNYRLDSQ---LITTQ 299
Query: 473 WRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLP 530
R V ED ++ QQ + N ++L + + VR L R L +G P
Sbjct: 300 LRDGVHGVFGEDEAMLAAQQAAIDANPDYEFYSLNIDAGGMWVRRILERMLLAEGRDHAP 359
>gi|170737389|ref|YP_001778649.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819577|gb|ACA94159.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 359
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 130/337 (38%), Gaps = 43/337 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ VA + D D + E V++R DG +++ C HR PL LG V +
Sbjct: 3 LKNAWY-VACTPDEIDGKPLGRKICNESMVLYRTADGQVAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG + +GK MP ++ I+S P E+ G +W+WPGD + P
Sbjct: 62 GVLVCGYHGLKMGCNGKPAGMPGQRVGGFPSIRSFPAVERYGFVWVWPGDA--SEADPAK 119
Query: 333 LPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH------------------ 369
LP + H + + ++ L++DNL+DL H + H
Sbjct: 120 LPALAWAEDPAWAHGGGLYHIRCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPKTTS 179
Query: 370 ------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISK 419
TS F + P + +GL D P+D F PP V+ +G++
Sbjct: 180 HGDEVVTSRFMENVMPPPFWRMALRGNGLA---DDIPVDRWQICRFTPPSHVMIEVGVAH 236
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + P + + M+ +F P + R +
Sbjct: 237 AGHGGYDAPPNKKASSIVVDFITPETDTSIWYFWGMARNFRP---DDPALTAEIREGQGK 293
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ EDL ++ QQ + L + D GV R
Sbjct: 294 IFAEDLEMLERQQRNLEQWPERTLLKLNIDAGGVLSR 330
>gi|332531588|ref|ZP_08407485.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
gi|332038951|gb|EGI75380.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
Length = 362
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 99/241 (41%), Gaps = 39/241 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ A S ++ D + E +R G VQ+ C HR PL LG V +G
Sbjct: 9 KNTWYVAASSQEIGADKPLGRMVCGERIAFYRDAAGKMVAVQDFCPHRGAPLSLGHVCDG 68
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R IKS P E+ G +W+W G+ L
Sbjct: 69 QLTCGYHGLVMGCDGKTVSMPGQRVRGFPAIKSFPVAERYGFVWVWTGE--AALADEAKL 126
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 369
P F H E + + ++ L++DNL+DL H + H
Sbjct: 127 PVLEFFDHPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPCKTTVE 186
Query: 370 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
TS F G P K A+GL D P+D F PP V+ +G++
Sbjct: 187 DDTVVTSRFMSGIEAPPFWKMALRANGLP---DDQPVDRWQICRFSPPSHVMIEVGVALQ 243
Query: 421 G 421
G
Sbjct: 244 G 244
>gi|428777418|ref|YP_007169205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691697|gb|AFZ44991.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 354
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+PVA++ DLK +T+ + + IFR + G + + C H+ H G+VN
Sbjct: 24 NHWYPVAWAHDLKRETVQQVTVWYQNIAIFRDEAGDVHALADACPHKGVAFHKGTVNGNH 83
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPT 326
+ CPYHGWE++++GKC +P +L +S P E+ G+IW++PG +E P
Sbjct: 84 LVCPYHGWEFNSEGKCVHIPYFSEEQKLPRACARSYPTQEKYGLIWVFPGEAELAEEKPI 143
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF- 385
+P P + + + +N +D+ H + H +GW P L+
Sbjct: 144 LNLPEFENPKWLRV--PVTARFNAHFSMCNENTMDVFHG-YLHQDL--QGWFNPELITLK 198
Query: 386 -----------------LTPASGLQGYWD---PYPIDMEFRPPCMVLSTIGIS 418
L GL D PI +E+R P + GIS
Sbjct: 199 ETEDKVCAQYNVSYKGILAKFLGLTDRADEVTTLPITIEYRYPHYATTLEGIS 251
>gi|398385455|ref|ZP_10543476.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
gi|397720406|gb|EJK80963.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
Length = 355
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 38/278 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L + W+ + +L+ + +P V+FR + G +++ C HRA PL G V
Sbjct: 14 LHDIWYVAGWGHELQPGSRTSRTILGQPLVLFRTEGGEVSALEDRCCHRAMPLSEGVVIG 73
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+CPYHG E+ TDG C +P+ R +++ P E++ ++WIW GD
Sbjct: 74 ESIRCPYHGLEFGTDGACVHIPAQDKIPRTARVRHFPLVEKDALLWIWMGDADKADI--A 131
Query: 332 LLPPSGFEIHAEIVMELPIEH-------GLLLDNLLDLAHAPFTHTSTFAKG----WSVP 380
++P + H + H LL+DNL+DL+H P+ H ST + P
Sbjct: 132 IIPDHPY--HQDPAWAWRSAHYDVQGNWQLLVDNLMDLSHLPYIHPSTIGGDPELHFKTP 189
Query: 381 SLVKFL-------------------TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
++ L A+G +G D + ++EF+P + + T G G
Sbjct: 190 TISTRLPNGVRVERKMPSSVPPPTYVAAAGFKGLVDRWQ-EIEFQPVFIRIHT-GACDEG 247
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 459
R + H P + T + M+ +
Sbjct: 248 TGAYDGDRSHGLSMLGFHGITPETETTTHYFWSMATNI 285
>gi|238059738|ref|ZP_04604447.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
gi|237881549|gb|EEP70377.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 37/278 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
++ W+ A+ +++ ++ EP V++R G + + C HR PL ++
Sbjct: 5 RDQWYVAAYGSEVGRG-LLARTVLGEPLVLYRTGAGAAVALADRCVHRRYPLSESRLDGD 63
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT--ATIP 330
I C YHG+ Y G C +P Q R ++ S P EQ+ IW+W GD ATIP
Sbjct: 64 TIVCGYHGFTYDPTGACVFVPGQQRIPRTARVTSYPVVEQDSFIWVWIGDRDRADPATIP 123
Query: 331 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TSTFA 374
L G+ + + L +GLL+DNL+DL+H + H T+
Sbjct: 124 RAPWLADPGYAV-VRGMAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEVD 182
Query: 375 KGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---K 422
+ + + + F ++G+QG + D+E+ PPC+ L I+ G
Sbjct: 183 EDRGIVYVSRHMDDAECPPFYARSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPRGVHPP 241
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
EG+++ A H ++ PS+ T + ++ DFA
Sbjct: 242 AEGEDS--AAFHAEIVYAITPSTEHTTYDFWAVARDFA 277
>gi|390575016|ref|ZP_10255123.1| vanillate monooxygenase [Burkholderia terrae BS001]
gi|389932818|gb|EIM94839.1| vanillate monooxygenase [Burkholderia terrae BS001]
Length = 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 128/317 (40%), Gaps = 49/317 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+S D+ D + + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNTWYAAAWSRDVGAD-LSTRELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I+C YHG ++ G C K P R +++S P ++ G++WIW G+ P+
Sbjct: 63 DGIECGYHGLQFDCSGACSKNPHGDGRIPPGARVRSFPAEDRHGLVWIWAGE--PSRADA 120
Query: 331 CLLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLA-----HAPFTHTSTFAK----- 375
L+P + + M + L++DNL+DL+ HAP+ H F +
Sbjct: 121 SLIPDFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLHAPYQHVDDFLQAKHDV 180
Query: 376 --------------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
G P S FL YW +++ + P L G+
Sbjct: 181 VQDGSALESRRTVAGTRAPQSFRPFLDDPDAPVDYW----LNIRWHAPGCCLLETGVVPV 236
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS----LDFASVLKHVPFMQYLWRHF 476
G+ + T H+ P T+ LY S LD Q + H
Sbjct: 237 GRPREHGLVRIGT-----HIVTPIGAASTQYLYASSRNYRLDDPDADDETARWQQMGFHE 291
Query: 477 AEQVLNEDLRLVLGQQE 493
++ + E ++ +G++E
Sbjct: 292 QDKPMIEGVQTRMGERE 308
>gi|425457635|ref|ZP_18837336.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
gi|389800952|emb|CCI19818.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
Length = 460
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 30/329 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCL--LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + + G I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLMENIIDSSHIPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T + +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIAPGLIYHDLTSEKFGRTLTV 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D L YR W
Sbjct: 316 QAQGGSQNFSQACYLPTKADLLVFEYRNW 344
>gi|295689725|ref|YP_003593418.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter segnis ATCC
21756]
gi|295431628|gb|ADG10800.1| Rieske (2Fe-2S) iron-sulfur domain protein [Caulobacter segnis ATCC
21756]
Length = 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 126/316 (39%), Gaps = 37/316 (11%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 302
VI RG+DG +++ C HR PL LG V +G + C YHG DG+ MP ++
Sbjct: 42 VIHRGRDGQAVALEDFCPHRGAPLSLGFVRDGELVCGYHGLAMGCDGRAASMPGQRVIGF 101
Query: 303 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 358
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 102 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWAESPDWTYGGGLYHIACDYRLMVDN 161
Query: 359 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 392
L+DL H + H TS F +G P + +GL
Sbjct: 162 LMDLTHETYVHATSIGQKEIDEAPVTTKLEGDEVVTSRFMEGIHAPPFWRMALRGAGLPE 221
Query: 393 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 452
D + I F P V+ +G++ G Q + P +
Sbjct: 222 DALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYQAPADKKVSSVVVDFITPETETSHWYF 280
Query: 453 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 512
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 281 WGMARSFA--VSDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAWPDRKLLKLNIDAGG 337
Query: 513 VRYRLWRDALEKGAKQ 528
VR R+ A++K Q
Sbjct: 338 VRSRM---AIDKAIAQ 350
>gi|427729894|ref|YP_007076131.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365813|gb|AFY48534.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 469
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 141/342 (41%), Gaps = 32/342 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPG-CVQNTCAHR 262
+G + P + W+PV + DL F E V++ K+ + C HR
Sbjct: 19 AGGLDPERFDWQEVWYPVHYVEDLDKSQPTRFTLLERDIVLWWDKNEQTWRAFADQCPHR 78
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQE 313
PL G +NE G ++CPYHGW +S GKCE++P T LR + SLP ++
Sbjct: 79 LAPLSEGRINEDGWLECPYHGWAFSGTGKCERIPQQAAGDKAETSLRAC-VNSLPTTVRQ 137
Query: 314 GMIWIWPG--DEPPTATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
G+++++PG + T+P L + + ++P + L++N+LD +H P+T
Sbjct: 138 GLLFVYPGRAENAAQTTVPIVDALEEDADGWVCLNTFRDIPYDALTLMENVLDSSHIPYT 197
Query: 369 HTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
H T +V +L + G +G W+ P R + PG +
Sbjct: 198 HHRTVGNRANVSPVNLEVVESGKWGFKGIWEEGP-----RKGTLGKQDTTFIAPGLMWHD 252
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNED 484
T + + P + + RL R F+S + + + H + + ED
Sbjct: 253 LTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSKIPGLFIKLTPRWYSHIGQNGVLED 312
Query: 485 LRLVLGQQERM----NNGANV---WNLPVGYDKLGVRYRLWR 519
++ L QER AN+ + LP D + WR
Sbjct: 313 DQIFLHYQERYLEQRGGSANLNKAFYLPTKADAFVAQLHSWR 354
>gi|124266197|ref|YP_001020201.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258972|gb|ABM93966.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 353
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 39/272 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A ST++ + + +I+R +DG + + C HR PLHLG
Sbjct: 12 LTNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIG 71
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 329
+ C YH ++ G+C K P + Q+ + K++S P E+ G +WIW G D P A +
Sbjct: 72 DEVACLYHALQFDCTGQCTKNPHGNGQIPKAAKVRSFPLEERYGFLWIWMGEDAPDLARL 131
Query: 330 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 383
P P +G A M + + L++DN++DL+H H +G P +
Sbjct: 132 PDFGELDKGPDTGV---AFTYMHMKANYELIIDNVMDLSHVDHVHGEIITTRGQLSPQIP 188
Query: 384 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISK-PG 421
K + W+ P P I++ + PP + ++G ++ G
Sbjct: 189 KLREGTESVAARWEWQQTPPLLILADFLPEPKTQARHFIEVSWSPPANIQLSVGATQNDG 248
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
L+ N C + LH C P + T +
Sbjct: 249 ALDLVN---CIGQ-YDLHTCTPETANTTHYFF 276
>gi|399002921|ref|ZP_10705597.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
gi|398123837|gb|EJM13371.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM18]
Length = 348
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 135/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G +Q + P + + M+ +F + R
Sbjct: 236 HAGHGGYHAPQQLKASSIVVDFITPETETSIWYFWGMARNFNP---QDEALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLSHPARNLLKLNIDAGGVQSR 330
>gi|329851632|ref|ZP_08266389.1| vanillate O-demethylase oxygenase subunit [Asticcacaulis
biprosthecum C19]
gi|328840478|gb|EGF90050.1| vanillate O-demethylase oxygenase subunit [Asticcacaulis
biprosthecum C19]
Length = 349
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 55/346 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
NT N W+ A S ++ + C E V +R +D +++ C HR PL LG
Sbjct: 2 NTWPMNTWYVAARSDEVAAAPLGRTICGER-MVFYRDQDHRAVALEDFCPHRGAPLSLGK 60
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATI 329
V++G++ C YHG DG+ MP ++R +K+ P E+ G IW+WPGD P
Sbjct: 61 VSDGKLVCGYHGLTMGCDGRAASMPGQRVRGFPPVKAYPAVERYGFIWVWPGD--PAQAD 118
Query: 330 PCLLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTH--------------- 369
P LP + H + + H L++DNL+DL H + H
Sbjct: 119 PATLPNLIWGDHPDWAYGGGLYHIKCNFRLMIDNLMDLTHETYIHADSIGQKEIDEAPVA 178
Query: 370 ---------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIG 416
T + P + +GL D P+D F PP V+ +G
Sbjct: 179 TRLEDDEAITERYMSDIQAPPFWQMALRENGLA---DDVPVDRWQICRFSPPSHVMIEVG 235
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYL 472
++ G + P S + M+ F A + +
Sbjct: 236 VAHAGHGGYNAPDGVKAASIVVDFITPESETSHWYFWGMARRFKPDDAGLTDRI------ 289
Query: 473 WRHFAEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYR 516
R ++ +ED+ ++ QQ+ + N G N+ L + D GV R
Sbjct: 290 -REGQGKIFSEDMEMLERQQDNLTANPGRNLLKLNI--DAGGVHAR 332
>gi|297170934|gb|ADI21951.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [uncultured nuHF2
cluster bacterium HF0130_29D04]
Length = 329
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A S ++ + E V FR G +++ CAHR PL LG V
Sbjct: 6 LQNQWYAAALSKEVPEKEPFARKICGEDIVFFRKPKGEVSALEDRCAHRHAPLSLGLVEN 65
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE--PPTATI 329
G I+C YHG + +G+C ++P + +IKS P EQ+G +WIW G +TI
Sbjct: 66 GSIRCQYHGMLFDGNGQCVEVPGQEKIPSGARIKSYPVAEQDGWVWIWIGKNGSQSVSTI 125
Query: 330 PCL-----LPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P +GF+ H + + L +DNLLDL+H FTH S+
Sbjct: 126 PSFPYFDTAKWAGFQKYFHVQGAAQ------LFVDNLLDLSHLAFTHKSSIG 171
>gi|170721226|ref|YP_001748914.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida W619]
gi|169759229|gb|ACA72545.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida W619]
Length = 355
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 126/315 (40%), Gaps = 43/315 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + + C E+ V +RG + V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEK-IVFYRGNENRVAAVEDFCPHRGAPLSLGFVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKAFAVVERHGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLPWAARDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTTVS 180
Query: 376 GWSV-----------PSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
G V P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMENIMPPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + + P S + M+ +FA+ H + R ++
Sbjct: 238 GHGGYHAPAEHKASSIVVDFITPESDTSIWYFWGMARNFAA---HDQALTASIREGQGKI 294
Query: 481 LNEDLRLVLGQQERM 495
+EDL ++ QQ+ +
Sbjct: 295 FSEDLEMLERQQQNL 309
>gi|390441204|ref|ZP_10229357.1| Rieske 2Fe-2S family protein [Microcystis sp. T1-4]
gi|422301550|ref|ZP_16388917.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa PCC 9806]
gi|389789389|emb|CCI14550.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa PCC 9806]
gi|389835488|emb|CCI33483.1| Rieske 2Fe-2S family protein [Microcystis sp. T1-4]
Length = 349
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P ++ I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTISAFGKLTP---KVAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|86747254|ref|YP_483750.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86570282|gb|ABD04839.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 355
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 33/258 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+P+ +S D+ + V++R + G P + + C HR PL +G +
Sbjct: 12 RNNWYPLTWSRDVTR-ALGCHRILGIDLVVYRSEAGEPIALDDVCPHRLAPLSIGKLKGD 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
I+C YHG ++ DG+C ++P + N ++ S P E+ G++WIWPGD P P L
Sbjct: 71 AIECGYHGMTFARDGRCIRIPGQPIIPPNARVPSYPLHEKMGLVWIWPGD--PALADPAL 128
Query: 333 L-------PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 385
+ P H + + + + L DNL D AH F H ST S V+
Sbjct: 129 IYDLPQYGQPDWHAAHGD-ALRIGTNYLNLADNLCDPAHVSFVHLSTLGNAASEEIPVEH 187
Query: 386 LTPASGLQGY-W--DPYPIDM-----------------EFRPPCMVLSTIGISKPGKLEG 425
A G+ + W D PI + ++R P + + G ++ G +
Sbjct: 188 TVNARGVLVWRWINDAPPIPLFAKYGSFTGHVDRWHYYDYRAPSIAVIDFGSAEAGAIAD 247
Query: 426 QNTRQCATHLHQLHVCLP 443
R + H P
Sbjct: 248 PEQRDAGLRIFACHFITP 265
>gi|307153793|ref|YP_003889177.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984021|gb|ADN15902.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 355
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 204 SGPVQPYNTRLK------NFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCV 255
S P+ P NT ++ N W+ VA S ++K +P+ + + V++R + GI +
Sbjct: 5 SSPIIPENTDVRTCPINPNHWYAVARSCEVKR---LPYSIILWHQAIVLYRDQKGIIHAL 61
Query: 256 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFE 311
++ C HR L GSV+ ++C YHGW ++ +GKC +P +L + +I+S P E
Sbjct: 62 EDRCPHRQVKLSHGSVSGNDLECAYHGWRFNREGKCTFVPYLAEHQKLPSCQIRSYPVLE 121
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPSGF-------EIHAEIVMELPIEHGLLLDNLLDLAH 364
+G IW++PGDE A L P G I V+ P + L++NL+D+ H
Sbjct: 122 LDGFIWLFPGDE--QALKQKSLQPMGVPEWDHLNYIATVSVINCPGHYSFLIENLMDMYH 179
Query: 365 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDP---YPID 402
H + W+ L + + Y++ Y ID
Sbjct: 180 G---HLHNNYQAWAAAKLQNLSVEQNRIDAYYEAQSYYRID 217
>gi|148239148|ref|YP_001224535.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
gi|147847687|emb|CAK23238.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
Length = 440
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 130/319 (40%), Gaps = 56/319 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVN-EGR 275
W+PVA+ DL F E V++ G + C HR PL G +N G
Sbjct: 9 WWPVAYLRDLDPKRPQRFTVLERDLVLWWDASIGSWRAFDDVCPHRLVPLSEGRINASGE 68
Query: 276 IQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT--- 326
++CPYHGW + +G+C ++P + R SLP +G++++W GD PT
Sbjct: 69 LECPYHGWSFDGEGRCTRIPQMAEGANASGRRSSCNSLPTCSGQGLLFVWTGD--PTMAG 126
Query: 327 ATIPCLLP-----PSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
A P L+P G+ I + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 AKDPPLVPLLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKTVGNREN 186
Query: 379 VPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL- 435
++ + SG + +W+ P + G+L Q T A L
Sbjct: 187 AAPVLAVIRAENDSGFEAFWEEGP------------------RRGRLGSQFTHFSAPQLM 228
Query: 436 -HQLHV-----------CLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVL 481
H L +P R + RL R F S L V +H +
Sbjct: 229 WHDLDAKGFARILTVVYAVPIRRGECRLFARFPFQFKSALPRLLVGLRPRWLQHIGNHKV 288
Query: 482 NEDLRLVLGQQERMNNGAN 500
ED ++ L QER+ A
Sbjct: 289 LEDDQVFLHWQERVLESAG 307
>gi|398994825|ref|ZP_10697720.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398131654|gb|EJM20968.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 352
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V+N C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIASKPLGRQICGEKI-VFYRGHEGRVAAVENFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQ--GKADPDLI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ +QG +W D P+D F PP VL +G++
Sbjct: 176 VTTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTDTIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQE + L + D GV+ R
Sbjct: 293 KIFSEDLDMLEQQQENLLANPERNLLKLNIDAGGVQSR 330
>gi|83746974|ref|ZP_00944020.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|207738780|ref|YP_002257173.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
gi|83726394|gb|EAP73526.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|206592148|emb|CAQ59054.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
Length = 342
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++ D + C E V +RG +G +++ C HR PL LG V +
Sbjct: 3 LKNAWYVACTPDEIADKPLGRRICGER-MVFYRGPEGKMAALEDFCPHRGAPLSLGFVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEP---PTATI 329
G + C YHG DGKC MP ++ I+ P E+ G IW+WPGD P
Sbjct: 62 GHLVCGYHGLTMKADGKCASMPGQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 330 PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
S + + + ++ L++DNL+DL H + H ++ +
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQ 167
>gi|407713704|ref|YP_006834269.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235888|gb|AFT86087.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 347
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 116/274 (42%), Gaps = 42/274 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ + DL D ++ +E +++R ++G+ + N C HR PL G
Sbjct: 4 LRNTWYCAGWGADLGQDDLIDRTILKESVLLYRKQNGLAVAIGNRCPHRFAPLSSGCKKG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT-- 328
+ CPYHG + G+C P T + ++ P E+ +WIW GD P A
Sbjct: 64 DNVACPYHGLTFGPSGECVLNPHGDGTTPKAARVTRYPLVERYDALWIWMGD-PELADAD 122
Query: 329 -IPCLLPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 376
IP S E H +E+P+ + LL DNLLDL+H P+ H A+G
Sbjct: 123 EIPDFSESSLREGWGHIRGHLEVPVHYELLTDNLLDLSHVPYLHPFLSAQGPQPDGFREE 182
Query: 377 ----------WSVP-SLVKFLTPASGLQGYWDPYP------IDMEFRPPCMVLSTIGISK 419
WS+ +L TP L W+ P DM + P +L GIS
Sbjct: 183 RELKQDGNTVWSMHRNLNTVTTPLFRL--LWEDAPEVIEGYFDMRWTAPSNLLLRAGIS- 239
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
++G+ R+ + H+ P++ T +
Sbjct: 240 --AMDGR--REDGARIPMAHLLTPATETHTHYFW 269
>gi|409407770|ref|ZP_11256221.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum sp. GW103]
gi|386433521|gb|EIJ46347.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum sp. GW103]
Length = 349
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D + + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIESKPLGRQICGEKIVFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--ATIPC 331
++ C YHG E DG MP ++R I+S P E+ G IW+WPG++ A I
Sbjct: 63 QLVCGYHGLEMGCDGHTRSMPGQRVRGFPCIRSFPVVERYGFIWVWPGEKEQADPAQIHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
L E + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWAENPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVEGE 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
TS F + P + +GL D P+D F PP V+ +G++ G+
Sbjct: 183 RVITSRFMENIMPPPFWRMALRGNGLA---DDVPVDRWQICRFSPPSHVMIEVGVAHAGQ 239
>gi|349574249|ref|ZP_08886206.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
gi|348014197|gb|EGY53084.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
Length = 365
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 19/337 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N+W+ A D++ F+ +V+F +G +++ C HR PL G V
Sbjct: 32 LHNYWYIAATERDVRRKPQC-LTLFDRHYVVFHAGNGRFAAMEDRCPHRNAPLSAGKVCN 90
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS---TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
G+I+CPYHGW+++ DG+ ++P+ L ++I ++ C Q+G +W+ PG+ A +P
Sbjct: 91 GQIRCPYHGWQFAADGRLARIPALDGQALPAIRIPTVHCTAQDGYVWLCPGNPATPAPLP 150
Query: 331 C-LLPPSGF-EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
L +G+ P+ L+N LD HA + H S F P
Sbjct: 151 FPHLNEAGWTSFRMRTRFAAPVAQ--CLENFLDCPHAVYVHDSWFRSATGKPVRATLRHL 208
Query: 389 ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC------ATHLHQLHVCL 442
A G + ++ P + + + S + + T + H C
Sbjct: 209 ADGAEVEYENEPREQSWVWRLLQNSGTDMRHTDRFIAPATSRVDYRFSDRKHYIITSSCT 268
Query: 443 PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNN-GANV 501
P +T + +S + + P ++ ++ + ++ +D+ ++ Q++ + G
Sbjct: 269 PIGENETEVHTVISFRYGRL---GPLVRLVFEPLSRLIIGQDVAIMQRQRDNIRRFGGRE 325
Query: 502 WNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
D L + WR AL +G ++ P QTR
Sbjct: 326 RFYTSEADLLLPAIQAWRQALAEG-REPPAAGTEQTR 361
>gi|87124080|ref|ZP_01079930.1| cell death suppressor protein [Synechococcus sp. RS9917]
gi|86168649|gb|EAQ69906.1| cell death suppressor protein [Synechococcus sp. RS9917]
Length = 439
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLGSVN-EGR 275
W+PVA+ DL F E V++ ++ G + C HR PL G +N EG+
Sbjct: 9 WWPVAYLCDLDRGRPSRFTLLERDLVLWWDREAGQWRAFDDVCPHRLVPLSEGRINAEGQ 68
Query: 276 IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
++CPYHGW + G C ++P + R +SLP +G++++W GD P +
Sbjct: 69 LECPYHGWSFDGSGHCRRIPQMTEEARPEGRRSSCRSLPTASAQGLLFVWSGD--PASAD 126
Query: 330 PCLLP------------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
P LP G+ + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 127 PAALPLVPVLQEQGEGWADGWVVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGRRD 185
Query: 378 SVPSLVKFLT--PASGLQGYWDPYP 400
+ + +T +G + +W P
Sbjct: 186 NAAPVQAEITREDGTGFEAFWQEGP 210
>gi|425444769|ref|ZP_18824812.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
gi|389735432|emb|CCI01073.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
Length = 460
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 136/329 (41%), Gaps = 30/329 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+ + DL F EE VI+ K+ V ++ C HR PL G +NE
Sbjct: 21 RQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRLAPLSEGRLNE 80
Query: 274 -GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGD--E 323
G ++CPYHGW +S G CE +P + R ++S P ++G+++++ G+
Sbjct: 81 SGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGLLFVYAGNPEN 140
Query: 324 PPTATIPCL--LPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P IP + + G I + +LP L++N++D +H P+TH T + +
Sbjct: 141 APLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLIENIIDSSHIPYTHHLTIGNRANAA 200
Query: 380 PSLVKFL-TPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
P ++ + + G +G W P R + PG + T + +
Sbjct: 201 PMELEIIESNRQGFKGIWPEGP-----RKGQLGQQYSNFIVPGLIYHDLTSEKFGRTLTV 255
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQERM- 495
P + + RL R F S L + + H + + ED ++ L QER
Sbjct: 256 VYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILEDDQIFLYYQERYL 315
Query: 496 ------NNGANVWNLPVGYDKLGVRYRLW 518
N + LP D L YR W
Sbjct: 316 QAQGGSQNFSQACYLPTKADLLVFEYRNW 344
>gi|434384793|ref|YP_007095404.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428015783|gb|AFY91877.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 333
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ FW+PV + DL PF + V++ +G P ++ C HR+ L LG V
Sbjct: 9 FRKFWYPVIPTADLLGSPQ-PFTLLGQKIVLWLDAEGKPAAAKDRCCHRSAQLSLGKVVN 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGDEPPTA 327
G I CPYHGW++ + G+C +P QL++V +I++ C E+ G W+ + P A
Sbjct: 68 GAIACPYHGWQFDSSGRCVCVP--QLKDVGIPAAARIETYRCTEKYGYAWVCLDE--PIA 123
Query: 328 TIPCLLPP--SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVK 384
IP + S F + E +++N LDLAH F HT+TF ++ P ++
Sbjct: 124 EIPHIAEAFESDFRLIPEFYETWKCAGLRVMENELDLAHPTFVHTTTFGSEDHPTPDRLE 183
Query: 385 FLTPASGLQGY 395
SGL+ +
Sbjct: 184 ITETPSGLRAH 194
>gi|152995325|ref|YP_001340160.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150836249|gb|ABR70225.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 367
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 145/355 (40%), Gaps = 49/355 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ A S ++ + E +R D V + C HR L LG V +G
Sbjct: 8 KNMWYVAAMSEEVAGSKPLGRKICGESIAFYRSHDNEIAAVLDFCPHRGAALSLGYVEDG 67
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG + DGK ++MP +++ +KS E+ G IW+WPGD+ + L+
Sbjct: 68 LLVCGYHGLKMGADGKTKEMPLQRVKGFPCMKSYAVEERYGFIWVWPGDQ--SQADKDLI 125
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 384
P + ++ E + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 126 PHLEWAVNPEWAYGGGLYHINCDYRLMVDNLMDLTHETYVHASSIGQKEIDESPVSTKVE 185
Query: 385 -----------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK- 422
F A G D P+D F PP V+ +G++ G
Sbjct: 186 GDKVITSRFMENIMAPPFWRSALRGNGLADDVPVDRWQICRFSPPSHVMIDVGVAHAGHG 245
Query: 423 -LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE--- 478
E ++ ++ + + P + + M+ +F P Q L E
Sbjct: 246 GFEAPADKKASSTV--VDFITPETETSIWYFWGMARNFK------PEDQELTDTIREGQG 297
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQLP 530
++ EDL ++ QQE + + L + D GV+ R D A E+ AKQ P
Sbjct: 298 KIFAEDLEVLERQQENLLAFPDYDLLKLDIDAGGVQSRRVIDRIIAKEQAAKQQP 352
>gi|425458836|ref|ZP_18838322.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9808]
gi|389823864|emb|CCI27654.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9808]
Length = 349
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|375093382|ref|ZP_09739647.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
gi|374654115|gb|EHR48948.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora marina XMU15]
Length = 354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 45/286 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T +N W+ A+S ++ + + P EP V +R + G + + C HR PL
Sbjct: 2 TTFARNQWYVAAYSREIGRE-LFPRTILGEPIVFYRTEAGEAVALADRCVHRRYPLSESR 60
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDE----- 323
++ +I C YHG+ Y G C +P T++ R ++ S P EQ+ +W+W GD
Sbjct: 61 LDGDKIVCGYHGFTYDKAGSCVFVPGQTRIPRTARVPSYPLVEQDSFVWVWIGDHDKADP 120
Query: 324 -----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF----- 373
P + P SG E L + LL+DNL+DL+H + H
Sbjct: 121 ALIPRAPWLSDPAYTTVSGME-------PLAARYDLLVDNLMDLSHETYLHGGYIGTPEV 173
Query: 374 ------------------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTI 415
++ + F ++G++G + D+E+ PPC+ L
Sbjct: 174 ANTPISTEVDEEKEVIYVSRHMADAECPSFYAKSTGIEGRITRWQ-DIEYHPPCLYLLHS 232
Query: 416 GISKPGKLEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
++ G L + T A H+ ++ P + T + ++ DFA
Sbjct: 233 RVAPVGVLPADDGTDPDAFHVEVVYAITPETEHSTHDFWAVARDFA 278
>gi|330808946|ref|YP_004353408.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377054|gb|AEA68404.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 357
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
+ L N W+ ++ +L M+ E+P V FR G + + C HR PLH+G +
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKI 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
+QCPYHG + G+C P + + +++ E+ G IW+WPGD P
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGDGSIPKAACVRAFAVAERHGAIWVWPGD--PNLA 119
Query: 329 IPCLLPPSGFEIHAEIVME----LPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 376
L+P F A + LP + LL DN++DL+H F H T G
Sbjct: 120 NDALIPDFSFFEQAPTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDTLGGG 173
>gi|229086002|ref|ZP_04218224.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
gi|228697313|gb|EEL50076.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
Length = 324
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 25/285 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ V FS D+ D + + V+FR ++ V C HR L LGS+ +GR+
Sbjct: 18 WYAVCFSKDVIDKP-IKRKIVGKDLVLFRNENHNIQAVHAYCPHRGADLSLGSIRKGRVT 76
Query: 278 CPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
C YHGWE+ G C +PS + + KS P E+ G+IW++P E +P L
Sbjct: 77 CAYHGWEFDGGGTCVCIPSQPSKQIPKFAHTKSYPVMEKAGLIWVYPECEISKEELPILE 136
Query: 334 PPSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPA 389
E + + + +++++LD+ H F H +T KG S P L +
Sbjct: 137 IFEEVEDINFVFSPYQAKWNAHFTRVVESVLDVVHLSFVHKNTIGKG-SNPELEEL---- 191
Query: 390 SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 449
++G D + + C + KP LEG+N + P ++T
Sbjct: 192 -QIEGDLDSFSLKNGEAYLCYKFPQQWLLKP--LEGKNKK-----FINFVTFTPVDEEET 243
Query: 450 RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQER 494
+ +FA K +P + ++ ++ +VL ED +V Q R
Sbjct: 244 LIFGLAGRNFA---KKMPLLHTIFSRYSLKVLKEDQLVVESQHPR 285
>gi|433455970|ref|ZP_20414034.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
gi|432196878|gb|ELK53298.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
Length = 364
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 146/351 (41%), Gaps = 53/351 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG-SVNEG 274
N W+ A+ ++ M P ++R +DG + + C HR PL +G ++ +
Sbjct: 20 NAWYVAAWDHEVTRKPM-SRRIANRPVALYRTEDGKAVALADACWHRLAPLSMGKTIGKD 78
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
IQCPYHG Y++ G+C MP+ + N + S P E+ +W+W GD PT P L
Sbjct: 79 GIQCPYHGIVYNSAGRCVSMPAQETINPSATVPSFPVVERYRYVWVWLGD--PTMADPDL 136
Query: 333 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 375
+P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 137 VPDMHQMTSPEWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHSSSIGQEELSES 190
Query: 376 -------GWSVPS---LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 416
G +V ++ P L+ D +P +D + F P + +G
Sbjct: 191 DFVVSHDGNTVTVTRWMLNIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTIRIDVG 250
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
++K G + R + + ++ P + + + ++ L+ L R+
Sbjct: 251 VAKAGTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYR--LESQLITTQL-RNG 307
Query: 477 AEQVLNEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
V ED ++ QQE + N +NL + + VR + R + +G
Sbjct: 308 VHGVFGEDEAMLKAQQEAIDANPDYEFYNLNIDGGGMWVRRLIERMLVAEG 358
>gi|167645029|ref|YP_001682692.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. K31]
gi|167347459|gb|ABZ70194.1| Rieske (2Fe-2S) domain protein [Caulobacter sp. K31]
Length = 387
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 45/189 (23%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--- 272
+ W+ A S DLK M + EP +I R + G +++ C HRA L G V+
Sbjct: 35 DTWYMAALSPDLKPGKMEGREFLGEPVLIGRTRAGAVYALRDVCPHRAAKLSAGKVHAEA 94
Query: 273 --------EGR---IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGM 315
GR ++CPYHGW + TDG C K+PS + V++K+ P E +G+
Sbjct: 95 PNGENRGENGRRETVECPYHGWRFHTDGACAKIPSLTAADPLDVSKVRVKTYPLVESQGL 154
Query: 316 IWIW----------PGDEPPT-----ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLL 360
+WIW P + PPT P L+ ++IH I+H +L L+
Sbjct: 155 VWIWMSADPRFDGQPSEPPPTIPGVVGGKPKLVDHLDYDIH--------IDHAVL--GLI 204
Query: 361 DLAHAPFTH 369
D AH PF H
Sbjct: 205 DPAHGPFVH 213
>gi|325272616|ref|ZP_08138975.1| Rieske (2Fe-2S) iron-sulfur domain [Pseudomonas sp. TJI-51]
gi|324102258|gb|EGB99745.1| Rieske (2Fe-2S) iron-sulfur domain [Pseudomonas sp. TJI-51]
Length = 357
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 7/169 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A T+L + + E V++R DG P +++ C HR PL LG
Sbjct: 3 MRNAWYVAASETELGEQ-LFAVKLLNEAVVLYRKGDGTPVALEDACPHRKLPLSLGRRQG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIP 330
I+C YHG + G C + P ++ + K++S P + G+IWIW GD E A+
Sbjct: 62 DDIECGYHGLTFDCSGSCVRAPGSKHVPQGAKVRSYPLAVRYGLIWIWMGDAELADASKI 121
Query: 331 CLLPPSG---FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
C +P G + ++ M +P + + DNLLD +H + H S+F
Sbjct: 122 CHVPEWGDPAWGLNRGDSMVIPCNYLYMTDNLLDPSHVAWVHQSSFGSA 170
>gi|154249242|ref|YP_001410067.1| Rieske (2Fe-2S) domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153178|gb|ABS60410.1| Rieske (2Fe-2S) domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 324
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 19/176 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
+KN W+ V S ++K ++ F E ++R + G C+ + C HR + G +
Sbjct: 2 IKNQWYIVLSSKEVKKGELIGVTRFGEKLALWRDEAGKVHCISDVCCHRGASISHGKILS 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
N R+ CP+HG+EY + G+ +P+ N K+K+ +E IWIW GD PT
Sbjct: 62 NGERVMCPFHGFEYDSTGRVCVIPANGRNTPVNENFKVKAYHTYELADFIWIWYGDGEPT 121
Query: 327 ATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP+ FE ++E + + ++N LD+ H PF H +T +G
Sbjct: 122 N------PPTYFEDITDDLSYSEFKEVWNVHYSRAIENQLDVVHVPFVHYNTIGRG 171
>gi|425469857|ref|ZP_18848759.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9701]
gi|389880265|emb|CCI38966.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9701]
Length = 349
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRHLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPVK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|427720788|ref|YP_007068782.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427353224|gb|AFY35948.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 443
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 59/345 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+PV+ DL P VI++ K V + C HR PL G +++ G
Sbjct: 11 WYPVSPIEDLDSQRPNPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSEGRIDDKTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEP-- 324
+ C YHGW++ G C +P + +N+ +LP ++ ++W+WP +
Sbjct: 71 NLMCTYHGWQFDAQGICTHIPQAENPQLVTKNQQNLCAVTLPTRQENDLLWVWPDAKSVE 130
Query: 325 PTATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS-------- 371
A P L P GF + V +L + L++N+ D +H PF H
Sbjct: 131 QAAITPLPLSPQIDANKGF-VWNSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRDKA 189
Query: 372 ---TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
+ + S SL++ T + + + F PPC + I I K G T
Sbjct: 190 RPISLSIEESTASLIEVSTAGN--------FSTKITFEPPCRLEYAINIGNSDKKMGLVT 241
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLR 486
C+P S K+R++ + +FA L F+ W H + VL+ D+
Sbjct: 242 -----------YCIPVSPGKSRIVAQFPRNFAQTLHR--FIPRWWDHITNRNLVLDGDMI 288
Query: 487 LV------LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
L+ L Q++ + + LP D+L + +R W D +G
Sbjct: 289 LLSQQEYFLQQRQLTESWKTAYKLPTSADRLVIEFRNWFDKYCQG 333
>gi|423696631|ref|ZP_17671121.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003531|gb|EIK64858.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 357
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 11/174 (6%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
+ L N W+ ++ +L M+ E+P V FR G + + C HR PLH+G +
Sbjct: 2 SYLLNTWYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKI 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
+QCPYHG + G+C P + + +++ E+ G IW+WPGD P
Sbjct: 62 VGDSVQCPYHGLRFDGSGQCTHNPHGDGSIPKAACVRAFAVAERHGAIWVWPGD--PNLA 119
Query: 329 IPCLLPPSGFEIHAEIVME----LPI--EHGLLLDNLLDLAHAPFTHTSTFAKG 376
L+P F A + LP + LL DN++DL+H F H T G
Sbjct: 120 NDALIPDFSFFEQAPTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDTLGGG 173
>gi|148557169|ref|YP_001264751.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502359|gb|ABQ70613.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 350
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 38/315 (12%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A++ +++D T++ F P V+ R DG + C HR PL LG + R
Sbjct: 9 NCWYMAAWADEVRD-TLLARRLFGRPIVMARFHDGAAVAFDDRCPHRFAPLSLGRLKGDR 67
Query: 276 IQCPYHGWEYSTDGKC---EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDE--PPTATIP 330
I+C YHG ++ G C + ++ P E+ ++WIWPGD TIP
Sbjct: 68 IECGYHGLQFGRSGACIANPGGGGHFPPGTRTRAYPLVERHRILWIWPGDPALADEGTIP 127
Query: 331 --CLLPPSGFEIHAEIVMELPIEHGLLL--DNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
L+PP+G H I L ++ LL DN++DL H F H + + VK
Sbjct: 128 DLALIPPAGG--HDNIGNYLHVKANWLLETDNIMDLTHVGFLHDGSLGNATMRAAEVKVS 185
Query: 387 TPASGLQGY-WDPYPI----DMEFRP-----------PCMVLSTIGISKPGKLEGQNTRQ 430
++ W P + M+ +P P +++ G PG Q+
Sbjct: 186 EQDGTIRAVLWMPDTLCGFGPMQGQPCDQWNNVVWMAPSIMMMDFGAVPPGAEPIQDKGA 245
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV-LNEDLRLVL 489
A H+ P + + T + S + +P M R +V L ED +V
Sbjct: 246 YA-----FHIFTPETEQSTHYFFGSSGSYGDDEAWIPAMV---REAQSRVFLAEDNPMVE 297
Query: 490 GQQERMNNGANVWNL 504
G +RM G + W+L
Sbjct: 298 GVADRM-GGEDFWSL 311
>gi|428223044|ref|YP_007107214.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427996384|gb|AFY75079.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 331
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 15/173 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKNFW+ + S +L+ + VI+R + P + N C HR L G V +
Sbjct: 2 LKNFWYAICLSKELESKP-IGITALGSDLVIYRNSNNEPIVMSNLCVHRGASLSSGWVKQ 60
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV------KIKSLPCFEQEGMIWIWPGD----- 322
I CPYHGWEY +DG C K+PS + NV ++ + P E+ G+IW + GD
Sbjct: 61 DCIVCPYHGWEYKSDGSCIKIPSYK-ENVPIPNKARVLTYPTQEKYGLIWAFIGDISESE 119
Query: 323 EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
PP P ++ + + + + ++N +D+AHAPF H +F
Sbjct: 120 RPPIPIFSEYDDPKYKKLWGDYSWD--VNYTRAVENGIDIAHAPFVHAGSFGN 170
>gi|428772546|ref|YP_007164334.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
gi|428686825|gb|AFZ46685.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
Length = 465
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 49/315 (15%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLG 269
N + W+PV F DL+ + F EE VI+ K + C HR PL G
Sbjct: 24 NFNYQEVWYPVFFVEDLEKNRPNSFTLLEEDIVIWWEEKTSQWRVFTDKCPHRLAPLTEG 83
Query: 270 SVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGMIWIWPG 321
+NE G ++CPYHGW +S +G CE +P Q +++ PC ++ +++++ G
Sbjct: 84 RINEEGLLECPYHGWAFSGEGDCEVIPQQQENQRAHTSSRACVRAYPCKVEQDLLFVYAG 143
Query: 322 -----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
D+ P + L + ++P LL+N+LD +H P+TH +
Sbjct: 144 NPDNADKTPIPIVGPLEEDKDKWLVLNTFRDIPYSALTLLENVLDSSHIPYTHHGSVGDR 203
Query: 377 WSVPSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+V ++ + ++ G G W P + GKL Q T A +
Sbjct: 204 TNVSTVELEIISSNRQGFNGVWQEGP------------------RKGKLGSQYTTFVAPN 245
Query: 435 L--HQLH-----------VCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQ 479
L H L P S+ K RL R F+S + + + H +
Sbjct: 246 LMWHDLTSKQFGRTMTVVYATPISKGKCRLFARFPFQFSSKIPQFFIKLTPRWYSHLNQN 305
Query: 480 VLNEDLRLVLGQQER 494
+ ED ++ L QER
Sbjct: 306 AILEDDQIFLHYQER 320
>gi|115391876|dbj|BAF33363.1| alpha-subunit oxygenase [Streptomyces sp. NL15-2K]
Length = 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 155/361 (42%), Gaps = 53/361 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + ++ EP V +R + DG P + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LLGRTILGEPLVFYRTEEDGTPVVLHDRCVHRRFPLSEAPTRL 67
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P
Sbjct: 68 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD--PALAD 125
Query: 330 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 369
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 PQTIPRAKHLDSPGWTTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET 182
Query: 370 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
T+ +G + + + F ++G+QG + D+E+ PC+ L I+
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAACPPFYAKSTGIQGRITRWQ-DIEYHAPCLYLLHSRIA 241
Query: 419 KPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
G + E + H + PS+ K + +S D+A+ V ++L +
Sbjct: 242 PVGVVPEPDGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWATDDAEV--TEFLRGNNH 299
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRY-RLWRDALEKGAKQLPFMKPMQ 536
V+ + L L Q+ L + D G+ R+ +E+GA KPM+
Sbjct: 300 TVVMQDVDALNLLQKTLGTERTGYQELSINIDTGGLAARRILARLVEEGA------KPME 353
Query: 537 T 537
T
Sbjct: 354 T 354
>gi|8346964|emb|CAB93956.1| a-subunit oxygenase [Pseudomonas fluorescens]
Length = 353
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 132/341 (38%), Gaps = 52/341 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L+ + P + V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGQALGPARSAAKRMVFYRAHEGRVAAVEDFCPHRGAPLSLGYVENG 63
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 64 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 121
Query: 334 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 122 HHLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 176
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ + G +W D P+D F PP VL +G++
Sbjct: 177 QTTVDGDQVVTARHMHNVMPPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVLIEVGVA 236
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G + Q + P S + M+ +F P Q L E
Sbjct: 237 HAGHGGYDASAQYKASSIVVDFITPESDTSIWYFWGMARNFN------PQDQALTESIRE 290
Query: 479 ---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 291 GQGKIFSEDLEMLERQQQNLLAQPQRSLLKLNIDAGGVQSR 331
>gi|325048236|emb|CBW54656.1| putative methylase [Streptomyces sp. JS360]
Length = 358
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 115/272 (42%), Gaps = 35/272 (12%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+S ++ + C ++P V++R DG + + CAHRA PL G
Sbjct: 5 NTWYVAAWSAEVTAKPVRRVIC-KQPIVLYRTPDGGAVALADRCAHRAYPLSEGRTVGDS 63
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG-----DEPPTAT 328
I+C YHG+ Y DG C ++P+ +++S P E++G IW+W G DE
Sbjct: 64 IECGYHGFAYGPDGACTRVPAQSAIPARARVRSYPVVEKDGWIWVWTGERELADESLVPD 123
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------FAKGWSVPSL 382
+ P+ + ++ E H L+ DNLLDL H F H +T + G +V
Sbjct: 124 THWMDDPAWATVTHTVLFEC--RHDLIHDNLLDLTHESFLHRTTVGDDYIYEHGITVEVD 181
Query: 383 VKFLTPASGLQGYWDP--YPIDM------------EFRPPCMVLSTIGISKPGKLEGQNT 428
+ +T + G P Y M EF P + GI+ G+
Sbjct: 182 GRVVTADRLMPGVQAPPLYARTMAAEGLYDRFHATEFHVPSYHVLHSGITGQGR-----P 236
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
R+ + L+ P K T Y S +FA
Sbjct: 237 REEGYLIKVLNGITPVDEKTTWYYYAFSRNFA 268
>gi|254489200|ref|ZP_05102404.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
gi|214042208|gb|EEB82847.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
Length = 355
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 9/179 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ +STD DD +VP + V+FR DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDD-LVPLTLLAQNIVVFRCSDGQLAALEDRCPHRLLPLSKGKRIG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
IQC YHG + G+C ++P S + + S P E+ G+++IW GD T
Sbjct: 63 DTIQCGYHGMTFDAGGQCVRVPGQSNLPTSAYVDSFPVLERHGIVFIWMGDAEKADTALA 122
Query: 332 L----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 384
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 123 FDMPELSEDGWHLHHGDKLHIKANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVK 181
>gi|219130881|ref|XP_002185582.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217402990|gb|EEC42947.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 498
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 50/346 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--EGR 275
W P+A +L D P + +V ++ DG + C HR PL G V+ + R
Sbjct: 61 WVPLASVYELHPDRPTPLRFLGQSYVTYQSNDGQWAVFDDACPHRLAPLSEGRVDRQKNR 120
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK---------IKSLPCFEQEGMIWIWP-GDEPP 325
++C YHGWE+ DG+C+++P ++ +KS P ++ ++++WP DE P
Sbjct: 121 LECSYHGWEFDADGRCQEIPQADFSTMQKAMQNERCHVKSYPVHVEKNILFVWPWADEDP 180
Query: 326 TATI--PCLLPPSGFEIHAE----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW-S 378
T+ P P E +E +LP LL+N++D +H PF H K +
Sbjct: 181 LITVSQPHCAPEHFMEGVSENCTTYTRDLPYGWDTLLENIVDPSHVPFAHHGLQGKREDA 240
Query: 379 VPSLVKFLTPA----SGLQGYWDPYPIDME------FRPPCMVLSTIGISKPGKLEGQNT 428
+P + +P+ G ++ + M FR P ++ P K E Q
Sbjct: 241 IP--INMTSPSDLSPEGFVFQFEDRTMSMRRQGGAVFRAPFVIHYKADFETPSK-EKQKK 297
Query: 429 RQCATHLHQL-HVCLPSSRKKTRLLY------------RMSLDFASVLKHVPFMQYLWRH 475
R + + L + LP+ +R++ A + + +P +L
Sbjct: 298 RANSPKVFNLTAIMLPTKPGWSRIILMGAPRTKQIEKKEKERLVAKIFRKLP--SWLVHT 355
Query: 476 FAEQVLNEDLRLV-LGQQERMNNG--ANVWNLPVGYDKLGVRYRLW 518
F+ + L+ DL + +QER G A + +P D+ R W
Sbjct: 356 FSNRFLDSDLAFLHFQEQERERRGVDARAYFMPAQSDRCVSALRKW 401
>gi|167647208|ref|YP_001684871.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167349638|gb|ABZ72373.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 347
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 40/318 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++ W+ AF+ ++ D + + P V++R G + + C HR PL +G++ +
Sbjct: 6 LQDAWYQAAFAREIGDKPLA-RTLLDVPIVLYRSA-GKVVALHDRCPHRFAPLSMGALRD 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G+I C YHG + DG+C P L R +++++ P E+ ++WIW GD P L
Sbjct: 64 GQIICGYHGVGFGDDGRCVHNPHGALPRAMRVRAYPVVERHTVVWIWMGDT--RKADPAL 121
Query: 333 LPPSGFEIH----AEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
+P F A I +P + L++DNL+DL+HA + H ++ G +
Sbjct: 122 IPDLSFIDETPETARICFYIPTAANYRLVVDNLMDLSHADYLHPTSLG-GVMTGAEASTE 180
Query: 387 TPASGLQGYWD--------------PYP------IDMEFRPPCMVLSTIGISKPGKLEGQ 426
A G+ W P P + +R P +++ ++ G+
Sbjct: 181 LAADGVVNTWINRNCLAPARFHARVPPPQRADAWTEATWRAPAIMVIGTALAPAGE---- 236
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 486
R+ + LH P + T Y + L V + + L A +NED
Sbjct: 237 -PRRREDEIWALHSMTPETASTTH--YFVCGTRGERLDDVEYSERLRGMLANAFINEDKP 293
Query: 487 LVLGQQERMNNGANVWNL 504
++ QQ RM GA++ +L
Sbjct: 294 MLEAQQARM-GGASLSSL 310
>gi|425447660|ref|ZP_18827645.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9443]
gi|389731719|emb|CCI04257.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9443]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|425433924|ref|ZP_18814397.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9432]
gi|389679212|emb|CCH91981.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9432]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTISDFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|440754141|ref|ZP_20933343.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|443657111|ref|ZP_21131830.1| rieske [Microcystis aeruginosa DIANCHI905]
gi|159029863|emb|CAO90917.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|440174347|gb|ELP53716.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|443333240|gb|ELS47808.1| rieske [Microcystis aeruginosa DIANCHI905]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|425441227|ref|ZP_18821508.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9717]
gi|389718122|emb|CCH97874.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9717]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINQENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|227015885|gb|ACP17982.1| putative vanillate-O-demethylase oxidoreductase a-subunit
[Pseudomonas nitroreducens]
Length = 354
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIADKPLGRQICNEKIVFYRGAEGRVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E +GK MP +++ IKS E+ G IW+WPGD P L+
Sbjct: 63 KLICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 384
+ + E + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 121 HHLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVE 180
Query: 385 -----------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
F A G D P+D F PP VL +G++ GK
Sbjct: 181 GDTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239
>gi|56752068|ref|YP_172769.1| hypothetical protein syc2059_d [Synechococcus elongatus PCC 6301]
gi|56687027|dbj|BAD80249.1| unknown protein [Synechococcus elongatus PCC 6301]
Length = 233
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN+W+PVA + + D + C E ++R G + + C HR L G V
Sbjct: 3 LKNYWYPVALAQKVGDRPLSVTLCGEA-IALYRDSAGQIHALSDRCVHRGAALSGGWVEN 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPG-----DE 323
+ CPYHGW+Y G C K+P+ + K+ E+ G++W++ G D
Sbjct: 62 DCLVCPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADR 121
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP +P P+ + E+ + + +NL+D AHAPFTH+ +F
Sbjct: 122 PPLPPLPEYDDPAWRTVQGEVTYT--THYTRVTENLMDFAHAPFTHSGSFGAA 172
>gi|407713699|ref|YP_006834264.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407235883|gb|AFT86082.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 350
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 131/339 (38%), Gaps = 49/339 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A+S +++ D + P +++R + G + + C HR PL LG
Sbjct: 3 IRNTWYVAAWSHEVEGDKLFSRTIINTPVMLYRKESGEVIALADRCCHRGAPLSLGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG ++ + G C + P+ + + K++ P EQ IWIW G+ P P
Sbjct: 63 DCVRCMYHGLKFDSQGACIEAPAQERIPLHAKVRQFPVVEQHRWIWIWMGE--PELADPS 120
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 376
+P + + + + + + L+ DNLLD +H P+ H +T G
Sbjct: 121 TIPDTHWVDDPQWRSLPGYIHYDVNYLLICDNLLDFSHLPYVHPTTLGGGEDYAAVRPKV 180
Query: 377 -----------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
W++ P VK + G W+ Y +F P ++ G++ G
Sbjct: 181 ERIKDGVRITRWTLNTEPPPFVKAVRDWPGNVDRWNIY----DFTIPAILRMDSGMAPVG 236
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYLWRHFA 477
+ R A H P + T + SLD V + +
Sbjct: 237 TGAPEGKRVDAAEFHGCQALTPETEGSTHYFFAHPHNFSLDKPEVTRSI-------HQSV 289
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ED +V Q + + +P G D ++R
Sbjct: 290 VDAFDEDREMVSAQHRNLALDPDFKMMPFGIDAALSQFR 328
>gi|409400349|ref|ZP_11250444.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
gi|409130634|gb|EKN00384.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
Length = 342
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A +L + + C E+ V +RG G V++ C HR PL LG V +
Sbjct: 3 LKNAWYVAAMPDELAETPLGRTICGEK-MVFYRGAGGKVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIP 330
G++ C YHG +GK +MP ++ IKS E+ G IW+WPGD+ ATI
Sbjct: 62 GKLVCGYHGLAMGCEGKALEMPGQRVNGFPAIKSYAVEERYGFIWVWPGDKAKADPATIH 121
Query: 331 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L E + + + ++ L++DNL+DL H + H + +
Sbjct: 122 HLEWAVNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHAGSIGQ 167
>gi|425450965|ref|ZP_18830788.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 7941]
gi|389767970|emb|CCI06791.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 7941]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P +I I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|67921279|ref|ZP_00514798.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67857396|gb|EAM52636.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 28/349 (8%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T L+N W+ DLK MV EP +I R KDG +++ C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHRKMLGEPVLIGRRKDGQVFAMRDICPHRGIPLRYGW 61
Query: 271 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 319
+ + C YHGW ++T DG C ++PS + +KI + C E +G IW++
Sbjct: 62 MEGEDVCCCYHGWRFNTEDGGCREIPSLTEHDNLDISRIKIPTYACREVQGHIWVYFAED 121
Query: 320 ------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P D PP TIP G + I I+H ++ L+D AH P+ H+S +
Sbjct: 122 SKKEVDPADIPPVPTIP-DFGKIGPGVSETIHFACHIDHAII--GLMDPAHGPYVHSSWW 178
Query: 374 AKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCA 432
+ VK QG+ PY + + RP ++ + I E + R
Sbjct: 179 WRSGPRKFRVKEKQYEPVSQGFRLVPYDMPVSARPYKILGDNVSIEI--VFELPSVRTEI 236
Query: 433 THLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDLRLVL 489
+ CL ++ T + + F S+ +P+M + L + L +D +V+
Sbjct: 237 LRGDRYSACLLTT--ITPIDETQCIAFQSIYWTIPWMGVFKPLLSLLTRKFLAQDRDVVI 294
Query: 490 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
QQE + ++ + + +R+ + + A+ PF P++ +
Sbjct: 295 QQQEGLAYNPSLMLIDDADTQAKWYFRIKYEYQKAIAENRPFKNPIEPK 343
>gi|390575204|ref|ZP_10255311.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
gi|389933006|gb|EIM95027.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
Length = 357
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ D+ M P EP V++R +DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAWDADVTHKLM-PVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATI 329
+++C YHG + +G C + P + K++S P E+ G++WIW G DE ATI
Sbjct: 62 DQVECGYHGLTFDCEGACVRAPGSPRIPPGAKVRSYPLAERYGLLWIWMGDADEADAATI 121
Query: 330 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 122 VQIDEWGDPAWGVNRGDAMTVECHYLYVTDNLLDPSHVAWVHPSSFGNAACEAEPLKTEV 181
Query: 388 PASGL 392
A G+
Sbjct: 182 AAHGV 186
>gi|425463589|ref|ZP_18842919.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9809]
gi|389831031|emb|CCI26511.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9809]
Length = 349
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 54/359 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGD--- 322
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 323 EPPTATIPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
E +P + S F +I I + I+H ++ L+D AH P+ HTS + +
Sbjct: 125 EIKQENLPPVPIISDFGKLTPKIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWWRSG 182
Query: 378 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
VK + ++P P+ P M +S +KP K+ G +
Sbjct: 183 PRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI------E 224
Query: 438 LHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHFAEQ 479
+ LPS R + R ++ F ++ + + F+ L R+ Q
Sbjct: 225 IVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYLTRQ 284
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++ +
Sbjct: 285 FLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIKAQ 343
>gi|256394032|ref|YP_003115596.1| Vanillate monooxygenase [Catenulispora acidiphila DSM 44928]
gi|256360258|gb|ACU73755.1| Vanillate monooxygenase [Catenulispora acidiphila DSM 44928]
Length = 336
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 142/334 (42%), Gaps = 45/334 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A+++++ T + EP V +R G+DG + + C HR PL ++
Sbjct: 7 RNQWYVAAYASEVGR-TFLARTILGEPIVFYRTGQDGRAVALADRCVHRRYPLSESRLDG 65
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I C YHG+ Y T G C +P Q R ++ S P E + +W+W GD P
Sbjct: 66 DTIVCGYHGFTYDTSGTCVFVPGQQRIPRTARVASYPVAELDSFVWVWIGD--PELADDK 123
Query: 332 LLPPSGFEIHAEIV----ME-LPIEHGLLLDNLLDLAHAPFTH-----------TSTFAK 375
L+P + E V ME + ++GLL+DNLLDL+H + H T
Sbjct: 124 LIPRAPHMADPEFVTVSGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVADTPITTD 183
Query: 376 GWSVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 423
+V+ F ++G+QG D+E+ PC+ L I+ G+
Sbjct: 184 ADEQAGIVRVARHMVDAACPPFYAKSTGIQGRITRLQ-DIEYFAPCLYLLHSRITPAGE- 241
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 483
QN + PS+ + + +S +FA+ P + R F QV+ +
Sbjct: 242 --QNP---LFRTEITYAITPSAPGQVYDFWAVSRNFAT---DDPAVTEFLRDFNHQVVMQ 293
Query: 484 D-LRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
D + L + Q+ + A L +G D G+ R
Sbjct: 294 DVVALNILQKALDSESAGYQELSIGIDAGGLAAR 327
>gi|420249650|ref|ZP_14752889.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398063536|gb|EJL55262.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 357
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ D+ M P EP V++R +DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAAWDADVTHKLM-PVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG--DEPPTATI 329
+++C YHG + +G C + P + K++S P E+ G++WIW G DE ATI
Sbjct: 62 DQVECGYHGLTFDCEGACVRAPGSPRIPPGAKVRSYPLAERYGLLWIWMGDADEADAATI 121
Query: 330 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 122 VQIDEWGDPAWGVNRGDAMTVDCHYLYVTDNLLDPSHVAWVHPSSFGNAACEAEPLKTEV 181
Query: 388 PASGL 392
A G+
Sbjct: 182 AAHGV 186
>gi|254409954|ref|ZP_05023734.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182990|gb|EDX77974.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 446
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 50/336 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 275
W+PV + DL F VI+ K V + C HR PL G + E G
Sbjct: 11 WYPVHYLKDLDQSQPTQFTLLGRDLVIWWDKVADRWRVFDDQCPHRLAPLSQGRIAEDGL 70
Query: 276 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPT 326
++CPYHGW ++ G C+++P + + + +LP E +G+++++PG + P
Sbjct: 71 LECPYHGWAFTGAGTCDRIPQQTEDSSAQTSQRACVTALPTTECQGLLFVYPGNPENAPN 130
Query: 327 ATIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPS 381
+P + P P G+ + + +LP + LL+N+LD++H PFTH + + + ++ P
Sbjct: 131 VKVPIVEPLDDSPEGW-VCIDTFRDLPYDALTLLENVLDVSHVPFTHHRSVSDRAYASP- 188
Query: 382 LVKFLTPASGLQGY---WDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
V+ SG QG+ W+ P D F P ++ + + G+
Sbjct: 189 -VELEVTESGKQGFKGVWEQGPRKGTLGRQDTTFLAPTLMWHDLTSKQFGR--------- 238
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVL 489
+ P + + RL R FAS L + + H + + ED ++ L
Sbjct: 239 ---TMTVVYATPIRKGECRLFARFPFKFASKLPGFFIKLTPRWYSHIGQNGVLEDDQIFL 295
Query: 490 GQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
QE N + + LP D+ R W
Sbjct: 296 HYQEHYLESKGGSANFSKAFYLPTKADRFVFELRQW 331
>gi|294011169|ref|YP_003544629.1| putative Rieske protein [Sphingobium japonicum UT26S]
gi|292674499|dbj|BAI96017.1| putative Rieske protein [Sphingobium japonicum UT26S]
Length = 430
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 144/355 (40%), Gaps = 37/355 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK W+ A S+++ + +IFR G +Q+ C HR PL +GS
Sbjct: 76 LKRAWYVAALSSEVDATQLFHRRILGMSVLIFRDAQGEAVALQDRCPHRFAPLSMGSRVG 135
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS--TQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I CPYHG + G C P QL R ++ P E+ G IWIW +E A P
Sbjct: 136 DAIACPYHGLRFDAGGHCVHNPHGRGQLPRGQVVRGFPLIERHGFIWIWMAEE---AADP 192
Query: 331 CLLPPSG--FEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 383
LLP HA V M+LP+++ L+LDN++DL+H + H +G P +
Sbjct: 193 ALLPDFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITTRGQLSPLIP 252
Query: 384 KFLTPASGLQGYWD-----PYPIDMEF--RPPCMVLSTIGI--SKPGKLE-----GQNTR 429
+ + + WD P I F RP +I + + P ++ Q+
Sbjct: 253 QVEETENSVSASWDYSQTPPIGIFAPFLPRPEEAARHSIRVTWTAPANIQLSIAAAQDDA 312
Query: 430 QCATHLHQ--LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
+ Q LH C P +T + + A + H A + ED +
Sbjct: 313 PFEQGISQYDLHSCTPGDENETHYFFATRRNHAEEDGDYNAFKTAAMHAAFET--EDGPI 370
Query: 488 VLGQQERMNNGANVWNL-PV----GYDKLGVRYRLWRDALEKGAKQLPFMKPMQT 537
+ Q M G + ++L P+ + VR RL R +GA +L P +T
Sbjct: 371 IAAAQREM-GGEDFFDLKPMLLSNDLAAVKVRRRLQRAVELEGAMELEDATPGRT 424
>gi|163795088|ref|ZP_02189056.1| oxidase-related protein [alpha proteobacterium BAL199]
gi|159179486|gb|EDP64015.1| oxidase-related protein [alpha proteobacterium BAL199]
Length = 357
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 15/174 (8%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
++ L++ W+ S +L + P EP + R G +++ C HR PL G
Sbjct: 14 DSFLRDIWYFALPSAELGRGALRPKTLLGEPVLFGRDDSGAVFAMRDICPHRGIPLSDGR 73
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 324
++G ++C YHGW ++TDG+C +PS + +++++ P ++ G IW++ +P
Sbjct: 74 FDQGEVECCYHGWRFATDGRCTAIPSLTVDQTMDVDKIRVRTYPVVDRHGAIWVYMPADP 133
Query: 325 PTATIPCLLPPSGFEIHAE-----IVMELP--IEHGLLLDNLLDLAHAPFTHTS 371
+ P + PP E+ M P I+H ++ L+D AH PF HTS
Sbjct: 134 RSTAEPAVSPPVLPEVTNRGPGMVQRMSFPCHIDHAVI--GLMDPAHGPFVHTS 185
>gi|172036878|ref|YP_001803379.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354554681|ref|ZP_08973985.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171698332|gb|ACB51313.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353553490|gb|EHC22882.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 465
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 126/295 (42%), Gaps = 23/295 (7%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 275
W+PV + DL F E+ VI+ ++ CV + C HR PL G +NE G
Sbjct: 30 WYPVHYIEDLDKTKPTSFTLLEKNIVIWWDENNSQWCVFDDQCPHRLAPLSQGRINESGC 89
Query: 276 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPT 326
++CPYHGW +S G CE +P + Q +K+ P +G+++++ G + P
Sbjct: 90 LECPYHGWAFSGQGNCEVIPQQKPEGKAEQSPRASVKTYPTKVAQGLLFVYAGKTENAPK 149
Query: 327 ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV-PSL 382
IP L S + ++P + L++N+LD +H P+TH + +V P
Sbjct: 150 TPIPLVDVLDEKSDEWVCINTFRDIPYDALTLMENVLDSSHIPYTHHKSVGNRSNVSPVD 209
Query: 383 VKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVC 441
++ + G +G W+ P R + T PG + T + +
Sbjct: 210 LEVVESGKWGFKGVWEEGP-----RKGTLGKQTTYFFAPGMMYHDLTSKQFGRTLTVVYA 264
Query: 442 LPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDLRLVLGQQER 494
P + K RL R F+S + + + H + + ED ++ L QER
Sbjct: 265 TPIGKGKCRLFARFPFKFSSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLHYQER 319
>gi|239813648|ref|YP_002942558.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239800225|gb|ACS17292.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 353
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 142/349 (40%), Gaps = 48/349 (13%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 260
+N PY + N W+ A++ DL M + P +++R +DG P +++ C
Sbjct: 1 MNTDASPSPY---VHNAWYVAAWAKDLVH-AMRAITIMDRPVLLYRTEDGRPIALEDRCC 56
Query: 261 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWI 318
HR PL G++ +QC YHG+ + G+C +P+ + ++K P E ++WI
Sbjct: 57 HRRVPLSRGTLIGDTVQCGYHGFTFDCSGQCIAIPNQEQIPPRARVKGYPVCEMHHLVWI 116
Query: 319 WPGDEPPTATIPCLLPPSGFEI-----HA--EIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
W GD P L+P F + HA M + L++DNL DL+H F H+S
Sbjct: 117 WMGD--PARADEALVP--DFSVLSDPRHAWERDYMHAKGNYRLIVDNLNDLSHLSFVHSS 172
Query: 372 TFAKGWSVPSLVKFLTPASGL-QGYWD---------------PYPID----MEFRPPCMV 411
T + + ++ G+ Q W PID + F PP
Sbjct: 173 TIGNAATALAELEVSDGEQGVTQTRWMINTPPPPTYQRLAGFEGPIDRWQVIAFLPP--- 229
Query: 412 LSTIGISKPGKLEGQNTRQC----ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP 467
+T+ I G+ R + LH P + + + + DF + V
Sbjct: 230 -TTVRIRTGGRARSNGERNFDGDDTIGMVALHAITPETATTSHYFWAQTHDFRTDEPAV- 287
Query: 468 FMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
Q L++ ++ +EDL + QQ + N N + D+ + R
Sbjct: 288 -TQSLFQEI-KKAFHEDLEIFALQQAAIQNDPNGEEISCRADRAQIAVR 334
>gi|398993794|ref|ZP_10696729.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133702|gb|EJM22887.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 352
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V+N C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIVSKPLGRQICGEKI-VFYRGHEGRVAAVENFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQ--DKADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ +QG +W D P+D F PP VL +G++
Sbjct: 176 LTTVQGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTDTIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLDMLEQQQQNLLANPERNLLKLNIDAGGVQSR 330
>gi|398860648|ref|ZP_10616294.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
gi|398234418|gb|EJN20293.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM79]
Length = 348
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ + G +W D P+D F PP VL +G++
Sbjct: 176 VTTVDGDEVVTARHMENIMPPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G RQ + P + + M+ +F + R
Sbjct: 236 HAGHGGYHAPRQFKASSIVVDFITPQTETSIWYFWGMARNFNP---QDEALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLSHPARNLLKLNIDAGGVQSR 330
>gi|317970428|ref|ZP_07971818.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CB0205]
Length = 432
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 138/317 (43%), Gaps = 55/317 (17%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPG-CVQNTCAHRACPLHLG 269
+ R +N WFPVAF DL + PF + V++ + + C HR PL G
Sbjct: 3 SNRWQNAWFPVAFLRDLDRNRPTPFTLVGQDLVLWFDRQADEWRAFADVCPHRLVPLSDG 62
Query: 270 SVNE-GRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPG-- 321
+N G ++CPYHGW + G+C P S+ +S +G+++++ G
Sbjct: 63 RLNAAGELECPYHGWSFDGSGRCTLQPQAEPGSSISGRSHCRSYATACAQGLLFVFSGPS 122
Query: 322 ---DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
E P +P +L +G+ + + +LP++ LL+N+LD +H PFTH +T + +
Sbjct: 123 EQAREQPLPLVP-VLDEAGWVVQ-DTFRDLPMDALTLLENVLDASHVPFTHHATVGRREN 180
Query: 379 VPSLVKFLT--PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL- 435
+ LT G G W+ P + GKL Q+TR A L
Sbjct: 181 AAPVALALTGFDRDGFTGLWEEGP------------------RRGKLGSQHTRFLAPGLM 222
Query: 436 -HQLHV-----------CLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAE 478
H L +P+ + RL+ R F+S +L+ P Q+L +H
Sbjct: 223 WHDLTAKGFARILTVVYAVPTRPGECRLIARFPFQFSSPWPGRLLRLRP--QWL-QHIGN 279
Query: 479 QVLNEDLRLVLGQQERM 495
+ ED +L L QER+
Sbjct: 280 HTVLEDDQLFLHWQERV 296
>gi|424776775|ref|ZP_18203751.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
gi|422888068|gb|EKU30460.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
Length = 347
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A +T L ++ P E V++R +DG P ++++C HR PL G +
Sbjct: 3 VRNAWYVGALATQLGR-SLQPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+++C YHG + G C K P R+ ++S PC E+ G++W+W GD P A
Sbjct: 62 DQVECGYHGLTFDCSGSCTKAPGVAQIPRSAVVRSYPCTERFGLVWVWMGD-PELADPSK 120
Query: 332 LLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L+ +E ++ MEL + + DNLLD +H + H S+F
Sbjct: 121 LIDIPEWENPEWGVNRGDAMELDCNYLYVTDNLLDPSHVSWVHQSSFG 168
>gi|285019794|ref|YP_003377505.1| vanillate o-demethylase oxygenase subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283475012|emb|CBA17511.1| probable vanillate o-demethylase oxygenase subunit protein
[Xanthomonas albilineans GPE PC73]
Length = 358
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 112/279 (40%), Gaps = 38/279 (13%)
Query: 208 QPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 267
QP N W+ +A+ ++K + C E V++R G +++ C HR PL
Sbjct: 3 QPIPAFPLNAWYAIAWDHEVKHALLARKICNLEI-VLYRTSSGHVAALEDACWHRLVPLS 61
Query: 268 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPP 325
+G + + C YHG Y +G+C MPS N ++ P E+ +W+WPGD
Sbjct: 62 MGRLRGDDVVCGYHGLAYDANGRCVHMPSQDTINPAACVRRFPTVERHRYVWVWPGD--A 119
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--- 376
P L+P G+ + + ++ L+LDNL+DL H F H S+ +
Sbjct: 120 ALADPALVPDLHWNDDPGWAGDGRTIA-IKCDYRLVLDNLMDLTHETFVHGSSIGQDEVA 178
Query: 377 -----------------WSV-----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 414
W + P L A G +G D + I + F PC +
Sbjct: 179 EAPFDVVHGERSVVVSRWMLEIDPPPFWAWQLEHAHGYRGKVDRWQI-IRFEAPCTIAID 237
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
+G++ G Q R + + L+ P + + +
Sbjct: 238 VGVAVAGSGAPQGDRSRGVNGYVLNTVTPETERSCHYFW 276
>gi|254412665|ref|ZP_05026438.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180400|gb|EDX75391.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 443
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 146/339 (43%), Gaps = 45/339 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+P++ DL P VI++ V + C HR PL G V+E G
Sbjct: 11 WYPLSPVEDLDPKQPTPVTVLGLRLVIWKPPSSPTYRVFLDQCPHRLAPLSEGRVDEKTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQEGMIWIWPGDEPP- 325
+ C YHGW++++ G C +P + N+ +++LPC ++ ++W+W P
Sbjct: 71 NLVCSYHGWQFNSQGICTHIPQAETPQIVTNNQDNICVQTLPCCQENDLLWVWLDANSPE 130
Query: 326 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 378
A P L P GF + + +V +L + L++N+ D +H PF H + +
Sbjct: 131 LAAATPRPLSPQVDASKGF-VWSSMVRDLDYDWQTLVENIADPSHVPFAHHGVQGNRDQA 189
Query: 379 VPSLVKFL-TPASGLQG-YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
P ++ + + A+ ++G + M F PPC + I G+ G T
Sbjct: 190 QPIAIEIVQSTANRIEGNTVGRFNTKMTFEPPCHLEYAISFGDKGQQVGLVT-------- 241
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 494
C+P + K+R++ + +FA L + W H + VL+ D+ ++L QQER
Sbjct: 242 ---YCIPVAPGKSRIVAQFPRNFAKSLSRL--TPRWWNHITVRNLVLDGDM-ILLHQQER 295
Query: 495 -------MNNGANVWNLPVGYDKLGVRYRLWRDALEKGA 526
+ + + L D+ + +R W D +G
Sbjct: 296 FLQQRQSVESWKTAYKLLTSADRFVIEFRKWFDKYCQGT 334
>gi|73538170|ref|YP_298537.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72121507|gb|AAZ63693.1| vanillate demethylase subunit A [Ralstonia eutropha JMP134]
Length = 350
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 132/340 (38%), Gaps = 51/340 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ + ++ + P +++R +DG +++ C HR PL +G
Sbjct: 3 VRNTWYVAGWDNEVGASNLFSRTIIGIPVLMYRAEDGTLHALEDRCCHRGAPLSIGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG ++ T G+C + P+ Q +++ LP E+ IWIW GD P A P
Sbjct: 63 DCVRCMYHGLKFDTSGRCIEAPAQQRIPPQARVRVLPVVERNRWIWIWMGD--PEAADPA 120
Query: 332 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-------- 376
L+P P+ + I + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTHWLADPAWRSLDGYIHYD--VNYLLIADNLLDFSHLPFVHPTTLGGSEAYAAAQP 178
Query: 377 -------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
W++ P K + G W+ Y F P ++L G++
Sbjct: 179 KVERLDDGVRITRWTLNTEAPPFAKQVKNWPGKVDRWNIY----NFTIPAILLMDSGMAP 234
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R A P + T + +FA V R +
Sbjct: 235 TGTGAPEGQRIDAAEFRGCQALTPETENSTHYFFAHPHNFAIDNPEVT------RSIHQS 288
Query: 480 VL---NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V+ +ED ++ QQ + + +P D ++R
Sbjct: 289 VVTAFDEDRDIITAQQRSLALAPDFKMVPFSIDAALSQFR 328
>gi|302187358|ref|ZP_07264031.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae 642]
Length = 354
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R +D V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQDQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEE---LTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|443323888|ref|ZP_21052865.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796320|gb|ELS05613.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 469
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 130/309 (42%), Gaps = 23/309 (7%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHR 262
+G + + +K W+PVA+ DL F E V++ K + C HR
Sbjct: 12 AGGTEATSFDVKEAWYPVAYLDDLDKTKPTTFTLLEIDLVLWWDAKSQSWRAFVDQCPHR 71
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS-------LPCFEQEG 314
L G +NE G ++CPYHGW +S G CE +P N S P +G
Sbjct: 72 LASLSEGRINEQGLLECPYHGWSFSGSGNCEDIPQQSATNQANTSKRACATAYPTQTAQG 131
Query: 315 MIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+++++PG +P + E + ++ +LP + LL+N+LD++H P+TH
Sbjct: 132 LLFVYPGKAAMANQVPVPIVEPIEESPEEWVCLDLFRDLPYDALTLLENVLDVSHVPYTH 191
Query: 370 TSTFAKGWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
T +K + + +T + +G QG W+ P E T I+
Sbjct: 192 HKTVSKRSNAAPVDLAVTQSDKNGFQGVWEEGPRKGELG----TQYTSFIAPSLMWHDLT 247
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLNEDL 485
++Q L ++ P + + RL R FAS + + + H + + ED
Sbjct: 248 SKQFGRTLTVVYAT-PIRKGQCRLFARFPFKFASPIPAFFIKLTPRWYSHVNQHTVLEDD 306
Query: 486 RLVLGQQER 494
++ L QER
Sbjct: 307 QIFLHHQER 315
>gi|393778388|ref|ZP_10366662.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
gi|392714659|gb|EIZ02259.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
Length = 360
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 23/182 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+P+ ++ D+ + + EE V++R +DG +Q+ C HR PL LG +
Sbjct: 4 VRNVWYPLGWAEDIGRE-LSRHMVLEEAIVVYRREDGKIAALQDACPHRLAPLSLGKLKG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHG + GKC ++P ++ N +++ P E+ G+ WIW GD P
Sbjct: 63 DTIECGYHGMTFDCSGKCVRIPGQEIIPGNAVVRAYPIEEKYGLAWIWMGD-------PA 115
Query: 332 LLPPSGFEIHAEI-----------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWS 378
L P+ A+ + + + L DNLLD AH F H ST G +
Sbjct: 116 LADPAKLFHIAQYDDPNWRAVKGGTLRIDCNYLSLCDNLLDPAHVTFVHPSTLGTPAGAT 175
Query: 379 VP 380
VP
Sbjct: 176 VP 177
>gi|318040272|ref|ZP_07972228.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
CB0101]
Length = 437
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 41/309 (13%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVI-FRGKDGIPGCVQNTCAHRACPLHLGS 270
T + W+ VAF DL PF E V+ F G + + C HR PL G
Sbjct: 9 TSWTHAWYAVAFLRDLDPKRPTPFTLMGEDLVLWFERSSGQWRALADVCPHRLVPLSDGR 68
Query: 271 VNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-----KIKSLPCFEQEGMIWIWPGDEP 324
+NE G ++CPYHGW ++ +G+C +P Q + + +G+++++ GD
Sbjct: 69 LNEAGELECPYHGWTFNGEGRCTAIPQAQEGSTISPRSHCRGYATATGQGLLFVFSGDIA 128
Query: 325 PTATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
A P L P G+ + + +LP++ LL+N+LD++H PFTH +T + +
Sbjct: 129 EAADHPLPLVPEIDQPGWLVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHATVGRRENAG 187
Query: 381 SLVKFLTP--ASGLQGYWDPYP----IDMEFR---PPCMVLSTIGISKPGKLEGQNTRQC 431
+ L G G W P + EF PC++ + T +
Sbjct: 188 PVELELNSFGPEGFTGVWQEGPRRGKLGSEFTTYAAPCLMWHEL------------TAKG 235
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDF-----ASVLKHVPFMQYLWRHFAEQVLNEDLR 486
+ + P R + RL+ R F A +L+ P ++L +H V+ ED +
Sbjct: 236 FARIFTVVYATPIRRGECRLITRFPFKFNSPWPARLLRLRP--EWL-QHLGNHVVLEDDQ 292
Query: 487 LVLGQQERM 495
L L QER+
Sbjct: 293 LFLHWQERV 301
>gi|428223387|ref|YP_007107557.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
gi|427996727|gb|AFY75422.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
Length = 455
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 28/337 (8%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHR 262
+G P K W+PV++ TDL+ F ++ V++ ++ + C HR
Sbjct: 21 AGGTDPAYFDPKEAWYPVSYITDLERTKPTAFTLLDQDLVLWWDQNNKTWRAFADQCPHR 80
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 314
L G + E G I+CPYHGW + +G C+++P + Q +KS +G
Sbjct: 81 LARLSEGRIAEDGLIECPYHGWAFKGNGSCDRIPQKVKGGTAEQSSRACVKSYATATAQG 140
Query: 315 MIWIWPGDEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
++++ G+ +P + P + + +LP + LL+N+LD +H PFTH
Sbjct: 141 LLFVCLGEYASQVKVPIIDALEQSPEAW-VCLNTFRDLPYDASTLLENVLDSSHLPFTHH 199
Query: 371 STFAKGWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
+ + + LT + SG G W P + T+ I+ +
Sbjct: 200 ESVGNRANAAPVELELTRSDKSGFTGVWAEGPR----KGTLGTQDTVFIAPNLMWHDLTS 255
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLR 486
+Q + ++ P + + RL R F+S + + + H + + ED +
Sbjct: 256 KQFGVTMTVVYAT-PMRKGECRLFARFPFQFSSKIPEFFIKLTPQWFSHINQNAILEDDQ 314
Query: 487 LVLGQQERM-----NNGANVWNLPVGYDKLGVRYRLW 518
+ L QER N A + LP D + YR W
Sbjct: 315 IFLHHQERYLELQKTNFAQAYYLPTKADLFVIEYRKW 351
>gi|166367445|ref|YP_001659718.1| Rieske 2Fe-2S family protein [Microcystis aeruginosa NIES-843]
gi|166089818|dbj|BAG04526.1| rieske 2Fe-2S family protein [Microcystis aeruginosa NIES-843]
Length = 349
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 60/362 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-PGDE-- 323
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ P D
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFIPADSKR 124
Query: 324 -------PPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP TI L P ++ I + I+H ++ L+D AH P+ HTS +
Sbjct: 125 EINRENLPPVPTIADFGKLTP---KVAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
+ VK + ++P P+ P M +S +KP K+ G
Sbjct: 180 RSGPRQFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGSKVSI---- 223
Query: 435 LHQLHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHF 476
++ LPS R + R ++ F ++ + + F+ L R+
Sbjct: 224 --EIVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYL 281
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
Q L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++
Sbjct: 282 TLQFLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIK 341
Query: 537 TR 538
+
Sbjct: 342 AQ 343
>gi|414172135|ref|ZP_11427046.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
gi|410893810|gb|EKS41600.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
Length = 343
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+PV ++ D + EEP VI+R +DG +Q+ C HR PL LG +
Sbjct: 4 VTNAWYPVVWA-DRVGRELTRHVVLEEPIVIYRLEDGSIAALQDACPHRLAPLSLGKLKG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHG + GKC +P + N ++S P + G++W+W GD P A +
Sbjct: 63 DNIECGYHGMTFDCSGKCVLIPGQDVIPGNALVRSYPLQIKYGLVWLWMGD-PKKADLSK 121
Query: 332 LLPPSGFEI---HAEIVMELPIEHGL--LLDNLLDLAHAPFTHTSTFA--KGWSVP 380
+ +E HA L IE L DNLLD AH F HT+T G +VP
Sbjct: 122 MFHLPQYEAEGWHAVQGDTLRIECNYLSLCDNLLDPAHVTFVHTTTLGTPAGATVP 177
>gi|299533883|ref|ZP_07047249.1| Rieske (2Fe-2S) protein [Comamonas testosteroni S44]
gi|298718110|gb|EFI59101.1| Rieske (2Fe-2S) protein [Comamonas testosteroni S44]
Length = 346
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 103/246 (41%), Gaps = 47/246 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ + ++ D + E +RG G+ V++ C HR PL LG V E
Sbjct: 3 LLNTWYVACKADEIPQDKPLGRTICNERMAFYRGPQGV-AAVEDFCPHRGAPLSLGFVCE 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G++ C YHG E +GK MP ++R +I+S P E+ G +W+WPG + P L
Sbjct: 62 GKLICGYHGLEMGCEGKTIAMPGQRVRGFPEIRSFPVVERYGFVWVWPGRK--EEADPGL 119
Query: 333 LPPSGFEIH---------AEIVMELPIEHGLLLDNLLDLAHAPFTH-------------- 369
+P E+H + H L++DNL+DL H + H
Sbjct: 120 IP----ELHWADNPQWAYGGGYYHIKASHLLMIDNLMDLTHETYVHASSIGQKEIDETPC 175
Query: 370 ----------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTI 415
TS F +G +P F A G D P+D F PP V+ +
Sbjct: 176 TTKVEGDHVTTSRFMEG--LPEAPPFWRMALRGNGLPDDQPVDRWQICHFEPPSHVMIEV 233
Query: 416 GISKPG 421
G++ G
Sbjct: 234 GVALAG 239
>gi|137442|sp|P12609.1|VANA_PSES9 RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|279997|pir||A43652 vanillate O-demethylase oxygenase (EC 1.14.-.-) Rieske iron-sulfur
component - Pseudomonas sp
gi|151636|gb|AAA26019.1| monoxygenase [Pseudomonas sp.]
Length = 329
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 39/254 (15%)
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
E VI+RG +++ C HR PL LGS+ +G++ C YHG DG+ MP+ ++
Sbjct: 5 ERMVIYRGAGQRVAALEDFCPHRGAPLSLGSIQDGKLVCGYHGLVMDCDGRTASMPAQRV 64
Query: 300 RNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFE-----IHAEIVMELPIEHG 353
+ I++ P E+ G IW+WPGD P L+P + + + + ++
Sbjct: 65 QAFPCIRAFPAQERHGFIWVWPGDA--ALADPALIPHLEWAENPAWAYGGGLYHIACDYR 122
Query: 354 LLLDNLLDLAHAPFTHTST------------------------FAKGWSVPSLVKFLTPA 389
L++DNL+DL H + H S+ F +G P +
Sbjct: 123 LMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVEGDRLITGRFMEGILAPPFWRAALRG 182
Query: 390 SGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 445
+GL D P+D F PP VL +G++ G+ C + P +
Sbjct: 183 NGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHAGRGGYDAPADCKASSIVVDFITPET 239
Query: 446 RKKTRLLYRMSLDF 459
+ M+ F
Sbjct: 240 DTSIWYFWGMARSF 253
>gi|428771559|ref|YP_007163349.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685838|gb|AFZ55305.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 444
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 146/346 (42%), Gaps = 47/346 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVNE--G 274
W+P+ DL+ + F + VI++G K + C HR PL G ++E G
Sbjct: 11 WYPIFPLEDLEINKPQSFTLLGQRLVIWKGEKQKKFQVFLDLCPHRLAPLSEGRIDEETG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLR--------NVKIKSLPCFEQEGMIWIWP------ 320
+ C YHGW+++ G C +P + + N +K P E+ ++W+W
Sbjct: 71 NLMCSYHGWQFNEKGICTCIPQAENQELVVKNQHNFAVKVFPTREENDLLWVWADANTPD 130
Query: 321 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 378
++ P P + GF + + +V +L + ++N+ D +H PF H + +
Sbjct: 131 LAEKKPLPLSPQIDKERGF-VWSSMVRDLEYDWQTFIENVADPSHVPFAHHGLQGNRKQA 189
Query: 379 VPSLVKFLTPASGL--QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
P ++ + + L + + F PP + IG G+ G T
Sbjct: 190 QPIAIEIVKSSVNLIEAKVSRLFTTTITFEPPSRLEYAIGFGDKGQQLGLIT-------- 241
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLRLVLGQQER 494
C+P K R++ + + +FA L + W H + VL+ D+ ++L QQER
Sbjct: 242 ---YCIPIEPGKCRIVAQFARNFAYSLHKI--TPRWWEHIKTRNAVLDGDM-ILLHQQER 295
Query: 495 M-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
N N + +P D+L + +R W D +G +LP+ K
Sbjct: 296 FLQQKLAGENWKNSYKMPTKADRLVIEFRRWFDIYCEG--KLPWEK 339
>gi|83944091|ref|ZP_00956547.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
gi|83844958|gb|EAP82839.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
Length = 355
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 109/267 (40%), Gaps = 37/267 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ +STD D+ +VP + V +R DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDE-LVPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTA 327
IQC YHG + DG C ++P S ++ + S P E+ G+++IW GD +P A
Sbjct: 63 DTIQCGYHGMTFGADGACVRVPGQSNLPKSAYVDSYPVLERHGIVFIWMGDADKADPALA 122
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK- 384
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 123 FDMPELGQEGWHVHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVKT 182
Query: 385 ------------------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIGISKPGKL 423
F G G W Y + M P + G S KL
Sbjct: 183 ADEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHYYYLHM----PSTAVIDFG-SSDAKL 237
Query: 424 E-GQNTRQCATHLHQLHVCLPSSRKKT 449
E ++ R + LH P + T
Sbjct: 238 ELPEDQRNKGVRIFALHFVTPVTEDYT 264
>gi|148557165|ref|YP_001264747.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502355|gb|ABQ70609.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 351
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ ++ D + EE V FRGKDG+ + + C HR PL LGSV +
Sbjct: 10 LRNAWYMFAWGEEVADAPLGRTIAGEE-LVCFRGKDGLV-VLADRCPHRFVPLSLGSVAD 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G ++C YHG + +DG+C P ++S P E++ +IW+W GD P L
Sbjct: 68 GVLECAYHGLRFGSDGRCMFNPLGDPPERAVVRSYPVVERDRVIWVWTGD-------PAL 120
Query: 333 LPPSG---FEIHAEIV-------MELPIEHGLLLDNLLDLAHAPFTH------------- 369
P G F A+ + ++ L +DNL DL H F H
Sbjct: 121 ADPDGIADFSFLADPARATVTGYAHVRADYQLAIDNLSDLTHVQFVHRDYQASEAYHRLV 180
Query: 370 ------------TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
+ TF G P L FL P + + ++ + P + + +
Sbjct: 181 DDTWQDGDVVHRSITFPNGRPAPFLQSFLGPDKLID-----FTMETRWTLPSNIKLSATV 235
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
++PG + Q H H+ P + Y S D+
Sbjct: 236 TEPGAPD-----QYLIGNHSAHLVTPEADGSCHYFYAHSRDYG 273
>gi|395652321|ref|ZP_10440171.1| oxidoreductase subunit alpha [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 237
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAQKPLGRQICGEK-MVFYRGHEGAVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
R+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ + P L+
Sbjct: 63 RLVCGYHGLVMGGDGKTVDMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--SLADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ + E + ++ ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|84687663|ref|ZP_01015537.1| putative dioxygenase [Maritimibacter alkaliphilus HTCC2654]
gi|84664340|gb|EAQ10830.1| putative dioxygenase [Rhodobacterales bacterium HTCC2654]
Length = 441
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 17/184 (9%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 257
++L GP ++ +W P S+DL KD +E ++FR +G G V +
Sbjct: 8 ETLVRVGPGTTMGDMMRLYWLPFMASSDLEKDGQPQTVKLLDETLIVFRDSEGRVGLVDH 67
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQ 312
C HR PL G + ++C YHGW++ DG MP+ R+ VKIKS PC E+
Sbjct: 68 ICPHRGAPLVFGRNEDCGLRCVYHGWKFDVDGNVADMPAEPPRSRLKDRVKIKSYPCVER 127
Query: 313 EGMIWIWPGDEPPTATIPCLLPPSGFEIH----AEIVMELPIEHGLLLDNL---LDLAHA 365
G++W + GDEP + P L PS FE + +V+ ++ L L +D AHA
Sbjct: 128 GGVVWTYMGDEPDESR-PAL--PS-FEWNMVPEENVVVTFRVQECNWLQALEGEIDSAHA 183
Query: 366 PFTH 369
P H
Sbjct: 184 PILH 187
>gi|110679615|ref|YP_682622.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109455731|gb|ABG31936.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 356
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 110/267 (41%), Gaps = 33/267 (12%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T ++N W+ A+S+++ DD + F +P ++FR DG +++ C HR PL +G
Sbjct: 3 TLVRNAWYVAAWSSEI-DDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKR 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
+QC YHG + TDGKC ++P Q R + + + P E+ G++WIW G EP A
Sbjct: 62 IGDTVQCGYHGLTFDTDGKCVRVPG-QDRIPPSACVDAYPTEERSGIVWIWMG-EPERAN 119
Query: 329 IPCLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPS 381
+ F +H + + + + +NL+D AH F H +T S VP
Sbjct: 120 PDDIFDLPQFHDDSWHMHHGGALHIKSNYLNVAENLVDPAHVSFVHETTLGNSASENVPV 179
Query: 382 LVK-------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
V F G D + R PC G + +
Sbjct: 180 HVSTSGEEIIAWRWIRNSEPIGFFKAFGNFTGNVDRWHY-YHLRLPCTAYIDFGSADATR 238
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKT 449
++ R T + LH P + T
Sbjct: 239 QIAEDDRDSGTRILALHFMTPVTETYT 265
>gi|428775230|ref|YP_007167017.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
gi|428689509|gb|AFZ42803.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
Length = 440
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 42/328 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR--GKDGIPGCVQNTCAHRACPLHLGSVN--E 273
W+P+ DL D + +P I++ G + + C HR PL G V+
Sbjct: 11 WYPLLPVADLVSDRPISTHLLGQPIAIWKPTGSSHYRAFL-DRCPHRLAPLSEGRVDPKT 69
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP 325
G ++C YHGW++ +G C K+P + ++ +LP + W+WP +
Sbjct: 70 GHLECCYHGWQFDENGTCTKIPQAENAELLERNCEQLRATALPTCVANDLFWVWPDPDSA 129
Query: 326 --TATIPCLLPP-----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
A P L P GF + + V +LP + L++N+ D +H PF H S
Sbjct: 130 ELAAKTPLSLSPKIDNSKGF-LWSSYVRDLPYDWQTLVENIADPSHVPFAHHGVQGSRES 188
Query: 379 ---VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 435
+P ++ TP + +P M F PPC + I + K G T
Sbjct: 189 ATPIPMEIREATPERIVAQIDRNFPSTMTFEPPCRLEYAIQLGSEEKQIGLIT------- 241
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRH--FAEQVLNEDLRLVLGQQE 493
C+P++ K+R++ + + +FA L+ W H VL+ D+ L+ Q+
Sbjct: 242 ----YCIPTAPGKSRIVAQFARNFA--LRAKDLTPRWWEHIRLRHLVLDGDMVLLHCQEA 295
Query: 494 RMNNGAN---VWNLPVGYDKLGVRYRLW 518
+ + + +P D+ + +R W
Sbjct: 296 ALREEGHWKSAYMMPTNADRFVIAFRKW 323
>gi|126661243|ref|ZP_01732316.1| oxidase-related protein [Cyanothece sp. CCY0110]
gi|126617472|gb|EAZ88268.1| oxidase-related protein [Cyanothece sp. CCY0110]
Length = 349
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 48/359 (13%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T L+N W+ DLK MV EP ++ R +DG +++ C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHKKMLGEPVLVGRHEDGEVFAMRDICPHRGIPLQYGW 61
Query: 271 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 319
+ + C YHGW++S+ DG+C ++PS + +++ + PC E +G IW++
Sbjct: 62 IEGKDVCCCYHGWKFSSEDGRCREIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 320 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
P PP TIP + P EI I I+H ++ L+D AH P+ H+S
Sbjct: 122 SKKELDPSTIPPVPTIPDFGKVSPGLSEI---IHFACHIDHAII--GLMDPAHGPYVHSS 176
Query: 372 TFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-Q 430
+ + VK + ++P P+ P M +S ++P K+ G +
Sbjct: 177 WWWRSGPRKFRVK--------EKQYEPVPLGFRLVPYEMPVS----ARPYKILGNKVSIE 224
Query: 431 CATHLHQLHV-CLPSSRKKTRLLYRMS-------LDFASVLKHVPFM---QYLWRHFAEQ 479
L + L R LL ++ + F S+ +P+M + L +
Sbjct: 225 IVFELPSVRTEILRGDRYSACLLTTITPIDETECIAFQSIYWTIPWMGLFKPLLSLLTRK 284
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
L +D +V+ QQE + + + + +RL ++ + A+ PF P++ R
Sbjct: 285 FLAQDRDVVIQQQEGLVYDPPLMLIDDADTQAKWYFRLKQEYQKAQAENRPFKNPVEPR 343
>gi|390167216|ref|ZP_10219213.1| putative Rieske protein [Sphingobium indicum B90A]
gi|389590161|gb|EIM68162.1| putative Rieske protein [Sphingobium indicum B90A]
Length = 430
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 13/194 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK W+ A S+++ + +IFR G +Q+ C HR PL +GS
Sbjct: 76 LKRAWYVAALSSEVDATQLFHRRILGMSVLIFRNAQGEAVALQDRCPHRFAPLSMGSRVG 135
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS--TQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I CPYHG + G C P QL R ++ P E+ G IWIW +E A P
Sbjct: 136 DAIACPYHGLRFDAGGHCVHNPHGRGQLPRGQVVRGFPLIERHGFIWIWMAEE---AADP 192
Query: 331 CLLPPSG--FEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 383
LLP HA V M+LP+++ L+LDN++DL+H + H +G P +
Sbjct: 193 ALLPDFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITTRGQLSPLIP 252
Query: 384 KFLTPASGLQGYWD 397
+ + + WD
Sbjct: 253 QVEETENSVSASWD 266
>gi|328544481|ref|YP_004304590.1| vanillate O-demethylase oxygenase [Polymorphum gilvum SL003B-26A1]
gi|326414223|gb|ADZ71286.1| Vanillate O-demethylase oxygenase, iron-sulfur subunit (Modular
protein subunit from monooxygenase) (VanA-like)
[Polymorphum gilvum SL003B-26A1]
Length = 348
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 129/329 (39%), Gaps = 37/329 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + C +P V++R G + + C HR PL G +N
Sbjct: 9 NAWYAAAYDVEVGRSLLARKIC-NKPIVMYRKTTGEAVALADACWHRLVPLSGGELNGDN 67
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ CPYHG E+ G+C MPS + N +KS P E+ +WIWPGD P P +
Sbjct: 68 VICPYHGLEFDDSGRCVYMPSQETINPSACVKSYPVVEKHRFVWIWPGD--PALADPAKV 125
Query: 334 PPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P + E + + ++ L++DNL+DL H F H S+
Sbjct: 126 PDMHWINDPEWAADGKRIHVKCDYRLVVDNLMDLTHETFVHGSSIGNRAVAEAPFQTTHT 185
Query: 376 -------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
W + F G + + D + I + F+ P + +G++ G Q
Sbjct: 186 DRTATVTRWMIDIDAPPFWAGQLGRKEHVDRWQI-IHFQAPSTICIEVGVAPTGTGAPQG 244
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R L+ P + K + + + H + R V ED +
Sbjct: 245 DRSKGVEGMVLNTMTPETDKTCHYFWAFARHYDI---HNQARTHQLREGVSTVFREDEAV 301
Query: 488 VLGQQERMNNGAN--VWNLPVGYDKLGVR 514
+ QQ+ +++ + +NL + + R
Sbjct: 302 LEAQQKAIDDNPDHVFYNLNIDAGSMWAR 330
>gi|330819552|ref|YP_004348414.1| phenylpropionate dioxygenase [Burkholderia gladioli BSR3]
gi|327371547|gb|AEA62902.1| Phenylpropionate dioxygenase [Burkholderia gladioli BSR3]
Length = 369
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+P+A+S +LK + +P V+FRG+ G +++ CAHR PLH G V+
Sbjct: 31 DFWYPLAWSRELKRGKTLGVQFAGDPIVLFRGESGTVFALEDRCAHRQVPLHAGVVDGDA 90
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPG-----DEPPTA 327
++C YHGW Y GKC +P +L N +++ PC E G+I+++ G DE P
Sbjct: 91 LRCGYHGWTYDCSGKCVDVPYLGKERLPN-GVRAYPCREVRGLIFVFTGDPALADEKPVP 149
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+P + P + + + +NL+D+ H F H
Sbjct: 150 ELPTVADPK--YKTRRFGRAVKCHYSFMHENLMDMNHQ-FLH 188
>gi|389684127|ref|ZP_10175458.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis O6]
gi|388552466|gb|EIM15728.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis O6]
Length = 353
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 34/239 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGLEGRVAAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPTTRVE 180
Query: 376 GWSVPS---LVKFLTP-----ASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
G V + + + P A G D P+D F PP VL +G++ G+
Sbjct: 181 GNEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHAGQ 239
>gi|170690598|ref|ZP_02881765.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
gi|170145033|gb|EDT13194.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
Length = 352
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A S+++ D + +EP V++R G + + C HR PL G V +
Sbjct: 4 LLNAWYVAALSSEVTADAPLARTLLDEPVVLYRVAGGQAVALADRCPHRFAPLSRGRVVD 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
G ++CPYHG + +G+C P R + + P E+ G IW WPGD + P
Sbjct: 64 GALECPYHGLRFGAEGRCVFNPHGDGRVPARAEARHYPVRERYGAIWFWPGDPQRASNTP 123
Query: 331 C-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L P F +E + + L DNLLDL+H + H T
Sbjct: 124 LPAFDYLDPQENFT--SERYLHTHANYQLSADNLLDLSHFQYLHPETLGS 171
>gi|445425152|ref|ZP_21437231.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
gi|444753805|gb|ELW78443.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
WC-743]
Length = 358
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ + D++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACYPEDIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG +GK MP+ ++ K+ E+ G IW+WPGD+
Sbjct: 62 GNLVCGYHGLVMGCEGKTISMPAQRVNGFPCNKAYAAIEKFGFIWVWPGDQ--ALADESK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|377807933|ref|YP_004979125.1| vanillate monooxygenase [Burkholderia sp. YI23]
gi|357939130|gb|AET92687.1| vanillate monooxygenase [Burkholderia sp. YI23]
Length = 349
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 118/280 (42%), Gaps = 47/280 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+S ++ D++ + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNIWYAAAWSHEI-DESFATRELLGEPMLLYRKHDGTPVAMIDRCPHRFAPLSMGKRVG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHG + G C P R ++++ P + G++W+WPGD P A I
Sbjct: 63 DSVECGYHGLRFDCSGACTLNPHGDGRIPQAARVRTFPVVDLHGLVWLWPGD-PARADI- 120
Query: 331 CLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHT--------------- 370
L+P G + + M + L++DNL+DL+H + H
Sbjct: 121 GLIPDCGHLVSPRLKTIGDQMIHQAHYELVVDNLMDLSHVNYVHAPYQQVDDFLRAKHDV 180
Query: 371 ----STFAKGWSVP------SLVKFLTPASGLQGYWDPYPIDMEFRPP-CMVLSTIGISK 419
+T +VP S FL YW +++ + P C VL T G+
Sbjct: 181 VQTGATLESRRTVPSTRAPQSFRPFLADPDAPVEYW----LNIRWHAPGCCVLET-GVVP 235
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 459
G+ + THL P + TR +Y S ++
Sbjct: 236 IGEPRENGLVRIGTHL-----VTPITASSTRYVYASSRNY 270
>gi|172039308|ref|YP_001805809.1| putative Rieske 2Fe-2S family protein [Cyanothece sp. ATCC 51142]
gi|354552425|ref|ZP_08971733.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
gi|171700762|gb|ACB53743.1| putative rieske 2Fe-2S family protein [Cyanothece sp. ATCC 51142]
gi|353555747|gb|EHC25135.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
Length = 349
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 151/357 (42%), Gaps = 44/357 (12%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T L+N W+ DLK MV EP ++ R +DG ++N C HR PL G
Sbjct: 2 TTLLRNCWYVALPGKDLKPGKMVHKKMLGEPVLVGRHEDGEVFAMRNICPHRGIPLQYGW 61
Query: 271 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 319
+ + C YHGW++S+ DG C ++PS + +++ + PC E +G IW++
Sbjct: 62 MEGKDVCCCYHGWKFSSEDGHCREIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 320 ------PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P PP TIP S I I I+H ++ L+D AH P+ H+S +
Sbjct: 122 SKKELDPTTIPPVPTIPDFGKVSP-GISETIDFACHIDHAII--GLMDPAHGPYVHSSWW 178
Query: 374 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-QCA 432
+ VK + ++P P+ P M +S ++P K+ G +
Sbjct: 179 WRSGPRKFRVK--------EKQYEPVPLGFRLVPYEMPVS----ARPYKILGNKVSIEIV 226
Query: 433 THLHQLHV-CLPSSRKKTRLLYRMS-------LDFASVLKHVPFM---QYLWRHFAEQVL 481
L + L R LL ++ + F S+ +P+M + L + L
Sbjct: 227 FELPSVRTEILRGDRYSACLLTTITPIDETQCIAFQSIYWTIPWMGLFKPLLSLLTRKFL 286
Query: 482 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
+D +V+ QQE + + + + +RL ++ + A+ PF P++ R
Sbjct: 287 AQDRDVVIQQQEGLAYDPPLMLIDDADTQAKWYFRLKQEYQKAQAENRPFQNPVEPR 343
>gi|434388645|ref|YP_007099256.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019635|gb|AFY95729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 462
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 141/339 (41%), Gaps = 53/339 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNE-GR 275
W+PV + DL T PF + VI+ + C HR L G + E G
Sbjct: 26 WYPVFYIEDLDKLTPTPFTLLDRDLVIWWDTQASQWRAFDDRCPHRLARLSEGRIAEDGL 85
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQEGMIWIWPG-----D 322
++CPYHGW ++ +G C+++P QL + K +KSLP ++G+++I+ G +
Sbjct: 86 LECPYHGWAFTGNGTCDRIPQ-QLPDAKAETSRRACVKSLPTAVEQGLLFIYAGTPARAE 144
Query: 323 EPPTATIPCLL----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
+ P IP + P G+ + +LP + LL+N+LD +H P+TH + K S
Sbjct: 145 QTPIPLIPVPMVDGKPTDGWLV-LNTFRDLPYDALTLLENVLDPSHLPYTHHGSVGKR-S 202
Query: 379 VPSLVKFLTPAS---GLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGKLEGQNT 428
S V+ +S G G W P + F PC++ + +
Sbjct: 203 NASPVELEVTSSDKLGFTGTWADGPRKGTLGRQNTTFIAPCLMWHEL-----------TS 251
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLR 486
+Q + ++ P + + R+ R FAS + + + H + ED +
Sbjct: 252 KQFGETITVVYAT-PKRKGECRIFARFPFKFASKVPEFFIKATPEWYSHINNNAILEDDQ 310
Query: 487 LVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
+ L QER N + + LP D YR W
Sbjct: 311 IFLHHQERYLEQSGGSTNFSQSFYLPTKADAFVFEYRQW 349
>gi|395499683|ref|ZP_10431262.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. PAMC
25886]
Length = 333
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 16/165 (9%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
N W+PVA S L++ P C P V+FR + G + + C HR PL G V +
Sbjct: 5 NAWWPVALSHQLRN---APLACQLLGLPLVLFRDEGGRAAVLPDRCPHRFAPLSAGKVRD 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK---IKSLPCFEQEGMIWIWPGDE----PPT 326
G+I+CPYHGW ++ DG+C ++P T+ + S+ E G++W+ PG E PP
Sbjct: 62 GQIECPYHGWRFAADGRCTRVPGTEQAACNKPLLDSVQSCEAHGLVWVSPGPERPQTPPV 121
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
A P F I ++ L +N LD H F H
Sbjct: 122 APAPQQQNLDTFWITDQVQCSLQDA----AENFLDGFHTHFVHAG 162
>gi|148240601|ref|YP_001225988.1| putative dioxygenase [Synechococcus sp. WH 7803]
gi|147849140|emb|CAK24691.1| Putative dioxygenase [Synechococcus sp. WH 7803]
Length = 349
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+L W+ V S+ + ++ D + + I+R DG V + C H+ L G V
Sbjct: 2 QLTRSWYVVEHSSAVPAGSVRRLDFHGQAFAIWRALDGTLSVVSDRCPHKGASLSAGRVG 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIW-------- 319
E + CPYHGW + +DG C K+P+ R + SLPC E G IWIW
Sbjct: 62 EEGLACPYHGWCFQSDGHCAKIPAQDSAQAIPRRAQAFSLPCRESVGFIWIWWDPSAESS 121
Query: 320 PGDEPPTATIPCLLPPSGFEIHAEIVMELPIE---HGL-LLDNLLDLAHAPFTHTSTFA 374
D PP +P + P + +E +E H L +L+ +DL HAPF H+ +F
Sbjct: 122 AEDLPP---LPTVGPVPEDDDRGWRALEGSVEWNAHWLRVLEAFMDLTHAPFVHSGSFG 177
>gi|398868017|ref|ZP_10623445.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
gi|398234911|gb|EJN20768.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM78]
Length = 352
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIASKPLGRQICGEKI-VFYRGHEGRVAAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQDKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAEPQHKAASIVVDFITPETETSIWYFWGMARNFNP---HDEALTATIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLDMLEQQQKNLLANPERNLLKLNIDAGGVQSR 330
>gi|423095397|ref|ZP_17083193.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q2-87]
gi|397888921|gb|EJL05404.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q2-87]
Length = 361
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 131/338 (38%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAAKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R KS E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGADGKTVDMPGQRVRGFPCNKSFAVQERHGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P + + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HPLEWAENEEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ + G +W D P+D F PP VL +G++
Sbjct: 176 ETTVNGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G Q + P + + M+ F + + R
Sbjct: 236 HAGHGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQPQDE---ALTATIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|299770978|ref|YP_003733004.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
gi|298701066|gb|ADI91631.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter oleivorans DR1]
Length = 358
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ KS E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKSYAVVEKFGFIWIWPGEKALADETK-- 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + HAE + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHAEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|428169222|gb|EKX38158.1| hypothetical protein GUITHDRAFT_50255, partial [Guillardia theta
CCMP2712]
Length = 366
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 51/296 (17%)
Query: 218 WFPVAFSTDLKDDT---MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE- 273
W+PV+ + DLK D +V W + G C + C HR PL G +++
Sbjct: 5 WYPVSPAKDLKKDQPNQVVLLGLDLVVW--WHQPSGTWSCFADECPHRLAPLSEGRIDKN 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQ-EGMIWIWPGDEPPTA----- 327
G +QC YHGWE+S G CE++P + +K C G++WI+P + A
Sbjct: 63 GNLQCAYHGWEFSEKGSCERIPQDSMDTMKCDKKACATSYPGLLWIFPDTDRNLAMSKSP 122
Query: 328 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLVKF 385
IP P+ + + ++P L++NL+D +H PF H A+ P +
Sbjct: 123 KIIPQFDDPAFVDPTNFFMRDVPYGWDTLIENLVDPSHVPFAHHGLIEARDQGRPINLYV 182
Query: 386 LTPASGLQGYWDPYPIDME--------------FRPPCMVLSTIGISKPGKLEGQNTRQC 431
+ +G +GY DM+ FRPPC+ IS P K
Sbjct: 183 ESHEAGFEGY------DMDQNSTSRRCGIVSSKFRPPCL------ISDPEK--------N 222
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-VLKHVPFMQYLW-RHFAE-QVLNED 484
+T L C+P++ +RL+ R F + ++ ++ MQ W H ++ QV++ D
Sbjct: 223 STFLGLGTYCIPTAPGHSRLITRFPFRFPNQIVANIVRMQPRWMTHLSQNQVIDSD 278
>gi|380513012|ref|ZP_09856419.1| vanillate o-demethylase oxygenase subunit protein [Xanthomonas
sacchari NCPPB 4393]
Length = 358
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 125/317 (39%), Gaps = 52/317 (16%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ +A+ ++K ++P V++R +G +++ C HR PL +G +
Sbjct: 11 NAWYAIAWDHEVKH-ALLPRKVCNLDIVLYRTSNGRVAALEDACWHRLVPLSMGRLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG Y +G+C MPS N ++ P E+ +W+WPGD P L+
Sbjct: 70 VVCGYHGLVYDANGRCVHMPSQDTINPSACVRRFPTVERHRYVWVWPGD--AALADPALV 127
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------ 376
P G IH + ++ L+LDNL+DL H F H S+ +
Sbjct: 128 PDLHWNDDPAWAGDGRTIHVKC------DYRLVLDNLMDLTHETFVHGSSIGQDEVAEAP 181
Query: 377 --------------WSV-----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
W + P + A G +G D + I + F PC + +G+
Sbjct: 182 FDVVHGERSTVVSRWMLDIDPPPFWAWQIEHAHGYRGKVDRWQI-IRFEAPCTIAIDVGV 240
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
+ G Q R + + L+ P + + + + + H + R
Sbjct: 241 AVAGSGAPQGDRSRGVNGYVLNTITPETDRTCHYFWAFVRNHS---LHEQSITTRLRDGV 297
Query: 478 EQVLNEDLRLVLGQQER 494
V ED LVL Q+R
Sbjct: 298 TGVFGED-ELVLEAQQR 313
>gi|425453334|ref|ZP_18833092.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9807]
gi|389799951|emb|CCI20569.1| Similar to tr|Q6MI75|Q6MI75 [Microcystis aeruginosa PCC 9807]
Length = 349
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 155/359 (43%), Gaps = 54/359 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++FW+ + LK ++ EP V+ R +DG +++ C HR PLH G +
Sbjct: 5 LRDFWYVATPANKLKPGQLMAKKMLGEPIVVGRREDGEVFALRDICPHRGIPLHHGWIEG 64
Query: 274 GRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
+ C YHGW+++T DG C ++PS + + + S PC E +G IW++ +
Sbjct: 65 DGVYCCYHGWKFNTSDGVCSEIPSLTEHDRLDISRICVTSYPCREIQGHIWVFISADSKR 124
Query: 327 ATIPCLLPP----SGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
LPP S F +I I + I+H ++ L+D AH P+ HTS + +
Sbjct: 125 EINQENLPPVPTISDFGKLTPKIAETITFDCNIDHAVV--GLMDPAHGPYVHTSWWWRSG 182
Query: 378 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ 437
VK + ++P P+ P M +S +KP K+ G +
Sbjct: 183 PRKFRVK--------EKQYEPVPLGFRLAPYDMPVS----AKPYKILGNKVSI------E 224
Query: 438 LHVCLPSSRKKT-RLLYRMSLDFASV-----------------LKHVPFMQYLWRHFAEQ 479
+ LPS R + R ++ F ++ + + F+ L R+ Q
Sbjct: 225 IVFELPSVRTEILRGDRYLACAFTAITPIDENHCEVHQSLYYTIPWLAFLTPLLRYLTLQ 284
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
L +D +V+ QQE ++ + + + YRL ++ + A++ F+ P++ +
Sbjct: 285 FLKQDRDVVIKQQEGLSYHPALMLIDDADTQAKWYYRLKQEYEKSQAEKRDFVNPIKAQ 343
>gi|119504455|ref|ZP_01626534.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
gi|119459477|gb|EAW40573.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
Length = 364
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A+++++ D E+P VI++ + G+ + N C HR+ PL +G +
Sbjct: 9 LYNCWYAAAWTSEIDDGKPFSRTLLEKPIVIYKNESGVYVALDNRCCHRSAPLSMGRIEG 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGD--EPPTATI 329
++C YHG +Y G+C ++P N ++ S P ++ GM+WIW G+ + + I
Sbjct: 69 DCLRCMYHGMKYDPSGQCVEIPGQAKISSNHRVHSYPLVDRGGMLWIWMGEAHKANSDDI 128
Query: 330 PCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P P P + + L++DNL D +H F HTST
Sbjct: 129 PHFEPLDDPQWCGLPNRCYLHYDANWMLIVDNLADFSHLAFVHTSTLG 176
>gi|427731793|ref|YP_007078030.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427367712|gb|AFY50433.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 340
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 9/169 (5%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ +FW+ V S LK +T++ E IFRG+DG P +++ C HR+ L G+V
Sbjct: 2 QFADFWYIVTLSEQLKSNTVLARSLLGEWLAIFRGEDGQPVALRDRCLHRSSRLSAGNVC 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+G +QCPYHGW Y +GK +P+ + + + K+ EQ+G +++ + P
Sbjct: 62 QGALQCPYHGWVYDRNGKVIAVPAEGVDFQPSQQRQAKAYATKEQDGYVYVRLAENPSVD 121
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P +P +G+E ++ +N +D+ H F H F
Sbjct: 122 FAPFSMPHYGEAGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVF 169
>gi|422641743|ref|ZP_16705165.1| Rieske [2Fe-2S] region [Pseudomonas syringae Cit 7]
gi|440745647|ref|ZP_20924937.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
gi|330954129|gb|EGH54389.1| Rieske [2Fe-2S] region [Pseudomonas syringae Cit 7]
gi|440372280|gb|ELQ09088.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP39023]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R +D V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQDQQVIAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + R
Sbjct: 236 HAGKGGYHAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADAE---LTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLTHPHRSLLKLNIDAGGVQSR 330
>gi|126656429|ref|ZP_01727690.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
gi|126622115|gb|EAZ92822.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
Length = 466
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 135/341 (39%), Gaps = 30/341 (8%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAH 261
+ G P K W+PV + DL F E+ VI+ K CV + C H
Sbjct: 15 IIGGNDPDQFDWKEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDKKNSQWCVFDDQCPH 74
Query: 262 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQE 313
R PL G +NE G ++CPYHGW +S G CE +P + Q + + +
Sbjct: 75 RLAPLSEGRINESGCLECPYHGWAFSGQGNCEVIPQQKPEGNAEQSPRASVNTYSTKVAQ 134
Query: 314 GMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFT 368
G+++++ G A P L E E V ++P + L++N+LD +H P+T
Sbjct: 135 GLLFVYAGKTENAAKTPIPLVDVLEESSREWVCLNTFRDIPYDALTLMENVLDSSHIPYT 194
Query: 369 HTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
H + +V P ++ + G +G W+ P R + T PG +
Sbjct: 195 HHKSVGNRSNVSPVDLEVVESGKWGFKGVWEEGP-----RKGTLGKQTTHFFAPGMMYHD 249
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNED 484
T + + P S+ K RL R F S + + + H + + ED
Sbjct: 250 LTSKQFGRTLTVVYATPISKGKCRLFARFPFKFCSPIPKFFINLTPRWYSHIGQNGVLED 309
Query: 485 LRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
++ L QER +N + + LP D + W
Sbjct: 310 DQIFLHYQERYLEKKGGSSNVSKAFYLPTKADLFVFQLHSW 350
>gi|3915234|sp|O05616.1|VANA_PSEUH RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|1946284|emb|CAA72287.1| a-subunit oxygenase [Pseudomonas sp.]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 103/239 (43%), Gaps = 34/239 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E +GK MP +++ IKS E+ G IW+WPGD P L+
Sbjct: 63 KLICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGDR--ELADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK---- 384
+ + E + + ++ L++DNL+DL H + H S+ + + V
Sbjct: 121 HHLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVSTRVE 180
Query: 385 -----------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
F A G D P+D F PP VL +G++ GK
Sbjct: 181 GDTVITSRYMDNVMAPPFWRAALRGNGLADDVPVDRWQICRFAPPSHVLIEVGVAHAGK 239
>gi|341614839|ref|ZP_08701708.1| vanillate monooxygenase [Citromicrobium sp. JLT1363]
Length = 329
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 48/319 (15%)
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL 299
EP ++ R +DG + + C HR PL LG + CPYHG + T GKC + P +
Sbjct: 20 EPVLLMRKEDGTAVAMVDRCPHRYAPLSLGEREGDCVTCPYHGLTFDTSGKCVRNPFSDK 79
Query: 300 --RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF--EIHAEIVMELPIE--HG 353
+++ P E++ ++W WPGD P A + S + HA I +P++ +
Sbjct: 80 IPAGASLRTFPVVERDHIVWFWPGD-PARADEDAIPDFSAIVRDGHAPITGLMPMDANYE 138
Query: 354 LLLDNLLDLAHAPFTHTSTFA--------------------KGWSVPSLVKFLTPASGLQ 393
DNL+DL+H F H +FA W +P + PA
Sbjct: 139 YGTDNLMDLSHIEFVHKGSFAGRGVIFAGEHEVKVEGEQLHSNWWMPGIP---APAHTF- 194
Query: 394 GYWDPYPI-----DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKK 448
G +DP I DM + P + +G G GQ R+ HQ H+ P +
Sbjct: 195 GIYDPEMITDHWLDMRWDAPASMYLQVGACPEG---GQ--REEGVIAHQAHILTPETETT 249
Query: 449 TRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN---LP 505
+ + + A ++ + L Q E+ + ++ +GA W+ +
Sbjct: 250 SHYFWATTRHGAPSVEGDAMLAGL----MGQAFGEEDKPIIEAAYANTDGAGFWDRKPVS 305
Query: 506 VGYDKLGVRYRLWRDALEK 524
+G D G R R + L+K
Sbjct: 306 LGIDTGGTRARRMIEKLKK 324
>gi|399010468|ref|ZP_10712841.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
gi|398107191|gb|EJL97198.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM17]
Length = 351
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 130/336 (38%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGLEGRVAALEDFCPHRGAPLSLGYVESG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------------- 374
+ + E + + ++ L++DNL+DL H + H S+
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPTTRVE 180
Query: 375 ----------KGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
+ P + +GL D P+D F PP VL +G++
Sbjct: 181 GDEVVTARHMQNIMAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G+ Q + P S + M+ +F + R ++
Sbjct: 238 GQGGYNAPAQSKASSIVVDFITPQSDTSIWYFWGMARNFN---PQDEALTASIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FSEDLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|294667229|ref|ZP_06732450.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292603010|gb|EFF46440.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 358
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 48/315 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDMVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 374
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFE 183
Query: 375 -----KGWSVPSLVKFLTP----------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
+ V ++ + P G G D + I + F P + +G++
Sbjct: 184 VVHGDRSVIVSRWMRNIEPPPFWASQMALHRGYHGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R + + L+ P + + + ++A H M R+
Sbjct: 243 TGTGAPEGDRSQGVNAYVLNTVTPETDRTCHYFWAFMRNYA---LHDQSMTTTTRNAIAG 299
Query: 480 VLNEDLRLVLGQQER 494
+ ED +VL Q+R
Sbjct: 300 IFGED-EVVLEAQQR 313
>gi|90415583|ref|ZP_01223517.1| Rieske (2Fe-2S) region protein [gamma proteobacterium HTCC2207]
gi|90332906|gb|EAS48076.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2207]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+ A S ++ D + EP V+FR +DG G +++ C HRA PL LG+V+E
Sbjct: 21 DMWYVAALSAEVSDKPLAR-TLLNEPVVLFRTQDGQIGALEDRCCHRALPLSLGTVDESG 79
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++C YHG ++ G C ++P + K+ + E+ +IWIW G E + P
Sbjct: 80 LRCGYHGLLFNCAGACIEIPGQEKIPSKAKVTAYHAIEKGPLIWIWFGSELDSE--PSCE 137
Query: 334 PPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PP + +H + V + L+ DNLLDL+H + H +T
Sbjct: 138 PPE-YSVHTDKRYLFDGDVYHYEAPYQLIHDNLLDLSHLGYVHANTIG 184
>gi|124266194|ref|YP_001020198.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258969|gb|ABM93963.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 349
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A ST++ + + +I+R +DG + + C HR PLHLG
Sbjct: 8 LTNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQL-RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 329
+ C YH ++ G+C K P + Q+ + K++S P E+ G +WIW G D P A +
Sbjct: 68 DEVACLYHALQFDCTGQCTKNPHGNGQIPKAAKVRSFPLEERYGFLWIWMGEDAPDLARL 127
Query: 330 PCL-----LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P P +G A M + + L++DN++DL+H H + LV
Sbjct: 128 PDFGELDKGPDTGV---AFTYMHMKANYELIIDNVMDLSHIDHVHGEIITTRGQLSPLVP 184
Query: 385 FL---------------TPASGLQGYWDPYP-------IDMEFRPPCMVLSTIGISKPGK 422
+ TPA + + P P D+ + PP + ++G ++ G
Sbjct: 185 QMREGEQAISARWEWQQTPAMLIFANFLPEPAAGARHFFDITWTPPANIQLSVGATQDG- 243
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
G + LH C P + T +
Sbjct: 244 --GALDLAGCIGQYDLHTCTPETANTTHYWF 272
>gi|218246485|ref|YP_002371856.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166963|gb|ACK65700.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 370
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 152/353 (43%), Gaps = 32/353 (9%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P ++ L+N W+ LK M EP ++ R +DG +++ C HR PL
Sbjct: 21 PMSSLLRNAWYVALPGKQLKPGKMTHKKMLGEPVLVGRREDGEVFAMRDICPHRGIPLQY 80
Query: 269 GSVNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-- 319
G + + C YHGW+++T DG+C ++PS + +++ + PC E +G IW++
Sbjct: 81 GWLEGDGVCCCYHGWKFNTSDGRCSEIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFA 140
Query: 320 --------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
P + PP TIP + P I I I+H ++ L+D AH P+ H
Sbjct: 141 EDSKKEINPSELPPVPTIPDFGKVEPG---ISETIHFACHIDHAII--GLMDPAHGPYVH 195
Query: 370 TSTFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
+S + + VK QG+ PY + + RP ++ + + I E +
Sbjct: 196 SSWWWRSGPRKFRVKEKQYEPVAQGFRLVPYDMPVSARPYKILGNQVSIEI--VFELPSV 253
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDL 485
R + CL ++ T + F S+ +P+M + L Q L +D
Sbjct: 254 RTEILRGDRYSACLLTT--ITPIDENECEAFQSIYWTIPWMGLFKPLLSLLTRQFLAQDR 311
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
+V+ QQE + + + + +RL ++ + A+ PF P++ R
Sbjct: 312 DVVIQQQEGLKYNPALMLIDDADTQAKWYFRLKQEYQKSQAENRPFKNPVEPR 364
>gi|397615617|gb|EJK63540.1| hypothetical protein THAOC_15793 [Thalassiosira oceanica]
Length = 883
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 17/173 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 272
+ W+ VA+ +K+ + + EP V++R DG C ++ C HR+ PL +G +N
Sbjct: 392 FNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDVCPHRSAPLSMGKIND 451
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----------IKSLPCFEQEGMIWIWPG 321
EG+++C YHGW + DG E +P TQ+R+ +K+ E EG+IWIW G
Sbjct: 452 EGQLECMYHGWGFGKDGNIESIP-TQIRDGGSSKRSPPKRSCLKTYCVEEHEGLIWIWRG 510
Query: 322 D--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
+ E + +P S + I + V++ ++ +++N LD H + H +
Sbjct: 511 ELLEADASKLPKTRDVSTYPI--DTVLDYNVDWQYIVENNLDSPHLFWLHNGS 561
>gi|422595142|ref|ZP_16669431.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
gi|330985448|gb|EGH83551.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M301315]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|443478861|ref|ZP_21068556.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
gi|443015788|gb|ELS30604.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
Length = 329
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
++ K FW+PV + L ++ F + V++ +G P + C HR+ L LGS
Sbjct: 6 HSLFKRFWYPVIPMSLLAEEQPKSFQLLGQKIVLWIDAEGKPAAALDRCCHRSAHLSLGS 65
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGD--- 322
V +G I C YHGW+Y G C +P +N +I + C E+ G +W+ GD
Sbjct: 66 VKQGAIACAYHGWQYDRSGSCLHVPQLPTDTPIPKNYRIHTFACEERYGYVWVCMGDPIN 125
Query: 323 ---EPPTATIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
E P A+ P L P +E+ + +++N +DLAH F HT+TF
Sbjct: 126 KIAEIPEASDPQFRLIPEFYEVWNCAGLR-------VMENEMDLAHPTFVHTTTFGSA 176
>gi|220919762|ref|YP_002495065.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219952182|gb|ACL62573.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 448
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT-MVPFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ SGP P T ++ +W P A +L+ + +VP E +V+FR + G G + C
Sbjct: 10 ITRSGPGTPLGTLMRRYWQPAALVDELQGERPVVPVQLLGEKFVLFRDEAGRYGLLDRDC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEG 314
HR L G + G ++C +HGW + +G+C + P+ + RN++ ++ P E+ G
Sbjct: 70 PHRGADLAFGRLEHGGLRCAFHGWLFDVEGRCLETPAEPVGSKLCRNIRQRAYPVVERSG 129
Query: 315 MIWIWPGD-EPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+++ + G+ EPP + C L P+ + + + E L + +D AHA F H
Sbjct: 130 ILFAYLGEGEPPAFPELDCFLAPNAYTFAFKGLFECNWLQALEVG--IDPAHASFLH 184
>gi|338530424|ref|YP_004663758.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337256520|gb|AEI62680.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 357
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
RL N WF + S +L D + P V+FRG+ G P + + C HR PL LG V
Sbjct: 14 VRLPNAWFILCASNELGDKPLA-RTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRV 72
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPP 325
EG++QC YHGW + +G+C +P R + EQ+G +W++ PG EP
Sbjct: 73 KEGQLQCGYHGWRFDGEGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPT 132
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
T L + ++ P L+N LD+ H + H F
Sbjct: 133 TEPYRFPLLEAREYTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLF 180
>gi|422607380|ref|ZP_16679380.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. mori str. 301020]
gi|330891022|gb|EGH23683.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. mori str. 301020]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTTTIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|325916823|ref|ZP_08179074.1| vanillate demethylase subunit A [Xanthomonas vesicatoria ATCC
35937]
gi|325536974|gb|EGD08719.1| vanillate demethylase subunit A [Xanthomonas vesicatoria ATCC
35937]
Length = 387
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 40 NAWYAVAWDHEIKH-ALTPRKVCNLEVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 98
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS + N ++S P E+ +WIWPGD + TA IP
Sbjct: 99 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRSFPVAEKHRYVWIWPGDPAKADTALIPD 158
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G I+A+ ++ L+LDNL+DL H F H S+ +
Sbjct: 159 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 203
>gi|378950713|ref|YP_005208201.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas fluorescens F113]
gi|359760727|gb|AEV62806.1| putative vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas fluorescens F113]
Length = 361
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 40/242 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEP---PTATIP 330
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVQERHGFIWVWPGDQALADPALIHH 122
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAESDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D P+D F PP VL +G++
Sbjct: 178 TVEGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GK 422
G
Sbjct: 238 GN 239
>gi|257484173|ref|ZP_05638214.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|422678907|ref|ZP_16737181.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
gi|331008254|gb|EGH88311.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. tabaci str. ATCC 11528]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERTSTAEQIPVM 351
>gi|237797303|ref|ZP_04585764.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020153|gb|EGI00210.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVTDKPLGRQICNEKMAFYRDQNQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG +DGK MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 QLVCGYHGLVMGSDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDK--EKADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYEAPQEFKASSIVVDFITPETDTSIWYFWGMARNFNPADES---LTATIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|289626695|ref|ZP_06459649.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. NCPPB 3681]
gi|289646261|ref|ZP_06477604.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 2250]
gi|422581971|ref|ZP_16657111.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
gi|330866818|gb|EGH01527.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. aesculi str. 0893_23]
Length = 354
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTSAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PSLI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|383788948|ref|YP_005473517.1| putative oxidoreductase [Caldisericum exile AZM16c01]
gi|381364585|dbj|BAL81414.1| putative oxidoreductase [Caldisericum exile AZM16c01]
Length = 322
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 82/169 (48%), Gaps = 8/169 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ V S +LKD + F E V++R KDGI C+ + CAHR L G +
Sbjct: 2 IKNQWYIVLSSKELKDKP-IGLKRFGEKLVMWRTKDGI-ACIADKCAHRGASLSKGKIVN 59
Query: 274 GRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT-A 327
IQCP+HG+EY + G+ +P S N K+KS E+ G I+++ GDE
Sbjct: 60 NHIQCPFHGFEYDSSGRVVLIPANGKASKVPDNFKVKSYKVKEKNGFIFLFYGDESKAPG 119
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
IP G + E+ + ++N LD H PF H +T G
Sbjct: 120 EIPFFDWIDGSFTYDELNEPWNTHYSRCIENQLDPIHLPFVHHNTIGIG 168
>gi|325929238|ref|ZP_08190374.1| vanillate demethylase subunit A [Xanthomonas perforans 91-118]
gi|325540377|gb|EGD11983.1| vanillate demethylase subunit A [Xanthomonas perforans 91-118]
Length = 358
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 47/317 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGTVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 374
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 375 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 419
+G V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVIVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R + + L+ P + + ++A H + L R
Sbjct: 243 AGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRDGVTG 299
Query: 480 VLNEDLRLVLGQQERMN 496
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|312960197|ref|ZP_07774708.1| vanillate demethylase A [Pseudomonas fluorescens WH6]
gi|311285419|gb|EFQ63989.1| vanillate demethylase A [Pseudomonas fluorescens WH6]
Length = 346
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 135/333 (40%), Gaps = 37/333 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAHKPLGRQICGEK-MVFYRGLEGAVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--AQADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVKF- 385
+ + E + ++ ++ L++DNL+DL H + H S+ + P L
Sbjct: 121 HHLEWAVSDEWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPLTTVD 180
Query: 386 ---LTPASGLQG-----YW----------DPYPID----MEFRPPCMVLSTIGISKPGKL 423
+ A ++ +W D P+D F PP VL +G++ GK
Sbjct: 181 GDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKG 240
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 483
+ + P + + M+ +F H + R ++ +E
Sbjct: 241 GYHAAPEYKAASIVVDFITPQTDTSIWYFWGMARNFNP---HDEALTASIREGQGKIFSE 297
Query: 484 DLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
DL ++ QQ+ + L + D GV+ R
Sbjct: 298 DLEMLERQQQNLLAHPTRNLLKLNIDAGGVQSR 330
>gi|359464344|ref|ZP_09252907.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 481
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 141/340 (41%), Gaps = 30/340 (8%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRA 263
G P ++ W P+A+ DL + F E+ VI+ + V + C HR
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPYQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 264 CPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPST-------QLRNVKIKSLPCFEQEGM 315
PL G + +G ++CPYHGW +S G+C ++P Q R ++SLP ++GM
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 316 IWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTHT 370
++++PG A IP L+ P + IV+ +LP + LL+N+LD +H PF H
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEEAPNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFAHH 211
Query: 371 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 430
+ SV + S QG+ + + + P + T Q
Sbjct: 212 RSVGDR-SVAGPMDLEINHSDRQGFQGIWKTAVGPKKGQFGTQLTTFIAPNLIWHDLTTQ 270
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVLNEDL 485
+ C P + + RL R FAS ++++ P + H + + ED
Sbjct: 271 EKNRTLTVAYCTPIRKGECRLFARFPFQFASPWPAGLIRYTPSWVF---HLLQNSILEDD 327
Query: 486 RLVLGQQER----MNNG---ANVWNLPVGYDKLGVRYRLW 518
++ L QER G A + +P D+ V W
Sbjct: 328 QIFLYLQERHLAQQRQGMPIAQAFYMPTQADRFVVALHQW 367
>gi|295698951|ref|YP_003606844.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438164|gb|ADG17333.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 366
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C EP V +R +G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACMPDEVADKPLGRQIC-GEPMVFYRNAEGAVVALEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCL- 332
+ C YHG E GK MP ++ I+S P E+ G +W+WPGD
Sbjct: 63 TLVCGYHGLEMGCQGKATGMPGQRVNGFPSIRSFPVIERYGFVWVWPGDAAKADAAKLHH 122
Query: 333 --LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
S + + + ++ L++DNL+DL H + H
Sbjct: 123 LEWAESAEWAYGGGLYHIRCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTVAEGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPG 421
TS F + + P K +GL D P+D F PP VL +G++ G
Sbjct: 183 TVRTSRFMENVAAPPFWKMALRGNGLA---DDVPVDRWQICHFTPPSHVLIEVGVAHAG 238
>gi|126654793|ref|ZP_01726327.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
gi|126623528|gb|EAZ94232.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
Length = 443
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 142/338 (42%), Gaps = 45/338 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNEG-- 274
W+P+ D+ ++ P VI++ + V + C HR PL G ++E
Sbjct: 11 WYPLIPIEDIDSNSPTPVTLLGLRLVIWKPRSSTYYQVFLDQCPHRLAPLSEGRIDENSD 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------SLPCFEQEGMIWIWP------ 320
+ C YHGWE+ +G C +P T+ + K S P + G++W+WP
Sbjct: 71 NLMCSYHGWEFDQNGICTSIPQTENTKILTKNKQQFACVSFPSRQINGLLWVWPDKNSQD 130
Query: 321 -GDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 376
++ P P + GF I + V ++ + L++N+ D +H P+ H G
Sbjct: 131 LANKTPLPLSPQIDADKGF-IWSSYVRDMAYDWQTLVENVADPSHVPYAHHGVQGNRNNG 189
Query: 377 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLH 436
+P + TP + F PPC + I I G + +Q ++
Sbjct: 190 QPIPIEIVKSTPNVIEAKIERALNSTITFEPPCRLEYAIKI-------GDSNKQVGLVVY 242
Query: 437 QLHVCLPSSRKKTRLLYRMSLDFA-SVLKHVPFMQYLWRHFAEQ--VLNEDLRLV----- 488
C+P + K+RL+ + +FA S++K +P W H + VL D+ L+
Sbjct: 243 ----CVPVAPGKSRLVGQFPRNFAKSLMKIIP---RWWEHLTTRHLVLEGDMILLQQQEY 295
Query: 489 -LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
L +++ + + LP D+L + +R W D +G
Sbjct: 296 YLQEKQETQSWKTAYQLPTEADRLVIEFRRWFDTYCQG 333
>gi|71735530|ref|YP_274672.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|71556083|gb|AAZ35294.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. phaseolicola 1448A]
Length = 354
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHALHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|197106601|ref|YP_002131978.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
gi|196480021|gb|ACG79549.1| putative phenylpropionate dioxygenase [Phenylobacterium zucineum
HLK1]
Length = 362
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 25/175 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VN 272
L + W+ A S+DLK ++ EP ++ RG G +++ C HRA PL G V
Sbjct: 20 LTDIWYFAALSSDLKPGRPARYEILGEPVMLGRGPSGQLFALRDICPHRAAPLSAGRIVR 79
Query: 273 EGR---IQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPG-- 321
+G+ ++CPYHGW++ DG C +PS + ++++ P E +G++++W G
Sbjct: 80 DGQGEAVECPYHGWKFGADGGCTAIPSLTADQAMDIGRIRVRRYPVAESQGLVFVWIGRD 139
Query: 322 -----DEPPTATIPCLL--PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
D+PP P ++ PP ++ +V + I+H ++ L+D AH P+ H
Sbjct: 140 AASEPDQPPP-VFPGVVGGPP---KLVDRMVFDAHIDHAVV--GLMDPAHGPYVH 188
>gi|116075488|ref|ZP_01472748.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
gi|116067685|gb|EAU73439.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
Length = 436
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 21/175 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG-IPGCVQNTCAHRACPLHLGSVNE-GR 275
W+PVA+ DL F E VI+ + + C HR PL G +NE G
Sbjct: 9 WWPVAYVRDLDQSKPTRFTLLERDLVIWWDPSAALWRAFPDVCPHRLVPLSEGRINERGE 68
Query: 276 IQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
++CPYHGW + +G+C+ +P S LR+ + SLP +G++++W G P A
Sbjct: 69 LECPYHGWSFDGEGRCQHIPQAEEGTRSDSLRS-RCDSLPSATAQGLLFVWTG--APEAA 125
Query: 329 IPCLLP--------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P LP P + + + +LP++ LL+N+LD++H PFTH T +
Sbjct: 126 DPDSLPLVPQLQDNPESWTVQ-DTFRDLPMDALTLLENVLDVSHVPFTHHRTVGR 179
>gi|78045933|ref|YP_362108.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|78034363|emb|CAJ22008.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 358
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 130/317 (41%), Gaps = 47/317 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 374
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 375 -----KGWSVPSLVKFLTP----ASGL------QGYWDPYPIDMEFRPPCMVLSTIGISK 419
+G V ++ + P AS + +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVIVSRWMRNIDPPPFWASQIARHLDYRGKVDRWQI-IRFEAPSTIAIDVGVAI 242
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R + + L+ P + + ++A H + L R
Sbjct: 243 AGTGAPEGDRSQGVNGYVLNTITPETDTTCHYFWAFMRNYA---LHDQSLTTLTRDGVTG 299
Query: 480 VLNEDLRLVLGQQERMN 496
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|420251385|ref|ZP_14754562.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398057977|gb|EJL49901.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 349
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 132/321 (41%), Gaps = 51/321 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+S D+ D + + EP +++R DG P + + C HR PL +G
Sbjct: 4 LRNTWYAAAWSRDVGAD-LSTRELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT-- 328
I+C YHG ++ G C K P R +++S P ++ G++WIW G EP A
Sbjct: 63 DGIECGYHGLQFDCSGACSKNPHGDGRIPPGARVRSFPAEDRHGLVWIWAG-EPSRANAS 121
Query: 329 -IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLA-----HAPFTHTSTFAK---- 375
IP L+ P + E+ + E L++DNL+DL+ HAP+ F +
Sbjct: 122 LIPDFSHLVSPRLKTVGDEMTQKAHYE--LVVDNLMDLSHVNYLHAPYQQVDDFLQAKHD 179
Query: 376 ---------------GWSVP-SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
G P S FL YW +++ + P L G+
Sbjct: 180 VVQDGSALESRRTVTGTRAPQSFRPFLDDPDAPVDYW----LNIRWHAPGCCLLETGVVP 235
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMS----LDFASVLKHVPFMQYLWRH 475
G+ + T H+ P T+ LY S LD Q + H
Sbjct: 236 VGRPREHGLVRIGT-----HIVTPIGAASTQYLYASSRNYRLDDPDADDETARWQQMGFH 290
Query: 476 FAEQVLNEDLRLVLGQQERMN 496
++ + E ++ +G++E ++
Sbjct: 291 EQDKPMIEGVQTRMGERELLS 311
>gi|402702325|ref|ZP_10850304.1| oxidoreductase subunit alpha [Pseudomonas fragi A22]
Length = 352
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 138/341 (40%), Gaps = 53/341 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +R ++ V++ C HR PL LG V+ G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEKI-VFYRAQENRVAAVEDFCPHRGAPLSLGYVDNG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAAVERYGFIWVWPGDQ--DLADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEVAP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ ++G +W D +D F PP VL +G++
Sbjct: 176 TTTVEGHEVVTARHMENIMPPPFWRMALRGNNLADDVLVDRWQICRFSPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F P Q L E
Sbjct: 236 HAGKGGYHAAPEFKASSIVVDFITPETETSIWYFWGMARNFN------PQDQALTDTIRE 289
Query: 479 ---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
Q+ +EDL ++ QQ+ + + + L + D GV+ R
Sbjct: 290 GQGQIFSEDLEMLERQQQNLLDHPHRALLKLNIDSGGVQSR 330
>gi|148553989|ref|YP_001261571.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499179|gb|ABQ67433.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 359
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 12/171 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ VA ++ +V ++RG G+ + + C HR PL LG+V
Sbjct: 3 LFNAWYIVAEPDEVAGGGIVARTLLGRRVAVYRGASGVLVGLDDFCPHRLAPLSLGTVVG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHG E+ DG C ++P + ++++ P E+ G IWIW GD A
Sbjct: 63 DGIRCAYHGAEFGADGICVRVPGQKAVPPRARVRTYPVVERHGYIWIWMGDPAGAADESS 122
Query: 332 LLPPSGFEIHAE--------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ P GF + + + + ++ L+ DNL D+ HA F H +F
Sbjct: 123 I--PEGFWVSGDPAWIGGYGHIESIRSDYRLINDNLFDITHAEFVHPESFG 171
>gi|294627570|ref|ZP_06706153.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598201|gb|EFF42355.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 358
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 48/315 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 374
L G IHA+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFE 183
Query: 375 -----KGWSVPSLVKFLTP----------ASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
+ V ++ + P G G D + I + F P + +G++
Sbjct: 184 VVHGDRSVIVSRWMRNIEPPPFWASQMALHRGYHGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R + + L+ P + + + ++A H M R+
Sbjct: 243 TGTGAPEGDRSQGVNAYVLNTVTPETDRTCHYFWAFMRNYA---LHDQSMTTTTRNAIAG 299
Query: 480 VLNEDLRLVLGQQER 494
+ ED +VL Q+R
Sbjct: 300 IFGED-EVVLEAQQR 313
>gi|254414106|ref|ZP_05027874.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179242|gb|EDX74238.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 357
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 17/175 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
LKNFW+ FS+ + T P + +V++R DG +++ C HR L LG V
Sbjct: 2 LKNFWYVCEFSSAV---TQKPKQILMLNQRFVLYRNSDGQVVALKDQCPHRGAALSLGWV 58
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD---- 322
+G ++CPYHGW++ DGKC +P+ + ++ S E+ G++W++ GD
Sbjct: 59 EDGCLRCPYHGWKFQADGKCIDIPANAPEIPIPKKARVDSYLVQEKYGLVWLFYGDLPPE 118
Query: 323 -EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP +P P I A++ ++ + +++N LDLAH H ++ G
Sbjct: 119 KRPPIPYLPEFTDPKMRSIVADV--KVNNHYTRVIENALDLAHVYIVHGNSVGAG 171
>gi|444916129|ref|ZP_21236252.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
gi|444712629|gb|ELW53546.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
Length = 340
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 144/348 (41%), Gaps = 49/348 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN- 272
+ W PVA S +++ + E V+FR G +++ C HR L LG V
Sbjct: 14 MAEVWTPVAMSREVRGKPLG-LTLAGERIVLFRDGRGTLSALRDQCPHRGVKLSLGKVGA 72
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-----IKSLPCFEQEGMIWIW--PGDEPP 325
+G ++CP+HGW +S G C +P L K + + P E+ G+IW++ PG E P
Sbjct: 73 DGCLECPFHGWRFSASGSCTHIPLNALPEEKRQRYAVTAFPVRERGGLIWLYTRPGGEAP 132
Query: 326 TAT-IPCLLPPSGFEIHAEIVMELPIEH-GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 383
+P L G +H E H ++N+LD H PF H T +G L
Sbjct: 133 DEPYVPESLEKPG--VHVGFYAETWNAHWTRAMENMLDSPHLPFVHQRTIGRG-----LR 185
Query: 384 KFLTPASGLQGYWDPYPI------DMEFRPPCMVLS-------TIGISKPGKLEGQNTRQ 430
+ + P S ++ +P M+ PP L + I PG+
Sbjct: 186 RRMKPESTMEVEVEPTSTGFRTWSSMDGVPPQGSLDWLRPNGMRLNIPIPGR-------- 237
Query: 431 CATHLHQLHV-CLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
L QLH+ C+P TR+L + DF ++ P + R + ++L+ED R ++
Sbjct: 238 ----LMQLHMWCIPVDANHTRMLLAAARDF---VRMQPLAALVDR-YNTRILHED-RAIV 288
Query: 490 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQT 537
+ V D+ + +R W +K A + +P T
Sbjct: 289 ESSHPVEAPPVSEERSVATDRATLAFRRWYHERKKQATRTAADEPAAT 336
>gi|416016890|ref|ZP_11564127.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|416026994|ref|ZP_11570325.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|416028121|ref|ZP_11571221.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320324098|gb|EFW80180.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. B076]
gi|320327819|gb|EFW83826.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
gi|320328655|gb|EFW84655.1| vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. glycinea str. race 4]
Length = 354
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 141/359 (39%), Gaps = 52/359 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ +++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTAAMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEQ---LTATIREGQR 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
++ +EDL ++ QQ+ + L + D GV+ R + L A+Q+P M
Sbjct: 293 KIFSEDLEMLERQQQNLLQHPQRNLLKLNIDAGGVQSRKILERLIAAERASTAEQIPVM 351
>gi|320108711|ref|YP_004184301.1| Rieske (2Fe-2S) domain-containing protein [Terriglobus saanensis
SP1PR4]
gi|319927232|gb|ADV84307.1| Rieske (2Fe-2S) iron-sulfur domain protein [Terriglobus saanensis
SP1PR4]
Length = 365
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 132/304 (43%), Gaps = 46/304 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
L FW+PVAFS+++ D P+ +E V++R DG ++ C HR PL LG V
Sbjct: 43 LAPFWYPVAFSSEVTDK---PYGARLLDERVVVYRLSDGSLAAAKDICYHRGAPLSLGHV 99
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPTA 327
I C YHG Y+ +G+C +P+ + ++ + P E G++W+ E A
Sbjct: 100 EGDEIICKYHGLRYNAEGRCTCIPAHPKGAISPRLRLHTFPVREAFGLVWVRLV-ERGEA 158
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSL 382
+P + PS ++ + V + G ++ LD++H F H TF KG + VP
Sbjct: 159 LLPEMKEWDDPSYLQVLPDSVT-MKASAGRQMEGFLDVSHFAFVHLETFGKGENPEVPDY 217
Query: 383 VKFLTPASGLQGYWDP---YPIDME-FRPPCMV-----------LSTIGISKPGKLEGQN 427
TP + Y+ Y + + PP + + + + PG +GQ
Sbjct: 218 TVEQTPQGFVADYYSTVSNYSVGYKHLNPPGFLWRRRFEVFTPFTAKLTVFFPG--DGQ- 274
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
LH L+V P S +KTRL + +F + P L F QV ED +
Sbjct: 275 -------LHILNVASPVSARKTRLFVPICRNFD---RDAPLQATL--DFNHQVFAEDQAI 322
Query: 488 VLGQ 491
V Q
Sbjct: 323 VEQQ 326
>gi|424072288|ref|ZP_17809709.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
gi|407997942|gb|EKG38371.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe037]
Length = 354
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ + ++ D M C E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTADEVADKPMGRQIC-NEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|262197943|ref|YP_003269152.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262081290|gb|ACY17259.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 367
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 6/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN+W+ + +L + EE V++R DG + + C HR PL G + +
Sbjct: 25 LKNYWYVACLAEELGRKKPLARTIMEERLVLWRDADGRAVAMLDRCLHRNAPLSEGDLFD 84
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATI 329
G I CPYHGW Y DG C +PS ++I++ P E++G++W+W G +
Sbjct: 85 GCIGCPYHGWTYDRDGACVNVPSAGPEGAPVALRIETFPVRERDGLVWVWMGGDVAPERE 144
Query: 330 PCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFTHTSTF 373
P +P M ++ + L++N +D+ H F H F
Sbjct: 145 PFAMPFYDTPGWRRYYMVTAFDNDVTSLVENFMDVPHTVFVHRGWF 190
>gi|72382058|ref|YP_291413.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL2A]
gi|72001908|gb|AAZ57710.1| rieske 2Fe-2S family protein [Prochlorococcus marinus str. NATL2A]
Length = 444
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ V+ S +K+ + F + EP V++R ++GI CV++ C HR G V G++
Sbjct: 51 WYSVSSSESIKEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLV 110
Query: 278 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 325
CPYHG +S+ G C + + +++K+ PC E+EG I+I+ P
Sbjct: 111 CPYHGARFSSQGSCTNLDRITCQHIIDSNYDSYAKSIKLFQYPCVEKEGYIYIYYTGTPL 170
Query: 326 T--------ATIPCLLPPS-GFEI----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
++I LLP S GF + E+ ++ + +++N LD+ H + H T
Sbjct: 171 ANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDT 230
>gi|428777231|ref|YP_007169018.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691510|gb|AFZ44804.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 340
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 16/197 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA S+++ D +++P V++R DG +++ C HR L G + R
Sbjct: 13 NHWYVVARSSEVTTDPYA-VTLWKQPIVLYRQSDGQVCALEDRCPHRFVRLSEGKLQRDR 71
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHGW+++ +GKC +P +L +++ P E +G IW++ GDE TAT+P
Sbjct: 72 VECAYHGWQFNAEGKCVSIPYLTEKQKLPPCQLRVYPVQEGDGFIWVFLGDE--TATVPR 129
Query: 332 LLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P I V+E + L++NL+D+ H H + W+ L
Sbjct: 130 FQVPEWDHLNYIATVSVIETQAHYSYLIENLMDMYHG---HLHEDWQAWTDAKLENIEED 186
Query: 389 ASGLQGYWDP---YPID 402
S + GY++ Y ID
Sbjct: 187 DSQVHGYYNAQSYYRID 203
>gi|124025557|ref|YP_001014673.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL1A]
gi|123960625|gb|ABM75408.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. NATL1A]
Length = 444
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 25/180 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ V+ S +K+ + F + EP V++R ++GI CV++ C HR G V G++
Sbjct: 51 WYSVSSSESIKEGKLNHFTIYNEPLVLYRDREGIVRCVKDVCPHRGASFLGGEVINGQLV 110
Query: 278 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 325
CPYHG +S+ G C + +++K+ PC E+EG I+I+ P
Sbjct: 111 CPYHGARFSSQGSCTNLDRITCQHIIDSNYDNYAKSIKLFQYPCVEKEGYIYIYYTGTPL 170
Query: 326 T--------ATIPCLLPPS-GFEI----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
++I LLP S GF + E+ ++ + +++N LD+ H + H T
Sbjct: 171 ANIEDFQIKSSINSLLPDSYGFPSLEYEYEEVYVDFKADWARIIENHLDILHVFWMHGDT 230
>gi|330809832|ref|YP_004354294.1| Vanillate monooxygenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423697481|ref|ZP_17671971.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q8r1-96]
gi|327377940|gb|AEA69290.1| Vanillate monooxygenase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004151|gb|EIK65478.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas fluorescens
Q8r1-96]
Length = 361
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 131/338 (38%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQICGEK-MVFYRGHEGKVAAVEDFCPHRGAPLSLGHVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVQERHGFIWVWPGDQ--ALADPALI 120
Query: 334 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
S + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAESDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ + G +W D P+D F PP VL +G++
Sbjct: 176 VTTVDGDEVVTARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G Q + P + + M+ F + + R
Sbjct: 236 HAGNGGYHAAPQFKASSIVVDFITPETETSIWYFWGMARHFQPQDE---ALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQRNLLDHPQRNLLKLNIDAGGVQSR 330
>gi|332708372|ref|ZP_08428350.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332352865|gb|EGJ32427.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 478
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 144/350 (41%), Gaps = 41/350 (11%)
Query: 199 KSLNVSGPVQPYNTRL---KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGC 254
K L + G YN+ + W+PV + DL F E+ V++ K + +
Sbjct: 17 KKLGLGG----YNSDFFDWEEVWYPVFYVEDLDKSQPTRFTLLEQDIVLWWDKHEQMWRA 72
Query: 255 VQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKS 306
+ C HR PL G +N+ GR++CPYHGW +S G+CE +P + R + S
Sbjct: 73 FVDQCPHRLAPLSEGRINQDGRLECPYHGWAFSGTGQCEVIPQQKERGKAEISQRACVNS 132
Query: 307 LPCFEQEGMIWIWPG--DEPPTATIPCL----LPPSGFEIHAEIVMELPIEHGLLLDNLL 360
LP +G+++++PG + +P + P G+ + +LP + L++N+L
Sbjct: 133 LPTKIAQGLLFVYPGLAENAAKTKVPIVDALEEDPDGW-VCLNTFRDLPYDALTLMENVL 191
Query: 361 DLAHAPFTHTSTFAKGWSVP--SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
D +H P+TH + +V L + G +G W P R +
Sbjct: 192 DPSHIPYTHHRSVGNRANVSPVELEVVESGKCGFKGVWAEGP-----RKGTLGRQDTTFI 246
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRH 475
PG + T + + P + + RL R F+S L + F++ + H
Sbjct: 247 APGLMWHDLTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSKLPRL-FLKLTPRWYSH 305
Query: 476 FAEQVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
+ + ED ++ L QER N + LP D + R W
Sbjct: 306 IGQNNVLEDDQIFLHYQERYIEQQGGSGNFNKAFYLPTKADLFVFQLRFW 355
>gi|148554460|ref|YP_001262042.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499650|gb|ABQ67904.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 423
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 34/322 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGSVN 272
L+N W+ A + +++ D + EP ++FR + G P + + C HR PL G
Sbjct: 84 LRNAWYVAALAGEVEADLLRRL-ILGEPVLLFRDEQSGAPSALHDLCPHRFAPLSRGKRV 142
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPG--DEPPTA 327
+G IQC YHG ++ GKC P R +++ P E+ GMIWIW G D +
Sbjct: 143 DGGIQCGYHGLVFAPSGKCVLNPHGNGRILPTAAVRAFPVIERHGMIWIWMGEHDLADPS 202
Query: 328 TIPCLLPPSGFEIHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAKGWS---VPSL 382
IP + LP + LL DN+LD +HA + H + G + P +
Sbjct: 203 RIPDFSYLDAADQRTRGAGYLPTRANYQLLTDNILDASHADYLHALLDSDGGTRHEAPRV 262
Query: 383 VKFLTPASGLQGYWDPYP----IDMEFRPPCMVLSTIGI--SKPGKL--------EGQNT 428
+ + + W P + + P V + + + P + EG+
Sbjct: 263 QELGDGSVEVSWTWGPASPMKFLSHMYAPGAEVHTRLAVRWHAPSAMHLRISSAAEGEEL 322
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYR--MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 486
Q +H+ P + ++T Y S D A+ F++ R FA +ED
Sbjct: 323 DQ-GLQAEAMHIMTPETARQTHYFYGGVRSFDVANDAYTAAFLEGARRAFA----DEDKP 377
Query: 487 LVLGQQERMNNGANVWNL-PVG 507
++ Q M + +++ + P+G
Sbjct: 378 MIEAVQANMGDETDIFAMRPLG 399
>gi|109897171|ref|YP_660426.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699452|gb|ABG39372.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 349
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 144/349 (41%), Gaps = 50/349 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
N W+ VA + D + TM PF V FR G +++ C HR PL LG V
Sbjct: 9 NTWY-VACTPD--EITMAPFARKICGIALVFFRNTHGTVVALEDFCPHRGAPLSLGKVEN 65
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF------EQEGMIWIWPGDE--PP 325
G++ C YHG DG + MP N ++++ PC E+ G IWIWPGD+
Sbjct: 66 GQLVCGYHGLRMGDDGATKAMP-----NQRVQAFPCIQRYAVVERYGYIWIWPGDKSLAD 120
Query: 326 TATIPCLLPPSGFEI-HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--------- 375
+ +P L P+ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 ESLLPKLEWPNNPNWGYGGGLYHIKCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVT 180
Query: 376 ----GWSVPS---LVKFLTP---ASGLQG--YWDPYPID----MEFRPPCMVLSTIGISK 419
G S+ + + + P AS L+ D P+D F P ++ +G++
Sbjct: 181 TKVDGESIVTSRFMDNVMAPPFWASALRANDLADDIPVDRWQICRFNLPSHIMIEVGVAH 240
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
GK ++C + P S + M+ DF + R
Sbjct: 241 AGKGGYLAPKECKASSIVVDFITPESDHSIWYFWGMARDFKPQDSE---LTNSIRSGQGA 297
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQ 528
+ EDL ++ QQE + + L + D GVR R +E+ KQ
Sbjct: 298 IFAEDLDVLERQQENLLRHPDRTLLKLDIDAGGVRA---RRMIERAIKQ 343
>gi|333896094|ref|YP_004469968.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333111359|gb|AEF16296.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 327
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ V S +LK + + F + V +R + C+ + C HR L LG V
Sbjct: 2 IKNQWYAVLDSKELKKNKPIGVTRFSQKLVFWRDELDNISCIFDKCCHRGASLALGKVAN 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
IQCP+HG++Y + GK +P+ L N K+ S E G IW+W G+ P
Sbjct: 62 NHIQCPFHGFKYDSSGKVTSIPANGKDRPVLSNFKVNSYIAKEAYGFIWVWYGE--PREN 119
Query: 329 IPCL---------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+P + GF +EI + + ++N LD+ H PF H +T +G
Sbjct: 120 LPKIKFFEELKEGFSYGGF---SEI---WRVHYTRAIENQLDVVHLPFVHNTTIGRG 170
>gi|393760646|ref|ZP_10349453.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161144|gb|EJC61211.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 347
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 21/174 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A + L +++P E V++R +DG P ++++C HR PL G +
Sbjct: 3 VRNAWYVGALAAQLGR-SLLPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+++C YHG + G C K P ++ ++S PC E+ G++W+W GD P
Sbjct: 62 DQVECGYHGLTFDCSGSCTKAPGVAQIPKSAVVRSYPCAERYGLVWVWMGD-------PA 114
Query: 332 LLPPSG-----------FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L PS + ++ MEL + + DNLLD +H + H S+F
Sbjct: 115 LADPSKLIDIPEWDNPEWGVNRGDAMELDCNYLYVTDNLLDPSHVSWVHQSSFG 168
>gi|358460096|ref|ZP_09170285.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357076603|gb|EHI86073.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 371
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++ W PVA ST+L D + EPWV+ R DG ++ C HR PL G V+
Sbjct: 12 LRHGWHPVALSTELGDQPLG-VRLLGEPWVLAR-LDGAVTAFEDRCPHRLAPLSAGRVDG 69
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ CPYHGW ++ G C +P+ R + E+ G++W+ P DEP +
Sbjct: 70 ETLVCPYHGWRFAAGGDCVAVPALGPGVPAPRRARATAAWGVTERYGLVWVAP-DEPFSE 128
Query: 328 TIPCLLPPSGFEIHAEIVME---LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+ LP + I +E GLL DN LD AH PF H T G
Sbjct: 129 IME--LPEDADDAFDSISLEPSRTTAAAGLLADNFLDTAHFPFVHAGTIGAG 178
>gi|406039915|ref|ZP_11047270.1| vanillate O-demethylase oxygenase [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 358
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ D++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEDIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG +GK MP+ ++ KS E+ G IW+WPG++ T
Sbjct: 62 GNLVCGYHGLVMGCEGKTISMPAQRVTGFPCNKSYAVVEKMGFIWVWPGEK--TLANEAD 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPVLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|414079207|ref|YP_007000631.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413972486|gb|AFW96574.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 443
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 144/341 (42%), Gaps = 61/341 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE--G 274
W+P+ DL+ P + VI++ K + C HR PL G + + G
Sbjct: 11 WYPLIPIEDLEPHKPKPMTLLGKRLVIWKPTKSETYRVFLDQCPHRLAPLSEGRIEDKTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
+ C YHGWE++ +G C+++P + N + S P +Q+ ++W+WP ++ T
Sbjct: 71 NLMCSYHGWEFNENGICQRVPQAENPEIVTKNQDNFCVISFPVRQQQELLWVWPDEK--T 128
Query: 327 ATI----PCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--- 374
A I P L P GF + + + +L + L++N+ D +H PF H
Sbjct: 129 AAIAENTPLPLSPQIDAEKGF-VWSNYIRDLEYDWQTLVENVADPSHVPFAHHGVQGNRD 187
Query: 375 KGWSVP-SLVKF------LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
K +P ++VK + A GL P + F PPC + I + GK
Sbjct: 188 KAQPIPINIVKSTMDLIEVDIARGL-------PTTITFEPPCRLEYAISLGNTGK----- 235
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
L + C+P S K+R++ + +FA L + + W H E+ L D +
Sbjct: 236 ------KLGLVVYCIPVSPGKSRIVAQFPRNFAKTLHRI--IPRWWNHINERHLVLDGDM 287
Query: 488 VLGQQER--------MNNGANVWNLPVGYDKLGVRYRLWRD 520
+ QQ+ + + LP D+L + +R W D
Sbjct: 288 IFLQQQEYYLQQKQLTQSWKTAYKLPTNADRLVIEFRNWFD 328
>gi|357030860|ref|ZP_09092804.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
morbifer G707]
gi|356415554|gb|EHH69197.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
morbifer G707]
Length = 376
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 12/168 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+PVA+S +LK + +P + R DG +++ CAHR PL LG V+
Sbjct: 42 DYWYPVAWSRELKRGKTIGTRYAGQPIALVRPMDGKVFALEDRCAHRQVPLSLGKVSGEA 101
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ PC EQ+G+I+I+PGD ++P
Sbjct: 102 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREQDGLIFIFPGDPAKADSVP-- 158
Query: 333 LPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P G ++ + + +NL+D+ H F H+ +
Sbjct: 159 FPKLGSVADPAYKTRRFGEKVNCHYSFMHENLMDMNHQ-FMHSKQMGQ 205
>gi|262371405|ref|ZP_06064722.1| vanillate O-demethylase oxygenase subunit [Acinetobacter johnsonii
SH046]
gi|262313627|gb|EEY94677.1| vanillate O-demethylase oxygenase subunit [Acinetobacter johnsonii
SH046]
Length = 358
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ DL+D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IRNAWYVACRPEDLQDKPLGRTICGEKI-VFYRGKENTVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG +GK MP+ ++ K+ E+ G +W+WPG++ L
Sbjct: 62 GNLVCGYHGLVMGCEGKAVAMPAQRINGFPCNKAYAVVEKFGFVWVWPGEK--NLADESL 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPVLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|325919763|ref|ZP_08181759.1| vanillate demethylase subunit A [Xanthomonas gardneri ATCC 19865]
gi|325549749|gb|EGD20607.1| vanillate demethylase subunit A [Xanthomonas gardneri ATCC 19865]
Length = 358
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-ALAPRKVCNLDVVLYRSTAGAVIALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS + N ++S P E+ +WIWPGD + T+ IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRSFPVAEKHRYVWIWPGDPAQADTSLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G I+A+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|148554606|ref|YP_001262188.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499796|gb|ABQ68050.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 338
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A ST++ D + C P V++R + G + + C HR PL G
Sbjct: 5 IRNLWYVAALSTEIADGPVGRRIC-SLPVVLYRERSGAVAALFDRCPHRFVPLSRGRCEG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI--- 329
R+ C YHG Y GKC P T R++ ++S P E+ G++WIW GD T+
Sbjct: 64 DRLVCGYHGLAYDGAGKCVANPQGTVTRSLDVRSFPVEERHGLVWIWMGDPALRDTVAIP 123
Query: 330 -------PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P + P G+ M L+ DN++DL+H F H T
Sbjct: 124 DFSLLDRPAMRPQYGY-------MWTAAHFELMTDNIMDLSHIEFLHADTLG 168
>gi|427707380|ref|YP_007049757.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
gi|427359885|gb|AFY42607.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
Length = 465
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 140/342 (40%), Gaps = 34/342 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPG-CVQNTCAHR 262
+G + P W+PV + DL + F E V++ K+ ++ C HR
Sbjct: 19 AGGLDPERFDWLEVWYPVHYVADLNKSQLTRFTLLERDLVLWWDKNEQTWRAFEDQCPHR 78
Query: 263 ACPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQE 313
PL G VN +G ++CPYHGW +S GKCE +P T R + SLP ++
Sbjct: 79 LAPLSEGRVNKDGWLECPYHGWAFSGTGKCESIPQQAPGGKAETSPRAC-VNSLPTTVRQ 137
Query: 314 GMIWIWPGDEPPTA-----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
G+++++PG A + L + + +LP + L++N+LD +H P+T
Sbjct: 138 GLLFVYPGKAENAAKTLVPIVDVLEENTEGWVCLNTFRDLPYDALTLMENVLDSSHIPYT 197
Query: 369 HTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
H T +V P ++ + G +G W P R + PG +
Sbjct: 198 HHRTVGNRANVAPVELEIVELGKWGFKGLWQEGP-----RKGTLGKQDTTFIAPGLMWHD 252
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLNE 483
T + + P + + RL R F+S L + F++ + H + + E
Sbjct: 253 LTSKQFGRTLTVVYATPIRKGECRLFARFPFKFSSNLPGL-FLKLTPRWYSHLGQNGVLE 311
Query: 484 DLRLVLGQQER-------MNNGANVWNLPVGYDKLGVRYRLW 518
D ++ L QER +N + LP D + R W
Sbjct: 312 DDQIFLHHQERYLEQKGGTDNFTKAFYLPTKADIFVFQLRSW 353
>gi|388565620|ref|ZP_10152105.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
gi|388267188|gb|EIK92693.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
Length = 366
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 36/238 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + C + V++R DG +++ C HR PL LG +
Sbjct: 11 NAWYAAAYDVEVGRSLLARTVC-NQKLVLYRQTDGRLAALEDACWHRLLPLSLGRLEGDE 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG Y+ +G+C MPS + N ++ P E+ +WIWPGD P L+
Sbjct: 70 VVCGYHGLVYNAEGRCTHMPSQETINPAACVRRFPVAEKHRFVWIWPGD--PALADEALI 127
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + E ++ + ++ L++DNL+DL H F H S+ G
Sbjct: 128 PDLHWNHDPEWAGDGKMIRVKCDYRLVVDNLMDLTHETFVHGSSIGNRAVAEAPFVATHG 187
Query: 377 WSVPSLVKFLT-------------PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
++ +++ A G G D + I + F PC V +G++ G
Sbjct: 188 ERTATVTRWMENIEAPPFWAGQIRQARGYTGPVDRWQI-IRFEAPCTVAIDVGVAPTG 244
>gi|310824238|ref|YP_003956596.1| rieske family iron-sulfur cluster-binding protein [Stigmatella
aurantiaca DW4/3-1]
gi|309397310|gb|ADO74769.1| Iron-sulfur cluster-binding protein, Rieske family [Stigmatella
aurantiaca DW4/3-1]
Length = 360
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
RL N WF + S +L ++ P V+FRG G P + + C HR PL LG V
Sbjct: 20 VRLPNCWFILCASGELGGKPLM-RTLQGTPLVLFRGDGGRPAALLDRCPHRNVPLSLGRV 78
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPP 325
EG++QC YHGW + G+C +P T+ + S EQ+G +W++ PG EP
Sbjct: 79 VEGQLQCGYHGWRFDAAGECRAIPGLTGETRAKARCAASYATREQDGFVWVYSTPGVEPT 138
Query: 326 TA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
+ P L P + V+ P L+N LD+ H F H F
Sbjct: 139 SEPYRFPLLDAPGYSSVRR--VVRAPGSLHAALENTLDVPHTAFLHGGLF 186
>gi|428224503|ref|YP_007108600.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
gi|427984404|gb|AFY65548.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
Length = 440
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 142/340 (41%), Gaps = 50/340 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIF--RGKDGIPGCVQNTCAHRACPLHLGSVNE-- 273
W+PV+ DL + P + VI+ R D + + C HR PL G V+E
Sbjct: 12 WYPVSPLEDLDPECPTPVVVLGKRIVIWKPRFSDHYRAFL-DQCPHRLAPLSEGRVDEKT 70
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK--------SLPCFEQEGMIWIWPGDEPP 325
G + C YHGW++ G C ++P + + K +LP G++W+WP +
Sbjct: 71 GHLMCSYHGWQFDEQGTCTQIPQAEDSELVAKNRDRYCVTALPMQAVNGLLWVWPDPDSA 130
Query: 326 TATIPCLLPPSGFE------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWS 378
LP S + + A IV +L + L++NL D +H PF H + +
Sbjct: 131 HLASAQALPLSPYWNAGSEFVWASIVRDLEYDWQTLVENLADPSHVPFAHHGVQGRRERA 190
Query: 379 VPSLVKFLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 433
P+ +K + + +G + + F PPC + I + RQ
Sbjct: 191 QPTPIKIVESTQDRIEAKSEG---SFTTKITFTPPCHLEYAISLG--------GDRQVGL 239
Query: 434 HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA--EQVLNEDLRLV--- 488
+ C+P + K+R++ + S +FA L + W H + +L+ D+ L+
Sbjct: 240 ----VTYCVPVAPGKSRIVAQFSRNFAKRLHQI--TPRWWDHISVRNSILDGDMILLHYQ 293
Query: 489 ---LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
L Q+ + + + +P D+L + +R W D +G
Sbjct: 294 EKELQQRSQTEDWKTAYKMPTSADRLVIEFRRWIDQYCQG 333
>gi|383773856|ref|YP_005452922.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
gi|381361980|dbj|BAL78810.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
Length = 349
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 126/315 (40%), Gaps = 47/315 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKP-ALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +Y++ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 67 VVCGYHGLKYNSQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 124
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------- 374
P G IH ++ L+LDNL+DL H F H S+
Sbjct: 125 PDMHWNHDPAWAGDGKTIHVN------CDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAP 178
Query: 375 -------KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
K +V ++ + P G G D + I + F PC + +G++ G
Sbjct: 179 FDVTHGEKTVTVTRWMRGIEPPPFWAKQLGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTG 237
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ R + L+ P + K + ++ + + R +
Sbjct: 238 TGAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYRIGEQRITTEI---REGVSGIF 294
Query: 482 NEDLRLVLGQQERMN 496
ED ++ QQ M+
Sbjct: 295 REDELILEAQQRAMD 309
>gi|300864498|ref|ZP_07109363.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
gi|300337508|emb|CBN54511.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
Length = 350
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 14/197 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
NFW+ VA S ++K + + +P VI+R +++ C HR L G V
Sbjct: 21 NFWYVVARSNEVKTQPIAVI-LWNQPIVIYRDNTEEIRALEDRCPHRQVKLSHGQVKGDL 79
Query: 276 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHGW ++ G+C ++ + +L + KI+S P EQ+G IW++PGDE +
Sbjct: 80 LECAYHGWRFNASGECAEVDYLADNQKLPSCKIRSFPVKEQDGFIWLFPGDETKAEQVSL 139
Query: 332 LLPPSGFEIH---AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
L P I+ V+ + L++NL+D+ H H + W+ P L
Sbjct: 140 LGLPEWEHINYIATVSVINCQAHYSFLIENLMDMYHG---HLHQDWQAWAEPVLQDLDED 196
Query: 389 ASGLQGYWDP---YPID 402
A + ++ Y ID
Sbjct: 197 ADRVDAHYQAQSYYKID 213
>gi|67925326|ref|ZP_00518682.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67852825|gb|EAM48228.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 468
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 141/347 (40%), Gaps = 31/347 (8%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCV 255
P K+ ++ G P + W+PV + DL F E+ VI+ K+
Sbjct: 13 PEKT-SIIGGSDPDYFDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIWWEEKNNQWSVF 71
Query: 256 QNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSL 307
++ C HR PL G +NE G ++CPYHGW +S G CE +P + + +K+L
Sbjct: 72 EDQCPHRLAPLSEGRINESGCLECPYHGWAFSGQGNCEIIPQQHPTGKAEKSLRASVKTL 131
Query: 308 PCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDL 362
P ++G+++++ G + P + L S + +LP + L++N+LD
Sbjct: 132 PTQVRQGLLFVYAGKPENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYDALTLMENVLDS 191
Query: 363 AHAPFTHTSTFAKGWSV-PSLVKFLTPAS-GLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
+H P+TH + +V P ++ + G +G W+ P R + P
Sbjct: 192 SHIPYTHHKSVGNRANVSPVELEVIESGKWGFKGVWEEGP-----RKGTLGRQETNFVAP 246
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAE 478
+ T + + P + K RL R F+S + + + H +
Sbjct: 247 AMMYHDLTSKQFGRTLTVVYATPIGKGKCRLFARFPFKFSSKIPKFFIKLTPRWYSHIGQ 306
Query: 479 QVLNEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
+ ED ++ L QER + A + LP D + +W
Sbjct: 307 NGVLEDDQIFLHHQERYLEQKGGSSKFAKAFYLPTKADLFVFQLHIW 353
>gi|149916805|ref|ZP_01905307.1| dioxygenase, iron-sulfur subunit, putative [Plesiocystis pacifica
SIR-1]
gi|149822522|gb|EDM81911.1| dioxygenase, iron-sulfur subunit, putative [Plesiocystis pacifica
SIR-1]
Length = 376
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N+W+PV +S DL + + + + +FRG DG V++ CAHR L G V +
Sbjct: 28 NYWYPVGYSKDLAPGEVTKVTFWGKDFALFRGSDGSLRAVEDRCAHRQLALSGGEVRGCQ 87
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 328
+ CPYHGW + DG+ +P +L +++ E+ G++W++PGD T
Sbjct: 88 VVCPYHGWTFDGDGRLVDVPHELFDKKLPKIRLPDFAVRERYGLMWLFPGDRDRAETVAM 147
Query: 329 --IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHA 365
IP L P + + H +++DN+ D HA
Sbjct: 148 PEIPELEGPDAWAC-VPVDFTWQAHHSMIIDNVSDFTHA 185
>gi|365885381|ref|ZP_09424384.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
gi|365285960|emb|CCD96915.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
Length = 347
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 130/329 (39%), Gaps = 37/329 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K M C + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQALMPRTICGKHV-VMYRKADGTIAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 377 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPAGTGAPEG 243
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R + L+ P + K + + ++ L + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDELI 300
Query: 488 VLGQQERM--NNGANVWNLPVGYDKLGVR 514
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|187918962|ref|YP_001887993.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187717400|gb|ACD18623.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 352
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 136/346 (39%), Gaps = 41/346 (11%)
Query: 201 LNVS-GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTC 259
+NV G V T ++ +W VA+S LKD + E VI R +G + C
Sbjct: 9 INVEKGEVPELFTAMRKYWHAVAYSGQLKDKPL-GVTLLGESVVIAR-LNGEVRAMHGRC 66
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGM 315
H+ L LG V +G+I+CPYHGW++ GKC ++P+ T+ NV I E G+
Sbjct: 67 PHKGTALALGEVVDGKIECPYHGWQFDGGGKCVRVPAREELTEGMNVSIDCYYAAEHVGI 126
Query: 316 IWIWPGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
IW+ E P A +P L F I E L+N +D AH P+ H T
Sbjct: 127 IWV--ALEKPIAPLPDFPELSDPSFRIQQGPSYEWATSAPRRLENFVDFAHFPYVHDGTI 184
Query: 374 A----------KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPP------CMVLSTIGI 417
K W +++F GY P P +F P ++ I
Sbjct: 185 GARDNPAVETVKVWREGHVLRF-----DRSGYLPPNPDLYKFLFPVRETDRVTPVNAYHI 239
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
P + P + TR+ + + DF + P +
Sbjct: 240 FLPATVHASFRMPNDKRYVLFMSASPVTEDLTRIFWWQARDF----RTEPMEDRFFIELE 295
Query: 478 EQVLNEDLRLVLGQQER--MNNGANVWN--LPV-GYDKLGVRYRLW 518
+ +L ED ++ Q+ + NG N + PV G D + + YR W
Sbjct: 296 DTILGEDKAIIESQRPKWFSFNGENRDDRETPVRGSDIVSIEYRRW 341
>gi|37521491|ref|NP_924868.1| oxygenase, Rieske iron-sulfur component [Gloeobacter violaceus PCC
7421]
gi|35212488|dbj|BAC89863.1| gll1922 [Gloeobacter violaceus PCC 7421]
Length = 346
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA S +LK + + E +FRG DG+ V++ C HR L G V EG
Sbjct: 16 NCWYAVAQSAELKTEPR-SITLWGEAIALFRGADGVAHAVEDRCPHRQVKLSHGRVVEGS 74
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQ--LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++C YHGW + DG+C +P + L ++++ P E +G +W++ GD + L
Sbjct: 75 LECAYHGWRFDGDGRCTHVPYREGSLPGCRLRTYPVREHDGFVWLFAGDPGRAHAVEPLR 134
Query: 334 PPSGFEIHAEIVMELPI----EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 385
P ++ I PI + L++NL+D+ H H + W L K
Sbjct: 135 LPEWDHLNY-IASVAPIACAAHYSYLIENLMDMHHG---HLHERFQAWGAAHLEKL 186
>gi|334132860|ref|ZP_08506615.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
gi|333441770|gb|EGK69742.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
Length = 364
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 123/313 (39%), Gaps = 38/313 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L + W+ A S+++ + + + +I+R +G P + + C HR PLHLG
Sbjct: 17 LTDCWYVAALSSEVPAEGLFHRRILDTSVLIYRKAEGAPVALHDRCPHRFAPLHLGKRIG 76
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
+ C YH + G C P + K++S P E+ G +WIW GD P
Sbjct: 77 DDVVCAYHALRFDCSGACTHNPHGNGLIPKAAKVRSFPLLEKYGFVWIWMGDA--ALADP 134
Query: 331 CLLPPSG--FEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSVPSLV 383
LP G + H A M + + + L++DN++DL+H H+ + +G P +
Sbjct: 135 AKLPDFGPLDDGHPNALAHTYMRMDVNYELIIDNVMDLSHIDHVHSEIISTRGQLSPLVP 194
Query: 384 KFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGISKPGK 422
A + W+ P P D+ + PP + T+ +
Sbjct: 195 AVKEGADSVNARWEWSQQPAMLIFANFLPDPAAPARHFFDITWTPPANIQLTVAAVQD-- 252
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
+G T + T + LH C P S T + + M+ H A + N
Sbjct: 253 -DGPLTLEHCTGQYDLHTCTPESATTTHYYFATRRNHDVENAEYNAMKIRAMHAAFE--N 309
Query: 483 EDLRLVLGQQERM 495
ED ++ Q+ M
Sbjct: 310 EDGPVIQATQDEM 322
>gi|2765429|emb|CAA75050.1| vanillate demethylase A [Pseudomonas putida]
Length = 353
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 37/311 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ ++ D + C E+ V +RG + V++ C RA PL LG V G
Sbjct: 4 RNTWYVACTPDEIADKPLGRQICGEKI-VFYRGHENRVAAVEDFCRTRA-PLSLGYVENG 61
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 62 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQ--AQADPSLI 119
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------------ 376
P + ++ + + + ++ L++DNL+DL H + H S+ +
Sbjct: 120 PHLEWAVNDDWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPYHRHR 179
Query: 377 ---WSVPSLVKFLTP-----ASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLE 424
S + + P A G D P++ F PP VL +G++ GK
Sbjct: 180 REVLSARHMENIMAPPFWRMALRGNGLADDVPVERWQICRFTPPSHVLIEVGVAHAGKGG 239
Query: 425 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 484
+ A+ + + P + + ++ +FA+ + + R ++ +ED
Sbjct: 240 YHAEQHKASSIVVWNFITPETDTSIWYFWVLACNFAAQDQALTANI---REGQGKIFSED 296
Query: 485 LRLVLGQQERM 495
L ++ QQ+ +
Sbjct: 297 LEMLERQQQNL 307
>gi|21241137|ref|NP_640719.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106440|gb|AAM35255.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 358
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTSGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|114570905|ref|YP_757585.1| Rieske (2Fe-2S) domain-containing protein [Maricaulis maris MCS10]
gi|114341367|gb|ABI66647.1| Rieske (2Fe-2S) domain protein [Maricaulis maris MCS10]
Length = 349
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
+K+ W+ A S++LK + + +P + R DG +++ C HR L G
Sbjct: 3 VKDLWYFGALSSELKPGQHLHRELLGQPVLFGRDHDGKAYALKDICPHRGILLSGGEAQN 62
Query: 272 --NEGRIQCPYHGWEYSTDGKCEKMPS--------TQLRNVKIKSLPCFEQEGMIWIWPG 321
E +++CPYHGW + TDG C +PS L ++++ P E +G+IWIW
Sbjct: 63 HDGETQVECPYHGWRFRTDGSCAAIPSLTADQAEAMDLTRIRVRRFPVHEDQGLIWIWYA 122
Query: 322 DEPPTATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
DE T P + PP ++ + ++H ++ L+D AH P+ H
Sbjct: 123 DEDQADTAPSIDPPKLDIPEGHKPKLVVHDIFNCHVDHAVI--GLMDPAHIPYIH 175
>gi|114327153|ref|YP_744310.1| Rieske (2Fe-2S) domain-containing protein [Granulibacter
bethesdensis CGDNIH1]
gi|114315327|gb|ABI61387.1| rieske [2Fe-2S] domain protein [Granulibacter bethesdensis CGDNIH1]
Length = 350
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 8/166 (4%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S +++ EP V+ RG+ G +++ CAHR PLH G V
Sbjct: 23 DYWYPLAWSGEIRKGKATGRHFAGEPIVLVRGESGRVYALEDRCAHRQVPLHAGVVEGDC 82
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
++C YHGW Y G+C +P +L N +++ PC E+EG+++I+PGD P
Sbjct: 83 LRCCYHGWTYDMSGRCIDVPYLGKDKLPN-GVRAYPCQEKEGLVFIFPGDAARAEMTPLP 141
Query: 333 LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ PS + E+ + + +NL+D+ H F H +
Sbjct: 142 VLPSISDPAYRTRRFGREVACHYSFMHENLIDMNHQ-FLHRKQMGQ 186
>gi|443622585|ref|ZP_21107107.1| putative Alpha-subunit oxygenase [Streptomyces viridochromogenes
Tue57]
gi|443343894|gb|ELS58014.1| putative Alpha-subunit oxygenase [Streptomyces viridochromogenes
Tue57]
Length = 353
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + ++ E V++R + DG P + + C HR PL +
Sbjct: 6 RNQWYVAAYSHEVGRE-LLGRTILGETLVLYRTQEDGTPVVLHDRCVHRRYPLSEAPTRL 64
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPP 325
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD +P
Sbjct: 65 DGDRIVCGYHGFTYDTTGACVYVPGQKRIPRTARVASYPVVEQDSLIWVWIGDAALADPQ 124
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------TS 371
T L G+ + + + ++GLL+DNLLDL+H + H T+
Sbjct: 125 TIPRARHLDSPGW-VTVRGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAETPITT 183
Query: 372 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
+G + + + F ++G++G + D+E+ PC+ + ++ G
Sbjct: 184 EVDEGAGIVRVSRHMDDAECPPFYAKSTGIRGRITRWQ-DIEYHAPCLYVLHSRVAPVGV 242
Query: 423 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
L E + H + PS K + +S D+A+
Sbjct: 243 LPEADGSDPNGFHTEVTYAITPSGDGKVYDFWMVSRDWAT 282
>gi|58038766|ref|YP_190730.1| ferredoxin subunit of ring-hydroxylating dioxygenase [Gluconobacter
oxydans 621H]
gi|58001180|gb|AAW60074.1| Putative ferredoxin subunit of ring-hydroxylating dioxygenases
[Gluconobacter oxydans 621H]
Length = 374
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 2/117 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+P+A+S DLK + P + R ++G +++ CAHR PL LG V+
Sbjct: 24 DFWYPLAWSKDLKRGKTIGRRFGRFPIALVRPEEGSVFALEDRCAHRQVPLSLGKVSGEA 83
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIP 330
+QC YHGW Y G+C +P R + +K+ PC E GMI+I+PGD ++P
Sbjct: 84 VQCCYHGWAYGRSGRCIDVPYLGKRKLPNGVKTYPCREAGGMIFIFPGDAEKAESVP 140
>gi|383644423|ref|ZP_09956829.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 362
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 127/338 (37%), Gaps = 39/338 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
K W+ A + +L D + C +P V FRG +G +++ C HR PL LG V +G
Sbjct: 17 KEAWYVAASAGELADRPLGRTIC-GQPMVFFRGAEGQAIALEDFCPHRGAPLSLGFVRDG 75
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPGD---EPPTATIP 330
+ C YHG G+ MP ++ R ++ E+ G +W+WPGD P
Sbjct: 76 ELVCGYHGLVMGCTGRATSMPGQRVDRFAGVRRFAVIERYGFLWVWPGDFETADPARLHH 135
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST------------------ 372
S + + ++ L++DNL+DL H + H+S+
Sbjct: 136 LEWAESPEWAYGGGYYHIHCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEAPVETLIDGE 195
Query: 373 ------FAKGWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
F G P K +GL D P+D F P VL +G++ GK
Sbjct: 196 QVVTRRFMDGIEAPPFWKMALRGAGLP---DDQPVDRWQICRFTLPSHVLIEVGVALAGK 252
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
+ + P + + M+ FA + + R +
Sbjct: 253 GGYDAEDRWKASSIVVDFITPETETSHHYFWGMARRFA--VADTALTDTI-RTGQGTIFG 309
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD 520
EDL ++ QQ + + + D GVR RL D
Sbjct: 310 EDLEMLERQQANLLRYPERKLMKLNIDAGGVRSRLMID 347
>gi|289767753|ref|ZP_06527131.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
gi|289697952|gb|EFD65381.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
Length = 356
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 145/339 (42%), Gaps = 46/339 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + ++ EP V++R + DG P + + C HR PL +
Sbjct: 6 RNQWYVAAYSHEVGRE-LLGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRL 64
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ RI C YHG+ Y T G C +P + R ++ S P E++ ++W+W GD P
Sbjct: 65 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVAERDSLVWVWIGD--PALAD 122
Query: 330 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 369
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 123 PEAVPRARHLDAPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAET 179
Query: 370 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
T+ +G + + + F ++G+ G D + D+E+ PC+ + ++
Sbjct: 180 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQ-DIEYHAPCLYVLHSRVA 238
Query: 419 KPGKLEGQNTRQC-ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
G L + H + PS K + +S D+A+ V ++L++
Sbjct: 239 PTGTLPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEV--TEFLYKSNR 296
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V+ + L L Q+ A L + D G+ R
Sbjct: 297 TVVMQDVDALNLLQRTLGGERAGYQELSINIDTGGLAAR 335
>gi|66045944|ref|YP_235785.1| Rieske (2Fe-2S) protein [Pseudomonas syringae pv. syringae B728a]
gi|422672408|ref|ZP_16731772.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
gi|63256651|gb|AAY37747.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. syringae B728a]
gi|330970146|gb|EGH70212.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aceris str.
M302273]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|425899118|ref|ZP_18875709.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397890090|gb|EJL06572.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 353
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 40/242 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIADKPLGRQICGEK-MVFYRGLEGRVAAVEDFCPHRGAPLALGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEP---PTATIP 330
+ C YHG DGK MP ++R K+ E+ G IW+WPGD+ P
Sbjct: 63 NLVCGYHGLVMGCDGKTVAMPGQRVRGFPCNKTFAVVERYGFIWVWPGDQALADPAQIHH 122
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAVSDEWAYGGGLFHIACDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVT 177
Query: 391 GLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGISKP 420
++G +W D P+D F PP VL +G++
Sbjct: 178 TVEGDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GK 422
G+
Sbjct: 238 GQ 239
>gi|443643758|ref|ZP_21127608.1| Vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. syringae B64]
gi|443283775|gb|ELS42780.1| Vanillate monooxygenase, oxygenase subunit [Pseudomonas syringae
pv. syringae B64]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDR--GKADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYNAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|428772905|ref|YP_007164693.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428687184|gb|AFZ47044.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium stanieri
PCC 7202]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA S ++KD V + V+FR G +++ C HR L G V +
Sbjct: 18 NHWYVVARSVEVKDQP-VSVTLWHNEIVLFRDSQGNINALEDRCPHRQVKLSPGKVVDDN 76
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHGW++ +G C +P +L KIK P E +G IW++PGD A P
Sbjct: 77 IECAYHGWQFDKEGNCSFVPYLDERQKLPRCKIKRYPVQELDGFIWLFPGDGDSEAVSPM 136
Query: 332 LLPPSGFEIHAEIVMEL--PIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
LP + V E+ P + L++NL+D+ H H + W+ +L K
Sbjct: 137 GLPEWEHLNYIASVAEVDCPGHYSYLIENLMDMHHG---HLHDNYQAWASATLNK 188
>gi|423095041|ref|ZP_17082837.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886188|gb|EJL02671.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 265
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 6/167 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ +++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGSEVKVGALFQRTLLNEPVVFFRDSHGAAQAIADRCPHRFAPLGMGVLKG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDE--PPTAT 328
++CPYHG E+ G C P R K+K+ P E+ ++WIW GD
Sbjct: 64 DAVRCPYHGLEFDGSGSCVHYPHGDGAIPRAAKVKAYPLVERYSLLWIWMGDMSLADATL 123
Query: 329 IPCLLPPSGFEIH-AEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
IP G + + + + L DN++DL+H F H ST
Sbjct: 124 IPDFSCMDGDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|440723531|ref|ZP_20903894.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440728015|ref|ZP_20908238.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
gi|440359506|gb|ELP96814.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34876]
gi|440362544|gb|ELP99731.1| Rieske (2Fe-2S) protein [Pseudomonas syringae BRIP34881]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDR--ENADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFNIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEA---LTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|254461027|ref|ZP_05074443.1| vanillate O-demethylase oxygenase subunit [Rhodobacterales
bacterium HTCC2083]
gi|206677616|gb|EDZ42103.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 355
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ +S D +D + E+ V+FR DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSKDFGED-LRAITITEQNLVMFRSTDGQIVALEDRCPHRLLPLSKGKRIG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+QC YHG + TDGKC ++P + +++ P E G++WIWPG+ A P
Sbjct: 63 DTVQCGYHGMTFGTDGKCVRVPGQDNLPASAYVETFPVHEAHGIVWIWPGEAALAADTPV 122
Query: 332 LLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
P + H + L + + +NL+D AH F H +T S
Sbjct: 123 FDLPEFSDPNWHAHHGDGLHLNANYLNVAENLVDPAHVSFVHPTTLGSAAS 173
>gi|427724958|ref|YP_007072235.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Leptolyngbya
sp. PCC 7376]
gi|427356678|gb|AFY39401.1| Rieske (2Fe-2S) iron-sulfur domain protein [Leptolyngbya sp. PCC
7376]
Length = 363
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 27/210 (12%)
Query: 184 TSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEP 241
TS+QS+ V G + ++ KN W+ A S ++ D PF ++E
Sbjct: 5 TSQQSVIAVSGSSDVRVCGIN----------KNHWYVAALSREVIDQ---PFGLTLWKEK 51
Query: 242 WVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQ 298
+V+FR + G +++ C HR L G V R++C YHGW++ +G C +P Q
Sbjct: 52 FVLFRDRQGSVHALEDRCPHRQVKLSSGQVVGDRLECAYHGWQFDAEGTCAHVPYLAENQ 111
Query: 299 LR-NVKIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIE--H 352
R N KI+SLP EQ+G IW++PGD P LP + V + E
Sbjct: 112 RRPNCKIRSLPVREQDGFIWVFPGDLETLEEQKIEPFSLPEWAHLNYIVTVSVIDCEGHF 171
Query: 353 GLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
L++NL+D+ H H + W+ L
Sbjct: 172 SYLIENLMDMYHG---HLHNDYQAWASAKL 198
>gi|422631632|ref|ZP_16696815.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. pisi str. 1704B]
gi|424067650|ref|ZP_17805106.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
gi|330941461|gb|EGH44272.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. pisi str. 1704B]
gi|408000219|gb|EKG40581.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. avellanae str. ISPaVe013]
Length = 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADE---ALTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|390570113|ref|ZP_10250385.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|420250160|ref|ZP_14753385.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|389938000|gb|EIM99856.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|398062256|gb|EJL54036.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 374
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S ++K EP V+ R + G +++ CAHR PL G V+
Sbjct: 31 DHWYPLAWSREVKRGKTHAVRFAGEPIVLARSESGKVFALEDRCAHRQVPLSGGVVDGEA 90
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
I+C YHGW Y GKC +P + +++ PC E EG+I+++PGD T+P L
Sbjct: 91 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRAYPCREAEGLIFVFPGDAALAETMP--L 148
Query: 334 PPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
PP G E+ + + +NL+D+ H F H K
Sbjct: 149 PPLGSVADKAYKTRRFGREVACHYSFMHENLMDMNHQ-FLHRKQMGK 194
>gi|302555436|ref|ZP_07307778.1| alpha-subunit oxygenase [Streptomyces viridochromogenes DSM 40736]
gi|302473054|gb|EFL36147.1| alpha-subunit oxygenase [Streptomyces viridochromogenes DSM 40736]
Length = 356
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 48/286 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + ++ E V++R ++G P + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LLGRTILGETLVLYRTAEEGTPVVLHDRCVHRRYPLSEAPTRL 67
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD
Sbjct: 68 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD------- 120
Query: 330 PCLLPPSGFE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTH---------- 369
P L P G + + + ++GLL+DNLLDL+H + H
Sbjct: 121 PALADPQGIPRARHLDSPGWVTVRGMEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVA 180
Query: 370 ----TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIG 416
T+ +G + + + F ++G++G + D+E+ PC+ L
Sbjct: 181 ETPITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSR 239
Query: 417 ISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
I+ G L E + H + PS + + +S D+A+
Sbjct: 240 IAPAGVLPEADGSDPNGFHTEITYAITPSGDGEVYDFWAVSRDWAT 285
>gi|405351774|ref|ZP_11023192.1| Phenylpropionate dioxygenase [Chondromyces apiculatus DSM 436]
gi|397093075|gb|EJJ23807.1| Phenylpropionate dioxygenase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 393
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 24/186 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK++W+ ST+L+ + F V+FR G P +++ C HR L G+V +
Sbjct: 32 LKDYWYVACLSTELRPGKPLARTLFGTGLVLFRDAQGQPTALRDRCLHRNARLSRGAVFD 91
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNV----------------KIKSLPCFE 311
GRI CPYHGW Y G ++PS ++L N ++ P E
Sbjct: 92 GRIGCPYHGWVYDASGAVVEVPSLGPSQRSELLNAEACAREGLKPEPCALGRVSRFPAVE 151
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFTH 369
Q+G+++++ G + P P +P G + M +G+ L++N +D+ H F H
Sbjct: 152 QDGLVFVYMGGDAPARAAPFRVPHWGQDGWTVYFMVTRFPNGVTNLVENFMDVPHTLFVH 211
Query: 370 TSTFAK 375
F K
Sbjct: 212 PGWFRK 217
>gi|158333261|ref|YP_001514433.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158303502|gb|ABW25119.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 467
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 38/365 (10%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHR 262
+G P + W+P+A+ DL + + F + VI+ + V + C HR
Sbjct: 15 AGGDDPNRFDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHR 74
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-STQLRNVK------IKSLPCFEQEG 314
L G ++E G I+CPYHGW +S G+CE++P R+ + + SLP Q+G
Sbjct: 75 LARLSEGRIDEDGLIECPYHGWAFSGTGECERIPQQVSGRSAESSPRACVDSLPISIQQG 134
Query: 315 MIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTH 369
+++ + G A P ++ P I++ +LP + LL+N+LD +H P+TH
Sbjct: 135 LLFAYAGQPERAALTPVPIVGPIEESPDDWIILDGFRDLPYDVLTLLENVLDPSHLPYTH 194
Query: 370 TSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
+ S V+ SG QG+ W+ P R + T PG +
Sbjct: 195 HRSVGNR-SNAGPVELEVMESGKQGFYGVWEEGP-----RQGKLGTQTTTFVAPGLMWHD 248
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVL 481
T + P + + R+ R F+S ++ H P + H + +
Sbjct: 249 LTSSQFGRTLTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTP---TWFSHLGQNAI 305
Query: 482 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 534
ED ++ L QER + A + LP D+ + W++ + + P
Sbjct: 306 LEDDQIFLHFQERYLERTKDSKSIAQAFYLPTRADRFVLALHQWQERFQADPFPGQSLPP 365
Query: 535 MQTRK 539
+TR+
Sbjct: 366 ERTRE 370
>gi|381171298|ref|ZP_09880445.1| rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688215|emb|CCG36932.1| rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 358
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|83955042|ref|ZP_00963698.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83840371|gb|EAP79544.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 355
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 37/267 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ +STD D+ +VP + V +R DG +++ C HR PL G
Sbjct: 4 VRNAWYVAGWSTDFGDE-LVPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTA 327
IQC YHG + DG C ++P S ++ + S P E+ +++IW GD +P A
Sbjct: 63 DTIQCGYHGMTFGADGACVRVPGQSNLPKSAYVDSYPVLERHDIVFIWMGDADKADPALA 122
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK- 384
L G+ +H + + + + +NL+D AH F H +T S VP VK
Sbjct: 123 FDLPELGQEGWHVHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVKT 182
Query: 385 ------------------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTIGISKPGKL 423
F G G W Y + M P + G S KL
Sbjct: 183 ADEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHYYYLHM----PSTAVIDFG-SSDAKL 237
Query: 424 E-GQNTRQCATHLHQLHVCLPSSRKKT 449
E ++ R + LH P + T
Sbjct: 238 ELPEDQRNKGVRIFALHFVTPVTEDYT 264
>gi|111220909|ref|YP_711703.1| oxidoreductase [Frankia alni ACN14a]
gi|111148441|emb|CAJ60112.1| putative oxidoreductase, Rieske [2Fe-2S] region [Frankia alni
ACN14a]
Length = 383
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 132/338 (39%), Gaps = 66/338 (19%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T L++ W PVA S ++ D+ V EPWV+ R DG+ + C HR PL G
Sbjct: 9 TTALRHGWHPVARSEEVADEP-VTVRLLGEPWVLARLDDGL-AAFADRCPHRLAPLSAGR 66
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 324
V+ + C YHGW + G+C +P+ R E+ G+IWI P +EP
Sbjct: 67 VDARELVCGYHGWRFVASGECTAVPALGPGVPPPRRARAAPPWGVVERHGLIWIAP-EEP 125
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEH----GLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
T I P E + V P GLL DN LD AH PF H T G +
Sbjct: 126 FTDLIEI---PEADEPGFDSVWLEPSRSSACAGLLADNFLDTAHFPFVHAGTIGAGEATV 182
Query: 381 SLVKFLTP---------------------ASG----LQGYWDPYPIDMEFRPPCMVLSTI 415
+TP A+G +Q W Y +RPP M+ +
Sbjct: 183 VAPYRVTPDGDGFVVQMEQRVANPEDPKVATGEHPLVQRRWSTY----VYRPPFMLRLRL 238
Query: 416 GISKPGKLEGQNTRQCATHLHQLHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 474
G ++ + CL P TR+ R+ D + M R
Sbjct: 239 DYPDAGM------------INTIQFCLQPEDAGSTRIYTRLLRD--DLGGDAALMAEAAR 284
Query: 475 HFAEQVLNEDLRLVLGQQERMN-NGANVWNLPVGYDKL 511
F + VL+EDL L QER + +G + P G + L
Sbjct: 285 -FEQAVLDEDLAL----QERFDLDGLPLLGDPPGGEPL 317
>gi|388547602|ref|ZP_10150865.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
gi|388274362|gb|EIK93961.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
Length = 348
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 39/334 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C E V +R G +++ C HR PL LG V +G
Sbjct: 4 KNTWYVACTPDELAPGPLGRQICGES-MVFYRNGSGQVAALEDFCPHRGAPLSLGRVVDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIPC 331
++ C YHG DGK + MP ++ + + ++ C E+ G IW+WPG++ IP
Sbjct: 63 QLVCGYHGLVMGCDGKVQSMPGQRVASFPLTRTFACVERHGFIWVWPGEQALAEPGQIPH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---GWSVPSLV---- 383
L + + + + E+ ++ L++DNL+DL H + H S+ + ++P+
Sbjct: 123 LEWANNPQWAYGGGLYEIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEALPTTTVNGD 182
Query: 384 --------------KFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGKLEG 425
F A G D P+D F PP V+ +G++ G L G
Sbjct: 183 EVVTARHMHNIMAPPFWRQALRGNGLADDVPVDRWQICRFTPPSHVMIEVGVAHAG-LGG 241
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE---QVLN 482
+ A + V + R +T + Y + + P Q L E ++ +
Sbjct: 242 YDAPD-AHKAASIVVDFITPRTETSIWYFWGM----ARRFRPEDQALTDTIREGQGRIFS 296
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ ++ L + D GVR R
Sbjct: 297 EDLEMLERQQRNLSAHPERRLLKLKIDVGGVRAR 330
>gi|257059528|ref|YP_003137416.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589694|gb|ACV00581.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 349
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 151/351 (43%), Gaps = 32/351 (9%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
++ L+N W+ LK M EP ++ R +DG +++ C HR PL G
Sbjct: 2 SSLLRNAWYVALPGKQLKPGKMTHKKMLGEPVLVGRREDGEVFAMRDICPHRGIPLQYGW 61
Query: 271 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW---- 319
+ + C YHGW+++T DG+C ++PS + +++ + PC E +G IW++
Sbjct: 62 LEGDGVCCCYHGWKFNTSDGRCSEIPSLTEYDDLDISRIRVPTYPCREVQGNIWVYFAED 121
Query: 320 ------PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
P + PP TIP + P I I I+H ++ L+D AH P+ H+S
Sbjct: 122 SKKEINPSELPPVPTIPDFGKVEPG---ISETIHFACHIDHAII--GLMDPAHGPYVHSS 176
Query: 372 TFAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQ 430
+ + VK QG+ PY + + RP ++ + + I E + R
Sbjct: 177 WWWRSGPRKFRVKEKQYEPVAQGFRLVPYDMPVSARPYKILGNQVSIEI--VFELPSVRT 234
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFM---QYLWRHFAEQVLNEDLRL 487
+ CL ++ T + F S+ +P+M + L Q L +D +
Sbjct: 235 EILRGDRYSACLLTT--ITPIDENECEAFQSIYWTIPWMGLFKPLLSLLTRQFLAQDRDV 292
Query: 488 VLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
V+ QQE + + + + +RL ++ + A+ PF P++ R
Sbjct: 293 VIQQQEGLKYNPALMLIDDADTQAKWYFRLKQEYQKSQAENRPFKNPVEPR 343
>gi|415908364|ref|ZP_11552965.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
gi|407762803|gb|EKF71586.1| Vanillate O-demethylase, oxygenase subunit [Herbaspirillum
frisingense GSF30]
Length = 349
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + C E+ V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIASKPLGRQICGEKI-VFYRGAEGQVAAVEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG E DGK MP ++R I+S E+ G IW+WPG++ P L+
Sbjct: 63 QLVCGYHGLEMGCDGKPVSMPGQRVRGFPCIRSFAVVERYGFIWVWPGEK--ELADPALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 369
+ + E + + ++ L++DNL+DL H + H
Sbjct: 121 HHLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPVNTRVE 180
Query: 370 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
TS + + P + +GL D P+D F PP V+ +G++
Sbjct: 181 GEQVITSRYMENIMAPPFWRMALRGNGLA---DDVPVDRWQVCRFTPPSHVMIEVGVAHA 237
Query: 421 G 421
G
Sbjct: 238 G 238
>gi|365887865|ref|ZP_09426679.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
gi|365336509|emb|CCD99210.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
Length = 347
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEIKQ-ALLPRTICGKHVVMYRKSDGTIAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG ++S G+C MPS + N +++ P E+ +W+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFVWLWMGD--PALADPATI 124
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 377 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEG 243
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R + L+ P + K + + ++ L + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQ--LSEQRLTTEI-REGVSGIFREDELI 300
Query: 488 VLGQQERM--NNGANVWNLPVGYDKLGVR 514
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|294464913|gb|ADE77961.1| unknown [Picea sitchensis]
Length = 480
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 142/354 (40%), Gaps = 70/354 (19%)
Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
W+P A DL D +V +D + W +F ++C HR PL
Sbjct: 95 WYPAAPEYDLDKRVPHAFTVMGLDIVVWWDKRSQTWQVF----------DDSCPHRRAPL 144
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI--------KSLPCFEQEGMIW 317
G ++E G +QC YHGW + G C+ +P ++ + P +Q+G+IW
Sbjct: 145 SEGRIDEDGDLQCSYHGWCFGPKGDCKYIPQEPSDGPRVHTSKRACASTYPSLQQQGIIW 204
Query: 318 IWPGDEP---------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
WP +P IP L PS F + +LP + +L +NL+D +H P+
Sbjct: 205 FWPNTDPQFKDTALEKKPPLIPALSDPS-FPCTLSM-RDLPYGYEILTENLMDPSHVPYA 262
Query: 369 HTSTFAKG---WSVPSLVKFLTP---------ASGLQGYWDPYPIDMEFRPPCMVLS--T 414
H ++ W+ S + P SG +G F PPC+ +S T
Sbjct: 263 HYGLGSQTPMPWNNISFKRAGRPLDLCLERLDESGFRG--KQVTGFSNFTPPCVYVSHHT 320
Query: 415 IGISKPGK----LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQ 470
SK GK + G + T + + +C+P S ++RL++ +FA + + +
Sbjct: 321 FKTSKEGKPQPSISGTEQEKMKT-IFFIFICIPVSPGRSRLIWAFPRNFALWMYRL--LP 377
Query: 471 YLWRHFAEQVLNEDLRLVLGQQER--MNNGANVWN----LPVGYDKLGVRYRLW 518
H + + + L +ER N G W +P D V +R W
Sbjct: 378 RWLTHIQQNLFPDSDLYFLHLEERKLQNYGKTNWEKACYVPTAADAFVVAFRKW 431
>gi|346723290|ref|YP_004849959.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|346648037|gb|AEO40661.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 358
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGTVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWAHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|16126632|ref|NP_421196.1| vanillate O-demethylase oxygenase [Caulobacter crescentus CB15]
gi|13423928|gb|AAK24364.1| vanillate O-demethylase oxygenase, subunit A [Caulobacter
crescentus CB15]
Length = 353
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 34/305 (11%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 302
V RGKD P +++ C HR PL LG V +G + C YHG +G+ MP ++
Sbjct: 36 VFHRGKDDRPVALEDFCPHRGAPLSLGFVRDGELVCGYHGLTMGCEGRATAMPGQRVAAF 95
Query: 303 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 358
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 96 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWADSPDWAYGGGLYHIACDYRLMVDN 155
Query: 359 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 392
L+DL H + H TS F +G P + +GL
Sbjct: 156 LMDLTHETYVHATSIGQKEIDEAPVTTRLEGEEVVTSRFMEGIHAPPFWRMALRGAGLPE 215
Query: 393 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 452
D + I F P V+ +G++ G + P +
Sbjct: 216 NALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYHAPADKKVSSVVVDFITPETETSHHYF 274
Query: 453 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 512
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 275 WGMARSFA--VGDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAYPDRKLLKLNIDAGG 331
Query: 513 VRYRL 517
VR R+
Sbjct: 332 VRSRM 336
>gi|390991190|ref|ZP_10261461.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372554091|emb|CCF68436.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 353
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|357032542|ref|ZP_09094477.1| putative ferredoxin subunit of ring-hydroxylating dioxygenase
[Gluconobacter morbifer G707]
gi|356413533|gb|EHH67185.1| putative ferredoxin subunit of ring-hydroxylating dioxygenase
[Gluconobacter morbifer G707]
Length = 373
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S D+K V + P + R ++G +++ CAHR PL LG V+
Sbjct: 24 DYWYPIAWSKDVKRGKTVGRRFGKHPIALVRPEEGSVFALEDRCAHRQVPLSLGKVSGEA 83
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATIP 330
+QC YHGW Y G+C +P +L N +K+ PC E GMI+I+PGD + T +P
Sbjct: 84 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVKTYPCREVGGMIFIFPGDAEKAETTPLP 142
Query: 331 CLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTH 369
L S + ++ + L +NL+D+ H F H
Sbjct: 143 KLAQVSNPAFKTRLFSPQVKCHYTFLHENLMDMNHQ-FLH 181
>gi|422669981|ref|ZP_16729817.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330982326|gb|EGH80429.1| Rieske [2Fe-2S] region [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 354
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFYIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK ++ + P + + M+ +F + + R
Sbjct: 236 HAGKGGYDAPKEFKASSIVVDFITPETDTSIWYFWGMARNFNPADEA---LTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ EDL ++ QQ+ + + L + D GV+ R
Sbjct: 293 KIFTEDLEMLERQQQNLLKHPHRNLLKLNIDAGGVQSR 330
>gi|326328839|ref|ZP_08195174.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
gi|325953370|gb|EGD45375.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
Length = 367
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 127/320 (39%), Gaps = 49/320 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ A+ ++ + P ++R DG + + C HR PL G V
Sbjct: 20 RNAWYVAAWDHEVTAKQPLARTIAGVPLALWRNSDGRAVALADACWHRLAPLSKGKVLGD 79
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
IQCPYHG Y++ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 80 EIQCPYHGLRYNSAGRCTSMPAQETINPSAIVPSYPVVERYRYVWVWVGD--PDLADPAT 137
Query: 333 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG----- 376
+P G I+A P + L+LDNL+DL H F H+S+ +
Sbjct: 138 VPDMHQMDSPDWAGDGETIYA------PCNYQLVLDNLMDLTHEEFVHSSSIGQDELSEA 191
Query: 377 -WSVPSLVKFLT----------PASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 416
+ V + +T P L+ D +P +D + F P + +G
Sbjct: 192 EFEVSHDDRHVTVTRWMRDIDAPPFWLKNMRDKFPGFTGKVDRWQIIHFEAPSTICIDVG 251
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
++K G + R + ++ P + + + + ++ L+ L R
Sbjct: 252 VAKAGTGAPEGDRSQGVNGFVMNTITPETARTSHYFWAFMRNYR--LESQTITTQL-RQG 308
Query: 477 AEQVLNEDLRLVLGQQERMN 496
V ED ++ QQ ++
Sbjct: 309 VHGVFGEDEEMLAAQQRAID 328
>gi|146338927|ref|YP_001203975.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. ORS 278]
gi|146191733|emb|CAL75738.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 278]
Length = 347
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTYMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 377 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFESPCTVTIDVGVAPTGTGAPEG 243
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R + L+ P + K + + ++ L + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYK--LSEQRLTTEI-REGVSGIFREDEFI 300
Query: 488 VLGQQERM--NNGANVWNLPVGYDKLGVR 514
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|384921320|ref|ZP_10021304.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
gi|384464805|gb|EIE49366.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
Length = 356
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A+ST++ DD + F + V+FR DG +++ C HR PL G
Sbjct: 5 VRNAWYVAAWSTEI-DDELRRFTILGDHVVMFRKTDGTVAALEDRCPHRLLPLSRGKRVG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGD----EPPTA 327
+QC YHG + G C ++P T L ++ ++ + P E G++WIW GD +P T
Sbjct: 64 DTVQCGYHGLTFDCSGACVRVPGQTNLPKSARVDAFPIVENHGIVWIWMGDPTRADPETV 123
Query: 328 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
+P P+ + +H + L + + +NL+D AH F H +T S
Sbjct: 124 FDMPEFSDPN-WAVHHGDALHLESHYLNVAENLVDPAHVSFVHPTTLGNAAS 174
>gi|399077235|ref|ZP_10752329.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398035712|gb|EJL28944.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 371
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 81/180 (45%), Gaps = 36/180 (20%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN--- 272
+ W+ S DLK M + EP +I R K G +++ C HRA L G
Sbjct: 28 DAWYMACLSPDLKPGKMESREFLGEPVLIGRTKAGAVYALRDVCPHRAANLSAGKTRTEA 87
Query: 273 EGR--IQCPYHGWEYSTDGKCEKMPSTQLRN------VKIKSLPCFEQEGMIWIWPGDEP 324
+GR ++CPYHGW + TDG C K+PS N V+++ P E +G++WIW +P
Sbjct: 88 DGRETVECPYHGWRFHTDGGCAKIPSLTADNPLDISKVRVRKYPLVESQGLVWIWMSGDP 147
Query: 325 ---------------PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
P L+ ++IH I+H +L L+D AH PF H
Sbjct: 148 RFDGQPPAPPPVIPGVVGGKPKLVDRLDYDIH--------IDHAVL--GLIDPAHGPFVH 197
>gi|87199507|ref|YP_496764.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135188|gb|ABD25930.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 351
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 85/179 (47%), Gaps = 14/179 (7%)
Query: 211 NTR---LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 267
NTR ++N W+ + + P EP V +R DG + + C HR PL
Sbjct: 3 NTRPNFVRNCWYVAGWDYEFTAGKPHPRTFLAEPVVFYRKGDGTLVAMADRCVHRLAPLS 62
Query: 268 LGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPP 325
LG + I+C YHG ++ DGKC ++P + + I++ P E+ WIW GD P
Sbjct: 63 LGRLEGDDIRCMYHGMRFTADGKCVEIPGQDMIPSSACIQTYPVVEKGSWAWIWMGD--P 120
Query: 326 TATIPCLLPPS-GFEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
LLP + G + ++ ++ H L+ DNLLDL+H + H ++F GW
Sbjct: 121 HLADAALLPDARGLDDPVWVLKSGQLDYAAPHELINDNLLDLSHLAYVHVASFGATPGW 179
>gi|398849503|ref|ZP_10606240.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250755|gb|EJN36056.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 370
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ + S+ L + + P + +V FR G + + C HR L G+
Sbjct: 2 LKNLWYVILPSSQLSQE-IAPIRLLGQSFVAFRDSHGKARLLSDICVHRGGSLSAGAKVG 60
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST-QLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+QCPYHGW + DG+C ++P+ LR ++ + P E+ G IW + GD P
Sbjct: 61 DSVQCPYHGWRFDGDGRCVQIPAQPTLRIPEKARVDAYPTEERYGWIWAFLGDLPEAERP 120
Query: 330 PCLLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
P LP + A + + + +++N LD AHAPF H STF + P +
Sbjct: 121 P--LPALDWLDDANVRVVSGHFDWEASWDRVIENGLDFAHAPFVHGSTFGDP-AHPEIEA 177
Query: 385 FLTPASGLQG 394
F + QG
Sbjct: 178 FDVDSDAWQG 187
>gi|398824385|ref|ZP_10582719.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
gi|398224947|gb|EJN11235.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
Length = 349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 127/308 (41%), Gaps = 33/308 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKP-ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 67 VVCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 124
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSL 382
P + + + ++ L+LDNL+DL H F H S+ + V
Sbjct: 125 PDMHWNHDPAWAGDGKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 383 VKFLTPASGLQG-----YW-----DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNT 428
K +T ++G +W P +D + F PC + +G++ G +
Sbjct: 185 EKTVTVTRWMRGIEAPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGD 244
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
R + L+ P + K + ++ + + R + +ED ++
Sbjct: 245 RSQGVNGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELIL 301
Query: 489 LGQQERMN 496
QQ M+
Sbjct: 302 EAQQRAMD 309
>gi|410665771|ref|YP_006918142.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
gi|409028128|gb|AFV00413.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
Length = 341
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+PVA + +L D + P VIFR + P + + C HR PL G +G+IQ
Sbjct: 11 WWPVAVARELSADRPMRRQLNGLPLVIFRTNELKPAALVDACPHRMAPLSQGQCTQGQIQ 70
Query: 278 CPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
CPYHGW + G+C ++P Q R +++L C E G+IW+ A P
Sbjct: 71 CPYHGWTFDGQGRCVRIPGMQDAHALSRRPLVRALGCVESAGLIWV-----QTEAGAPLN 125
Query: 333 LPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
LP + + M+ ++ LL +N L+ H F H + + L P
Sbjct: 126 LPDESNGVD-QFFMQSTVDATLLDIAENFLEAFHTHFVHRGLVRRDTQRQQVDALLRPID 184
Query: 391 G 391
G
Sbjct: 185 G 185
>gi|407697722|ref|YP_006822510.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
gi|407255060|gb|AFT72167.1| Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
Length = 330
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ FW+PV ++LK F+ + +F DG+P +++ C HR L LG V +
Sbjct: 9 FRRFWYPVMPMSELKQRPQR-FELLGQALALFLDDDGVPAALEDRCCHRTARLSLGEVCD 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPPTATI 329
I CPYHGW Y+ +G+C +P R+ ++K+ C E+ G W+ E P I
Sbjct: 68 NAIACPYHGWRYNREGQCVLVPQMPDRDPGPKRRVKAFSCREKYGYAWV--ALEQPLFDI 125
Query: 330 PCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P F + E E + +++N LD+AH + H TF
Sbjct: 126 PDFPEAADDSFVLIHEFYEEWRVSGLRVMENELDMAHPSYVHLGTFG 172
>gi|221235412|ref|YP_002517849.1| vanillate demethylase oxygenase subunit A vanA [Caulobacter
crescentus NA1000]
gi|220964585|gb|ACL95941.1| vanillate demethylase oxygenase subunit A vanA [Caulobacter
crescentus NA1000]
Length = 358
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 119/305 (39%), Gaps = 34/305 (11%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 302
V RGKD P +++ C HR PL LG V +G + C YHG +G+ MP ++
Sbjct: 41 VFHRGKDDRPVALEDFCPHRGAPLSLGFVRDGELVCGYHGLTMGCEGRATAMPGQRVAAF 100
Query: 303 -KIKSLPCFEQEGMIWIWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDN 358
I++ P E+ G IW+WPGD P P S + + + ++ L++DN
Sbjct: 101 PAIRAFPVLERYGFIWVWPGDPAQADPAKLHPLFWADSPDWAYGGGLYHIACDYRLMVDN 160
Query: 359 LLDLAHAPFTH------------------------TSTFAKGWSVPSLVKFLTPASGL-- 392
L+DL H + H TS F +G P + +GL
Sbjct: 161 LMDLTHETYVHATSIGQKEIDEAPVTTRLEGEEVVTSRFMEGIHAPPFWRMALRGAGLPE 220
Query: 393 QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLL 452
D + I F P V+ +G++ G + P +
Sbjct: 221 NALVDRWQI-CRFSLPSHVMIEVGVALAGHGGYHAPADKKVSSVVVDFITPETETSHHYF 279
Query: 453 YRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLG 512
+ M+ FA + + R ++ +EDL ++ QQ+ + + L + D G
Sbjct: 280 WGMARSFA--VGDAALTDTI-REGQGKIFSEDLEMLERQQKNLLAYPDRKLLKLNIDAGG 336
Query: 513 VRYRL 517
VR R+
Sbjct: 337 VRSRM 341
>gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille]
gi|151282074|gb|ABR90484.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 354
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 147/367 (40%), Gaps = 69/367 (18%)
Query: 195 KLPRKSLNVSGPVQPYN----TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDG 250
+L + ++GP P N L+ FW PVA++++L D T + ++ V+ R +G
Sbjct: 3 ELSNIGVTMTGPHDPANHPLYRALRRFWHPVAYASELGD-TPLAVTLLDQSLVLAR-LNG 60
Query: 251 IPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKS 306
+ + + C H+ L LG + +G I+CPYHGW Y GKC ++P+ + + +
Sbjct: 61 VVTALDSRCPHKGTSLALGQIVDGTIECPYHGWRYDDGGKCVRVPAREELCDVLKASVAK 120
Query: 307 LPCFEQEGMIWIWPGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 364
E G+IW+ E P P + + + + L+N +D AH
Sbjct: 121 YHAAEHVGIIWV--ALEEPLYAFPDFPEFEDAEYNVLQGTSYDWATSSPRRLENFVDFAH 178
Query: 365 APFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG--- 421
F H T S P + P+D+ P + + G+ +PG
Sbjct: 179 FSFVHDGTIGSR-SNPRV----------------EPVDVWREGPVLRFNRSGVKEPGVGL 221
Query: 422 --KLEGQNTRQCATHLHQLHVCLPS-----------------------SRKKTRLLYRMS 456
+L G T +++ HV +P + +TR + ++
Sbjct: 222 KKELLGI-TDALIEPVNEYHVTMPHTVHLKRIFPNGKRYVLFMSASPVTATQTRSFWWIA 280
Query: 457 LDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGAN----VWNLPV-GYDKL 511
DF + KH F R F ++VL +D ++ Q+ N A P+ G D +
Sbjct: 281 RDFGTDTKHDAFF----RDFEDEVLGQDKPIIESQRPLWFNLAGGDPAQRETPMRGADVV 336
Query: 512 GVRYRLW 518
+ YR W
Sbjct: 337 TIEYRRW 343
>gi|434391889|ref|YP_007126836.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428263730|gb|AFZ29676.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 349
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 145/354 (40%), Gaps = 40/354 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N L++ W+ LK MV EP V R ++G + N C HRA PL G
Sbjct: 4 NDFLRDVWYYALPGGSLKRGAMVAKTLLGEPIVFARSREGKVFALCNICPHRAVPLSCGR 63
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDE- 323
+ I+C YHGW + G+C ++P S L+ ++K P E +G IWI+
Sbjct: 64 FDGQEIECCYHGWRFDQTGRCTEIPALVEGDSLDLKRFQVKQYPVREVQGNIWIYMASNE 123
Query: 324 ---PPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK- 375
PP + + P + ++V+ L ++H ++ L+D AH F H S + K
Sbjct: 124 RKAPPATDMEVPVVPFFGDKSYQLVVTLHFPCYVDHAII--GLMDPAHISFVHRSWWWKS 181
Query: 376 GWSVPSLVKFLTPASGLQGYWDPYPIDM-EFRPPCMVLS--TIGISKPG-----KLEGQN 427
G S+ VK P+ PY M + P + L IG P +L G
Sbjct: 182 GRSLFEEVKAFDPS--------PYGFTMRRHKIPNVALGYRLIGGGAPETEIAFRLPGVR 233
Query: 428 TRQCATHLH---QLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 484
+T H L P S +T + + + P ++ R F L++D
Sbjct: 234 IEHVSTEHHNVCNLTAVTPLSETETEVTTLLYWTTPWITAIKPLIKPFVRAF----LDQD 289
Query: 485 LRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
++V+ QQE + + + + Y+L + A+ PF P++T+
Sbjct: 290 RQVVIKQQEGLKYDPTLLLIRDADTQARWYYQLKAEFTRAAAEGRPFNNPVKTQ 343
>gi|410461849|ref|ZP_11315486.1| Rieske (2Fe-2S) domain-containing protein [Bacillus azotoformans
LMG 9581]
gi|409925107|gb|EKN62336.1| Rieske (2Fe-2S) domain-containing protein [Bacillus azotoformans
LMG 9581]
Length = 429
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTM-VPFDCFEEPWVIFRGKDGIPGCVQNTC 259
L +GP P + +W P S +LK D E + FR +G G ++ C
Sbjct: 10 LTRTGPGTPMGDLFRLYWIPALKSDELKSDGKPQKIKLLSEDLIAFRDTEGKVGLMEEAC 69
Query: 260 AHRACPLHLGSVNEG-RIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQE 313
HR ++ G +NEG ++C YHGW+++T+G C ++PS + + +KIKS P E +
Sbjct: 70 PHRGTSMYYG-INEGCGLRCMYHGWKFNTNGDCTEIPSEEGDPKFRQKIKIKSYPVKEVK 128
Query: 314 GMIWIWPGDEPPTATIPCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
GMIW + G E P P + + + E + +++N LD HA F H
Sbjct: 129 GMIWTYMGPEEKMPEFPEFYWMGLPDDYVMSERVWQE--CNYAQVMENDLDYVHAAFLHK 186
Query: 371 ST 372
+
Sbjct: 187 AN 188
>gi|27377501|ref|NP_769030.1| vanillate O-demethylase oxygenase [Bradyrhizobium japonicum USDA
110]
gi|27350645|dbj|BAC47655.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 110]
Length = 354
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 126/309 (40%), Gaps = 35/309 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 13 NAWYAAAWDAEVKP-ALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDT 71
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 72 VVCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 129
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------------- 374
P + + + ++ L+LDNL+DL H F H S+
Sbjct: 130 PDMHWNHDPAWAGDGKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 189
Query: 375 -KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
K +V ++ + P G G D + I + F PC + +G++ G +
Sbjct: 190 EKTVTVTRWMRNIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEG 248
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R + L+ P + K + ++ + + R + +ED +
Sbjct: 249 DRSQGVNGFVLNTITPETEKTCHYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELI 305
Query: 488 VLGQQERMN 496
+ QQ M+
Sbjct: 306 LEAQQRAMD 314
>gi|299532713|ref|ZP_07046101.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719348|gb|EFI60317.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 359
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 208 QPYNTRLKNF----WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
QP + L F W+ F+ +LKD V +P V+FR +DG +++ C HR
Sbjct: 6 QPMSAALTAFPLDQWYVAGFAWELKDQP-VARTLLGQPVVLFRTEDGRVAALEDRCCHRE 64
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPG 321
PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WIW G
Sbjct: 65 LPLSCGTVEAAGLRCGYHGLLFSHEGRCLEIPGQERIPAKACVKSFELRERDQILWIWMG 124
Query: 322 DEPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P ++P PP+ + +H++ V + L+ DNLLDL+H + H T
Sbjct: 125 ATPD--SVPDTEPPA-YAVHSDPKYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIG 181
>gi|148253687|ref|YP_001238272.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
gi|146405860|gb|ABQ34366.1| vanillate demethylase subunit A [Bradyrhizobium sp. BTAi1]
Length = 347
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGSIAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG ++S G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFSPQGRCTFMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 377 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEG 243
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R + L+ P + K + + ++ + + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLTEQR---LTTEIREGVSGIFREDELI 300
Query: 488 VLGQQERM--NNGANVWNLPVGYDKLGVR 514
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDANPGRVFYNLNIDAGAMWAR 329
>gi|399078102|ref|ZP_10752702.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034040|gb|EJL27317.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 362
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 183 STSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPW 242
S S++ +D + R ++G P+ T N W+ FS + + P
Sbjct: 3 SVSQKMIDASQ----RAQKRLAGRDTPFVT---NCWYVAGFSWEFSR-ALRARTILGRPL 54
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 300
V++R P + + C HR+ PL +++ I C YHG Y DG+C + P+ Q R
Sbjct: 55 VLYRTAADRPVALSDRCVHRSYPLSASTLDGDTIVCGYHGLRYDADGQCVEAPALQTCPR 114
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC-------LLPPSGFEIHAEIVMELPIEHG 353
V ++S P EQ ++WIW G+ P +P P S H LP +
Sbjct: 115 GVGVRSYPVREQGPLVWIWMGEAPADEALPIGDWVSDPAWPASQQSYH------LPASYI 168
Query: 354 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS 413
L +NLLDL H F H ++F P PY +D+E P VL+
Sbjct: 169 ALHENLLDLTHLSFLHANSFG----TPDFAS------------APYEVDLESTPGRFVLT 212
>gi|311106169|ref|YP_003979022.1| rieske [2Fe-2S] domain-containing protein 5 [Achromobacter
xylosoxidans A8]
gi|310760858|gb|ADP16307.1| rieske [2Fe-2S] domain protein 5 [Achromobacter xylosoxidans A8]
Length = 356
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 131/336 (38%), Gaps = 43/336 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ A+ ++ + + P +++R G +++ C HR PL +G
Sbjct: 3 IKNTWYVAAWDQEVGANGLFSRTIIGVPVLMYRDAAGRLVALEDRCCHRGAPLSVGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHG ++ G C + P+ Q R ++++ P E+ IWIW GD P P
Sbjct: 63 DCVRCMYHGLKFDPTGACVEAPA-QARIPPQARVRTFPVVERHRWIWIWMGD--PERADP 119
Query: 331 CLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG--------- 376
L+P + + H + + + + L+ DNLLD +H PF H +T
Sbjct: 120 ALIPDTQWLDHPDWRSLDGYIHYDVNYLLIADNLLDFSHLPFVHPTTLGGSEDYAAVSPK 179
Query: 377 ------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKP 420
W++ P + + GL W+ Y F P ++L G++
Sbjct: 180 VDRLPDGVRITRWTLNTEAPPFARKVREWPGLVDRWNIY----NFTLPGILLMDSGMAPA 235
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G + R A P + T + +F+ P + +
Sbjct: 236 GNGAQEGNRAGAIEFRGCQALTPETATSTHYFFAHPHNFS---IDQPEVTASIHQSVVEA 292
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ED ++ QQ ++ + +P+ D ++R
Sbjct: 293 FDEDRDIITAQQRSLSLAPDFKMVPLSIDAALSQFR 328
>gi|429210389|ref|ZP_19201556.1| vanillate monooxygenase [Pseudomonas sp. M1]
gi|428159163|gb|EKX05709.1| vanillate monooxygenase [Pseudomonas sp. M1]
Length = 352
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 130/336 (38%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +RG +G +++ C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIADKPLGRQVCGEK-MVFYRGPEGRVAALEDFCPHRGAPLSLGFVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG +G E MP ++R I+ E+ G IW+WPGD P L+
Sbjct: 63 KLICGYHGLAMGCEGHTESMPGQRVRGFPAIRKFAVEERYGFIWVWPGD--AAQADPALI 120
Query: 334 PPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
+ + + + ++ L++DNL+DL H + H ++ +
Sbjct: 121 HHLEWADNPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHANSIGQKEIDEAAPKTRVE 180
Query: 376 GWSV-----------PSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
G V P + +GL D P+D F PP VL +G++
Sbjct: 181 GEEVITERHMQNVMAPPFWRLALRGNGLA---DDVPVDRWQICRFTPPSHVLIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
G Q + P S + M+ +F + R ++
Sbjct: 238 GHGGYHAPAQHKAASIVVDFITPESETSIWYFWGMARNFQP---QDAALTATIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ+ + L + D GV+ R
Sbjct: 295 FGEDLEMLEQQQQNLLRHPQRQLLKLNIDAGGVQSR 330
>gi|297746464|emb|CBI16520.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 142/349 (40%), Gaps = 67/349 (19%)
Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
W+PVA DL D +V +D E W +F + CAHR PL
Sbjct: 128 WYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVF----------DDACAHRLAPL 177
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 317
G +++ GR+QC YHGW ++ G C+ +P + + P Q G++W
Sbjct: 178 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQHGIVW 237
Query: 318 IWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHT 370
WP +P I P +P + + + + P + +L++N++D AH + H
Sbjct: 238 FWPNTDPQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMDPAHVAYAHY 297
Query: 371 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDME-------FRPPCMVLSTIGI----SK 419
+ P ++ S + G+ D E F PPC+ + + S
Sbjct: 298 GIADREGGTP--IEISVKRSAIDGF------DAERELARSKFIPPCLYYTCLDFPAYQSN 349
Query: 420 PGKLEGQNTRQCATHLHQ-----LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 474
G + ++H+ + +C+P S +RL++ +F H+ +++
Sbjct: 350 ESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTDHI-IPRWMLH 408
Query: 475 HFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLW 518
+L+ DL L+ L +++ M G + W+ +P D V +R W
Sbjct: 409 MSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKSDAHIVAFRAW 457
>gi|87199506|ref|YP_496763.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135187|gb|ABD25929.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 40/275 (14%)
Query: 211 NTR-LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
NTR L+N W+ A S++++ + + +I+R DG P +++ C HR PLH+G
Sbjct: 8 NTRYLENAWYVAALSSEVQGQALFHRKILDISVMIYRLSDGSPTALRDRCPHRFAPLHMG 67
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT 326
I C YH +++ G C P +++ P E+ G IWIW G++
Sbjct: 68 KREGDEISCFYHALRFNSVGTCTHNPHGNGNIPDGANVRAFPLLERHGFIWIWMGEQ--- 124
Query: 327 ATIPCLLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
P LLP SG M + L++DN++DL+H H + +G
Sbjct: 125 TADPDLLPDFSPLEDSGPNAVGYTYMHMDANFELIVDNVMDLSHIDHVHGEIISTRGKLS 184
Query: 380 PSLVKFLTPASGLQGYWD--------------PYP-------IDMEFRPPCMVLSTIGIS 418
P + K + + + W+ P P D+ + PP + ++
Sbjct: 185 PKIPKIRSTSRSISSRWEWEQQPAMLILAPFLPAPDAEARQYFDITWTPPANIQLSV--- 241
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
G ++G+ + A + LH P ++ T +
Sbjct: 242 --GAVQGELSFDEAVMQYDLHTATPETQFTTHYFF 274
>gi|359462313|ref|ZP_09250876.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 488
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 150/365 (41%), Gaps = 38/365 (10%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHR 262
+G P + W+P+A+ DL + + F + VI+ + V + C HR
Sbjct: 36 AGGNDPNRFDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHR 95
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-STQLRNVK------IKSLPCFEQEG 314
L G ++E G I+CPYHGW +S G CE++P R+ + + SLP Q+G
Sbjct: 96 LARLSEGRIDEDGLIECPYHGWAFSGTGDCERIPQQVSGRSAESSPRACVDSLPISIQQG 155
Query: 315 MIWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTH 369
+++ + G A P ++ P I++ +LP + LL+N+LD +H P+TH
Sbjct: 156 LLFAYAGQPERAALTPVPIVGPIEESPDDWIILDGFRDLPYDVLTLLENVLDPSHLPYTH 215
Query: 370 TSTFAKGWSVPSLVKFLTPASGLQGY---WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
+ S V+ SG QG+ W+ P R + T PG +
Sbjct: 216 HRSVGNR-SNAGPVELEVMESGKQGFYGVWEEGP-----RQGKLGTQTTTFVAPGLMWHD 269
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVL 481
T + P + + R+ R F+S ++ H P + H + +
Sbjct: 270 LTSSQFGRTLTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTP---TWFSHLGQNAI 326
Query: 482 NEDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKP 534
ED ++ L QER + A + LP D+ + W++ + + P
Sbjct: 327 LEDDQIFLHFQERYLERTKDSKSIAQAFYLPTRADRFVLALHQWQERFQADPFPGQSLPP 386
Query: 535 MQTRK 539
+TR+
Sbjct: 387 ERTRE 391
>gi|427704111|ref|YP_007047333.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347279|gb|AFY29992.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 361
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 215 KNFWFPVAFSTDL-KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ VA S K VPF + +V+F +G+P + C HR L LG + E
Sbjct: 20 QNCWYAVASSFAFRKGPVAVPFAGHD--FVLFPDAEGLPRLFSDRCPHRGASLALGQLEE 77
Query: 274 GR-IQCPYHGWEYSTDGKCEKMP------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
G ++CP+HGW+++ DG C + P S R+ + P E G IW+W G PP
Sbjct: 78 GGCLRCPFHGWKFAADGTCLEAPAEPAGASPPARSDLVGERPAVESRGFIWMWWGSGPPD 137
Query: 327 ATIPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P LLP P H E + + ++++ LD +HA + H TFA
Sbjct: 138 ---PALLPDLPVFPDEAWGHVESSFDWETHYSRVIESNLDNSHAYWVHKGTFAS 188
>gi|428316589|ref|YP_007114471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428240269|gb|AFZ06055.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 356
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 204 SGPVQPYNTRLKNF------WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 257
SG V+ T ++ W+ +A ST++++ + + V+FR G +++
Sbjct: 8 SGSVRGQKTHIRQLGINLDRWYAIARSTEVQNQPLAA-KIWNRAIVLFRDSSGKINALED 66
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQE 313
C HR L G V I+C YHGW + G+C ++ + +L N KI+S P E+
Sbjct: 67 RCPHRQVKLSHGQVKGDLIECAYHGWRLNARGECAEVDYLAENQKLPNCKIRSYPVKEKN 126
Query: 314 GMIWIWPGDEPPTATIPCLLPPSGFE----IHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
G IW++PGDE I LL S +E I V++ + L++NL+D+ H H
Sbjct: 127 GFIWLFPGDETQAEKID-LLDLSEWEHLNYIATVSVIDCQAHYSFLIENLMDMYHG---H 182
Query: 370 TSTFAKGWSVPSL 382
+ W+ P L
Sbjct: 183 LHDDWQAWANPVL 195
>gi|22299237|ref|NP_682484.1| Rieske 2Fe-2S family protein [Thermosynechococcus elongatus BP-1]
gi|22295419|dbj|BAC09246.1| Rieske 2Fe-2S family protein [Thermosynechococcus elongatus BP-1]
Length = 357
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 140/353 (39%), Gaps = 39/353 (11%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N+ L+N W+ + DLK EP + R G P ++N C HR PLH G
Sbjct: 14 NSFLRNIWYYGLPAADLKPGRCQAKVLLGEPILFCRTTSGKPFALRNLCPHRGMPLHYGR 73
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWI-WPGD- 322
+ ++CPYHGW ++ G C +PS L+N + S P E +G +WI +P +
Sbjct: 74 FDGKEVECPYHGWRFNAHGHCTLIPSLTSDSDVDLKNFGVLSYPVREVQGNLWIFFPANG 133
Query: 323 ---EPPTATIPCLLPPSGFEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
PT +P L+P E + V + P + N +D +HAPF H + W
Sbjct: 134 RNVSEPTLEVP-LVPGFSAETQPQAVQKFIFPGHLDQVFINFMDPSHAPFVHGA-----W 187
Query: 378 SVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---------KLEGQNT 428
K A DP P R ++ + G +L G
Sbjct: 188 WWRKRGKLFEKAKTF----DPSPYGFTMRRHPLLRKSWAHHLLGGHPEVEIIYRLPGIRI 243
Query: 429 RQCATHLHQ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
+ H L P + ++T L F + P + L R F LN+DL
Sbjct: 244 ETNYSDRHTFCFLITLTPINDQETELTATYYWTFPWLAPLKPLLAPLAREF----LNQDL 299
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
R+V Q E + + + + Y+L R+ + ++ F+ P++T+
Sbjct: 300 RIVAKQSEGLKYKPPLTLIKEADYQAKWYYQLKREYEKATQEEREFVNPLKTQ 352
>gi|434395181|ref|YP_007130128.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428267022|gb|AFZ32968.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 369
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 35/233 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ V+++ LK ++P +++ ++R +G +++ C H+ LH G V+
Sbjct: 24 NHWYAVSWANQLKPGDIIPVVIWQQAIAVYRDINGQLHALEDFCPHKGVALHKGKVHGCN 83
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+ C YHGWE+ ++G C K+P +L ++S P E+ +IWI+PG+ AT C
Sbjct: 84 LACAYHGWEFDSEGSCVKIPYLPEKQKLPRASVRSYPIQEKYNLIWIFPGEPHLAAT--C 141
Query: 332 LLP--PSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
LP P FE +V + +N +D+ H F H +GW P L+
Sbjct: 142 QLPHIPEFFETEWLVVPISAHFQAHFSICNENTMDVFHG-FLHQGL--QGWFDPVLLSLK 198
Query: 387 TPASGLQGYWD---------------------PYPIDMEFRPPCMVLSTIGIS 418
+ ++ ++ PI +E+R P S G+S
Sbjct: 199 ETENSVRAEYNVSYKGHMAKFLGLSDRADTVTTLPITVEYRYPHYATSLQGVS 251
>gi|264680321|ref|YP_003280231.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
gi|262210837|gb|ACY34935.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
Length = 359
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 208 QPYNTRLKNF----WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
QP + L F W+ F+ +LKD V +P V+FR +DG +++ C HR
Sbjct: 6 QPTSAALPAFPLDQWYVAGFAWELKDQP-VARTLLGQPVVLFRTEDGRVAALEDRCCHRE 64
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPG 321
PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++WIW G
Sbjct: 65 LPLSCGTVEAAGLRCGYHGLLFSHEGRCLEIPGQERIPAKACVKSFELRERDQILWIWMG 124
Query: 322 DEPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P ++P PP+ + +H++ V + L+ DNLLDL+H + H T
Sbjct: 125 ATP--DSVPGTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIG 181
>gi|148554605|ref|YP_001262187.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499795|gb|ABQ68049.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 357
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 19/186 (10%)
Query: 207 VQPYNTRL----KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
VQPY +N W+ AFS ++ + M + V +R + G P + + C HR
Sbjct: 6 VQPYYPGTLPAPRNAWYVCAFSDEVGERPMSR-RILGDRIVFYRTEAGDPVALADYCPHR 64
Query: 263 ACPLHLGSVNEG-RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIW 319
A L G EG RIQC YHG E+ DG C ++PS + R + +S P E+ IWIW
Sbjct: 65 AVALSHGKRVEGDRIQCIYHGMEFGPDGHCRRVPSQKAVPRAMATRSYPLAERWRWIWIW 124
Query: 320 PGDEPPTATIPCLLP---------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
GD P A L+P GF M++ LL +NLLD++H F H
Sbjct: 125 MGD--PDAADESLIPDHSTFGLGEDDGFYKIQRFRMDIGGSFQLLHENLLDVSHITFLHE 182
Query: 371 STFAKG 376
F G
Sbjct: 183 GMFDSG 188
>gi|421604687|ref|ZP_16046796.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
gi|404263204|gb|EJZ28775.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
Length = 343
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 127/315 (40%), Gaps = 47/315 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 2 NAWYAAAWDAEVKP-ALLPRTICGKHIVMYRKADGSVAALEDACWHRLVPLSKGRLEGDT 60
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +Y+ G+C MPS + N +++ P E+ IW+W GD P P L+
Sbjct: 61 VVCGYHGLKYNAQGRCTFMPSQETINPSACVRAYPVVERHRYIWLWMGD--PALADPALV 118
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-------- 374
P G IH + ++ L+LDNL+DL H F H S+
Sbjct: 119 PDMHWNHDPAWAGDGKTIHVK------CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAP 172
Query: 375 -------KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
K +V ++ + P G G D + I + F PC + +G++ G
Sbjct: 173 FDVTHGEKTVTVTRWMRDIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTIAIDVGVAPTG 231
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ R + L+ P + K + ++ + + R +
Sbjct: 232 TGAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIF 288
Query: 482 NEDLRLVLGQQERMN 496
+ED ++ QQ M+
Sbjct: 289 HEDELILEAQQRAMD 303
>gi|254430294|ref|ZP_05043997.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
gi|197624747|gb|EDY37306.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
Length = 330
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L NFW+ V S+ LKD ++++R G P + C HR G V
Sbjct: 5 LSNFWYAVEHSSTLKD-APCQATLLNRTYILYRDDTGQPHAAVDQCPHRGASFKAGWVEG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
++CPYHGW + +G C ++P+ Q ++ +LP E G +WI+PGD P+
Sbjct: 64 SCLRCPYHGWSFDAEGHCVRIPADQPGVPIPAQARLHTLPVQESSGFVWIFPGD--PSLA 121
Query: 329 IPCLLPPSGFEIHAEIVMELPIEH------GLLLDNLLDLAHAPFTHTSTF 373
P L+ P+ E+ AE + E+ ++++ LD +HAPF H F
Sbjct: 122 DPSLI-PAFPELGAEGWRPVSGEYLWHANFSRVVESGLDTSHAPFVHKPFF 171
>gi|329847866|ref|ZP_08262894.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
gi|328842929|gb|EGF92498.1| rieske 2Fe-2S domain protein [Asticcacaulis biprosthecum C19]
Length = 351
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 51/219 (23%)
Query: 176 DQTCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPF 235
DQT S S ++++ +V G+ LK+ W+ A S DLK + F
Sbjct: 3 DQTTTSASRAEKTERVVFGQ----------------GFLKDCWWFAALSGDLKPGKLQRF 46
Query: 236 DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGR---IQCPYHGWEYSTDGKC 291
EP ++ R DG +++ C HRA PL G V +G +QCPYHGW ++T+G C
Sbjct: 47 VFLGEPVLLGRDLDGKVYGIRDICPHRAAPLSAGQMVRDGSACVVQCPYHGWTFNTEGTC 106
Query: 292 EKMPS------TQLRNVKIKSLPCFEQEGMIWIW----------PGDEPP-----TATIP 330
+PS + +K+++ EQ+G++WI+ P EPP P
Sbjct: 107 TSVPSLTPDQEMDVNRIKVRNYTVREQQGIVWIYITADARRPTEPDHEPPVLPGVVGGNP 166
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
++ F+ H I+H ++ L+D AH P+ H
Sbjct: 167 IIVETMDFDSH--------IDHAVV--GLMDPAHGPYVH 195
>gi|339323059|ref|YP_004681953.1| LysR family transcriptional regulator [Cupriavidus necator N-1]
gi|338169667|gb|AEI80721.1| vanillate O-demethylase oxygenase subunit [Cupriavidus necator N-1]
Length = 351
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 127/337 (37%), Gaps = 45/337 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ + ++ + P +++R +DG +++ C HR PL +G
Sbjct: 3 VRNTWYVAGWDKEVGASDLFSRTIIGIPVLMYRAEDGTLVAIEDRCCHRGAPLSVGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG ++ G+C + P+ Q ++++ P E+ IWIW GD A P
Sbjct: 63 DCVRCMYHGLKFDPTGQCIEAPAQQRIPPQARVRTFPVVERNSWIWIWMGDA--EAADPA 120
Query: 332 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-------- 376
L+P P+ + I + + + L+ DNLLD +H PF H +T
Sbjct: 121 LIPDTHWLDDPAWRSLDGYIHYD--VNYLLIADNLLDFSHLPFVHPTTLGGSEDYAGVQP 178
Query: 377 -------------WSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
W++ P K + G W+ Y F P ++L G++
Sbjct: 179 TVERLEDGVRITRWTIDTEAPPFAKQVKDWPGKVDRWNIY----NFTLPAILLMDSGMAP 234
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R A P + T + +FA P +
Sbjct: 235 TGTGAQEGRRIDAAEFRGCQALTPETENSTHYFFAHPHNFAI---DQPEVTRSIHQAVVA 291
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ED ++ QQ + + +P D ++R
Sbjct: 292 AFDEDRDIITAQQRSLALAPDFKMIPFSIDAALSQFR 328
>gi|427718313|ref|YP_007066307.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427350749|gb|AFY33473.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 351
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
N L+N W+ S +K MV EP ++ R +DG +++ C HRA PL G
Sbjct: 6 NFLLRNIWYYALPSYQIKPGKMVSRTFLGEPVLLVRSQDGKVSALRDICPHRAVPLSCGR 65
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD-- 322
+ ++C YHGW + G+C +PS T L +KS E +G IWI+ D
Sbjct: 66 FDGQEVECCYHGWRFDPAGRCTAIPSLVAGQETDLSRFNVKSYEIREAQGNIWIYMADPD 125
Query: 323 --EPPTA--TIPCLLPPSGFEIHAEI---VMELPIEHGLLLDNLLDLAHAPFTH 369
+PP + IP + +GFE + VM P + L+D AH+P+ H
Sbjct: 126 NPQPPDSEIEIPVI---AGFEERSPQLVEVMRFPCFVDHAVTGLMDPAHSPYVH 176
>gi|420241041|ref|ZP_14745210.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF080]
gi|398073019|gb|EJL64206.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF080]
Length = 427
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAH 261
+GP P + +W P +T+L D V E + F+ DG G + CAH
Sbjct: 13 TGPGTPMGNLFRRYWLPALMATELPGPDCDPVRVSLLSERLIAFKDSDGKIGMMDEFCAH 72
Query: 262 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMI 316
R L G EG ++CPYHGW+Y T G+C ++PS + +K+KS PC E G+I
Sbjct: 73 RGVSLWFGRNEEGGLRCPYHGWKYDTTGQCVEVPSEPASSGFCQKIKLKSYPCVELGGVI 132
Query: 317 WIWPGDEPPTATIPCL 332
W + G +P
Sbjct: 133 WTYMGPPEEQPEVPAF 148
>gi|21224976|ref|NP_630755.1| oxidoreductase subunit alpha [Streptomyces coelicolor A3(2)]
gi|3334811|emb|CAA19959.1| oxidoreductase alpha subunit [Streptomyces coelicolor A3(2)]
Length = 359
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 145/339 (42%), Gaps = 46/339 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + ++ EP V++R + DG P + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LLGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRL 67
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ RI C YHG+ Y T G C +P + R ++ S P E++ ++W+W GD P
Sbjct: 68 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVAERDSLVWVWIGD--PALAD 125
Query: 330 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 369
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 PEAVPRARHLDAPGWVTVRG---MEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAET 182
Query: 370 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
T+ +G + + + F ++G+ G D + D+E+ PC+ + ++
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQ-DIEYHAPCLYVLHSRVA 241
Query: 419 KPGKLEGQNTRQC-ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
G + + H + PS K + +S D+A+ V ++L++
Sbjct: 242 PTGTVPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEV--TEFLYKSNR 299
Query: 478 EQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V+ + L L Q+ A L + D G+ R
Sbjct: 300 TVVMQDVDALNLLQRTLGGERAGYQELSINIDTGGLAAR 338
>gi|345008760|ref|YP_004811114.1| Rieske (2Fe-2S) domain-containing protein [Streptomyces
violaceusniger Tu 4113]
gi|344035109|gb|AEM80834.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Streptomyces
violaceusniger Tu 4113]
Length = 362
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 122/279 (43%), Gaps = 38/279 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A+ ++ + ++ EP +R + D + + C HR PL G ++
Sbjct: 15 RNQWYVAAYGREIGRE-LLGRTILNEPIAFYRAESDDTVIALADRCVHRRYPLTAGRLDG 73
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD----EPPTA 327
+ C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD +P +
Sbjct: 74 DTVVCGYHGFTYDTGGTCVFVPGQKRVPRTARVPSYPVVEQDSLVWVWIGDPALADPRSV 133
Query: 328 -TIPCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH--------------TS 371
P L P + ME + ++GLL+DNLLDL+H + H T+
Sbjct: 134 PRAPWLADPRWTTVGG---MEPIDADYGLLVDNLLDLSHETYLHSGYIGTAEVAETPITT 190
Query: 372 TFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
+G V + + F ++G+ G + D+E+ PC+ L I+ G
Sbjct: 191 EVDEGAGVVRVSRHMDDAECPPFYARSTGIDGRITRWQ-DIEYHAPCLYLLHSRIAPAGV 249
Query: 423 L-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
L + A H+ + PS+ + + +S DFA
Sbjct: 250 LPRPDGSDPDAFHVEITYAITPSTDRHVYDFWAVSRDFA 288
>gi|21224238|ref|NP_630017.1| oxidase [Streptomyces coelicolor A3(2)]
gi|2815311|emb|CAA16434.1| putative oxidase [Streptomyces coelicolor A3(2)]
Length = 395
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 12/191 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+P+ + ++ +D + + V++R DG C C H+ L G +
Sbjct: 2 IPNQWYPIVEAQEVGNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
I+CPYHG+ Y DG C +P+ ++ R ++++ + P EQ G++W+W GDE PTA
Sbjct: 62 NTIECPYHGFRYGADGACRVIPAMGSEARIPGSLRVPTYPVREQFGLVWMWWGDERPTAD 121
Query: 329 IPCLLPPSGF----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
+P + P+ +++A P+ + +++LL+ H + H + + L+
Sbjct: 122 LPPVAAPAEVTDNRKLYATKRWTRPVHYTRYIESLLEFYHVTYVHRDHWFN--YIDYLLL 179
Query: 385 FLTPAS-GLQG 394
+ TP+ GL G
Sbjct: 180 YGTPSKFGLDG 190
>gi|407941245|ref|YP_006856886.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. KKS102]
gi|407899039|gb|AFU48248.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax sp. KKS102]
Length = 351
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 133/340 (39%), Gaps = 39/340 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +R + + C HR PL LG+V EG
Sbjct: 4 KNAWYVACTPDEIADKPLGRTICGEK-IVFYRPAPDQVAALDDFCPHRGAPLSLGTVCEG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPG--DEPPTATIPC 331
+QC YHG GK MP +++ K +S P E+ G IW+WPG D+ ATI
Sbjct: 63 HLQCGYHGLRVECTGKSVSMPGQRVQGFPKARSFPVVERYGFIWVWPGDADKADPATIHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
L + E + + + ++ L++DNL+DL H + H
Sbjct: 123 LPWANNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHSTSIGQKEIDEVPCKTRVEGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
TS F +G P K +GL D +D F PP VL +G++ G
Sbjct: 183 EVITSRFMEGIEAPPFWKMALRMNGLP---DDQLVDRWQICHFTPPSHVLIEVGVALAGH 239
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
+ P + + M+ +F P + R ++
Sbjct: 240 GGYNAPADKKASSIVVDFITPETETSIHYFWGMARNFKP---QDPSLTTQIRDGQGKIFA 296
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 522
ED +++ QQE + + L + D GV+ R D L
Sbjct: 297 EDQQMLELQQENLLRYPDRKLLMLNIDAGGVQSRKILDRL 336
>gi|340786276|ref|YP_004751741.1| Rieske (2Fe-2S) domain-containing protein [Collimonas fungivorans
Ter331]
gi|340551543|gb|AEK60918.1| Rieske (2Fe-2S) domain protein [Collimonas fungivorans Ter331]
Length = 344
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
++N W+ A S ++K + PF E V++R +++ CAHR PL G +
Sbjct: 3 IQNAWYAAALSGEIKSE---PFARTILNEKIVMYRTSANQVVALEDRCAHRQVPLSRGRL 59
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPG--DEPPTA 327
+QC YHG Y G+C +P ST + +++S P E+ G +W+WPG D+ +
Sbjct: 60 IGDELQCWYHGLRYDCSGECVNIPSQSTIPKGARVRSFPAVEKHGFVWLWPGDPDQADES 119
Query: 328 TIPCLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
IP S E+ + + + +DN+LD++HA F H T
Sbjct: 120 AIPNHWVCSAPELAGTMSYCTIACNYVFGIDNILDISHAAFVHAKTLGS 168
>gi|443326458|ref|ZP_21055111.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442793912|gb|ELS03346.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 435
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 134/329 (40%), Gaps = 41/329 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE--G 274
W+P+ D+ +P P VI++ + C HR PL G +++
Sbjct: 10 WYPLVPIEDINPQKPLPATLLGIPLVIWKPSSSQTYQVFLDRCPHRLAPLSEGRIDDKTD 69
Query: 275 RIQCPYHGWEYSTDGKCEKMP--------STQLRNVKIKSLPCFEQEGMIWIWPGDEPPT 326
+ C YHGW++ T G C ++P + + +N PC ++ ++W+W P
Sbjct: 70 NLMCSYHGWQFETKGNCTRIPQADNPELIAKKSQNFCATVFPCRQENDLLWVWMDASSPE 129
Query: 327 ATIPCLLPPS-------GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---KG 376
LP S GF + + +V +L + L++N+ D +H PF H +
Sbjct: 130 IAAITALPLSPQIDASKGF-VWSSMVRDLEYDWQTLVENVADPSHVPFAHHGIQGNRDRA 188
Query: 377 WSVPSLVKFLTPASGLQGYWD-PYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 435
+P L + ++ D P+ + F PPC + + K G T
Sbjct: 189 HPIP-LDIIRSEIDLIEAKVDKPFKTTITFEPPCRLEYALTFGDEIKKIGLIT------- 240
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQE-- 493
C+P S K+R++ + S +FA+ L + W H + L D +VL Q+
Sbjct: 241 ----YCIPVSPGKSRIVAQFSRNFATKLHKL--TPRWWDHIQNRNLILDGDMVLLHQQES 294
Query: 494 --RMNNGANVWNLPVGYDKLGVRYRLWRD 520
+ N + +P D+L + +R W D
Sbjct: 295 FLQHTNWKTAYKMPTSADRLVIEFRSWFD 323
>gi|58040226|ref|YP_192190.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter oxydans
621H]
gi|58002640|gb|AAW61534.1| Bacterial ring hydroxylating dioxygenases alpha subunit
[Gluconobacter oxydans 621H]
Length = 390
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+PVA+S +LK + +P + R DG +++ CAHR PL LG V+
Sbjct: 51 DYWYPVAWSRELKRGKTIGTRYAGQPIALVRPMDGSVFALEDRCAHRQVPLSLGKVSGEA 110
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD + P
Sbjct: 111 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPAKAESTP-- 167
Query: 333 LPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSVP 380
P G + E + + + +NL+D+ H F H F G P
Sbjct: 168 FPQLGSVGNPEYKTRRFGETVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGRDEP 226
Query: 381 SLVK 384
+LV+
Sbjct: 227 TLVE 230
>gi|260427622|ref|ZP_05781601.1| rieske domain protein [Citreicella sp. SE45]
gi|260422114|gb|EEX15365.1| rieske domain protein [Citreicella sp. SE45]
Length = 356
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 107/264 (40%), Gaps = 31/264 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +ST++ DD + F E V+FR DG +++ C HR PL G
Sbjct: 5 VKNAWYVAGWSTEI-DDELRRFTILGEHVVMFRTSDGSVAALEDRCPHRLLPLSKGKRIG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDEP---PTAT 328
+QC YHG + G C ++P T L ++ +++ P E+ G++WIW GD P A
Sbjct: 64 DTVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVEAYPIVEKHGIVWIWMGDAEKADPEAV 123
Query: 329 --IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 384
+P P G+ H + L + + +NL+D AH F H +T S VP V+
Sbjct: 124 FDMPEFTDP-GWAAHHGDALHLKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQ 182
Query: 385 -------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
F G G D + PC + G + K
Sbjct: 183 TEGEAIVAWRWIRDAEPIGFFKAFGGFTGNVDRWHY-YYLYTPCTAVIDFGSIETEKHCA 241
Query: 426 QNTRQCATHLHQLHVCLPSSRKKT 449
+ R + LH P + T
Sbjct: 242 EEDRDQGVRIFALHFMTPVTETYT 265
>gi|418516298|ref|ZP_13082473.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707099|gb|EKQ65554.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 358
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLCGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|418520159|ref|ZP_13086209.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704113|gb|EKQ62598.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 358
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKLCNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLCGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS N ++S P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQDTINPSACVRSFPVAEKHRYVWIWPGDPAKADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|295699780|ref|YP_003607673.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438993|gb|ADG18162.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 354
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 131/342 (38%), Gaps = 55/342 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A+S ++ DD + P +++R DG +Q+ C HR PL +G
Sbjct: 3 IRNTWYVAAWSHEVTDDALFSRTIIGTPVLLYRTTDGQLVALQDRCCHRGAPLSVGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHG ++ G C + P+ Q R ++S P E+ IWIW GD P P
Sbjct: 63 DCVRCLYHGLKFDARGTCVEAPA-QPRIPPKATVRSYPVVERHRWIWIWMGD--PMLADP 119
Query: 331 CLLPPSGF-----------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA----- 374
+P + + IH + + + L+ DNLLD +H PF H T
Sbjct: 120 ATIPDTHWLDDPAWRCLPGYIHYD------VNYLLICDNLLDFSHLPFVHPGTLGGPETY 173
Query: 375 ----------------KGWSV----PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 414
W++ PS + G W+ Y +F P ++L
Sbjct: 174 ADVRPTVERLDNGVRISRWTMDTQAPSFAAAVKHWPGNVDRWNLY----DFTIPGILLMD 229
Query: 415 IGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWR 474
G++ G + R A P + T + +FA ++ Q +
Sbjct: 230 SGMAPVGTGAREGKRVDAAEFRSCQALTPETETSTHYFFAQPHNFA--IEQPEVTQSIHE 287
Query: 475 HFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
E ED ++ Q+ ++ + + G D ++R
Sbjct: 288 AIVE-AFAEDRAIITAQRRNLSLDPDFKMMAFGIDSALSQFR 328
>gi|134099364|ref|YP_001105025.1| oxidoreductase subunit alpha [Saccharopolyspora erythraea NRRL
2338]
gi|291007249|ref|ZP_06565222.1| oxidoreductase alpha subunit [Saccharopolyspora erythraea NRRL
2338]
gi|133911987|emb|CAM02100.1| oxidoreductase alpha subunit [Saccharopolyspora erythraea NRRL
2338]
Length = 354
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 138/361 (38%), Gaps = 54/361 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG--SVN 272
+N W+ A+ T++ D C EP + +R + G + C HR PL +
Sbjct: 6 RNQWYVAAYGTEIGRDLFARTIC-GEPILFWRTESGTVTANSDRCVHRRFPLSQAPSRLV 64
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++ C YHG+ Y DGKC +P R ++ P EQ+ +W+W GD P P
Sbjct: 65 GDQVVCGYHGFTYGPDGKCVAVPGQARVPRTARLTPYPVVEQDSFVWVWIGD--PALADP 122
Query: 331 CLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK- 384
+P + + A+ +E LL+DNLLDL+H + H + +
Sbjct: 123 ARIPRAPYLDSADYTTVCGLEPLRARFSLLVDNLLDLSHETYLHGGYIGTPEVADTPIST 182
Query: 385 ----------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
F ++GL G + D+E+ PPC+ I+ G
Sbjct: 183 EVDDDAGIVYVSRHMDDAECPPFYAKSTGLAGRISRWQ-DIEYTPPCLYKLHSRIAPVGS 241
Query: 423 LEGQN-TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ + T A H+ ++ P + T + ++ DFA L H + L
Sbjct: 242 VPNPDGTDPDAFHVEVVYAITPETEHSTHDFWAVARDFA-----------LDDHEVSEFL 290
Query: 482 NEDLRLVLGQQERMNNGAN--VWNLPVGYDKLGVRYRLW----RDALEKGAKQLPFMKPM 535
E+ R V+ Q N V P GY +L + R L + A Q P P
Sbjct: 291 AENNRTVVLQDVEALNVLEQVVQTEPPGYQELSINIDTGGLAARRMLARMAGQTPRNAPA 350
Query: 536 Q 536
+
Sbjct: 351 E 351
>gi|359780082|ref|ZP_09283308.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
gi|359371394|gb|EHK71959.1| vanillate monooxygenase [Pseudomonas psychrotolerans L19]
Length = 352
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 136/357 (38%), Gaps = 54/357 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + EP V +R G +++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEVQDKPLGRQICGEPLVFYRDAKGQVVALEDFCPHRGAPLSLGFVRDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG E GK MP ++ ++ E+ G +W+WPGD+ P L+
Sbjct: 63 TLVCGYHGLEMGCGGKTLGMPGQRVGVFPAVRPYAAVERHGFVWVWPGDQ--AKADPTLI 120
Query: 334 P-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------- 375
P S + + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 PHLEWAESPDWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPATRVE 180
Query: 376 -----------GWSVPSLVKFLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKP 420
S P + +GL D P+D F PP V+ +G++
Sbjct: 181 GDEVITSRHMENISAPPFWRMALRGNGLA---DDVPVDRWQICRFTPPSHVMIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF----ASVLKHVPFMQYLWRHF 476
G + P + + M+ +F A + + R
Sbjct: 238 GHGGYDAPAAVKAASVVVDFITPETETSIWYFWGMARNFKPDDAELTASI-------REG 290
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRD---ALEKGAKQLP 530
++ EDL ++ QQ+ + L + D GV+ R D A E+ A +P
Sbjct: 291 QGKIFGEDLEMLERQQQNLLRYPERGLLKLNIDAGGVQSRQIIDRLLAAEQAATGIP 347
>gi|421674174|ref|ZP_16114109.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|421690706|ref|ZP_16130374.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|445487023|ref|ZP_21457644.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
gi|404564084|gb|EKA69276.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-116]
gi|410384935|gb|EKP37433.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC065]
gi|444769250|gb|ELW93447.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AA-014]
Length = 358
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|405377776|ref|ZP_11031712.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium sp. CF142]
gi|397325682|gb|EJJ30011.1| Rieske (2Fe-2S) domain-containing protein [Rhizobium sp. CF142]
Length = 427
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQNT 258
L+ +GP P + +W P +++L D V E + F+ +G G +
Sbjct: 10 LSRTGPGTPMGDLFRRYWIPALMASELPGPDCDPVRVSLLSERLIAFKDTNGKIGLMDEF 69
Query: 259 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQE 313
CAHR L G EG ++CPYHGW+Y T G+C ++PS + + +K+KS PC E
Sbjct: 70 CAHRGVSLWFGRNEEGGLRCPYHGWKYDTTGQCVEVPSEPVSSGFCQKIKLKSYPCVEFG 129
Query: 314 GMIWIWPGDEPPTATIPCL 332
G+IW + G E +P
Sbjct: 130 GVIWTYMGPEEHQPELPVF 148
>gi|410090976|ref|ZP_11287555.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
gi|409761697|gb|EKN46751.1| Rieske (2Fe-2S) protein [Pseudomonas viridiflava UASWS0038]
Length = 354
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 43/336 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R +D +++ C HR PL LG V G
Sbjct: 4 KNTWY-VACAADEVTDKPLGRQICNEKMVFYRDQDQQIVALEDFCPHRGAPLSLGFVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPG--DEPPTATIPC 331
++ C YHG DG+ MP ++R K+ E+ G IW+WPG D A IP
Sbjct: 63 QLVCGYHGLVMGGDGQTVAMPGQRVRGFPCNKTFAAIERYGFIWVWPGERDRADAALIPH 122
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS 390
L S + + + ++ L++DNL+DL H + H S+ + + P +
Sbjct: 123 LEWAVSDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPPVT 177
Query: 391 GLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGISKP 420
++G +W D P+D F PP V +G++
Sbjct: 178 TVEGEEVVTARHMENIMPPPFWQMALRGNNLADDVPVDRWQICRFTPPSHVHIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK R+ + P + + M+ +F + R ++
Sbjct: 238 GKGGYNAPREFKASSIVVDFITPETDTSIWYFWGMARNFNP---QDEALTASIREGQGKI 294
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQ+ + + L + D GV+ R
Sbjct: 295 FTEDLEMLERQQQNLLQHPHRKLLKLNIDAGGVQSR 330
>gi|418472321|ref|ZP_13042068.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
gi|371547060|gb|EHN75473.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
Length = 384
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 12/191 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+P+ + ++++D + + V++R DG C C H+ L G +
Sbjct: 2 IPNQWYPIVETQEVRNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
I+CPYHG+ Y DG C +P+ Q R ++++ + P EQ G++W+W GDE P A
Sbjct: 62 NTIECPYHGFRYGADGACRVIPAMGAQARIPGSLRVATYPVREQFGLVWMWWGDERPAAD 121
Query: 329 IPCLLPP----SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
+P + P +++A P+ + +++LL+ H + H + + L+
Sbjct: 122 LPPVQAPPEVTDNRKLYATKRWTRPVHYTRYIESLLEFYHVTYVHRDHWFN--YIDYLLL 179
Query: 385 FLTPAS-GLQG 394
+ TP+ GL G
Sbjct: 180 YGTPSKLGLDG 190
>gi|213966890|ref|ZP_03395040.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato T1]
gi|301381572|ref|ZP_07229990.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato Max13]
gi|302061672|ref|ZP_07253213.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato K40]
gi|302134357|ref|ZP_07260347.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|213928212|gb|EEB61757.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato T1]
Length = 354
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAIERYGFIWVWPGEREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFKPADEQ---LTATIREGQH 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQLNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|28870083|ref|NP_792702.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|422656822|ref|ZP_16719266.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
gi|28853329|gb|AAO56397.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. tomato str. DC3000]
gi|331015362|gb|EGH95418.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. lachrymans str. M302278]
Length = 354
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAIERYGFIWVWPGEREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK + + P + + M+ +F + + R
Sbjct: 236 HAGKGGYHAPHEFKASSIVVDFITPETDTSIWYFWGMARNFKPADEQ---LTATIREGQH 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ + + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQLNLLQHPHRNLLKLNIDAGGVQSR 330
>gi|421849881|ref|ZP_16282853.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus NBRC 101655]
gi|421853347|ref|ZP_16286023.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371459301|dbj|GAB28056.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371478455|dbj|GAB31226.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 372
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 176 DQTCASPSTSKQ-SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP 234
DQT + S++++ +++ KGK+ + + S P ++W+PVA+S +LK +
Sbjct: 2 DQTAQTDSSTQELAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 235 FDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 294
P + R G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGTPIALVRPDAGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 295 P---STQLRNVKIKSLPCFEQEGMIWIWPGD--EPPTATIPCLLPPSGFEIHAEIVMELP 349
P +L N +++ PC EQ+GMI+++PGD + T +P L + +
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGDPEKADTVPLPAHLARASNPAYKTRYFGTT 170
Query: 350 I--EHGLLLDNLLDLAHAPFTHTSTFAK 375
I + + +NL+D+ H F H+ +
Sbjct: 171 IGCHYSFMHENLMDMNHQ-FMHSKQMGQ 197
>gi|262279727|ref|ZP_06057512.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
calcoaceticus RUH2202]
gi|262260078|gb|EEY78811.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
calcoaceticus RUH2202]
Length = 358
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMDCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|257056591|ref|YP_003134423.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
gi|256586463|gb|ACU97596.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
Length = 377
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 57/324 (17%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ A+ ++ D + P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDYEVTDKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKIIGD 85
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QCPYHG +++ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 86 ELQCPYHGLRFNSAGRCTAMPAQETLNPSALVPSYPVVERYRYVWVWVGD--PNLADPNT 143
Query: 333 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 375
+P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 144 VPDMHQMDDPAWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHSSSIGQEELSEA 197
Query: 376 -------GWSVPS---LVKFLTPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 416
G +V ++ P L+ D +P +D ++F P + +G
Sbjct: 198 DFDVVHEGNTVTVTRWMLNVDAPPFWLRNMRDKFPGFEGKVDRWQIIKFEAPSTIRIDVG 257
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYL 472
++K G + R + + ++ P + + + LD ++ +
Sbjct: 258 VAKAGTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYRLDSQTITTRL------ 311
Query: 473 WRHFAEQVLNEDLRLVLGQQERMN 496
R V ED ++ QQ ++
Sbjct: 312 -RQSVSGVFAEDEDMLRAQQRAID 334
>gi|332855082|ref|ZP_08435687.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870056|ref|ZP_08439017.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332727662|gb|EGJ59079.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332732472|gb|EGJ63724.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
Length = 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 36 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 94
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 95 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 152
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 153 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 200
>gi|427739261|ref|YP_007058805.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374302|gb|AFY58258.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 374
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 25/166 (15%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N+W+P ++++LK ++P + ++R +DG +++ C H+ LH G V
Sbjct: 24 NYWYPATWASELKPSQVLPVVIWNSAIALYRSQDGQVHAIEDACPHKGVALHKGKVTGEN 83
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPG---------- 321
+ CPYHGWE++ +G C +P +L K +S E+ ++WI+PG
Sbjct: 84 LACPYHGWEFNGNGICTNIPYFPKDQKLPCAKARSYAVREKYNIVWIFPGAVEDSEKVEL 143
Query: 322 ------DEPPTATIPCLLPPSGFEIHAEIVME--LPIEHGLLLDNL 359
D+P IP P F+ H I E + + HG L +NL
Sbjct: 144 PSVPEYDDPNWLAIPI---PGEFKAHFSICNENTMDVFHGYLHENL 186
>gi|414079743|ref|YP_007001167.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413973022|gb|AFW97110.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 469
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 140/312 (44%), Gaps = 32/312 (10%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRA 263
G P + +L W+PV + DL PF + VI+ K+ + C HR
Sbjct: 19 GGSNPDSFQLAEAWYPVHYLQDLDKSKPTPFTLLGKDIVIWWDQKNSSWQVFIDQCPHRL 78
Query: 264 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--------IKSLPCFEQEG 314
PL G +NE G ++CPYHGW ++ DG C+K+P Q+ K + SLP E++G
Sbjct: 79 APLSEGRINEDGLLECPYHGWSFAGDGSCQKIPQ-QVAGGKAETSPRACVPSLPTTERQG 137
Query: 315 MIWIWPGDEPPTAT---IPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 367
+++++ G+ P A +P + P P G+ I ++P + LL+N+LD +H F
Sbjct: 138 LLFVYAGN-PENAINTKVPVVEPIESAPEGWVI-MNTFRDVPYDALTLLENILDPSHIAF 195
Query: 368 THTSTFA-KGWSVPSLVKFLTPAS-GLQGYWDPYPIDMEFRP-PCMVLSTIGISKPGKLE 424
TH T + + P ++ + G +G W +P LST I+ PG L
Sbjct: 196 THHLTVGNRANAAPLELEIVESGKYGFEGIW-----KQGLKPGQSGKLSTTFIA-PG-LM 248
Query: 425 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLK--HVPFMQYLWRHFAEQVLN 482
+ + + +P + + R++ R F S + + + H + +
Sbjct: 249 WHDINAEKGRILTVVYAVPIRKGECRIIARFPFKFKSQIPGFFIKIRPRWYVHIGQNGVL 308
Query: 483 EDLRLVLGQQER 494
ED ++ L QER
Sbjct: 309 EDDQIFLHYQER 320
>gi|417544904|ref|ZP_12195990.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|421667444|ref|ZP_16107514.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|421669624|ref|ZP_16109643.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
gi|400382792|gb|EJP41470.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC032]
gi|410384719|gb|EKP37225.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC087]
gi|410388009|gb|EKP40449.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC099]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRINGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421652401|ref|ZP_16092760.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425747423|ref|ZP_18865431.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|445457815|ref|ZP_21446730.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
gi|408505527|gb|EKK07248.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC0162]
gi|425493997|gb|EKU60219.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-348]
gi|444775995|gb|ELX00047.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC047]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 330
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 331 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|193076823|gb|ABO11546.2| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 36 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 94
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 95 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 152
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 153 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 200
>gi|456357222|dbj|BAM91667.1| vanillate O-demethylase oxygenase, iron-sulfur subunit, vanA-like
protein [Agromonas oligotrophica S58]
Length = 347
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 131/335 (39%), Gaps = 49/335 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGTVAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +++ G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFNPQGRCTFMPSQETINPSACVRAYPAVERHRFIWLWMGD--PALADPATI 124
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 375
P G IH ++ L++DNL+DL H F H S+
Sbjct: 125 PDMHWNHDPAWAGDGKTIHVN------CDYRLVVDNLMDLTHETFVHGSSIGNEALTEAP 178
Query: 376 -----GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
G ++ + F G +G D + I + F PC V +G++ G
Sbjct: 179 FDVTHGERTATVTRWMHGIEPPPFWARQLGKEGLVDRWQI-IRFEAPCTVTIDVGVAPTG 237
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ R + L+ P + + + + ++ + + R +
Sbjct: 238 TGAPEGDRSQGVNGMVLNTITPETERTCHYFWAFARNYQISEQR---LTTEIREGVSGIF 294
Query: 482 NEDLRLVLGQQERM--NNGANVWNLPVGYDKLGVR 514
ED ++ QQ M N G +NL + + R
Sbjct: 295 REDELILEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|398993816|ref|ZP_10696751.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133724|gb|EJM22909.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 368
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 200 SLNVSGPVQPYNTRLK-----NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGC 254
S++V+ P P + + + W+ FS +L + + EP VIFR +G
Sbjct: 2 SVHVTQPFDPLHDKPAAAFPLDQWYVAGFSWELNNKPLA-RTLLGEPLVIFRTGNGQVAA 60
Query: 255 VQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFE 311
+++ C HR+ PL LG+V E ++C YHG YST G+C ++P Q++ K++S E
Sbjct: 61 LEDRCCHRSVPLSLGTVEEQGVRCGYHGLLYSTSGQCLEIPG-QVKIPGKAKVRSFHICE 119
Query: 312 QEGMIWIWPGDEPPTATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHA 365
Q+ ++W+W G + P PP SG + V L+ DNLLDL+H
Sbjct: 120 QDQILWVWFGHD--VLAAPLREPPAYPHHTSGEYLFGGDVYHYDAPWQLIHDNLLDLSHL 177
Query: 366 PFTHTSTFA 374
+ H T
Sbjct: 178 GYVHLHTIG 186
>gi|254414093|ref|ZP_05027861.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179229|gb|EDX74225.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 371
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 134/340 (39%), Gaps = 53/340 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKNFW+ FS+ + + +V++R G + + C HR L LG V+
Sbjct: 2 LKNFWYACEFSSAITQKPKQIL-MLNQRFVLYRNTHGQVVALNDQCPHRGAALSLGWVDN 60
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD-----E 323
++CPYHGW++ DGKC +P+ + ++ S P E+ G +W++ GD
Sbjct: 61 NCLRCPYHGWKFQADGKCIDIPANAPEMPIPKKARVDSYPVQEKYGFVWLFYGDLPPEKR 120
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK-------- 375
PP T+P + + + E + +++ +D AH H +F +
Sbjct: 121 PPLPTLPDFIFANLHPVEYECTEN--AHYARIMEINMDFAHVIAVHKQSFGQRIPLHKTI 178
Query: 376 -------GWSVPSLVKFLTPASG------LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK 422
WS + V + + + L G + F P + LS I I + G
Sbjct: 179 EYQVEEDAWSGVATVNYESLGNSKSVLNFLLGGRPQLTTRLSFFLPNVTLSEISIGRGGS 238
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKT---RLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
+ L L LP + T R+ YR L F P++ L+R +
Sbjct: 239 FD--------IKLIVLIAHLPIDEETTVVKRIFYRNFLRF-------PWLDGLFRKLDSK 283
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWR 519
+ ED +V + + L V D LG+ YR R
Sbjct: 284 LTEEDAVIVTSLSPKSMPKLSE-ELHVAADALGLAYRKLR 322
>gi|422298704|ref|ZP_16386294.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas avellanae
BPIC 631]
gi|407989564|gb|EKG31854.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas avellanae
BPIC 631]
Length = 354
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 44/244 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGK 422
GK
Sbjct: 236 HAGK 239
>gi|407695328|ref|YP_006820116.1| oxidoreductase subunit alpha [Alcanivorax dieselolei B5]
gi|407252666|gb|AFT69773.1| Oxidoreductase subunit alpha [Alcanivorax dieselolei B5]
Length = 351
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 117/277 (42%), Gaps = 34/277 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ +S ++ + M + EP V +R +DG + C HR PL G V
Sbjct: 12 RNQWYVAGWSDEVSREPMERW-LLNEPVVFYRREDGAIVALHGRCPHRQFPLAKGRVVGD 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP-------P 325
R++C YHG+ + G C ++P+ ++ + +I + P E+ WIW GD P
Sbjct: 71 RLECGYHGFTFDQSGACTRIPTQEVIPSSCRIDAYPVVERWNWFWIWMGDPDKADESLIP 130
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA------KGWSV 379
I L P + A + L H L+ +NL DL+H F H G+ V
Sbjct: 131 DHDIVKLTDPDWLPVKAATHL-LKARHQLMHENLCDLSHLTFLHPGIIGVDAVADTGFDV 189
Query: 380 PSLVKFLTPASGL-----QGYWDPY-----PID----MEFRPPCMVLSTIGISKPGKLEG 425
+ A + G++ PID MEF PC+ L+ K +G
Sbjct: 190 SGEGMWYRDARAMYNQAPTGFFSDILDYHEPIDRLMSMEFYLPCLHLAEEVFLAHDKKDG 249
Query: 426 QNTRQCATH-LHQLHVCLPSSRKKTRLLYRMSLDFAS 461
+ R+ T+ +H H P++ +T S +FA+
Sbjct: 250 EPGRELGTYKVH--HAVTPATDHETHYFVAYSRNFAT 284
>gi|126731895|ref|ZP_01747699.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
gi|126707722|gb|EBA06784.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
Length = 356
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 27/256 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A+ST++ DD + F + V++R DG +++ C HR PL G
Sbjct: 5 IRNAWYVAAWSTEIDDD-LRRFTILGDHVVMYRKSDGGVVALEDRCPHRLLPLSKGKRVG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+QC YHG + G C ++P T L ++ +++ P E+ G++WIW GD T
Sbjct: 64 DNVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVEAFPTEERHGIVWIWMGDAARADTSKI 123
Query: 332 LLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
P G+++H + L + + +NL+D AH F H +T S V T
Sbjct: 124 FDMPEFTDPGWKVHHGDALHLRSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQT 183
Query: 388 PASGLQGY-W--DPYPIDME-----------------FRPPCMVLSTIGISKPGKLEGQN 427
+ + W D PI PC + G + + ++
Sbjct: 184 EGEAIVAWRWIRDAEPIGFFKGFGGFTGNVDRWHYYYLYTPCTAVIDFGSAPAEEAIAED 243
Query: 428 TRQCATHLHQLHVCLP 443
R + LH P
Sbjct: 244 ERDKGVRIFALHFITP 259
>gi|403673643|ref|ZP_10935934.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. NCTC
10304]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|346993484|ref|ZP_08861556.1| Rieske (2Fe-2S) protein [Ruegeria sp. TW15]
Length = 349
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 214 LKNFWFPVAFSTD----LKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
L+N W+ A+S D LK +T + E V++R +DG P +++ C HR PL G
Sbjct: 3 LRNCWYVAAWSKDIGRELKAETYLG-----ENVVLYRQQDGTPVALEDACPHRKLPLSKG 57
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
++ ++C YHG + GKC P+ + R +KS P ++ ++WIW GD P
Sbjct: 58 NLIGDTVECGYHGLTFDCSGKCTDSPTQRGMTPRRAVVKSYPVVDRYRLLWIWMGD-PEL 116
Query: 327 ATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
A + P F+ + VM++ + + DNLLD +H + H S+FA
Sbjct: 117 ANPDLIFPIENFDNPTWGMTDGGVMDIDCHYLWVCDNLLDPSHVAWVHVSSFA 169
>gi|220926846|ref|YP_002502148.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219951453|gb|ACL61845.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 361
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 115/273 (42%), Gaps = 33/273 (12%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + C + V++R DG +++ C HR PL LG ++
Sbjct: 10 NAWYAVAWDHEIKRELTARTIC-DTGIVLYRRTDGQVAALEDACWHRLLPLSLGHLHGDE 68
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG ++ G+C MP+ + N +++ P E+ +IW+W GD P P +
Sbjct: 69 VVCGYHGLIFNPAGRCTFMPAQETINPSACVRAFPVVERYRLIWVWMGD--PALADPDTV 126
Query: 334 PPSGFEIHAEIVME------LPIEHGLLLDNLLDLAHAPFTHTSTFA------------- 374
P + A V E L ++ L++DNL+DL H + H +
Sbjct: 127 PDFHWNSDAPWVGEGGTFYSLQCDYRLVIDNLMDLTHETYVHAGSIGDEAITRNPFEVTH 186
Query: 375 --KGWSVPSLVKFLTPAS------GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
+ +V ++ + P G G+ D + I + F PC+V +G++ G Q
Sbjct: 187 TDRKVTVERWMENIEPPPFWARLLGRPGHVDRWQI-IHFEAPCVVAGDVGVALTGTGARQ 245
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 459
R + L P + + +F
Sbjct: 246 GDRSQGVNGFFLAAITPETGTSCHYFWNFVRNF 278
>gi|385674800|ref|ZP_10048728.1| oxidoreductase subunit alpha [Amycolatopsis sp. ATCC 39116]
Length = 348
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 117/278 (42%), Gaps = 35/278 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+++ W+ A+ +++ + ++ EP V +R + G + + C HR PL ++
Sbjct: 5 VRDQWYVAAYGSEVGRE-LLARTILGEPIVFYRTEAGEVVALADRCVHRRYPLSESRLDG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
RI C YHG+ Y G C +P S R ++ S P EQ+ +W+W GD P
Sbjct: 64 DRIVCGYHGFTYEPSGSCVFVPGQSRIPRTARVPSYPVVEQDSFVWVWIGD--PARADAT 121
Query: 332 LLPPSGFEIHAEIV----ME-LPIEHGLLLDNLLDLAHAPFTHTSTF------------- 373
L+P + + ME L + LL+DNL+DL+H + H
Sbjct: 122 LIPRAPWLADPAYTTVCGMEPLAARYDLLVDNLMDLSHETYLHGGYIGTPEVANTPITTE 181
Query: 374 ----------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL 423
++ + F ++G+QG + D+E+ PPC+ L I+ G L
Sbjct: 182 VDEDRRIIYVSRHMDDAACPPFYAKSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPVGVL 240
Query: 424 -EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
T H+ ++ P + T + ++ DFA
Sbjct: 241 PNADGTDPEGFHVEVVYAITPETEHSTHDFWAVARDFA 278
>gi|414164011|ref|ZP_11420258.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
gi|410881791|gb|EKS29631.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
Length = 382
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 272
++N W+ + + D + + ++P V +R K G + CAH+ PL G +
Sbjct: 15 VENCWYMIGTAADFPAEKLTGHVVAKKPIVAWRTKHGQVVAYDDRCAHKRFPLSKGRLMQ 74
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTAT 328
+G ++C YHG Y GKC +PS + ++ P EQ+G+IW+WPG+ + T
Sbjct: 75 DGTLECAYHGLRYDMTGKCVMIPSHPTGPISPQAIVRPYPIVEQDGLIWLWPGNPALSGT 134
Query: 329 -IPCLLPPSGFEI-HAEIV--MELPIEHGLLLDNLLDLAH 364
P LP G E EI+ ME+P + LL++NLLD+ H
Sbjct: 135 RKPPRLPEVGSEDWKTEIIGPMEIPANYLLLIENLLDITH 174
>gi|421806406|ref|ZP_16242270.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC035]
gi|410417750|gb|EKP69518.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC035]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|424060551|ref|ZP_17798042.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
gi|404668503|gb|EKB36412.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Ab33333]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|169796641|ref|YP_001714434.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213156161|ref|YP_002318581.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|301347277|ref|ZP_07228018.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB056]
gi|301510924|ref|ZP_07236161.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB058]
gi|301595598|ref|ZP_07240606.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB059]
gi|417573227|ref|ZP_12224081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|421644603|ref|ZP_16085081.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|421646206|ref|ZP_16086658.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|421657203|ref|ZP_16097476.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|421700370|ref|ZP_16139887.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|421800681|ref|ZP_16236650.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
gi|169149568|emb|CAM87457.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
baumannii AYE]
gi|213055321|gb|ACJ40223.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB0057]
gi|400208795|gb|EJO39765.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC-5]
gi|404570752|gb|EKA75825.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-58]
gi|408504744|gb|EKK06479.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-235]
gi|408517593|gb|EKK19131.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-251]
gi|408713779|gb|EKL58935.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-83]
gi|410406552|gb|EKP58555.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Canada BC1]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|70730833|ref|YP_260574.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas protegens
Pf-5]
gi|68345132|gb|AAY92738.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas protegens
Pf-5]
Length = 352
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 130/338 (38%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L+ + C E V +R +G V++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDELQGKPLGRQICGEH-MVFYRAHEGRVTAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTFAAVERYGFIWVWPGDQ--ALADPALI 120
Query: 334 -----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWADNDQWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ + G +W D P+D F PP VL +G++
Sbjct: 176 QTTVDGDQVVTARHMHNVMPPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
G Q + P S + M+ +F P + R
Sbjct: 236 HAGHGGYDAPAQYKASSIVVDFITPESDTSIWYFWGMARNFNP---QDPALTESIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLEMLERQQQNLLAQPQRNLLKLNIDAGGVQSR 330
>gi|428208093|ref|YP_007092446.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
gi|428010014|gb|AFY88577.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
Length = 474
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 139/343 (40%), Gaps = 33/343 (9%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAH 261
++G P + W+PV + DL PF + I+ + V ++ C H
Sbjct: 18 LAGGTDPAFFDCQEVWYPVHYVQDLDKSKPTPFTLLGQDIAIWWEQQAECWRVFEDKCPH 77
Query: 262 RACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCF-EQ 312
R PL G + E G ++CPYHGW ++ G C+++P ++SLP +
Sbjct: 78 RLAPLSQGRIAEDGLLECPYHGWAFAGAGDCQRIPQQVAGQAAVTSPRACVRSLPTIVVK 137
Query: 313 EGMIWIWPGD-EPPTATIPCLLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPF 367
+G+++++PG E T T ++ P + + + +LP + L++N+LD +H PF
Sbjct: 138 QGLLFVYPGKAENATKTKVPVIEPLEESLEGWVCIDTFRDLPYDALTLMENVLDASHVPF 197
Query: 368 THTSTFAKGWSVPSLVKFLTPAS--GLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL-E 424
TH + + S+ + + G G W P R + PG +
Sbjct: 198 THHRSVGNRANASSVELEVVESGKHGFTGVWQEGP-----RRGTLGRQDTTFVAPGLMWH 252
Query: 425 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLN 482
++Q L ++ P + + RL R FAS L + + H + +
Sbjct: 253 DLTSKQFGRTLTAVYAT-PIRKGECRLFARFPFKFASKLPGWIIKLTPRWYSHLGQNSVL 311
Query: 483 EDLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
ED ++ L QER N + LP D V R W
Sbjct: 312 EDDQIFLHYQERYLEAGGGSGNFTKAFYLPTQADAFVVELRQW 354
>gi|417551548|ref|ZP_12202626.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|417552026|ref|ZP_12203096.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|417562953|ref|ZP_12213832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|417564000|ref|ZP_12214874.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|421199265|ref|ZP_15656429.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|421454954|ref|ZP_15904301.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|421633387|ref|ZP_16074022.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|421654322|ref|ZP_16094652.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|421661633|ref|ZP_16101806.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|421804713|ref|ZP_16240616.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|445434199|ref|ZP_21439892.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
gi|395525535|gb|EJG13624.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC137]
gi|395555756|gb|EJG21757.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC143]
gi|395565232|gb|EJG26880.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC109]
gi|400212744|gb|EJO43703.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
IS-123]
gi|400386003|gb|EJP49078.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-18]
gi|400392285|gb|EJP59331.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-81]
gi|408511089|gb|EKK12743.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-72]
gi|408706618|gb|EKL51925.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-13]
gi|408715639|gb|EKL60764.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC110]
gi|410410730|gb|EKP62622.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-A-694]
gi|444756604|gb|ELW81144.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC021]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|215484103|ref|YP_002326328.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|421622339|ref|ZP_16063242.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|421795000|ref|ZP_16231088.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
gi|213987796|gb|ACJ58095.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|408695955|gb|EKL41509.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC074]
gi|410402452|gb|EKP54569.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-21]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|421787610|ref|ZP_16223955.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
gi|410406503|gb|EKP58507.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-82]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVIEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|299530152|ref|ZP_07043578.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298721809|gb|EFI62740.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 354
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 41/312 (13%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A S++L D V E V+FR DG +++ C HRA PL G+V
Sbjct: 23 NQWYVAAHSSELADKP-VGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCG 81
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++C YHG Y+ +GKC ++P + K+ + E++G+IWIW G +P C
Sbjct: 82 LRCGYHGLLYNHEGKCVEIPGQEKIPTKAKVSAYHVQERDGLIWIWFG-KPENPEPMCDA 140
Query: 334 PPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVP-------- 380
P E V + H L+ DNLLDL+H + H T +
Sbjct: 141 PSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHTIGGNAKLHMNAEMKVE 200
Query: 381 ------SLVKFLTPASGLQGYWDPYPI--------DMEFRPPCMVLSTIGISKPGKLEGQ 426
+V+++ + Y YP ++EFR +++ T G G
Sbjct: 201 SEGDFVRVVRYMPDSVPPPTYSAAYPFKGNVDRWQEIEFRVSHLLIWT-GAVDQGTDAMD 259
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ---VLNE 483
+ ++ H+ H P S + M+ + A ++ V R EQ +E
Sbjct: 260 DPQRGGFHMRGFHGVTPESETTCHYFWTMATNPAKDVEEVK------RKVLEQTELTFDE 313
Query: 484 DLRLVLGQQERM 495
D ++ Q + M
Sbjct: 314 DKVVIEAQYQNM 325
>gi|226951632|ref|ZP_03822096.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
gi|226837613|gb|EEH69996.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ATCC 27244]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ + K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRTHGFPCNKAYAVIEKYGFIWVWPGEK--ALADESK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWAEHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|126641164|ref|YP_001084148.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 17978]
Length = 358
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 330
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALADEAKLP 121
Query: 331 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|424741369|ref|ZP_18169728.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-141]
gi|422944994|gb|EKU39967.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-141]
Length = 358
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWIWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIHCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|120402016|ref|YP_951845.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium
vanbaalenii PYR-1]
gi|119954834|gb|ABM11839.1| Rieske (2Fe-2S) domain protein [Mycobacterium vanbaalenii PYR-1]
Length = 380
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
+GP +P L+ W PV S +L+ VP E ++RG+DG+ V CAHR
Sbjct: 12 TGPGRPAGHLLRQRWQPVYASEELEAGRAVPLKILHEELTLYRGEDGVAHIVAGRCAHRG 71
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVKIKSLPCFEQEGMIWIWP 320
L +G+V ++C YHGW Y G+C P+ + V+I S P E G IW +
Sbjct: 72 VLLAVGTVEGDCVRCRYHGWRYDGAGQCVDQPAERRSFADKVRIASYPVEEYFGFIWTYL 131
Query: 321 GDEP 324
G+ P
Sbjct: 132 GESP 135
>gi|407773414|ref|ZP_11120715.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
gi|407283878|gb|EKF09406.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
Length = 338
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 140/330 (42%), Gaps = 33/330 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+NFW+ + ++ + C E V++R D ++++C HR PL G V
Sbjct: 3 LRNFWYVAGWDGEIGRTPVARTICNENV-VLYRRADRSLVALEDSCPHRLLPLSQGYVEG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPT--ATI 329
R+ C YHG E+ DG C MP+ Q + + +++ P E++ +W+W GD+ A +
Sbjct: 62 DRLVCGYHGLEFDGDGACVHMPNQQSIHPEACVRAYPVVEKDRFVWVWIGDKEKADEALV 121
Query: 330 PCLLPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------ 375
P +P + E + ++ + LL+DNL+DL+H + H S+ +
Sbjct: 122 P-DIPHASEEGWVFDGGTYDVKCGYELLVDNLMDLSHETYVHPSSIGQLEITESLPQTRS 180
Query: 376 ---GWSVPSLVKFLTP----ASGLQG--YWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ 426
+V ++ + P A+ L+ D + I F P V+ +G++ G Q
Sbjct: 181 DDESVTVERWMENIVPPPFWANNLKSKEVCDRWQI-CTFTLPSNVMIDVGVALAGTGAQQ 239
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 486
R ++ P + R + M +F + Q + + +V EDL
Sbjct: 240 GDRSKGVTGIVVNCMTPETETTCRYYWGMVRNFD--IDDNGLTQNI-KDAQAKVFYEDLE 296
Query: 487 LVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+V GQQ M L D GVR R
Sbjct: 297 VVEGQQANMLRHPERKLLNFNIDAGGVRAR 326
>gi|421696591|ref|ZP_16136173.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
gi|404561352|gb|EKA66587.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-692]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|428226501|ref|YP_007110598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Geitlerinema
sp. PCC 7407]
gi|427986402|gb|AFY67546.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geitlerinema sp. PCC
7407]
Length = 365
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 34/189 (17%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ V++S LK ++ +++ ++R +G +++ C H+ LH G V
Sbjct: 24 NHWYAVSWSDRLKPGQVIAVTVWQQAIAVYRDTEGNVHALEDACPHKGVALHKGLVLGQN 83
Query: 276 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+ C YHGWE+ + G+C K+ PS +L K +S P ++ ++WI+PGD T P
Sbjct: 84 LACRYHGWEFDSQGECAKIPYLPPSQKLPCAKARSYPICDRYNLLWIFPGDPALAETTPV 143
Query: 332 ------------LLPPSG-FEIHAEIVME--LPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
++P +G F+ H I E + + HG L +NL +G
Sbjct: 144 PHIAEFDQPGYLMVPVTGHFKAHFSICNENSMDVFHGFLHENL---------------QG 188
Query: 377 WSVPSLVKF 385
W P LVK
Sbjct: 189 WFDPQLVKL 197
>gi|375134014|ref|YP_004994664.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
gi|325121459|gb|ADY80982.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 330
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALAEEAKLP 121
Query: 331 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|428209012|ref|YP_007093365.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010933|gb|AFY89496.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 351
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA S ++ + + + + I+RG DG +++ C HR L G V +
Sbjct: 21 NHWYAVARSREVTTNP-IAVTLWHQAIAIYRGNDGKVYALEDRCPHRQVKLSHGRVVDNN 79
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEP-PTATIP 330
++C YHGW + +G+C +P + +L N KI+ P EQ+G +W++PGD T P
Sbjct: 80 LECAYHGWRIAGNGECVDVPYLATNQKLPNCKIRHYPIREQDGFVWLFPGDRNLATQLQP 139
Query: 331 CLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
LP I ++E + L++NL+D+ H H + W+ P L
Sbjct: 140 LGLPEWDHLNYIATVSIIECAAHYSYLIENLMDMYHG---HLHQSWQAWADPIL 190
>gi|109897194|ref|YP_660449.1| Rieske (2Fe-2S) domain-containing protein [Pseudoalteromonas
atlantica T6c]
gi|109699475|gb|ABG39395.1| Rieske (2Fe-2S) region [Pseudoalteromonas atlantica T6c]
Length = 357
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 13/180 (7%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACP 265
P + ++ ++N W+ AFST++ + M +P V++R +DG P + C HR P
Sbjct: 3 PFKYKSSIVRNRWYMAAFSTEITREPM-ERTMLNKPVVMYRKEDGTPVAMYGLCPHRYLP 61
Query: 266 LHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI--KSLPCFEQEGMIWIWPGDE 323
L G V I C YHG++++ G+C ++PS +I E+ + WIW GDE
Sbjct: 62 LVQGRVEGDAIVCGYHGFKFADTGECIQIPSQPKVTGRICQPVYKIIEKGPICWIWMGDE 121
Query: 324 PPTATIPCLLPP--------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L+PP G++ H+ L LL+DNL+DL H P+ H K
Sbjct: 122 DKCDI--DLIPPYEDFGLDQPGWDFHSANYFHLEGRSQLLVDNLMDLTHLPYVHHHIAGK 179
>gi|49176900|ref|YP_025403.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72384285|ref|YP_293638.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|39777480|gb|AAR31055.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72123638|gb|AAZ65781.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KNFW+ A ++ ++ E+P V FR DG + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRQ-LLARTLLEQPVVFFRRNDGSVAALADRCSHRRVSLSLGRLIGD 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+QC YHG ++ DG C +P Q R + ++S P E++G +WIWPGD P
Sbjct: 63 EVQCGYHGLTFAGDGSCTSIPG-QSRVPPSACVRSYPVVERDGFVWIWPGD--PALANET 119
Query: 332 LLPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 372
L+P + + P E L+ ++N+LDL+H + H T
Sbjct: 120 LVPDYAEICSSGRYVGRPAEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|421624090|ref|ZP_16064966.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
gi|408702121|gb|EKL47535.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC098]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|443316513|ref|ZP_21045954.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783877|gb|ELR93776.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 337
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ FW+PV L + F+ E V++ + G P V++ C HR L LG V++
Sbjct: 9 FRRFWYPVMPRQRLAEGPQT-FELLGESLVLWLDQQGQPAAVRDRCCHRTAKLSLGRVDQ 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
GRI CPYHGWE+ G C ++P + + ++ + C E+ G +W+ D P
Sbjct: 68 GRICCPYHGWEFDPSGACVRVPQLKADAAIPAHYRVAAYRCTERYGYVWVCLED--PLLD 125
Query: 329 IPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+P + + + E +++N LDLAH F HT TF
Sbjct: 126 VPQIDEAEDPNYRLIQEFYEPWQCAGLRVMENELDLAHPTFVHTETFGS 174
>gi|333902226|ref|YP_004476099.1| vanillate monooxygenase [Pseudomonas fulva 12-X]
gi|333117491|gb|AEF24005.1| Vanillate monooxygenase [Pseudomonas fulva 12-X]
Length = 354
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 125/313 (39%), Gaps = 39/313 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + + C E+ V +RG +G +++ C HR PL LG V G
Sbjct: 4 KNAWYVACTPDEIAEKPLGRQICGEKI-VFYRGAEGQVVALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEPPT--ATIPC 331
+ C YHG E +GK MP ++R I++ E+ G IW+W GD+ ATI
Sbjct: 63 NLICGYHGLEMGCEGKTVSMPGQRVRGFPGIRAFAAVERYGFIWVWTGDQALADPATIHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK---- 384
L + + + + ++ L++DNL+DL H + H S+ + P + K
Sbjct: 123 LEWAENPDWAYGGGLFHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPPVTKVEGD 182
Query: 385 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGKLEG 425
F A G D P+D F PP V+ +G++ G
Sbjct: 183 EVITSRHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFNPPSHVMIEVGVAHAGHGGY 242
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL---WRHFAEQVLN 482
+ + + P S + M+ F P Q L R ++ +
Sbjct: 243 EAPAEVKASSIVVDFITPESETSIWYFWGMARSFK------PEDQALTDSIRQGQGKIFS 296
Query: 483 EDLRLVLGQQERM 495
EDL ++ QQ +
Sbjct: 297 EDLEMLERQQRNL 309
>gi|293608775|ref|ZP_06691078.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423331|ref|ZP_18913489.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-136]
gi|292829348|gb|EFF87710.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699884|gb|EKU69483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-136]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDE--PPTATIP 330
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++ A +P
Sbjct: 62 GNLVCGYHGLVTGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEKALAEEAKLP 121
Query: 331 CLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L E + + + ++ L++DNL+DL H + H+S+ +
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMVDNLMDLTHETYVHSSSIGQ 167
>gi|384421414|ref|YP_005630774.1| vanillate O-demethylase oxygenase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
gi|353464327|gb|AEQ98606.1| vanillate O-demethylase oxygenase subunit [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 358
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 127/317 (40%), Gaps = 47/317 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEIKH-VLSPRKICNLDVVVYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+T G+C MPS + N ++ P E+ +WIWPGD + T IP
Sbjct: 70 VVCGYHGLVYNTQGRCVHMPSQETINPSACVRRFPVAEKHRYVWIWPGDPAQADTRLIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA---------- 374
L G I+A+ ++ L+LDNL+DL H F H S+
Sbjct: 130 LHWAHDPAWAGDGRTIYAK------CDYRLVLDNLMDLTHETFVHGSSIGQDEVAEAPFD 183
Query: 375 -----KGWSVPSLVKFLTPAS----------GLQGYWDPYPIDMEFRPPCMVLSTIGISK 419
+G +V + + P +G D + I + F P + +G++
Sbjct: 184 VVHGDRGVTVSRWMHNIDPPPFWAGQIARHLDYRGKVDRWQI-IHFEAPGTIAIDVGVAI 242
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
G + R + + L+ P + + ++A H + L R
Sbjct: 243 TGTGAPEGDRSQGVNGYVLNTVTPETDTTCHYFWAFMRNYA---LHDQSLTTLTREGVTG 299
Query: 480 VLNEDLRLVLGQQERMN 496
V ED ++ QQ ++
Sbjct: 300 VFGEDEAVLEAQQRAID 316
>gi|159036240|ref|YP_001535493.1| phthalate 4,5-dioxygenase [Salinispora arenicola CNS-205]
gi|157915075|gb|ABV96502.1| Phthalate 4,5-dioxygenase [Salinispora arenicola CNS-205]
Length = 406
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 87/202 (43%), Gaps = 19/202 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNT 258
L GP P L+ +W PV S L + P + E +V+FR DG GC
Sbjct: 10 LTRVGPGTPMGRLLREYWMPVMRSGRLTEPGGAPMAVELLGEKFVVFRADDGTLGCFAEA 69
Query: 259 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLR------NVKIKSLPCFEQ 312
C HR L L + ++C YHGW++S G+ + PS VK++ P E
Sbjct: 70 CPHRGASLTLARNEDCALRCIYHGWKFSVTGQVLETPSEPAELTRFASRVKLRHHPVIES 129
Query: 313 EGMIWIWPGD------EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 366
G+IW+W G PP T L P F + A V+E GL D +D AH
Sbjct: 130 GGVIWVWIGGTGRSAPAPPAFTFTKLPPEQVFGLVA--VVECNWLQGLEAD--IDSAHVS 185
Query: 367 FTHTSTFAKGWSVPSLVKFLTP 388
H T A+ ++ L+ TP
Sbjct: 186 LLH-ETEARAGALRDLLDDRTP 206
>gi|284991273|ref|YP_003409827.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Geodermatophilus obscurus DSM 43160]
gi|284064518|gb|ADB75456.1| Rieske (2Fe-2S) iron-sulphur domain protein [Geodermatophilus
obscurus DSM 43160]
Length = 424
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NEG 274
N W+ A+ ++ + ++P P V++R G P + + C HR PL +G + +
Sbjct: 25 NAWYAAAWDHEVGRN-LLPTTIANRPVVLYRTTGGRPVALADACWHRLAPLSMGKLRGDD 83
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
I C YHG Y DG+ MP+ + N + S P E+ +WIWPGD P P L
Sbjct: 84 EIMCGYHGICYDPDGRATFMPAQETINPSATVHSFPVVERHRYVWIWPGD--PALADPAL 141
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+P + H + + + + L++DNL+DL H F H S+
Sbjct: 142 VPDLYWNEHPDWAGDGKTIRVNCSYQLIVDNLMDLTHEQFVHGSSIG 188
>gi|422590590|ref|ZP_16665244.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
gi|330877736|gb|EGH11885.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. morsprunorum str. M302280]
Length = 354
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 44/244 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R +D V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVVDKPLGRQICNEKMVFYRDQDQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGEREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP VL +G++
Sbjct: 176 VTTVEGEEVITARHMENIMPPPFWKMALRGNNLADDVPVDRWQICRFTPPSHVLIEVGVA 235
Query: 419 KPGK 422
GK
Sbjct: 236 HAGK 239
>gi|289661877|ref|ZP_06483458.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vasculorum NCPPB 702]
gi|289669971|ref|ZP_06491046.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 350
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGSGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDAEIQIPPMPGWDEEGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPEVAPDFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|37519596|ref|NP_922973.1| hypothetical protein gll0027 [Gloeobacter violaceus PCC 7421]
gi|35210587|dbj|BAC87968.1| gll0027 [Gloeobacter violaceus PCC 7421]
Length = 360
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
L NFW+ +A S + T +P P V++R G +++ CAHR L G V
Sbjct: 23 LNNFWYGLAHSPAI---TSIPRQVVVMGRPLVLYRTVGGRVVALEDRCAHRDTALSGGWV 79
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGD---- 322
++CPYHGW Y+ DG C ++P+ Q R K+++ P E+ G++W++ G+
Sbjct: 80 EGNCLRCPYHGWRYAPDGGCTEIPANQPGVAISRLAKVETFPVQERHGLVWVFLGELPEA 139
Query: 323 -EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P ++P P + E + ++ N +D++HAPF H + F +
Sbjct: 140 QRPELPSLPEYAAPGWRAVRGEFTWSG--HYTRVIANTVDMSHAPFVHAAAFGR 191
>gi|405355684|ref|ZP_11024859.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397091391|gb|EJJ22209.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 366
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N WF + S++L D + P V+FRG+ G P + + C HR PL LG V E
Sbjct: 25 LPNAWFILCASSELGDKPLA-RTLQGSPLVLFRGEGGKPATLVDRCPHRNVPLSLGRVKE 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 327
G++QC YHGW + G+C +P R + EQ+G +W++ PG EP T
Sbjct: 84 GQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTE 143
Query: 328 TIPCLLPPSGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P P ++ + ++ P L+N LD+ H + H F
Sbjct: 144 --PYRFPLLEAREYSTVRRMLRAPGSLHATLENTLDVPHTAYLHGGLF 189
>gi|383648311|ref|ZP_09958717.1| oxidoreductase subunit alpha [Streptomyces chartreusis NRRL 12338]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 125/284 (44%), Gaps = 44/284 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKD-GIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + ++ E V++R ++ G P + + C HR PL +
Sbjct: 6 RNQWYVAAYSHEVGRE-LLGRTILGETLVLYRTEEEGTPVVLHDRCVHRRYPLSEAPTRL 64
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ RI C YHG+ Y T G C +P + R ++ S P EQ+ +IW+W GD P
Sbjct: 65 DGDRIVCGYHGFTYDTTGTCVYVPGQKRVPRTARVASYPVVEQDSLIWVWIGD--PALAD 122
Query: 330 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 369
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 123 PQSIPRARHLDSPGWVTVRG---MEPIDCDYGLLVDNLLDLSHETYLHGGYIGTPEVAET 179
Query: 370 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 180 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIA 238
Query: 419 KPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
G L E + H + PS K + +S D+A+
Sbjct: 239 PVGVLPEPDGSDPNGFHTEITYAITPSGDGKVYDFWAVSRDWAT 282
>gi|427704114|ref|YP_007047336.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347282|gb|AFY29995.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 335
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 13/172 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+NFW+ V + L+D V +++FR G + + CAHR L G V
Sbjct: 5 LENFWYAVEHAHGLRDQP-VSVTLLGRRYLLFRDTAGQAHALADYCAHRGASLARGWVEG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWIWPGD-----E 323
++CPYHGW Y DG C ++P+ ++ + P EQ G +WI+PG+ E
Sbjct: 64 SCVRCPYHGWSYDVDGHCVRIPADPPGTAIPALARMATFPVREQSGFVWIFPGEAGRASE 123
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P P L P + ++++ LD +HAPF H F
Sbjct: 124 VPIPPFPELNQPGWRAVSGSYTWNAHFSR--VVESALDTSHAPFVHRPFFGN 173
>gi|16330378|ref|NP_441106.1| hypothetical protein slr1747 [Synechocystis sp. PCC 6803]
gi|383322119|ref|YP_005382972.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325288|ref|YP_005386141.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491172|ref|YP_005408848.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436439|ref|YP_005651163.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|451814536|ref|YP_007450988.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
gi|1652868|dbj|BAA17786.1| slr1747 [Synechocystis sp. PCC 6803]
gi|339273471|dbj|BAK49958.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|359271438|dbj|BAL28957.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274608|dbj|BAL32126.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277778|dbj|BAL35295.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958298|dbj|BAM51538.1| hypothetical protein BEST7613_2607 [Synechocystis sp. PCC 6803]
gi|451780505|gb|AGF51474.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
Length = 469
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 23/302 (7%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE 273
+ W+P+A+ DL F E VI+ + V + C HR PL G +N+
Sbjct: 31 RAVWYPLAYEEDLDKRKPTRFTLLGEDLVIWWEANSQQWRVYADQCPHRLAPLSEGRINK 90
Query: 274 -GRIQCPYHGWEYSTDGKCEKMPSTQL-------RNVKIKSLPCFEQEGMIWIWPG--DE 323
G+++CPYHGW ++ G+C+ +P + ++SLP +G+++ +PG D+
Sbjct: 91 AGQLECPYHGWTFAGSGQCQAIPQQHTGGQAHTSKRACVRSLPTQVAQGLLFAFPGETDQ 150
Query: 324 PPTATIPCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
+P + G + + +LP + L++N+LD +H P+TH T K +V
Sbjct: 151 AEKVALPLVDVLDGDQSEWVCLNTFRDLPYDAFTLMENVLDSSHIPYTHHKTVGKRSNVS 210
Query: 381 --SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQL 438
L G G W+ P R + T PG + T + +
Sbjct: 211 PVDLEIIHGDRQGFTGIWEEGP-----RKGTLGKQTTTFIAPGLMWHDLTSKQFGRTLTV 265
Query: 439 HVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 496
P + RL R F S + F + H + + ED ++ L QER
Sbjct: 266 VYATPIRPGECRLFARFPFKFPSKFPRLVIGFTPRWYSHLGQNRVLEDDQIFLHFQERFV 325
Query: 497 NG 498
G
Sbjct: 326 QG 327
>gi|365899304|ref|ZP_09437217.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
gi|365419928|emb|CCE09759.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
Length = 347
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 129/327 (39%), Gaps = 49/327 (14%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGTVTALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +++ G+C MPS + N +++ P E+ IW+W GD P P +
Sbjct: 67 VVCGYHGLKFNAQGRCTFMPSQETINPSACVRAYPAIERHRFIWLWMGD--PALADPADI 124
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 375
P G IH + ++ L++DNL+DL H F H S+
Sbjct: 125 PDMHWNHDPAWAGDGKTIHVK------CDYRLVVDNLMDLTHETFVHGSSIGNEAVAEAP 178
Query: 376 -----GWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
G ++ + F G +G D + I + F PC V +G++ G
Sbjct: 179 FDVTHGERTATVTRWMRGIEPPPFWAKQLGKEGLVDRWQI-IRFEAPCTVTIDVGVAPAG 237
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
+ R + L+ P + + + ++ L + R +
Sbjct: 238 TGAPEGDRSQGVNGMVLNTITPETERTCHYFWAFVRNYQ--LSEQRLTTEI-REGVSGIF 294
Query: 482 NEDLRLVLGQQERM--NNGANVWNLPV 506
ED ++ QQ M N G +NL +
Sbjct: 295 REDELILEAQQRAMDENPGRVFYNLNI 321
>gi|302543069|ref|ZP_07295411.1| oxidoreductase alpha subunit [Streptomyces hygroscopicus ATCC
53653]
gi|302460687|gb|EFL23780.1| oxidoreductase alpha subunit [Streptomyces himastatinicus ATCC
53653]
Length = 367
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 41/283 (14%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK------DGIPGCVQNTCAHRACPLHL 268
+N W+ A+ ++ + ++ EP +R + G + + C HR PL
Sbjct: 6 RNQWYVAAYGREVGRE-LLARTILNEPIAFYRTEPNSDEPTGTVVALADRCVHRRYPLSA 64
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
++ + C YHG+ Y T G C +P + R ++ S P EQ+ ++W+W GD P
Sbjct: 65 SRLDGDNVVCGYHGFTYDTSGTCVFVPGQKRVPRTARVASYPVVEQDSLVWVWIGD--PA 122
Query: 327 ATIPCLLPPSGFEIH---AEIVMELPIE--HGLLLDNLLDLAHAPFTH------------ 369
P +P + + + PI+ +GLL+DNL+DL+H + H
Sbjct: 123 LADPAAIPRAPWLADPGWTTVGGMEPIDAGYGLLVDNLMDLSHETYLHGGYIGTPEVAET 182
Query: 370 --TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGIS 418
T+ +G + + + F ++G++G + D+E+ PC+ L I+
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQ-DIEYHAPCLYLLHSRIA 241
Query: 419 KPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
G L E + A H+ + PS+ + + +S DFA
Sbjct: 242 PAGVLPEADGSDPNAFHVEITYAITPSTDQTVYDFWAVSRDFA 284
>gi|254415185|ref|ZP_05028947.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196177991|gb|EDX72993.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N+W+ VA++ +K ++P +++ ++R G ++N C H+ LH G V +
Sbjct: 24 NYWYSVAWANQIKPGQILPVKIWQQSIAVYRTPTGQLHALENACPHKGVELHKGIVQDEY 83
Query: 276 IQCPYHGWEYSTDGKCEKM----PSTQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+ CPYHGW++ GKC + P +L ++++ P E+ +IWI+PGD P C
Sbjct: 84 LACPYHGWQFDGAGKCVGIPYFPPEQKLPCAQVRTYPIQEKYKLIWIFPGD--PALATTC 141
Query: 332 LLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
LP P F + M+ + +N +D+ H F H + +GW P L +
Sbjct: 142 QLPDMPEFDHPDWFMVPVSARMK--SHFSICNENTMDVFHG-FLHQNL--QGWFDPVLKR 196
Query: 385 F 385
Sbjct: 197 L 197
>gi|108757788|ref|YP_629242.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461668|gb|ABF86853.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 363
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N WF + S++L D + P V+FRG+ G P + + C HR PL LG V E
Sbjct: 22 LPNAWFILCASSELGDKPLA-RTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKE 80
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTA 327
G++QC YHGW + G+C +P R + EQ+G +W++ PG EP T
Sbjct: 81 GQLQCGYHGWRFDGAGQCRAIPGFLGEPGARARCATAHATREQDGFVWVYSTPGVEPTTE 140
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
L + + P L+N LD+ H + H F
Sbjct: 141 PYRFPLLEAREYTTVRRTLRAPGSLHSTLENTLDVPHTAYLHGGLF 186
>gi|402822359|ref|ZP_10871849.1| vanillate O-demethylase oxygenase subunit [Sphingomonas sp. LH128]
gi|402264108|gb|EJU13981.1| vanillate O-demethylase oxygenase subunit [Sphingomonas sp. LH128]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 128/304 (42%), Gaps = 43/304 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L W+PVA + ++ + V ++P VI++ D + N C HR PL LG+
Sbjct: 28 LARHWYPVALAREVGEKP-VGTRLLDQPLVIYKSGDEV-VVATNVCPHRGVPLSLGTQQG 85
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIW---PGDEPPT 326
+ CPYHG + GKC +P+ R++ +++ P FE+ G+IW GD P
Sbjct: 86 DSVVCPYHGLRFGGGGKCVHVPAHPARDIPERLHLRTFPSFERYGLIWTCLDAEGDAPAA 145
Query: 327 ATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
IP + S F+ +++ G L+ LD+AH F HT TFA VP+
Sbjct: 146 GDIPDMPHWDESEFQQITCPWIDINGFAGRQLEGFLDVAHFAFVHTETFADPDNAEVPAY 205
Query: 383 VKFLTPASGLQGYWDP---YPIDM------------EFRPPCMVLSTIGISKPGKLEGQN 427
T YW YPI + FR +T+ I PG
Sbjct: 206 APKRTEYGFEAEYWSSVGNYPIGVSQRGVPGFNWLRHFRCHLPFTATLEIHFPG------ 259
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
L ++ P S + TRL ++ +F + L +Q ++ F +++ ED +
Sbjct: 260 ----TDRLVIMNAASPVSARVTRLFAPIARNFDTDLP----VQDVY-DFNQRIFEEDKAI 310
Query: 488 VLGQ 491
V Q
Sbjct: 311 VEAQ 314
>gi|340778645|ref|ZP_08698588.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
aceti NBRC 14818]
Length = 200
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRACPLHLGSVNEG 274
+FW+PVA+S +K +P VI R DG P +++ CAHR PL G+V+
Sbjct: 46 DFWYPVAWSKKVKSGKAFATRFAGDPIVIVRPDDGSPIYALEDRCAHRQVPLSKGTVDGD 105
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
++C YHGW + G C +P V +K+ PC E+ G+I+I+PGD T+P
Sbjct: 106 VVRCCYHGWSFDRKGSCVTVPYLNKPGVGRGVKTYPCQERSGLIFIFPGDPELAKTVPVP 165
Query: 333 LP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAH 364
+P P H + ++ + + +NL+D+ H
Sbjct: 166 VPCQADNPEFKTRHFDPLVNC--HYSFMHENLMDMNH 200
>gi|427739322|ref|YP_007058866.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374363|gb|AFY58319.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 340
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ ++FW+ VA S LK + ++ E IFRG+DG P +++ C HR L G V
Sbjct: 2 KFEDFWYVVALSNQLKPNKVLSRTILGEWLAIFRGEDGKPVALRDRCIHRNSRLSKGKVC 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+G+I+CPYHGW Y G+ K+PS Q + + + EQ+G I++ +P
Sbjct: 62 QGKIECPYHGWVYDNTGRVVKVPSQANNLCQSKMARCQLYQTKEQDGYIYVRLSSQPSEE 121
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P +P G+E +++ +N +D+ H H F
Sbjct: 122 FTPFKMPLYQQPGWET-VKVINRFNNNVTNCAENFIDVPHTASVHPGIF 169
>gi|418532825|ref|ZP_13098722.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450151|gb|EHN63206.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 359
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 18/185 (9%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNT 258
++++ + P P + W+ F+ +LKD V +P V+FR DG +++
Sbjct: 6 QTMSATAPAFPLDQ-----WYVAGFAWELKDQP-VARTLLGQPVVLFRTADGRVAALEDR 59
Query: 259 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMI 316
C HR PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++
Sbjct: 60 CCHRELPLSCGTVEAAGLRCGYHGLLFSHEGQCLEIPGQERIPAKACVKSFELRERDQIL 119
Query: 317 WIWPGDEPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTH 369
WIW G P ++P PP+ + +H++ V + L+ DNLLDL+H + H
Sbjct: 120 WIWMGATPD--SVPDTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVH 176
Query: 370 TSTFA 374
T
Sbjct: 177 LKTIG 181
>gi|410647609|ref|ZP_11358032.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
gi|410132827|dbj|GAC06431.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
Length = 349
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 140/352 (39%), Gaps = 49/352 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D + + E V +RG +G V++ C HR PL LG V +G
Sbjct: 4 KNCWY-VACTPDEFTNKPLGRQICGERIVFYRGTEGKVSAVEDFCPHRGAPLSLGYVEDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG + DG +MP ++ I+S P E+ G +W+W G+ T P +
Sbjct: 63 LLVCGYHGLKMGCDGSTAEMPGQRVNGFPCIRSYPVVERHGFVWVWTGES--TLADPSKI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH------------------- 369
P + + E + + ++ L++DNL+DL H + H
Sbjct: 121 PELEWANNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDEVPVHTTSE 180
Query: 370 -----TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKP 420
TS F + P + A+ L D P+D F PP V+ +G++
Sbjct: 181 DDMVVTSRFMENVLAPPFWQAALRANHLA---DDVPVDRWQLCRFTPPSQVMIEVGVAHA 237
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE-- 478
G + + + P + + M+ +F P + L E
Sbjct: 238 GNGGYEADPKFKAGSIVVDFITPETETSIWYFWGMARNFR------PEDEALTDQIREGQ 291
Query: 479 -QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQL 529
Q+ +EDL ++ QQ + + L + D GV+ R D + K QL
Sbjct: 292 GQIFSEDLEMLERQQRNLLAYPDRNLLKLNIDTGGVKSRRILDRIIKEECQL 343
>gi|428312063|ref|YP_007123040.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253675|gb|AFZ19634.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA ST+++ + + +P V++R G +++ C HR L G V R
Sbjct: 21 NHWYVVARSTEVQTQPL-GVTLWHQPIVLYRDNSGGVHALEDRCPHRQVKLSHGCVIGDR 79
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TATI 329
++C YHGW++ + G+C +P + +L N KI++ P EQ+G IW++PGD +A I
Sbjct: 80 LECHYHGWQFQSSGECAAVPYLAANQKLPNCKIRTYPVHEQDGFIWLFPGDVETLHSAQI 139
Query: 330 PCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHA 365
+ P I V+E + L++NL+D+ H
Sbjct: 140 QPMGVPEWEHLNYIATVSVIECKAHYSYLIENLMDMYHG 178
>gi|428304442|ref|YP_007141267.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245977|gb|AFZ11757.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 441
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 143/345 (41%), Gaps = 60/345 (17%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVN--EG 274
W+P+A DL P V+++ V + C HR PL G V+ G
Sbjct: 12 WYPIAPLEDLDPKRPTPVTILGRRLVVWKPTVSEQYRVFLDQCPHRLAPLSEGRVDLETG 71
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIWPGDEPP- 325
+ C YHGW+++ +G+C +P + N + +LP + G++W+W ++
Sbjct: 72 NLMCSYHGWQFNPEGECTHIPQAENPDLIAKNKDNFCVVTLPIQQINGLLWVWLDEKSAD 131
Query: 326 -TATIPCLLPPS-----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK---- 375
A+ P L PS GF + + +V +L + L++N+ D +H PF+H
Sbjct: 132 LAASTPLPLSPSIDASKGF-VWSSMVRDLEYDWQTLVENVADPSHVPFSHHGVQGNRKQA 190
Query: 376 -------GWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
S P L++ A+ +G + + F PPC +LE
Sbjct: 191 KPIAMEIAQSTPDLIE----ATLSRG----FATRITFEPPC------------RLEYAME 230
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ--VLNEDLR 486
+ C+P S K+R++ + +FA L HV + W H + VL+ D+
Sbjct: 231 FPGGKKFGLVVYCVPVSPGKSRIVGQFPRNFAKTLHHV--IPRWWDHIQNRNLVLDGDMV 288
Query: 487 LVLGQQERM------NNGANVWNLPVGYDKLGVRYRLWRDALEKG 525
L+ Q+ R+ + + +P D L + +R W D +G
Sbjct: 289 LLHYQEHRLQEYESTQSWKTAYKMPTSADLLVIEFRRWFDKYCQG 333
>gi|258542908|ref|YP_003188341.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|384042829|ref|YP_005481573.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384051347|ref|YP_005478410.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384054454|ref|YP_005487548.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384057689|ref|YP_005490356.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384060330|ref|YP_005499458.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384063621|ref|YP_005484263.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384119631|ref|YP_005502255.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256633986|dbj|BAH99961.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256637046|dbj|BAI03015.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256640098|dbj|BAI06060.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256643155|dbj|BAI09110.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256646210|dbj|BAI12158.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256649262|dbj|BAI15203.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256652249|dbj|BAI18183.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655306|dbj|BAI21233.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 22/209 (10%)
Query: 176 DQTCASPSTSKQ-SLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP 234
DQT + S++++ +++ KGK+ + + S P ++W+PVA+S +LK +
Sbjct: 2 DQTAQTDSSTQELAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 235 FDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 294
P + R G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGTPIALVRPDAGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 295 P---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATI---PCLLPPSGFEIHAEIVMEL 348
P +L N +++ PC EQ+GMI+++PGD P A I P L + +
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGD-PEKADIVPLPAHLARASNPAYKTRYFGT 169
Query: 349 PI--EHGLLLDNLLDLAHAPFTHTSTFAK 375
I + + +NL+D+ H F H+ +
Sbjct: 170 TIGCHYSFMHENLMDMNHQ-FMHSKQMGQ 197
>gi|330993701|ref|ZP_08317635.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329759275|gb|EGG75785.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 353
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T L FW+PVA D+ D + +EP V++R + I + C HR PL LGS
Sbjct: 19 TILARFWYPVALERDVGDRPVAAM-LLDEPLVVYRAGEDI-VIAHDLCPHRGVPLSLGSG 76
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI-------WP 320
+ G I C YHG+ + G+C ++P+ + +++ P + G+IW WP
Sbjct: 77 DGGSIACAYHGFRFGAAGRCVRIPAHPDHAIPSKMHLRTYPAIRRYGLIWTCLRPDGQWP 136
Query: 321 GDEP---PTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
D A IP L+P +GF+ +++ G ++ LD+AH F HT+TFA
Sbjct: 137 DDATAIMANADIP-LMPHWQDAGFQQIVCPSIDIHGFAGRQMEGFLDVAHFAFVHTATFA 195
>gi|186472930|ref|YP_001860272.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184195262|gb|ACC73226.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 374
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S ++K EP V+ R + G +++ CAHR PL G V+
Sbjct: 31 DHWYPLAWSREVKRGKTHAVRFAGEPIVLARTESGKVIALEDRCAHRQVPLSGGVVDGEA 90
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
I+C YHGW Y GKC +P + +++ PC E EG+I+++PG T P L
Sbjct: 91 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRAYPCCESEGLIFVFPGKAELAETTP--L 148
Query: 334 PPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
PP G + E+ + + +NL+D+ H F H K
Sbjct: 149 PPLGSVANKAYKTRRFGREVACHYSFMHENLMDMNHQ-FLHRKQMGK 194
>gi|453330570|dbj|GAC87316.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
thailandicus NBRC 3255]
Length = 371
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+PVA+S +++ + +P + R +DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHEVQRGKTIGTRYAGQPIALVRPQDGSVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 333 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 379
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 380 PSLVK 384
P+LV+
Sbjct: 210 PTLVE 214
>gi|367475962|ref|ZP_09475388.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
gi|365271749|emb|CCD87856.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
Length = 347
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 131/329 (39%), Gaps = 37/329 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++K ++P + V++R DG +++ C HR PL G +
Sbjct: 8 NAWYAAAWDAEVKQ-ALLPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDT 66
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG ++S G+C MPS + N +++ P E+ IW+W G+ P P +
Sbjct: 67 VVCGYHGLKFSPQGRCAFMPSQETINPSACVRAYPAVERHRFIWLWMGE--PALADPATI 124
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------------G 376
P + +++ ++ L++DNL+DL H F H S+ G
Sbjct: 125 PDMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHG 184
Query: 377 WSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
++ + F G G D + I + F PC V +G++ G +
Sbjct: 185 ERTATVTRWMRGIEPPPFWAKQLGKPGLVDRWQI-IRFEAPCTVTIDVGVAPTGTGAPEG 243
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
R + L+ P + K + + ++ + + R + ED +
Sbjct: 244 DRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLSEQR---LTTEIREGVSGIFREDEFI 300
Query: 488 VLGQQERM--NNGANVWNLPVGYDKLGVR 514
+ QQ M N G +NL + + R
Sbjct: 301 LEAQQRAMDENPGRVFYNLNIDAGAMWAR 329
>gi|410943073|ref|ZP_11374814.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter
frateurii NBRC 101659]
Length = 371
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+PVA+S +L+ + +P + R DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHELQRGKTIGTRYAGQPIALVRPLDGTVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 333 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 379
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 380 PSLVK 384
P+LV+
Sbjct: 210 PTLVE 214
>gi|284928660|ref|YP_003421182.1| ring-hydroxylating dioxygenase, large terminal subunit
[cyanobacterium UCYN-A]
gi|284809119|gb|ADB94824.1| ring-hydroxylating dioxygenase, large terminal subunit
[cyanobacterium UCYN-A]
Length = 349
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 155/352 (44%), Gaps = 36/352 (10%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T L+N W+ S DLK ++ EP +I R K+G +++ C HR PL GS+
Sbjct: 3 TLLRNCWYVAVSSKDLKPKKIIHKKILGEPILIGRKKNGQVFAMRDICPHRGIPLSYGSL 62
Query: 272 NEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW----- 319
++ I C YHGW+++T +GKC+++PS + +++ + PC E +G IWI+
Sbjct: 63 DQDDITCRYHGWKFNTNNGKCKEIPSLTKYDNLDVERIQVLTYPCEEVQGNIWIYFINTN 122
Query: 320 -----PGDEPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
D P TIP L P I + I+H ++ L+D AH P+ H +
Sbjct: 123 KSQSKSTDIPSVPTIPDFGKLSPG---ITETMQFSCNIDHAII--GLMDPAHGPYIHDAW 177
Query: 373 FAKGWSVPSLVKFLTPASGLQGY-WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
+ + VK QG+ Y + + RP ++ + I +L G T
Sbjct: 178 WWRSGPRKFRVKEKHYEPVSQGFRLVSYNMPVSARPYKILGKDVSIEIIFQLPGVRTEIL 237
Query: 432 ATHLHQ--LHVCLPSSRKKTRLLYR---MSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 486
+ L C+ + + +++ ++ +A+V K P + L R F L +D
Sbjct: 238 KGDRYSACLLTCITPIDEYSCEIFQSVYWTIPWAAVFK--PLLSLLTRQF----LAQDRD 291
Query: 487 LVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
++ QQE + ++ + + +RL ++ +PF+ P+ +
Sbjct: 292 AIIQQQEGLMYDPSLMLIDDADTQAKWYFRLKQEYQRSQENNIPFVNPLDPK 343
>gi|414341295|ref|YP_006982816.1| ring hydroxylating dioxygenase subunit alpha [Gluconobacter oxydans
H24]
gi|411026630|gb|AFV99884.1| ring hydroxylating dioxygenase alpha subunit [Gluconobacter oxydans
H24]
Length = 371
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+PVA+S +++ + +P + R +DG +++ CAHR PL LG V+
Sbjct: 35 DYWYPVAWSHEVQRGKTIGTRYAGQPIALVRPQDGSVFALEDRCAHRQVPLSLGRVSGEA 94
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD T P
Sbjct: 95 VQCCYHGWAYGRSGRCIDVPYLGKNKLPN-GVRTYPCREEGGLIFIFPGDPAKADTTPF- 152
Query: 333 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST-------FAKGWSV 379
PS + ++ + + +NL+D+ H F H F G
Sbjct: 153 --PSLGSVRDPAYKTRRFGKKVACHYSFMHENLMDMNHQ-FMHMKQMGQMKPRFLGGKDE 209
Query: 380 PSLVK 384
P+LV+
Sbjct: 210 PTLVE 214
>gi|239814693|ref|YP_002943603.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801270|gb|ACS18337.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 449
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 260
L GP +P L+ +W PVA +++ D + P E V+++ G G V C
Sbjct: 10 LTEVGPGKPMGDYLRRYWHPVAGASEFDDKAVKPLRILGEDLVLYKDLGGNYGLVDRRCP 69
Query: 261 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQ 312
HR + G V + ++C YHGW+Y G+C P + RN KIK+ P E+
Sbjct: 70 HRNADMSYGFVEQCGLRCSYHGWQYDQSGQCVHQPFEETLDPDARMRRNTKIKAYPVQEK 129
Query: 313 EGMIWIWPGDEPPTATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHA 365
G++W + G +P LLP +GF + E+P +N +D H
Sbjct: 130 AGLLWAYMGPQPAP-----LLPDWELFNFRNGFA--QAVFAEIPCNWFQCQENSIDPVHF 182
Query: 366 PFTHTS 371
+TH +
Sbjct: 183 EWTHNN 188
>gi|2271500|gb|AAC27107.1| vanillate demethylase [Acinetobacter sp. ADP1]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 141/349 (40%), Gaps = 55/349 (15%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG +GK MP+ ++ K+ E+ G IW+WPG++ +
Sbjct: 62 GHLVCGYHGLVMGCEGKTIAMPAQRVGGFPCNKAYAVVEKYGFIWVWPGEK--SLANEAD 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
LP + H E + + ++ L++DNL+DL H + H+S+ + +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ-----KEIDEAL 174
Query: 388 PASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGI 417
P + + G +W D P+D F P V +G+
Sbjct: 175 PVTKVDGDHVVTERYMENIIAPPFWQMALRGNHLADDVPVDRWQRCHFFAPSNVHIEVGV 234
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCL-PSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
+ G G N + L L + + P + + M+ +F P Q L
Sbjct: 235 AHAGH-GGYNAPKTRKSLQWLSIVVTPETETSHWYFWGMARNFQ------PENQQLTDQI 287
Query: 477 AE---QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDAL 522
E ++ EDL ++ QQ+ + L + D GV+ R D L
Sbjct: 288 REGQGKIFTEDLEMLEQQQQNIVRNPQRQLLMLNIDAGGVQSRKIIDRL 336
>gi|329114531|ref|ZP_08243290.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
gi|326696011|gb|EGE47693.1| Vanillate O-demethylase oxygenase subunit [Acetobacter pomorum
DM001]
Length = 372
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 15/159 (9%)
Query: 176 DQTCAS-PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP 234
DQT + ST +++ KGK+ + + S P ++W+PVA+S +LK +
Sbjct: 2 DQTAQTDSSTPALAVEARKGKIDLRRVR-SNP---------DYWYPVAWSRELKPGKTIG 51
Query: 235 FDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM 294
P + R +G +++ CAHR PL G+V ++C YHGW Y G+C +
Sbjct: 52 TRYAGMPIALVRPDEGPVFALEDRCAHRQVPLSKGTVEGASVKCCYHGWAYGRSGRCIDV 111
Query: 295 P---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
P +L N +++ PC EQ+GMI+++PGD T+P
Sbjct: 112 PYLGKGKLPN-GVRTFPCREQDGMIFVFPGDPEKADTVP 149
>gi|108757336|ref|YP_635237.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461216|gb|ABF86401.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 376
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 28/198 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK+FW+ ST+LK + F V+FR G P +++ C HR L G+V
Sbjct: 15 LKDFWYVACLSTELKPGEPLARTLFGTGVVLFRDVQGQPTALRDRCLHRNARLSRGAVFN 74
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNV----------------KIKSLPCFE 311
GRI CPYHGW Y G ++PS ++L + ++ P E
Sbjct: 75 GRIGCPYHGWVYDASGAVVEVPSLGPSQRSELLDADACAREGLATAPCALGRLTRFPTLE 134
Query: 312 QEGMIWIWPGDEPPTATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
Q+G+++++ G P + P +P G+ ++ +V P L++N +D+ H F
Sbjct: 135 QDGLVFVYMGGAEPARSAPFRVPYWDQEGWTVYF-MVTRFPNGVTNLVENFMDVPHTLFV 193
Query: 369 HTSTFAKGWS--VPSLVK 384
H F + S VP+ V+
Sbjct: 194 HPGWFRRPASKRVPATVR 211
>gi|325914417|ref|ZP_08176764.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
vesicatoria ATCC 35937]
gi|325539425|gb|EGD11074.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
vesicatoria ATCC 35937]
Length = 350
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ PF +EP V++R G++ + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVG---QAPFKATLLDEPLVLYRLGEELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPTQNIPAKMRLHTYAVAERYGLIWVCLAKPAD 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSEAEVQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPSFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|298709173|emb|CBJ31116.1| Pheophorbide a oxygenase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 532
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 204 SGPVQPYNTRLKNF-----WFPVAFSTDL--KDDTM-VPFDCFEEPWVIFRG-KDGIPGC 254
SG P ++ F W+PVA DL +D M P E V+++ KDG
Sbjct: 27 SGSAAPDTSKQAGFQWRRQWYPVAVMRDLEARDPRMPYPVQLMGEGLVVWKDPKDGGWKA 86
Query: 255 VQNTCAHRACPLHLGSVNE--GRIQCPYHGWEYSTDGKCEKMPST------QLRNVK--- 303
+ C HR PL G V++ GR+QC YHGWE+ DGKC +P +N K
Sbjct: 87 FADRCPHRWAPLSEGRVDQESGRLQCIYHGWEFEGDGKCGSIPQATPGSRETAQNSKRAC 146
Query: 304 IKSLPCFEQEGMIWIWPGDEP---------PTATIPCLLPPSGFEIHAEIVMELPIEHGL 354
++P EG +W+WP P P AT+P L SG +L
Sbjct: 147 ATAIPTKVVEGKLWLWPDPSPEGVKESETVPPATVPGLDFGSGDFGGNWYCRKLAYGFDT 206
Query: 355 LLDNLLDLAHAPFTH 369
L++NL D AH PF H
Sbjct: 207 LIENLADPAHVPFAH 221
>gi|445407257|ref|ZP_21432263.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
gi|444781031|gb|ELX04954.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
Naval-57]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPVQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|294651298|ref|ZP_06728621.1| vanillate O-demethylase oxygenase [Acinetobacter haemolyticus ATCC
19194]
gi|292822811|gb|EFF81691.1| vanillate O-demethylase oxygenase [Acinetobacter haemolyticus ATCC
19194]
Length = 358
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ ++ D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEILDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ + K+ E+ G IWIWPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRTHGFPCNKAYAVIEKYGFIWIWPGEK--ALADESK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWAEHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|440737591|ref|ZP_20917155.1| oxidoreductase subunit alpha [Pseudomonas fluorescens BRIP34879]
gi|440381947|gb|ELQ18460.1| oxidoreductase subunit alpha [Pseudomonas fluorescens BRIP34879]
Length = 346
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C E+ V +R +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDELAQKPLGRQICGEK-LVFYRDHTDQVRALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKAFAAVERHGFIWVWPGDQ--AQADPALI 120
Query: 334 P-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P S + + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 PHLEWADSEHWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP V+ +G++
Sbjct: 176 VTTVEGDEVVTARHMQNIMAPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVMIEVGVA 235
Query: 419 KPGK 422
GK
Sbjct: 236 HAGK 239
>gi|390993286|ref|ZP_10263466.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372551979|emb|CCF70441.1| rieske [2Fe-2S] domain protein [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 350
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|330466146|ref|YP_004403889.1| oxidoreductase subunit alpha [Verrucosispora maris AB-18-032]
gi|328809117|gb|AEB43289.1| oxidoreductase subunit alpha [Verrucosispora maris AB-18-032]
Length = 347
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 35/277 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
++ W+ A+ +++ + ++ EP V++R G + + C HR PL ++
Sbjct: 5 RDQWYVAAYGSEVGRE-LLARTVLGEPLVLYRTGAGEAVALADRCVHRRYPLSESRLDGD 63
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPT--ATIP 330
I C YHG+ Y G C +P Q R ++ + P EQ+ +W++ GD ATIP
Sbjct: 64 TIVCGYHGFTYDRTGSCVFVPGQQRIPRTARVAAYPVVEQDSFVWVFIGDRDRADPATIP 123
Query: 331 ---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK--- 384
L P + + L +GLL+DNL+DL+H + H + +
Sbjct: 124 RAPWLTDPRYAVVRG--MAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANTPITTEV 181
Query: 385 --------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKL- 423
F ++G+QG + D+E+ PPC+ L I+ G
Sbjct: 182 DDERGIVYVSRHMDDAECPPFYARSTGIQGRITRWQ-DIEYHPPCLYLLHSRIAPQGVYP 240
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
Q A H ++ PS+ T + ++ DFA
Sbjct: 241 PAQGEDNEAFHAEIVYAITPSTEHTTYDFWAVARDFA 277
>gi|114765025|ref|ZP_01444172.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
gi|114542572|gb|EAU45597.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
Length = 356
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 105/264 (39%), Gaps = 31/264 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +ST++ DD + F + V+FR DG +++ C HR PL G
Sbjct: 5 VKNAWYVAGWSTEI-DDELRRFTILGDNVVMFRKSDGAVAALEDRCPHRLLPLSKGKRIG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS-TQL-RNVKIKSLPCFEQEGMIWIWPG-----DEPPT 326
+QC YHG + G C ++P T L ++ + S P E+ G++WIW G DE
Sbjct: 64 DTVQCGYHGLTFDCSGACVRVPGQTNLPKSAYVISYPIVEKHGIVWIWMGDPEKADEAQV 123
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS--VPSLVK 384
+P P+ H + + L + + +NL+D AH F H +T S VP V+
Sbjct: 124 FDMPEFSDPAWAAHHGD-ALHLKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVPVHVQ 182
Query: 385 -------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
F G G D + PC + G + K
Sbjct: 183 TEGEAIVAWRWIRDAEPIGFFKAFGGFSGNVDRWHY-YYLYTPCTAVIDFGSIETEKKCA 241
Query: 426 QNTRQCATHLHQLHVCLPSSRKKT 449
+ R + LH P + T
Sbjct: 242 EEDRGEGVRIFALHFMTPVTETYT 265
>gi|312960146|ref|ZP_07774658.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285640|gb|EFQ64209.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 347
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ ++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGNEIKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++CPYHG E+ G C P + KIK+ P E+ ++WIW GD P
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKIKAYPLVERYSLLWIWMGD--PHLADA 121
Query: 331 CLLPPSGF--EIHAEI---VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 ALIPDFNCMDEDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|428771008|ref|YP_007162798.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685287|gb|AFZ54754.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 468
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 128/322 (39%), Gaps = 51/322 (15%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRA 263
G P K W+PV F DL D F +E VI+ KD Q+ C HR
Sbjct: 21 GGEDPNKFDYKEVWYPVFFVNDLHKDKPSRFTLLDEDLVIWWDKKDQQWRVFQDMCPHRL 80
Query: 264 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-------IKSLPCFEQEGM 315
PL G ++E G ++CPYHGW +S G C+ +P + +KS P M
Sbjct: 81 APLSTGRIDEDGLLECPYHGWTFSGKGDCQSIPQQPEGENRHKSPRACVKSYPSAIAHDM 140
Query: 316 IWIWPGDE------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
++++ G + P T P + + I + ++P + LL+N+LD +H +TH
Sbjct: 141 LFVYAGKKENAFLTPMPITQPLIENVEKWTI-LKTFRDIPYDALTLLENVLDSSHVSYTH 199
Query: 370 TSTFA-KGWSVPSLVKFLTP-ASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
T + + P ++ T G G+W P + GKL Q+
Sbjct: 200 HGTVGNRSNAAPVELEVKTADRQGFTGFWAEGP------------------RKGKLGSQS 241
Query: 428 TRQCATHL--HQLH-----------VCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYL 472
T A +L H L P S+ K R+ FAS + +
Sbjct: 242 TTFIAPNLMWHDLTSKQLGRTMTVVYVTPISKGKCRVFALFPFQFASKIPQFFIKLTPQW 301
Query: 473 WRHFAEQVLNEDLRLVLGQQER 494
+ H + + ED ++ L QER
Sbjct: 302 YSHLNQNTILEDDQIFLHYQER 323
>gi|161522387|ref|YP_001585316.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189348737|ref|YP_001941933.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia multivorans ATCC 17616]
gi|160345940|gb|ABX19024.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189338875|dbj|BAG47943.1| putative ring-hydroxylating dioxygenase large terminal subunit
[Burkholderia multivorans ATCC 17616]
Length = 370
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 298
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 299 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEH 352
+ +++ PC E G+I+++PGD P L S G++ E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRGYKTR-RFGREVKCHY 173
Query: 353 GLLLDNLLDLAHAPFTHTSTFAK 375
+ +NL+D+ H F H +
Sbjct: 174 SFMHENLMDMNHQ-FLHRKQMGQ 195
>gi|377807676|ref|YP_004978868.1| vanillate monooxygenase [Burkholderia sp. YI23]
gi|357938873|gb|AET92430.1| vanillate monooxygenase [Burkholderia sp. YI23]
Length = 351
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 124/314 (39%), Gaps = 47/314 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A+++++ + P E + +R DG + C HR PL +G +
Sbjct: 12 LKNAWYVGAWASEVTR-ALTPRTILNEAVLFYRKTDGSAAAIGGICPHRFAPLSMGKLVG 70
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+QC YHG ++ GKC P + K+KS P E+ +IW+W G+ P
Sbjct: 71 DEVQCGYHGLQFDCSGKCTGTPIDKKVPAAAKVKSWPLVEKYNLIWLWMGE--PERADES 128
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH----------------- 369
L+P + + + V + + L++DNL DL H F H
Sbjct: 129 LIPDFSYLLDSNRKILSGVTHVKANYELIVDNLADLTHTHFLHGNFLHTEAVKQTQHQVM 188
Query: 370 ---TSTFAKGW----SVPSLV-KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG 421
T+ +K W VP L+ K++ + W ++ + P + G + G
Sbjct: 189 QEGTTVHSKFWFPDGRVPPLMGKYMDDPELIVDRW----TEIRWDAPATIRLNAGATPTG 244
Query: 422 KLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVL 481
K + + THL P + T Y + F P L R + +
Sbjct: 245 KPREEGIQAYGTHL-----LTPETEHSTHYFYAHARSFKI---DDPATDVLVREWQQVAF 296
Query: 482 NEDLRLVLGQQERM 495
NE + ++ Q+++
Sbjct: 297 NEQDKPMIEAQQKI 310
>gi|260557454|ref|ZP_05829669.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|260409080|gb|EEX02383.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
ATCC 19606 = CIP 70.34]
gi|452953922|gb|EME59331.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii MSP4-16]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPVQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIHCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|425076775|ref|ZP_18479878.1| hypothetical protein HMPREF1305_02688 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425087408|ref|ZP_18490501.1| hypothetical protein HMPREF1307_02857 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405592484|gb|EKB65936.1| hypothetical protein HMPREF1305_02688 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405604132|gb|EKB77253.1| hypothetical protein HMPREF1307_02857 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 345
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDITG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPHETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|307150004|ref|YP_003885388.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306980232|gb|ADN12113.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 349
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 44/357 (12%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T L+NFW+ + +LK +V EP +I R DG +++ C HR PL G
Sbjct: 2 TTLLRNFWYVALAAKNLKAGQLVGKKMLGEPVLIGRKADGEVFAMRDICPHRGIPLRHGW 61
Query: 271 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 323
+ + C YHGW++ T DG+C ++PS R +++++ P E +G IW++ E
Sbjct: 62 LEGDDVCCCYHGWKFDTKDGRCSEIPSLTEYDKLDFRRIQVQTYPAREIQGHIWVYIPSE 121
Query: 324 ----------PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
PP T+P + +I ++ ++ L+D AH P+ H++ +
Sbjct: 122 AKRNLDESELPPVPTVPD-FGKTAPQIAETSHFACDVDQAVI--GLMDPAHGPYVHSAWW 178
Query: 374 AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR-QCA 432
+ VK + ++P P+ P M +S +KP KL G +
Sbjct: 179 WRSGPRKFRVK--------EKLYEPVPMGFRLAPYEMPVS----AKPYKLLGNKVSIEIV 226
Query: 433 THLHQL-HVCLPSSRKKTRLLYRMS-LD------FASVLKHVPFM---QYLWRHFAEQVL 481
L L L R K LL ++ +D S+ +P++ + + R+ + L
Sbjct: 227 FQLPTLRQEILRGDRHKACLLTAITPIDENQCEVHQSIYWTIPWLGIFKPIMRYLTVEFL 286
Query: 482 NEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
N+D +V+ QQE ++ ++ + + + L R+ + PF P++ +
Sbjct: 287 NQDRDVVIKQQEGLSYHPSLMLIDDADTQAKWYFSLKREYERSQQENRPFNNPVEAK 343
>gi|447916147|ref|YP_007396715.1| oxidoreductase subunit alpha [Pseudomonas poae RE*1-1-14]
gi|445200010|gb|AGE25219.1| oxidoreductase subunit alpha [Pseudomonas poae RE*1-1-14]
Length = 346
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ +L + C E+ V +R +++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDELAHKPLGRQICGEK-LVFYRDHTDQVRALEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPGD+ P L+
Sbjct: 63 NLVCGYHGLVMGGDGKTVEMPGQRVRGFPCNKAFAAVERHGFIWVWPGDQ--AQADPALI 120
Query: 334 P-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
P S + + ++ ++ L++DNL+DL H + H S+ + + P
Sbjct: 121 PHLEWADSEHWAYGGGLFDIQCDYRLMIDNLMDLTHETYVHASSIGQ-----KEIDEAPP 175
Query: 389 ASGLQG----------------YW----------DPYPIDM----EFRPPCMVLSTIGIS 418
+ ++G +W D P+D F PP V+ +G++
Sbjct: 176 VTTVEGDEVVTARHMQNIMAPPFWRMALRGNQLADDVPVDRWQICRFSPPSHVMIEVGVA 235
Query: 419 KPGK 422
GK
Sbjct: 236 HAGK 239
>gi|221065066|ref|ZP_03541171.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|57116474|gb|AAW33716.1| IvaA [Comamonas testosteroni]
gi|220710089|gb|EED65457.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 359
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 18/184 (9%)
Query: 200 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTC 259
+++ + P P + W+ F+ +LKD V +P V+FR +DG +++ C
Sbjct: 7 TMSAAAPAFPLDQ-----WYVAGFAWELKD-LPVARTLLGQPVVLFRTEDGRVAALEDRC 60
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIW 317
HR PL G+V ++C YHG +S +G+C ++P + K +KS E++ ++W
Sbjct: 61 CHRELPLSCGTVEAAGLRCGYHGLLFSHEGQCLEIPGQERIPTKACVKSFELRERDQILW 120
Query: 318 IWPGDEPPTATIPCLLPPSGFEIHAEI-------VMELPIEHGLLLDNLLDLAHAPFTHT 370
IW G P ++P PP+ + +H++ V + L+ DNLLDL+H + H
Sbjct: 121 IWMGATP--DSVPGTEPPA-YAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHL 177
Query: 371 STFA 374
T
Sbjct: 178 KTIG 181
>gi|407711022|ref|YP_006794886.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407239705|gb|AFT89903.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 361
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 47/328 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A S+++ + + +EP V +R G + + C HR PL G + +
Sbjct: 4 LLNTWYVAALSSEVAANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVD 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----------VKIKSLPCFEQEGMIWIWPGDE 323
G ++CPYHG + DG+C P RN + + P E+ G +W WPGD
Sbjct: 64 GALECPYHGLRFGADGRCVFNPHGN-RNGNDTASPPARAQARHYPVRERYGAVWFWPGDP 122
Query: 324 PPTATIPC-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
A P L P F + + L DNLLDL+H + H T
Sbjct: 123 ERAAHTPLPAFDYLDPRENFTTGR--YLHTRANYQLSADNLLDLSHFQYLHPETLGSEQM 180
Query: 379 VPSLVK-----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIG 416
+V+ +L P + L G +D+ + PP ++ +
Sbjct: 181 ASGVVRATVAGDSVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVHWMPPGLLTIVVR 240
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
IS+ G E + A H P + + + L A + +
Sbjct: 241 ISESGLPETAREAKSA------HWLTPETAMSSHYFFAFGLPRAMGEHGAELVSRTAQSL 294
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNL 504
+ED+ ++ QQ RM + W+L
Sbjct: 295 LAPFRDEDIPMLEAQQ-RMMGERDFWSL 321
>gi|334345778|ref|YP_004554330.1| Rieske (2Fe-2S) domain-containing protein [Sphingobium
chlorophenolicum L-1]
gi|334102400|gb|AEG49824.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sphingobium
chlorophenolicum L-1]
Length = 351
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 29/266 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L W+ A ST++ + + + +I+R DG + + C HR PL LG +
Sbjct: 8 LMKAWYAAALSTEVDGEQLFHRKILGKSVLIYRTADGKAVAMHDRCPHRFAPLSLGKRDG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPG-DEPPTATI 329
+I CPYH +++ G+C P + ++ + P E+ G +WIW EP + +
Sbjct: 68 DQISCPYHALKFNAQGQCTHNPHGNGHIPKAAQVDTFPIEERYGFLWIWMDPSEPDLSLL 127
Query: 330 PCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF-AKGWSVPSLV 383
P P P+ A M LP+ + L++DN++DL+H H +G P +
Sbjct: 128 PDYSPLDIGHPNAL---AHTYMHLPVNYELIIDNVMDLSHIDHVHGEIITTRGKLSPIVP 184
Query: 384 KFLTPASGLQGYWD--PYPIDMEFRP-------PCMVLSTIGISKPGKL-------EGQN 427
A + W+ P M F P I S P + + +
Sbjct: 185 TLRETARNISARWEWSQQPAMMIFAPFLARAGDEAKQFFDITWSAPANIQLTVAAVQDSD 244
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLY 453
+ A + LH C P+ T +
Sbjct: 245 SFDDALDQYDLHTCTPAGPFSTHYFF 270
>gi|407713671|ref|YP_006834236.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235855|gb|AFT86054.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 357
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T L+N W+ A+ +++ D + +E V+FR + + + C HR PL +G +
Sbjct: 2 TYLRNCWYVAAWDSEVLSDKPLARTLLDEKIVLFRDANNTAVALADRCPHRFAPLSMGEL 61
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT-- 326
+G ++C YHG ++ +DGKC P +++ P E+ +IWIW GD+
Sbjct: 62 CQGNVRCSYHGLQFGSDGKCVHNPHGNGIIPATAVVRAYPVVERYSVIWIWMGDKSKADD 121
Query: 327 ATIP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
A IP L P + + A+ + + L DN++DL+H F H T
Sbjct: 122 ALIPEYRGLDPETAYV--AKDYLYAKANYVLETDNIMDLSHIEFLHPETLGS 171
>gi|384429766|ref|YP_005639127.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341938870|gb|AEL09009.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVKH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|50084184|ref|YP_045694.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. ADP1]
gi|49530160|emb|CAG67872.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ADP1]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENKVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG +GK MP+ ++ K+ E+ G IW+WPG++ +
Sbjct: 62 GHLVCGYHGLVMGCEGKTIAMPAQRVGGFPCNKAYAVVEKYGFIWVWPGEK--SLANEAD 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|308205532|gb|ADO19015.1| rieske (2Fe-2S) domain protein [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 336
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 15/174 (8%)
Query: 214 LKNFWFPVAFSTDLKDD-TMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
LKNFW+ FS+ + D VP + +V++R + C HR L G +
Sbjct: 9 LKNFWYACEFSSVITDKPKRVPL--LSQQFVLYRNSQKQIVAFLDQCPHRGAALSNGWLE 66
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDE---- 323
I+CPYHGW+Y DG C ++P+ Q + ++ + P E+ G +W++ GD
Sbjct: 67 NDCIRCPYHGWKYQADGTCIEIPANQPGVPISKKARLITYPVQEKYGFVWLFWGDLPQRE 126
Query: 324 -PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
PP + P + PS + E + + L++N +D AH+ F H ++F G
Sbjct: 127 CPPLPSFPEVKDPSLRSV--EFEFKWNAHYTRLVENSIDPAHSAFVHANSFGSG 178
>gi|374316567|ref|YP_005062995.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
gi|359352211|gb|AEV29985.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
Length = 322
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+ + S ++K + V+FR +G GCV + C HR L G +
Sbjct: 2 IPNQWYAILPSREVKRGALYAVKRVNLDLVLFRDAEGKLGCVVDQCPHRGAALSAGKLAG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIWPGD-EPPT 326
++CP+HG E+ T+G C ++P+ + +K P E G+I++W G+ E T
Sbjct: 62 SHVRCPFHGLEFDTEGNCRRIPANGNASKEDISRYNVKQYPVQELMGIIYLWFGESEKAT 121
Query: 327 ATIPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
A++P + F ++E + ++N LD+ H P H +T KG
Sbjct: 122 ASVPFFHDQIDNSFS-YSEFPDHWNAHYSRCIENQLDVVHVPIVHYNTIGKG 172
>gi|21229841|ref|NP_635758.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766718|ref|YP_241480.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111340|gb|AAM39682.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66572050|gb|AAY47460.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. 8004]
Length = 358
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ ++K + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVKH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|87303595|ref|ZP_01086374.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
gi|87281819|gb|EAQ73783.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
Length = 457
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 34/307 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF---RGKDGIPG----CVQNTCAHRACPLH 267
+N W+PVAF DL F + V++ +G PG + C HR PL
Sbjct: 22 RNAWYPVAFLRDLDPARPTGFTLLGDDLVLWFDRKGDAAQPGGQWRAFADVCPHRLVPLS 81
Query: 268 LGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL------RNVKIKSLPCFEQEGMIWIWP 320
G +N G ++CPYHGW + G+C +P R ++ +GM++++
Sbjct: 82 EGRLNAAGELECPYHGWTFDGQGRCTAIPQASEGSQPSDRRSSCRAYATASGQGMLFVFA 141
Query: 321 GDEPPTATIPCLLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
G A +P L P E A + +LP + LL+N+LD++H PFTH +T +
Sbjct: 142 GAPEAAAAVPLPLVPVLEETEAGWLVQDTFRDLPYDALTLLENVLDVSHVPFTHHATVGR 201
Query: 376 GWSVPSLVKFLTPA--SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCAT 433
+ + L A G G W+ P R + PG + T +
Sbjct: 202 RETAGPVDLRLEQAGPGGFSGVWEEGP-----RRGKLGSQFTTFLAPGLMWHDLTARGFA 256
Query: 434 HLHQLHVCLPSSRKKTRLLYRMSLDFAS-----VLKHVPFMQYLWRHFAEQVLNEDLRLV 488
+ + P+ + RL R F S +L+ P Q+L +H + ED ++
Sbjct: 257 RILTVVYATPTRPGECRLFARFPFQFESSWPGRLLRLRP--QWL-QHIGNHTVLEDDQIF 313
Query: 489 LGQQERM 495
L QER+
Sbjct: 314 LHWQERV 320
>gi|294083911|ref|YP_003550668.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663483|gb|ADE38584.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L + W+ +S+D + ++ P E VIFR G+ +++ C HR PL G + +
Sbjct: 9 LFDSWYVAGWSSDFEH-SLTPLTILGEHVVIFRTAKGVAVALEDACPHRKLPLSHGRLQD 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR--NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
R++C YHG + G C P+ Q +V +KS P ++ G++WIW G P A
Sbjct: 68 DRVECGYHGLTFDCSGHCVHAPTQQNSPPDVSVKSYPVEDRYGLLWIWMG-APEAANTDE 126
Query: 332 LLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ ++ A M++ + + DNLLD +H + H S+FA
Sbjct: 127 IFRIENYDNPAWGKTRGGSMDVACHYLYVTDNLLDPSHVAWVHVSSFA 174
>gi|320160752|ref|YP_004173976.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994605|dbj|BAJ63376.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 327
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+ V S +++ V E V +R KDG C+ + C H L G V E
Sbjct: 2 IPNQWYVVLESREVRVGRPVGAVRMGEKMVFWRRKDGKVVCMADRCPHLGASLSRGKVVE 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
+ CP+H +E+ G C +P+ + ++IKS P +E G IWI+ G+ P
Sbjct: 62 DHLACPFHAFEFDPGGACVYIPALGRNTPPPKAMRIKSYPTYEAHGFIWIYWGE--PQGE 119
Query: 329 IPCLLPPSGFEI-----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
LLPP F+I +A P+ + +++N LD+ H P HT T +G V
Sbjct: 120 ---LLPPKFFDIDETFSYAGYRQLWPVHYSRMVENQLDVMHLPHVHTDTIGRGRKV 172
>gi|323530310|ref|YP_004232462.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323387312|gb|ADX59402.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 361
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 47/328 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A S+++ + + +EP V +R G + + C HR PL G + +
Sbjct: 4 LLNTWYVAALSSEVTANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVD 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN----------VKIKSLPCFEQEGMIWIWPGDE 323
G ++CPYHG + DG+C P RN + + P E+ G +W WPGD
Sbjct: 64 GALECPYHGLRFGADGRCVFNPHGN-RNGNDTASPPARAQARHYPVRERYGAVWFWPGDP 122
Query: 324 PPTATIPC-----LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
A P L P F + + L DNLLDL+H + H T
Sbjct: 123 ERAAHTPLPAFHYLDPRENFTTGR--YLHTRANYQLSADNLLDLSHFQYLHPETLGSEQM 180
Query: 379 VPSLVK-----------------FLTPA-----SGLQGYWDPYPIDMEFRPPCMVLSTIG 416
+V+ +L P + L G +D+ + PP ++ +
Sbjct: 181 ASGVVRATVAGDTVSVRREMKGEYLRPMLTQSFNLLYGERADRELDVHWMPPGLLTIVVR 240
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHF 476
IS+ G E + A H P + + + L A + +
Sbjct: 241 ISESGLPETAREAKSA------HWLTPETAMSSHYFFAFGLPRAMGEHGAELVSRTAQSL 294
Query: 477 AEQVLNEDLRLVLGQQERMNNGANVWNL 504
+ED+ ++ QQ RM + W+L
Sbjct: 295 LAPFRDEDIPMLEAQQ-RMMGERDFWSL 321
>gi|423696632|ref|ZP_17671122.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003095|gb|EIK64422.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 347
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 10/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ T++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGTEVKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++CPYHG E+ G C P + K+K+ P E+ ++WIW GD P
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKVKAYPLAERYSLLWIWMGD--PHLADA 121
Query: 331 CLLPPSGF--EIHAEI---VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 TLIPDFNCMDEDHWYVGKRYLHARANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|89056443|ref|YP_511894.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88865992|gb|ABD56869.1| vanillate demethylase subunit A [Jannaschia sp. CCS1]
Length = 340
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A+S ++ D T+ P E V++R +DG P +++ C HR PL G++
Sbjct: 3 LKNCWYVAAWSHEI-DRTLQPQTFLGENVVLYRKQDGTPVALEDACPHRKLPLSDGALQG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHG + G C P+ + + +KS P ++ WIW GD P A
Sbjct: 62 DTVECGYHGLTFDCAGACVAAPTQKDAIPKRATVKSYPVVDRYRFTWIWMGD-PAEADPD 120
Query: 331 CLLPPSGFEIHA-----EIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+ P F+ V+++ + ++DNLLD +H + H ++FA G
Sbjct: 121 LIFPIPNFDDPTWGKTDGGVLDIDCNYLWVVDNLLDPSHVAWVHVTSFAGG 171
>gi|388544418|ref|ZP_10147706.1| vanillate demethylase oxygenase subunit [Pseudomonas sp. M47T1]
gi|388277601|gb|EIK97175.1| vanillate demethylase oxygenase subunit [Pseudomonas sp. M47T1]
Length = 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 230 DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDG 289
D + P +P+V FR + G + + C HR L G + +QCPYHGW +S DG
Sbjct: 10 DGLSPVQLLGQPFVAFRDEHGQARLLSDVCVHRGGSLSAGGKVDASVQCPYHGWRFSADG 69
Query: 290 KCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGD-----EPPTATIPCLLPPSGFEI 340
C +P+ + +K + P E+ G IW + GD PP + + P+ +
Sbjct: 70 VCTHIPAQPHARIPLKARVDAYPTVERHGWIWAFLGDLPEAERPPLPALDWVDDPAVRVV 129
Query: 341 HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ + +++N LD AHAPF H +TF
Sbjct: 130 SGHFDWDASWDR--VMENGLDFAHAPFVHGTTFG 161
>gi|421172490|ref|ZP_15630260.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
gi|404537756|gb|EKA47339.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
Length = 361
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 87/168 (51%), Gaps = 13/168 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A S +LKD V +P V+FR DG +++ C HRA PL G++ E
Sbjct: 29 NQWYVAALSWELKDKP-VGRTLLNKPVVLFRMGDGQVAALEDRCCHRALPLSNGTLEEAG 87
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++C YHG ++ GKC ++P K+ + E++ ++WIW G + A+ P
Sbjct: 88 VRCGYHGLLFNQAGKCVEIPGQDKIPSKAKVPAYHVRERDQIVWIWFGAD--AASEPDCE 145
Query: 334 PPSGFEIHA--EIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFA 374
PP+ +E+H+ + V + + H L+ DNL+DL+H + H T
Sbjct: 146 PPA-YEVHSSGKYVFDGSVYHYDAPYQLIHDNLMDLSHLGYVHLKTIG 192
>gi|298158512|gb|EFH99579.1| Probable vanillate O-demethylase oxygenase subunit oxidoreductase
protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 325
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 130/331 (39%), Gaps = 51/331 (15%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 302
V +R ++ +++ C HR PL LG V G++ C YHG DGK MP ++R
Sbjct: 2 VFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQLVCGYHGLVMGGDGKTAAMPGQRVRGF 61
Query: 303 KI-KSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLL 356
K+ E+ G IW+WPGD P L+ + + E + + ++ L++
Sbjct: 62 PCNKTFAAVERYGFIWVWPGDREKAD--PALIHHLEWAVSDEWAYGGGLFHIQCDYRLMI 119
Query: 357 DNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPASGLQG----------------YW---- 396
DNL+DL H + H S+ + + P + ++G +W
Sbjct: 120 DNLMDLTHETYVHASSIGQ-----KEIDEAAPVTTVEGEEVITARHMENIMPPPFWQMAL 174
Query: 397 ------DPYPIDM----EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSR 446
D P+D F PP VL +G++ GK + + P +
Sbjct: 175 RGNNLADDVPVDRWQICRFTPPSHVLIEVGVAHAGKGGYHAPHEFKASSIVVDFITPETD 234
Query: 447 KKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPV 506
+ M+ +F + + R ++ +EDL ++ QQ+ + L +
Sbjct: 235 TSIWYFWGMARNFNPADEQ---LTATIREGQRKIFSEDLEMLERQQQNLLQHPQRNLLKL 291
Query: 507 GYDKLGVRYRLWRDAL-----EKGAKQLPFM 532
D GV+ R + L A+Q+P M
Sbjct: 292 NIDAGGVQSRKILERLIAAERASTAEQIPVM 322
>gi|333908973|ref|YP_004482559.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333478979|gb|AEF55640.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 364
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 132/336 (39%), Gaps = 36/336 (10%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T KN W+ A S ++ + E +R D V + C HR L +G V
Sbjct: 5 TYPKNAWYVAAMSEEVAGSKPLGRKICGESIAFYRSHDDQIAAVLDFCPHRGAALSIGYV 64
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGDEPPT--AT 328
+G + C YHG + DGK + MP +++ +KS E+ G IW+WPG++ A
Sbjct: 65 EDGLLVCGYHGLKMGADGKTKSMPLQRVQGFPCMKSYAVEERYGFIWVWPGEQSKADRAL 124
Query: 329 IPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK--- 384
IP L E + + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 125 IPHLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKEIDESPVDTKV 184
Query: 385 ------------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
F A G D +D F PP V+ +G++ G
Sbjct: 185 DGDKVITSRFMENIMPPPFWQAALRGNGLADDVAVDRWQICRFSPPSHVMIDVGVAHAGH 244
Query: 423 --LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
E N + ++ + + P S + M+ +F K + R +
Sbjct: 245 GGFEASNDHKASSTV--VDFITPESDTSIWYFWGMARNFNPEDKA---LTDNIREGQGAI 299
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
EDL ++ QQE + + L + D GV+ R
Sbjct: 300 FAEDLEVLERQQENLLAFPDYDLLKLDIDAGGVQSR 335
>gi|254418839|ref|ZP_05032563.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
gi|196185016|gb|EDX79992.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
Length = 376
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 21/182 (11%)
Query: 207 VQPYNTR-LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACP 265
QP+ + + W+ VA S D+ + ++ EP +I R + G +++ C HRA P
Sbjct: 23 AQPFGKGFVADAWYFVALSRDVAPAGLKRYEIMGEPVLIGRTRAGAVYAMRDICPHRAAP 82
Query: 266 LHLGSV----NEGR-IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEG 314
L G + EG I+CPYHGW + DG C +PS + +K+++ P E +G
Sbjct: 83 LSAGKLVEKPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRAFPVRESQG 142
Query: 315 MIWIWPGDEPPTATIPCLLPP-------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 367
M+++W + P PP SG ++ + + I+H ++ L+D AH P+
Sbjct: 143 MVFVWMASDARNPMEPDHEPPVFPGVVGSGPKLVEAMEFDSHIDHAVV--GLMDPAHGPY 200
Query: 368 TH 369
H
Sbjct: 201 VH 202
>gi|388547303|ref|ZP_10150569.1| oxidoreductase subunit alpha [Pseudomonas sp. M47T1]
gi|388274547|gb|EIK94143.1| oxidoreductase subunit alpha [Pseudomonas sp. M47T1]
Length = 352
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 133/338 (39%), Gaps = 47/338 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ + + C E+ V +RG G V++ C HR PL LG V G
Sbjct: 4 KNTWYVACTPDEIAEKPLGRQICGEKI-VFYRGPHGRVAAVEDFCPHRGAPLSLGYVESG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG DGK +MP ++R K+ E+ G IW+WPG++ P L+
Sbjct: 63 NLVCGYHGLVMGCDGKTVEMPGQRVRGFPCNKTYAVEERYGFIWVWPGEQ--KIADPELI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
+ + E + + ++ L++DNL+DL H + H ++ + + P
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIGCDYRLMIDNLMDLTHETYVHATSIGQ-----KEIDEAAP 175
Query: 389 ASGLQG----------------YW----------DPYPID----MEFRPPCMVLSTIGIS 418
+ +Q +W D P+D F PP VL +G++
Sbjct: 176 ITRVQDDEVITARHMENIMAPPFWRMALRGNNLADDVPVDRWQICRFSPPSHVLIEVGVA 235
Query: 419 KPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAE 478
GK Q + P + + M+ +F H + R
Sbjct: 236 HAGKGGYNAAPQYKAASIVVDFITPETDTSIWYFWGMARNFNP---HDETLTASIREGQG 292
Query: 479 QVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ +EDL ++ QQ+ + L + D GV+ R
Sbjct: 293 KIFSEDLTMLEQQQKNLLANPERNLLKLNIDAGGVQSR 330
>gi|428300003|ref|YP_007138309.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 6303]
gi|428236547|gb|AFZ02337.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 6303]
Length = 340
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ FW+PV L + F + V++ G P V++ C HR+ L LG V
Sbjct: 9 FRRFWYPVVPINLLSKSSPHAFTLLNQKIVLWLDSQGNPAAVKDRCCHRSAQLSLGKVVN 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
G I CPYHGW +++ G C +P N ++ S C E+ G W+ D P I
Sbjct: 69 GDIVCPYHGWNFNSTGTCTHVPQLNNGMIPSNYQVTSYACVERYGYAWVCLED--PLCDI 126
Query: 330 PCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P + FE IH E +++N D AH F HT+TF
Sbjct: 127 PNIPEARNFEYRLIH-EFYEPWNCAGLRVMENEFDTAHPTFVHTTTFGN 174
>gi|86749388|ref|YP_485884.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86572416|gb|ABD06973.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 452
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W PVA +L+ + + P E +V+F+ + G G + C HR
Sbjct: 14 GPATPCGKLMRAYWQPVALVDELEGERPIKPVRLLGEDFVLFKDETGRYGLMDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DGKC + P S +N+K ++ P + GM+W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCLETPAEPGNSVLCQNIKQRAFPVVAKGGMLWT 133
Query: 319 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ G EPP I C + P + + E L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFVAPDSHVFAFKGLFECNWLQALEVG--IDPAHASFLH 184
>gi|449061481|ref|ZP_21738899.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
hvKP1]
gi|448873003|gb|EMB08127.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
hvKP1]
Length = 345
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADSDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|319782309|ref|YP_004141785.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168197|gb|ADV11735.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 346
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ ++ D +VP E V++R DG+ +++ C HR PL +G +
Sbjct: 3 LRNCWYVAAWDHEVAD-RLVPTRILGEDIVLYRRTDGVVAALEDACPHRKLPLSMGRIKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ-LRNVK-IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG + + G C ++P + + +V ++S P E+ G++WIW G+ P
Sbjct: 62 DTVECGYHGLTFDSTGTCTRVPGAEKIPHVACVRSYPIAERYGLLWIWMGEA--AKADPA 119
Query: 332 LL------PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L+ + ++ M L + + DNLLD +H + H S+F
Sbjct: 120 LIFAVDHWGDPAWGVNRGESMALDCNYLYMTDNLLDPSHVSWVHQSSFG 168
>gi|428305773|ref|YP_007142598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428247308|gb|AFZ13088.1| Rieske (2Fe-2S) iron-sulfur domain protein [Crinalium epipsammum
PCC 9333]
Length = 340
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ ++FW+ VA ST+LK + ++ E IFRG DG +++ C HR L G V
Sbjct: 2 KFEDFWYVVALSTELKPNKVLSCTVLGEWLAIFRGDDGKSVALRDRCMHRNSRLSRGKVC 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+G +QCPYHGW Y +GK +P+ L + + K EQ+G +++ D+P
Sbjct: 62 QGNLQCPYHGWVYDKNGKVVAVPAEGDNFKMLDSRQAKLYQTKEQDGYVYVRLTDQPSEE 121
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD---NLLDLAHAPFTHTSTF 373
P +P G E E V + H + + N +D+ H H F
Sbjct: 122 FEPFKMPYYG-EPGWETVRVINRFHNNVTNCAENFIDIPHTASVHPGVF 169
>gi|429333553|ref|ZP_19214247.1| vanillate monooxygenase [Pseudomonas putida CSV86]
gi|428761753|gb|EKX83973.1| vanillate monooxygenase [Pseudomonas putida CSV86]
Length = 358
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ F+ +LKD V +P V+FR DG P +++ C HRA PL G++ E
Sbjct: 25 NQWYVAGFAWELKDKP-VGRTLLGKPVVLFRTADGQPAALEDRCCHRALPLSHGTLEEQG 83
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF---EQEGMIWIW--------PGDEP 324
++C YHG ++ G+C ++P K K +P + E++ ++WIW P EP
Sbjct: 84 VRCGYHGLLFNGAGQCLEVPGQAKVPTKAK-VPAYHVRERDQILWIWFGSADHKEPTYEP 142
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
PT I SG ++ V + L+ DNLLDL+H + H T
Sbjct: 143 PTYDIHS----SGEYLYEGDVYHYDAPYQLIHDNLLDLSHLGYVHLRTIG 188
>gi|307725646|ref|YP_003908859.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586171|gb|ADN59568.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 356
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 10/179 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A S+++ + +EP V++R G + + C HR PL G + +
Sbjct: 4 LLNAWYVAALSSEVTAHAPLGRTLLDEPVVLYRTAGGEAVALADRCPHRFAPLSSGRIVD 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
G ++CPYHG + G C P R + + P E+ G +W WPGD P +
Sbjct: 64 GTLECPYHGLRFGAHGHCVFNPHGDGRVPARAQARRYPVHERYGAVWFWPGD--PQRALG 121
Query: 331 CLLPPSGF-----EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
LP + +E + + L DNLLDL+H + H T +V+
Sbjct: 122 TPLPAFDYLDPRDHFTSERYLHTRANYQLSADNLLDLSHFQYLHPDTLGSEQMASGVVR 180
>gi|381162433|ref|ZP_09871663.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
gi|418460036|ref|ZP_13031143.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|359739937|gb|EHK88790.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|379254338|gb|EHY88264.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
Length = 377
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 125/325 (38%), Gaps = 59/325 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ A+ ++ + P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDHEVTTKKPLARTIAGVPLALWRNSEGRAVALADACWHRLAPLSKGKILGD 85
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD P P
Sbjct: 86 ELQCPYHGLRYNATGRCTAMPAQETINPSAMVPSYPVVERYRYVWVWVGD--PDLADPDT 143
Query: 333 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 375
+P G IHA+ + L+LDNL+DL H F H S+ +
Sbjct: 144 VPDMHQMDDPGWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHASSIGQEELSEA 197
Query: 376 ---------GWSVPSLVKFLTPA-----------SGLQGYWDPYPIDMEFRPPCMVLSTI 415
+V ++ + P G +G D + I + F P + +
Sbjct: 198 EFDVVHEGNTVTVTRWMRDIDPPPFWLKNMRDKFPGFEGKVDRWQI-ITFEAPSTICIDV 256
Query: 416 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQY 471
G++K G + R + + ++ P + + + LD ++ +
Sbjct: 257 GVAKAGTGAPEGDRSQGVNGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQL----- 311
Query: 472 LWRHFAEQVLNEDLRLVLGQQERMN 496
R V ED ++ QQ+ ++
Sbjct: 312 --RQSVHGVFAEDEDMLRAQQDAID 334
>gi|254512627|ref|ZP_05124693.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
gi|221532626|gb|EEE35621.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
Length = 349
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 18/173 (10%)
Query: 214 LKNFWFPVAFSTD----LKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG 269
L+N W+ A+S D LK +T + +E V++R +DG P +++ C HR PL G
Sbjct: 3 LRNCWYVAAWSKDIGRALKAETFL-----DENIVLYRQEDGTPVALEDACPHRKLPLSKG 57
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPT 326
++ ++C YHG + GKC P+ + R ++S P ++ ++WIW GD P
Sbjct: 58 NLKGDLVECGYHGLTFDCSGKCIDSPTQRGMTPRRAVVRSYPVVDRYRLLWIWMGD-PEL 116
Query: 327 ATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
A + P F+ + M++ + + DNLLD +H + H S+FA
Sbjct: 117 ADPDKIFPIENFDNPGWGLTDGGAMDIDCHYLWVCDNLLDPSHVAWVHVSSFA 169
>gi|333907699|ref|YP_004481285.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333477705|gb|AEF54366.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 344
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ +S DL D + EP VI+RG+DG +++ C HR PL G V
Sbjct: 4 LRNTWYCAGWSQDLLDKPLA-ITLLNEPVVIYRGEDGTAIALEDRCPHRFAPLSKGKVQG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEP---PTA 327
I C YHG + G P + +K P E +G+IWIW G+ P +
Sbjct: 63 NNIACGYHGLVFDAKGNGTYNPHGNGAIPKGCSVKYYPVIEAQGVIWIWMGEASQADPAS 122
Query: 328 TI---PCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
I C +H + ++ E L+ DNLLDL+H P+ H+
Sbjct: 123 IIDIGECDKREGWTSVHGYLNVKCHYE--LVADNLLDLSHVPYLHS 166
>gi|264677972|ref|YP_003277879.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262208485|gb|ACY32583.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 354
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 78/166 (46%), Gaps = 9/166 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A S++L D V E V+FR DG +++ C HRA PL G+V
Sbjct: 23 NQWYVAAHSSELADKP-VGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCG 81
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQE--GMIWIWPGDEPPTATIPCLL 333
++C YHG Y+ +GKC ++P + K K L QE G+IWIW G +P C
Sbjct: 82 LRCGYHGLLYNHEGKCVEIPGQEKIPSKAKVLAYHVQERDGLIWIWFG-KPENPEPMCDA 140
Query: 334 PPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFA 374
P E V + H L+ DNLLDL+H + H T
Sbjct: 141 PSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHTIG 186
>gi|365141332|ref|ZP_09347136.1| hypothetical protein HMPREF1024_03167 [Klebsiella sp. 4_1_44FAA]
gi|419974429|ref|ZP_14489848.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|419979949|ref|ZP_14495237.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|419985376|ref|ZP_14500517.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|419991036|ref|ZP_14506004.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|419997165|ref|ZP_14511963.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|420003374|ref|ZP_14518020.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|420009022|ref|ZP_14523508.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|420015354|ref|ZP_14529655.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|420020652|ref|ZP_14534838.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|420026028|ref|ZP_14540033.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420032105|ref|ZP_14545922.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420037639|ref|ZP_14551292.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420043536|ref|ZP_14557023.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420049252|ref|ZP_14562561.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420054838|ref|ZP_14568009.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420061104|ref|ZP_14574096.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420066770|ref|ZP_14579568.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420071265|ref|ZP_14583912.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420077309|ref|ZP_14589775.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420081737|ref|ZP_14594042.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421912736|ref|ZP_16342447.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421913900|ref|ZP_16343562.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|425081472|ref|ZP_18484569.1| hypothetical protein HMPREF1306_02220 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425091489|ref|ZP_18494574.1| hypothetical protein HMPREF1308_01749 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428149802|ref|ZP_18997614.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428932476|ref|ZP_19006053.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
JHCK1]
gi|428940702|ref|ZP_19013776.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
VA360]
gi|194399727|gb|ACF60811.1| HpxD [Klebsiella pneumoniae]
gi|363652905|gb|EHL91907.1| hypothetical protein HMPREF1024_03167 [Klebsiella sp. 4_1_44FAA]
gi|397345856|gb|EJJ38976.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH1]
gi|397347459|gb|EJJ40566.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH2]
gi|397351770|gb|EJJ44852.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH4]
gi|397363434|gb|EJJ56074.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH6]
gi|397364959|gb|EJJ57586.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH5]
gi|397369742|gb|EJJ62341.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH7]
gi|397376596|gb|EJJ68849.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH9]
gi|397382477|gb|EJJ74638.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH8]
gi|397387647|gb|EJJ79662.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH10]
gi|397396089|gb|EJJ87784.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397398428|gb|EJJ90091.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397405204|gb|EJJ96675.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397413644|gb|EJK04856.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397413832|gb|EJK05038.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397422433|gb|EJK13402.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397429250|gb|EJK19969.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397431598|gb|EJK22270.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397440589|gb|EJK30991.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397446191|gb|EJK36414.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397452878|gb|EJK42943.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|405602902|gb|EKB76025.1| hypothetical protein HMPREF1306_02220 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405612548|gb|EKB85299.1| hypothetical protein HMPREF1308_01749 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410113356|emb|CCM85072.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410123734|emb|CCM86187.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426301783|gb|EKV64010.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
VA360]
gi|426307088|gb|EKV69177.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
JHCK1]
gi|427540228|emb|CCM93752.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 345
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|411118586|ref|ZP_11390967.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410712310|gb|EKQ69816.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 340
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK FW+P+ + L + PF+ I+ DG P V + C HR+ L G +
Sbjct: 9 LKRFWYPIVPLSALSFEIPYPFELLGHKLAIWLDADGQPAAVSDRCCHRSAQLSKGVIIN 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDEP--PT 326
G ++CPYHGW Y+ G C +P T + K+ S C ++ G +W+ ++P P
Sbjct: 69 GCLRCPYHGWSYNRAGACVNVPQFEPDQTIPSSYKVSSYLCSKRYGYVWVCLAEDPLLPI 128
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
TIP P+ IH + +++N D +H F H ++F
Sbjct: 129 PTIPEANDPAMRLIH-QFYERWNCSGLRVMENSFDNSHFSFVHAASFG 175
>gi|330006269|ref|ZP_08305574.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|328535920|gb|EGF62345.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
Length = 345
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDITG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|239503460|ref|ZP_04662770.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
AB900]
gi|421679138|ref|ZP_16119017.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC111]
gi|410391630|gb|EKP43997.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
OIFC111]
Length = 358
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +RGK+ V++ C HR PL LG V
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRGKENQVAAVEDFCPHRGAPLSLGYVEY 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVLMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|148555200|ref|YP_001262782.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500390|gb|ABQ68644.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 367
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+S ++ D+ ++ E +++R + G NTC HR PLHLG V
Sbjct: 4 LRNAWYVAAWSDEVSDN-LLTRRILNEQVLLYRTEAGELVATANTCPHRFAPLHLGKVVG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGD--EPPTAT 328
I+CPYHG ++ +G+C P R ++++ P E+ G WIW GD A
Sbjct: 63 DAIECPYHGLRFNGEGRCVFNPDGDGRIPAGARLRTYPITERLGAAWIWMGDPARADLAM 122
Query: 329 IP---CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
IP L PS + V+ + + + DNL+D AH H ++ A
Sbjct: 123 IPDFEFLEDPSYRTVKG--VLHVRANYRYINDNLMDEAHLHMVHHNSLA 169
>gi|410686729|ref|YP_006963032.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|388482580|gb|AFK33102.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|403398307|gb|AFR43891.1| putative vanillate O-demethylase oxygenase chain A [uncultured
bacterium]
Length = 358
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KNFW+ A ++ ++ E+P V FR +G + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRQ-LLARTLLEQPVVFFRRNEGSVAALADRCSHRRVSLSLGRLIGD 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+QC YHG ++ DG C +P Q R + ++S P E++G +WIWPGD P
Sbjct: 63 EVQCGYHGLTFAGDGSCTSIPG-QSRVPPSACVRSYPVVERDGFVWIWPGD--PALANET 119
Query: 332 LLPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 372
L+P + + P E L+ ++N+LDL+H + H T
Sbjct: 120 LVPDYAEICSSGRYVGRPAEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|206575963|ref|YP_002238543.1| Rieske 2Fe-2S domain-containing protein [Klebsiella pneumoniae 342]
gi|288935529|ref|YP_003439588.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Klebsiella
variicola At-22]
gi|290509567|ref|ZP_06548938.1| vanillate monooxygenase [Klebsiella sp. 1_1_55]
gi|378978754|ref|YP_005226895.1| Rieske (2Fe-2S) domain-containing protein [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419763175|ref|ZP_14289419.1| Rieske (2Fe-2S) iron-sulfur domain protein [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
gi|206565021|gb|ACI06797.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae 342]
gi|288890238|gb|ADC58556.1| Rieske (2Fe-2S) iron-sulphur domain protein [Klebsiella variicola
At-22]
gi|289778961|gb|EFD86958.1| vanillate monooxygenase [Klebsiella sp. 1_1_55]
gi|364518165|gb|AEW61293.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397743860|gb|EJK91074.1| Rieske (2Fe-2S) iron-sulfur domain protein [Klebsiella pneumoniae
subsp. pneumoniae DSM 30104]
Length = 345
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDITG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|238894701|ref|YP_002919435.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402780814|ref|YP_006636360.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|238547017|dbj|BAH63368.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|402541717|gb|AFQ65866.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae 1084]
Length = 345
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|213385123|dbj|BAG84251.1| putative oxygenase [Streptomyces griseoviridis]
Length = 442
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ N W+PVA S D+K + E V++R G + C H+ L G +N+
Sbjct: 2 IPNQWYPVARSRDVKQNKPKGAMRLGEEVVMWRDARGNAVVQEARCPHKGANLGAGRINQ 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMP--STQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
++CPYHG+ + G CE +P ++ R ++I++ P E+ M+W+W G+E +
Sbjct: 62 NALECPYHGFRFGAGGDCEAVPCLGSEARIPKGLRIRNYPVREEHDMVWMWWGEE--RES 119
Query: 329 IPCL-LPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P + +PP +H + P+ + ++++L+ HAPF H ++
Sbjct: 120 YPEIDIPPEVTRWKGVHVTGSWQQPVHYTRYIESMLEFYHAPFVHRGSW 168
>gi|365887916|ref|ZP_09426728.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3809]
gi|365336458|emb|CCD99259.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3809]
Length = 452
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L + V +V+F+ G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGGDFVLFKDAQGRYGLLDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 318
L G + +G ++C +HGW + DG C + P+ + +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEQGGLRCSFHGWLFDVDGACLETPAEPVGSPLCKNVKQRSYPVVEKGGILWA 133
Query: 319 WPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
W GD P A + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGDGAPPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|188989719|ref|YP_001901729.1| oxygenase subunit [Xanthomonas campestris pv. campestris str. B100]
gi|167731479|emb|CAP49654.1| oxygenase subunit [Xanthomonas campestris pv. campestris]
Length = 350
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKAMLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
S + + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 SADGAGVVCAYHGLRFGSGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSAAEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|386034793|ref|YP_005954706.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
KCTC 2242]
gi|424830593|ref|ZP_18255321.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339761921|gb|AEJ98141.1| vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
KCTC 2242]
gi|414708021|emb|CCN29725.1| Rieske 2Fe-2S domain protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 345
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSRPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ +E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPALEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 TPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|260549936|ref|ZP_05824151.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|424056286|ref|ZP_17793807.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425741333|ref|ZP_18859483.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
gi|260406928|gb|EEX00406.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp.
RUH2624]
gi|407441326|gb|EKF47832.1| vanillate O-demethylase oxygenase subunit [Acinetobacter
nosocomialis Ab22222]
gi|425492639|gb|EKU58893.1| vanillate O-demethylase oxygenase subunit [Acinetobacter baumannii
WC-487]
Length = 358
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ +++D + C E+ V +R K+ V++ C HR PL LG V +
Sbjct: 3 IKNAWYVACRPEEIQDKPLGRTICGEKI-VFYRAKENQVAAVEDFCPHRGAPLSLGYVED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCL 332
G + C YHG DGK MP+ ++ K+ E+ G IW+WPG++
Sbjct: 62 GNLVCGYHGLVMGCDGKTVSMPAQRVNGFPCNKAYAVVEKFGFIWVWPGEK--ALADEAK 119
Query: 333 LPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + H E + + ++ L++DNL+DL H + H+S+ +
Sbjct: 120 LPTLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQ 167
>gi|383780897|ref|YP_005465463.1| hypothetical protein AMIS_57270 [Actinoplanes missouriensis 431]
gi|381374129|dbj|BAL90947.1| hypothetical protein AMIS_57270 [Actinoplanes missouriensis 431]
Length = 399
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRG-KDGIPGCVQNTCAHRACPLHLGS 270
LKNFW+ V FS + T P + V++R + G + + C HR L G
Sbjct: 2 LKNFWYAVEFSAHV---TTKPERITVLGQHLVVYRTPRQGRVVALSDLCVHRGAALSGGW 58
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPP 325
+ + +I CPYHGWEY DG C K+P+ + ++ S P E+ G +W++ GD P
Sbjct: 59 LKDDKIVCPYHGWEYEPDGACTKIPANLPGRGIPKKARVDSYPVQEKYGFVWVFMGDLPE 118
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFAK 375
+ P + P F+ E + + G +L+N D+AHAPF H F
Sbjct: 119 SERPPIPVWPE-FDDLVENGGKFRVVTGEFLWNANYERILENGCDIAHAPFVHAGRFGN 176
>gi|41407532|ref|NP_960368.1| hypothetical protein MAP1434 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395885|gb|AAS03751.1| hypothetical protein MAP_1434 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 372
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
Q TR W + D D P D F + V+FRG DG + C H L
Sbjct: 14 AQAVPTRFARGWHCLGLIRDFGDGKPHPIDAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 73
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 323
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 74 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 133
Query: 324 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 134 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 186
>gi|221202552|ref|ZP_03575581.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2M]
gi|221207751|ref|ZP_03580758.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2]
gi|221172248|gb|EEE04688.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2]
gi|221177589|gb|EEE10007.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD2M]
Length = 370
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 298
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 299 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 353
+ +++ PC E G+I+++PGD P L S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRAYKTRRFGREVKCHYS 174
Query: 354 LLLDNLLDLAHAPFTHTSTFAK 375
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|188989785|ref|YP_001901795.1| oxygenase subunit [Xanthomonas campestris pv. campestris str. B100]
gi|167731545|emb|CAP49720.1| oxygenase subunit [Xanthomonas campestris pv. campestris]
Length = 358
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 18/171 (10%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA+ +++ + P V++R G +++ C HR PL +G +
Sbjct: 11 NAWYAVAWDHEVRH-ALTPRKLCNLDVVLYRTTAGAVVALEDACWHRLVPLSMGKLRGDD 69
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG Y+ G+C MPS + N ++ P E+ +W+WPGD + A IP
Sbjct: 70 VVCGYHGLVYNAQGRCVHMPSQETINPSACVRGFPVAEKHRYVWVWPGDPAQADVALIPD 129
Query: 332 L-------LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L G IHA+ ++ L+LDNL+DL H F H S+ +
Sbjct: 130 LHWSHDPAWAGDGRTIHAK------CDYRLVLDNLMDLTHETFVHGSSIGQ 174
>gi|428310254|ref|YP_007121231.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428251866|gb|AFZ17825.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 383
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N+W+PV +++ LK ++P +++ ++R + G +++ C H+ LH G V
Sbjct: 24 NYWYPVGWASQLKPGDIMPVVIWQQAIAVYRDETGQIHALEDACPHKGIALHKGKVQGCH 83
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+ C YHGWE++ +G+C +P +L + +S P E+ +IW++PGD PT
Sbjct: 84 LTCAYHGWEFNGNGECVGIPYLPEGQKLPRAQARSYPVQEKYNLIWLFPGD--PTLAASQ 141
Query: 332 LLPPSGFEIHAEIVM-----ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
LP H + +M + + +N +D+ H F H + +GW P L
Sbjct: 142 ELPHVPEFDHPDYLMIPLAAHMQSHFSICNENAMDVFHG-FLHQNL--QGWFNPVL 194
>gi|148556315|ref|YP_001263897.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501505|gb|ABQ69759.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 345
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 11/171 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ ++ +L + + E + +R + V + C HR PLH+G +
Sbjct: 4 LRNCWYVAGWADELAEGAPLARTIAGEAILFWRDGASL-FAVADRCPHRLAPLHMGRTDG 62
Query: 274 GRIQCPYHGWEY-STDGKCEKMPSTQLRN-VKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG + G+C P + + + I++ PC E+ ++W+W GD P P
Sbjct: 63 ATVRCGYHGLAFDGVSGRCTDNPHGAITSALAIRTYPCVERHRILWVWTGD--PDRADPA 120
Query: 332 LLPPSGF------EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+P GF ++ M H LL DN+LDL+HA + H +T G
Sbjct: 121 DIPDMGFVDRAGEHAFSKGYMHTAAGHKLLEDNILDLSHADYLHPATLGGG 171
>gi|374573646|ref|ZP_09646742.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
gi|374421967|gb|EHR01500.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
Length = 353
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 112/292 (38%), Gaps = 50/292 (17%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 302
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 303 K--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 349
+++ P E+ IW+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYIWLWMGD--PALADPALVPDLHWNHDPAWAGDGKTIHVN------ 145
Query: 350 IEHGLLLDNLLDLAHAPFTHTSTFA------------------------KGWSVPSL-VK 384
++ L+LDNL+DL H F H S+ +G P K
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 385 FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPS 444
L G G D + I + F PC + +G++ G + R + L+ P
Sbjct: 206 QLGKEPGKSGLVDRWQI-IRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPE 264
Query: 445 SRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 496
+ K + ++ + + R + +ED ++ QQ M+
Sbjct: 265 TEKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 313
>gi|33861365|ref|NP_892926.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633942|emb|CAE19267.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 440
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 30/302 (9%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ + ST+LK + + F F+EP ++FR K+ C++N C HR + GS++ G +
Sbjct: 48 WYAICPSTELKKNKIHYFSLFDEPLLLFRDKNNNVRCIKNICPHRGSSFYGGSISNGELT 107
Query: 278 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 325
CPYHG +S+ G C+ + + + + E+E I+I+ D+
Sbjct: 108 CPYHGARFSSQGNCQNIDRITCSHIVDNNYDNYAKRIHLSQFKVVERESYIFIYFTDKSE 167
Query: 326 T--------ATIPCL-LPPSGFEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
T + I L +GF + E++++ + +++N LD+ H + H T
Sbjct: 168 TDLNKFNDDSLISNYDLTANGFSVKDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHGDT 227
Query: 373 F-AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
K + LV F + Y + I P I PG++
Sbjct: 228 IPDKDVNKNVLVSFNQKININPNYIE--SIYFYKNNPTKEFIRIKYIPPGRILIYKGDPA 285
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDF--ASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
A+ Q+ +P K R++ R F L ++ + + + ++ +ED ++
Sbjct: 286 ASRYVQVLDHIPLGDNKARVIVRHYRKFLKNKFLNNLILFKEIQKKIFYKIFDEDYMILK 345
Query: 490 GQ 491
Q
Sbjct: 346 TQ 347
>gi|329119536|ref|ZP_08248221.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464469|gb|EGF10769.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
bacilliformis ATCC BAA-1200]
Length = 346
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 131/337 (38%), Gaps = 19/337 (5%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
++ P QP L N+W+ A D++ F + +F G + + C HR
Sbjct: 1 MTTPEQPAADGLHNYWYITAREKDVRKKPQA-VRLFGRHYAVFHQGGGRYAALVDCCPHR 59
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWI 318
PL +G V G ++C YHGW + DG+ ++P+ +V++ ++ C Q+G +W+
Sbjct: 60 NVPLSIGKVENGCLKCAYHGWSFDGDGRLAEIPALCGCGGTPDVRVPAVHCTAQDGYVWL 119
Query: 319 WPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
G A +P CL + P++ L+N LD HA + H S F
Sbjct: 120 CIGTPATPAPLPFACLDEAGYTTFRMKTRFAAPVD--WCLENFLDCPHAVYVHNSWFRTP 177
Query: 377 WSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC----- 431
P A G Q + P + + S +S + T +
Sbjct: 178 TGKPVRALLRRNADGAQIEYANEPREKSLVWKLLQNSDTEMSHTDRFIAPATSRVDYRFS 237
Query: 432 -ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLG 490
H C P + T + +S F + P ++ +++ ++ ++ +D+ ++
Sbjct: 238 DGKHYIVTSSCTPLDKDTTEVHTVVSYKFGRL---NPLIRLVFQPLSQLIIRQDVAMMKQ 294
Query: 491 QQERMNN-GANVWNLPVGYDKLGVRYRLWRDALEKGA 526
Q++ ++ G D L WR L +G
Sbjct: 295 QRDNIDRFGGRARFCNSAADLLMPEITAWRKTLAEGG 331
>gi|168000935|ref|XP_001753171.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695870|gb|EDQ82212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 139/346 (40%), Gaps = 44/346 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE-GR 275
W+PVA DL ++ P P I+ K V + C HR PL GS++E G
Sbjct: 25 WYPVAVERDLDKNSPHPATILGRPLAIWWDKSTSKWQVYDDQCPHRLAPLSEGSISEEGH 84
Query: 276 IQCPYHGWEYSTD-GKCEKMPST--------QLRNVKIKSLPCFEQEGMIWIW------- 319
++C YHGW + D G+C +P + + + P EQ+G++W W
Sbjct: 85 LRCSYHGWTFKGDSGECTGIPQAPKDGKQRHRSKRACVSVYPSMEQQGILWFWSDLSQGP 144
Query: 320 ----PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
PP P G++I + +L + L++NL+D AH F H
Sbjct: 145 VNIEAAANPPPVFSELSDPDFGYDIS---LRDLEYSYETLIENLMDPAHVNFAHHKIQGN 201
Query: 376 GWSVPSLVKFLTPASGLQGYWDPYPIDME-FRPPCMVLSTIGISKPGKL-----EGQNTR 429
S L +T G+ +E F PP L + K N+
Sbjct: 202 RKSAEPLNFTITTKIAPSGFKGEDEKSVETFIPPVSFLLQFTLGGNNKQHIPVSHALNSE 261
Query: 430 QCAT---HLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV--PFMQYLWRHFAEQVLNED 484
+ AT + L +C+P S K+RL++ +FA+ L + P++ ++ + VL+ D
Sbjct: 262 KKATKPKKVSLLFLCIPVSPGKSRLIWSFPRNFATFLFKITPPWVLHMTNNL---VLDSD 318
Query: 485 LRLVLGQQERMN-NGANVW----NLPVGYDKLGVRYRLWRDALEKG 525
+ L+ + R+ G W +P D +R W + G
Sbjct: 319 MYLLHLLERRLQVEGPENWFKRAYIPTTADAYVAGFRRWLNDFAGG 364
>gi|365897365|ref|ZP_09435373.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3843]
gi|365421867|emb|CCE07915.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. STM 3843]
Length = 452
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L+ + V P E V+FR + G G + CAHR
Sbjct: 14 GPNDPCGKLMRQYWQPAALVDELQGERPVRPVRLLGENLVLFRDEQGRYGLIDRHCAHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + G+C P S N++ +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCSFHGWLFDVTGQCLDTPAEPKGSNLCANIRQRSYPVVEKSGIVWA 133
Query: 319 WPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ G+ P A I C P+ F+ H E +E G +D AHA + H
Sbjct: 134 YLGEGTPPAFPEIDCFTAPASHTFAFKGHMECNWLQALEVG------IDPAHASYLH 184
>gi|384429827|ref|YP_005639188.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
gi|341938931|gb|AEL09070.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. raphani 756C]
Length = 350
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
S + + C YHG + + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 SADGAGVVCAYHGLRFGSGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSAAEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|254430676|ref|ZP_05044379.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
gi|197625129|gb|EDY37688.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
Length = 464
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 142/357 (39%), Gaps = 49/357 (13%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIF-RGKDGIPGCVQNTCAHRACPLHLGSVN- 272
N W+ VA+ DL PF E+ V++ ++ C HR PL G +N
Sbjct: 4 NNQWYAVAYLDDLDRRRPTPFTLLEQDLVLWWDAAADTWRAFEDVCPHRLVPLSEGRLNG 63
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK---------SLPCFEQEGMIWIWPGDE 323
G ++CPYHGW + G+C +P + +LP +G+++++ G+
Sbjct: 64 RGELECPYHGWSFDGSGRCTAIPQADPDQAAVACSSARSRCTALPTATGQGLLFVFAGEP 123
Query: 324 PPTATIPCLLPPSGFE---IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
+P L P E + + +LP++ LL+N+LD++H PFTH T + +
Sbjct: 124 ERAPDVPLPLVPVLEEPDWLVQDTFRDLPMDALTLLENVLDVSHVPFTHHRTVGRRENAA 183
Query: 381 SLVKFLTPASGLQGY---WDPYPID-------MEFRPPCMVLSTIGISKPGKLEGQNTRQ 430
+ +T A G G+ W P F PC++ + T +
Sbjct: 184 PVEATIT-AEGPDGFTAEWLEGPRRGRLGSQFTTFAAPCLMWHDL------------TAK 230
Query: 431 CATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNEDLRLV 488
+ + P + RL R F SVL + F +H A + ED ++
Sbjct: 231 GFARILTVVYATPIRPGECRLFARFPFQFRSVLPRLLLRFRPRWLQHLANHTVLEDDQVF 290
Query: 489 LGQQERM---NNGANVWN----LPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
L QER G+ ++ LP G D W D+ G + P +P+ R
Sbjct: 291 LHWQERALARRGGSAAFSQACFLPTGSDVYVKALHAWVDS--HGGEPFP-GRPLPER 344
>gi|383452297|ref|YP_005366286.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380732272|gb|AFE08274.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 382
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 37/203 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LK+FW+ ST+L + V F V+FRG DG P +++ C HR L G V +
Sbjct: 20 LKDFWYVACLSTELPANKPVARTVFGTGLVLFRGPDGAPTALRDRCLHRNARLSQGDVFD 79
Query: 274 GRIQCPYHGWEYSTDG------------KCEKMPSTQLRNVKIKSLPC----------FE 311
GR+ CPYHGW Y G + EK+ + + +K PC E
Sbjct: 80 GRLGCPYHGWVYDVSGAVVEIPALGPPQRGEKLDAHACTHEGLKPAPCDVGRLARFPTRE 139
Query: 312 QEGMIWIWPGDEPPTATI-PCLLPPSGFEIHAEIVMELPIEHGL--LLDNLLDLAHAPFT 368
Q+G+++++ G + A P +P G M +G+ L++N +D+ H F
Sbjct: 140 QDGLVYVYLGKDVTQARAEPFRVPYWGERGWTVYFMVTRFANGVTNLVENFMDVPHTSFV 199
Query: 369 HTSTFAKGW-------SVPSLVK 384
H +GW VPS VK
Sbjct: 200 H-----RGWFRNPTRKRVPSTVK 217
>gi|221215699|ref|ZP_03588660.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD1]
gi|221164401|gb|EED96886.1| dioxygenase, iron-sulfur subunit [Burkholderia multivorans CGD1]
Length = 370
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPASGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 298
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 299 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEH 352
+ +++ PC E G+I+++PGD P + S G++ E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPVLASADDRGYKTR-RFGREVKCHY 173
Query: 353 GLLLDNLLDLAHAPFTHTSTFAK 375
+ +NL+D+ H F H +
Sbjct: 174 SFMHENLMDMNHQ-FLHRKQMGQ 195
>gi|21229775|ref|NP_635692.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66766652|ref|YP_241414.1| vanillate O-demethylase oxygenase [Xanthomonas campestris pv.
campestris str. 8004]
gi|21111267|gb|AAM39616.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gi|66571984|gb|AAY47394.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. campestris str. 8004]
Length = 350
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKAMLLDEPLVLYRLGAELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
S + + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 SADGAGVVCAYHGLRFGAGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSAAEVQIPPMPGWDEDGFQQIVCPGFDIAGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPGFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ KTRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|416952092|ref|ZP_11935501.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523128|gb|EGD01529.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 349
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ + D+ + P E V++R DG P +++ C HR PL +G +
Sbjct: 3 LRNAWYVAGWDKDVTR-ALTPVTMLGERIVLYRKADGTPVALEDACPHRMLPLSMGRLTG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEP---PTA- 327
++C YHG + G C + P + ++ P E+ G++W+W GDE P A
Sbjct: 62 DDVECGYHGLTFDCSGACVRAPGSARIPAQAVVRRYPVAERYGLVWVWMGDEAAADPDAL 121
Query: 328 -TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
TI P+ + ++ M + + + DNLLD +H + H S+F +K
Sbjct: 122 LTIDEWDDPA-WGLNRGDAMTVDCHYLYMTDNLLDPSHVAWVHRSSFGNAACESEPLKTS 180
Query: 387 TPASGL 392
A+G+
Sbjct: 181 AAANGV 186
>gi|440777042|ref|ZP_20955861.1| hypothetical protein D522_09467 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|436722755|gb|ELP46670.1| hypothetical protein D522_09467 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 370
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
Q TR W + D D P D F + V+FRG DG + C H L
Sbjct: 12 AQAVPTRFARGWHCLGLIRDFGDGKPHPIDAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 71
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 323
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 72 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 131
Query: 324 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 132 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 184
>gi|351731557|ref|ZP_08949248.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax radicis N35]
Length = 351
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +R + + C HR PL LGSV +G
Sbjct: 4 KNTWYVACTPDEIADKPLGRTICGEK-MVFYRPAPDQVAALDDFCPHRGAPLSLGSVCDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGDEP---PTATIP 330
+QC YHG GK MP +++ K +S P E+ G IW+WPGD PT
Sbjct: 63 HLQCGYHGLRVECTGKSVSMPGQRVQGFPKTRSFPAVERYGFIWVWPGDAAQADPTKIHH 122
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
+ + + + ++ L++DNL+DL H + H
Sbjct: 123 LHWADNPEWAYGGGLYHIACDYRLMVDNLMDLTHETYVHSTSIGQKEIDEVPCKTRVEGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 421
TS F +G P K +GL D +D F PP VL +G++ G
Sbjct: 183 EVITSRFMEGIEAPPFWKMALRMNGLP---DDQLVDRWQICHFTPPSHVLIEVGVALAG 238
>gi|148556311|ref|YP_001263893.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501501|gb|ABQ69755.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A+S ++ + + F++P + +R + G + N C HR PL+ G +
Sbjct: 4 LLNRWYAAAWSGEVAREPFMRV-LFDKPVLFYRTESGDVTALSNVCPHRFAPLNRGKLFG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I+CPYHG + DG+C + P + ++ E G+IWIW G P AT
Sbjct: 63 DAIRCPYHGLRFGPDGRCVQNPIGKGLLPAKAQLTRYATIEAHGVIWIWHGPAPADAT-- 120
Query: 331 CLLPPSGFEIH-----AEIVMELPIEHGLLLDNLLDLAHAPFTH 369
L+P + H + + + + L+ DNLLDL+HA F H
Sbjct: 121 KLVPFDFLDEHDRYDFVDGYIAIDANYALVSDNLLDLSHAEFLH 164
>gi|427418552|ref|ZP_18908735.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425761265|gb|EKV02118.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 346
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ ++FW+ VA ST LK T++ +E VIFRG++G P +++ C HR L G V+
Sbjct: 10 QFEDFWYVVALSTQLKPKTVLQRTVLDEWLVIFRGENGQPVALRDRCLHRNTRLSGGKVH 69
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWI--WPGDEPP 325
+G++QCPYHGW+Y++ G+ +P+ N K+ EQ+G +++ G E
Sbjct: 70 KGQLQCPYHGWQYASTGQVTNVPAEGEQFATTSNRCAKAYDTCEQDGYVYVRLRGGLETQ 129
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
+P P G+E ++ +N +D+ H H F
Sbjct: 130 PFAMPHFQAP-GWET-VRVINRFANNVTNCAENFIDIPHTVSVHPGIF 175
>gi|432333907|ref|ZP_19585642.1| vanillate monooxygenase oxygenase subunit [Rhodococcus
wratislaviensis IFP 2016]
gi|430779174|gb|ELB94362.1| vanillate monooxygenase oxygenase subunit [Rhodococcus
wratislaviensis IFP 2016]
Length = 393
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 38 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 96
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 97 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIADPQNP 156
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 157 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 216
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 217 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 275
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 276 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 320
>gi|162147961|ref|YP_001602422.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542578|ref|YP_002274807.1| Rieske (2Fe-2S) domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786538|emb|CAP56120.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530255|gb|ACI50192.1| Rieske (2Fe-2S) domain protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 360
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 12/168 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA+S +LK + +P + R +G +++ CAHR PL G V
Sbjct: 29 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPAEGEVFALEDRCAHRQVPLSKGVVKGQA 88
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ PC EQ+G+I+++PGD A P
Sbjct: 89 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREQDGLIFVFPGDPERAAATP-- 145
Query: 333 LPPSGFEIHAE-----IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
LP + + + + + +NL+D+ H F H +
Sbjct: 146 LPRLAQTTNPDYKTRRFGRHVKCHYSFMHENLMDMNHQ-FMHMKQMGQ 192
>gi|419960669|ref|ZP_14476684.1| vanillate monooxygenase oxygenase subunit [Rhodococcus opacus M213]
gi|414573890|gb|EKT84568.1| vanillate monooxygenase oxygenase subunit [Rhodococcus opacus M213]
Length = 357
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIADPQNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|113477070|ref|YP_723131.1| Rieske (2Fe-2S) protein [Trichodesmium erythraeum IMS101]
gi|110168118|gb|ABG52658.1| Rieske (2Fe-2S) region [Trichodesmium erythraeum IMS101]
Length = 349
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ VA S +L+ + + + V++RG G +++ C HR L G V
Sbjct: 19 QNHWYAVARSIELQSQPL-SITLWHQTIVLYRGCSGKVYGLEDICPHRFVKLSSGRVIAD 77
Query: 275 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHGW + ++GKC +P + +L + +I++ P E G IW++PGD+ I
Sbjct: 78 ELECTYHGWRFESNGKCSHIPYLASNQKLPSCQIRTFPVQELHGFIWLFPGDKSLANLIS 137
Query: 331 CLLPPSGFEIH--AEI-VMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
L P ++ A I V++ + L++NL+D+ H H + W+ L+
Sbjct: 138 PLEIPEWDHLNYIATISVIKCRAHYSYLVENLMDMYHG---HLHQNWQAWAAAKLIDLSE 194
Query: 388 PASGLQGYWDP---YPID 402
+ Y++ Y ID
Sbjct: 195 NDHRVDAYYEAQSYYKID 212
>gi|345855381|ref|ZP_08808110.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
zinciresistens K42]
gi|345633153|gb|EGX54931.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
zinciresistens K42]
Length = 397
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA S ++ +V E ++RG G +++ CAHR PL +G V
Sbjct: 35 DFWYPVARSRTVRRGKVVATAFAGERIALYRGTGGTVHALEDRCAHRQVPLSMGVVEGET 94
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YH W Y DG+ ++P + + ++ P E G+++++PGD P A +
Sbjct: 95 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRGYPVREAYGLVFVFPGD-PELAAVTA 153
Query: 332 L--LPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLT 387
L LP G + + + + L +NLLD+ H F H K P L+ + T
Sbjct: 154 LPVLPAFGSPAYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVLGK--LRPELLGYRT 210
Query: 388 PASGLQGYW 396
A ++ +
Sbjct: 211 TARSVEARY 219
>gi|336250321|ref|YP_004594031.1| (hypo)xanthine hydroxylase [Enterobacter aerogenes KCTC 2190]
gi|334736377|gb|AEG98752.1| (hypo)xanthine hydroxylase [Enterobacter aerogenes KCTC 2190]
Length = 345
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 127/304 (41%), Gaps = 41/304 (13%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA S D+ V +E VI+R + + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARSADIGPQP-VKATLLDEKLVIYRLHERV-VVARDVCPHRGVPLTLGFHD 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEPP 325
E I CPYHG + DG+C ++PS+ + + K +L C+ E G++W+ + D PP
Sbjct: 79 EEGIICPYHGLRFGEDGRCNRIPSSPNQPIPAKLNLTCYAAEEHYGLVWVCLDYDADNPP 138
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLV 383
GF+ E+ G ++ LD+AH + HT TF A+ VP +
Sbjct: 139 RLPTMPHWADDGFQQLTCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADAENQQVPDYL 198
Query: 384 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 428
T + YW YP +R P +T+ I PG+
Sbjct: 199 PEETENGFVVDYWSTVGNYPASAGYRAPEGFQWLRRFEMHLPFTATLTIHFPGE------ 252
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEVY--AFNLRVFEEDRLMV 303
Query: 489 LGQQ 492
Q+
Sbjct: 304 ESQR 307
>gi|123968405|ref|YP_001009263.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. AS9601]
gi|123198515|gb|ABM70156.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. AS9601]
Length = 440
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 127/309 (41%), Gaps = 30/309 (9%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ + S +LK++ + F F+EP V++R ++ C++N C HR GS+++G I
Sbjct: 48 WYAICPSKELKNNKLYYFSLFDEPLVLYRDENENVRCIKNICPHRGASFFEGSLSDGVIT 107
Query: 278 CPYHGWEYSTDGKCEKMP------------STQLRNVKIKSLPCFEQEGMIWIWPGDEPP 325
CPYHG ++S+ G C+ + + + + E+ G I++ +
Sbjct: 108 CPYHGAKFSSGGSCQNLDRITCKHIVDNNYDNYAKRIHLSQYKALEKNGYIFVHFSKKSD 167
Query: 326 T--ATIPCLLPPSGFEIH-----------AEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
T + I +P S +E++ E++++ + +++N LD+ H + H T
Sbjct: 168 TDLSNISEDVPISNYELYENGFLHKDYVFEEVLVDFKCDWSRIIENHLDILHLFWVHGDT 227
Query: 373 F-AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
K + LV F + Y + I P I PG++
Sbjct: 228 IPDKDVNKNVLVSFNQKINVTHKYIE--SIYYYKNEPTKEFIRIKYIPPGRILIYKGDPS 285
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDF--ASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
A Q+ +P K R++ R F +L ++ + R ++ +ED ++
Sbjct: 286 AARYLQVLDHIPLGNNKARVIVRHYRKFLRNKLLNNLMLFKENQRKIFYKIFDEDYMILK 345
Query: 490 GQQERMNNG 498
Q N G
Sbjct: 346 TQTYNHNMG 354
>gi|424933470|ref|ZP_18351842.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
gi|407807657|gb|EKF78908.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae KpQ3]
Length = 345
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG
Sbjct: 21 RLARCWHPVARACDIAG-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHE 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIW----PGDEP 324
E I CPYHG + DG+C ++PS+ + + K S E+ G+IW P + P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPGQPIPAKLHLTSFAVEERYGLIWTCLACDPDNPP 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P +GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTMP-HWDDAGFQQINCPAFEVKGFAGRQVEGFLDVAHFAWIHTDTFADPDNQQVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP 408
TP + YW YP +FR P
Sbjct: 198 SPQETPFGFVADYWSSVGNYPASSDFRAP 226
>gi|421480173|ref|ZP_15927817.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|400221579|gb|EJO52022.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 370
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
A P +L+ G L R V P+ P ++W+P+A+S +LK +
Sbjct: 3 AVPLPDSNTLEPAGGALVRDLRRV--PIHP------DYWYPLAWSRELKRGKTLGVRFAG 54
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYS-TDGKCEKMPSTQ 298
EP V+ R + G +++ CAHR PLH G V ++C YHGW Y + G+C +P
Sbjct: 55 EPIVLVRTESGAVYALEDRCAHRQVPLHAGVVAGETLRCCYHGWTYDCSSGRCVDVPYLG 114
Query: 299 LRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 353
+ +++ PC E G+I+++PGD P L S + + E+ +
Sbjct: 115 RERLPNGVRAYPCREAHGLIFVFPGDATRADERPFPLLASADDRAYKTRRFGREVKCHYS 174
Query: 354 LLLDNLLDLAHAPFTHTSTFAK 375
+ +NL+D+ H F H +
Sbjct: 175 FMHENLMDMNHQ-FLHRKQMGQ 195
>gi|398849602|ref|ZP_10606336.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250670|gb|EJN35978.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 357
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 15/172 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ A S +LKD + +P V+FR D +++ C HRA PL G+V E ++
Sbjct: 25 WYVAALSRELKDQPL-GRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSGGTVEERGLR 83
Query: 278 CPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLP 334
C YHG ++ GKC ++P K+ + P EQ+ +IWIW G E P P P
Sbjct: 84 CGYHGLLFNEGGKCIEIPGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPE---PTFAP 140
Query: 335 PSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
P +++H+ V + L+ DNL+DL+H + H T S+
Sbjct: 141 PV-YDVHSSGKYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLHTIGGNASI 191
>gi|399078123|ref|ZP_10752723.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034061|gb|EJL27338.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 336
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T + N W+P + +L+ + + P +I+R G+ + + C HR P G++
Sbjct: 2 TYIYNAWYPAGWVHELEKGP-IARKFLDIPVMIYRLSTGVLAALHDRCPHRFAPFSYGTI 60
Query: 272 NEGRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIWPGDEPP--TA 327
E +++C YHG E+ + G+C + + K++S P FEQ+ ++WIW G+E P T+
Sbjct: 61 VEDKVRCIYHGLEFDSAGRCVGNALCFAAPKVAKVRSFPVFEQDNVVWIWMGEEEPADTS 120
Query: 328 TIPCLL---PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
TIP P ++ + ++ LL DNL+DL H H
Sbjct: 121 TIPRYAYHNDPKYRCVYGNNYTKA--DYRLLCDNLMDLTHIVLLH 163
>gi|27376049|ref|NP_767578.1| dioxygenase [Bradyrhizobium japonicum USDA 110]
gi|27349188|dbj|BAC46203.1| blr0938 [Bradyrhizobium japonicum USDA 110]
Length = 445
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 112/275 (40%), Gaps = 44/275 (16%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQ 256
K L SGP L+ FW PV S +L + P E + FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSKELPEADGEPKKIVVLGEELLAFRDSRGVVGVID 67
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 311
C HR L LG E I+C YHGW++ TDG+C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLIRIKSYPVRE 127
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 359
MIW + G +P L E+ M LP H + L+
Sbjct: 128 WGEMIWAYMGPADVMPELPDL----------EMAM-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 412
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHDAGL 235
Query: 413 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 445
S G G+L G + + A L H PS+
Sbjct: 236 SIAG----GRLTGSDNIYWRIAQFLMPFHAYAPSA 266
>gi|414175230|ref|ZP_11429634.1| hypothetical protein HMPREF9695_03280 [Afipia broomeae ATCC 49717]
gi|410889059|gb|EKS36862.1| hypothetical protein HMPREF9695_03280 [Afipia broomeae ATCC 49717]
Length = 360
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 207 VQPYNTRLK------NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV---QN 257
VQP + L+ + W+P+A+S +LK EP V+ R KDG G V ++
Sbjct: 13 VQPPDIDLRRIGSHPDHWYPLAWSKELKPGKTYAAQFAGEPIVLIRPKDG--GAVFALED 70
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEG 314
CAHR PL G V ++C YHGW Y GKC +P +L N +++ PC EQ+G
Sbjct: 71 RCAHRQVPLSKGVVEGCAVRCCYHGWTYDASGKCIDVPYLGKDKLPN-GVRAYPCREQDG 129
Query: 315 MIWIWPGDEPPTATIPCLLPPSGFEIHA----EIVMELPIEHGLLLDNLLDLAHAPFTHT 370
+I IWPGD P A I L P A ++ + + +NL+D+ H F H
Sbjct: 130 LILIWPGD--PKA-ITELGPLGSAHDKAFKTRRFGKQVRCHYTFMHENLMDMNHQ-FLHR 185
Query: 371 STFAK 375
K
Sbjct: 186 RQMGK 190
>gi|289671663|ref|ZP_06492553.1| Rieske [2Fe-2S] region, partial [Pseudomonas syringae pv. syringae
FF5]
Length = 190
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQVVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPGD P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTVSMPGQRVRGFPCNKTFAAVERYGFIWVWPGDREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|46204241|ref|ZP_00050278.2| COG4638: Phenylpropionate dioxygenase and related
ring-hydroxylating dioxygenases, large terminal subunit
[Magnetospirillum magnetotacticum MS-1]
Length = 361
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 138/346 (39%), Gaps = 41/346 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ V + + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LPNAWYCVGPAASVAGGKMRAVALNGEQVVLGRAKDGALFALRDRCPHRGMALSKGKFDG 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSEHDASDFSCIAVQRFPIVESAGFLWVNPHLGPSDL 143
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTHTS-TFAKGWSVPSLVK 384
+P GFE +V+EL +E L +L+D H F H + F + VK
Sbjct: 144 EAVPAVPSLGFEPAGSLVLELEVEASFDLTTLSLVDPGHVAFVHDNWWFRASKELREKVK 203
Query: 385 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
P +S L P +++EFR P + L I T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPLYRLLGGAPEVEIEFRLPGVRLERI---------AAGTK 254
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 490 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 535
Q ++ + L G +RL R+ LE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKRETLEAAREGRPFANPL 352
>gi|359398803|ref|ZP_09191819.1| hypothetical protein NSU_1505 [Novosphingobium pentaromativorans
US6-1]
gi|357600041|gb|EHJ61744.1| hypothetical protein NSU_1505 [Novosphingobium pentaromativorans
US6-1]
Length = 352
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ S+D +D + C + P +R DG + + C HR PL +G +
Sbjct: 3 LKNVWYVAGPSSDFGEDVVSRRIC-DRPVAFYRKSDGSIAALHDRCPHRFVPLSMGQRED 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHG + DG C+ P+ N + + E+ G WIW G+ P
Sbjct: 62 DSLRCGYHGLRFGPDGVCDDKPAGDQENPAKICTQHFAVEERYGYAWIWMGEAENAK--P 119
Query: 331 CLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTH 369
++P F E +++ H L+ DNLLDL+H + H
Sbjct: 120 AMIPDFSFITSGEFKCEAGYLKVQGHHELITDNLLDLSHVNYLH 163
>gi|124268855|ref|YP_001022859.1| oxidoreductase subunit alpha [Methylibium petroleiphilum PM1]
gi|124261630|gb|ABM96624.1| oxidoreductase alpha subunit [Methylibium petroleiphilum PM1]
Length = 407
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 15/176 (8%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV---QN 257
L+ S +Q T ++N W+ S + +V P V++R + G G V
Sbjct: 40 LHSSVEIQVKETLIRNLWYVAGTSDEFAPGQLVGQTIVGLPLVLWRPEAG--GEVVAFDG 97
Query: 258 TCAHRACPLHLGSV-NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQ 312
C H+ PL G + +G ++C YHG + + GKC K+PS R + K++ P EQ
Sbjct: 98 RCCHKRMPLAAGKLLADGTLECAYHGLCFDSAGKCVKIPSQPGRAIPSRAKLRPYPIVEQ 157
Query: 313 EGMIWIWPGDEPPTA----TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAH 364
+GM+WIW GD+ A IP L P I + E+P + LL++NLLD++H
Sbjct: 158 DGMVWIWMGDDANPALRPPRIPELASPEWEAIRVQNA-EVPTNYLLLIENLLDISH 212
>gi|186684792|ref|YP_001867988.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186467244|gb|ACC83045.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 340
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ +FW+ VA S L+ + ++P E IFRG+DG P +++ C HR L G +
Sbjct: 2 QFADFWYIVALSNQLQPNKVLPRTVLGEWLAIFRGEDGQPVALRDRCLHRNSRLSSGKIC 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCF---EQEGMIWIWPGDEPPTA 327
G +QCPYHGW Y G +P+ + + C+ EQ+G +++ D P
Sbjct: 62 NGALQCPYHGWVYDGVGNVIAVPAEGNDFKPSPQRRAKCYATKEQDGYVYVRLADTPSVD 121
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF----------- 373
P +P +G+E ++ +N +D+ H F H F
Sbjct: 122 FEPFSMPHYGQTGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVFRTSRQQKLEMT 180
Query: 374 AKGWSVPSLVKFLTPASGLQGY 395
+ W+ LV++ S L Y
Sbjct: 181 VERWNGSVLVEYRNENSNLGWY 202
>gi|421598258|ref|ZP_16041719.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
gi|404269631|gb|EJZ33850.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
Length = 357
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+S ++ + C + V++R DG+ +++ C HR PL LG +
Sbjct: 10 NAWYAAAWSHEVARELSARTICGKNI-VLYRRVDGLITALEDACWHRLLPLSLGHLKGDD 68
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+ C YHG +++ G+C MP+ + N +++ P E+ ++W+WPGD P P +
Sbjct: 69 VMCGYHGLVFNSAGRCSYMPAQKTINPSACVRAYPVAERHRLVWLWPGD--PALADPTKI 126
Query: 334 PPSGFEIHAEIVME------LPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P + + + E L ++ L++DNL+DL H + H +
Sbjct: 127 PDFHWNDGKQWIGEGGTFYQLKCDYRLVIDNLMDLTHETYVHAGSIG 173
>gi|384221115|ref|YP_005612281.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
gi|354960014|dbj|BAL12693.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 115/287 (40%), Gaps = 44/287 (15%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV 302
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 303 K--IKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 349
+++ P E+ +W+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYVWLWMGD--PALADPALVPDMHWNHDPAWAGDGKTIHVN------ 145
Query: 350 IEHGLLLDNLLDLAHAPFTHTSTFAKG------WSVPSLVKFLTPASGLQG-----YW-- 396
++ L+LDNL+DL H F H S+ + V K +T ++G +W
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 397 ---DPYPID----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKT 449
P +D + F PC + +G++ G + R + L+ P + K
Sbjct: 206 QLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPETEKTC 265
Query: 450 RLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 496
+ ++ + + R + +ED ++ QQ M+
Sbjct: 266 HYFWAFVRNYQIGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 309
>gi|389871176|ref|YP_006378595.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
gi|388536425|gb|AFK61613.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
Length = 363
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ +S D+ + + P E V +R +DG +++ C HR PL +G + +
Sbjct: 3 LKNAWYVAEWSHDIVHE-LYPLQLLNEYLVFYRQQDGQVVALEDACPHRKLPLSMGRLID 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL-RNVKIKSLPCFEQEGMIWIWPG--DEPPTATIP 330
++C YHG ++ G C P ++ R +KS E+ G++W+W G D+ + IP
Sbjct: 62 DAVECGYHGLTFNGQGTCIFAPGAKIPRAATVKSFATTEKYGLVWVWMGDADKADASLIP 121
Query: 331 CLL----PPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
+ P G +++E + + DNLLD +H + H S+F V +
Sbjct: 122 QIAEYGHPDWGINQGDAMIVEC--NYLYMTDNLLDPSHVAWVHRSSFGNSACVNEPLTTT 179
Query: 387 TPASGL 392
SG+
Sbjct: 180 VTDSGV 185
>gi|350567199|ref|ZP_08935784.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
gi|348659611|gb|EGY76364.1| Rieske (2Fe-2S) domain protein [Peptoniphilus indolicus ATCC 29427]
Length = 276
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-N 272
+KN W+ V S+++ + +V V +R G C+ + C+HR L G V N
Sbjct: 2 IKNQWYAVLSSSEVNKNQLVGVRRLGMDLVFYRDNKGEVSCLMDMCSHRGAALSKGEVVN 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRN------VKIKSLPCFEQEGMIWIWPGDEPPT 326
IQCP+HG E++ +G+C+ +P+ + N + E+ +I+IW GD+ +
Sbjct: 62 NCNIQCPFHGLEFNGEGECQFIPANGINNQGDLTRYNVSFFKLIEKHDIIYIWYGDKDKS 121
Query: 327 A-TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+ IP + +E + ++N LD+ H PF H +T G
Sbjct: 122 SDDIPFHDEIDKSFVFSEFKDHWNTHYSRAIENQLDVVHLPFVHHNTIGAG 172
>gi|407697725|ref|YP_006822513.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
gi|407255063|gb|AFT72170.1| Phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Alcanivorax dieselolei B5]
Length = 348
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+ FW+PV L D PF E V++ +G P ++ CAHR L LG V
Sbjct: 9 LRRFWYPVMPLEQLGDGPQ-PFRLMNEELVLWLDSEGKPHAAEDRCAHRTARLSLGWVEG 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRN---VKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I CPYHGW Y G C ++P T R+ K+++ + G +W+ GD P IP
Sbjct: 68 DNIVCPYHGWTYDGGGGCVRIPQTPDRSAGRAKVRAFNAEARYGYVWVCLGD--PLTDIP 125
Query: 331 CLLPPSGFEIHAEIV---MELPIEHGL-LLDNLLDLAHAPFTHTSTFAK 375
+ P E ++ E+ GL L++N D AH F H +F +
Sbjct: 126 HM--PEADEPGYRVIHQFYEVWRTAGLRLMENSFDNAHFSFVHRESFGQ 172
>gi|294627521|ref|ZP_06706104.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292598152|gb|EFF42306.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|357394269|ref|YP_004909110.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
gi|311900746|dbj|BAJ33154.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
Length = 342
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLGSVNE 273
+N W+ A++ ++ DD ++ EP V++R +DG + + C HR PL
Sbjct: 6 RNQWYVAAYAAEVGDD-LLGRTVLGEPVVLYRSAEDGRAIALADRCVHRRFPLSESRREG 64
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 328
I C YHG+ Y G C +P R ++ + P EQ+ ++WIW GD P A
Sbjct: 65 DAIICGYHGFTYDRTGACVSVPGQTRVPRTARVAAYPVVEQDSLVWIWIGD--PAAADAS 122
Query: 329 ----IPCLLPPSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH 369
P L P+ + ME + ++GLL+DNLLDL+H + H
Sbjct: 123 RVPRAPHLADPAMTTVRG---MEPIDADYGLLVDNLLDLSHETYLH 165
>gi|78045876|ref|YP_362051.1| vanillate O-demethylase oxygenase subunit [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|346723235|ref|YP_004849904.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
gi|78034306|emb|CAJ21951.1| putative vanillate O-demethylase oxygenase subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|346647982|gb|AEO40606.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citrumelo F1]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLARHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPARMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVAPDFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHATRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|428297609|ref|YP_007135915.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234153|gb|AFY99942.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 444
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 142/347 (40%), Gaps = 47/347 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRACPLHLGSVNE--G 274
W+P++ DL+ D +P VI++ V + C HR PL G +++ G
Sbjct: 11 WYPLSPVEDLEKDRPIPVKVLGINLVIWKPLSSETFQVFLDECPHRLAPLSEGRIDDQTG 70
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQ--------LRNVKIKSLPCFEQEGMIWIW----PGD 322
+ C YHGW++ + G C +P + N + S P E++ ++W+W D
Sbjct: 71 NLMCSYHGWQFDSQGSCTHIPQAEKAEIIAKNQDNFCVTSFPVREEQDLLWVWLDLNSVD 130
Query: 323 EPPTATIPC--LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA-KGWSV 379
T +P L+ S + + V +L + L++N+ D +H PF H + +
Sbjct: 131 IAATTKLPLSPLVDASKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQGNRDKAK 190
Query: 380 PSLVKFLTPASGL-----QGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH 434
P L++ + + G + P + F PPC + I K G T
Sbjct: 191 PILMQVKDSQADIIEVETVGNFS-VPTKITFEPPCRLEYAIQFGGEDKQMGLVT------ 243
Query: 435 LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV------ 488
C+P S K+RL+ + +FA + W H + L D ++
Sbjct: 244 -----YCIPISPGKSRLVAQFPRNFAK--RAHKLTPRWWDHINNRNLVIDGDMILLRQQE 296
Query: 489 --LGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMK 533
L Q +R + + LP G D+L + YR W D G +LP+ K
Sbjct: 297 QLLQQHQRTESWKTAYKLPTGADRLVIEYRNWFDRYCGG--KLPWEK 341
>gi|399156766|ref|ZP_10756833.1| iron-sulfur protein [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 449
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 19/205 (9%)
Query: 197 PRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
P + L GP P L+ FW PV + DL D V E V+FR G G V
Sbjct: 22 PDEELTQVGPETPCGEYLRRFWHPVYLTNDLCD-LPVTLKILGEELVLFRDLSGTLGLVH 80
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP------STQLR-NVKIKSLPC 309
C HR L G E I+C YHGW + TDGK P S +L+ +K+ + P
Sbjct: 81 KRCPHRQASLEYGKCEEHGIRCCYHGWHFDTDGKLLDAPGQPENLSDRLKLRIKLGAYPV 140
Query: 310 FEQEGMIWIWPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHA 365
E +G+I+ + G P A +P + FE + + P L LD +LD H
Sbjct: 141 VEYKGLIFSYMG---PIAEMPEFPVFDSMEFEKMEMVPYKAPFRCNWLQVLDAILDPLHT 197
Query: 366 PFTHTST----FAKGWSVPSLVKFL 386
F H++ F++G+ + F
Sbjct: 198 SFLHSNIGRVQFSEGFGEVGQMDFF 222
>gi|227015857|gb|ACP17954.1| putative Rieske (2Fe-2S) protein [Pseudomonas nitroreducens]
Length = 353
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A++ +L + + EP VI+R D +++ CAHR PL LG
Sbjct: 3 IRNCWYVAAWTEELSAEFLT-CTIINEPIVIYRKSDNSLVALEDRCAHRMSPLSLGKREG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHG +S G C ++P + +KS P E+ IW+W GD P
Sbjct: 62 DDIRCMYHGLVFSPSGNCIEIPGQDKIPARLCVKSYPVVERHSWIWVWMGD--PELADED 119
Query: 332 LLPPSG-------FEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
L+PP+ F H + E + L+ DNL D +H + HT +F
Sbjct: 120 LIPPAHGGGNNEWFLTHNHLDYE--TNYMLICDNLTDFSHLGYVHTQSFGS 168
>gi|294667820|ref|ZP_06733030.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602446|gb|EFF45887.1| vanillate O-demethylase oxygenase subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|170078842|ref|YP_001735480.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7002]
gi|169886511|gb|ACB00225.1| Rieske [2Fe-2S] domain protein; synechoxanthin biosynthesis
[Synechococcus sp. PCC 7002]
Length = 367
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ A S +L D + F + E +V++R + G +++ C HR L G V
Sbjct: 29 KNHWYVAARSAELTDQPL-GFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLSSGQVVGD 87
Query: 275 RIQCPYHGWEYSTDGKCEKMP---STQLR-NVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHGW++ G C +P Q R KI++LP EQ+G IW++PGD P T
Sbjct: 88 NLECAYHGWQFDASGTCAHVPYLAENQKRPACKIRTLPVREQDGFIWVFPGD-PERLTDE 146
Query: 331 CL--LPPSGFEIHAEIVMELPIE----HGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
+ LP +E IV I+ L++NL+D+ H H + W+ L
Sbjct: 147 AIQPLPIPEWEHLNYIVSVTTIDCEGHFSYLIENLMDMYHG---HLHDNYQAWASAKL 201
>gi|381173066|ref|ZP_09882176.1| Rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|418518068|ref|ZP_13084221.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520106|ref|ZP_13086156.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|380686498|emb|CCG38663.1| Rieske [2Fe-2S] domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410704060|gb|EKQ62545.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705218|gb|EKQ63696.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 350
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|330808947|ref|YP_004353409.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377055|gb|AEA68405.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 347
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ A+ T++K + EP V FR G + + C HR PL +G +
Sbjct: 4 LRNVWYAAAWGTEVKAGELFQRTLLNEPVVFFRDTQGNAQAIADRCPHRFAPLGMGILKG 63
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL---RNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++CPYHG E+ G C P + K+K+ P E+ ++WIW GD
Sbjct: 64 DAVRCPYHGLEFDGSGACVHNPHGDGAIPKAAKVKAYPLVERYSLLWIWMGDA--QLADA 121
Query: 331 CLLPPSGF--EIHAEI---VMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L+P E H + + + L DN++DL+H F H ST
Sbjct: 122 TLIPDFSCMDEDHWYVGKRYLHARANYVLETDNIMDLSHIEFLHPSTLG 170
>gi|367476973|ref|ZP_09476338.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
gi|365270752|emb|CCD88806.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
Length = 452
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L + V + +V+F+ G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQQFVLFKDAQGRYGLLDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DG+C + P S +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCSFHGWLFDVDGQCLETPAEPAGSPLCKNVKQRSYPVIEKGGILWA 133
Query: 319 WPGDEPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
W G+ P A + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAPPAFPDLDCFTAPDTYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|383774963|ref|YP_005454032.1| dioxygenase [Bradyrhizobium sp. S23321]
gi|381363090|dbj|BAL79920.1| probable dioxygenase [Bradyrhizobium sp. S23321]
Length = 452
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ +GP P ++++W P A +L+ + + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGERPIRPVKLLGENLVLFRDETGRYGLIDRLC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 315 MIWIWPGD-EPPT-ATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
++W + G+ EPP I C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 369 H 369
H
Sbjct: 184 H 184
>gi|315497534|ref|YP_004086338.1| rieske (2fe-2S) iron-sulfur domain-containing protein
[Asticcacaulis excentricus CB 48]
gi|315415546|gb|ADU12187.1| Rieske (2Fe-2S) iron-sulfur domain protein [Asticcacaulis
excentricus CB 48]
Length = 367
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
L++ W+ A + DLK + ++ EP ++ R G +++ C HRA PL G +
Sbjct: 21 LRDAWYFAALAHDLKPGKLQRYEILGEPVLLARDTQGKAYAMRDICPHRAAPLSAGKMIP 80
Query: 272 ----NEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIW-- 319
+ +QCPYHGW + T G C +PS + ++++S EQ+G++WI+
Sbjct: 81 DPKTGQPVVQCPYHGWTFGTHGGCTAVPSLTADQPMDVERIRVRSYAVKEQQGIVWIYMT 140
Query: 320 --------PGDEPP-----TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAP 366
P EPP P ++ F+ H I+H ++ L+D AH P
Sbjct: 141 ADARRPAEPDHEPPMLPGVVGGKPIIVESMDFDSH--------IDHAVV--GLMDPAHGP 190
Query: 367 FTH 369
+ H
Sbjct: 191 YVH 193
>gi|158317433|ref|YP_001509941.1| Rieske (2Fe-2S) domain-containing protein [Frankia sp. EAN1pec]
gi|158112838|gb|ABW15035.1| Rieske (2Fe-2S) domain protein [Frankia sp. EAN1pec]
Length = 353
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 14/183 (7%)
Query: 203 VSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
++G + + L++ W PVA S +L D+ + EPWV+ R D + + C HR
Sbjct: 1 MTGRLTNTDPALRHGWHPVARSPELADEPIA-VRLLGEPWVLARLDDQV-AAFADWCPHR 58
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMI 316
PL G V + C YHGW + G+C +P+ R I E+ G++
Sbjct: 59 LAPLSAGRVEGHELVCGYHGWRFVASGECTAVPALGPGIPAPRRARAIPPWGVTERHGLV 118
Query: 317 WIWPGDEPPTATIPCLLPPS---GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
WI P + P A I LP + GF+ GLL DN LD AH PF H +T
Sbjct: 119 WIAPAE--PFADI-IELPEAAEDGFDDAWLPAARTTACAGLLADNFLDTAHFPFVHAATI 175
Query: 374 AKG 376
G
Sbjct: 176 GAG 178
>gi|220908321|ref|YP_002483632.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
gi|219864932|gb|ACL45271.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
Length = 477
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 137/342 (40%), Gaps = 34/342 (9%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPG-CVQNTCAHR 262
+G P W+PV + DL PF + V++ + + C HR
Sbjct: 20 AGGSDPDRFNWHEAWYPVHYVVDLDRTQPTPFTLLGQDLVLWWDRQAESWRAFADQCPHR 79
Query: 263 ACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEG 314
PL G + E G ++CPYHGW ++ +G+C+++P + + + S P ++G
Sbjct: 80 LAPLSEGRIAEDGLLECPYHGWAFTGEGQCDRIPQQFPGQMAHTSKRACVTSFPTTVRQG 139
Query: 315 MIWIWPGDEPPTA---TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPF 367
+++++ GD P A ++P + P + + +LP + LL+N+LD +H PF
Sbjct: 140 LLFVYAGD-PANADRVSVPIIAALEESPQDW-VCLNTFRDLPYDALTLLENVLDSSHVPF 197
Query: 368 THTSTFA-KGWSVPSLVKFLT-PASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
TH + + + P + L G QG+W D R +T I+
Sbjct: 198 THHRSVGNRANAAPVELDMLEFGKQGFQGFWQ----DGPRRGTLGSQTTTFIAPALMWHD 253
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH--VPFMQYLWRHFAEQVLNE 483
T+Q L ++ P + + RL R F S L + + H + E
Sbjct: 254 LTTKQFGRTLTAVYAT-PIRKGECRLFARFPFKFGSRLPALLIKLTPRWYAHIGNNNVLE 312
Query: 484 DLRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
D ++ L QER N A LP D R W
Sbjct: 313 DDQIFLHLQERYLEAQGGSANFAKACYLPTRADTYVTALRKW 354
>gi|158340878|ref|YP_001522046.1| hypothetical protein AM1_D0239 [Acaryochloris marina MBIC11017]
gi|158311119|gb|ABW32732.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 234
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV-QNTCAHRA 263
G P ++ W P+A+ DL + F E+ VI+ + V + C HR
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPSQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 264 CPLHLGSVN-EGRIQCPYHGWEYSTDGKCEKMPST-------QLRNVKIKSLPCFEQEGM 315
PL G + +G ++CPYHGW +S G+C ++P Q R ++SLP ++GM
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 316 IWIWPGDEPPTATIPC-LLPPSGFEIHAEIVM----ELPIEHGLLLDNLLDLAHAPFTH 369
++++PG A IP L+ P + IV+ +LP + LL+N+LD +H PF H
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEEAPNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFAH 210
>gi|209515974|ref|ZP_03264835.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
gi|209503632|gb|EEA03627.1| Rieske (2Fe-2S) domain protein [Burkholderia sp. H160]
Length = 416
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S ++K + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 62 DHWYPLAWSHEVKRGKTLGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 121
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIP 330
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD A P
Sbjct: 122 IRCGYHGWTYDCAGKCVDVPYLGRERLPNGVRSYPCHEVEGLIFVFPGDAALAAERP 178
>gi|149921338|ref|ZP_01909792.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817771|gb|EDM77235.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 360
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 85/178 (47%), Gaps = 23/178 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
++N W+ A+S++L PF ++ R ++G+ G + C HR L G
Sbjct: 4 VRNAWYVAAWSSELGRK---PFARTLLGRHVMLIRTREGVVG-LGAQCPHRHADLSTGEF 59
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCF---EQEGMIWIWPGDEPPTAT 328
+GRI+CPYHGW + G+C ++P T R K LP + E++GMIW+W G+ PT +
Sbjct: 60 GKGRIRCPYHGWSFDMQGRCVEVPGTS-RVPKAACLPRYPARERQGMIWVWFGEGEPTPS 118
Query: 329 IPCLLPPSGFEIHAEIVME--------LPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
PPS FE M + + L++N LD H TH T W+
Sbjct: 119 ----EPPS-FEFSPSQRMRRQRTPPRLWEVSYVDLVENTLDPTHITATHARTLGSRWA 171
>gi|89053936|ref|YP_509387.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863485|gb|ABD54362.1| putative dioxygenase [Jannaschia sp. CCS1]
Length = 437
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDT-MVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P L+ +W P A S +L +VP E V+FR + G G + C HR
Sbjct: 14 GPGAPAGKVLRRYWQPAALSDELMGARPVVPVTLIGEELVLFRDEGGSLGLIGRHCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + + ++CP+HGW + G+C + P S + +K S P E G+IW
Sbjct: 74 ADLAYGRLEDNGLRCPFHGWHFDCSGQCVEQPGEPEGSKMHQQIKAVSYPVRELNGIIWA 133
Query: 319 W--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ GD PP A C P + + E + + +D AHA F H
Sbjct: 134 YMGEGDPPPFAAFDCFRAPDTHVFAFKGLWECNWLQAMEVG--IDPAHASFLH 184
>gi|365881281|ref|ZP_09420602.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 375]
gi|365290555|emb|CCD93133.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 375]
Length = 452
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L + V + +V+F+ + G G + C HR
Sbjct: 14 GPSAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DGKC + P+ + +NV+ +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVDGKCLETPAEPVGSPLCQNVRQRSYPVVEKGGILWA 133
Query: 319 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAAPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|444913675|ref|ZP_21233824.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
gi|444715498|gb|ELW56364.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
Length = 341
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 13/171 (7%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
RL + WF + S++L D + P V+FR +G P + + C HR PL LG V
Sbjct: 2 VRLPHSWFILCTSSELGDKPLARM-LQGSPLVLFRTAEGKPAALADRCPHRNVPLSLGRV 60
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSL-----PCFEQEGMIWIW--PGDEP 324
+G++QC YHGW + + G+C +P + + KS EQEG +W++ PG EP
Sbjct: 61 VKGQLQCGYHGWRFDSSGQCRAVPGL-IGEPEAKSRCATWHATREQEGFVWVYSTPGVEP 119
Query: 325 PTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P L P G+ + H LL+N LD+ H F H F
Sbjct: 120 SHEPYRFPLLDAP-GYSTVRRTLRAGGSLHA-LLENTLDVPHTSFLHGGLF 168
>gi|347760397|ref|YP_004867958.1| vanillate O-demethylase oxygenase [Gluconacetobacter xylinus NBRC
3288]
gi|347579367|dbj|BAK83588.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 360
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 22/193 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L FW+PVA D+ D + +EP V++R + I + C HR PL LGS +
Sbjct: 28 LARFWYPVALERDVGDKPLAAM-LLDEPLVVYRAGEEI-VIAHDLCPHRGVPLSLGSGDG 85
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWI-------WPGD 322
I C YHG+ + G+C ++P+ + +++ P + G+IW WP D
Sbjct: 86 RSIACAYHGFRFGGAGRCVRIPAHPDNAIPSKMNLRTYPAIRRYGLIWTCLRPDGQWPQD 145
Query: 323 EPP---TATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
+A IP L+P GF+ +++ G ++ LD+AH F HT+TFA
Sbjct: 146 ADAIRDSADIP-LMPHWEDVGFQQIVCPSIDIHGFAGRQMEGFLDVAHFAFVHTATFADA 204
Query: 377 WS--VPSLVKFLT 387
+ VPS LT
Sbjct: 205 DNPVVPSYRPVLT 217
>gi|114050057|emb|CAK51082.1| putative vanillate O-demethylase oxygenase subunit A [Streptomyces
ambofaciens]
Length = 362
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 59/324 (18%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A+ ++ + P ++R +G + + C HR PL G +
Sbjct: 27 NAWYVAAWDHEVTGKQPLARTVAGIPLALWRTTEGRAIALADACWHRLAPLSKGRILGDE 86
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
+QCPYHG Y+ G+C MP+ + N + S P E+ +W+W GD P P +
Sbjct: 87 LQCPYHGLRYNATGRCTGMPAQETINPSAVVPSYPVVERYRYVWVWVGD--PDLADPATV 144
Query: 334 PP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------- 375
P G IHA+ + L+LDNL+DL H F H+S+ +
Sbjct: 145 PDMHQMDDPTWAGDGETIHAD------CNYQLILDNLMDLTHEEFVHSSSIGQEELSEAE 198
Query: 376 ------GWSVPSLVKFL----TPASGLQGYWDPYP-----ID----MEFRPPCMVLSTIG 416
G +V ++ +++ P L+ D +P +D + F P + +G
Sbjct: 199 FDVTHEGNTV-TVTRWMRDIDAPPFWLKNMRDKFPGFSGKVDRWQIITFEAPGTIRIDVG 257
Query: 417 ISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQYL 472
++K G + R + + ++ P + + + + LD ++ +
Sbjct: 258 VAKAGTGAPEGDRTQGVNGYVMNTITPETDRTSHYFWAFMRNYRLDSQTITTQL------ 311
Query: 473 WRHFAEQVLNEDLRLVLGQQERMN 496
R V ED ++ QQ ++
Sbjct: 312 -RQAVHGVFGEDEEMLCAQQRAID 334
>gi|86611381|gb|ABD14374.1| vanillate monooxygenase oxygenase subunit [Rhodococcus sp. DK17]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 QQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|242037721|ref|XP_002466255.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
gi|241920109|gb|EER93253.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
Length = 525
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 40/299 (13%)
Query: 257 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRN--------VKIKSL 307
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 128 DACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSPKACVASY 187
Query: 308 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 358
PC Q ++W +P +P + P +P P ++ + +LP + +L++N
Sbjct: 188 PCVVQNNILWFYPRADPEYKDVLQRKRPPFIPEIDDPEFVTVYG--IRDLPYGYDILIEN 245
Query: 359 LLDLAHAPFTHTST------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-MEFRPPCMV 411
LLD AH P+ H + + PS +K + +QG+ P +F PC
Sbjct: 246 LLDPAHVPYAHKGIIRGILEYDREGGGPSKMKIEQ--ANIQGFVSPQERGYFQFVAPCT- 302
Query: 412 LSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY 471
+ P ++ ++ + + +C+P S ++R+++ + L H+ ++
Sbjct: 303 ----SFAAPFPQPQEDKKKKVPRVMLVFLCIPVSPGRSRVIWAFPRNIGVWLHHI-TPRW 357
Query: 472 LWRHFAEQVLNEDLRLVLGQQERMNN-GANVWN----LPVGYDKLGVRYRLWRDALEKG 525
L+ VL+ D+ L+ ++ + G + W +P D + V +R W K
Sbjct: 358 LYHVGQNLVLDSDIFLLHVEERKFATVGLDNWQKACYVPTSSDSMVVAFRNWFKKFSKN 416
>gi|347760510|ref|YP_004868071.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
gi|347579480|dbj|BAK83701.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
Length = 377
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA+S DLK D + P V+ R ++G + + C HR PL G+VN
Sbjct: 28 DFWYPVAWSADLKKDKTLAVSYAGTPIVLVRPEEGSVFALYDRCPHRQVPLSKGTVNGQT 87
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHGW + G+C +P +L N +++ P E G+I+I+PGD T+P
Sbjct: 88 VRCCYHGWAFGRSGRCIDVPYLGKGKLPN-GVRTFPVREAGGLIFIFPGDPEKADTVP 144
>gi|91786893|ref|YP_547845.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91696118|gb|ABE42947.1| Rieske (2Fe-2S) region [Polaromonas sp. JS666]
Length = 350
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 223 FSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHG 282
+ ++K M E V +R +DG +Q+ C HR PLHLG + I+C YHG
Sbjct: 4 WGNEVKSGEMFHRKLLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHG 63
Query: 283 WEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPT-ATIP---CLLPP 335
+ GKC K P + +++S P E+ GM+WIW G + TIP L
Sbjct: 64 LTFDCSGKCVKNPHGDGKVPAAARVRSYPVAEKHGMLWIWMGSQAADPVTIPDYSVLESE 123
Query: 336 SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+GF + + + + L+ +NLLDL+H + H
Sbjct: 124 AGFAT-SRGYLHIEANYELMGENLLDLSHITYLH 156
>gi|397734225|ref|ZP_10500935.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396929893|gb|EJI97092.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 QQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|336177381|ref|YP_004582756.1| Rieske (2Fe-2S) domain-containing protein [Frankia symbiont of
Datisca glomerata]
gi|334858361|gb|AEH08835.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia symbiont of
Datisca glomerata]
Length = 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRI 276
W+ +S DL+ ++P + + +FRGK G G V + C H L G+V + RI
Sbjct: 35 WYFARYSEDLEPGQVLPVEFMSHQFALFRGKSGRVGMVDSQCCHMGADLGRCGTVVDDRI 94
Query: 277 QCPYHGWEYSTDGKCEKMPSTQLRNVKI------KSLPCFEQEGMIWIWPGDEPPTATIP 330
+C YH WE+ TDG CE +P L KI +++P E G IW W G EP +
Sbjct: 95 KCGYHAWEFRTDGGCEVIPG--LDQAKIPPRAGQRAIPVREHAGNIWFWYGPEPVGEFVE 152
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLL---DNLLDLAHAPFTHTST 372
+P + + + + ++ G LL +++ D+ H P H
Sbjct: 153 --VPYADSKKYLNLKGQIYTARGTLLPVAEHVSDIYHFPVAHKGV 195
>gi|424859149|ref|ZP_18283163.1| vanillate monooxygenase subunit [Rhodococcus opacus PD630]
gi|356661658|gb|EHI41969.1| vanillate monooxygenase subunit [Rhodococcus opacus PD630]
Length = 357
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|386397519|ref|ZP_10082297.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
gi|385738145|gb|EIG58341.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
Length = 349
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 109/291 (37%), Gaps = 52/291 (17%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN- 301
V++R DG +++ C HR PL G + + C YHG +Y+ G+C MPS + N
Sbjct: 34 VMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGRCTFMPSQETINP 93
Query: 302 -VKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP-----------SGFEIHAEIVMELP 349
+++ P E+ IW+W GD P P L+P G IH
Sbjct: 94 SACVRAYPVVERHRYIWLWMGD--PALADPALVPDLHWNHDPAWAGDGKTIHVN------ 145
Query: 350 IEHGLLLDNLLDLAHAPFTHTSTFA------------------------KGWSVPSLVKF 385
++ L+LDNL+DL H F H S+ +G P
Sbjct: 146 CDYRLVLDNLMDLTHETFVHGSSIGNEAVAEAPFDVTHGEKTVTVTRWMRGIEAPPFWAK 205
Query: 386 LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 445
SGL W + F PC + +G++ G + R + L+ P +
Sbjct: 206 QLGKSGLVDRWQI----IRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLNTITPET 261
Query: 446 RKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMN 496
K + ++ + + R + +ED ++ QQ M+
Sbjct: 262 EKTCHYFWAFVRNYQLGEQRITTEI---REGVSGIFHEDELILEAQQRAMD 309
>gi|239820953|ref|YP_002948138.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805806|gb|ACS22872.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 341
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 39/332 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ +A+ ++ DD + +EP +++R + G +Q+ C HR PL G
Sbjct: 3 VRNCWYVIAWDHEISDDALFTRTVLDEPILVYRTEGGELVAMQDRCCHRHAPLSRGRREG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG +++ DG C + P VK +++ P I++W GD P+
Sbjct: 63 DCVRCGYHGLKFAADGVCVEAPGLASIPVKARVRTYPVVSHNKWIFVWMGD--PSLADRA 120
Query: 332 LLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTF----AKGWSVPSL 382
LLP + H + + + L+ DNLLD +H + H T A +VP +
Sbjct: 121 LLPDNFSCDHPDWRYRPGYVHYDTPYLLVCDNLLDFSHLSYVHEGTLGGSTAIAQAVPRI 180
Query: 383 VK------------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLE 424
K F + D Y I +F P +L G + G+ E
Sbjct: 181 EKVPRGIRVTRHVPDVPPSPFWKSFQSFESNVDRYFI-YDFLLPGTLLMKSGGAPVGQAE 239
Query: 425 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 484
+ ++ LH P + T ++ S S + + ++R ED
Sbjct: 240 --DEQRGGVQLHSCQALTPETATTTHYFFQQS--HRSSIADPAVTETIYRGLV-TAFEED 294
Query: 485 LRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
++ Q ++ A + LP+ D V+YR
Sbjct: 295 REMITAQYLNIDPEARM--LPLAMDAALVQYR 324
>gi|111021144|ref|YP_704116.1| vanillate monooxygenase oxygenase subunit [Rhodococcus jostii RHA1]
gi|110820674|gb|ABG95958.1| possible vanillate monooxygenase oxygenase subunit [Rhodococcus
jostii RHA1]
Length = 356
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R +++S EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLRSYQVVEQDSFVWVWIADPQNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 QQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|374984177|ref|YP_004959672.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
gi|297154829|gb|ADI04541.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
Length = 450
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD-DTMVPFDCFEEPWVIFRGKDGIPGCVQN 257
K L +GP P ++ +W P+A S +L +V + V+FR G G V
Sbjct: 7 KRLTRTGPGTPAGEWMRRYWQPIALSEELDGIRPLVAPKVMGQDLVLFRDDGGRLGLVDR 66
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKC-----EKMPSTQLRNVKIKSLPCFEQ 312
C HR L LG + +G ++C +HGW + DG C E + ST V + S P E+
Sbjct: 67 GCPHRGADLSLGRLEDGGLRCCFHGWLFGRDGSCLDTPAEPVGSTLASRVTLGSYPVRER 126
Query: 313 EGMIW--IWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
G+IW + PG+ P + C P+ + ++E L + +D AHA + H
Sbjct: 127 NGIIWGYLGPGEPPELPALDCFRAPADRAFAWKGLLECNWLQALEVG--IDPAHASYLH 183
>gi|404213336|ref|YP_006667511.1| Phenylpropionate dioxygenase-related ring- hydroxylating
dioxygenase, large terminal subunit [Gordonia sp. KTR9]
gi|403644135|gb|AFR47375.1| Phenylpropionate dioxygenase-related ring- hydroxylating
dioxygenase, large terminal subunit [Gordonia sp. KTR9]
Length = 425
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDL--KDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHR 262
GP ++N+W P S+ L D + F E +V FRG+DG+ G + C HR
Sbjct: 13 GPGTAMGAVVRNYWLPAFPSSRLPATDSDPIRVRLFGENYVAFRGEDGVIGFLDELCPHR 72
Query: 263 ACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRN-VKIKSLPCFEQEGMIWI 318
PL LG I+C YHGW+ TDG + P S+ +RN +K + P E G++W+
Sbjct: 73 GAPLVLGHQEGCAIRCLYHGWKIGTDGTVLETPNADSSAIRNGLKANAFPVEESHGLVWV 132
Query: 319 WPGDEPPTATIPCLLPPSGFEIHA---EIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 373
+ G + P P +E+ +V+++ + + L+ LLD +HA H
Sbjct: 133 YLGTQDPVPPRPRY----AWEMEKPENTLVVDVDWDCNWVQALEGLLDSSHAGILHADIL 188
Query: 374 AK 375
K
Sbjct: 189 KK 190
>gi|415942530|ref|ZP_11555927.1| Putative ferridoxin oxidoreductase subunit [Herbaspirillum
frisingense GSF30]
gi|407758833|gb|EKF68603.1| Putative ferridoxin oxidoreductase subunit [Herbaspirillum
frisingense GSF30]
Length = 388
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 151/365 (41%), Gaps = 41/365 (11%)
Query: 183 STSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPW 242
S ++ S DI++G S ++ P+ + N W+ AFS ++ ++ +
Sbjct: 4 SMTQPSHDIIRGAQVAMS-RLADRNTPF---IFNEWYVAAFSDEVGR-FLLKRTLLGKRV 58
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 300
+++R + G P + + C HR+ PL G ++ + C YHG Y G C + P+ +
Sbjct: 59 ILYRTEAGNPVVMDDRCVHRSYPLSAGQLDGDTVVCGYHGLRYDASGDCIEAPAVAKCPK 118
Query: 301 NVKIKSLPCFEQEGMIWIWPG-----DEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL 355
N+ +++ P E+ +IWIW G DE +P ++ A+ +L + L
Sbjct: 119 NIGVRTYPLAERGPVIWIWMGDPALADESKVPALPWMMDSEW--AGAKGYYDLKSSYVYL 176
Query: 356 LDNLLDLAHAPFTHTSTFAK------------GWSVPSLVKFLTPA---------SGLQG 394
+NLLD +H + H +T G +LV+ ++P +GL G
Sbjct: 177 HENLLDTSHLSYMHANTIGSPDYVKAPTKSEMGEGRFALVRTVSPTKLPPVWGKPTGLDG 236
Query: 395 YWDPYPI-DMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
I EF P + T + EG+ + H+ P++ T
Sbjct: 237 VPTASRIVRNEFLTPALYEVTTRLYDSALAEGERPEFL---IKVAHMATPATHNTTHYFI 293
Query: 454 RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGV 513
+ DFA + Q++ +F + + + L L ++ G +++ + + D LGV
Sbjct: 294 YLGRDFAQTDEAA--TQFMATNFFKAFDEDVVGLSLLEEVIAEQGDDLYEISIASDALGV 351
Query: 514 RYRLW 518
R +
Sbjct: 352 AMRRY 356
>gi|442318730|ref|YP_007358751.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441486372|gb|AGC43067.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 337
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 147/370 (39%), Gaps = 70/370 (18%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 260
+ P++ Y +W PVAFS ++++ V F V++R G+ Q CA
Sbjct: 1 MRTQDPLRSYQEVFSAYWHPVAFSHEVQERP-VAFRLLGTEGVVWRSDTGV-AATQRYCA 58
Query: 261 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL----RNVKIKSLPCFEQEGMI 316
HR L G ++C +HGW Y DG+C ++PS + ++ + C E+ G+I
Sbjct: 59 HRGADLCQGERVTQGLRCAFHGWTYGRDGQCLRIPSQPSAPIPASARLDTYRCHERYGLI 118
Query: 317 WIWPGDEPPTATIPCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
W+ D P A +P + A + ++ + G +++ +LD+AH + H TF
Sbjct: 119 WVCLADT-PAAPLPEWPELEDGTVAAVALPRLDWEVSAGRMMEIILDVAHLSWVHRGTFG 177
Query: 375 K--------------GWSVPSLVKFLTPASGLQG----------YWD---PYPIDMEFRP 407
V S + + A G++G +D P+ + + F+P
Sbjct: 178 NPEQPEVPPYEVERHSGGVRSRIVYPALAPGMEGAPGRVDRTTLTYDVTLPFAVRLAFKP 237
Query: 408 PCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVP 467
T+ V P S +K + Y FAS H P
Sbjct: 238 TLFYAHTV----------------------YAVASPLSEEKMQCFY-----FAS---HHP 267
Query: 468 FMQYLWRHFAEQ---VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEK 524
++ F + +L +D R+ GQ+ R + + V D L + YR AL
Sbjct: 268 KIRNFGEMFVKSELAILEQDRRVAEGQRPRAHPVDFAHEVHVKADSLPIEYRRAVAALRL 327
Query: 525 G-AKQLPFMK 533
G A +LP ++
Sbjct: 328 GDAPRLPGLE 337
>gi|325920841|ref|ZP_08182740.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
gardneri ATCC 19865]
gi|325548677|gb|EGD19632.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
gardneri ATCC 19865]
Length = 350
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 134/336 (39%), Gaps = 52/336 (15%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
RL W VA S+++ PF +E V++R D + ++ C HR PL +G+
Sbjct: 21 RLAQHWHAVALSSEVG---QAPFKATLLDESLVLYRLGDELVAA-RDVCPHRGVPLSMGT 76
Query: 271 VNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPPT 326
+ G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 77 ADGGGVVCAYHGLRFGAGGRCNHIPASPNQNIPAKMRLHTYAVAERYGLIWVCLSKPAGV 136
Query: 327 ATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GWS 378
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 137 SEAEVQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKRE 196
Query: 379 VPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISKP 420
VP+ TP Y Y +DM E P TI P
Sbjct: 197 VPAYTTTETPTGFNADYLSSVANYSVDMPLPDVDPSFQWLRHFEVHLPFTATLTIHFPVP 256
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
GK L ++ P S+ KTRLL ++ +F + H+P F +V
Sbjct: 257 GK-----------RLVIMNAASPVSKHKTRLLVPIARNFDT---HLPVEDV--HAFNLRV 300
Query: 481 LNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
ED +V Q+ + + + D+ + YR
Sbjct: 301 FEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|395004285|ref|ZP_10388352.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
gi|394317811|gb|EJE54304.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
Length = 343
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 30/236 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ ++ D + C E+ V +R + + C HR PL LG V +G
Sbjct: 4 KNAWYVACTPDEIADKPLGRTICGEK-MVFYRPAPDQVAALDDFCPHRGAPLSLGKVCDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNV-KIKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
++ C YHG DGK MP +++ + ++ P E+ G IW+WPGD + A I
Sbjct: 63 QLMCGYHGLRVGCDGKAVSMPGQRVQGFPRTRNFPAVERYGFIWVWPGDAAQADPAKIHH 122
Query: 332 LLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW--SVPSLVK---- 384
L E + + + ++ L++DNL+DL H + H+++ + VP +
Sbjct: 123 LAWAESPEWAYGGGLYHIACDYRLMVDNLMDLTHETYVHSNSIGQKEIDEVPCKTRVEGD 182
Query: 385 ---------------FLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPG 421
F A + G D P+D F PP VL +G++ G
Sbjct: 183 EVITSRFMENIQAPPFWQMALRMNGLPDDQPVDRWQVCHFTPPSHVLIEVGVALAG 238
>gi|385206143|ref|ZP_10033013.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385186034|gb|EIF35308.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 406
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTEAGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCHEVEGLIFVFPGD 160
>gi|167566723|ref|ZP_02359639.1| Rieske (2Fe-2S) domain protein [Burkholderia oklahomensis EO147]
Length = 382
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 180 ASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFE 239
A P ++D V R V P+ P + W+P+A+S ++K +
Sbjct: 3 AGPLLDSSAIDPVASAPVRDLRRV--PIHP------DHWYPLAWSKEVKRGKALGVHFAG 54
Query: 240 EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---S 296
+P V+ R + G +++ CAHR PLH G V I+C YHGW Y G C +P
Sbjct: 55 DPIVLVRTRSGTIFALEDRCAHRQVPLHAGVVEGESIRCGYHGWTYDCSGHCVDVPYIGR 114
Query: 297 TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAE---IVMELPIEHG 353
+L N +++ PC E G+I+++PGD P S + + E+ +
Sbjct: 115 ARLPN-GVRAYPCREAHGLIFVFPGDAALAEERPLPALASAADKAYKTRRFGREVKCHYS 173
Query: 354 LLLDNLLDLAH 364
+ +NL+D+ H
Sbjct: 174 FMHENLMDMNH 184
>gi|148252459|ref|YP_001237044.1| dioxygenase [Bradyrhizobium sp. BTAi1]
gi|146404632|gb|ABQ33138.1| putative dioxygenase [Bradyrhizobium sp. BTAi1]
Length = 452
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L D V + +V+F+ + G G + C HR
Sbjct: 14 GPSAPAGKLMRMYWQPAALVDELTGDRPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + +G+C + P S +NVK ++ P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVEGQCLETPAEPAGSALCKNVKQRAYPVVEKGGILWA 133
Query: 319 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGNGAAPAFPDLDCFTAPEAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|258512017|ref|YP_003185451.1| Rieske (2Fe-2S) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478743|gb|ACV59062.1| Rieske (2Fe-2S) iron-sulphur domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 127/331 (38%), Gaps = 49/331 (14%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 264
PV + W+ V FS L + V+FR G + C HR
Sbjct: 6 APVPSEDRVFPATWYAVCFSAQLTRRRPLAARVAGRDLVLFRDASGHVRALSRYCTHRGA 65
Query: 265 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP 320
L LG G + C YHGW++ DG+C +P+ R + ++ P E+ G+ W++
Sbjct: 66 DLALGRAEGGHLACAYHGWQFQGDGRCTLIPAHPDRPIPDFAHNRAYPACERGGIAWVYL 125
Query: 321 GDE--PPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
G E PP + L + + E V + + +++++LD+AH F H T G
Sbjct: 126 GGETSPPEPRVFSELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTI--GR 181
Query: 378 SVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
P+++ + G+ YW P + I +P + +G
Sbjct: 182 RTPAIIPRVSFDADDSDRILIRNGGGVLEYWFP---------------QMWILRPAEGKG 226
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
P + TR+L FA + VP M L+R ++ +VL ED
Sbjct: 227 G--------FLNFVTFTPVDAETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQ 275
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
R+V Q R A V D VR+R
Sbjct: 276 RVVESQHPRPIPEALRMEAHVPADAPQVRFR 306
>gi|422652104|ref|ZP_16714892.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
gi|330965175|gb|EGH65435.1| vanillate O-demethylase, oxygenase subunit [Pseudomonas syringae
pv. actinidiae str. M302091]
Length = 354
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 9/167 (5%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D D + E V +R ++ V++ C HR PL LG V G
Sbjct: 4 KNAWY-VACTADEVADKPLGRQICNEKMVFYRDQNQQIVAVEDFCPHRGAPLSLGYVENG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-KSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
++ C YHG DGK MP ++R K+ E+ G IW+WPG+ P L+
Sbjct: 63 QLVCGYHGLVMGGDGKTASMPGQRVRGFPCNKTFAAVERYGFIWVWPGEREKAD--PALI 120
Query: 334 PPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ + E + + ++ L++DNL+DL H + H S+ +
Sbjct: 121 HHLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQ 167
>gi|307726787|ref|YP_003910000.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307587312|gb|ADN60709.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 402
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|325927780|ref|ZP_08189007.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
perforans 91-118]
gi|325541855|gb|EGD13370.1| ring-hydroxylating dioxygenase, large terminal subunit [Xanthomonas
perforans 91-118]
Length = 350
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLARHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPARMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F HT+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVHTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPTFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVETQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|423128479|ref|ZP_17116158.1| hypothetical protein HMPREF9694_05170 [Klebsiella oxytoca 10-5250]
gi|376392961|gb|EHT05622.1| hypothetical protein HMPREF9694_05170 [Klebsiella oxytoca 10-5250]
Length = 345
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 128/308 (41%), Gaps = 42/308 (13%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARACDIGP-APVKATLLDEQLVIYRIKGQV-VVARDVCPHRGVPLTLGFHD 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWIWPGDEPPTAT 328
E I CPYHG + DG+C ++PS+ + V K S E+ G+IW +P
Sbjct: 79 EEGIVCPYHGLRFGEDGRCNRIPSSPDQPVPAKLNLTSFAVEERYGLIWTCMAFDPENPM 138
Query: 329 IPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 383
++P GF+ E+ G ++ LD+AH + HT TFA VP+
Sbjct: 139 PLPVMPHWHDDGFQQINCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQVVPNYT 198
Query: 384 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 428
TP + YW YP EFR P +T+ I PG+
Sbjct: 199 PQETPFGFIADYWSSVGNYPASSEFRAPEGFQWLRHFEMHLPFTATLTIHFPGE------ 252
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
L ++ P S + TR+ ++ +F HVP F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRITRMFAPIARNFD---LHVPVEDV--HAFNLRVFEEDRLMV 303
Query: 489 LGQQ-ERM 495
Q+ ER+
Sbjct: 304 ETQRPERL 311
>gi|84687812|ref|ZP_01015682.1| possible phthalate dioxygenase [Maritimibacter alkaliphilus
HTCC2654]
gi|84664184|gb|EAQ10678.1| possible phthalate dioxygenase [Rhodobacterales bacterium HTCC2654]
Length = 464
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 179 CASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDT-MVPFDC 237
C + + + I+ + ++ GP P L+ +W P A S +L +VP
Sbjct: 12 CNHCAANDRQGGIMISQQLNDTITRVGPGTPAGEVLRRYWQPAALSDELAGKRPVVPVTL 71
Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-- 295
E V+FR +G G + C HR L G + + ++CP+HGW + G+C + P
Sbjct: 72 LGEELVLFRDSEGELGLIDRHCPHRGSDLCYGRLEDNGLRCPFHGWHFDRTGQCVEQPGE 131
Query: 296 ---STQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTATIPCLLPPSGFEIHAEIVMELPI 350
S +K S P E+ G+++ + PGD PP C P + + E
Sbjct: 132 PEGSKMHEQIKTTSYPVEERNGIVFAYMGPGDPPPFPNFDCFRAPDSHVFAFKGLWECNW 191
Query: 351 EHGLLLDNLLDLAHAPFTH 369
L + +D AHA F H
Sbjct: 192 LQALEVG--IDPAHASFLH 208
>gi|384103330|ref|ZP_10004307.1| vanillate monooxygenase oxygenase subunit [Rhodococcus imtechensis
RKJ300]
gi|383839171|gb|EID78528.1| vanillate monooxygenase oxygenase subunit [Rhodococcus imtechensis
RKJ300]
Length = 357
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ ++ C YHG+ Y +DG C +P R ++KS EQ+ +W+W D + P
Sbjct: 61 SRLDGDKVVCGYHGFTYGSDGGCVFVPGQARVPRTARLKSYQVVEQDSFVWVWIVDPQNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFA 460
+ IG PG +G + A H ++ PS+ T + ++ DFA
Sbjct: 240 APIGAPLPGD-DGSDPH--AFHSEIVYAITPSTENSTLDFWAVARDFA 284
>gi|167573798|ref|ZP_02366672.1| Rieske (2Fe-2S) domain protein [Burkholderia oklahomensis C6786]
Length = 377
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACP 265
P+ P + W+P+A+S ++K + +P V+ R + G +++ CAHR P
Sbjct: 22 PIHP------DHWYPLAWSNEVKRGKALGVHFAGDPIVLVRTRSGTIFALEDRCAHRQVP 75
Query: 266 LHLGSVNEGRIQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGD 322
LH G V I+C YHGW Y G C +P +L N +++ PC E G+I+++PGD
Sbjct: 76 LHAGVVEGESIRCGYHGWTYDCSGHCVDVPYIGRARLPN-GVRAYPCREAHGLIFVFPGD 134
Query: 323 EPPTATIPCLLPPSGFEIHAE---IVMELPIEHGLLLDNLLDLAH 364
P S + + E+ + + +NL+D+ H
Sbjct: 135 AALAEERPLPALASAADKAYKTRRFGREVKCHYSFMHENLMDMNH 179
>gi|218291425|ref|ZP_03495351.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218238715|gb|EED05933.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 127/331 (38%), Gaps = 49/331 (14%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 264
PV + W+ V FS L V+FR G + C HR
Sbjct: 6 APVPSEDRVFPATWYAVCFSAQLTRRRPHAARVAGRDLVLFRDASGHVRALSRYCTHRGA 65
Query: 265 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWP 320
L LG V G + C YHGW++ DG+C +P+ R + ++ P E+ G+ W++
Sbjct: 66 DLALGRVEGGHLACAYHGWQFQGDGRCTLIPAHPDRPIPDFAHNRAYPACERGGIAWVYL 125
Query: 321 GDE--PPTATIPCLLPPSGFE-IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
G E PP + L + + E V + + +++++LD+AH F H T G
Sbjct: 126 GGETSPPEPRVFSELTDGSYRLVPYEDVWQAHLTR--VVESVLDVAHLAFVHRKTI--GR 181
Query: 378 SVPSLVK------------FLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG 425
P+++ + G+ YW P + I +P + +G
Sbjct: 182 RTPAIIPRVSFDADDSDRILIRNGGGVLEYWFP---------------QMWILRPAEGKG 226
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
P + TR+L FA + VP M L+R ++ +VL ED
Sbjct: 227 G--------FINFVTFTPVDAETTRILGYAGRTFA---RSVPGMDALFRRYSLRVLREDQ 275
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
R+V Q R A V D VR+R
Sbjct: 276 RVVESQHPRPIPEALRMEAHVPADAPQVRFR 306
>gi|187921712|ref|YP_001890744.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720150|gb|ACD21373.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 406
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREIEGLIFVFPGD 160
>gi|84683562|ref|ZP_01011465.1| Rieske (2Fe-2S) region protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84668305|gb|EAQ14772.1| Rieske (2Fe-2S) region protein [Maritimibacter alkaliphilus
HTCC2654]
Length = 429
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPF--DCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
P ++ +W P+A S +L + P + E V+FR +G G +Q +C HR L
Sbjct: 18 PMGKVMRRYWHPIALSEELPEPDCKPIRAELLGEKLVVFRDSEGKVGVLQESCMHRGASL 77
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWIW--- 319
LG V +G ++C YHGW+++ DG P+ VK + PCF E+ G+IW
Sbjct: 78 ALGRVEDGGVRCLYHGWKFAVDGTILDTPNNPDPRVKQRLKQPCFPVREEGGLIWTVVGA 137
Query: 320 -PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
G+EPP + P+ E + + + + L + D +H H + + GW
Sbjct: 138 KKGEEPPFRRYSFMDAPA--EHRLALRINVKCNYLQLWEGGADSSHVGILHAESASPGW 194
>gi|118464956|ref|YP_882223.1| oxygenase KshA [Mycobacterium avium 104]
gi|118166243|gb|ABK67140.1| oxygenase KshA [Mycobacterium avium 104]
Length = 370
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
Q TR W + D D P + F + V+FRG DG + C H L
Sbjct: 12 AQAVPTRFARGWHCLGLIRDFGDGKPHPINAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 71
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 323
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 72 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 131
Query: 324 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 132 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 184
>gi|302381678|ref|YP_003817501.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Brevundimonas subvibrioides ATCC 15264]
gi|302192306|gb|ADK99877.1| Rieske (2Fe-2S) iron-sulfur domain protein [Brevundimonas
subvibrioides ATCC 15264]
Length = 370
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG- 274
+ W+ VA S D+ ++ + EP ++ R +DG +++ C HRA PL G + +
Sbjct: 27 DTWYFVALSRDVAVASLKRHELLGEPVLVGRRRDGQVYAMRDICPHRAAPLSAGRLVQKP 86
Query: 275 ----RIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEP 324
++CPYHGW + TDG C +PS + ++++S P E +GM++++ +P
Sbjct: 87 GEPEAVECPYHGWRFGTDGVCAAIPSLVDDQPYEADRIRVRSYPVAESQGMVFVYVRSDP 146
Query: 325 PTATIPCLLPPS-----GFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTH 369
+ P PP+ G E M+ I+H ++ L+D AH P+ H
Sbjct: 147 RSDAAPDHPPPTFPGVVGGEAKLVEWMDFDSHIDHAVV--GLMDPAHGPYVH 196
>gi|399078115|ref|ZP_10752715.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034053|gb|EJL27330.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 338
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 126/313 (40%), Gaps = 52/313 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ A++ ++ D T + P + +R DG +++ C HR PL +G + +
Sbjct: 4 LYNAWYVAAWAHEI-DQTFFTRTLLDLPVLFYRKPDGQVVAMEDACPHRFAPLSMGVLVD 62
Query: 274 GRIQCPYHGWEYSTDGKC--EKMPSTQLRNVKIKSLPCFEQEGMIWIW--PGDEPPTATI 329
G+++C YHG E+ G C + + ++++ P FEQ+ +IWIW PG PT I
Sbjct: 63 GKVRCGYHGLEFDEHGACVGSCINVVAPKAARVRTFPVFEQDNIIWIWMGPGPAGPTEAI 122
Query: 330 PCLLPPSGFEIHAEIVMELPI--------EHGLLLDNLLDLAHAPFTHT----------- 370
F H + + P+ ++ L DNL+DL H H
Sbjct: 123 ------VRFPFHTDSALR-PVFGVSAAKADYRLFSDNLMDLTHTAMLHPLFGGLNYQPKF 175
Query: 371 STFAKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG------KLE 424
++ +G V S P+S L G P + TI PG ++
Sbjct: 176 RSWEEGDDVVSEYTSEAPSSMLVG-----------DTPVTGVDTIRWRAPGIHSLLTRVT 224
Query: 425 GQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNED 484
++ A + H+ P + T + +L S + F+ L + F +ED
Sbjct: 225 PKDAAFQAAEMPAAHIVTPETATSTHYFWASALPKDSPVSSEAFLASLTQVFD----HED 280
Query: 485 LRLVLGQQERMNN 497
++ Q RM
Sbjct: 281 KPMIEAVQRRMGQ 293
>gi|433647375|ref|YP_007292377.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
gi|433297152|gb|AGB22972.1| ring-hydroxylating dioxygenase, large terminal subunit
[Mycobacterium smegmatis JS623]
Length = 351
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 16/171 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+ W+P+A + DL D V FR D P + + C HR LHLG+V
Sbjct: 10 LRRGWYPIARAVDL--DRPRQATLLGRRLVTFRTADNRPRVLPDRCLHRGGALHLGAVIG 67
Query: 274 GRIQCPYHGWEY-STDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
I+CPYHGW + DG C +PS ++ I + P E+ G++W GD P
Sbjct: 68 DSIECPYHGWRWRGADGHCVYIPSNGPSAPIPKSAVIDAFPTVERYGLVWTCVGD--PLT 125
Query: 328 TIPCL--LPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTFA 374
P L L P G A ++ +E G+L ++N D+AH PF H T
Sbjct: 126 GPPHLPELEPLGMTYAAGDPVD--VEAGILAAMENFRDVAHFPFVHRGTMG 174
>gi|407709852|ref|YP_006793716.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407238535|gb|AFT88733.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 402
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|323529012|ref|YP_004231164.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323386014|gb|ADX58104.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 402
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|254775483|ref|ZP_05216999.1| oxygenase KshA [Mycobacterium avium subsp. avium ATCC 25291]
Length = 370
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 207 VQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
Q TR W + D D P + F + V+FRG DG + C H L
Sbjct: 12 AQAVPTRFARGWHCLGLIRDFGDGKPHPINAFGQKLVVFRGGDGAINVLDGYCRHMGGDL 71
Query: 267 HLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE- 323
G V I CP+H W + DG+C+++P ++ R + ++ +Q+GM+++W E
Sbjct: 72 SRGEVKGNEIACPFHDWRWGGDGRCKQVPYSRRTPRLARTRAWTTLQQDGMLFVWNDPEG 131
Query: 324 ---PPTATIPCLLPPSGFE-----IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
PP TIP + E ++ +V E ++DN++D+AH + H S
Sbjct: 132 NPPPPEVTIPRIEGAGSDEWTDWHWYSTVVQSNCRE---IIDNVVDMAHFFYIHGS 184
>gi|340777444|ref|ZP_08697387.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
aceti NBRC 14818]
Length = 193
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA+S +LK + +P + R ++G +++ CAHR PL G V
Sbjct: 39 DFWYPVAWSRELKRGKTIGVRYAGQPIALIRPEEGNIFALEDRCAHRQVPLSKGHVQGQS 98
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QC YHGW Y G+C +P +L N +++ P EQ+G+I+++PGD T+
Sbjct: 99 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPVIEQDGLIFVFPGDPEKAKTV--H 155
Query: 333 LPPSGFEIH------AEIVMELPIEHGLLLDNLLDLAH 364
LP + + E+ + + +NL+D+ H
Sbjct: 156 LPATLARVDDPAYKTRRFGQEVGCHYSFMHENLMDMNH 193
>gi|218438222|ref|YP_002376551.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218170950|gb|ACK69683.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 149/359 (41%), Gaps = 48/359 (13%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS 270
T L+NFW+ + L +V EP +I R DG +++ C HR PL G
Sbjct: 2 TTLLRNFWYVAMPANKLTAGQLVGKKMLGEPILIGRKADGEVFAMRDICPHRGIPLRHGW 61
Query: 271 VNEGRIQCPYHGWEYST-DGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDE 323
+ + C YHGW++ T DG C ++PS + +++ + PC E +G IW++ E
Sbjct: 62 IEGDGVCCCYHGWKFKTKDGCCSEIPSLTEYDKLDIGRIQVTTYPCREIQGHIWVYIASE 121
Query: 324 PPTATIPCLLPP---------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
P LPP + +I ++ ++ L+D AH P+ H + +
Sbjct: 122 GKRNIDPAELPPVPTVPDFGKTAPQIAETSHFACDVDQAVI--GLMDPAHGPYVHRAWWW 179
Query: 375 KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR----- 429
+ VK + ++P P+ P M +S +KP KL G
Sbjct: 180 RSGPRKFRVK--------EKLYEPVPMGFRLAPYEMPVS----AKPYKLLGNKVSIEIVF 227
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMS-LD------FASVLKHVPFM---QYLWRHFAEQ 479
Q T ++ L R K LL ++ +D S+ +P++ + + R+ +
Sbjct: 228 QLPTVRQEI---LRGDRHKACLLTAITPIDENQCEVHQSIYWTIPWLGIVKPIMRYLTIE 284
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQTR 538
LN+D +V+ QQE + ++ + + + L R+ + PF P++ +
Sbjct: 285 FLNQDRDVVIKQQEGLAYNPSLMLIDDADTQAKWYFSLKREYERSQQENRPFNNPVEAK 343
>gi|170690827|ref|ZP_02881993.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144076|gb|EDT12238.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 402
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 48 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 107
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PGD
Sbjct: 108 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGD 156
>gi|170722290|ref|YP_001749978.1| vanillate monooxygenase [Pseudomonas putida W619]
gi|169760293|gb|ACA73609.1| Vanillate monooxygenase [Pseudomonas putida W619]
Length = 358
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 206 PVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACP 265
P +P L N W+ A +LKD V + V+FR DG ++N C HRA P
Sbjct: 15 PAKPSTFPL-NQWYVAALGWELKDRP-VGRTLLNKSVVMFRTADGKVAALENRCCHRALP 72
Query: 266 LHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE 323
L G++ G ++C YHG ++ +GKC ++P K+ + E++ ++WIW
Sbjct: 73 LSDGTLEAGGLRCGYHGLLFNDEGKCIEIPGQDKIPSKAKVAAFHVVEKDQIVWIWFAS- 131
Query: 324 PPTATIPCLLPPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
P P PPS ++IH+ V + L+ DNL+DL+H + H T
Sbjct: 132 -PEHPEPTTEPPS-YDIHSSGDYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLRTIGGN 189
Query: 377 WSV 379
S+
Sbjct: 190 ASI 192
>gi|33603264|ref|NP_890824.1| iron-sulfur protein [Bordetella bronchiseptica RB50]
gi|412341407|ref|YP_006970162.1| iron-sulfur protein [Bordetella bronchiseptica 253]
gi|427816274|ref|ZP_18983338.1| iron-sulphur protein [Bordetella bronchiseptica 1289]
gi|33577388|emb|CAE34653.1| iron-sulphur protein [Bordetella bronchiseptica RB50]
gi|408771241|emb|CCJ56041.1| iron-sulphur protein [Bordetella bronchiseptica 253]
gi|410567274|emb|CCN24845.1| iron-sulphur protein [Bordetella bronchiseptica 1289]
Length = 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGEDLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDE 323
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 375
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 376 GWSVPSLVKFLTPASGL 392
W + F+ +G+
Sbjct: 210 AWGELPEMDFVPTPTGM 226
>gi|410421746|ref|YP_006902195.1| iron-sulfur protein [Bordetella bronchiseptica MO149]
gi|427819786|ref|ZP_18986849.1| iron-sulphur protein [Bordetella bronchiseptica D445]
gi|427825215|ref|ZP_18992277.1| iron-sulphur protein [Bordetella bronchiseptica Bbr77]
gi|408449041|emb|CCJ60727.1| iron-sulphur protein [Bordetella bronchiseptica MO149]
gi|410570786|emb|CCN18984.1| iron-sulphur protein [Bordetella bronchiseptica D445]
gi|410590480|emb|CCN05569.1| iron-sulphur protein [Bordetella bronchiseptica Bbr77]
Length = 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGEDLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDE 323
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 375
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 376 GWSVPSLVKFLTPASGL 392
W + F+ +G+
Sbjct: 210 AWGELPEMDFVPTPTGM 226
>gi|410686798|ref|YP_006963105.1| putative vanillate O-demethylase oxygenase chain A [Variovorax sp.
DB1]
gi|388482519|gb|AFK33042.1| putative vanillate O-demethylase oxygenase chain A [Variovorax sp.
DB1]
Length = 358
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KNFW+ A ++ ++ E+P V FR DG + + C+HR L LG +
Sbjct: 4 KNFWYVGAMKHEVGRH-LLARTLLEQPIVFFRRIDGSVAALADRCSHRRISLSLGRLIGD 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLR---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+QC YHG ++ DG C +P Q R + ++S P E++ +W WPGD PT
Sbjct: 63 EVQCGYHGLSFAGDGSCTGIPG-QARVPPSACVRSYPVVERDEFVWFWPGD--PTLADEA 119
Query: 332 LLPPSGFEIHAEIVMELPIEHGLL-------LDNLLDLAHAPFTHTST 372
L+P + + P E L+ ++N+LDL+H + H T
Sbjct: 120 LVPDYSEICSSGRFVGRPAEPLLVEAPCLFNIENVLDLSHVTYAHQET 167
>gi|326794461|ref|YP_004312281.1| Vanillate monooxygenase [Marinomonas mediterranea MMB-1]
gi|326545225|gb|ADZ90445.1| Vanillate monooxygenase [Marinomonas mediterranea MMB-1]
Length = 372
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 29/237 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ A S ++ + + E +R K V + C HR L LG V +G
Sbjct: 8 KNAWYVAAMSEEIGLEKPLGRKVCGERIAFYRPKPNEVAAVLDFCPHRGAALSLGYVEDG 67
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRNVK-IKSLPCFEQEGMIWIWPGD--EPPTATIPC 331
+ C YHG + DGK + MP +++ +K+ E G IW+WPGD + + IP
Sbjct: 68 LLVCGYHGLKIGEDGKTKAMPLQRVQGFPCMKAYAVEELYGFIWVWPGDQSQADASLIPR 127
Query: 332 L-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK------ 384
L S + + + ++ L++DNL+DL H + H S+ + S V
Sbjct: 128 LEWAESDDWAYGGGLYHIKCDYRLMIDNLMDLTHETYVHASSIGQKEIDESPVSTQSEGD 187
Query: 385 ---------------FLTPASGLQGYWDPYPIDM----EFRPPCMVLSTIGISKPGK 422
F A G D P+D F PP V+ +G++ GK
Sbjct: 188 EVITSRYMENIMAPPFWQAALRANGLADDVPVDRWQRCRFTPPSNVMIDVGVAHAGK 244
>gi|414174881|ref|ZP_11429285.1| hypothetical protein HMPREF9695_02931 [Afipia broomeae ATCC 49717]
gi|410888710|gb|EKS36513.1| hypothetical protein HMPREF9695_02931 [Afipia broomeae ATCC 49717]
Length = 452
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ +GP P L+ +W P A +L+ + E +V+FR + G G + C
Sbjct: 10 ITRTGPADPAGKLLRMYWQPAALVDELEGPRPIRAVKLLGENFVLFRDEHGRYGLMDRDC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
HR L G + G ++C +HGW + G C + P S +N+K ++ P E+ G
Sbjct: 70 PHRGADLAFGRLENGGLRCAFHGWLFDVQGNCLETPAEPVGSVLCKNIKQRAYPVVEKGG 129
Query: 315 MIWIWPGD-EPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
++W + G+ EPP I C + P + + ++E L + +D AHA F H
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|375101692|ref|ZP_09747955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
gi|374662424|gb|EHR62302.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
Length = 377
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 129/325 (39%), Gaps = 59/325 (18%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ A+ ++ + P ++R +G + + C HR PL G +
Sbjct: 26 RNAWYVAAWDHEVTTKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKILGD 85
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN--VKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
+QCPYHG Y++ G+C MP+ + N + + P E+ +W+W G+ P P
Sbjct: 86 ELQCPYHGLRYNSTGRCTGMPAQETINPSAMVPAYPVVERYRYVWVWVGE--PDLADPAA 143
Query: 333 LPP-----------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK------ 375
+P G IHA+ + L+LDNL+DL H F H S+ +
Sbjct: 144 VPDMHQMDDPAWAGDGETIHAD------CNYQLVLDNLMDLTHEEFVHASSIGQEELSEA 197
Query: 376 -------GWSVPSLVKFL----TPASGLQGYWDPYP-----ID----MEFRPPCMVLSTI 415
G +V ++ +++ P L+ D +P +D + F P + +
Sbjct: 198 EFDVVHEGNTV-TVTRWMRDIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTICIDV 256
Query: 416 GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY----RMSLDFASVLKHVPFMQY 471
G++K G + R + + ++ P + + + LD ++ +
Sbjct: 257 GVAKAGTGAPEGDRSQGVNGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQL----- 311
Query: 472 LWRHFAEQVLNEDLRLVLGQQERMN 496
R V ED ++ QQ ++
Sbjct: 312 --RQSVHGVFAEDEDMLRAQQSAID 334
>gi|443316742|ref|ZP_21046175.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783653|gb|ELR93560.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 362
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA + ++ D +++ V+FR ++ +++ C HR L G V G
Sbjct: 28 NHWYAVARADEVTADKPRGVTLWQQKIVLFRDRNHQVQALEDRCPHRQVQLSHGEVVNGE 87
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT--- 328
++C YHGW + G C +P + +L ++ P EQ+G IW++PGDE A
Sbjct: 88 VECVYHGWRFDATGACTHVPYLGEAQKLPTCTLRRYPVREQDGFIWVFPGDEARLAAEKI 147
Query: 329 IPCLLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHA 365
P LP + V + +E + L++NL+D+ H
Sbjct: 148 EPLALPEWDHLNYIATVSLIDVESHYSFLIENLMDMYHG 186
>gi|33594581|ref|NP_882225.1| (Fe-S)-binding protein [Bordetella pertussis Tohama I]
gi|384205878|ref|YP_005591617.1| iron-sulfur protein [Bordetella pertussis CS]
gi|33564657|emb|CAE43979.1| iron-sulphur protein [Bordetella pertussis Tohama I]
gi|332383992|gb|AEE68839.1| iron-sulfur protein [Bordetella pertussis CS]
Length = 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 17/197 (8%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGENLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDE 323
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 375
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 376 GWSVPSLVKFLTPASGL 392
W + F+ +G+
Sbjct: 210 AWGELPEMDFVPTPTGM 226
>gi|347527143|ref|YP_004833890.1| putative dioxygenase [Sphingobium sp. SYK-6]
gi|345135824|dbj|BAK65433.1| putative dioxygenase [Sphingobium sp. SYK-6]
Length = 446
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQ 256
++L +GP P ++ +W P AF + P E ++ FR DG G V
Sbjct: 7 RTLTQTGPETPMGRLMRQYWIP-AFLPEETPAGGAPLRLRLLGENFLAFRSPDGSLGVVD 65
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLRN-VKIKSLPCFE 311
+ CAHR L G EG I+C YHGW++ G+C +MPS T ++ VKI++LP E
Sbjct: 66 HRCAHRCASLFYGRNEEGGIRCVYHGWKFDRTGQCIEMPSEPPETDYKHLVKIRALPVVE 125
Query: 312 QEGMIWIWPGD 322
+ G+ W++ GD
Sbjct: 126 RYGVAWVYMGD 136
>gi|218441166|ref|YP_002379495.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218173894|gb|ACK72627.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
+N W+ VA S ++K + + + VI+R + G+ ++++C HR L G++
Sbjct: 16 RNHWYVVARSCEVKAQP-ISITLWYQKIVIYRDQAGMIHALEDSCPHRLVKLSQGAIVGN 74
Query: 275 RIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDE---PPTA 327
I+C YHGW ++ +GKC +P + +L +I+S P E +G IW++PGD+ +
Sbjct: 75 EIECAYHGWRFNGEGKCTLIPYLNENQKLPPCQIRSYPVQELDGFIWVFPGDKNYLNQES 134
Query: 328 TIPCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 385
P +P I +++ P L++NL+D+ H H + W+ L
Sbjct: 135 VQPMGVPEWEHLNYIATVSIIDCPSHFSFLIENLMDMYHG---HLHDNYQAWTSAKLQNL 191
Query: 386 LTPASGLQGYWDP---YPID 402
+ + Y+D Y ID
Sbjct: 192 SVNLNRVDAYYDAQSYYTID 211
>gi|72384130|ref|YP_293484.1| phthalate 4,5-dioxygenase [Ralstonia eutropha JMP134]
gi|72123473|gb|AAZ65627.1| Phthalate 4,5-dioxygenase [Ralstonia eutropha JMP134]
Length = 437
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 200 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQN 257
+L+ GP ++ W P S+ L++ P E V FR K G G Q
Sbjct: 9 TLSRVGPGSKVGALFRSVWLPALLSSQLQEPGGSPVRLKLLGEELVAFRTKKGEVGITQA 68
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKM---PSTQL-RNVKIKSLPCFEQE 313
CAHR PL+ G V + I+C YHGW Y++ G+C +M P + VKIK+ P E+
Sbjct: 69 NCAHRLAPLYYGRVEDDGIRCNYHGWLYNSKGQCLEMQNEPDKAICSKVKIKAYPVAEKA 128
Query: 314 GMIWIW--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
++WI+ G+ P P + P + E G ++ LD +H HT+
Sbjct: 129 DIVWIYMGEGEAPELPKFPWIDLPKSQRNATVWIQESNWLQG--MEGELDSSHVSILHTN 186
>gi|170750020|ref|YP_001756280.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
radiotolerans JCM 2831]
gi|170656542|gb|ACB25597.1| Rieske (2Fe-2S) domain protein [Methylobacterium radiotolerans JCM
2831]
Length = 377
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 147/386 (38%), Gaps = 46/386 (11%)
Query: 182 PSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKD----DTMVPFDC 237
P +++ +L+ PR + + L N W+ V S L +
Sbjct: 5 PRSARTALNAPFANPPRPADEAALDPDAMRQPLGNAWYCVGQSRSLGRAGGRSALRAVAL 64
Query: 238 FEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS- 296
E V+ R DG P +++ C HR L G + + CP+HGW + TDG+C +P+
Sbjct: 65 NGEQIVLGRAPDGTPFALRDRCPHRGMALSKGRFDGDTLMCPFHGWRFGTDGRCRDVPTL 124
Query: 297 -----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIE 351
++++ P E G +W+ P P +P +P FE +V+EL +E
Sbjct: 125 SEHDAADFSRIQVQRFPVRESAGFLWVNPHLGPAAGAVPE-VPALDFEPAGFLVVELEVE 183
Query: 352 HGLLLD--NLLDLAHAPFTHTS-TFAKGWSVPSLVKFLTP--------------ASGLQG 394
L +L+D H F H S F + VK P +S +
Sbjct: 184 ASFDLTTLSLVDPGHVAFVHDSWWFRPSKQLREKVKTFQPVPHGFVMTSHATTTSSPVYR 243
Query: 395 YWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLY 453
P +++EFR P + L I R + P + +T L
Sbjct: 244 LLGGIPEVEIEFRLPGVRLERI-------------RAGEKRVANYTFATPLTPDRTLLTN 290
Query: 454 RMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGV 513
+ ++ P + L R F L +D +++ Q+ ++ + G
Sbjct: 291 ALYWSMPALNLLKPVARPLMRQF----LTQDQQVLQHAQDGLDRKPTMVLFGQGDLPSQW 346
Query: 514 RYRLWRDALEKGAKQLPFMKPMQTRK 539
+RL R+ALE PF+ P++ R+
Sbjct: 347 YFRLKREALESARDGRPFVNPLERRE 372
>gi|312174201|emb|CBX82454.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ATCC BAA-2158]
Length = 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 32/303 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL +W PVA + D+ V +EP VI+R DG ++ C HR PL LG +
Sbjct: 20 RLAGYWHPVALAADIGQ-APVKAVLLDEPLVIYR-IDGQVVVARDVCPHRGVPLTLGFHD 77
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWI----WPGDEP 324
+ I CPYHG + G+C ++PS+ + + K + E+ G+IW+ G P
Sbjct: 78 QAGIICPYHGLRFGEGGRCNRIPSSPEQAIPAKLHLLTYASEERYGLIWVCLAAAEGAVP 137
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSL 382
P +P +GF+ ++ G ++ LD+AH + HT TF A+ +VP
Sbjct: 138 PLPVMPH-WEDAGFQQIVCPHFDVAGFAGRQVEGFLDVAHFAWIHTETFADAENQAVPPY 196
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ-- 437
TP YW Y D E + P + ++ T H Q
Sbjct: 197 NPVETPYGFSVDYWSSVSNYSADSERQAP----EGFQWLRHFEMHLPFTATLTIHFPQQE 252
Query: 438 ----LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ- 492
++ P S +KTRL ++ +F H+P + F +V ED +V Q+
Sbjct: 253 KLVIMNAASPVSARKTRLFAPIARNFD---LHIPPEEV--HAFNHRVFEEDRLMVESQRP 307
Query: 493 ERM 495
ER+
Sbjct: 308 ERL 310
>gi|386399158|ref|ZP_10083936.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
gi|385739784|gb|EIG59980.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
Length = 445
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 113/275 (41%), Gaps = 44/275 (16%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQ 256
K L SGP L+ FW PV S +L + P E + FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSEELPELDGEPKKIIVLGEELLAFRDTRGVVGLID 67
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 311
C HR L LG E I+C YHGW++ TDG+C MP++ ++IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLIRIKSYPARE 127
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 359
MIW + G +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMGPADAMPELPDL----------EMAL-LPASHRYVSKKWQDCNWVQALEGS 176
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 412
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHAAGL 235
Query: 413 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 445
+ G G+L G++ + A L H PS+
Sbjct: 236 TIAG----GRLTGRDDIYWRIAQFLMPFHAYAPSA 266
>gi|408527957|emb|CCK26131.1| alpha-subunit oxygenase [Streptomyces davawensis JCM 4913]
Length = 356
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 50/287 (17%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGK-DGIPGCVQNTCAHRACPLHLG--SV 271
+N W+ A+S ++ + + EP V +R + DG + + C HR PL +
Sbjct: 9 RNQWYVAAYSHEVGRE-LFGRRVLGEPLVFYRTEGDGTVIALNDRCVHRRYPLSEAPTRL 67
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATI 329
+ R+ C YHG+ Y T G C +P + R +I S P EQ+ ++W+W GD P
Sbjct: 68 DGDRVVCGYHGFTYDTTGTCVYVPGQKRIPRTARIASYPVVEQDSLVWVWIGD--PDLAD 125
Query: 330 PCLLP-------PSGFEIHAEIVME-LPIEHGLLLDNLLDLAHAPFTH------------ 369
P +P P + ME + ++GLL+DNLLDL+H + H
Sbjct: 126 PRSIPRARHLDSPGWVTVRG---MEPIACDYGLLVDNLLDLSHETYLHGGYIGTPEVAET 182
Query: 370 --TSTFAKGWSVPSLVK---------FLTPASGLQG---YWDPYPIDMEFRPPCMVLSTI 415
T+ +G + + + F ++G++G W D+E+ PC+ L
Sbjct: 183 PITTEVDEGAGIVRVSRHMDDAECPPFYAKSTGIEGRIMRWQ----DIEYHAPCLYLLHS 238
Query: 416 GISKPGKL-EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFAS 461
++ G + E + H + PS + + +S D+A+
Sbjct: 239 RVAPVGVVPEVDGSDPGGFHTEITYAITPSGDGEVYDFWAVSRDWAT 285
>gi|60326839|gb|AAX18934.1| isophthalate dioxygenase oxygenase component [Comamonas
testosteroni]
Length = 424
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
++L GP L+ +W P S+++ D V E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 314
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 315 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 369
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|292490010|ref|YP_003532902.1| vanillate O-demethylase oxygenase [Erwinia amylovora CFBP1430]
gi|292901031|ref|YP_003540400.1| (2Fe-2S)-binding protein [Erwinia amylovora ATCC 49946]
gi|428786997|ref|ZP_19004473.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ACW56400]
gi|291200879|emb|CBJ48014.1| putative (2Fe-2S) protein [Erwinia amylovora ATCC 49946]
gi|291555449|emb|CBA23914.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora CFBP1430]
gi|426274464|gb|EKV52206.1| putative vanillate O-demethylase oxygenase subunit [Erwinia
amylovora ACW56400]
Length = 344
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 130/303 (42%), Gaps = 32/303 (10%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL +W PVA + D+ V +EP VI+R DG ++ C HR PL LG +
Sbjct: 20 RLAGYWHPVALAADIGQ-APVKAVLLDEPLVIYR-IDGQVVVARDVCPHRGVPLTLGFHD 77
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----SLPCFEQEGMIWI----WPGDEP 324
+ I CPYHG + G+C ++PS+ + + K + E+ G+IW+ G P
Sbjct: 78 QAGIICPYHGLRFGEGGRCNRIPSSPEQAIPAKLHLLTYASEERYGLIWVCLAAAEGAVP 137
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSL 382
P +P +GF+ ++ G ++ LD+AH + HT TF A+ +VP
Sbjct: 138 PLPVMPH-WEDAGFQQIVCPHFDVAGFAGRQVEGFLDVAHFAWIHTETFADAENQAVPPY 196
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQ-- 437
TP YW Y D E + P + ++ T H Q
Sbjct: 197 NPVETPYGFSVDYWSSVSNYSADSERQAP----EGFQWLRHFEMHLPFTATLTIHFPQQE 252
Query: 438 ----LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQ- 492
++ P S +KTRL ++ +F H+P + F +V ED +V Q+
Sbjct: 253 KLVIMNAASPVSARKTRLFAPIARNFD---LHIPPEEV--HAFNHRVFEEDRLMVESQRP 307
Query: 493 ERM 495
ER+
Sbjct: 308 ERL 310
>gi|428310783|ref|YP_007121760.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428252395|gb|AFZ18354.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 340
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ ++FW+ +A S L + ++ E IFR ++G +++ C HR L G V
Sbjct: 2 KFEDFWYIIALSKQLPPNKILQRTLLGEWLAIFRDENGKAVALRDRCMHRNSRLSCGKVR 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQ-----LRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+G+IQCPYHGW Y GK +PS L ++KS EQ+G I++ D
Sbjct: 62 QGKIQCPYHGWIYDNTGKIMAVPSEGKDFQPLSTRQVKSYQTKEQDGYIYVQLSDNKSEE 121
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P +P G+E ++ +N +D+ H F H F
Sbjct: 122 FAPFAMPYYQEPGWET-VRVINRFRNNVTNCAENFIDIPHTAFVHPGVF 169
>gi|398826214|ref|ZP_10584473.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
gi|398221647|gb|EJN08051.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
YR681]
Length = 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ +GP P ++++W P A +L+ + + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGERPIRPVKLLGENLVLFRDETGRYGLIDRHC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKESKLCQNIRQRSYPVVEKSG 129
Query: 315 MIWIWPGD-EPPT-ATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
++W + G+ EPP + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 369 H 369
H
Sbjct: 184 H 184
>gi|434404042|ref|YP_007146927.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428258297|gb|AFZ24247.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 340
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ +FW+ VA S L+ + ++ E IFRG+DG +++ C HR+ L G V
Sbjct: 2 QFADFWYIVALSDHLQPNKVLARSLLGEWLAIFRGEDGQAVALRDRCLHRSSRLSAGKVC 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS-------TQLRNVKIKSLPCFEQEGMIWIWPGDEPP 325
+G +QCPYHGW Y +G +PS +Q R + K P EQ+G +++ + P
Sbjct: 62 DGALQCPYHGWIYDRNGTVIAVPSEGDSFKPSQQR--QAKHYPTREQDGYVYVRLAETPS 119
Query: 326 TATIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
P +P G+E ++ +N +D+ H F H F
Sbjct: 120 VDLEPFAMPHYQERGWET-VRVINRFANNVTNCAENFIDIPHTAFVHPGVF 169
>gi|443311426|ref|ZP_21041054.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442778464|gb|ELR88729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 354
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N+W+ V ++ +LK ++P + I+R ++G +++ C H+ LH G V
Sbjct: 25 NYWYAVGWADELKIGEIMPVVIWSRAIAIYRDQNGQIHALEDACPHKGVQLHRGKVTGCN 84
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+ C YHGWE++ DG C +P + +L + ++ P E+ +IWI+PGD P A
Sbjct: 85 LACGYHGWEFNGDGDCVNIPYLPKTQKLPRAQARNYPVEEKYNLIWIFPGD-PALANTSD 143
Query: 332 LLPPSGFEIHAEIVMELPI------EHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKF 385
L P+ E+ + + +P+ + +N +D+ H F H +GW P L+
Sbjct: 144 L--PNIPELTQKEWLVVPLSARFQAHFSICNENTMDVFHG-FLHQKL--QGWFDPVLINL 198
>gi|316932512|ref|YP_004107494.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
gi|315600226|gb|ADU42761.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
Length = 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L+ + + P E V+F+ ++G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDENGRYGLIDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DG C P+ + +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGNCTDTPAEPVGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 319 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFVAPDSHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|226363504|ref|YP_002781286.1| vanillate demethylase oxygenase subunit [Rhodococcus opacus B4]
gi|226241993|dbj|BAH52341.1| putative vanillate demethylase oxygenase subunit [Rhodococcus
opacus B4]
Length = 355
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 144/344 (41%), Gaps = 45/344 (13%)
Query: 211 NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLG- 269
+T +N W+ A+ ++ + C EEP + +R + G + + C HR PL
Sbjct: 2 STIARNQWYVAAYGREVGRELFSRTIC-EEPILFWRTEAGEAVAMSDRCVHRRYPLSEAP 60
Query: 270 -SVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPP 325
++ + C YHG+ Y +DG C +P + R +++ EQ+ +W+W D + P
Sbjct: 61 SRLDGDTVVCGYHGFTYGSDGGCVFVPGQKRVPRTARLRQYQVVEQDSFVWVWIADPDNP 120
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIE-----HGLLLDNLLDLAHAPFTH----------- 369
P +P + + + + +E +GLL+DNL+DL+H + H
Sbjct: 121 EQGDPTRIPRAPWMDSPDYTVVSGMEPIDCNYGLLVDNLMDLSHETYLHGGYIGTPEVAE 180
Query: 370 ---TSTFAKGWSVPSLVK---------FLTPASGLQGYWDPYPIDMEFRPPCMVL----- 412
T+ + +V + + F + ++G++G + D+E+ PPC+ L
Sbjct: 181 TPITTEIDEDRNVIYVSRHMDDAECPPFYSKSTGIEGRITRWQ-DIEYTPPCLYLLHSRI 239
Query: 413 STIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYL 472
+ IG PG T A H ++ PS+ T + ++ DFA L +L
Sbjct: 240 APIGAPLPGD---DGTDPHAFHSEIVYAITPSTENSTLDFWAVARDFA--LGDDAVTTFL 294
Query: 473 WRHFAEQVLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
+ V+ + + L + QQ L + D G+ R
Sbjct: 295 AENNRTVVMQDVVALNILQQALDTEQDGYQELSINIDAGGLGAR 338
>gi|418528828|ref|ZP_13094770.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
gi|371454089|gb|EHN67099.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
Length = 324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ W PVA S+D+ PF E+P V++R +G+ + C HR L +G V
Sbjct: 4 RTLWHPVAQSSDV---VSAPFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVE 60
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
G ++CPYHGW++S+ G+C K+P+ T + ++++ E G+IW+ EP +
Sbjct: 61 NGHLECPYHGWQFSSGGQCVKVPAVPDFTPPASQRVQAFEVQEAYGLIWV--RLEPSDSQ 118
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHTSTFAKGW 377
+P + + H V P + +++N LD++H F H +GW
Sbjct: 119 LPVFAAET--DEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVH-----EGW 164
>gi|226505578|ref|NP_001147604.1| LOC100281213 [Zea mays]
gi|195612454|gb|ACG28057.1| pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 257 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSL 307
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 308 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 358
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 359 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 403
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 404 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 463
+F PC T P EGQ + A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGT-----PFVQEGQKKK--APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 464 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 518
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 351 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 409
>gi|148557174|ref|YP_001264756.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502364|gb|ABQ70618.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 362
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--R 300
V++R + G + + C HR PL G + R++C YHG+E+ DG+C +PS +
Sbjct: 49 VLYRTEAGEVAALPDRCPHRFMPLSQGWLIGDRLRCAYHGFEFGPDGRCAHIPSQGVVPG 108
Query: 301 NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPS----GFEIHAEIVMELPIEHGLLL 356
++I+ P E +WIWPGD P P LLPP G++ + L
Sbjct: 109 TMRIRPYPVVEHGLWVWIWPGD--PELADPALLPPDYSRPGYDSFVHFQASVKCHFLKLQ 166
Query: 357 DNLLDLAHAPFTHTSTFAKG 376
+NLLD H F H F G
Sbjct: 167 ENLLDSTHPTFLHEGMFDDG 186
>gi|374288505|ref|YP_005035590.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
gi|301167046|emb|CBW26625.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
Length = 345
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 7/168 (4%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
KNFW+ S +L + ++ +E +FRG DG P +Q+ C HR L G V
Sbjct: 8 NFKNFWYIACESKELGKNQVLARTILDEWIALFRGDDGAPVALQDRCIHRNSQLSKGWVK 67
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKI-----KSLPCFEQEGMIWIWPGDEPPTA 327
+G++QC YHGW + GK +PS K+ KS C EQ+G I+I
Sbjct: 68 DGQLQCSYHGWTFDKVGKLTGIPSEGPNQKKVGSRCAKSYECIEQDGFIFIRLEKNENLD 127
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 373
P +P G + + + ++ ++ +N +D+ H F H F
Sbjct: 128 IPPHRMPHYGEKGWQTVRLFNVFKNSVINCAENYIDVPHTVFVHDKIF 175
>gi|146343428|ref|YP_001208476.1| dioxygenase phtalate dioxygenase oxygenase subunit [Bradyrhizobium
sp. ORS 278]
gi|146196234|emb|CAL80261.1| putative dioxygenase; putative phtalate dioxygenase oxygenase
subunit [Bradyrhizobium sp. ORS 278]
Length = 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L + V + +V+F+ + G G + C HR
Sbjct: 14 GPDAPAGKLMRMYWQPAALVDELAGERPVRAVKLLGQDFVLFKDEQGRYGLLDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DG C + P S +NVK +S P E+ G++W
Sbjct: 74 ADLAFGRLEHGGLRCAFHGWLFDVDGACLETPAEPAGSPLCKNVKQRSYPVVEKGGILWA 133
Query: 319 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
W G+ P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGEGAAPAFPDLDCFTAPDAYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|443317166|ref|ZP_21046585.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783241|gb|ELR93162.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 351
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ S DLK M EP ++ R + G +++ C HRA PL G +
Sbjct: 10 LRNIWYHALPSRDLKPGQMRSKTLLNEPILLGRTQRGQAFALRDICPHRAVPLSCGRFDG 69
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD----- 322
++C YHGW + +G C ++PS L ++ E +G +WI+ D
Sbjct: 70 ESVECCYHGWRFGPNGSCLQIPSLMADQTLDLSKFDVRRYDVQEVQGNVWIYMADPNPQQ 129
Query: 323 -EPPTATIPCLLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
PP +P +P + +I +P ++H ++ L+D AH+PF H + + +G
Sbjct: 130 VHPPRFEVP-RIPGFPEDAQPQISYTMPFSCFVDHAVV--GLMDPAHSPFVHRAWWWRGG 186
Query: 378 SVPSLVKFLTPA 389
++ +K+ P+
Sbjct: 187 NLNPEIKWFDPS 198
>gi|434389375|ref|YP_007099986.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428020365|gb|AFY96459.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 363
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 124/305 (40%), Gaps = 41/305 (13%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+N W+ + +K M+ EP V R + G +++ C HRA PL G +
Sbjct: 22 LRNIWYYALPAERIKAGQMLAKQLLGEPVVFGRTQAGEVFALRDICPHRAVPLSCGRFDG 81
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIWPGD----- 322
I+C YHGW + G C +P+ L +++ P E +G IWI+ D
Sbjct: 82 KEIECAYHGWRFDDGGTCTAIPALNDDRDLDLSKFQVRRYPVREVQGNIWIYMSDLDRCD 141
Query: 323 -EPPTATIPCLLPPSGFEIHAEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
P T+P + G + M+ P I+H ++ L+D +H PF H + + W
Sbjct: 142 EREPQQTVPEIAGFEGVTHQSTFTMKFPCFIDHAVV--GLMDPSHVPFVHRAWW---WRS 196
Query: 380 PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPG---------KLEGQNTRQ 430
+++ A +DP P R + T G +L G Q
Sbjct: 197 DTILTDEIKA------FDPSPYGFTMRRHRLERQTFFYRLLGGDAEVEIAFRLPGVRIEQ 250
Query: 431 CATHLHQ---LHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
T+ ++ L V P S +T + + F + + +++L + F L +D +
Sbjct: 251 IVTNTNRVCNLTVITPISETETEV----TTMFYTTIPWFKPLRWLIQPFITTFLGQDRDM 306
Query: 488 VLGQQ 492
V+ QQ
Sbjct: 307 VVKQQ 311
>gi|408414289|ref|YP_006624996.1| iron-sulfur protein [Bordetella pertussis 18323]
gi|401776459|emb|CCJ61651.1| iron-sulphur protein [Bordetella pertussis 18323]
Length = 453
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 18/196 (9%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P L+ FW PVA S +L + F E V+FR ++G PG ++ C+HR L
Sbjct: 34 PMGEYLRRFWQPVALSEELGE-LPTAVRMFGENLVLFRARNGKPGLLEKHCSHRGTSLEF 92
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWIWPGDE 323
G E ++C YHGW + DG+ + P +QLR NV + P E G+I+ + G
Sbjct: 93 GICEENGLRCCYHGWLFGVDGQILETPGDPPDSQLRFNVCHGAYPLHEYRGIIFGYFG-- 150
Query: 324 PPTATIPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHT----STFAK 375
P A P ++I + ++ I + + +N++D AHA F HT + FA+
Sbjct: 151 -PPADKPEFPVYDTYDIPGDRLVPYCITYPCNWLQVHENVMDPAHAVFLHTRISFTQFAE 209
Query: 376 GWS-VPSLVKFLTPAS 390
W +P + TP S
Sbjct: 210 AWGELPEMDFVPTPTS 225
>gi|374578640|ref|ZP_09651736.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM471]
gi|374426961|gb|EHR06494.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM471]
Length = 445
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 112/275 (40%), Gaps = 44/275 (16%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQ 256
K L SGP L+ FW PV S +L + P E + FR G+ G +
Sbjct: 8 KFLTESGPGTGMGELLRRFWIPVLLSEELPELDGEPKKIIVLGEELLAFRDTRGVVGLID 67
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST-----QLRNVKIKSLPCFE 311
C HR L LG E I+C YHGW++ TDG+C MP++ V+IKS P E
Sbjct: 68 QYCPHRGANLWLGRNEECGIRCVYHGWKFDTDGRCVDMPTSYPDLNAKDLVRIKSYPARE 127
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL------------LDNL 359
MIW + G +P L E+ + LP H + L+
Sbjct: 128 WGEMIWAYMGPADAMPELPDL----------EMAL-LPASHRYVGKKWQDCNWVQALEGS 176
Query: 360 LDLAHAPFTHTSTFAKGWSVPSLVK-FLTPASGLQG---YW---DPYPIDMEFRPPCMVL 412
+D AH F H S + + + K F+ P + + W DP P+ ++ P L
Sbjct: 177 IDTAHFTFAHLSFDKEENEILDIKKHFVNPIARMSSDHMRWIAEDPRPV-IKIAPHAAGL 235
Query: 413 STIGISKPGKLEGQNTR--QCATHLHQLHVCLPSS 445
+ G G+L G + + A L H PS+
Sbjct: 236 TIAG----GRLTGGDNIYWRIAQFLMPFHAYAPSA 266
>gi|414873470|tpg|DAA52027.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 257 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSL 307
+ C HR PL G +++ GR+QC YHGW + G C+ +P + S
Sbjct: 122 DACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVASY 181
Query: 308 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 358
PC Q ++W +P +P + + P L+P P ++ + +LP + +L++N
Sbjct: 182 PCVVQNNILWFYPRADPEHSDVLQRKRPPLIPEIDDPDFVTVYG--IRDLPYGYDILVEN 239
Query: 359 LLDLAHAPFTHTST--------------FAKGWSVPSLVKFLTPASGLQGYWDPYPID-M 403
L+D AH P+ H + K P VK + ++G+ P
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDYDKEGGGP--VKMKIEQANIEGFVSPQERGYF 297
Query: 404 EFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVL 463
+F PC T P EGQ + A + + C+P ++R+++ + L
Sbjct: 298 QFVAPCTFFGT-----PFVQEGQKKK--APRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 464 KHVPFMQYLWRHFAEQVLNEDLRLVLGQQER-----MNNGANVWNLPVGYDKLGVRYRLW 518
H+ ++L+ +L+ D+ L+ ++ + ++N +P D + V +R W
Sbjct: 351 HHIT-PRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPTSSDAMVVAFRNW 409
>gi|421870166|ref|ZP_16301803.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|358070773|emb|CCE52681.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
Length = 371
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G ++++CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDSCAHRQVPLHAGVVSGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLAEA 147
Query: 333 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|238858999|dbj|BAH70269.1| oxygenase component of isophthalate dioxygenase [Comamonas sp. E6]
Length = 424
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
++L GP L+ +W P S+++ D V E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 314
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 315 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 369
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|221065631|ref|ZP_03541736.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220710654|gb|EED66022.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ W PVA S+D+ PF E+P V++R +G+ + C HR L +G V
Sbjct: 4 RTLWHPVAQSSDV---VSAPFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVE 60
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
G ++CPYHGW++S+ G+C K+P+ T + ++++ E G+IW+ EP +
Sbjct: 61 NGHLECPYHGWQFSSGGQCVKVPAVPDFTPPASQRVQAFEVQEAYGLIWV--RLEPSDSQ 118
Query: 329 IPCLLPPSGFEIHAEIV----MELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
+P + + H V ++ +++N LD++H F H +GW
Sbjct: 119 LPVFAAET--DQHLRKVNCGSYDVAASAPRIIENFLDMSHFGFVH-----EGW 164
>gi|456352367|dbj|BAM86812.1| putative dioxygenase [Agromonas oligotrophica S58]
Length = 452
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A + +L + V + +V+F+ + G G + C HR
Sbjct: 14 GPTAPAGKLMRMYWQPAALADELVGERPVRAVKLLGQHFVLFKDEQGRYGLLDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + +G ++C +HGW + +G+C + P S +N++ +S P E+ G++W
Sbjct: 74 ADLAFGRLEQGGLRCSFHGWLFDVEGQCLETPAEPPGSPLCKNIRQRSYPVVEKGGILWA 133
Query: 319 WPGD--EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
W GD P + C P + + ++E L + +D AHA F H
Sbjct: 134 WLGDGAAPAFPDLDCFTAPDTYTFAFKGLIECNWLQALEVG--IDPAHASFLH 184
>gi|423435967|ref|ZP_17412948.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
gi|401123450|gb|EJQ31226.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
Length = 315
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 41/324 (12%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ V+++ D+K V + +V++R + G + C HR L LG V G++
Sbjct: 13 WYAVSYAKDIKK-IPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 278 CPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDE--PPTATIPC 331
CPYHGWE+ + G C ++PS + + S P E+ G+IWI+P E PP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQPNKPIPKFAHTSSYPVKEKIGLIWIYPDSEETPPEWKTFH 131
Query: 332 LLPPSGFEI---HAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTP 388
++ + F++ HA L ++++LD+AH + H T + K +
Sbjct: 132 VMENTPFKLSFFHATWNAHLTRS----IESVLDIAHLAYVHKKTIGRK------TKAEST 181
Query: 389 ASGLQGYWDPYPID-----MEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLP 443
L+G D + +E++ P + GK E ++ Q T P
Sbjct: 182 NYKLEGTLDQFIFSNGNAYLEYKFPHQWM-----LHSGKQENESFIQYIT-------FTP 229
Query: 444 SSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANVWN 503
++T + M + LK+ P + L F+ +VL ED +V Q R A
Sbjct: 230 IDEEETLI---MGYTGRTFLKYFPLLDLLLAKFSLRVLKEDQIIVESQHPRPIPEALKME 286
Query: 504 LPVGYDKLGVRYR-LWRDALEKGA 526
V D V++R W L+ G+
Sbjct: 287 AHVHADMAQVQFRKRWFQFLQNGS 310
>gi|167590452|ref|ZP_02382840.1| Rieske (2Fe-2S) domain protein [Burkholderia ubonensis Bu]
Length = 371
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S ++K + +P V+ R G +++ CAHR PLH G V
Sbjct: 31 DHWYPLAWSREVKRGGTLGVRFAGDPIVLVRTASGAVFALEDRCAHRQVPLHAGVVTGES 90
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
I+C YHGW Y G+C +P + +++ PC E G+I+++PGD P
Sbjct: 91 IRCCYHGWTYDCTGRCIDVPYLGRERLPNGVRAYPCREVHGLIFVFPGDAALAGERPLPE 150
Query: 334 PPSGFEIHAE---IVMELPIEHGLLLDNLLDLAH 364
PS + + E+ + + +NL+D+ H
Sbjct: 151 LPSAEDSAYKTRRFGREVKCHYSFMHENLMDMNH 184
>gi|123966007|ref|YP_001011088.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9515]
gi|123200373|gb|ABM71981.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9515]
Length = 439
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 34/304 (11%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ + S LK + + F F+EP ++FR C++N C HR + GS++ G +
Sbjct: 48 WYAICPSNVLKKNKIHYFSLFDEPLLLFRDNKNNVRCIKNICPHRGASFYGGSISNGELT 107
Query: 278 CPYHGWEYSTDGKCEKMPSTQLRN------------VKIKSLPCFEQEGMIWIWPGD--- 322
CPYHG +S++G C+ + S R+ + + E++ I+I+ D
Sbjct: 108 CPYHGARFSSEGNCQNIDSITCRHIVDNNYDNYAKRIHLSQYKTVEEDNYIFIYFSDKSE 167
Query: 323 --------EPPTATIPCLLPPSGFEIH----AEIVMELPIEHGLLLDNLLDLAHAPFTHT 370
EP + L +GF I E++++ + +++N LD+ H + H
Sbjct: 168 MDLNNIKEEPSISNYE--LISNGFSIEDSVSEEVLVDFKCDWSRIIENHLDILHIFWVHG 225
Query: 371 STF-AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
T K + LV F + Y + I + P I PG++
Sbjct: 226 DTIPDKEVNKNVLVSFNQKININPNYIE--SIYFYKKNPTKEFIRIKYIPPGRILIYKGD 283
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMSLDF--ASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
+ Q+ +P K R++ R F +L ++ + + ++ NED +
Sbjct: 284 PAVSRYVQVLDHIPLGENKARVIVRHYRKFLKNKLLNNLILFKENQKKIFYKIFNEDYMI 343
Query: 488 VLGQ 491
+ Q
Sbjct: 344 LKTQ 347
>gi|148557754|ref|YP_001265336.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502944|gb|ABQ71198.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 365
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 145/376 (38%), Gaps = 64/376 (17%)
Query: 192 VKGKLPRKSLNVSGPVQPYNTRLKNFWFPVAFS----TDLKDDTMVPFDCFEEPWVIFRG 247
+K R ++G P+ + N W+ F+ DLK T++ P V +R
Sbjct: 8 IKEASRRADARLAGRATPF---IFNCWYVAGFAWEFARDLKARTIL-----GRPLVFYRT 59
Query: 248 KDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIK 305
G P + + C HR+ PL ++ I C YHG Y + G C + P+ R + ++
Sbjct: 60 SAGDPVALSDRCVHRSFPLSKSQLDGDSIVCGYHGLRYDSGGACIEAPAVGECPRGIGVR 119
Query: 306 SLPCFEQEGMIWIWPGDEPPTATIPC-------LLPPSGFEIHAEIVMELPIEHGLLLDN 358
S P +Q ++WIW GD P +P P S H LP + L +N
Sbjct: 120 SYPLRQQGPLVWIWMGDAAPADELPTGSWVADEQWPASQQYYH------LPASYVALHEN 173
Query: 359 LLDLAHAPFTHTSTF------AKGWSVP--------SLVKFLTPA---------SGLQGY 395
LLDL H F H +F A ++V +L + + P +GL G
Sbjct: 174 LLDLTHLSFLHAHSFGTPDYAAAPYAVDLDEDAGRFALTRSVVPTRLPPVWAEPTGLTGK 233
Query: 396 WDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRM 455
EF P + + E + R T + H+ P + T
Sbjct: 234 DAARVTTSEFLGPSTHVVSAQFYGLDVAEAERGR---TGIRTAHLPTPETATSTHYFIHH 290
Query: 456 SLDFASVLKHVP-FMQ-YLWRHFAEQV--LNEDLRLVLGQQERMNNGANVWNLPVGYDKL 511
+FA V FMQ L F E V L E R++ E + + + + D+
Sbjct: 291 GRNFAQDDPSVTDFMQEQLTVAFTEDVVGLTEIERMIAETPED-----DRYEISLASDRP 345
Query: 512 GVRYRLW--RDALEKG 525
G+ R W R A+E+G
Sbjct: 346 GLAMRRWIYRTAMEEG 361
>gi|301072746|gb|ADK56283.1| Rieske-domain protein neverland [Spodoptera littoralis]
Length = 451
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL-GSVNEG 274
N WF VA S +LK+ ++ D + I+RG+DG+ V C H L + G+V+
Sbjct: 122 NGWFAVAESRELKNGGVLSIDALGQNLCIYRGEDGVARVVDAYCPHLGANLGIAGTVSGS 181
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDE--PPTATIP 330
I+CP+H W + +G C +P + + V IK E++G +WIW E P +P
Sbjct: 182 CIECPFHKWRFGENGACVSVPGVEHAPKGVSIKHWTTVERDGAVWIWYDAEGRDPLWIVP 241
Query: 331 CL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
L L G+ E V+ I+ + +N D+AH HT + G
Sbjct: 242 ELPELKSWGYRGRNEYVVSAHIQE--IPENGADVAHLNAVHTMSLLSG 287
>gi|221066802|ref|ZP_03542907.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220711825|gb|EED67193.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 424
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 13/180 (7%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK--DDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
++L GP L+ +W P S+++ D V E + FR DG +
Sbjct: 7 ETLTRVGPNTRMGNLLRRYWVPALMSSEIAEADGPQVRVQLLGEKLLAFRNTDGKACLIS 66
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPST--QLRNVKIKSLPCFEQEG 314
C+HR L+ G E I+C YHG ++ DG+C +PS+ + IK PC E+ G
Sbjct: 67 EFCSHRGVSLYFGRNEENGIRCAYHGVKFDGDGQCVDVPSSPQSCARMHIKGYPCVERGG 126
Query: 315 MIWIWPGDEPPTATIP----CLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTH 369
++W + G E + P C LPP H + L + L ++ +D AH + H
Sbjct: 127 IVWTYMGPEEHKPSPPELEWCTLPPE----HVFVSKRLQYSNWLQAMEGGIDTAHVSYVH 182
>gi|121608456|ref|YP_996263.1| Rieske (2Fe-2S) domain-containing protein [Verminephrobacter
eiseniae EF01-2]
gi|121553096|gb|ABM57245.1| Rieske (2Fe-2S) domain protein [Verminephrobacter eiseniae EF01-2]
Length = 343
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 126/334 (37%), Gaps = 39/334 (11%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEG 274
KN W+ VA + D + + +P V +R +++ C HR PL LG V +G
Sbjct: 4 KNAWY-VACTPDEIAEQPLGRKVCGQPIVFYRPAPDRVAALEDFCPHRGAPLSLGRVCDG 62
Query: 275 RIQCPYHGWEYSTDGKCEKMPSTQLRN-VKIKSLPCFEQEGMIWIWPGDEP---PTATIP 330
+ C YHG DG+ MP +++ + +S P E+ G IW+WPGD P +
Sbjct: 63 ELTCGYHGLRVGCDGRALSMPGQRVQGFARTRSFPVVERYGFIWVWPGDAALADPARIVH 122
Query: 331 CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH--------------------- 369
+ + ++ L++DNL+DL H + H
Sbjct: 123 LHWADNPEWAFGGGRYHIGCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPCKTHMAGD 182
Query: 370 ---TSTFAKGWSVPSLVKFLTPASGLQGYWDPYPID----MEFRPPCMVLSTIGISKPGK 422
TS F G P + +GL D P+D F PP VL +G++ G
Sbjct: 183 EVITSRFMPGIQAPPFWQMALRMNGLP---DDQPVDRWQICHFTPPSHVLIEVGVALAGL 239
Query: 423 LEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLN 482
+ + P + + M+ F P + R ++
Sbjct: 240 GGHEAAADKKVACIVVDFITPETETSIHYFWGMARHFNP---QDPTLTARIREGQGKIFA 296
Query: 483 EDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
ED +++ QQ+ + + L + D GV+ R
Sbjct: 297 EDRQMLEMQQQNLLHYPERKLLTLNIDAGGVQSR 330
>gi|295700594|ref|YP_003608487.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439807|gb|ADG18976.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 396
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 42 DYWYPLAWSHEVKRGKTLGVTFAGDPIVLARTESGKVFALEDRCAHRQVPLHQGVVDGES 101
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCLL 333
I+C YHGW Y G C +P + ++S PC E EG+++++PGD A +
Sbjct: 102 IRCGYHGWTYDCSGTCIDVPYLGRERLPNGVRSYPCQEVEGLVFVFPGD----AALAEER 157
Query: 334 PPSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P GF ++ + + + +NL+D+ H F H +
Sbjct: 158 PLPGFRSVSDPKYKTRRFGRPVKCHYSFMHENLMDMNHQ-FLHRRQMGQ 205
>gi|119491090|ref|ZP_01623248.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119453635|gb|EAW34795.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 343
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA S ++K + + +P ++FR G +++ C HR L G + G
Sbjct: 15 NHWYVVARSNEVKTQPL-GVTLWNQPIILFRDSQGKIQALEDRCPHRQVKLSHGKIIAGL 73
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
I+C YHGW+++T G+C K+P + +L N +I++ P E +G IW++ G E T T P
Sbjct: 74 IECAYHGWQFNTQGQCVKIPYLAENQKLPNCQIRNYPVQELDGFIWLFLG-ENSTQTQPL 132
Query: 332 LLPPSGFEIHAEIVMELPIEH-----GLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVK 384
+P H + + + H +++NL+D+ H H + W+ L K
Sbjct: 133 GVPEWD---HLNYIATVSLIHCQAHYSFVIENLMDMYHG---HLHQNWQAWTDAVLEK 184
>gi|398984223|ref|ZP_10690492.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399012013|ref|ZP_10714341.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398116619|gb|EJM06378.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398155922|gb|EJM44349.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 357
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ A S +LKD + +P V+FR D +++ C HRA PL G+V ++
Sbjct: 25 WYVAALSRELKDQPL-GRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSNGTVEARGLR 83
Query: 278 CPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD-EPPTATIPCLLP 334
C YHG + GKC ++P K+ + P EQ+ +IWIW G E P P P
Sbjct: 84 CGYHGLLFDDGGKCIEIPGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPQ---PTFAP 140
Query: 335 PSGFEIHAE-------IVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
P +++H+ V + L+ DNL+DL+H + H T S+
Sbjct: 141 PV-YDVHSSGKYLFDGDVYHYDAPYQLIHDNLMDLSHLGYVHLHTIGGNASI 191
>gi|374309126|ref|YP_005055556.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Granulicella
mallensis MP5ACTX8]
gi|358751136|gb|AEU34526.1| Rieske (2Fe-2S) iron-sulfur domain protein [Granulicella mallensis
MP5ACTX8]
Length = 383
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 145/351 (41%), Gaps = 38/351 (10%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+P ++ LK P ++ R DG +++ C HR PL G + +Q
Sbjct: 34 WYPALRASSLKRKDTAVTTLLGIPMLLGRKSDGALFAMRDLCPHRGIPLSAGWFDGETVQ 93
Query: 278 CPYHGWEYS-TDGKCEKMPS----TQLRNVKI--KSLPCFEQEGMIWIW-----PGDEPP 325
C YHGW + G+C+++PS L KI S P E++G W++ G
Sbjct: 94 CKYHGWRFEPCSGQCQEIPSLTSHDSLEPTKIYANSFPVVERDGYAWVYVPEAGAGRVTE 153
Query: 326 TATIPCL--LPPSGFEIH-AEIVMELP--IEHGLLLDNLLDLAHAPFTHTSTFAK-GWSV 379
AT+P + LP G A + ELP ++HG++ L+D AH PF H + + + S+
Sbjct: 154 EATLPPVPELPKFGSRFRSAHLQAELPCNVDHGII--GLMDPAHGPFVHRAWWWRSAASI 211
Query: 380 PSLVKFLTPASGLQ--GY-----WDPY-------PIDMEFRPPCMVLSTIGISKPGKLEG 425
K P L+ G+ P+ P + RP M+ + + +
Sbjct: 212 HEKTKKFEPIEDLEHDGFNAGFRMSPHAPSSNSAPYRLLGRPVTMIDFVLPNRRYETILA 271
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDL 485
+N R L P + R+ + D A HVPF+ + R+F + + +D
Sbjct: 272 ENARGKKRWFSSLTTVTPVTASTCRIDVIAAWDIA---YHVPFVTPIARYFGAKFVQQDQ 328
Query: 486 RLVLGQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPMQ 536
+ ++ Q + + + L DK Y + KG + P +P++
Sbjct: 329 QTMIEQARGLRSNPGL-MLIDDADKPAKWYFALKQRRLKGIGEHPLSEPVE 378
>gi|188579895|ref|YP_001923340.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium populi
BJ001]
gi|179343393|gb|ACB78805.1| Rieske (2Fe-2S) domain protein [Methylobacterium populi BJ001]
Length = 361
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 41/346 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ ++ + M E V+ RGKDG +++ C HR L G +
Sbjct: 24 LPNAWYCAGQASAVAGGKMRAVALNGEQVVLGRGKDGALFALRDRCPHRGMALSKGKFDG 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSEHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 384
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 EAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 385 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
P +S + P +++EFR P + L I K G T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI---KAG------TK 254
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 490 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 535
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAAREGRPFANPL 352
>gi|224056994|ref|XP_002299108.1| predicted protein [Populus trichocarpa]
gi|222846366|gb|EEE83913.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 141/362 (38%), Gaps = 71/362 (19%)
Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
W+PV DL D +V +D E W +F N C HR PL
Sbjct: 30 WYPVMPVCDLDKRAPHAKKVMGLDIVVWWDKNESSWRVF----------NNACPHRMAPL 79
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPS--------TQLRNVKIKSLPCFEQEGMIW 317
G V++ GR+QC YHGW ++ G C +P + + + P ++W
Sbjct: 80 SEGRVDQWGRLQCVYHGWCFNGSGNCNFIPQAPTDGPPVSTSKKACVAVYPSTVHHDIVW 139
Query: 318 IWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
WP +P I P +P PS +I +LP + +L++NL+D AH P+
Sbjct: 140 FWPNTDPQYKDIILKKQPPFIPELDDPSYIKITGS--RDLPYGYEVLIENLMDPAHVPYA 197
Query: 369 HTSTF--------------AKGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLST 414
H +G S L G G + I+ +F PC+ +
Sbjct: 198 HYGIMRTRQPKGILRLKADREGGSPVELSIKKLDIDGFIGNQVQFGIN-KFIAPCISYAD 256
Query: 415 I------GISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF 468
G E + + Q L + C+P S +RL++ + ++ + VP
Sbjct: 257 SSPVVDQGDDAIADTEKKPSMQRREAL--IFFCVPVSPGNSRLIWAIPKNYGVWIAKVP- 313
Query: 469 MQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRLWRDALE 523
+++ VL+ DL L+ L +++ M GA+ W +P D V +R W +
Sbjct: 314 -RFIHHSVTNIVLDSDLYLLHLEERKIMEIGASNWQKACFVPAKSDAFVVGFRKWLNKYA 372
Query: 524 KG 525
G
Sbjct: 373 GG 374
>gi|251797010|ref|YP_003011741.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus sp. JDR-2]
gi|247544636|gb|ACT01655.1| Rieske (2Fe-2S) domain protein [Paenibacillus sp. JDR-2]
Length = 325
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L++ W PVA + D+ D T E VIFR K G+ +++ C HR PL LG V+
Sbjct: 8 LEHEWHPVAIAADVSD-TPKQVIVLGEKVVIFRTKQGVKA-MKDLCIHRGVPLSLGRVDN 65
Query: 274 GRIQCPYHGWEYSTDGKC---EKMPSTQLRNVKIKSLP--CFEQEGMIWIWPGDEPPTAT 328
I C YHGW Y DG+C MP +Q +K K+ C E+ G +W+ G EP
Sbjct: 66 DEIVCAYHGWRYDGDGRCVCIPAMPKSQAIPLKAKTQTYLCLERYGFVWVCLG-EPKEE- 123
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHG---------LLLDNLLDLAHAPFTHTSTFA 374
PP ++ E+ LPI G +++N LD++H F H
Sbjct: 124 ----YPPLEGKVEEEL---LPIWMGPYPVQASAPRVIENFLDVSHLMFVHEGLLG 171
>gi|440684302|ref|YP_007159097.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
gi|428681421|gb|AFZ60187.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
Length = 354
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ S LK MV EP ++ R +DG V++ C HRA PL G N ++
Sbjct: 13 WYYALPSYLLKPGKMVARIFLGEPVLLIRSQDGQVSAVRDICPHRAVPLSCGRFNGQEVE 72
Query: 278 CPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD----EPPTA 327
C YHGW + G C +PS T L ++S P E +G IWI+ D +P +
Sbjct: 73 CCYHGWRFDPAGHCVSIPSLLPEQDTDLSRFDVQSYPIHETQGNIWIYMTDGDKSQPSAS 132
Query: 328 TIPCLLPPSGFEIHAEI--VMELP--IEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLV 383
+ + P E ++ VM P I+H + L+D AH+P+ H + + + V
Sbjct: 133 EMDVPVVPGFAEQLPQLVEVMRFPCFIDHA--VTGLMDPAHSPYVHRVWWWRSGELHEEV 190
Query: 384 KFLTPA 389
K P+
Sbjct: 191 KQFDPS 196
>gi|148555968|ref|YP_001263550.1| phthalate 4,5-dioxygenase [Sphingomonas wittichii RW1]
gi|148501158|gb|ABQ69412.1| Phthalate 4,5-dioxygenase [Sphingomonas wittichii RW1]
Length = 431
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLK-DDTMVPFDCFEEPWVIFRGKDGIPGCVQN 257
+ L G P L+ +W P+A + +D + P F E V++R K G+ G V
Sbjct: 8 RQLTRVGSGTPMGELLRRYWHPIAGVAEFDGEDRIRPVRLFGEDLVLYRDKSGVFGLVDR 67
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN--------VKIKSLPC 309
C HR L G V + ++C YHGW + DG+C + P + N ++I S P
Sbjct: 68 RCPHRRADLAYGFVEQCGLRCNYHGWRFDADGRCLEQPYEDVANPTGRFRDKIRIASYPV 127
Query: 310 FEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFT 368
+ GM+W + G P +P P S ++V+ E+P +N +D H +
Sbjct: 128 AVKAGMVWAYMGPA-PAPLLPDWEPFSWKNGFVQVVLAEIPCNWLQCQENSIDPVHFEWM 186
Query: 369 HTS 371
H +
Sbjct: 187 HMN 189
>gi|294085287|ref|YP_003552047.1| iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664862|gb|ADE39963.1| iron-sulfur protein [Candidatus Puniceispirillum marinum IMCC1322]
Length = 460
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 200 SLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTC 259
L +GP P + FWFP+ S ++ + + E V++R ++G G + C
Sbjct: 33 ELTETGPRTPGGEYWRRFWFPICLSDEVTNRPLRK-RILSEDLVVYRDQEGNCGLLHLHC 91
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
+HR L G V E ++C YHGW Y DG + P S VK + P E +G
Sbjct: 92 SHRNMSLEFGIVEERGLRCAYHGWLYDYDGTVIETPGEPKGSPICEKVKQGAYPVKEFKG 151
Query: 315 MIWIWPGDEPPTATIPCLLPPSGFEIHA-EIV---MELPIEHGLLLDNLLDLAHAPFTHT 370
+++ + G P A IP FE+ E+V + P + + +N +D H + HT
Sbjct: 152 LVFAYMG---PMAEIPPFPIYDTFELDGHELVPYRLSYPCNYLQVAENTMDPIHTVYLHT 208
Query: 371 ----STFAKGWSVPSLVKFLTPASGL 392
+ F + W + L+KF + L
Sbjct: 209 LVGETQFEESWGITPLLKFHDSDTSL 234
>gi|336176153|ref|YP_004581528.1| Rieske (2Fe-2S) domain-containing protein [Frankia symbiont of
Datisca glomerata]
gi|334857133|gb|AEH07607.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia symbiont of
Datisca glomerata]
Length = 426
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL-HLGSVNEGRI 276
W+ + DLK +VP + W +FR K G G + + C H L G V E R+
Sbjct: 33 WYFARYGEDLKPGDVVPLELMSHQWALFRTKSGKVGIIDSLCCHAGADLARSGWVTEDRL 92
Query: 277 QCPYHGWEYSTDGKCEKM---PSTQL-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
C YH WE+ TDG+C M P+ ++ + +S+P E+ G I+ W G EP A +
Sbjct: 93 ACGYHAWEFETDGRCTSMSRVPADKIPARARQRSIPVIERAGNIYFWYGPEPVRAFVDL- 151
Query: 333 LPPSGFEI--HAEIVMELPIEHG---LLLDNLLDLAHAPFTH 369
S FE + ++ I G + ++++D H P++H
Sbjct: 152 ---SHFESDRFENVKGQIYIGRGDPERISEHIVDSYHFPYSH 190
>gi|302787751|ref|XP_002975645.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
gi|300156646|gb|EFJ23274.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
Length = 547
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-GRI 276
W+PV+ DL PF V+++ +G + C HR PL G ++E G +
Sbjct: 94 WYPVSLVEDLDPKAATPFKLLGREIVVWKDGEGNWRAFSDQCPHRLAPLSEGRIDENGWL 153
Query: 277 QCPYHGWEYSTDGKCEKMPSTQLRNVKIK----------SLPCFEQEGMIWIWP---GDE 323
QC YHGW + DG C K+P + + K S P +G++++WP G E
Sbjct: 154 QCSYHGWSFKGDGSCGKIPQAATQGPESKAVASPRACAISFPAVVSQGLLFVWPDEKGWE 213
Query: 324 PPTATIPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
T P LP PS + I +L + L++N+ D +H F H K
Sbjct: 214 SAQRTQPPQLPAVFDDPSFSTV--TIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGK--- 268
Query: 379 VPSLVKFLTPASGLQGYW-------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
K LT +G W D I EF PC ++ I I L+G T
Sbjct: 269 -RDRAKPLTFKVDSRGPWGFSGANSDTPKITAEFLAPCYYINKIEIPVTLPLQGPKT 324
>gi|39934058|ref|NP_946334.1| phthalate 4,5-dioxygenase [Rhodopseudomonas palustris CGA009]
gi|39647906|emb|CAE26426.1| possible phthalate dioxygenase [Rhodopseudomonas palustris CGA009]
Length = 452
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L+ + + P E V+F+ + G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDETGRYGLIDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DGKC P S +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCIDTPAEPAGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 319 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFIAPDTHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|339021311|ref|ZP_08645415.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
tropicalis NBRC 101654]
gi|338751585|dbj|GAA08719.1| ring-hydroxylating dioxygenase ferredoxin subunit [Acetobacter
tropicalis NBRC 101654]
Length = 374
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
NFW+PVA++ ++ P P + R + G +++ CAHR PL G V
Sbjct: 36 NFWYPVAWAHKVRPGKAFPTRYAGHPIALIRPEKGPIYALEDRCAHRQVPLSKGLVEGDC 95
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIP 330
I+C YHGW + GKC +P +V +++ PC E+ G+I+I+PGD T+P
Sbjct: 96 IKCCYHGWAFDRAGKCVTVPYLNRSDVGRPVRAYPCREKAGLIFIFPGDPALAETVP 152
>gi|94314465|ref|YP_587674.1| vanillate O-demethylase oxygenase subunit (4-hydroxy-
3-methoxybenzoate demethylase) [Cupriavidus
metallidurans CH34]
gi|93358317|gb|ABF12405.1| putative vanillate O-demethylase oxygenase subunit (4-hydroxy-
3-methoxybenzoate demethylase) [Cupriavidus
metallidurans CH34]
Length = 347
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ ++++ + D +V + V +R DG +++ C HRA PL G
Sbjct: 3 LKNAWYVAGWNSEFQKDQLVSRRLLGQDIVFYRRGDGSVAALEDRCCHRAAPLSKGQQEG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
+I+C YHG ++ G+C ++P + +K++S P ++ ++WIW G +P A
Sbjct: 63 DQIRCMYHGLLFNCAGQCVEVPGQERISDKLKVRSFPTEVRDNLVWIWMG-QPELADASE 121
Query: 332 LLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ G+ + + L++DNLLD +H F H +
Sbjct: 122 IKQVHWHNREGWRVEEGGYLRYASGVQLIVDNLLDFSHLGFVHNKSIG 169
>gi|384214814|ref|YP_005605978.1| hypothetical protein BJ6T_10980 [Bradyrhizobium japonicum USDA 6]
gi|354953711|dbj|BAL06390.1| hypothetical protein BJ6T_10980 [Bradyrhizobium japonicum USDA 6]
Length = 452
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 83/181 (45%), Gaps = 18/181 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ +GP P ++++W P A +L+ + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPAALVDELEGARPIRPVKLLGENLVLFRDESGRYGLIDRHC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 315 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
++W + G+ P A + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 369 H 369
H
Sbjct: 184 H 184
>gi|444351433|ref|YP_007387577.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
gi|443902263|emb|CCG30037.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
Length = 345
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 126/304 (41%), Gaps = 41/304 (13%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA S D+ V +E +I+R + + ++ C HR PL LG +
Sbjct: 21 RLAKCWHPVARSADIGPQP-VKATLLDEKLIIYRLHERV-VVARDVCPHRGVPLTLGFHD 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEPP 325
I CPYHG + DG+C ++PS+ + + K +L C+ E G++W+ + D PP
Sbjct: 79 AEGIICPYHGLRFGEDGRCNRIPSSPNQPIPAKLNLTCYAAEEHYGLVWVCLDYDADNPP 138
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF--AKGWSVPSLV 383
GF+ E+ G ++ LD+AH + HT TF A+ VP +
Sbjct: 139 RLPTMPHWADDGFQQLTCPAFEVNGFAGRQVEGFLDVAHFAWIHTDTFADAENQQVPDYL 198
Query: 384 KFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQNT 428
T + YW YP +R P +T+ I PG+
Sbjct: 199 PEETENGFVVDYWSTVGNYPASAGYRAPEGFQWLRRFEMHLPFTATLTIHFPGE------ 252
Query: 429 RQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLV 488
L ++ P S + TR+ ++ +F HVP + F +V ED +V
Sbjct: 253 ----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEVY--AFNLRVFEEDRLMV 303
Query: 489 LGQQ 492
Q+
Sbjct: 304 ESQR 307
>gi|27376181|ref|NP_767710.1| dioxygenase [Bradyrhizobium japonicum USDA 110]
gi|27349320|dbj|BAC46335.1| bll1070 [Bradyrhizobium japonicum USDA 110]
Length = 452
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ +GP P ++++W P A +L+ + P E V+FR + G G + C
Sbjct: 10 ITRTGPKDPCGKLMRSYWQPTALVDELEGARPIRPVRLLGENLVLFRDERGRYGLIDRHC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
AHR L G + G ++C +HGW + G+C + P S +N++ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKDSKLCQNIRQRSYPVVEKSG 129
Query: 315 MIWIWPGD-EPPT-ATIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
++W + G+ EPP I C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPEIDCFVAPDTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 369 H 369
H
Sbjct: 184 H 184
>gi|429770138|ref|ZP_19302217.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
gi|429185400|gb|EKY26380.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
Length = 371
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 35/181 (19%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-- 271
+ + W+ VA + D+ ++ ++ EP +I R + G +++ C HRA PL G +
Sbjct: 27 ITDAWYFVALARDVPVASLKRYEIMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVE 86
Query: 272 --NEGR-IQCPYHGWEYSTDGKCEKMPST------QLRNVKIKSLPCFEQEGMIWIW--- 319
EG I+CPYHGW + DG C +PS + +K++S P E +GM+++W
Sbjct: 87 KPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRSYPVRESQGMVFVWMAA 146
Query: 320 -------PGDEPP----TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
P EPP P L+ F+ H I+H ++ L+D AH P+
Sbjct: 147 DARNPSEPDQEPPQFPGAVGQPRLVEWMDFDSH--------IDHAVV--GLMDPAHGPYV 196
Query: 369 H 369
H
Sbjct: 197 H 197
>gi|192289585|ref|YP_001990190.1| phthalate 4,5-dioxygenase [Rhodopseudomonas palustris TIE-1]
gi|192283334|gb|ACE99714.1| Phthalate 4,5-dioxygenase [Rhodopseudomonas palustris TIE-1]
Length = 452
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 10/173 (5%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ +W P A +L+ + + P E V+F+ + G G + C HR
Sbjct: 14 GPGTPCGKLMRAYWQPAALVDELEGERPIKPVRLLGEDLVLFKDETGRYGLIDRDCPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWI 318
L G + G ++C +HGW + DGKC P S +N+K ++ P + G++W
Sbjct: 74 ADLAFGRLENGGLRCAFHGWLFDVDGKCIDTPAEPAGSPLCKNIKQRAFPVVAKGGILWA 133
Query: 319 WPG-DEPPT-ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ G EPP I C + P + +ME L + +D AHA F H
Sbjct: 134 YLGAGEPPAFPEIDCFIAPDTHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|41469406|gb|AAS07229.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 538
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 129/308 (41%), Gaps = 60/308 (19%)
Query: 257 NTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQL------RNVK--IKSL 307
++C HR PL G V++ GR+QC YHGW + G C+ +P +N K + S
Sbjct: 129 DSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPAVHKNSKACVASY 188
Query: 308 PCFEQEGMIWIWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDN 358
PC Q ++W +P EP I P +P PS ++ V +LP + +L++N
Sbjct: 189 PCVVQNNILWFYPRSEPEYKEILQRKRPPYIPQIDDPSFVTVYG--VRDLPYGYDVLVEN 246
Query: 359 LLDLAHAPFTHTSTF-AKGWSVPSLVKFLTPASGLQGYWDPYPIDME------------- 404
L+D AH P+ H + P V+F G P+ ME
Sbjct: 247 LMDPAHVPYAHKGLMRTRKKEDPGRVEFDKEGGG--------PLKMEIEETNVEGFLSML 298
Query: 405 ------FRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLD 458
F PC + + +G+ ++ + + +C+P S ++RL++ +
Sbjct: 299 DRGFFKFVAPCTFYGSPLQTPSQDDQGKEKKKKQPTVMLVFLCIPVSPGRSRLVWAFPRN 358
Query: 459 FASVL-KHVPFMQYLWRHFAEQ-VLNEDLRLVLGQQER------MNNGANVWNLPVGYDK 510
+ K +P Y H + +L+ D+ L L +ER ++N +P D
Sbjct: 359 VGVWMDKIIPRWYY---HIGQNAILDSDIYL-LHIEERNFATVGLDNWQKACYVPTSSDN 414
Query: 511 LGVRYRLW 518
+ + +R W
Sbjct: 415 MIITFRNW 422
>gi|359478456|ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 145/365 (39%), Gaps = 79/365 (21%)
Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
W+PV DL D +V +D E W +F + C HR PL
Sbjct: 82 WYPVMPVCDLDKRIPHAKKVIGLDVVVWWDRNENAWKVF----------DDMCPHRLAPL 131
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 317
G +++ GR+QC YHGW ++ G C+ +P + + P Q ++W
Sbjct: 132 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPSTVQNDIVW 191
Query: 318 IWPGDEPPTAT---------IPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
WP +P IP L PS + E+P + +L++NL+D AH P+
Sbjct: 192 FWPNTDPQYKDILMKNKPPYIPELDDPSYTRLMGN--REIPYGYEVLIENLMDPAHVPYA 249
Query: 369 HTSTFAKGWSVPSLVKFLTPASGLQGYWDPYPIDM-------------------EFRPPC 409
H +VPS K + A G P++M +F PPC
Sbjct: 250 HYGIM----TVPSQKKRVK-ADREGG----RPLEMKIQKLDRSGFIGKQEGGTSKFIPPC 300
Query: 410 M--VLSTIGISKPGKLEG--QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKH 465
+ V S + I K + ++ + + +C+P S +RL++ +F +
Sbjct: 301 VFYVSSDLFIDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDR 360
Query: 466 VPFMQYLWRHFAEQVLNEDLRLVLGQQER-MNNGANVWN----LPVGYDKLGVRYRLWRD 520
V ++++ +L+ DL L+ ++ + M+ G + W +P D V +R W +
Sbjct: 361 V-VPRWMFHVGQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTKSDACVVGFRKWLN 419
Query: 521 ALEKG 525
G
Sbjct: 420 KYAGG 424
>gi|75427753|sp|P94679.1|TSAM1_COMTE RecName: Full=Toluene-4-sulfonate monooxygenase system iron-sulfur
subunit TsaM1; AltName: Full=TS methylmonooxygenase
system, oxygenase M; AltName: Full=Toluenesulfonate
methyl-monooxygenase oxygenase component TsaM1
gi|1790867|gb|AAC44804.1| toluenesulfonate methyl-monooxygenase oxygenase component TsaM
[Comamonas testosteroni]
Length = 347
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
++N W+ A+ T++ + + EP +++R G ++N C HR+ PLH+G
Sbjct: 3 IRNCWYVAAWDTEIPAEGLFHRTLLNEPVLLYRDTQGRVVALENRCCHRSAPLHIGRQEG 62
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK--IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG +++ G C ++P + K IKS P E+ ++WIW GD P P
Sbjct: 63 DCVRCLYHGLKFNPSGACVEIPGQEQIPPKTCIKSYPVVERNRLVWIWMGD--PARANPD 120
Query: 332 LLPPSGFEIHAEIVME-----LPIEHGLLLDNLLDLAHAPFTHTSTFA 374
+ + E M+ + L++DNLLD H + H +T
Sbjct: 121 DIVDYFWHDSPEWRMKPGYIHYQANYKLIVDNLLDFTHLAWVHPTTLG 168
>gi|114321506|ref|YP_743189.1| Rieske (2Fe-2S) domain-containing protein [Alkalilimnicola
ehrlichii MLHE-1]
gi|114227900|gb|ABI57699.1| Rieske (2Fe-2S) domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 410
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 16/188 (8%)
Query: 198 RKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQN 257
+++L GP L+ +W+P+A S +++ + E V+FR G G +
Sbjct: 6 QETLTRIGPGTTMGELLRRYWWPLAASVEVRPGRALARRLLGEDLVLFRTPAGGLGLIDE 65
Query: 258 TCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFE 311
C HR L G V+E I CPYHGW++ G C MP+ LR + P E
Sbjct: 66 HCTHRGASLRCGHVDEEGIACPYHGWKFDHHGHCLAMPAEPRQKPALLRRAATRGFPVQE 125
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEI-----VMELPIEHGLLLDNLLDLAHAP 366
G+++ + G +P LLP + + V ELP +++N +D AH
Sbjct: 126 LGGLVFAYIGPDPAP-----LLPRYDLLLQDDALRDIGVAELPCNWLQIMENSVDPAHVE 180
Query: 367 FTHTSTFA 374
+ H A
Sbjct: 181 WLHGHHLA 188
>gi|428769301|ref|YP_007161091.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683580|gb|AFZ53047.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium aponinum
PCC 10605]
Length = 340
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ ++FW+ VA S LK + ++ E IFR K+G P +Q+ C HR L G V
Sbjct: 2 KFEDFWYVVALSKQLKSNQVLSRQVLGEWLAIFRTKNGKPVALQDRCTHRNSRLSCGKVQ 61
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+G +QCPYHGW Y G +PS ++K K EQ+G I++ +E
Sbjct: 62 QGYLQCPYHGWVYDESGGVVSIPSEGENFKPRASLKAKQYHTCEQDGFIYVCLTEEIKPQ 121
Query: 328 TIPCLLP---PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
P +P G+ + +V +N +D+ H H F K +
Sbjct: 122 FSPFSMPYYQQPGWH-YVRVVHRFNNNVTNCAENFIDIPHTVSVHPGIFRKSY 173
>gi|434403930|ref|YP_007146815.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428258185|gb|AFZ24135.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 502
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV-NEGRI 276
W+PVA L P + + +V++R K G C ++ C HR L G V ++G +
Sbjct: 31 WYPVAIGECLDPSKPQPIELLGKNFVLWRDKQGKWNCFEDLCPHRLVRLSEGRVESDGTL 90
Query: 277 QCPYHGWEYSTDGKCEKMP-----STQLRNVK-----IKSLPCFEQEGMIWIWPGD---- 322
C YH W +++ GKC MP T+ RN + P E++G++W+WP
Sbjct: 91 LCAYHAWRFNSVGKCVSMPQSKDEETEARNCASSRSCVTVYPLQERQGLLWLWPESGSQA 150
Query: 323 -------EPPTATIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTF 373
EP IP L P A + +LP ++N+ D AH P +H +
Sbjct: 151 LIESKLKEP--RVIPELEETPERIVNRSAWNIRDLPYGWDYFIENIADPAHVPVSHHNIM 208
Query: 374 AKGWSVPSL-----VKFLTPASGLQGYWDPYPIDME-----FRPPCMVLSTIGISKPG 421
+ + V+ L+ G P P D+E F+PPC+ + + K G
Sbjct: 209 GSRYKDANYFDMVSVRKLSTQEGFSFETKPTPPDIETLINDFQPPCL-MRVYSVDKSG 265
>gi|330993355|ref|ZP_08317290.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329759385|gb|EGG75894.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 388
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 186 KQSLDIVKGKLPRKSLNVSGPVQPYNTRL----KNFWFPVAFSTDLKDDTMVPFDCFEEP 241
KQS + + L S+ S PV + R +FW+PVA+S +LK + +P
Sbjct: 10 KQSRETMDQSLSPDSMQSSAPVTGRDLRRIRANPDFWYPVAWSRELKPGKTIGTRYAGQP 69
Query: 242 WVIFRGKDGIPGCV---QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP--- 295
+ R +G G V ++ CAHR PL G+V +QC YHGW Y G+C +P
Sbjct: 70 IALVRPLEG--GSVFALEDRCAHRQVPLSKGTVKGDSVQCCYHGWAYGRSGRCIDVPYLG 127
Query: 296 STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
+L N +++ P E +G+I+++PGD T P
Sbjct: 128 KGKLPN-GVRTYPVREVDGLIFVFPGDAAKAETTP 161
>gi|51243146|gb|AAT99362.1| unknown [Sphingomonas sp. tfd44]
Length = 425
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 10/181 (5%)
Query: 204 SGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQNTCAH 261
+G P L+ FW PV S L + P + E + FR DG+ G + C H
Sbjct: 13 TGRGTPMGEALRRFWIPVLLSEQLSEPDGPPRRLEIMGETFAAFRNTDGVVGILDEQCCH 72
Query: 262 RACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ----LRNVKIKSLPCFEQEGMIW 317
R L LG V I+C +HGW+++ DG + P+ + KS P E+ GMIW
Sbjct: 73 RGASLVLGRVEGCGIRCLFHGWKFAVDGTIMETPNVLDPRFKEKFRAKSYPVREEGGMIW 132
Query: 318 IWPGD---EPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
++ G EPP P P+ + V++ L + L+D +H H FA
Sbjct: 133 MYMGPAELEPPFPHWPYFDVPAENRLAVAFVVD-ECNFVQLGEALVDSSHLTILHKDIFA 191
Query: 375 K 375
+
Sbjct: 192 R 192
>gi|197295557|ref|YP_002154098.1| putative oxidoredutase [Burkholderia cenocepacia J2315]
gi|444360500|ref|ZP_21161724.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444366598|ref|ZP_21166625.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|195945036|emb|CAR57661.1| putative oxidoredutase [Burkholderia cenocepacia J2315]
gi|443599939|gb|ELT68178.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|443604315|gb|ELT72259.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 371
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLAEA 147
Query: 333 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|134290944|ref|YP_001114713.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
vietnamiensis G4]
gi|134134133|gb|ABO58458.1| Rieske (2Fe-2S) domain protein [Burkholderia vietnamiensis G4]
Length = 373
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRAESGAVYALEDRCAHRQVPLHAGVVDGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPG-----DEPPTA 327
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PG DE P
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCRETHGVIFVFPGDATLADERPVP 151
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ P+ ++ E+ + + +NL+D+ H F H +
Sbjct: 152 ALESADNPA-YKTR-RFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|91782296|ref|YP_557502.1| aromatic acid dioxygenase alpha subunit [Burkholderia xenovorans
LB400]
gi|91686250|gb|ABE29450.1| phthalate 4,5-dioxygenase, oxygenase subunit [Burkholderia
xenovorans LB400]
Length = 440
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVP-FDCFEEPWVIFRGKDGIPGCVQNTCAHRA 263
GP P ++ FW P S+DL D E + FR +G G V + C HR
Sbjct: 14 GPGTPTGQFMRLFWLPFLPSSDLSVDGQPQRVRLLGEDLLAFRDSEGRVGLVDHACPHRG 73
Query: 264 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFEQEGMIWI 318
PL G ++C YHGW++ DG+ + P+ + + V+IKS PC E+ G++W
Sbjct: 74 APLVFGRNENSGLRCVYHGWQFGVDGRVIETPAEPIESRLKEKVRIKSYPCRERNGIVWT 133
Query: 319 WPGDE-----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTS 371
+ GD PP + + P +H ++ E L ++ +D AHAP H
Sbjct: 134 YMGDASADGLPPLPNLEWNMVPVE-NVHFSFRVQ---ECNWLQAVEGEIDSAHAPILHGR 189
Query: 372 TFAKG 376
++G
Sbjct: 190 IDSQG 194
>gi|295700277|ref|YP_003608170.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439490|gb|ADG18659.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 417
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVP--FDCFEEPWVIFRGKDGIPGCVQNT 258
L G P ++ FW P S+++++ P E V FR DG G ++
Sbjct: 10 LTQVGKGTPNGDMIRQFWIPALLSSEIQEPGGAPKRVRLLGEDLVAFRDSDGKVGLLEEQ 69
Query: 259 CAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQE 313
C HR L LG +EG ++C YHGW+++ DG+C P S +K + P E
Sbjct: 70 CPHRRASLALGDNSEGGLRCLYHGWKFAVDGQCMDTPTEPEDSKLCSRIKAVAYPVREVA 129
Query: 314 GMIWIWPGDEPPTATIP--CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTS 371
G+IW + GD P L ++ A V+E + ++ +D AHA H
Sbjct: 130 GVIWTYMGDPAKVPQFPDFDFLSYPAEKVAAFKVLE-DCNYAQAVEGTIDSAHAGVLHRE 188
Query: 372 TFAKGWSVPS 381
+ WS P+
Sbjct: 189 ---QPWSAPA 195
>gi|365863184|ref|ZP_09402907.1| putative oxygenase Rieske iron-sulfur component [Streptomyces sp.
W007]
gi|364007408|gb|EHM28425.1| putative oxygenase Rieske iron-sulfur component [Streptomyces sp.
W007]
Length = 378
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA S ++ + E +FRG+ G +++ CAHR PL +G V+
Sbjct: 4 DFWYPVAQSRSVRGGQVAAAVFAGERMALFRGRSGAVHALEDRCAHRQVPLSMGVVDGET 63
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YH W Y DG+ ++P + + +++ P E G+++++PGD A P
Sbjct: 64 LRCCYHAWAYRGDGRISQIPYLSKGDGRPPRGVRAYPVREAYGLVFVFPGDPEKAAVTPL 123
Query: 332 LLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK 375
P GF M + + +NLLD+ H F H K
Sbjct: 124 PEVP-GFASPQYRTMAFSRTVRCHYSFMHENLLDMNHQ-FLHRGVVGK 169
>gi|386399030|ref|ZP_10083808.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
gi|385739656|gb|EIG59852.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
WSM1253]
Length = 452
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 18/181 (9%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTC 259
+ +G P ++++W P A +L D + P E V+FR + G G + C
Sbjct: 10 ITRTGAKDPCGKLMRSYWQPAALVDELDGDRPIRPVRLLGENLVLFRDETGRYGLIDRHC 69
Query: 260 AHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEG 314
AHR L G + G ++C +HGW + G+C + P S +NV+ +S P E+ G
Sbjct: 70 AHRGADLAFGRLEHGGLRCAFHGWLFDATGQCIETPAEPKGSKLCQNVRQRSYPVVEKSG 129
Query: 315 MIWIWPGDEPPTA--TIPCLLPPS----GFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
++W + G+ P A + C + P F+ H +E G +D AHA +
Sbjct: 130 ILWAYLGEGEPPAFPELDCFVAPGTHTFAFKGHMACNWLQALEVG------IDPAHASYL 183
Query: 369 H 369
H
Sbjct: 184 H 184
>gi|428201421|ref|YP_007080010.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
gi|427978853|gb|AFY76453.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
Length = 356
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ VA ST+++D+ + + + V++R K G +++ C HR L G V
Sbjct: 21 NHWYVVARSTEVRDEP-IGVTLWHQAIVLYRDKTGKVHALEDRCPHRQVKLSHGKVIGNE 79
Query: 276 IQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIWPGDEPP---TAT 328
++C YHGW ++ +G C +P + +L N KI+ P E +G IW++PGD +
Sbjct: 80 LECAYHGWRFNWEGNCVAVPYLASNQKLPNCKIRRYPVRELDGFIWLFPGDLDKLDRNSI 139
Query: 329 IPCLLPPSGF--EIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFL 386
P +P I ++E + L++NL+D+ H H + W+ L
Sbjct: 140 QPMGVPEWNHLNYIATVSIIECKGHYSFLIENLMDMYHG---HLHDDYQAWASAVLKDLN 196
Query: 387 TPASGLQGYWDP---YPID 402
+ Y++ Y ID
Sbjct: 197 IDNKRVNAYYEAQSYYKID 215
>gi|398998322|ref|ZP_10701100.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398120749|gb|EJM10402.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 358
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
N W+ A +LKD V +P V+FR +G +++ C HRA PL G++ E
Sbjct: 24 NQWYVAALGWELKDKP-VGRTLLNKPVVLFRKANGEVAALEDRCCHRALPLSNGTLEESG 82
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGD--------EPP 325
I+C YHG + GKC ++P K+ + EQ+ ++WIW G EPP
Sbjct: 83 IRCGYHGLLFDERGKCVEIPGQDKIPSKAKVPAYHVSEQDQIVWIWFGSEAQPEPDCEPP 142
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSV 379
T + SG + V + L+ DNL+DL+H + H T S+
Sbjct: 143 TYPVHS----SGKYLFEGNVYHYNAPYQLIHDNLMDLSHLGYVHLRTIGGNASI 192
>gi|91779882|ref|YP_555090.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia xenovorans
LB400]
gi|91692542|gb|ABE35740.1| putative rieske (2Fe-2S) domain protein [Burkholderia xenovorans
LB400]
Length = 406
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
++W+P+A+S ++K +P V+ R + G +++ CAHR PLH G V+
Sbjct: 52 DYWYPLAWSHEVKRGKTHGVTFAGDPIVLARTEGGKVFALEDRCAHRQVPLHQGVVDGES 111
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGD 322
I+C YHGW Y GKC +P + ++S PC E EG+I+++PG+
Sbjct: 112 IRCGYHGWTYDCSGKCIDVPYLGRERLPNGVRSYPCREVEGLIFVFPGN 160
>gi|398810739|ref|ZP_10569550.1| Rieske (2Fe-2S) domain-containing protein [Variovorax sp. CF313]
gi|398082178|gb|EJL72937.1| Rieske (2Fe-2S) domain-containing protein [Variovorax sp. CF313]
Length = 438
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 22/186 (11%)
Query: 201 LNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCA 260
L GP +P L+ +W P+A +++ + P E V+++ G G V C
Sbjct: 10 LTEVGPGKPMGDYLRRYWHPIAGASEFDGKAVKPLRILGEDLVLYKDLSGNYGLVDRRCP 69
Query: 261 HRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL--------RNVKIKSLPCFEQ 312
HR + G V + ++C YHGW+Y G+C P + RN KIK+ P E+
Sbjct: 70 HRNADMSYGYVEKCGLRCSYHGWQYDQGGQCIHQPFEETLDPGARMRRNTKIKAYPVQEK 129
Query: 313 EGMIWIWPGDEPPTATIPCLLP-------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHA 365
G++W + G P LLP +GF + E+P +N +D H
Sbjct: 130 AGLLWAYMGPLPAP-----LLPDWELFNYKNGFA--QAVFAEIPCNWFQCQENSIDPVHF 182
Query: 366 PFTHTS 371
+TH +
Sbjct: 183 EWTHNN 188
>gi|78059781|ref|YP_366356.1| dioxygenase, iron-sulfur subunit [Burkholderia sp. 383]
gi|77964331|gb|ABB05712.1| Dioxygenase, iron-sulfur subunit [Burkholderia sp. 383]
Length = 371
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 15/170 (8%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVHFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCREAHGLIFVFPGD----ATLADT 147
Query: 333 LPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P E + E+ + + +NL+D+ H F H +
Sbjct: 148 RPFPALESADDRAYKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|167576860|ref|ZP_02369734.1| PrnD [Burkholderia thailandensis TXDOH]
Length = 360
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 95/241 (39%), Gaps = 22/241 (9%)
Query: 199 KSLNVSGPVQPYN--TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQ 256
++L P+ Y+ TRL W+ S DLKD F P V +RG G +
Sbjct: 8 QALTKEHPLGAYDATTRLAASWYVAMRSDDLKDKP-TELTLFGRPCVAWRGATGRAVVMD 66
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQL---------RNVKIKSL 307
CAH L G V +G IQCP+H W Y G+C +P L R + +L
Sbjct: 67 RHCAHLGANLADGRVKDGCIQCPFHHWRYDEQGQCVDIPGHSLAVRRLEPVPRGARQPTL 126
Query: 308 PCFEQEGMIWIWPGDEPPTATIPCLLPP---SGFEIHAEIVMELPIEHGLLLDNLLDLAH 364
E+ G +W+W G P +P + +G +H E +++N D H
Sbjct: 127 VTAERYGYVWVWYGSPRPLHPLPDIAAADVDNGDFMHLHFAFETTTAVLRIVENFYDAQH 186
Query: 365 APFTHT---STFA----KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGI 417
A H S F W V+ L A G + +D F P M+ +G+
Sbjct: 187 ANPVHALPISAFELKLFDDWRQWPEVESLARAGAWFGAGIDFTVDRYFGPLGMLSRALGL 246
Query: 418 S 418
+
Sbjct: 247 N 247
>gi|86608774|ref|YP_477536.1| Rieske family iron-sulfur cluster-binding protein [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557316|gb|ABD02273.1| iron-sulfur cluster-binding protein, Rieske family [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 339
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+ FW+PV + L+ + PF+ E V++ K G P V + C HR+ L G V +
Sbjct: 9 FRRFWYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCD 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS--TQLR---NVKIKSLPCFEQEGMIWIWPGDEP--PT 326
G I+CPYHGWE+ G C K+P Q R + +I + C + G W+ +P
Sbjct: 69 GHIRCPYHGWEFDGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLHPQPLRGI 128
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
IP PS IH E + +N D AH F H +TF
Sbjct: 129 PVIPEAEDPSYRLIH-EFYERWECASLRICENEFDAAHISFVHQNTFGS 176
>gi|388544262|ref|ZP_10147550.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. M47T1]
gi|388277445|gb|EIK97019.1| vanillate O-demethylase oxygenase subunit [Pseudomonas sp. M47T1]
Length = 347
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L W+PVA DL D + + P V+FR GI ++ C HR PL +G V
Sbjct: 26 LAQHWYPVARVQDLTDKPLAAM-LLDVPLVLFRTSAGI-TIARDICPHRGVPLSMGWVEH 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS----TQLR-NVKIKSLPCFEQEGMIWI-WPGDEPPTA 327
I CPYHG Y DG+C K+P+ T++ +K+ E+ G++W EP
Sbjct: 84 DEIVCPYHGLHYGADGRCSKIPAQPDLTRISPRFTLKTFAAVERFGLVWTSLHSLEPDLP 143
Query: 328 TIPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
+P P H I+ +++ G L+ +D+AH + H FA VPS
Sbjct: 144 QLPTWDDPD----HQAILPPWVDIAGSSGRQLEGFIDVAHFAWVHHEAFADRDNPVVPSY 199
Query: 383 VKFLTPASGLQGYW---DPYPIDME------FR--------PPCMVLSTIGISKPGKLEG 425
LT YW YP ++ FR PP + T+ G+L
Sbjct: 200 DTQLTDYGLRTEYWSGVSNYPKALQHLEPEGFRWLRVFDVYPPFSAVLTVHFPDDGRL-- 257
Query: 426 QNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDF 459
C L+ P S +KTRL ++ +F
Sbjct: 258 -----CI-----LNAACPMSARKTRLFVPLTRNF 281
>gi|290958800|ref|YP_003489982.1| oxidoreductase [Streptomyces scabiei 87.22]
gi|260648326|emb|CBG71437.1| putative oxidoreductase [Streptomyces scabiei 87.22]
Length = 406
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGS-VNEGRI 276
W+ V S +L+ +V F + FRG DG C H L +G V +G +
Sbjct: 35 WYAVLRSGELRAGRVVSLHYFGRALIAFRGSDGRAAVRDAHCPHYGAHLGVGGKVVDGAV 94
Query: 277 QCPYHGWEYSTDGKCEKMP-STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPP 335
QCP+HGW + TDG+C + P +T+ V I P E G+++++ G P +P +
Sbjct: 95 QCPFHGWRFGTDGRCVEAPFATRTPKVSIGGFPVREHSGLVFVYAGPGEPAWEVPEIEET 154
Query: 336 SGFEIHAEI--VMELPIEHGLLLDNLLDLAHAPFTHTST 372
+ + I V I + +N++D +H F H +
Sbjct: 155 GSLDFASPIDDVCRARIHIQEMRENIVDESHFHFIHGQS 193
>gi|294497580|ref|YP_003561280.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium QM
B1551]
gi|294347517|gb|ADE67846.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium QM B1551]
Length = 335
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 122/326 (37%), Gaps = 47/326 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W P A+S DL D + EE V+FR + I ++ C HR L LG V + I
Sbjct: 11 WLPAAYSHDLTDQPL-QVTILEERVVLFRTTNAIKA-FKDLCIHRGAALSLGKVVDDCIV 68
Query: 278 CPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCL 332
CPYHGW+Y G C K+P K + C E+ G+IW+ E +P
Sbjct: 69 CPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYACVEKYGIIWVKMNSEAGDTPLPFY 128
Query: 333 LP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG-----------WS- 378
SGF+ L +++N LD++H F H + W
Sbjct: 129 DEHLNSGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYAEIPDYKVHWKD 188
Query: 379 ---VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHL 435
V + A G + Y RP L + + G++
Sbjct: 189 NRYVSDEIAVYADADGTGNFATIYYTFEILRPTVARLKKVNY-ETGEI-----------F 236
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWRHFAEQVLNEDLRLVLGQQ 492
L LP +K+ + FA V ++ F QY +R F + ++ +D +V Q+
Sbjct: 237 SMLFAVLPEEERKSTV-------FALVSRNYSFDAPDQY-FRDFQQLIIEQDTSIVESQK 288
Query: 493 ERMNNGANVWNLPVGYDKLGVRYRLW 518
L + D+L + YR W
Sbjct: 289 PEELPLDLQAELHLNPDRLSIAYRRW 314
>gi|240137223|ref|YP_002961692.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
gi|418060776|ref|ZP_12698672.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
gi|240007189|gb|ACS38415.1| putative rieske 2Fe-2S family protein [Methylobacterium extorquens
AM1]
gi|373565667|gb|EHP91700.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
Length = 361
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 132/346 (38%), Gaps = 41/346 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVVGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLICPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 384
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 385 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
P +S + P +++EFR P + L I +
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI-------------K 250
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
A + P +T L +S ++ P + L R F L +D +++
Sbjct: 251 AGAKRVANYTFATPMGPNRTMLTNALSWSMPALNLLKPIARPLMRQF----LTQDQQVLQ 306
Query: 490 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 535
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|374711187|ref|ZP_09715621.1| Rieske (2Fe-2S) domain-containing protein [Sporolactobacillus
inulinus CASD]
Length = 346
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 56/309 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N+W+PVA S + D + + V++R K G ++ C HR PL +G V +
Sbjct: 26 LINYWYPVAESAQVSDQPLA-VTLLDVALVVYRAK-GKAVVARDLCIHRGTPLSMGWVED 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDE----PP 325
I CPYHG+ YS DG+C +P+ + + P E+ G++W E PP
Sbjct: 84 DNIVCPYHGFSYSADGQCVSIPAHPEAKISPRLCLTVYPVVERYGLVWTTLAGESDHVPP 143
Query: 326 TATIPCLLPPSGFEIHAEIV---MELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVP 380
P G E ++ + +++ G ++ +D+AH + HT+TFA VP
Sbjct: 144 -------FPIWGNEDYSSFLAPTIDINGSAGRQIEGFVDVAHFAWVHTATFADRNNAFVP 196
Query: 381 SL----------VKFLTPASGL-QGYWDPYPI------DMEFRPPCMVLSTIGISKPGKL 423
S +L+ S +G DP P + + PP + + + + P
Sbjct: 197 SYKVSRTPQGIHTDYLSTVSNYPKGMADPSPAAFKWLREYDIYPP--LCARLIVHFP--- 251
Query: 424 EGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNE 483
EG+ L L+ P S +KTRL ++ +F L F ++ NE
Sbjct: 252 EGK-------QLWILNAASPISARKTRLFCPIAQNFDKTLSVEDACA-----FNLKIFNE 299
Query: 484 DLRLVLGQQ 492
D +V Q+
Sbjct: 300 DREMVENQK 308
>gi|356525253|ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 531
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 42/313 (13%)
Query: 248 KDGIPGCVQNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------Q 298
+G+ + C HR PL G +++ GR+QC YHGW ++ G+C+ +P
Sbjct: 118 NEGVWQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECKLIPQAPPDGPPVHT 177
Query: 299 LRNVKIKSLPCFEQEGMIWIWPGDEPPTATI-----PCLLPPSGFEIHAEIVMELPIEHG 353
+ + + P Q ++W WP +P I P +P + +++ I +G
Sbjct: 178 SKKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPYIPELDDPSYTKLMGNRDISYG 237
Query: 354 --LLLDNLLDLAHAPFTHTSTF----------AKGWSVPSLVKFLTPASGL---QGYWDP 398
+L++NL+D AH P+ H +G L +G QG+
Sbjct: 238 YEVLIENLMDPAHVPYAHYGLMRTPKPKVKVDREGGRPLELSIETLDINGFTANQGW--- 294
Query: 399 YPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLD 458
+F PPC+ +P + VC+P S K+RL++ +
Sbjct: 295 --SKSKFMPPCIFYVYTDSDQPASSAETQKSSAQKKFALIFVCVPVSPGKSRLIWCFPRN 352
Query: 459 FAS-VLKHVPFMQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLG 512
F + K VP ++++ ++L+ DL L+ + +Q+ ++ G W+ +P D L
Sbjct: 353 FGVWIDKIVP--RWIFHVGQNRILDSDLYLLHVEEQKIVDIGPKNWHKACFVPTKSDALV 410
Query: 513 VRYRLWRDALEKG 525
+ YR W G
Sbjct: 411 IGYRNWLKKYAGG 423
>gi|170743866|ref|YP_001772521.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
4-46]
gi|168198140|gb|ACA20087.1| Rieske (2Fe-2S) domain protein [Methylobacterium sp. 4-46]
Length = 354
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P L + W+ V S ++ + EE V+ R G +++ C HR L
Sbjct: 15 PIRRPLDDVWYCVGESRRFREGRLCAVTLGEEAIVVGRAAGGGLFALRDRCPHRGMALSA 74
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGD 322
G + EGR+ CP+HGWE+ DG+C +P+ + R V++ E G++WI G+
Sbjct: 75 GRLVEGRLVCPFHGWEFRPDGQCAAIPALAARDESDFRTVRLPRFSVREASGLVWIAAGE 134
Query: 323 EPPTA-TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
P A IP + P +G + +E+ L+ + +D AH + H
Sbjct: 135 PRPDAPPIPEVEFPYAGMLVE---TLEVEASFDLVALSFVDPAHVAYVH 180
>gi|328545346|ref|YP_004305455.1| Ring-hydroxylating dioxygenase, large terminal subunit [Polymorphum
gilvum SL003B-26A1]
gi|326415088|gb|ADZ72151.1| Ring-hydroxylating dioxygenase, large terminal subunit [Polymorphum
gilvum SL003B-26A1]
Length = 353
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 58/319 (18%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+ W+ ++K M E +I R + G +++ C HR PL G +
Sbjct: 9 LRGLWYVACPGAEIKAGAMTGRKLMGELVLIGRDRHGKVFALRDICPHRGIPLRHGWFDG 68
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQ------LRNVKIKSLPCFEQEGMIWIW---PGDEP 324
+QC YHGW++ TDG C +PST + + P EQ+G+IWI+ G++P
Sbjct: 69 EHVQCCYHGWKFDTDGACVDIPSTHEYQTIDYSKITCGAYPAVEQQGLIWIYFAEKGEKP 128
Query: 325 PTATIPC--LLPPSGFEIHAEIVMELP----IEHGLLLDNLLDLAHAPFTHTSTFAK--- 375
P LLP + + + P ++H L L+D HA F HTS + K
Sbjct: 129 EDGRQPAPPLLPDFAADQGPSVAIMQPFVCSVDHAAL--GLMDPTHAAFVHTSWWFKKNG 186
Query: 376 ---------------GWSVPSLVKFLTPASGLQGYW---DPYPIDMEFRPPCMVLSTIGI 417
GW ++V+ P + + D ++ +R P + + I
Sbjct: 187 AKLRPKEKVFEPSELGW---AMVRHKIPPQNIAYRYLLGDNVTTEISYRLPGLRIEHI-- 241
Query: 418 SKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFA 477
+ R C L + + + R L+ ++ + P ++YL F
Sbjct: 242 --------KGDRHCVVGLTTI-TPVTEDETEVRQLFWSTIGWLKPFN--PLVRYLMNVF- 289
Query: 478 EQVLNEDLRLVLGQQERMN 496
L++D R+V+ Q+E +
Sbjct: 290 ---LDQDRRVVIQQREGLE 305
>gi|383642875|ref|ZP_09955281.1| oxygenase Rieske iron-sulfur component [Streptomyces chartreusis
NRRL 12338]
Length = 388
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+PVA S ++ + ++ E +FRGK G +++ CAHR PL +G V
Sbjct: 35 DHWYPVALSRRVRAERVLATTFAGERIALFRGKSGDVHALEDRCAHRQVPLSMGVVEGET 94
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YH W Y DG+ ++P + + ++ P E G+++++PGD A P
Sbjct: 95 LRCRYHAWAYRGDGRISQIPYLAKGDRRPPRGVRGYPVREAYGLVFVFPGDPQRAAATPL 154
Query: 332 -LLPPSGFEIHAEIVMELPIE--HGLLLDNLLDLAHAPFTHTSTFAK 375
LP G + + + + + +NLLD+ H F H +
Sbjct: 155 PHLPAFGSPRYRTMTYSRTVRCHYSFMHENLLDMNHQ-FLHRGVVGR 200
>gi|384251579|gb|EIE25056.1| hypothetical protein COCSUDRAFT_46572 [Coccomyxa subellipsoidea
C-169]
Length = 548
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 149/376 (39%), Gaps = 77/376 (20%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV--NEGR 275
W+P+AF DL P + E V++R D C Q+ C HR PL G + ++G
Sbjct: 89 WYPLAFVEDLDPKVPHPVELLGERLVLWRDADKQWRCFQDKCPHRLAPLSEGRIEPSDGT 148
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVKIKSLPCFEQ------------EGMIWIWPGDE 323
+ C YHGW + +GKC +P Q + K + C +G +W++ G+
Sbjct: 149 LMCSYHGWRFDGEGKCTDIP--QSLDAKANAAACSNPRSCAISHPTQVLQGKVWVF-GEG 205
Query: 324 PPTATI------PCLL-------PP-------SGFEIHAEIVMELPIEHGLLLDNLLDLA 363
A I P LL PP F +LP L++NL D +
Sbjct: 206 GSRAFIDSAAVKPALLEDLEDTYPPREKNGGEDCFFAGGHYARDLPYAWSTLMENLADPS 265
Query: 364 HAPFTHTSTFAKGWSVPSLVKFLT--PASGLQGYWDPYPI---------------DMEFR 406
H F+H + +V +K ++ P+ + D + + DMEF
Sbjct: 266 HVNFSHHNVVGDR-TVDQTMKIVSKEPSKTVPSIKDTFKMAVTSFDDKARDYQTFDMEFV 324
Query: 407 PPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 466
PC+V I G H + +P+ ++++L+ M L +S+
Sbjct: 325 APCLVKWGIPPWGVG----------IKHGYMPMYMIPTGPGRSKILWCMLLPTSSMPAPA 374
Query: 467 PFMQYL---W-RHFA--EQVLNEDLRLVLGQQERMNNGAN-----VWNLPVGYDKLGVRY 515
MQ L W +H + QVL+ D L+ GQ+ ++ A ++ +P D+ Y
Sbjct: 375 KLMQRLTPKWLQHISITPQVLDGDTGLLHGQEVAVSKEAEKDLNRLYYMPAQADRFVAAY 434
Query: 516 RLWRDALEKGAKQLPF 531
R W A G LP
Sbjct: 435 RKWL-AGRGGGGPLPM 449
>gi|162146374|ref|YP_001600833.1| ubiquinol-cytochrome c reductase [Gluconacetobacter diazotrophicus
PAl 5]
gi|161784949|emb|CAP54492.1| putative Ubiquinol-cytochrome c reductase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 369
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 10/161 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA+S +LK + +P + R +G +++ CAHR PL G V
Sbjct: 38 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPVEGGVFALEDRCAHRQVPLSKGVVKGQA 97
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP-- 330
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD ++P
Sbjct: 98 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPALADSVPFP 156
Query: 331 --CLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
+ F+ + + + + +NL+D+ H F H
Sbjct: 157 KLAQVANPAFKTR-QFGPRVKCHYTFMHENLMDMNHQ-FLH 195
>gi|421852528|ref|ZP_16285215.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479205|dbj|GAB30418.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 338
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 45/305 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L ++W P+A +L+D + + P VI+R + I + C HR PL +G N
Sbjct: 15 LASYWHPIALVRELEDKPLG-VTLLDAPLVIYRAGEEI-VVADDLCPHRGVPLSMGKGNG 72
Query: 274 GRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIW--IWPGDEPPTA 327
+ C YHG+++ G+C ++P S + +++ P E+ G+IW + P D
Sbjct: 73 QTVACAYHGFQFGHQGQCVRIPAHPDSAIPSRLNLRTYPVVERYGLIWTCLRPQDN-EDI 131
Query: 328 TIPCL--LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSLV 383
+IP + +GF+ +++ G ++ +D+AH F HT TFA VP+ +
Sbjct: 132 SIPSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYM 191
Query: 384 KFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATH--------- 434
+T PY + E+R + IG S+ G+ + + R H
Sbjct: 192 PKMT----------PYGFEAEYR-SNVGNYPIGQSERGRPDFEWLRHFRVHVPFTATLEI 240
Query: 435 -------LHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
L ++ P S KKTR+ M +F + L +Q ++ F ++V ED L
Sbjct: 241 HFPDNGRLVIMNAASPVSAKKTRMFAPMCRNFDTDLP----LQDVY-DFNQKVFEEDRAL 295
Query: 488 VLGQQ 492
V Q+
Sbjct: 296 VEAQK 300
>gi|359478793|ref|XP_002283586.2| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like [Vitis
vinifera]
Length = 473
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 143/368 (38%), Gaps = 81/368 (22%)
Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
W+PVA DL D +V +D E W +F + CAHR PL
Sbjct: 20 WYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVF----------DDACAHRLAPL 69
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPST--------QLRNVKIKSLPCFEQEGMIW 317
G +++ GR+QC YHGW ++ G C+ +P + + P Q G++W
Sbjct: 70 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQHGIVW 129
Query: 318 IWPGDEPPTATI-----PCLLPPSGFEIHAEIV--MELPIEHGLLLDNLLDLAHAPFTHT 370
WP +P I P +P + + + + P + +L++N++D AH + H
Sbjct: 130 FWPNTDPQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMDPAHVAYAHY 189
Query: 371 STFAKGWSVPSL------------VKFLTPASGLQGYWDPYPIDME-------FRPPCMV 411
+P ++ S + G+ D E F PPC+
Sbjct: 190 GIV----QIPQAKDRXADREGGTPIEISVKRSAIDGF------DAERELARSKFIPPCLY 239
Query: 412 LSTIGI----SKPGKLEGQNTRQCATHLHQ-----LHVCLPSSRKKTRLLYRMSLDFASV 462
+ + S G + ++H+ + +C+P S +RL++ +F
Sbjct: 240 YTCLDFPAYQSNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLW 299
Query: 463 LKHVPFMQYLWRHFAEQVLNEDLRLV-LGQQERMNNGANVWN----LPVGYDKLGVRYRL 517
H+ +++ +L+ DL L+ L +++ M G + W+ +P D V +R
Sbjct: 300 TDHI-IPRWMLHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTKSDAHIVAFRA 358
Query: 518 WRDALEKG 525
W G
Sbjct: 359 WLRKYSGG 366
>gi|187921686|ref|YP_001890718.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720124|gb|ACD21347.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 364
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 9/186 (4%)
Query: 197 PRKSLNVSGPVQPY-NTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 255
P + + + P+Q Y + L+N+W+PVA S + D V + V++R K+G +
Sbjct: 4 PNTNQDAADPIQSYLDKGLRNYWYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGQVRAL 62
Query: 256 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQ---LRNVK-IKSLPCFE 311
++ C HR L LG G + C YHG E G+ K+P+ L K +KS P E
Sbjct: 63 EDRCPHRGARLSLGWNLGGSVACWYHGIEIDGSGEVTKVPAVSNCPLEGQKCVKSYPVEE 122
Query: 312 QEGMIWIWPGDEPPTATIPCLLPPS--GFEIHAEIVM-ELPIEHGLLLDNLLDLAHAPFT 368
G I++W GDE P +LP G E + + M + +DN++D H +
Sbjct: 123 HAGAIFLWFGDEAHKEPTPLVLPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYL 182
Query: 369 HTSTFA 374
H ++ +
Sbjct: 183 HATSHS 188
>gi|338534630|ref|YP_004667964.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337260726|gb|AEI66886.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 332
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 102/264 (38%), Gaps = 24/264 (9%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHL 268
P+ + W+ VA S L + + V++R G C C HR L L
Sbjct: 9 PHGEQWAAHWYAVARSPALGRERPLGLQRLGRRLVLWRDAAGEAHCADAACPHRGADLGL 68
Query: 269 GSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGDE 323
G V EG ++CPYHG+ Y G C MP + R + ++ P E G IW W G +
Sbjct: 69 GRVREGALECPYHGFRYEGGGACLAMPCEGRDAKPSRALALRVHPVREAHGFIWAWLGGQ 128
Query: 324 -----PPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
PP + P+ E V +++ ++DL H PF H G++
Sbjct: 129 ARAPLPPLPWLAGAPEPAANSASVEEVWGARFTR--VMEGMMDLHHFPFAHRRYVPPGYT 186
Query: 379 V--PSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLS-TIGISKPGKLEGQNTRQCATHL 435
P V+ A G+ + E RPP I + PG L + T + L
Sbjct: 187 RLDPYEVQVEEGAIRTVGW-----LRKEERPPGTGFRFDIHVGYPGVLHLRFTPR----L 237
Query: 436 HQLHVCLPSSRKKTRLLYRMSLDF 459
VC P + T + R D+
Sbjct: 238 EAAVVCTPVDAEHTWIAARFHQDY 261
>gi|331695267|ref|YP_004331506.1| Phthalate 4,5-dioxygenase [Pseudonocardia dioxanivorans CB1190]
gi|326949956|gb|AEA23653.1| Phthalate 4,5-dioxygenase [Pseudonocardia dioxanivorans CB1190]
Length = 448
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 199 KSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFRGKDGIPGCVQ 256
++L GP P L+ +W P A S +L + P E V FR G G +Q
Sbjct: 8 ETLCRVGPGTPMGEVLRRYWTPAALSEELPEPDCPPLRVTLLGEKLVAFRDTTGKVGLIQ 67
Query: 257 NTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRN-----VKIKSLPCFE 311
C HR L G E ++CPYHGW++ DG+C MPS + V+ K+ P E
Sbjct: 68 ENCPHRGASLFFGRNEECGLRCPYHGWKFDADGRCVDMPSEPPESSFKDRVRAKAYPVHE 127
Query: 312 QEGMIWIWPG 321
G++W + G
Sbjct: 128 SGGIVWTYMG 137
>gi|75906758|ref|YP_321054.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75700483|gb|ABA20159.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 460
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 139/341 (40%), Gaps = 36/341 (10%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIP-GCVQNTCAHRA 263
G P++ W+PV + DL F + VI+ + ++ C HR
Sbjct: 14 GGSDPHSFDWHEAWYPVHYLEDLDKSKPTAFTLLGKDIVIWWDQQSQTWQAFEDQCPHRL 73
Query: 264 CPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMP-------STQLRNVKIKSLPCFEQEGM 315
PL G +NE G ++CPYHGW ++ DG C+++P + + + S E++GM
Sbjct: 74 APLSEGRINEEGLLECPYHGWSFAGDGSCQRIPQQPEGGQAETSQRACVTSWLTTERQGM 133
Query: 316 IWIWPGDEPPTA--TIPCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
++++ G+ A IP + P P G+ I ++P + LL+N+LD +H +TH
Sbjct: 134 LFVYIGNPENAAKTKIPVVEPLEESPDGWVI-INTFRDVPYDALTLLENILDPSHLAYTH 192
Query: 370 TSTFA--KGWSVPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQN 427
T K + L ++ G +G W + LST ++ N
Sbjct: 193 HKTVGNRKNAAPLELEVVVSGKHGFKGVW-----HQSIKAGQSELSTTFVAPALMWHDIN 247
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQY---LWRHFAEQVLNED 484
+ + + + P + + RL R F S L + F++ + H + + ED
Sbjct: 248 SER--GRILTVVYATPIRKGECRLFARFPFKFPSKLPGI-FIKLRPRWYYHLGQNGVLED 304
Query: 485 LRLVLGQQERM-------NNGANVWNLPVGYDKLGVRYRLW 518
++ L QER N + LP D R W
Sbjct: 305 DQIFLHYQERYLQAKGGSPNFTKAFYLPTKADSFVFELRQW 345
>gi|209543624|ref|YP_002275853.1| Rieske (2Fe-2S) domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531301|gb|ACI51238.1| Rieske (2Fe-2S) domain protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 357
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA+S +LK + +P + R +G +++ CAHR PL G V
Sbjct: 26 DFWYPVAWSRELKVGKTIGTRYAGQPIALVRPVEGGVFALEDRCAHRQVPLSKGVVKGQA 85
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
+QC YHGW Y G+C +P +L N +++ PC E+ G+I+I+PGD ++P
Sbjct: 86 VQCCYHGWAYGRSGRCIDVPYLGKGKLPN-GVRTYPCREEGGLIFIFPGDPALADSVP 142
>gi|115360703|ref|YP_777840.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
AMMD]
gi|170701512|ref|ZP_02892464.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|115286031|gb|ABI91506.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria AMMD]
gi|170133569|gb|EDT01945.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 373
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHGW Y+ D G+C +P +L N +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRDRLPN-GVRAYPCREAHGLIFVFPGD----ATLAD 146
Query: 332 LLPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P E + E+ + + +NL+D+ H F H +
Sbjct: 147 ERPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|172065001|ref|YP_001815713.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171997243|gb|ACB68160.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MC40-6]
Length = 373
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHGW Y+ D G+C +P +L N +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRDRLPN-GVRAYPCREAHGLIFVFPGD----ATLAD 146
Query: 332 LLPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P E + E+ + + +NL+D+ H F H +
Sbjct: 147 ERPFPALESADDRAFKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|349688384|ref|ZP_08899526.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 350
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 127/306 (41%), Gaps = 44/306 (14%)
Query: 212 TRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV 271
T L W+PVA +L D + + P V++R DGI + C HR PL +G
Sbjct: 26 TILARCWYPVALVRELGDQPLG-VTLLDAPLVVYRAGDGI-VIADDLCPHRGVPLSMGKG 83
Query: 272 NEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFEQEGMIWIW---PGDEP 324
+ + C YHG+ + GKC ++P S + +++ P E+ G+IW GD P
Sbjct: 84 DGQTVACAYHGFRFGGQGKCVRVPAHPDSAIPSKLNLRTYPAVERYGLIWTCLRPEGDTP 143
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
+P P +I+ + ++ G ++ +D+AH F HT TFA + VP
Sbjct: 144 AIPPMPHWDDPDYQQINCPWI-DIAGFAGRQVEGFIDVAHFAFVHTDTFADPENPVVPPY 202
Query: 383 VKFLTPASGLQGYWDP----YPID------------MEFRPPCMVLSTIGISKPGKLEGQ 426
+TP G + + YPI FR ++T+ I P
Sbjct: 203 KTRITP-DGFEAEYRSSVGNYPIGKSDRGRPGFEWLRHFRVHVPFVATLEIHFP-----D 256
Query: 427 NTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLR 486
N R L ++ P S ++TR+ M +F K +P F +V ED
Sbjct: 257 NGR-----LVIMNAASPVSARQTRMFAPMCRNFD---KDLPLQDVY--DFNLKVFEEDRA 306
Query: 487 LVLGQQ 492
LV Q+
Sbjct: 307 LVEAQK 312
>gi|347761781|ref|YP_004869342.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
gi|347580751|dbj|BAK84972.1| ring-hydroxylating dioxygenase ferredoxin subunit
[Gluconacetobacter xylinus NBRC 3288]
Length = 382
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 186 KQSLDIVKGKLPRKSLNVSGPVQPYNTRL----KNFWFPVAFSTDLKDDTMVPFDCFEEP 241
KQS + + L S+ S PV + R +FW+PVA+S +LK + +P
Sbjct: 4 KQSRETMDQSLSPDSMQSSAPVTGRDLRRIRANPDFWYPVAWSRELKPGKTIGTRYAGQP 63
Query: 242 WVIFRGKDGIPGCV---QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP--- 295
+ R +G G V ++ CAHR PL G+V +QC YHGW Y G+C +P
Sbjct: 64 IALVRPLEG--GSVFALEDRCAHRQVPLSKGTVKGDSVQCCYHGWAYGRSGRCIDVPYLG 121
Query: 296 STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
+L N +++ P E +G+I+I+PGD T P
Sbjct: 122 KGKLPN-GVRTYPVREVDGLIFIFPGDVTKAETTP 155
>gi|89054066|ref|YP_509517.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863615|gb|ABD54492.1| vanillate O-demethylase oxygenase subunit [Jannaschia sp. CCS1]
Length = 346
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A+ +++ D + E +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVRTD-LQQIMVLGEKICMFRTQSGDLVALEDACPHRKLPLSKGRIKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG ++ G C P N ++ + P E+ G+IWIW G+ P
Sbjct: 62 DTVECGYHGLTFNCAGTCVWAPGASGIPSNARVHAYPLAEKYGLIWIWMGN-------PA 114
Query: 332 LLPPSG-FE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L PS FE I+ MEL + L+ DNLLD H + H S+FA
Sbjct: 115 LADPSDIFEIENYGNPDWGINRGAAMELDCNYLLMCDNLLDPTHVAWVHQSSFA 168
>gi|21241085|ref|NP_640667.1| vanillate O-demethylase oxygenase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21106382|gb|AAM35203.1| vanillate O-demethylase oxygenase subunit [Xanthomonas axonopodis
pv. citri str. 306]
Length = 350
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 135/337 (40%), Gaps = 54/337 (16%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDC--FEEPWVIFR-GKDGIPGCVQNTCAHRACPLHLG 269
RL W VA S+++ + PF +EP V++R G + + ++ C HR PL +G
Sbjct: 21 RLAQHWHAVALSSEVSE---APFKATLLDEPLVLYRLGSELV--AARDVCPHRGVPLSMG 75
Query: 270 SVNEGRIQCPYHGWEYSTDGKCEKMPSTQLRNV----KIKSLPCFEQEGMIWIWPGDEPP 325
+ + G + C YHG + G+C +P++ +N+ ++ + E+ G+IW+
Sbjct: 76 TADGGGVVCAYHGLRFGAGGRCNHIPASPSQNIPAKMRLHTYAVAERYGLIWVCLAKPAG 135
Query: 326 TATIPCLLPP------SGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK--GW 377
+ +PP GF+ ++ L+ +D+AH F T+TFA+
Sbjct: 136 VSDADIQIPPMPGWDEDGFQQIVCPAFDIGGSAARQLEGFIDVAHFAFVRTATFAQPDKR 195
Query: 378 SVPSLVKFLTPASGLQGYWDP---YPIDM---------------EFRPPCMVLSTIGISK 419
VP+ TP Y Y +DM E P TI
Sbjct: 196 EVPAYTTTETPTGFNADYLSTVANYSVDMPLPDVDPNFQWLRHFEVHLPFTATLTIHFPV 255
Query: 420 PGKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQ 479
PGK L ++ P S+ TRLL ++ +F + H+P F +
Sbjct: 256 PGK-----------RLVIMNAASPVSKHTTRLLVPIARNFDT---HLPVEDV--HAFNLR 299
Query: 480 VLNEDLRLVLGQQERMNNGANVWNLPVGYDKLGVRYR 516
V ED +V Q+ + + + D+ + YR
Sbjct: 300 VFEEDRAMVEAQRPEYLPLDPLLEVHIPADRSSIAYR 336
>gi|299532048|ref|ZP_07045443.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298719963|gb|EFI60925.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 324
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 22/173 (12%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCF--EEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
+ W PVA S+++ PF E+P V++R +G+ + C HR L +G V
Sbjct: 4 RTLWHPVAQSSEV---VSAPFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVE 60
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPS----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
G ++CPYHGW++S+ G+C K+P+ T + ++++ E G+IW+ EP +
Sbjct: 61 NGHLECPYHGWQFSSGGQCVKVPAVPDFTPPASQRVRAFEVQEAYGLIWV--RLEPSDSQ 118
Query: 329 IPCLLPPSGFEIHAEIVMELPIEHGL----LLDNLLDLAHAPFTHTSTFAKGW 377
+P + + H V P + +++N LD++H F H +GW
Sbjct: 119 LPVFAAET--DEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVH-----EGW 164
>gi|124023142|ref|YP_001017449.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9303]
gi|123963428|gb|ABM78184.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9303]
Length = 436
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ V S LK + + + EP VI+R K+ P C++++C HR+ G G I
Sbjct: 20 WYSVCASQLLKQNELYHLSMYNEPLVIYRDKENKPRCIKDSCPHRSASFRGGESKNGEII 79
Query: 278 CPYHGWEYST----DG----KCEKMPSTQLRN----VKIKSLPCFEQEGMIWIWPGDEPP 325
CPYHG Y+T DG C + + N + ++ PC EQ I+I+ E
Sbjct: 80 CPYHGARYTTSCNQDGFDRITCNHIVDSDYDNFAKYLHLRQYPCVEQGDYIYIYYTGEAK 139
Query: 326 TATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST-FAKGWS 378
T+ P+ F+I++E+ LP +G DLA + F F WS
Sbjct: 140 TS-------PNDFKINSELEPSLPETYG------FDLADSKFEEVFIDFKCDWS 180
>gi|295702951|ref|YP_003596026.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium DSM
319]
gi|294800610|gb|ADF37676.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium DSM 319]
Length = 335
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 120/330 (36%), Gaps = 47/330 (14%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L W P A+S D+ D + EE V+FR + I ++ C HR L LG V +
Sbjct: 7 LAKEWLPAAYSHDVTDQPL-QVTILEERVVLFRTTNAIKA-FKDLCIHRGAALSLGKVVD 64
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS-----TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTAT 328
I CPYHGW+Y G C K+P K + C E+ G+IW+ E
Sbjct: 65 DCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMNSEAGDTP 124
Query: 329 IPCLLP--PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG---------- 376
+P SGF+ L +++N LD++H F H +
Sbjct: 125 LPLYDEHLNSGFKTVCASPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYAEIPDYKV 184
Query: 377 -WS----VPSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQC 431
W V + A G + Y RP L + +
Sbjct: 185 HWKDNRYVSDEIAVYADADGTGNFATIYYTFEILRPTVARLKKV------------NHET 232
Query: 432 ATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPF---MQYLWRHFAEQVLNEDLRLV 488
L LP +K+ + FA V ++ F QY +R F + ++ +D +V
Sbjct: 233 GEIFSMLFAVLPEEERKSTV-------FALVSRNYSFDAPDQY-FRDFQQLIIEQDTSIV 284
Query: 489 LGQQERMNNGANVWNLPVGYDKLGVRYRLW 518
Q+ L + D+L + YR W
Sbjct: 285 ESQKPEELPLDLQAELHLNPDRLSIAYRRW 314
>gi|291445392|ref|ZP_06584782.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
gi|291348339|gb|EFE75243.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
Length = 374
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA S ++ + + E ++R K G +++ CAHR PL +G V+
Sbjct: 46 DFWYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMGVVDGET 105
Query: 276 IQCPYHGWEYSTDGKCEKMPSTQLRNVK----IKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YH W Y DG+ ++P + + +++ P E G+++++PGD P A +
Sbjct: 106 LRCCYHAWAYRGDGRISQIPYLAKGDARPPRGVRAYPVREAYGLVFVFPGD-PEKAEVTP 164
Query: 332 L--LPPSGFEIHAEIVMELPI--EHGLLLDNLLDLAHAPFTHTSTFAK 375
L +P + + + + L +NLLD+ H F H K
Sbjct: 165 LPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNHQ-FLHRGVVGK 211
>gi|289768563|ref|ZP_06527941.1| oxidase [Streptomyces lividans TK24]
gi|289698762|gb|EFD66191.1| oxidase [Streptomyces lividans TK24]
Length = 370
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPS--TQLR 300
V++R DG C C H+ L G + I+CPYHG+ Y DG C +P+ ++ R
Sbjct: 6 VLWRDIDGNLVCQGARCPHKGANLGDGRMKGNTIECPYHGFRYGADGACRVIPAMGSEAR 65
Query: 301 ---NVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGF----EIHAEIVMELPIEHG 353
++++ + P EQ G++W+W GDE PTA +P + P+ +++A P+ +
Sbjct: 66 IPGSLRVPTYPVREQFGLVWMWWGDERPTADLPPVAAPAEVTDNRKLYATKRWTRPVHYT 125
Query: 354 LLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPAS-GLQG 394
+++LL+ H + H + + L+ + TP+ GL G
Sbjct: 126 RYIESLLEFYHVTYVHRDHWFN--YIDYLLLYGTPSKFGLDG 165
>gi|254559235|ref|YP_003066330.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
gi|254266513|emb|CAX22277.1| putative rieske 2Fe-2S family protein [Methylobacterium extorquens
DM4]
Length = 361
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 41/346 (11%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L N W+ ++ + M E V+ R KDG +++ C HR L G +
Sbjct: 24 LSNAWYCAGRASAVAGGKMRAVALNGEQVVLGRAKDGSLFALRDRCPHRGMALSKGKFDG 83
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS------TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTA 327
+ CP+HGW + TDG+C +P+ + + ++ P E G +W+ P P
Sbjct: 84 DTLMCPFHGWRFGTDGRCRDVPTLSAHDASDFSRIAVQRFPIVESAGFLWVNPHLGPSDP 143
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLD--NLLDLAHAPFTH-TSTFAKGWSVPSLVK 384
+P FE +V+EL +E L +L+D H F H T F + VK
Sbjct: 144 GAVPAVPSLDFEPAGCLVLELEVEASFDLTTLSLVDPGHVAFVHDTWWFRPSKELREKVK 203
Query: 385 FLTP--------------ASGLQGYWDPYP-IDMEFRPPCMVLSTIGISKPGKLEGQNTR 429
P +S + P +++EFR P + L I K G T+
Sbjct: 204 TFQPVPHGFVMTSHATTTSSPVYRLLGGAPEVEIEFRLPGVRLERI---KAG------TK 254
Query: 430 QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVL 489
+ A + + P+ T LY S+ ++LK P + L R F L +D +++
Sbjct: 255 RVANYTFATPMG-PNRTMLTNALY-WSMPALNLLK--PIARPLMRQF----LTQDQQVLQ 306
Query: 490 GQQERMNNGANVWNLPVGYDKLGVRYRLWRDALEKGAKQLPFMKPM 535
Q ++ + L G +RL R+ALE + PF P+
Sbjct: 307 HAQAGLDRKPTMVLLGQGDLPSQWYFRLKREALEAARESRPFANPL 352
>gi|296115924|ref|ZP_06834547.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295977496|gb|EFG84251.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 354
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 131/312 (41%), Gaps = 27/312 (8%)
Query: 196 LPRKSLNVSGPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCV 255
LPR N++ V +N L W+PVA DL + + P VI+R +G
Sbjct: 17 LPR---NMTFDVDDWNI-LARCWYPVALVRDLGAQPLS-MTLLDAPLVIYRAGEGDIVIA 71
Query: 256 QNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQLRNVKIKSLPCFE 311
+ C HR PL +G + + C YHG+ + G+C ++P S + +++ P E
Sbjct: 72 DDLCPHRGVPLSMGKGDGQTVACAYHGFRFGAQGRCVRVPAHPDSAIPSKLNLRTYPVVE 131
Query: 312 QEGMIWIW---PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
+ G+IW G+ P +P PS +I+ + ++ G ++ +D+AH F
Sbjct: 132 RYGLIWTCLRPEGEMPEIPPMPHWDDPSYQQINCPWI-DIAGFAGRQVEGFIDVAHFAFV 190
Query: 369 HTSTFA--KGWSVPSLVKFLTPASGLQGYWDP----YPIDM--EFRPPCMVLSTIGISKP 420
HT TFA + VP LTP G + + YPI + RP L + P
Sbjct: 191 HTDTFADPENPVVPPYRTRLTP-DGFEAEYRSNVGNYPIGVTDRGRPGFEWLRHFRVHVP 249
Query: 421 GKLEGQNTRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQV 480
+ L ++ P S +KTR+ M +F K +P F +V
Sbjct: 250 FTATLEIHFPDNGRLVIMNAASPVSARKTRMFAPMCRNFD---KELPLQDVY--DFNLRV 304
Query: 481 LNEDLRLVLGQQ 492
ED LV Q+
Sbjct: 305 FEEDRALVEAQR 316
>gi|168059614|ref|XP_001781796.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666703|gb|EDQ53350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 92/222 (41%), Gaps = 22/222 (9%)
Query: 215 KNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE- 273
+N W+PV+ DL PF V+++ G + C HR PL G ++E
Sbjct: 28 RNHWYPVSTIEDLDPSVPTPFQLLGRELVVWKDNQGEWRVFVDKCPHRLAPLSEGRLDES 87
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK----------SLPCFEQEGMIWIWP--- 320
G +QC YHGW ++ DG C +P + K S P +G++++WP
Sbjct: 88 GMLQCSYHGWSFNGDGSCGAIPQAAKEGPEAKARFSPRACAASYPTRVSQGLLFVWPDEK 147
Query: 321 GDEPPTATIPCLLPPSGFEIHAEIVM---ELPIEHGLLLDNLLDLAHAPFTHTSTFAKGW 377
G E +A P +LPP + V +L + L++N+ D +H F H +
Sbjct: 148 GWEKASAATPPMLPPEFSDPRFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRE 207
Query: 378 SVPSLVKFLTPASGLQGYW----DPYPIDMEFRPPCMVLSTI 415
L F SG G+ D I F PPC + I
Sbjct: 208 RAKPL-PFKVHKSGPWGFTGANNDSPTISCGFYPPCYYYNKI 248
>gi|33863046|ref|NP_894606.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9313]
gi|33634963|emb|CAE20949.1| Rieske iron-sulfur protein 2Fe-2S subunit [Prochlorococcus marinus
str. MIT 9313]
Length = 436
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 25/181 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQ 277
W+ V S LK++ + F EP VI+R K+ P C++++C HR+ G G I
Sbjct: 20 WYSVCASKLLKENELYHLSMFNEPLVIYRDKNNKPRCIKDSCPHRSASFRGGENENGEIV 79
Query: 278 CPYHGWEYST----DGK----CEKMPSTQLRN----VKIKSLPCFEQEGMIWIW------ 319
CPYHG ++T DG C+ + + N + ++ PC EQ I+I+
Sbjct: 80 CPYHGGRFTTSCNQDGSDRITCKHIIDSHYDNFANHLHLRQYPCVEQGDYIYIYYTGEAQ 139
Query: 320 --PGDEPPTATIPCLLPPS-GFEI----HAEIVMELPIEHGLLLDNLLDLAHAPFTHTST 372
P D + + LP + GF++ + E+ ++ + +++N LD+ H + H +T
Sbjct: 140 PSPNDFQIKSHLENSLPEAYGFDLKDYEYEEVFIDFKCDWSRIIENHLDILHIFWLHGNT 199
Query: 373 F 373
Sbjct: 200 L 200
>gi|349687941|ref|ZP_08899083.1| Rieske (2Fe-2S) domain-containing protein [Gluconacetobacter
oboediens 174Bp2]
Length = 437
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 10/169 (5%)
Query: 209 PYNTRLKNFWFPVAFSTDLKDDTMV-PFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLH 267
P T L+ +W PVA S +L+ + P + V+FR + G G + C HR L
Sbjct: 18 PAGTLLRRYWQPVALSDELEGKRPIRPARLLGQDLVVFRDESGRLGVLDRDCPHRGADLA 77
Query: 268 LGSVNEGRIQCPYHGWEYSTDGKCEKMP-----STQLRNVKIKSLPCFEQEGMIWIWPGD 322
G + +G ++CP+HGW + G+C + P S ++ +S P E+ G+I+ + G+
Sbjct: 78 FGRLEDGGLRCPFHGWLFDAQGQCLETPAEPAGSRLCGKIRQRSYPVVEKSGIIFTYLGE 137
Query: 323 EPPTA--TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
P A + C P + +ME L + +D AHA F H
Sbjct: 138 GAPPAFPALDCFQAPDSHVFAFKGLMECNWLQALEVG--IDPAHASFLH 184
>gi|163745312|ref|ZP_02152672.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382130|gb|EDQ06539.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
Length = 346
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A+ ++ + + E +FR + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWDHEVTRE-LQQITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHG + G+C P T N K+ + P E+ G++WIW G+ P
Sbjct: 62 DTVECGYHGLTFDCAGQCVWAPGTGRIPSNAKVHAYPLHEKYGLVWIWMGN-------PA 114
Query: 332 LLPPSG-FE----------IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP 380
L PS FE I+ MEL + L+ DNLLD H + H S+FA +
Sbjct: 115 LADPSDIFEIENYDNPDWGINRGEAMELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKD 174
Query: 381 SLVKFLTPASGL 392
+ ++ G+
Sbjct: 175 TPLRITKTEEGI 186
>gi|399154200|ref|ZP_10754267.1| iron-sulfur protein [gamma proteobacterium SCGC AAA007-O20]
Length = 456
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 85/186 (45%), Gaps = 15/186 (8%)
Query: 205 GPVQPYNTRLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRAC 264
G P L+ +W PV S+DL + V E V+FR K G G V C HR
Sbjct: 34 GRGTPAGEYLRRYWQPVFISSDLTE-LPVAIKILGEELVLFRDKSGQLGLVHKHCPHRQA 92
Query: 265 PLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP------STQLRN-VKIKSLPCFEQEGMIW 317
L G E IQC YHGW Y DG ++P + ++N V++ + P FE +G+I+
Sbjct: 93 SLEFGICREKGIQCCYHGWHYDVDGTLIEVPGQPTATADMIKNKVRLGAYPTFEFKGLIF 152
Query: 318 IW--PGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLL--LDNLLDLAHAPFTHTSTF 373
+ P DE P I L FE + + P L LD ++D H F H++
Sbjct: 153 AYLGPIDEKPEFPIYDSLE---FEDMEMVPYKAPFNCNWLQVLDAIVDPIHTAFLHSNMS 209
Query: 374 AKGWSV 379
+ +SV
Sbjct: 210 RQQFSV 215
>gi|114769251|ref|ZP_01446877.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
gi|114550168|gb|EAU53049.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
Length = 346
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 9/170 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
LKN W+ A++ ++ + + + IF+ + G +++ C HR PL G +
Sbjct: 3 LKNAWYVAAWADEVTHN-LQQITVLNQKICIFKSQSGDFVALEDACPHRKLPLSKGRIKG 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQL--RNVKIKSLPCFEQEGMIWIWPG-----DEPPT 326
++C YHG + GKC P N K+ S P E+ G+IWIW G D
Sbjct: 62 DTVECGYHGLTFDCSGKCVWAPGQGNIPSNAKVHSYPLHEKYGLIWIWMGNSALADHHDI 121
Query: 327 ATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
I PS + I+ MEL + L+ DNLLD H + H +F +
Sbjct: 122 FEIKNYNDPS-WGINRGDAMELECNYLLMCDNLLDPTHVAWVHAGSFGQA 170
>gi|387905859|ref|YP_006336196.1| Vanillate O-demethylase oxygenase subunit [Burkholderia sp. KJ006]
gi|387580751|gb|AFJ89465.1| Vanillate O-demethylase oxygenase subunit [Burkholderia sp. KJ006]
Length = 373
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 11/168 (6%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVDGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMPSTQLRNV--KIKSLPCFEQEGMIWIWPG-----DEPPTA 327
++C YHGW Y+ D G+C +P + +++ PC E G+I+++PG DE P
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRERLPNGVRAYPCRETHGVIFVFPGDATLADERPVP 151
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
+ P+ ++ E+ + + +NL+D+ H F H +
Sbjct: 152 ALESADNPA-YKTR-RFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|329891293|ref|ZP_08269636.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846594|gb|EGF96158.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
Length = 397
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 36/218 (16%)
Query: 178 TCASPSTSKQSLDIVKGKLPRKSLNVSGPVQPYNTR-LKNFWFPVAFSTDLKDDTMVPFD 236
T A P K ++ P + P + + + W+ VA + D+ ++ ++
Sbjct: 16 TAARPCCYKAAMIADAAPAPSATPEAKAPPTAFGKGFITDAWYFVALARDVPVASLKRYE 75
Query: 237 CFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSV----NEGR-IQCPYHGWEYSTDGKC 291
EP +I R + G +++ C HRA PL G + EG I+CPYHGW + DG C
Sbjct: 76 IMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVEKPGEGETIECPYHGWRFRPDGVC 135
Query: 292 EKMPST------QLRNVKIKSLPCFEQEGMIWIW----------PGDEPP----TATIPC 331
+PS + +K++ P E +GM+++W P EPP + P
Sbjct: 136 AAIPSLVEDQAFEANRIKVRVYPVRESQGMVFVWMAADARNPSEPDQEPPQFPGAVSQPR 195
Query: 332 LLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTH 369
L+ F+ H I+H ++ L+D AH P+ H
Sbjct: 196 LVEWMDFDSH--------IDHAVV--GLMDPAHGPYVH 223
>gi|302794127|ref|XP_002978828.1| hypothetical protein SELMODRAFT_177205 [Selaginella moellendorffii]
gi|300153637|gb|EFJ20275.1| hypothetical protein SELMODRAFT_177205 [Selaginella moellendorffii]
Length = 547
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 32/237 (13%)
Query: 218 WFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE-GRI 276
W+PV+ DL PF V+++ +G + C HR PL G ++E G +
Sbjct: 94 WYPVSLVEDLDPKAATPFKLLGREIVVWKDGEGNWRAFSDQCPHRLAPLSEGRIDENGWL 153
Query: 277 QCPYHGWEYSTDGKCEKMPSTQLRNVKIK----------SLPCFEQEGMIWIWP---GDE 323
QC YHGW + DG C K+P + + K + P +G++++WP G E
Sbjct: 154 QCSYHGWSFKGDGSCGKIPQAATQGPESKAVASPRACAITFPAVVSQGLLFVWPDEKGWE 213
Query: 324 PPTATIPCLLP-----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWS 378
T P LP PS + I +L + L++N+ D +H F H K
Sbjct: 214 SAQRTQPPQLPAVFDDPSFSTV--TIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGK--- 268
Query: 379 VPSLVKFLTPASGLQGYW-------DPYPIDMEFRPPCMVLSTIGISKPGKLEGQNT 428
K LT +G W D I EF PC ++ I I L+G T
Sbjct: 269 -RDRAKPLTFKVDSRGPWGFSGANSDTPKITAEFLAPCYYINKIEIPLTLPLQGPKT 324
>gi|149921995|ref|ZP_01910437.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149817160|gb|EDM76640.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 368
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 83/202 (41%), Gaps = 32/202 (15%)
Query: 218 WFPVAFSTDL---KDDTMVPFDCFE--EPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
W+P+A STDL P WV++R + G C+ C HR L G V
Sbjct: 25 WYPIAPSTDLPARGRRATKPLGIMRLGRRWVLWRDEAGAVACMPAACPHRGADLAQGRVR 84
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQL-----RNVKIKSLPCF-EQEGMIWIWPGDEPPT 326
+G I+CPYHG+ +S G+C +P + ++ P E G+IW+W G+ PT
Sbjct: 85 QGEIECPYHGFRWSAGGECVALPCEGRGARVPAKLHVRERPIVREAHGLIWMWYGEREPT 144
Query: 327 ATIPCL--LPPSGFE--IHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSL 382
A +P P G H E+ + ++ + DL H PF H
Sbjct: 145 AQLPWFERSPVEGRRTATHTEV---WEVSFTRTMEAMQDLHHFPFAHHG----------- 190
Query: 383 VKFLTPASGLQGYWDPYPIDME 404
L P G DPY +E
Sbjct: 191 ---LDPWRGKAARLDPYECRVE 209
>gi|171320516|ref|ZP_02909543.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
gi|171094236|gb|EDT39316.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
Length = 373
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+ W+P+A+S +LK + +P V+ R + G +++ CAHR PLH G V+
Sbjct: 32 DHWYPLAWSRELKRGKTLGVRFAGDPIVLVRTESGAVYALEDRCAHRQVPLHAGVVSGET 91
Query: 276 IQCPYHGWEYSTD-GKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++C YHGW Y+ D G+C +P +L N +++ PC E G+I+++PGD AT+
Sbjct: 92 LRCCYHGWTYACDSGRCVDVPYLGRDRLPN-GVRAYPCREAHGLIFVFPGD----ATLAD 146
Query: 332 LLPPSGFEIHAEIVM-------ELPIEHGLLLDNLLDLAHAPFTHTSTFAK 375
P E + E+ + + +NL+D+ H F H +
Sbjct: 147 ERPFPALESADDRAYKTRRFGREVKCHYSFMHENLMDMNHQ-FLHRKQMGQ 196
>gi|399017736|ref|ZP_10719925.1| Rieske (2Fe-2S) domain-containing protein [Herbaspirillum sp.
CF444]
gi|398102503|gb|EJL92683.1| Rieske (2Fe-2S) domain-containing protein [Herbaspirillum sp.
CF444]
Length = 366
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+++ W+ A S ++ D ++ + +++R DG P +QN CAHR+ PL G ++
Sbjct: 19 IRDCWYVAALSGEVTRD-LLERTLLGKTVLMYRKLDGTPVVMQNRCAHRSFPLSKGRLDG 77
Query: 274 GRIQCPYHGWEYSTDGKCEKMPS--TQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIPC 331
++ C YHG Y+ +G+C MPS + +I S P E+ +IWIW GD P
Sbjct: 78 DQVVCGYHGMAYNPEGQCVHMPSLANPPTHARIASYPVQERGPLIWIWMGDA--AKADPA 135
Query: 332 LLPPSGFEIHAEIV-----MELPIEHGLLLDNLLDLAHAPFTHTSTFA 374
L+P + + E + + + +NLLD H P H T
Sbjct: 136 LIPDTSWLDAPEWTTVTGYFHMKSNYVAMHENLLDQTHFPILHADTVG 183
>gi|379011985|ref|YP_005269797.1| hypothetical protein Awo_c21320 [Acetobacterium woodii DSM 1030]
gi|375302774|gb|AFA48908.1| hypothetical protein containing a rieske (2Fe-2S) domain
[Acetobacterium woodii DSM 1030]
Length = 322
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 8/170 (4%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
+KN W+ + S ++K + + E V++R + G C+ + C HR L G++
Sbjct: 2 IKNQWYGILNSNEIKKNKLTGVTRMGEKLVLWRDETGAVKCIFDQCCHRGASLSAGTLVH 61
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR-----NVKIKSLPCFEQEGMIWIWPGD-EPPTA 327
I+CP+HG+ Y G+ ++P+ + + K+ + E+ G IW+W G +
Sbjct: 62 DTIKCPFHGFSYDGTGRVVQIPANGKKAPVPEHFKVNAYVVKEKYGFIWLWYGAFQEVLP 121
Query: 328 TIPCL-LPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFAKG 376
IP +GF + P+ + ++N LD+ H PF H ++ +G
Sbjct: 122 EIPFFEYLRTGFS-YGSFSEVWPVHYTRAIENQLDVVHLPFVHANSIGRG 170
>gi|330994111|ref|ZP_08318040.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
gi|329758848|gb|EGG75363.1| Vanillate O-demethylase oxygenase subunit [Gluconacetobacter sp.
SXCC-1]
Length = 390
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 216 NFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGR 275
+FW+PVA+S DL+ D + P V+ R ++G + + C HR PL G+VN
Sbjct: 42 DFWYPVAWSADLRKDKTLAVSYAGTPIVLVRPEEGSVFALYDRCPHRQVPLSKGTVNGQT 101
Query: 276 IQCPYHGWEYSTDGKCEKMP---STQLRNVKIKSLPCFEQEGMIWIWPGDEPPTATIP 330
++C YHGW + G+C +P +L N +++ P E G+I+++PG+ T+P
Sbjct: 102 VRCCYHGWAFGRSGRCIDVPYLGKGKLPN-GVRTFPVREAGGLIFVFPGNPEKADTVP 158
>gi|238026710|ref|YP_002910941.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
glumae BGR1]
gi|237875904|gb|ACR28237.1| Iron-sulfur cluster-binding protein, Rieske family [Burkholderia
glumae BGR1]
Length = 345
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 29/307 (9%)
Query: 214 LKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVNE 273
L+ FW+PVA + D+ D + E ++R + G V++ C HR+ L G V++
Sbjct: 9 LRRFWYPVARAVDVTDAPLA-VTLLGEALALWRTGENEFGVVKDKCPHRSARLSGGWVDQ 67
Query: 274 GRIQCPYHGWEYSTDGKCEKMPSTQLR----NVKIKSLPCFEQEGMIWIWPGDEP--PTA 327
G++ CPYHGW Y+ G C ++P + + + C + G IW+ DEP
Sbjct: 68 GKLVCPYHGWTYNGVGACVRIPQMPQKKPSEKIVVDHYRCKTKYGYIWV-ALDEPIHDIP 126
Query: 328 TIPCLLPPSGFEIHAEIVMELPIEHGL-LLDNLLDLAHAPFTHTSTFAKG-WSVPSLVKF 385
P + IH ME+ GL +L+N LD +H F H TF P+ ++
Sbjct: 127 DFPEAADAGFYRIHE--FMEVWNCSGLRILENGLDNSHFAFVHRKTFGLAEMPEPAPARY 184
Query: 386 LTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQNTRQCATHLHQLHVCLPSS 445
+G Y D+ P + +GI A ++ + P+
Sbjct: 185 EDTETGFNMY-----SDVLVNNPGLQKDNLGIGSEQTTRYMEHNWFAPFGRRMRIQYPNG 239
Query: 446 RKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRLVLGQQERMNNGANV---- 501
T + + ++ L F+Q+ +R+ A++ N DL ++ + N V
Sbjct: 240 LVHTIITWATPINDRQSL----FVQFAFRNDADR--NPDLDDIVAWDRAVTNEDRVILET 293
Query: 502 --WNLPV 506
W+ P+
Sbjct: 294 TDWDTPL 300
>gi|449452795|ref|XP_004144144.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 481
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 146/364 (40%), Gaps = 71/364 (19%)
Query: 218 WFPVAFSTDLKD-----------DTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPL 266
W+PV DL D +V +D E W +F ++C HR PL
Sbjct: 25 WYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVF----------DDSCPHRLAPL 74
Query: 267 HLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIKS--------LPCFEQEGMIW 317
G +++ GR+QC YHGW ++ G C+ +P + S P Q G++W
Sbjct: 75 SEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVYPSTTQNGIVW 134
Query: 318 IWPGDEPPTATI-----PCLLP----PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFT 368
WP +P I P +P PS ++ M E +L++NL+DLAH P+
Sbjct: 135 FWPNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGYE--VLIENLMDLAHLPYA 192
Query: 369 H-----------TSTFAKGWSVPSLVKFLTPASGLQG--------YWDPYPIDMEFRPPC 409
H S +G + +V+ L A G G ++ P + F P
Sbjct: 193 HYGIMPAPPPMKNSDRERGRPLEMVVEKLK-ADGFVGKDETLRHKFFAPC-VYYYFTDPE 250
Query: 410 MVLSTIGISKPGKLEGQNTR---QCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHV 466
+V + K G + + + + C+P S K+RL++ ++ + H
Sbjct: 251 LVQGNVESKKDGSVSSTANKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWV-HF 309
Query: 467 PFMQYLWRHFAEQVLNEDLRLVLGQQERMNN-GANVWN----LPVGYDKLGVRYRLWRDA 521
++++ +L+ D+ L+ ++ + G + W+ +PV D V +R W +
Sbjct: 310 IVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGPSNWHKACYVPVKSDAFVVGFRRWLNK 369
Query: 522 LEKG 525
G
Sbjct: 370 YAGG 373
>gi|423119627|ref|ZP_17107311.1| hypothetical protein HMPREF9690_01633 [Klebsiella oxytoca 10-5246]
gi|376398281|gb|EHT10908.1| hypothetical protein HMPREF9690_01633 [Klebsiella oxytoca 10-5246]
Length = 345
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 131/309 (42%), Gaps = 44/309 (14%)
Query: 213 RLKNFWFPVAFSTDLKDDTMVPFDCFEEPWVIFRGKDGIPGCVQNTCAHRACPLHLGSVN 272
RL W PVA + D+ V +E VI+R K + ++ C HR PL LG +
Sbjct: 21 RLARCWHPVARAEDIGA-APVKAVLLDEQLVIYRVKGQV-VVARDVCPHRGVPLTLGFHD 78
Query: 273 EGRIQCPYHGWEYSTDGKCEKMPSTQLRNVKIK-SLPCF---EQEGMIWI---WPGDEP- 324
I CPYHG + DG C ++PS+ R V K +L C+ E+ G+IW + + P
Sbjct: 79 GEGIVCPYHGLRFGEDGLCNRIPSSPDRPVPAKLNLTCYAVEERYGLIWTCLAFDAENPM 138
Query: 325 PTATIPCLLPPSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTSTFA--KGWSVPSL 382
P T+P GF+ E+ G ++ LD+AH + HT TFA VP
Sbjct: 139 PLPTLP-HWDDEGFQQINCPGFEVNGFAGRQVEGFLDVAHFAWIHTDTFADPDNQLVPDY 197
Query: 383 VKFLTPASGLQGYWDP---YPIDMEFRPP------------CMVLSTIGISKPGKLEGQN 427
+ TP YW YP EFR P +T+ I PG+
Sbjct: 198 IPQETPFGFTADYWSSVGNYPASSEFRAPDGFQWLRHFELHLPFTATLTIHFPGE----- 252
Query: 428 TRQCATHLHQLHVCLPSSRKKTRLLYRMSLDFASVLKHVPFMQYLWRHFAEQVLNEDLRL 487
L ++ P S + TR+ ++ +F HVP + F +V ED +
Sbjct: 253 -----ARLVIMNAASPVSSRVTRMFAPIARNFD---LHVPVEEV--HAFNLRVFEEDRLM 302
Query: 488 VLGQQ-ERM 495
V Q+ ER+
Sbjct: 303 VETQRPERL 311
>gi|145590685|ref|YP_001152687.1| Rieske (2Fe-2S) domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282453|gb|ABP50035.1| Rieske (2Fe-2S) domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 326
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 243 VIFRGKDGIPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMP----STQ 298
V +R G + + C HR L LG V G+IQCPYHG+E+ GK K+P S +
Sbjct: 27 VFWRDDSGRIHALLDDCPHRRARLSLGKVVGGKIQCPYHGFEFDGSGKVIKIPALGRSAK 86
Query: 299 L-RNVKIKSLPCFEQEGMIWIWPGDEPPTATIPCLLPPSGFEIHAEIVMELPIEHGLLLD 357
L +K S+P ++ ++W+W G P G E ++E + ++
Sbjct: 87 LPEYLKAFSMPVYDAYDIVWVWYGGGEPRGAPRFFEDLEGLEAYSEYSEVWGVSLPRAVE 146
Query: 358 NLLDLAHAPFTHTSTFAKG 376
N LD+ H PF H +T +G
Sbjct: 147 NQLDVFHLPFVHYNTIGRG 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,895,437,078
Number of Sequences: 23463169
Number of extensions: 385631935
Number of successful extensions: 785595
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2540
Number of HSP's successfully gapped in prelim test: 3386
Number of HSP's that attempted gapping in prelim test: 776175
Number of HSP's gapped (non-prelim): 6623
length of query: 539
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 391
effective length of database: 8,886,646,355
effective search space: 3474678724805
effective search space used: 3474678724805
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)